BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10117
(135 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|311251063|ref|XP_003124428.1| PREDICTED: rab-like protein 5-like isoform 1 [Sus scrofa]
Length = 185
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 87/132 (65%), Gaps = 3/132 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EYHPTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYHPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H++E+ ++Y FV Q L + +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLTEIEMWYSCFVQQQFLQDTQCLLIA 121
Query: 118 NVKPGRGDSSGH 129
+ KPG G G+
Sbjct: 122 HHKPGSGSDKGN 133
>gi|297680108|ref|XP_002817847.1| PREDICTED: rab-like protein 5 isoform 1 [Pongo abelii]
Length = 185
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDVTEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|75075729|sp|Q4R4K5.1|RABL5_MACFA RecName: Full=Rab-like protein 5
gi|67971256|dbj|BAE01970.1| unnamed protein product [Macaca fascicularis]
Length = 185
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|12232463|ref|NP_073614.1| rab-like protein 5 isoform a [Homo sapiens]
gi|332867843|ref|XP_003318735.1| PREDICTED: uncharacterized protein LOC741533 isoform 2 [Pan
troglodytes]
gi|397471310|ref|XP_003807239.1| PREDICTED: rab-like protein 5 isoform 1 [Pan paniscus]
gi|74733725|sp|Q9H7X7.1|RABL5_HUMAN RecName: Full=Rab-like protein 5
gi|10436496|dbj|BAB14846.1| unnamed protein product [Homo sapiens]
gi|14602615|gb|AAH09823.1| RAB, member RAS oncogene family-like 5 [Homo sapiens]
gi|119570601|gb|EAW50216.1| RAB, member RAS oncogene family-like 5, isoform CRA_a [Homo
sapiens]
gi|119570603|gb|EAW50218.1| RAB, member RAS oncogene family-like 5, isoform CRA_a [Homo
sapiens]
gi|312153284|gb|ADQ33154.1| RAB, member RAS oncogene family-like 5 [synthetic construct]
gi|410208962|gb|JAA01700.1| RAB, member RAS oncogene family-like 5 [Pan troglodytes]
gi|410293326|gb|JAA25263.1| RAB, member RAS oncogene family-like 5 [Pan troglodytes]
Length = 185
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|302564797|ref|NP_001181339.1| rab-like protein 5 [Macaca mulatta]
gi|380815660|gb|AFE79704.1| rab-like protein 5 isoform a [Macaca mulatta]
gi|383420845|gb|AFH33636.1| rab-like protein 5 isoform a [Macaca mulatta]
gi|384948842|gb|AFI38026.1| rab-like protein 5 isoform a [Macaca mulatta]
Length = 185
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ +FN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDAKFESCWPALMKDAHGVVIIFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|221040142|dbj|BAH11834.1| unnamed protein product [Homo sapiens]
Length = 148
Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|403285795|ref|XP_003934196.1| PREDICTED: rab-like protein 5 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 185
Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDPKFESCWPALMKDAHGVVIVFNADIPSHRKETEMWYSCFVQQQSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|296192323|ref|XP_002744009.1| PREDICTED: rab-like protein 5 isoform 1 [Callithrix jacchus]
Length = 185
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPDVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGDPKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|402863104|ref|XP_003895872.1| PREDICTED: rab-like protein 5 isoform 1 [Papio anubis]
Length = 185
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD G+ KFES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI
Sbjct: 62 WDCGGNAKFESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG GD G
Sbjct: 122 HHKPGSGDDKG 132
>gi|426254751|ref|XP_004021040.1| PREDICTED: rab-like protein 5 isoform 1 [Ovis aries]
Length = 185
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 84/127 (66%), Gaps = 3/127 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L N +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQNTQCLLIA 121
Query: 118 NVKPGRG 124
+ KPG G
Sbjct: 122 HHKPGSG 128
>gi|345801185|ref|XP_536853.3| PREDICTED: RAB, member RAS oncogene family-like 5 isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHITSNTKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDTQCLLIA 121
Query: 118 NVKPGRGDSSGH 129
+ KPG G G+
Sbjct: 122 HHKPGSGSDKGN 133
>gi|395842846|ref|XP_003794219.1| PREDICTED: rab-like protein 5 isoform 1 [Otolemur garnettii]
Length = 187
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 84/132 (63%), Gaps = 3/132 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + SK E EL
Sbjct: 4 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNSKGSGCEFEL 63
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ +FN+ +P H E+ ++Y FV Q L + +CLLI
Sbjct: 64 WDCGGDTKFESCWPALMKDAHGVVIIFNADIPSHRKEIEMWYSCFVQQQFLQDTQCLLIA 123
Query: 118 NVKPGRGDSSGH 129
+ KPG G G
Sbjct: 124 HHKPGSGGDKGR 135
>gi|440908424|gb|ELR58438.1| Rab-like protein 5 [Bos grunniens mutus]
Length = 185
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ +Y FV Q L N +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIETWYSCFVQQQFLQNTQCLLIA 121
Query: 118 NVKPGRG 124
+ KPG G
Sbjct: 122 HHKPGSG 128
>gi|62751701|ref|NP_001015612.1| rab-like protein 5 [Bos taurus]
gi|75057793|sp|Q5E9J4.1|RABL5_BOVIN RecName: Full=Rab-like protein 5
gi|59858217|gb|AAX08943.1| RAB, member RAS oncogene family-like 5 [Bos taurus]
Length = 185
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ +Y FV Q L N +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIETWYSCFVQQQFLQNTQCLLIA 121
Query: 118 NVKPGRG 124
+ KPG G
Sbjct: 122 HHKPGSG 128
>gi|296472952|tpg|DAA15067.1| TPA: rab-like protein 5 [Bos taurus]
Length = 185
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ +Y FV Q L N +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIVFNADIPSHLKEIETWYSCFVQQQFLQNTQCLLIA 121
Query: 118 NVKPGRG 124
+ KPG G
Sbjct: 122 HHKPGSG 128
>gi|344289670|ref|XP_003416565.1| PREDICTED: rab-like protein 5-like isoform 1 [Loxodonta africana]
Length = 185
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYYPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ +FN+ P H+ E+ ++Y FV Q L + +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIIFNADTPSHLKEIEMWYSCFVQQQLLQDTQCLLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG G G
Sbjct: 122 HHKPGSGSDRG 132
>gi|21313026|ref|NP_080349.1| rab-like protein 5 [Mus musculus]
gi|81881681|sp|Q9DAI2.1|RABL5_MOUSE RecName: Full=Rab-like protein 5
gi|12838593|dbj|BAB24256.1| unnamed protein product [Mus musculus]
gi|14318710|gb|AAH09150.1| Rabl5 protein [Mus musculus]
gi|148687355|gb|EDL19302.1| RAB, member of RAS oncogene family-like 5 [Mus musculus]
Length = 185
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 84/131 (64%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + C+L+
Sbjct: 62 WDCGGDSKFESCWPALMKDAHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDSHCMLVA 121
Query: 118 NVKPGRGDSSG 128
+ KPG G G
Sbjct: 122 HHKPGSGGERG 132
>gi|348568290|ref|XP_003469931.1| PREDICTED: rab-like protein 5-like isoform 1 [Cavia porcellus]
Length = 184
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 84/130 (64%), Gaps = 2/130 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDT--SKTEIELW 58
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + + E ELW
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPNVASSKGAGCEFELW 61
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D GD KFES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI +
Sbjct: 62 DCGGDAKFESCWPALMKDAHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDSQCLLIAH 121
Query: 119 VKPGRGDSSG 128
KPG G G
Sbjct: 122 HKPGSGGDMG 131
>gi|431898201|gb|ELK06896.1| Rab-like protein 5 [Pteropus alecto]
Length = 178
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 85/129 (65%), Gaps = 3/129 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ +FN+ +P H+ E+ ++Y FV Q L + +CLLI
Sbjct: 62 WDCGGDPKFESCWPALMKDSHGVVIIFNADIPSHLKEIEMWYSCFVQQQFLQDTQCLLIA 121
Query: 118 NVKPGRGDS 126
+ KPG G +
Sbjct: 122 HHKPGSGSA 130
>gi|126314410|ref|XP_001366207.1| PREDICTED: rab-like protein 5-like isoform 1 [Monodelphis
domestica]
Length = 185
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPQVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ +FN+ +P H+ E+ +++ FV Q L +++CLLI
Sbjct: 62 WDCGGDTKFESCWPALMKDSHGVVIIFNADIPSHLKEIEMWHSCFVQQQLLQDNQCLLIA 121
Query: 118 NVKPGRGDSSGH 129
+ KPG G G+
Sbjct: 122 HHKPGSGGDKGN 133
>gi|58865382|ref|NP_001011902.1| rab-like protein 5 [Rattus norvegicus]
gi|81882802|sp|Q5FVJ7.1|RABL5_RAT RecName: Full=Rab-like protein 5
gi|58476859|gb|AAH89940.1| RAB, member RAS oncogene family-like 5 [Rattus norvegicus]
gi|149062983|gb|EDM13306.1| rCG21413, isoform CRA_b [Rattus norvegicus]
Length = 185
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + C+L+
Sbjct: 62 WDCGGDSKFESCWPALMKDAHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDSHCMLVA 121
Query: 118 NVKPGRG 124
+ KPG G
Sbjct: 122 HHKPGSG 128
>gi|351698759|gb|EHB01678.1| Rab-like protein 5 [Heterocephalus glaber]
Length = 185
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSNITEYNPTQGVRILEFENPNVTSNDKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD G+ KFES WPA +D HG++ VFN+ +P H+ E+ +Y FV Q L + +CLLI
Sbjct: 62 WDCGGNAKFESCWPALMKDAHGVVIVFNADIPSHLKEIETWYSCFVQQQFLQDSQCLLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG G G
Sbjct: 122 HHKPGSGGDMG 132
>gi|291413236|ref|XP_002722866.1| PREDICTED: RAB, member of RAS oncogene family-like 5-like isoform 1
[Oryctolagus cuniculus]
Length = 185
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 3/131 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRIVE E SK E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDIAEYNPTQGVRIVEFEDPQLASNSKGAGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFE+ WPA +D G++ VFN+ VP H+ E+ +++ FV Q L + +CLLI
Sbjct: 62 WDCGGDTKFEACWPALMKDAQGVVIVFNADVPSHLQEIEMWHSCFVQQQPLQDSQCLLIA 121
Query: 118 NVKPGRGDSSG 128
+ KPG G
Sbjct: 122 HHKPGSAAQKG 132
>gi|149756024|ref|XP_001504514.1| PREDICTED: rab-like protein 5-like isoform 1 [Equus caballus]
Length = 184
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 85/131 (64%), Gaps = 4/131 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGP-RSGKTVLANFLTESSDITEYNPTQGVRILEFENLHVTSNNKGAGCEFEL 60
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD GD KFES WPA +D HG++ VFN+ +P H+ EL ++Y FV Q L + +CLLI
Sbjct: 61 WDCGGDPKFESCWPALMKDAHGVVIVFNADMPSHLKELEMWYSCFVQQQLLQDTQCLLIA 120
Query: 118 NVKPGRGDSSG 128
+ KPG G G
Sbjct: 121 HHKPGSGSDRG 131
>gi|318067906|ref|NP_001187329.1| rab-like protein 5 [Ictalurus punctatus]
gi|308322729|gb|ADO28502.1| rab-like protein 5 [Ictalurus punctatus]
Length = 192
Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 82/136 (60%), Gaps = 5/136 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHS---YALDTSKTEI 55
+K+KIL++GP GKTVLAN L D T EY PTQGVRI+E E S E+
Sbjct: 7 LKVKILLIGPSECGKTVLANFLSDTVETIGSEYRPTQGVRILEFESQNLGSGTKDSACEV 66
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD +GD KFE+ WPA RD +G++ VFN +P H+ E+ +Y F++ L +CLL
Sbjct: 67 ELWDCAGDFKFEACWPALMRDSNGVVIVFNPDIPSHLKEVETWYSTFISSQSLQAGQCLL 126
Query: 116 IDNVKPGRGDSSGHAH 131
I + KPG G + H
Sbjct: 127 IAHHKPGSGADTSHPQ 142
>gi|58332246|ref|NP_001011271.1| rab-like protein 5 [Xenopus (Silurana) tropicalis]
gi|82179474|sp|Q5M8K8.1|RABL5_XENTR RecName: Full=Rab-like protein 5
gi|56789402|gb|AAH87980.1| RAB, member of RAS oncogene family-like 5 [Xenopus (Silurana)
tropicalis]
gi|89272708|emb|CAJ83977.1| RAB, member RAS oncogene family-like 5 [Xenopus (Silurana)
tropicalis]
Length = 184
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTT--AEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K K+L++GP +GKT+LAN + D T EY+PTQGVRI+E E S E+ELWD
Sbjct: 3 KAKVLVVGPTESGKTILANFISDATETIGGEYNPTQGVRILEFECPNGNKGSSCEVELWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
GD KFES WP +D HG+I VF++ +P H+ E+ +++ F+ + L ++CLLI +
Sbjct: 63 CGGDSKFESCWPVIMKDSHGVIIVFSADIPSHLKEIEMWHLNFIQKQRLQENRCLLIAHK 122
Query: 120 KPGRGD 125
KPG GD
Sbjct: 123 KPGSGD 128
>gi|444715593|gb|ELW56458.1| Rab-like protein 5 [Tupaia chinensis]
Length = 153
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 85/140 (60%), Gaps = 12/140 (8%)
Query: 1 MKIKILILGPI---------MAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTS 51
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +
Sbjct: 2 LKAKILFVGPCEQRLICSISQSGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNN 61
Query: 52 K---TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDL 108
K E ELWD GD KFES WPA +D HG++ +FN+ +P H+ E+ ++Y FV Q L
Sbjct: 62 KGTGCEFELWDCGGDAKFESCWPALMKDAHGVVIIFNADIPSHLKEIEMWYSCFVQQQFL 121
Query: 109 NNHKCLLIDNVKPGRGDSSG 128
+ +CLLI + KPG G G
Sbjct: 122 QDTQCLLIAHHKPGSGGDKG 141
>gi|348501126|ref|XP_003438121.1| PREDICTED: rab-like protein 5-like [Oreochromis niloticus]
Length = 185
Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 3/126 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKT-EIELW 58
K KIL +GP +GKTVLAN L D T EY PTQGVRI+E E + K+ E+ELW
Sbjct: 3 KAKILFVGPNESGKTVLANFLSDTTENVGGEYRPTQGVRILEFESQPEGSSDKSCEVELW 62
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D SGD KFES WPA +D G++ +FN VP H+ E+ +++ F++ L + +CLLI +
Sbjct: 63 DCSGDFKFESCWPAIMKDSSGVVIIFNPDVPSHLKEIEMWHSMFISSQGLQDSQCLLIAH 122
Query: 119 VKPGRG 124
KPG G
Sbjct: 123 HKPGSG 128
>gi|213514336|ref|NP_001134223.1| rab-like protein 5 [Salmo salar]
gi|209731614|gb|ACI66676.1| Rab-like protein 5 [Salmo salar]
Length = 187
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE--HSYALDTSKT-EIE 56
K K+L++GP +GKTVLAN L D T EY PTQGVRI+E E + + D S T E+E
Sbjct: 3 KAKLLLIGPSESGKTVLANFLSDTVETVGGEYCPTQGVRILEFESQNEGSGDKSSTCEVE 62
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD +GD KFES WPA +D +G++ VFN P H++E+ +Y F++ L + +CLL+
Sbjct: 63 LWDCAGDFKFESCWPALMKDSNGVVIVFNPDTPRHLTEVETWYSMFISSQGLQDSQCLLM 122
Query: 117 DNVKPGRGDSSGHAH 131
+ KPG G +G +
Sbjct: 123 AHHKPGSGVDNGRPN 137
>gi|281349121|gb|EFB24705.1| hypothetical protein PANDA_020157 [Ailuropoda melanoleuca]
Length = 173
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 3/121 (2%)
Query: 12 MAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFES 68
+GKTVLAN L + + EY+PTQGVRI+E E+ + +K E ELWD GD KFES
Sbjct: 1 QSGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNTKGTGCEFELWDCGGDPKFES 60
Query: 69 VWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSG 128
WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI + KPG G G
Sbjct: 61 CWPALMKDSHGVVIVFNADLPSHLKEIEMWYSCFVQQQFLQDTQCLLIAHHKPGSGSDKG 120
Query: 129 H 129
+
Sbjct: 121 N 121
>gi|301788896|ref|XP_002929865.1| PREDICTED: rab-like protein 5-like [Ailuropoda melanoleuca]
Length = 193
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 78/120 (65%), Gaps = 3/120 (2%)
Query: 13 AGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFESV 69
+GKTVLAN L + + EY+PTQGVRI+E E+ + +K E ELWD GD KFES
Sbjct: 22 SGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNTKGTGCEFELWDCGGDPKFESC 81
Query: 70 WPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSGH 129
WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI + KPG G G+
Sbjct: 82 WPALMKDSHGVVIVFNADLPSHLKEIEMWYSCFVQQQFLQDTQCLLIAHHKPGSGSDKGN 141
>gi|443707034|gb|ELU02828.1| hypothetical protein CAPTEDRAFT_227591 [Capitella teleta]
Length = 189
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALD--TSKTEIE 56
K K+L+LGP +GKT +AN L D T + YHPTQG RI+E E+S ++ + E+E
Sbjct: 2 FKAKVLVLGPCKSGKTTIANFLADATETSGASYHPTQGCRILEFENSVNVNGRSVNAEVE 61
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SGD KFES WPA +D +G++FV N P H +L +Y YF+ Q +L N C++
Sbjct: 62 LWDVSGDQKFESCWPAIAKDANGVVFVMNPDHPNHDKQLETWYSYFIAQQNLRNVHCVVF 121
>gi|225708200|gb|ACO09946.1| Rab-like protein 5 [Osmerus mordax]
Length = 185
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE--HSYALDTSKTEIE 56
K KI+++GP +GKTVL+N L D T EY+PTQG RI+E E + + S E+E
Sbjct: 2 FKAKIIVIGPSESGKTVLSNFLSDTVETIGGEYNPTQGARILEFESQNEGSDKYSSCEVE 61
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD +GD +FES WPA +D +G+I VFN VP H+ E+ +Y F+ L +++CLL+
Sbjct: 62 LWDCAGDFRFESCWPALMKDANGVIIVFNPDVPNHLKEVETWYSMFIASQGLQDNQCLLM 121
Query: 117 DNVKPGRG 124
+ KPG G
Sbjct: 122 AHHKPGSG 129
>gi|229368066|gb|ACQ59013.1| Rab-like protein 5 [Anoplopoma fimbria]
Length = 186
Score = 119 bits (297), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 82/134 (61%), Gaps = 8/134 (5%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAE----EYHPTQGVRIVE--CEHSYALDTSKTEI 55
K K+L +GP +GKTVLAN L D TAE EY PTQGVRI+E + + D +K E+
Sbjct: 3 KAKVLFIGPNESGKTVLANFLSD--TAENVGGEYRPTQGVRILEFDSQPEGSGDNAKCEV 60
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD SGD KFES WPA +D G++ +FN VP H+ E +Y ++ L + +CLL
Sbjct: 61 ELWDCSGDFKFESCWPAMIKDSSGVVIIFNPDVPSHLKETETWYSMLISSQGLQDKQCLL 120
Query: 116 IDNVKPGRGDSSGH 129
+ + KPG G G
Sbjct: 121 MAHHKPGSGVEDGR 134
>gi|410923791|ref|XP_003975365.1| PREDICTED: rab-like protein 5-like isoform 1 [Takifugu rubripes]
Length = 184
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 76/130 (58%), Gaps = 2/130 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KIL +GP +GKTVLAN L D T EY PT+GVRI+E E + E+ELWD
Sbjct: 3 KAKILFIGPSESGKTVLANFLSDTTENVGGEYRPTKGVRILEFETQAEGSRKRCEVELWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
SGD KFES WPA +D G++ +FN V H+ E+ ++ F+ L +CLLI +
Sbjct: 63 CSGDFKFESCWPAIMKDSSGVVIIFNPDVKSHLKEIETWHSMFIASQSLQESQCLLIAHQ 122
Query: 120 KPGRGDSSGH 129
KPG +G
Sbjct: 123 KPGSEVENGR 132
>gi|410984590|ref|XP_003998610.1| PREDICTED: rab-like protein 5 [Felis catus]
Length = 185
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 76/120 (63%), Gaps = 3/120 (2%)
Query: 13 AGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFESV 69
+GKTVLAN L + + EY+PTQGVRI+E E+ + K E ELWD GD KFES
Sbjct: 14 SGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSDDKGTACEFELWDCGGDPKFESC 73
Query: 70 WPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSGH 129
WPA +D HG++ VFN+ P H+ E+ ++Y FV Q L + +CLLI + KPG G G+
Sbjct: 74 WPALMKDSHGVVIVFNADTPSHLKEIDMWYSCFVQQQLLQDTQCLLIAHHKPGSGSDKGN 133
>gi|301627715|ref|XP_002943015.1| PREDICTED: LOW QUALITY PROTEIN: rab-like protein 5-like [Xenopus
(Silurana) tropicalis]
Length = 186
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 82/128 (64%), Gaps = 4/128 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTT--AEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K K+L++GP +GK+VLAN + D T A EY+PTQGVRI+ECE S E+ELWD
Sbjct: 3 KAKVLVVGPTESGKSVLANFISDATETIAGEYNPTQGVRILECECPNGNKGSSCEVELWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFY--DYFVTQSDLNNHKCLLID 117
GD KF+S WP + HG+I VFNS +P H+ E+ +++ + + ++ +CLLI
Sbjct: 63 CGGDSKFKSCWPVIMKYSHGVIIVFNSDIPSHLKEIEMWHLKEQXHQKMKVSECECLLIA 122
Query: 118 NVKPGRGD 125
+ KPG GD
Sbjct: 123 HKKPGSGD 130
>gi|395536438|ref|XP_003770224.1| PREDICTED: rab-like protein 5 [Sarcophilus harrisii]
Length = 173
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Query: 12 MAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFES 68
M+GKTVLAN L + + EY+PTQGVRI+E E+ +K E ELWD GD KFES
Sbjct: 1 MSGKTVLANFLTESSDITEYNPTQGVRILEFENPQVTSNNKGTGCEFELWDCGGDRKFES 60
Query: 69 VWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
WPA +D G++ +FN+ +P H+ E+ +++ FV Q L +++CLLI + KPG G
Sbjct: 61 CWPALMKDSQGVVIIFNADIPSHLKEIEMWHSCFVQQQLLQDNQCLLIAHHKPGSG 116
>gi|62955735|ref|NP_001017884.1| rab-like protein 5 [Danio rerio]
gi|82178175|sp|Q567Y6.1|RABL5_DANRE RecName: Full=Rab-like protein 5
gi|62202378|gb|AAH92964.1| Zgc:110645 [Danio rerio]
Length = 187
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTA--EEYHPTQGVRIVECEHSYAL----DTSKTEI 55
K+KIL++GP GKT LAN L D T + +Y PTQGVRI+E E S+ L +S ++
Sbjct: 3 KVKILLIGPSECGKTALANFLSDTTESIGADYSPTQGVRILEFE-SHNLHNGNKSSSCDV 61
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD +GD KFES WPA +D +G+ VFN VP H+ E+ +Y F++ L +CLL
Sbjct: 62 ELWDCAGDFKFESCWPALMKDSNGVAVVFNPDVPSHLKEIETWYSAFISSQGLLEGQCLL 121
Query: 116 IDNVKPGRG 124
I + KPG G
Sbjct: 122 IAHHKPGSG 130
>gi|118100116|ref|XP_415752.2| PREDICTED: RAB, member RAS oncogene family-like 5 [Gallus gallus]
Length = 186
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 4/131 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCD-LTTAEEYHPTQGVRIVECEHSYALDTSK---TEIE 56
+K+K+L++GP +GK+VLAN + + + Y PTQGVRI+E E SK E
Sbjct: 2 LKVKVLLVGPRESGKSVLANFVSESIEGIGSYIPTQGVRILEYEKPNLNGNSKGAGCRFE 61
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SGD KFE+ WPA +D HG+I +FN +P H+ E+ ++Y FV Q L + +CLL+
Sbjct: 62 LWDCSGDQKFETCWPALMKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQPLLDSQCLLV 121
Query: 117 DNVKPGRGDSS 127
+ KPG + +
Sbjct: 122 AHHKPGSAEDT 132
>gi|47223024|emb|CAG07111.1| unnamed protein product [Tetraodon nigroviridis]
Length = 184
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELW 58
K KIL +GP +GKTVLAN L D T EY PT+GVRI+E E + +ELW
Sbjct: 2 FKAKILFIGPSESGKTVLANFLSDTTENVGGEYRPTKGVRILEFETQAEGGRTTRGVELW 61
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D SGD KFES WPA +D G++ +FN V H+ E+ ++ F++ L +CLLI +
Sbjct: 62 DCSGDFKFESCWPAIMKDSCGVVIIFNPDVKSHLKEIETWHSMFISPQSLQESQCLLIAH 121
Query: 119 VKPGRGDSSGH 129
KPG +G
Sbjct: 122 QKPGSEVENGR 132
>gi|326931183|ref|XP_003211713.1| PREDICTED: rab-like protein 5-like [Meleagris gallopavo]
Length = 186
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 4/131 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCD-LTTAEEYHPTQGVRIVECEHSYALDTSK---TEIE 56
+K K+L++GP +GK+VLAN + + + Y PTQGVRI+E E SK E
Sbjct: 2 LKAKVLLVGPRESGKSVLANFVSESIEGIGSYVPTQGVRILEYEKPNLNGNSKGAGCRFE 61
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SGD KFE+ WPA +D HG+I +FN +P H+ E+ ++Y FV Q L + +CLL+
Sbjct: 62 LWDCSGDQKFETCWPALMKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQPLLDSQCLLV 121
Query: 117 DNVKPGRGDSS 127
+ KPG + +
Sbjct: 122 AHHKPGSAEDT 132
>gi|156380854|ref|XP_001631982.1| predicted protein [Nematostella vectensis]
gi|156219031|gb|EDO39919.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 81/127 (63%), Gaps = 6/127 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECE-HSYALDTSKT---E 54
K KIL+LGP +GKTV+AN L D T + +YHPTQGVRI+E E +S + +T E
Sbjct: 2 FKSKILVLGPCESGKTVIANFLSDATETSGGDYHPTQGVRILEFECNSIEITPGRTANCE 61
Query: 55 IELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCL 114
+ELWD SG+H+F + WPAFQ+D +G+I V+N P +L +Y FV L + +C+
Sbjct: 62 VELWDCSGNHRFSTCWPAFQKDANGVIIVYNPDQPNQDKDLETWYTQFVQTQMLKDSQCI 121
Query: 115 LIDNVKP 121
+ + KP
Sbjct: 122 VFAHHKP 128
>gi|225714820|gb|ACO13256.1| Rab-like protein 5 [Esox lucius]
Length = 187
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALDTSKT---EI 55
K KI+++GP +GKTVLAN L D T EY PTQGVRI+E E K+ E+
Sbjct: 2 FKAKIILIGPSESGKTVLANFLSDTVETIGGEYSPTQGVRILEFESQIEGSGDKSSLCEV 61
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD +GD KFES WPA + +G++ VFN V H+ E+ ++ F++ L++++CLL
Sbjct: 62 ELWDCAGDFKFESCWPALFKGSNGVVIVFNPDVQRHLMEVETWHSMFISSQGLHDNQCLL 121
Query: 116 IDNVKPGRGDSSGH 129
+ + KPG G +G
Sbjct: 122 MAHHKPGGGTDNGR 135
>gi|224076136|ref|XP_002193343.1| PREDICTED: RAB, member RAS oncogene family-like 5 [Taeniopygia
guttata]
Length = 186
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 78/126 (61%), Gaps = 4/126 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTA-EEYHPTQGVRIVECEHSYALDTSK---TEIE 56
++ K+L++GP +GK+VLAN + + T Y PTQGVRI+E E K E
Sbjct: 2 LRAKVLLVGPRESGKSVLANFVSESTEGICSYSPTQGVRILEYEKPNLGGNGKGAGCRFE 61
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SGD KFE+ WPA +D HG+I +FN +P H+ E+ ++Y FV Q L + +CLL+
Sbjct: 62 LWDCSGDQKFETCWPALMKDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQPLLDSQCLLV 121
Query: 117 DNVKPG 122
+ KPG
Sbjct: 122 AHHKPG 127
>gi|350402937|ref|XP_003486650.1| PREDICTED: rab-like protein 5-like [Bombus impatiens]
Length = 192
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECEHSYALDTSK---TEIELW 58
+KI++ GPI +GKT ++N L D T +YHPT+GVRI+E E +K +IELW
Sbjct: 4 LKIIVTGPIRSGKTTISNFLADATEIPYDYHPTKGVRILEFEVQNINVNNKHIAKDIELW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
D SGDHKFES WPA ++DVHG+I V+N + E+ YDYF+ Q+ L+ +C +
Sbjct: 64 DCSGDHKFESCWPAIRKDVHGVILVYNEKSNECLKEIQQLYDYFIDQTKLDPDRCAI 120
>gi|291232084|ref|XP_002736022.1| PREDICTED: predicted protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 185
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 82/133 (61%), Gaps = 7/133 (5%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALD--TSKTEIEL 57
K KIL+LGP +GKT ++N L D T + EYH TQGVRI+E E + + + E+EL
Sbjct: 3 KAKILVLGPCESGKTAISNFLADATDTSGGEYHATQGVRILEFETNLHVGGRLANAEVEL 62
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD SG+ KFE+ WPAF +D +G++ V+N H +L ++Y FV L + +C++
Sbjct: 63 WDCSGNQKFETCWPAFMKDTNGVVMVYNPDQSNHDKQLEMWYSNFVVGQGLRDSQCIIFA 122
Query: 118 NVKPGRGDSSGHA 130
+ KP +SS HA
Sbjct: 123 HQKP---NSSSHA 132
>gi|340716803|ref|XP_003396882.1| PREDICTED: rab-like protein 5-like [Bombus terrestris]
Length = 192
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 77/117 (65%), Gaps = 4/117 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECEHSYALDTSK---TEIELW 58
+KI+++GPI +GKT ++N L D T +YHPT+GVRI+E E +K ++ELW
Sbjct: 4 LKIIVIGPIRSGKTTISNFLADATEIPYDYHPTKGVRILEFEVQNINVNNKHIAKDVELW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
D SGD+KFES WPA ++DVHG+I V+N + E+ YDYF+ Q+ L+ +C +
Sbjct: 64 DCSGDYKFESCWPAIRKDVHGVILVYNEKSNECLKEIQQLYDYFIDQTKLDPDRCAI 120
>gi|349603201|gb|AEP99107.1| Rab-like protein 5-like protein, partial [Equus caballus]
Length = 161
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 66/102 (64%), Gaps = 3/102 (2%)
Query: 30 EYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNS 86
EY+PTQGVRI+E E+ + +K E ELWD GD KFES WPA +D HG++ VFN+
Sbjct: 7 EYNPTQGVRILEFENLHVTSNNKGAGCEFELWDCGGDPKFESCWPALMKDAHGVVIVFNA 66
Query: 87 GVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSG 128
+P H+ EL ++Y FV Q L + +CLLI + KPG G G
Sbjct: 67 DMPSHLKELEMWYSCFVQQQLLQDTQCLLIAHHKPGSGSDRG 108
>gi|74137528|dbj|BAE35804.1| unnamed protein product [Mus musculus]
Length = 102
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLF 98
WD GD KFES WPA +D HG++ VFN+ +P H+ E+ ++
Sbjct: 62 WDCGGDSKFESCWPALMKDAHGVVIVFNADIPSHLKEIEMW 102
>gi|327287212|ref|XP_003228323.1| PREDICTED: rab-like protein 5-like [Anolis carolinensis]
Length = 214
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 13 AGKTVLANALCDLTTA-EEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFES 68
AGK+VLAN L + T Y PTQGVRI+E E + SK ELWD SGD KFE+
Sbjct: 42 AGKSVLANFLSESTEGIGSYIPTQGVRILEYEKPHLNGNSKGAGCRFELWDCSGDQKFET 101
Query: 69 VWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSG 128
WPA +D HG + VFN +P H+ E+ +++ FV Q L + +CLLI + KPG SSG
Sbjct: 102 CWPALTKDAHGAVIVFNPDLPSHVKEIEMWHSCFVQQQQLLDSQCLLIAHHKPG---SSG 158
Query: 129 HAHSLR 134
LR
Sbjct: 159 DIEDLR 164
>gi|298707050|emb|CBJ29852.1| FAP9, Ras superfamily GTPase-like flagellar protein [Ectocarpus
siliculosus]
Length = 183
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTA-----EEYHPTQGVRIVECEHSYALDTSKTEIEL 57
+KI++ GP+ GKT +AN + T Y PT GVRI+ECE + +K +E+
Sbjct: 8 LKIVVCGPVKGGKTSIANFIAGQTEQIGTGNRIYEPTVGVRILECEKQPGITGNKVPVEI 67
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
WD SGD FES WPA + V G++ V+N +P H E+ +++D FV + L+N +C +I
Sbjct: 68 WDVSGDQAFESCWPAIMKGVDGVMLVYNPEIPTHDIEVGIWFDQFVKRPKLDNRQCQVI 126
>gi|383853251|ref|XP_003702136.1| PREDICTED: rab-like protein 5-like [Megachile rotundata]
Length = 192
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECEHSYALDTSK---TEIELW 58
+KI+++GPI +GKT +AN L D T +Y+PTQG RI+E E + +K +IELW
Sbjct: 4 LKIVLIGPIRSGKTTIANFLADATEVPYDYYPTQGARILEFEVNNISADNKYITKDIELW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
D SGDHKFE+ WPA ++D+HG+I V++ + L YDYF+ Q L KC++
Sbjct: 64 DCSGDHKFENCWPAIRKDLHGVILVYSERSNDCLKVLQQLYDYFIDQIKLGPDKCVI 120
>gi|449265923|gb|EMC77050.1| Rab-like protein 5, partial [Columba livia]
Length = 173
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query: 13 AGKTVLANALCDLTTA-EEYHPTQGVRIVECEHSYALDTSK---TEIELWDTSGDHKFES 68
+GK+VLAN + + T Y PTQGVRI+E E SK ELWD SGD KFE+
Sbjct: 1 SGKSVLANFVSESTEGIGSYSPTQGVRILEYEKPSLNGNSKGTGCRFELWDCSGDQKFET 60
Query: 69 VWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSG 128
WPA +D HG+I +FN +P H+ E+ ++Y FV Q L + +CLL+ + KPG S+G
Sbjct: 61 CWPALMKDTHGVIIIFNPELPSHLKEIEMWYSCFVQQQPLLDSQCLLVAHHKPG---SAG 117
Query: 129 HAHSL 133
+L
Sbjct: 118 DTENL 122
>gi|335284183|ref|XP_003354533.1| PREDICTED: rab-like protein 5-like isoform 2 [Sus scrofa]
Length = 155
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 71/129 (55%), Gaps = 27/129 (20%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EYHPTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYHPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H++E+ ++Y FV Q L + +CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIVFNADIPSHLTEIEMWYSCFVQQQFLQDTQCLLIAHHK 94
Query: 121 PGRGDSSGH 129
PG G G+
Sbjct: 95 PGSGSDKGN 103
>gi|297680110|ref|XP_002817848.1| PREDICTED: rab-like protein 5 isoform 2 [Pongo abelii]
Length = 155
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDVTEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|402863106|ref|XP_003895873.1| PREDICTED: rab-like protein 5 isoform 2 [Papio anubis]
Length = 155
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|405968352|gb|EKC33429.1| Rab-like protein 5 [Crassostrea gigas]
Length = 187
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 13 AGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDHKFESVW 70
AGKT ++N L D T ++ EYHPTQGVRI+E E S ++ELWD SGD KFE W
Sbjct: 17 AGKTAVSNFLADATEGSSGEYHPTQGVRILEFE-SQTNSRQGVDVELWDVSGDPKFEPCW 75
Query: 71 PAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPG 122
A +D +G+IFV+N P H +L +Y+YFV ++ C++ + KPG
Sbjct: 76 SALAKDTNGVIFVYNPDQPNHDKDLENWYNYFVENQNIKESACIIFAHHKPG 127
>gi|158257940|dbj|BAF84943.1| unnamed protein product [Homo sapiens]
Length = 155
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|195546889|ref|NP_001124292.1| rab-like protein 5 isoform b [Homo sapiens]
gi|114615138|ref|XP_001154629.1| PREDICTED: uncharacterized protein LOC741533 isoform 1 [Pan
troglodytes]
gi|397471312|ref|XP_003807240.1| PREDICTED: rab-like protein 5 isoform 2 [Pan paniscus]
gi|13325451|gb|AAH04522.1| RABL5 protein [Homo sapiens]
gi|119570604|gb|EAW50219.1| RAB, member RAS oncogene family-like 5, isoform CRA_c [Homo
sapiens]
gi|410208964|gb|JAA01701.1| RAB, member RAS oncogene family-like 5 [Pan troglodytes]
gi|410293328|gb|JAA25264.1| RAB, member RAS oncogene family-like 5 [Pan troglodytes]
Length = 155
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|109066191|ref|XP_001108327.1| PREDICTED: rab-like protein 5-like isoform 1 [Macaca mulatta]
Length = 155
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ +FN+ +P H E+ ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIIFNADIPSHRKEMEMWYSCFVQQQSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|307169042|gb|EFN61886.1| Rab-like protein 5 [Camponotus floridanus]
Length = 183
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Query: 7 ILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECE-HSYALDTSKT--EIELWDTSG 62
++GPI +GKT +AN L D T +Y PTQGVRI+E + + ++ +T +IELWD SG
Sbjct: 1 MIGPINSGKTTIANFLADATEIPYDYRPTQGVRILEFDINDIEINNERTSRDIELWDCSG 60
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
DHKF++ WPA ++ VHG+I V+++ + +L FYDYFV+ + L + C++
Sbjct: 61 DHKFKNCWPAIRKGVHGVILVYSAKMQDSSKQLKEFYDYFVSGAKLGPNNCVIF 114
>gi|403285797|ref|XP_003934197.1| PREDICTED: rab-like protein 5 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 155
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H E ++Y FV Q L + +C+LI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHRKETEMWYSCFVQQQSLQDTQCMLIAHHK 94
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 95 PGSGDDKG 102
>gi|307206633|gb|EFN84612.1| Rab-like protein 5 [Harpegnathos saltator]
Length = 184
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 81/127 (63%), Gaps = 8/127 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECEHSYALDTSK---TEIELW 58
+K++++GP +GKT +AN L D T +Y+PT+GVRI+E E + ++ +IELW
Sbjct: 4 LKLVMIGPAGSGKTTIANFLADATEIPYDYYPTEGVRILEFEANNIEVNNELILRDIELW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI-- 116
D SGD+KF++ W A ++ VHG+I V+++ + EL FYDYFV S L + C+++
Sbjct: 64 DCSGDYKFKNCWSAMRKGVHGVILVYSAQMQDSSKELKEFYDYFVAGSKLGPNSCVILYF 123
Query: 117 --DNVKP 121
DNV P
Sbjct: 124 DPDNVTP 130
>gi|348568292|ref|XP_003469932.1| PREDICTED: rab-like protein 5-like isoform 2 [Cavia porcellus]
Length = 155
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 69/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI + K
Sbjct: 40 -----FESCWPALMKDAHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDSQCLLIAHHK 94
Query: 121 PGRGDSSG 128
PG G G
Sbjct: 95 PGSGGDMG 102
>gi|196011744|ref|XP_002115735.1| hypothetical protein TRIADDRAFT_59732 [Trichoplax adhaerens]
gi|190581511|gb|EDV21587.1| hypothetical protein TRIADDRAFT_59732 [Trichoplax adhaerens]
Length = 180
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 7 ILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTS----KTEIELWDT 60
++GP +GK+V+AN+L + T T Y PT+GVRI+E E + ++S K ++ELWD
Sbjct: 1 MVGPCDSGKSVIANSLAEATDLTGGNYRPTKGVRILEFECNGLRNSSNRTLKADVELWDC 60
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
SG+ +ES WPA +D HG+I V+N H E+ +Y +F++Q L + +C+L ++K
Sbjct: 61 SGNSDYESCWPAMWKDTHGVIIVYNPDNLDHNGEISKWYTHFISQQGLRDSQCMLFAHLK 120
Query: 121 P 121
P
Sbjct: 121 P 121
>gi|426254753|ref|XP_004021041.1| PREDICTED: rab-like protein 5 isoform 2 [Ovis aries]
Length = 155
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 27/124 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L N +CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQNTQCLLIAHHK 94
Query: 121 PGRG 124
PG G
Sbjct: 95 PGSG 98
>gi|345801187|ref|XP_003434783.1| PREDICTED: RAB, member RAS oncogene family-like 5 isoform 1 [Canis
lupus familiaris]
Length = 155
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 27/129 (20%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIVFNADIPSHLKEIEMWYSCFVQQQFLQDTQCLLIAHHK 94
Query: 121 PGRGDSSGH 129
PG G G+
Sbjct: 95 PGSGSDKGN 103
>gi|357619356|gb|EHJ71966.1| putative rab-like protein 5-like isoform 1 [Danaus plexippus]
Length = 173
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 10/124 (8%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEY---HPTQGVRIVECE--HSYALDTSKTEIEL 57
+KILI+GP +GKT +AN L + EE PTQG RI+E E H+ K +IEL
Sbjct: 2 LKILIIGPSDSGKTSIANFLSESMNVEEAGTPRPTQGARILEFELPHNVNERQRKVQIEL 61
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNS---GVPGHISELLLFYDYFVTQSDLNNHKCL 114
WD SGDHKFES WPA + + G+I V ++ V G E+ L Y+YFV+Q+ L+ +C+
Sbjct: 62 WDCSGDHKFESCWPAVRVGIQGVILVCSANTVNVAGR--EIELLYNYFVSQAKLSAKQCV 119
Query: 115 LIDN 118
+ N
Sbjct: 120 VFYN 123
>gi|355560533|gb|EHH17219.1| hypothetical protein EGK_13563 [Macaca mulatta]
Length = 185
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQ---GVRIVECEHSYALDTSK---TE 54
+K KIL +GP A + A + PT RI+E E+ + +K E
Sbjct: 2 LKAKILFVGPCEASASQSAEIT---GMSHRTQPTALLFPFRILEFENPHVTSNNKGTGCE 58
Query: 55 IELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCL 114
ELWD GD KFES WPA +D HG++ +FN+ +P H E+ ++Y FV Q L + +C+
Sbjct: 59 FELWDCGGDAKFESCWPALMKDAHGVVIIFNADIPSHRKEMEMWYSCFVQQQSLQDTQCM 118
Query: 115 LIDNVKPGRGDSSG 128
LI + KPG GD G
Sbjct: 119 LIAHHKPGSGDDKG 132
>gi|344289672|ref|XP_003416566.1| PREDICTED: rab-like protein 5-like isoform 2 [Loxodonta africana]
Length = 155
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYYPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ +FN+ P H+ E+ ++Y FV Q L + +CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIIFNADTPSHLKEIEMWYSCFVQQQLLQDTQCLLIAHHK 94
Query: 121 PGRGDSSG 128
PG G G
Sbjct: 95 PGSGSDRG 102
>gi|74267800|gb|AAI02615.1| RABL5 protein [Bos taurus]
Length = 155
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 67/124 (54%), Gaps = 27/124 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H+ E+ +Y FV Q L N +CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIVFNADIPSHLKEIETWYSCFVQQQFLQNTQCLLIAHHK 94
Query: 121 PGRG 124
PG G
Sbjct: 95 PGSG 98
>gi|380018021|ref|XP_003692937.1| PREDICTED: LOW QUALITY PROTEIN: rab-like protein 5-like, partial
[Apis florea]
Length = 170
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 78/117 (66%), Gaps = 4/117 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAE-EYHPTQGVRIVECE-HSYALDTS--KTEIELW 58
+KI+++G + +GKT ++N L D T +Y+PT+GVRI+E E + ++ S +IELW
Sbjct: 4 LKIIVIGSLRSGKTTISNFLADATEIPYDYYPTKGVRILEFEVQNINVNNSHITKDIELW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
D SGDHK+E WPA ++DVHG++ +++ + ++ YDYF+ Q+ L+ +C++
Sbjct: 64 DCSGDHKYEYCWPAIRKDVHGVMLIYSEQSNECLKKIQQLYDYFIDQTKLDPDRCVI 120
>gi|334324943|ref|XP_003340587.1| PREDICTED: rab-like protein 5-like isoform 2 [Monodelphis
domestica]
Length = 155
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 71/129 (55%), Gaps = 27/129 (20%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ +FN+ +P H+ E+ +++ FV Q L +++CLLI + K
Sbjct: 40 -----FESCWPALMKDSHGVVIIFNADIPSHLKEIEMWHSCFVQQQLLQDNQCLLIAHHK 94
Query: 121 PGRGDSSGH 129
PG G G+
Sbjct: 95 PGSGGDKGN 103
>gi|395842848|ref|XP_003794220.1| PREDICTED: rab-like protein 5 isoform 2 [Otolemur garnettii]
Length = 157
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 27/129 (20%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 4 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVR---------------------- 41
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ +FN+ +P H E+ ++Y FV Q L + +CLLI + K
Sbjct: 42 -----FESCWPALMKDAHGVVIIFNADIPSHRKEIEMWYSCFVQQQFLQDTQCLLIAHHK 96
Query: 121 PGRGDSSGH 129
PG G G
Sbjct: 97 PGSGGDKGR 105
>gi|323454578|gb|EGB10448.1| hypothetical protein AURANDRAFT_15829, partial [Aureococcus
anophagefferens]
Length = 160
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 7/119 (5%)
Query: 4 KILILGPIMAGKTVLANALC------DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIEL 57
KI ++GP AGK+ +AN L A Y PT GVRI+ECE + + +EL
Sbjct: 1 KISVVGPSGAGKSTIANFLAADSDRAQFKLASAYVPTVGVRILECERAVG-GGPASAVEL 59
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
WDT G +ES WPA +D G+I V+N GH+SE +YDYFV ++L + C++
Sbjct: 60 WDTGGSTDYESCWPAIMKDTAGVILVYNPDNEGHVSESGAWYDYFVKNNELPDEACVVF 118
>gi|325188963|emb|CCA23491.1| catalase putative [Albugo laibachii Nc14]
Length = 1125
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
Query: 3 IKILILGPIMAGKTVLANALC----DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELW 58
+K+L++GP +GKT +AN L L E Y PT VRI+E E +K IELW
Sbjct: 395 LKVLVIGPKSSGKTTIANFLAGHQDRLGGQERYQPTIAVRILESE------CNKANIELW 448
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLN-NHKCLLI 116
D SGD +E+ WPA +D HG++ V+N H SE +L+Y++FV+ LN +CL++
Sbjct: 449 DVSGDQIYEACWPAIIKDAHGVVLVYNPESHAHESEAMLWYEWFVSNPGLNPAAQCLIL 507
>gi|338712657|ref|XP_003362745.1| PREDICTED: rab-like protein 5-like isoform 2 [Equus caballus]
Length = 154
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 28/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGP-RSGKTVLANFLTESSDITEYNPTQGVR---------------------- 38
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA +D HG++ VFN+ +P H+ EL ++Y FV Q L + +CLLI + K
Sbjct: 39 -----FESCWPALMKDAHGVVIVFNADMPSHLKELEMWYSCFVQQQLLQDTQCLLIAHHK 93
Query: 121 PGRGDSSG 128
PG G G
Sbjct: 94 PGSGSDRG 101
>gi|324524979|gb|ADY48493.1| Rab-like protein 5 [Ascaris suum]
Length = 198
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALDTS----KTE 54
+K KILI+GP+ GKT ++N L D T A EY PT+GVRIVE E S L+ S E
Sbjct: 19 IKTKILIIGPLKCGKTTISNYLADSNDTNAHEYRPTRGVRIVEFE-SNELELSGERVDAE 77
Query: 55 IELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCL 114
IELWD SGD +E WPA +RD HG+I V LLL+Y FV ++ +N L
Sbjct: 78 IELWDCSGDRHYEKCWPAIRRDTHGVILVCRPD-KDDAQSLLLWYTEFVERAGMNPAHVL 136
Query: 115 LI 116
++
Sbjct: 137 IL 138
>gi|291413238|ref|XP_002722867.1| PREDICTED: RAB, member of RAS oncogene family-like 5-like isoform 2
[Oryctolagus cuniculus]
Length = 155
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 27/128 (21%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +GKTVLAN L + + EY+PTQGVR
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDIAEYNPTQGVR---------------------- 39
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FE+ WPA +D G++ VFN+ VP H+ E+ +++ FV Q L + +CLLI + K
Sbjct: 40 -----FEACWPALMKDAQGVVIVFNADVPSHLQEIEMWHSCFVQQQPLQDSQCLLIAHHK 94
Query: 121 PGRGDSSG 128
PG G
Sbjct: 95 PGSAAQKG 102
>gi|226478774|emb|CAX72882.1| novel protein putative vertebrate RAB, member RAS oncogene
family-like 5 [Schistosoma japonicum]
Length = 186
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 6/124 (4%)
Query: 3 IKILILGPIMAGKTVLANALC---DLTTAEEYHPTQGVRIVECEHSYALD--TSKTEIEL 57
+K++++GP GK+ + N L D T YHPT GVRI+E E + TSK ++EL
Sbjct: 4 LKLVVVGPKECGKSYICNFLSESIDQVTGG-YHPTTGVRILEYEQKIKVKGKTSKIDVEL 62
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WDTSGD+KFE+ WPA R HG+ FV+N H +L +Y SDLN + +I
Sbjct: 63 WDTSGDNKFETCWPAIFRGSHGVAFVYNPDNSNHEEDLNKWYQAVPLYSDLNEQQMCVIC 122
Query: 118 NVKP 121
+ KP
Sbjct: 123 HKKP 126
>gi|340381990|ref|XP_003389504.1| PREDICTED: rab-like protein 5-like [Amphimedon queenslandica]
Length = 192
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTA--EEYHPTQGVRIVE----CEHSYALDTSKTE 54
+K KIL+ GP +GKT ++N L D T + EY PT+GVR++E E +
Sbjct: 3 LKAKILVGGPQESGKTYVSNVLADATESLGGEYQPTKGVRLLEFEVDGERGRGEGLVRVG 62
Query: 55 IELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCL 114
+ELWD G ++E+ WPAF ++ G++ V+N V + +Y YFV Q L + +C+
Sbjct: 63 VELWDAGGGKEYETCWPAFAKETKGLVLVYNPAVSEQSKVVEKWYKYFVKQYGLRDSQCM 122
Query: 115 LI 116
L+
Sbjct: 123 LL 124
>gi|393911977|gb|EFO15777.2| hypothetical protein LOAG_12733 [Loa loa]
Length = 194
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECE-HSYALDTSK--TEI 55
+KIKIL+LGP+ +GKT ++N L D + + +Y PT+GVRIVE E + LD + E+
Sbjct: 10 LKIKILVLGPLQSGKTTISNYLADSSDISLNKYRPTRGVRIVEFESNDLELDGERVEAEV 69
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD SGD +++ WPA +R+ HG+I + S LL +Y+ FV + +++ L+
Sbjct: 70 ELWDCSGDKQYQKCWPAIRRNTHGVILICRPD-QDEGSALLPWYEEFVQRGNIDPSLVLV 128
Query: 116 IDNVKPGRGDSS 127
+ + G+ ++
Sbjct: 129 LLHTTSGQSSNT 140
>gi|312095242|ref|XP_003148293.1| hypothetical protein LOAG_12733 [Loa loa]
Length = 191
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECE-HSYALDTSK--TEI 55
+KIKIL+LGP+ +GKT ++N L D + + +Y PT+GVRIVE E + LD + E+
Sbjct: 7 LKIKILVLGPLQSGKTTISNYLADSSDISLNKYRPTRGVRIVEFESNDLELDGERVEAEV 66
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD SGD +++ WPA +R+ HG+I + S LL +Y+ FV + +++ L+
Sbjct: 67 ELWDCSGDKQYQKCWPAIRRNTHGVILICRPD-QDEGSALLPWYEEFVQRGNIDPSLVLV 125
Query: 116 IDNVKPGRGDSS 127
+ + G+ ++
Sbjct: 126 LLHTTSGQSSNT 137
>gi|291001835|ref|XP_002683484.1| hypothetical protein NAEGRDRAFT_4601 [Naegleria gruberi]
gi|284097113|gb|EFC50740.1| hypothetical protein NAEGRDRAFT_4601 [Naegleria gruberi]
Length = 136
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTT-AEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
+K++++GP +GK+ + N L + EY PT G+RI EC+ K +ELWD S
Sbjct: 7 VKLIVVGPKKSGKSAICNFLSGYKEFSNEYRPTMGLRICECDREMQ-SMEKVSVELWDIS 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
GD FE+ WPA +D++G I V+N H+ EL +Y FV Q ++ + C +
Sbjct: 66 GDRNFENCWPAIMKDMNGCIIVYNPSNINHVKELEFWYKTFV-QKNVKDENCCI 118
>gi|297288244|ref|XP_001103079.2| PREDICTED: hypothetical protein LOC713649 [Macaca mulatta]
Length = 311
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 27/122 (22%)
Query: 7 ILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDHKF 66
+ G + +GKTVLAN L + + EY PTQGVR F
Sbjct: 170 LRGALESGKTVLANVLTESSDITEYSPTQGVR---------------------------F 202
Query: 67 ESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDS 126
ES WPA +D HG++ VF++ +P H E+ ++Y FV Q L + +C+LI + KPG GD
Sbjct: 203 ESCWPALMKDAHGVVIVFSADIPSHWKEMEMWYSCFVQQQSLQDTQCMLIAHHKPGSGDD 262
Query: 127 SG 128
G
Sbjct: 263 KG 264
>gi|198429084|ref|XP_002125725.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
intestinalis]
gi|198429086|ref|XP_002125690.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
Length = 178
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTA--EEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KIL++GP GK+V+AN L D T +Y PT GVRI+E E S ++ ++ELWD
Sbjct: 3 KAKILLVGPCGVGKSVVANFLSDQTDILNSKYRPTIGVRILEFETSLG-NSLNVDVELWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
SG FE+ WPA G+I V++ + + ++YF+T + L +C+L N
Sbjct: 62 CSGSESFETCWPAMASQADGVIIVYDPLIKEPSPAVETLFNYFITSNGLKEMQCMLFANS 121
Query: 120 KPGR 123
K GR
Sbjct: 122 K-GR 124
>gi|346466379|gb|AEO33034.1| hypothetical protein [Amblyomma maculatum]
Length = 188
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 78/133 (58%), Gaps = 8/133 (6%)
Query: 11 IMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYAL---DTSKTEIELWDTSGDHK 65
+ +GKTV++N L + T ++ +Y PT+GVRI+E E L + +ELWD SGD K
Sbjct: 5 LQSGKTVISNFLAEATENSSGQYQPTKGVRILEFESPQILVKGHQTTASVELWDCSGDQK 64
Query: 66 FESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGR-- 123
+E+ WPAF +D G++F+++S +EL +Y+ FV + + +C++ + K G
Sbjct: 65 YENCWPAFSKDAQGVLFIYSSDRRNVGTELDTWYNNFVQSQGVKDSQCMVFCHRKSGEHP 124
Query: 124 -GDSSGHAHSLRR 135
G+SS +H R
Sbjct: 125 AGNSSQLSHLFAR 137
>gi|301108752|ref|XP_002903457.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097181|gb|EEY55233.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 112
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Query: 3 IKILILGPIMAGKTVLANALCD----LTTAEEYHPTQGVRIVECEHSYALDTSKTEIELW 58
+KILI+GP AGK+ +AN L + L + E Y PT GVRI+E LD K +ELW
Sbjct: 4 LKILIVGPKEAGKSTIANFLAEHTDRLGSQERYQPTVGVRILE------LDKGKANVELW 57
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFY 99
D SGD +E+ WPA +D G+I V+N H SE +L++
Sbjct: 58 DVSGDQNYEACWPAVMKDTDGVILVYNPESHVHESEAVLWF 98
>gi|443724729|gb|ELU12598.1| hypothetical protein CAPTEDRAFT_104452, partial [Capitella
teleta]
Length = 91
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Query: 12 MAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALD--TSKTEIELWDTSGDHKFE 67
+GKT +AN L D T + YHPTQG RI+E E+S ++ + E+ELWD SGD KFE
Sbjct: 1 QSGKTTIANFLADATETSGASYHPTQGCRILEFENSVNVNGRSVNAEVELWDVSGDQKFE 60
Query: 68 SVWPAFQRDVHGIIFVFNSGVPGHISEL 95
S WPA +D +G++FV N P H +L
Sbjct: 61 SCWPAIAKDANGVVFVMNPDHPNHDKQL 88
>gi|145551867|ref|XP_001461610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831217|emb|CAI39264.1| rab_A78 [Paramecium tetraurelia]
gi|124429445|emb|CAK94237.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEE--YHPTQGVRIVECEHSYALD-----TSKTEI 55
IKILI+GP+ +GK+ LAN + D + Y PT GVRI+E E + + K +
Sbjct: 7 IKILIIGPLQSGKSRLANYIADREDISQNGYRPTAGVRILEFEKEAPKNPKRPGSEKVIV 66
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
ELWD SGD KF+S WPA +D G+I V+N+ P H EL
Sbjct: 67 ELWDMSGDAKFDSCWPAIIKDAQGVICVYNAENPKHEQEL 106
>gi|145545989|ref|XP_001458678.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833772|emb|CAI39353.1| rab_B78 [Paramecium tetraurelia]
gi|124426499|emb|CAK91281.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 11/110 (10%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEE--YHPTQGVRIVECEHSYALD-----TSKTEI 55
IKIL++GP +GK+ LAN + D + Y PT GVRI+E E + + K +
Sbjct: 7 IKILLIGPQQSGKSRLANYIADREDISQNGYRPTAGVRILEFEKEAPKNPKRPGSEKVIV 66
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ 105
ELWD SGD+K++S WPA +D G+I V+N+ P H EL +++V Q
Sbjct: 67 ELWDMSGDNKYDSCWPAVMKDAQGVICVYNAENPKHEQEL----EWWVNQ 112
>gi|348669239|gb|EGZ09062.1| hypothetical protein PHYSODRAFT_252263 [Phytophthora sojae]
Length = 104
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 10/101 (9%)
Query: 3 IKILILGPIMAGKTVLANALCD----LTTAEEYHPTQGVRIVECEHSYALDTSKTEIELW 58
+KILI+GP AGK+ +AN L + L E Y PT GVRI+E E K IELW
Sbjct: 4 LKILIVGPKEAGKSTIANFLAEHSDRLGGQERYQPTVGVRILEIE------KGKANIELW 57
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFY 99
D SGD +E+ WPA +D G++ V+N H SE +L++
Sbjct: 58 DISGDQNYEACWPAVMKDTDGVVLVYNPESHVHESEAMLWF 98
>gi|340506346|gb|EGR32505.1| rab-like protein 5, putative [Ichthyophthirius multifiliis]
Length = 195
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTA--EEYHPTQGVRIVECEHSYALDTSK-----TEI 55
+KIL++GPI +GK+ ++N L + ++Y PT GVRIVE ++ + +
Sbjct: 8 VKILVIGPIQSGKSSISNFLGQRSEVINKDYRPTAGVRIVEFNKEAPVNPKRPGQETASV 67
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF 102
+LWD SGD K++ WPA Q++ G I VFN+ P H E+ + + F
Sbjct: 68 QLWDVSGDSKYDQTWPAIQKNCQGCILVFNAENPKHEQEIEAWVNAF 114
>gi|332029376|gb|EGI69331.1| Rab-like protein 5 [Acromyrmex echinatior]
Length = 153
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 13 AGKTVLANALCDLT-TAEEYHPTQGVRIVECE-HSYALDTSKT--EIELWDTSGDHKFES 68
+GKT +AN L + T + +Y PTQGVRI+E E + + + ++ELWD SG+HKF++
Sbjct: 1 SGKTTIANFLAEATEISYDYRPTQGVRILEFEINDIEVKNERISRDLELWDCSGNHKFKN 60
Query: 69 VWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
W A ++DV G+I V+N+ + +L +YDYFV+ + L + C++
Sbjct: 61 CWSAIRKDVDGVILVYNAKMQDSSKKLKEYYDYFVSGAKLGPNCCVIF 108
>gi|170586984|ref|XP_001898259.1| RAB, member of RAS oncogene family-like 5 [Brugia malayi]
gi|158594654|gb|EDP33238.1| RAB, member of RAS oncogene family-like 5, putative [Brugia malayi]
Length = 194
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECE-HSYALDTSKTE--I 55
+KIKIL+LGP+ +GKT ++N L D + + PT+GVRIVE E + L+ + E +
Sbjct: 10 LKIKILVLGPLKSGKTTISNYLADSNDISFNIHRPTRGVRIVEFESNDLELNGERVEAEV 69
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
ELWD SGD K++ WPA + + HG+I V S LL +Y FV + +++ L+
Sbjct: 70 ELWDCSGDKKYQRCWPAIRHNTHGVILVCKPD-QDKGSSLLPWYKEFVQRGNIDPSLVLV 128
Query: 116 I 116
+
Sbjct: 129 L 129
>gi|410923793|ref|XP_003975366.1| PREDICTED: rab-like protein 5-like isoform 2 [Takifugu rubripes]
Length = 157
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 29/130 (22%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KIL +GP +GKTVLAN L D T EY PT+GVR
Sbjct: 3 KAKILFIGPSESGKTVLANFLSDTTENVGGEYRPTKGVR--------------------- 41
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
FES WPA +D G++ +FN V H+ E+ ++ F+ L +CLLI +
Sbjct: 42 ------FESCWPAIMKDSSGVVIIFNPDVKSHLKEIETWHSMFIASQSLQESQCLLIAHQ 95
Query: 120 KPGRGDSSGH 129
KPG +G
Sbjct: 96 KPGSEVENGR 105
>gi|403336532|gb|EJY67463.1| Rab-like protein 5 [Oxytricha trifallax]
gi|403372997|gb|EJY86410.1| Rab-like protein 5 [Oxytricha trifallax]
Length = 189
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEE--YHPTQGVRIVECEHSYA---LDTSKTEIE 56
++K+LI+GP +GK+ +AN L DL Y PT G RIV+ E + K +E
Sbjct: 3 RLKLLIVGPSKSGKSTVANILGDLQDGPSTIYRPTIGCRIVDFERDPPPGVTNFGKIHLE 62
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SGD K+E W Q+D HGIIFV++ P +L F L C++
Sbjct: 63 LWDCSGDFKYEKCWAPMQKDAHGIIFVYDPANPQAEDQLNQLVQLFPKAMMLQPKFCMVF 122
Query: 117 DN 118
N
Sbjct: 123 IN 124
>gi|74026348|ref|XP_829740.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70835126|gb|EAN80628.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261335784|emb|CBH18778.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 219
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 3 IKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALDTS--------- 51
+KIL+LGP +GK+ + N L T +EYH T +R++E E ALD +
Sbjct: 6 VKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVE--IALDDTRRSGRQAAG 63
Query: 52 --KTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDL- 108
K ++LWD G K ++ WPA + GII+VFN V G ELLL+Y F D
Sbjct: 64 LKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFALNQDEL 123
Query: 109 ---NNHKCLLID 117
NN K + D
Sbjct: 124 DDDNNFKMRVTD 135
>gi|291232086|ref|XP_002736023.1| PREDICTED: predicted protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 156
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 32/131 (24%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KIL+LGP +GKT ++N L D T + EYH TQGVR
Sbjct: 3 KAKILVLGPCESGKTAISNFLADATDTSGGEYHATQGVR--------------------- 41
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
FE+ WPAF +D +G++ V+N H +L ++Y FV L + +C++ +
Sbjct: 42 ------FETCWPAFMKDTNGVVMVYNPDQSNHDKQLEMWYSNFVVGQGLRDSQCIIFAHQ 95
Query: 120 KPGRGDSSGHA 130
KP +SS HA
Sbjct: 96 KP---NSSSHA 103
>gi|428175341|gb|EKX44231.1| hypothetical protein GUITHDRAFT_152994 [Guillardia theta CCMP2712]
Length = 190
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 13/135 (9%)
Query: 2 KIKILILGPIMAGKTVLANAL------CDLTTAEEYHPTQGVRIVECEHSYALDTS--KT 53
++KIL++GP +GK+ LAN L C+ + PT G RI+E + + T
Sbjct: 3 EVKILMVGPKSSGKSSLANFLADAVQNCENPSMAPTKPTVGTRILEFDRTVRKGTGSVNV 62
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKC 113
+ELWD SGD +E+ WPA G I+V+++G G +L ++ +F + +C
Sbjct: 63 SVELWDVSGDRAYEAAWPAIMHGAMGAIYVYDAGNAGEEKDLDQWHRWFGQNMGFKDSQC 122
Query: 114 LLI-----DNVKPGR 123
+++ +VKP R
Sbjct: 123 MIMAHRKSQDVKPSR 137
>gi|167535955|ref|XP_001749650.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771798|gb|EDQ85459.1| predicted protein [Monosiga brevicollis MX1]
Length = 185
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTT---AEEYHPTQGVRIVECEHSYALDTSKTEIEL 57
++ K+ ++GP +GKT+LAN L D T + Y PTQG RI+E + S T +EL
Sbjct: 4 LRAKVALVGPAASGKTILANFLADHVTDGLSMPYRPTQGCRILETTME---NHSDTALEL 60
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD SGD ES WPA + G+I VF+ +L +++ F+ + + +++ L+
Sbjct: 61 WDVSGDINNESGWPAITTGLDGVIVVFDINQTVVDGDLDIWFRRFIKRPGVKSNQVLVFA 120
Query: 118 NVKPGRGDSSGHAHSL 133
N P R ++ A L
Sbjct: 121 N-NPHRDSATRSAVDL 135
>gi|242018415|ref|XP_002429672.1| hypothetical protein Phum_PHUM447150 [Pediculus humanus corporis]
gi|212514661|gb|EEB16934.1| hypothetical protein Phum_PHUM447150 [Pediculus humanus corporis]
Length = 377
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 22/129 (17%)
Query: 14 GKTVLANALCD-----LTTAE----EYHPTQGVRIVECEHSYALDTSKTE--------IE 56
GKT LAN L + + E + PT+ VRI+E + +D KT+ IE
Sbjct: 231 GKTALANFLYESYEKIINVNEGGGGDTKPTKAVRILE----FFVDGIKTKNVFQKKIAIE 286
Query: 57 LWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
LWD SG +++S WPA Q +V GIIFV +P +S L Y +FV +++ +CL++
Sbjct: 287 LWDCSGGSRYQSCWPAIQHEVQGIIFVHTDNLPEEVSSLRTLYHHFVEETNFPESRCLVV 346
Query: 117 DNVKPGRGD 125
N + G GD
Sbjct: 347 KN-QTGNGD 354
>gi|302844957|ref|XP_002954018.1| hypothetical protein VOLCADRAFT_106196 [Volvox carteri f.
nagariensis]
gi|300260830|gb|EFJ45047.1| hypothetical protein VOLCADRAFT_106196 [Volvox carteri f.
nagariensis]
Length = 192
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 3 IKILILGPIMAGKTVLANALCD---LTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
+KI ++GP GKT+L AL + L Y PT VRI E +D + +++ WD
Sbjct: 6 LKIAVVGPCRTGKTLLCRALAEQPILLGEMAYQPTAAVRIQEISRVLGID--RVKVQFWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
SG +++S WP +++ G++ + + P EL FY F ++L +C+++
Sbjct: 64 CSGSVQYQSYWPVLAKELDGLLLIIDPARPEQERELETFYRNFAEPNNLYTRQCMVM 120
>gi|159462878|ref|XP_001689669.1| flagellar ATPase, ras GTPase-like protein [Chlamydomonas
reinhardtii]
gi|156632335|gb|ABU90456.1| Rab-like intraflagellar transport protein 22 [Chlamydomonas
reinhardtii]
gi|158283657|gb|EDP09407.1| flagellar ATPase, ras GTPase-like protein [Chlamydomonas
reinhardtii]
Length = 192
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 3 IKILILGPIMAGKTVLANALCD---LTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
+KI ++GP GKT+L AL + L Y PT VRI E +D + +++ WD
Sbjct: 6 LKIAVVGPQRTGKTLLCRALAEQPILLGEMSYQPTAAVRIQEISRVLGID--RVKVQFWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
SG +++S WP ++V G++ V + P +L FY F ++L +C+++
Sbjct: 64 VSGSVQYQSYWPVLAKEVDGLLMVIDPNRPEQERDLETFYRNFAEPNNLYTRQCMVM 120
>gi|268534456|ref|XP_002632359.1| C. briggsae CBR-IFTA-2 protein [Caenorhabditis briggsae]
Length = 225
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 30/147 (20%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEE-----------------------YHPTQGV 37
K KILILGP AGKT L+ L D E Y PT+G
Sbjct: 6 QKGKILILGPPKAGKTTLSRFLADYAEEHESAKRGKKPKVDKEKKMEFEFNTPYMPTKGA 65
Query: 38 RIVECEHSYALDTSK------TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGH 91
RI E E LD+ + EI+LWD SGD K+E WPA + D G+I V N +
Sbjct: 66 RIQEFESHELLDSDRGKIIKDIEIQLWDVSGDRKYEDCWPAIKEDADGVILVANPE-EHN 124
Query: 92 ISELLLFYDYFVTQSDLNNHKCLLIDN 118
+L +++ FV + +++ ++ ++I N
Sbjct: 125 GKDLQIWFTEFVEKENISLNRVMVILN 151
>gi|432917693|ref|XP_004079547.1| PREDICTED: rab-like protein 5-like [Oryzias latipes]
Length = 155
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 39 IVECEHSYALDTSKT-EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLL 97
I+E E KT E+ELWD SGD +FES WPA +D G++ FN VP H+ E+
Sbjct: 12 ILEFESQLESRGDKTCEVELWDCSGDFRFESCWPALMKDCSGVVITFNPDVPSHLKEIET 71
Query: 98 FYDYFVTQSDLNNHKCLLIDNVKPGRGDSSGH 129
++ FV+ L + + LLI + KPG G
Sbjct: 72 WHSVFVSSQGLQDAQSLLIAHHKPGSEAEKGR 103
>gi|407848190|gb|EKG03646.1| hypothetical protein TCSYLVIO_005304 [Trypanosoma cruzi]
Length = 219
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---------HSYALDT 50
++KIL+LGP +GK+ +AN L L T + Y+ TQ +RI+E E + +
Sbjct: 5 RVKILVLGPSRSGKSTIANFLAGLRETPTKGYYETQPLRILEVEIGLDNLKVGGRHVVGP 64
Query: 51 SKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD--- 107
K ++LWD G K ++ W A + GII+VFN V G EL+L++ F D
Sbjct: 65 KKAIVQLWDLGGSSKHQAGWQAVAANADGIIYVFNPEVRGAEKELVLWHKNFALDQDKLD 124
Query: 108 -LNNHKCLLIDN 118
NN K + D
Sbjct: 125 ERNNFKVRVPDK 136
>gi|71405834|ref|XP_805503.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70868938|gb|EAN83652.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 219
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---------HSYALDT 50
++KIL+LGP +GK+ +AN L L T + Y+ TQ +RI+E E + +
Sbjct: 5 RVKILVLGPSRSGKSTIANFLAGLRETPTKGYYETQPLRILEVEIGLDNLKVGGRHVVGP 64
Query: 51 SKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD--- 107
K ++LWD G K ++ W A + GII+VFN V G EL+L++ F D
Sbjct: 65 KKAIVQLWDLGGSSKHQAGWQAVAANADGIIYVFNPEVRGAEKELVLWHKNFALDQDKLD 124
Query: 108 -LNNHKCLLIDN 118
NN K + D
Sbjct: 125 ERNNFKVRVPDK 136
>gi|154413615|ref|XP_001579837.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121914048|gb|EAY18851.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 188
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
MK+KI++LGP+ GKT L N + Y T G I++ + ++ ++++WDT
Sbjct: 1 MKVKIVLLGPMSVGKTALCNRFKYDKFEQNYQVTIGAGIID--YQTKVNGKSVDVQIWDT 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNH 111
+G + S+ P + RD IFV++ G I++L FYD F+ Q+D H
Sbjct: 59 AGMERHRSLSPLYYRDADAGIFVYDISEKGSINQLERFYDEFMAQNDRGFH 109
>gi|342186676|emb|CCC96163.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 219
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 3 IKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALDTS--------- 51
+KIL+LGP +GK+ + N L T + YH T +RI+E E ALD S
Sbjct: 6 VKILVLGPSKSGKSTITNFLAGTRDTPTKGYHETHPLRILEVE--IALDDSRRPGRQATG 63
Query: 52 --KTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDL- 108
K ++LWD G+ K ++ WPA + GII+V+N + G ELLL++ F D
Sbjct: 64 VRKAVVQLWDVGGNTKHQAGWPAVAVNADGIIYVYNPEIKGSEKELLLWHKNFALNQDEL 123
Query: 109 ---NNHKCLLIDN 118
NN K + +N
Sbjct: 124 DADNNFKFRVPNN 136
>gi|326437941|gb|EGD83511.1| hypothetical protein PTSG_04119 [Salpingoeca sp. ATCC 50818]
Length = 878
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 12/122 (9%)
Query: 14 GKTVLANALCDLTTAEE---YHPTQGVRIVECEHSYALDT---SKTEIELWDTSGDHKFE 67
GK+ LAN L D T+ + Y PT+G RI+E + DT S +ELWD SGD +E
Sbjct: 706 GKSHLANFLSDTITSTDGVDYLPTRGCRILEFDAE--TDTGRRSDMSVELWDVSGDMSYE 763
Query: 68 SVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN----VKPGR 123
+VWPA + HG I VF+ G ++L ++ FV ++ L + +C++ N P R
Sbjct: 764 NVWPAMAQGAHGAIIVFDINKMGQENDLGPWFKTFVKRAGLRSGQCVVFANNPSTESPTR 823
Query: 124 GD 125
D
Sbjct: 824 SD 825
>gi|154343511|ref|XP_001567701.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065033|emb|CAM43145.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 218
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 18/126 (14%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---HSYAL-------- 48
KIKI+++GP+ +GKT + N L T +Y+ T +RIVE E S +L
Sbjct: 5 KIKIIVVGPVKSGKTTITNFLSGTRETPMSKYYETNPLRIVETEIELDSMSLTDRRVVFS 64
Query: 49 ----DTSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF-V 103
T + +++WD SG+ K ++ WPA GIIFVFN V EL L++ F V
Sbjct: 65 GGDAKTKRVVVQIWDLSGNSKHQAGWPAVANKADGIIFVFNPAVKNGERELSLWHKTFAV 124
Query: 104 TQSDLN 109
QS+L+
Sbjct: 125 NQSELD 130
>gi|303285230|ref|XP_003061905.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456316|gb|EEH53617.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 93
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++GP GKT + T + EY PT GVR+ CE + T + ++LWD SGD
Sbjct: 1 KIVVVGPKECGKTTTCQLVAGATPSREYDPTAGVRVQTCERRVGMRTVR--VDLWDCSGD 58
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
K+++ +PA + G++ V++ PG +EL
Sbjct: 59 LKYQTCFPAMADGMDGLLIVYDPDEPGREAEL 90
>gi|71405991|ref|XP_805569.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869029|gb|EAN83718.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 219
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---------HSYALDT 50
++KIL+LGP +GK+ +AN L L T + Y+ TQ +RI+E E + +
Sbjct: 5 RVKILVLGPSRSGKSTIANFLAGLRETPTKGYYETQPLRILEVEIGLDNLKVGGRHVVGP 64
Query: 51 SKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD--- 107
+ ++LWD G K ++ W A + GII+VFN V G EL+L++ F D
Sbjct: 65 KRAIVQLWDLGGSSKHQAGWQAVAANADGIIYVFNPEVRGAEKELVLWHKNFALDQDKLD 124
Query: 108 -LNNHKCLLIDN 118
NN K + D
Sbjct: 125 ERNNFKVRVPDK 136
>gi|355715025|gb|AES05199.1| RAB, member RAS oncoprotein family-like 5 [Mustela putorius furo]
Length = 116
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 66 FESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGD 125
FES WPA RD HG++ VFN+ +P H+ E+ ++Y FV Q L + +CLLI + KPG G
Sbjct: 1 FESCWPALMRDSHGVVIVFNADLPSHLKEIEMWYSCFVQQQLLQDTQCLLIAHHKPGSGS 60
Query: 126 SSG 128
G
Sbjct: 61 DKG 63
>gi|407411220|gb|EKF33377.1| hypothetical protein MOQ_002756 [Trypanosoma cruzi marinkellei]
Length = 219
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---------HSYALDT 50
++KIL+LGP +GK+ +AN L + T + Y+ TQ +RI+E E + +
Sbjct: 5 RVKILVLGPSRSGKSTIANFLAGVRETPTKGYYETQPLRILEVEIGLDNLKVGGRHVVGP 64
Query: 51 SKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD--- 107
+ ++LWD G K ++ W A + GII+VFN V G EL+L++ F D
Sbjct: 65 KRAIVQLWDLGGSSKHQAGWQAVAANADGIIYVFNPEVRGAEKELVLWHKNFALDQDKLD 124
Query: 108 -LNNHKCLLIDN 118
NN K + D
Sbjct: 125 ERNNFKVRVPDK 136
>gi|401427377|ref|XP_003878172.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494419|emb|CBZ29721.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 218
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---HSYAL-------- 48
KIKI+++GP+ +GKT + N L T +Y+ T +RIVE E S L
Sbjct: 5 KIKIIVVGPVKSGKTTITNFLSGTRETATSKYYETNPLRIVETEIELDSMNLTERRVVFS 64
Query: 49 ----DTSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF-V 103
T + +++WD SG+ K ++ WPA GIIFVFN + EL L++ F V
Sbjct: 65 GGDAKTKRVLVQIWDLSGNSKHQAGWPAVASKADGIIFVFNPALKNGEKELSLWHKTFAV 124
Query: 104 TQSDLN 109
QS+L+
Sbjct: 125 NQSELD 130
>gi|402863374|ref|XP_003895992.1| PREDICTED: rab-like protein 5-like [Papio anubis]
Length = 109
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 36/128 (28%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KIL +GP +G++ H + TS TEI
Sbjct: 2 LKAKILFVGPCDSGES---------------------------HLHVYFTSSTEI----- 29
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
KFES WPA +D HG++ VF++ +P H E ++Y FV L + +C+LI + K
Sbjct: 30 ----KFESCWPALMKDAHGVVIVFSADIPSHQKETEMWYSCFVQHQSLQDTQCMLIAHHK 85
Query: 121 PGRGDSSG 128
PG GD G
Sbjct: 86 PGSGDDKG 93
>gi|341886128|gb|EGT42063.1| CBN-IFTA-2 protein [Caenorhabditis brenneri]
Length = 232
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 31/145 (21%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEE----------------------YHPTQGVRIVE 41
KIL+LGP AGKT L L D E Y PT+ RI E
Sbjct: 13 KILVLGPPKAGKTTLCRFLADFMEESEGSKKGEDPAERERKFEFEFTTTYMPTKAARIQE 72
Query: 42 CE-HSYALDT-------SKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
E H + D +EI LWD SGD K+E WPA + +V G+I V N
Sbjct: 73 FETHEFFQDAEHETRRLQDSEIHLWDVSGDRKYEDCWPAIKENVEGVILVANPE-EHKGK 131
Query: 94 ELLLFYDYFVTQSDLNNHKCLLIDN 118
+L L+Y FV + ++N + ++I N
Sbjct: 132 DLQLWYTEFVEKENINLNCVMVILN 156
>gi|302788304|ref|XP_002975921.1| FAP9, ras family GTPase-like protein [Selaginella moellendorffii]
gi|300156197|gb|EFJ22826.1| FAP9, ras family GTPase-like protein [Selaginella moellendorffii]
Length = 183
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K+ I+GP +GKT LA AL + Y PT GVRI E + T +ELWD
Sbjct: 17 LKVCIVGPKCSGKTALARALAGAPWESGRRYTPTVGVRIQEVSIN-----KNTTLELWDC 71
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
SGD ++E+ PA + G+I V+ P EL +Y F + L C +I V
Sbjct: 72 SGDARYEAYHPAVASNAEGLILVYTLSQPKQKLELEKWYHDFAAANHLPASVCQII-GVD 130
Query: 121 PGRGDSSGHAHSLR 134
G +S A R
Sbjct: 131 TGVNNSKASAMEGR 144
>gi|123427075|ref|XP_001307174.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121888788|gb|EAX94244.1| hypothetical protein TVAG_480610 [Trichomonas vaginalis G3]
Length = 229
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 8/90 (8%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTA--EEYHPTQGVRIVECEHSYALD----TSKTEI 55
++KI++ GP+ GK+ +AN L + + Y PT VRI+E S ALD + +I
Sbjct: 4 ELKIIVAGPLSCGKSEIANILSNASKGYTGNYTPTIAVRILE--FSSALDINGMQTSIDI 61
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFN 85
+LWDTSGD K+ WPA +D G++ V+N
Sbjct: 62 QLWDTSGDEKYSLTWPAIAKDADGMLLVYN 91
>gi|118395693|ref|XP_001030193.1| hypothetical protein TTHERM_01109840 [Tetrahymena thermophila]
gi|89284487|gb|EAR82530.1| hypothetical protein TTHERM_01109840 [Tetrahymena thermophila
SB210]
Length = 2364
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 31/137 (22%)
Query: 3 IKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSK-----TEI 55
+KI+I+GP +GKT +AN L + +++Y PT +RIVE ++ + I
Sbjct: 789 VKIIIIGPSQSGKTAIANYLANRLDGISKDYRPTAALRIVEFNREAPVNRKRPGQEMATI 848
Query: 56 ELWD------------------------TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGH 91
+LWD SGD ++E WPA Q++ HG + ++N+ P H
Sbjct: 849 QLWDGKIDLIIQSLVNSFYQLNYFLYQTVSGDPRYEPTWPAIQKNAHGCLMIYNAENPRH 908
Query: 92 ISELLLFYDYFVTQSDL 108
E+ +++ F +S +
Sbjct: 909 EQEIEGWFNNFANKSKM 925
>gi|398021178|ref|XP_003863752.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501985|emb|CBZ37069.1| hypothetical protein, conserved [Leishmania donovani]
Length = 218
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECE---HSYAL-------- 48
KIKI+++GP+ +GKT + N L T +Y+ T +RIVE E S L
Sbjct: 5 KIKIIVVGPVKSGKTTITNFLSGTRETATSKYYETNPLRIVETEIELDSMNLTDRRVVFS 64
Query: 49 ----DTSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF-V 103
T + +++WD SG+ K ++ WPA GIIFVF+ + EL L++ F V
Sbjct: 65 GGDAKTKRVLVQIWDLSGNSKHQAGWPAVANGADGIIFVFDPALRNGEKELSLWHKTFAV 124
Query: 104 TQSDLN 109
QS+L+
Sbjct: 125 NQSELD 130
>gi|146097034|ref|XP_001468015.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072381|emb|CAM71089.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 218
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 22/128 (17%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALD---------- 49
KIKI+++GP+ +GKT + N L T +Y+ T +RIVE E LD
Sbjct: 5 KIKIIVVGPVKSGKTTITNFLSGTRETATSKYYETNPLRIVETE--IELDSRNLTDRRVV 62
Query: 50 -------TSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF 102
T + +++WD SG+ K ++ WPA GIIFVF+ + EL L++ F
Sbjct: 63 FSGGDAKTKRVLVQIWDLSGNSKHQAGWPAVANGADGIIFVFDPALRNGEKELSLWHKTF 122
Query: 103 -VTQSDLN 109
V QS+L+
Sbjct: 123 AVNQSELD 130
>gi|157874327|ref|XP_001685647.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68128719|emb|CAJ08852.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 218
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 22/128 (17%)
Query: 2 KIKILILGPIMAGKTVLANALCDL--TTAEEYHPTQGVRIVECEHSYALD---------- 49
KIKI+++G + +GKT + N L T +Y+ T +RIVE E LD
Sbjct: 5 KIKIIVVGSVKSGKTTITNFLSGTRETATSKYYETNPLRIVETE--IELDSMNFTDRRVV 62
Query: 50 -------TSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF 102
T + +++WD SG+ K ++ WPA GIIFVFN + EL L++ F
Sbjct: 63 FSGGDAKTKRVLVQIWDLSGNSKHQAGWPAVANKADGIIFVFNPALKNGEKELSLWHKTF 122
Query: 103 -VTQSDLN 109
V QS+L+
Sbjct: 123 AVNQSELD 130
>gi|302770284|ref|XP_002968561.1| FAP9, ras family GTPase-like protein [Selaginella moellendorffii]
gi|300164205|gb|EFJ30815.1| FAP9, ras family GTPase-like protein [Selaginella moellendorffii]
Length = 183
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALDTSK-TEIELWD 59
+K+ I+GP +GKT LA AL + Y PT GVRI E L +K T +ELWD
Sbjct: 17 LKVCIVGPKCSGKTALARALAGAPWESGRRYTPTVGVRIQE------LSINKNTTLELWD 70
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
SGD ++E+ PA + G+I V+ P EL +Y F + L C +I V
Sbjct: 71 CSGDARYEAYHPAVASNAEGVILVYTLFQPKQKLELEKWYHDFAAANHLPASVCPII-GV 129
Query: 120 KPGRGDSSGHAHSLR 134
G +S A R
Sbjct: 130 DTGVNNSKASAMEGR 144
>gi|308464083|ref|XP_003094311.1| CRE-IFTA-2 protein [Caenorhabditis remanei]
gi|308247957|gb|EFO91909.1| CRE-IFTA-2 protein [Caenorhabditis remanei]
Length = 232
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 67/146 (45%), Gaps = 37/146 (25%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEE----------------------YHPTQGVRIVE 41
KIL+LGP AGKT L L D E Y PT+ RI E
Sbjct: 12 KILVLGPPKAGKTTLCRFLADFMEDNETLKKGEDSSERERKFEFEFTSNYVPTKAARIQE 71
Query: 42 CE-HSYALDTSKT--------EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHI 92
E H + ++ ++ EI LWD SGD K+E WPA + D G+I V N P
Sbjct: 72 FETHEFFAESQQSGTRRLQDSEIHLWDVSGDRKYEDCWPAIKEDAEGVILVAN---PEEH 128
Query: 93 S--ELLLFYDYFVTQSDLNNHKCLLI 116
S +L L++ FV + ++ +C+++
Sbjct: 129 SGKDLQLWFTEFVEKENI-KLECVMV 153
>gi|441649938|ref|XP_003276659.2| PREDICTED: rab-like protein 5 [Nomascus leucogenys]
Length = 146
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTSCEFEL 61
Query: 58 WDTSGDHKFES 68
WD GD K+ S
Sbjct: 62 WDCGGDAKYVS 72
>gi|149062982|gb|EDM13305.1| rCG21413, isoform CRA_a [Rattus norvegicus]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHKFES-------VWPAFQRDVH 78
WD GD S +WP R +
Sbjct: 62 WDCGGDSNNSSSKTVTACLWPTTNRGLE 89
>gi|321473028|gb|EFX83996.1| hypothetical protein DAPPUDRAFT_239205 [Daphnia pulex]
Length = 190
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 4 KILILGPIMAGKTVLANALCDLTTA-EEYHPTQGVRIVECEHSYALDTSK---------- 52
K+L+LGP +GKT LAN L D A +Y PT G RI+E + +++S+
Sbjct: 8 KVLLLGPTKSGKTTLANFLSDAKDAIGQYRPTVGCRILE----FQIESSQLAHHSSSRTN 63
Query: 53 ------TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+EI+LWD S D + PA D G++ V++ H +EL Y+ +
Sbjct: 64 NNNTNNSEIQLWDCSADRNVSNCLPALANDAAGVLLVYDITADDHTTELEELYNVWNNYL 123
Query: 107 DLNNHKCLLI 116
+L+ + L++
Sbjct: 124 ELSPSRYLIV 133
>gi|354477604|ref|XP_003501009.1| PREDICTED: rab-like protein 5-like [Cricetulus griseus]
Length = 124
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY+PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYNPTQGVRILEFENPHVTSNNKGTGCEFEL 61
Query: 58 WDTSGDHK 65
WD GD K
Sbjct: 62 WDCGGDSK 69
>gi|17542612|ref|NP_503073.1| Protein IFTA-2 [Caenorhabditis elegans]
gi|3880355|emb|CAB05299.1| Protein IFTA-2 [Caenorhabditis elegans]
Length = 252
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 54/116 (46%), Gaps = 34/116 (29%)
Query: 4 KILILGPIMAGKTVLANALCD-------LTTAEE---------------YHPTQGVRIVE 41
KIL+LGP AGKT L L D L E+ Y PT+GVRI E
Sbjct: 30 KILVLGPPKAGKTTLCTFLADFMEDGDTLKKGEDSGERERKFEFEFTSVYRPTKGVRIQE 89
Query: 42 CE-HSYALDTSK-----------TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFN 85
E H + + + +EI+LWD SGD K+E WPA + + G+I V N
Sbjct: 90 FETHEFFTEQEQNELGGTRRLEDSEIQLWDVSGDKKYEDCWPAIKENAEGVILVVN 145
>gi|345320715|ref|XP_001514324.2| PREDICTED: rab-like protein 5-like, partial [Ornithorhynchus
anatinus]
Length = 68
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKT+LAN L D + EYHPTQGVRI+E E+ +K E +L
Sbjct: 2 LKAKILFVGPSESGKTILANFLTDSSEITEYHPTQGVRILEFENPQVTSNNKGTMCEFQL 61
Query: 58 WDTSGDH 64
WD GD
Sbjct: 62 WDCGGDR 68
>gi|256088736|ref|XP_002580481.1| hypothetical protein [Schistosoma mansoni]
gi|360042853|emb|CCD78263.1| hypothetical protein Smp_174780 [Schistosoma mansoni]
Length = 154
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 34 TQGVRIVECEHSYALD--TSKTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGH 91
++ ++I+E E + SK E+ELWD SGD K+E+ WPA R HG++FV+N P H
Sbjct: 5 SEILQILEYEQKIKIKGKPSKVEVELWDASGDRKYETCWPAIFRGSHGVVFVYNPDNPYH 64
Query: 92 ISELLLFYDYFVTQSDLNNHKCLLIDNVKP 121
I +L +Y + L+ + +I + KP
Sbjct: 65 IDDLHNWYREVPSSLGLSEQQMCIICHKKP 94
>gi|255073227|ref|XP_002500288.1| predicted protein [Micromonas sp. RCC299]
gi|226515550|gb|ACO61546.1| predicted protein [Micromonas sp. RCC299]
Length = 190
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEE-YHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
+KI ++GP GKT+L L + A+ YHPT+G+RI E E + + ++L D S
Sbjct: 6 VKICVVGPQEGGKTLLCKLLAEQLPADRGYHPTKGLRIQEVERTGPGGIA-VNVQLRDCS 64
Query: 62 GD-HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD--LNNHKCLLIDN 118
GD + +PA D+ G+I V++ G EL +++ F T D L+ +CL++
Sbjct: 65 GDFEAYSQCFPAMALDMDGLIVVYDPDEEGKEPELERWHEAFSTVGDARLDPSQCLVL-G 123
Query: 119 VKPGRG 124
+ GRG
Sbjct: 124 IHRGRG 129
>gi|313220116|emb|CBY30978.1| unnamed protein product [Oikopleura dioica]
gi|313226740|emb|CBY21885.1| unnamed protein product [Oikopleura dioica]
Length = 173
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 64/127 (50%), Gaps = 14/127 (11%)
Query: 2 KIKILILGPIMAGKTVLANALC-DLTTA----EEYHPTQGVRIVECEHSYALDTSKTEIE 56
KIKI ++G AGKT+ N + + A E PT +R++E EH TS ++E
Sbjct: 4 KIKICVVGDRNAGKTIFCNLIAGQFSDAAQLLEHRRPTASLRVLEFEHEIDSKTS-IDVE 62
Query: 57 LWDTSGDHKFESVWPAFQRDVHG-IIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
LWD SGD + E +WP+F+ G IIF ++ + F DYFV + + LL
Sbjct: 63 LWDCSGDPEQEKIWPSFRHSCGGVIIFSRDTSIES-------FVDYFVESGAVQPEQSLL 115
Query: 116 IDNVKPG 122
N + G
Sbjct: 116 WINKEGG 122
>gi|154415646|ref|XP_001580847.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121915069|gb|EAY19861.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 188
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M + I ++G GKT +ANA+ + + EY PT G +V+ + D K +WDT
Sbjct: 1 MNLNISLIGDSAVGKTSIANAMAQIRFSTEYEPTIGASMVKI--PFEKDQQKYNFVIWDT 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSG---VPGHISELLLFYDYFVTQSDLNNHKCLLID 117
+G K++S+ P + RD I VF+ H+SE L Y + N+ LLI
Sbjct: 59 AGMEKYKSLAPVYYRDSKASIIVFDLNSIETLEHVSEWLNLYQSIAGE----NNPILLIG 114
Query: 118 N 118
N
Sbjct: 115 N 115
>gi|149420647|ref|XP_001521638.1| PREDICTED: rab-like protein 5-like, partial [Ornithorhynchus
anatinus]
Length = 75
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 66 FESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
FES WPA RD HG++ VFN+ VP H+ E+ +++ FV Q L + +CLLI + K
Sbjct: 1 FESCWPALMRDSHGVVIVFNADVPSHLKEIEMWHACFVQQQMLPDAQCLLIAHRK 55
>gi|355747559|gb|EHH52056.1| hypothetical protein EGM_12424 [Macaca fascicularis]
Length = 115
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIEL 57
+K KIL +GP +GKTVLAN L + + EY PTQGVRI+E E+ + +K E EL
Sbjct: 2 LKAKILFVGP--SGKTVLANFLTESSDITEYSPTQGVRILEFENPHVTSNNKGTGCEFEL 59
Query: 58 WDTSGDHK 65
WD GD K
Sbjct: 60 WDCGGDAK 67
>gi|154413028|ref|XP_001579545.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121913753|gb|EAY18559.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +KI++LG GKT + N C+ T E+ T G + +D ++ I LWDT
Sbjct: 8 LDLKIVVLGSAFVGKTSIINRYCNSTFIEDTLSTIGAGFFT--RTMNIDGTEVTIMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFV 103
+G+ +F SV P+ R +G++ V++ P ++ ++ + F+
Sbjct: 66 AGEERFRSVAPSLLRGANGLVLVYDLTQPNSFKDIDIYMEMFL 108
>gi|167383990|ref|XP_001736769.1| small GTPase rabh [Entamoeba dispar SAW760]
gi|165900735|gb|EDR26980.1| small GTPase rabh, putative [Entamoeba dispar SAW760]
Length = 198
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K+KI ++G + GKT L C T E+Y T G+ C+ S LD +++LWDT+
Sbjct: 4 KLKIGLIGDVGVGKTALIQRFCFGTYTEDYDATIGIET--CDKSVNLDGKMYQLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G K+ S+ + +D+ G++ VF
Sbjct: 62 GQEKYHSLVRLYFKDIKGVLLVFQ 85
>gi|67472941|ref|XP_652258.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469082|gb|EAL46872.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449704975|gb|EMD45121.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 198
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K+KI ++G + GKT L C T E+Y T G+ C+ S LD +++LWDT+
Sbjct: 4 KLKIGLIGDVGVGKTALIQRFCFGTYTEDYDATIGIET--CDKSVNLDGKMYQLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G K+ S+ + +D+ G++ VF
Sbjct: 62 GQEKYHSLVRLYFKDIKGVLLVFQ 85
>gi|123477817|ref|XP_001322074.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121904913|gb|EAY09851.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +KI++LGP GKT + N C+ T E T G + ++ + + +WDT
Sbjct: 4 LDLKIVVLGPAGVGKTCVINRYCNDTYLENTLSTIGAGFFP--QTVNINDVEVNMMIWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
+G+ +F+S+ P+ R +G++ +++ P +++ ++ + F+ D + K L +
Sbjct: 62 AGEERFKSIAPSLLRGANGLVLIYDVTSPDSFTDVDIYLNMFLDTVDYDQSKPLPV 117
>gi|449684634|ref|XP_002163372.2| PREDICTED: uncharacterized protein LOC100198192 [Hydra
magnipapillata]
Length = 408
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT--TAEEYHPTQGVRIVECEHSYALD-----TSKTE 54
KIKIL++GP +GKT L+N + D T T+ EY T+GVRI+E E +D T E
Sbjct: 4 KIKILVIGPKQSGKTFLSNFIADATESTSGEYRSTKGVRILEFEVE-GVDIGGNHTVNLE 62
Query: 55 IELWDTSGDHK 65
+ELWD SGD +
Sbjct: 63 VELWDCSGDQR 73
>gi|340059902|emb|CCC54299.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 159
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 52 KTEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF-VTQSDL-- 108
K ++LWD G KF++ WPA D GII+VFN V G ELLL+Y F + Q+ L
Sbjct: 6 KAIVQLWDVGGSSKFQAGWPAVALDADGIIYVFNPEVKGAEKELLLWYKNFALDQTQLDN 65
Query: 109 -NNHKCLLIDN 118
NN K + DN
Sbjct: 66 DNNFKKRVTDN 76
>gi|260799750|ref|XP_002594847.1| hypothetical protein BRAFLDRAFT_86014 [Branchiostoma floridae]
gi|229280084|gb|EEN50858.1| hypothetical protein BRAFLDRAFT_86014 [Branchiostoma floridae]
Length = 148
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 66 FESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGD 125
FE WPA Q++ +G++ VFN P H EL +Y +FV+Q + + +CL + KP D
Sbjct: 34 FEQCWPAIQQETNGVLLVFNPDQPNHDKELETWYSHFVSQQGMKDSQCLAFAHHKPSTSD 93
Query: 126 SS-GHAHSL 133
+ GH SL
Sbjct: 94 KARGHLSSL 102
>gi|195546891|ref|NP_001124293.1| rab-like protein 5 isoform c [Homo sapiens]
gi|195546894|ref|NP_001124294.1| rab-like protein 5 isoform c [Homo sapiens]
gi|332867846|ref|XP_003318736.1| PREDICTED: uncharacterized protein LOC741533 isoform 3 [Pan
troglodytes]
gi|332867848|ref|XP_003318737.1| PREDICTED: uncharacterized protein LOC741533 isoform 4 [Pan
troglodytes]
gi|332867850|ref|XP_003318738.1| PREDICTED: uncharacterized protein LOC741533 isoform 5 [Pan
troglodytes]
gi|395738250|ref|XP_003777053.1| PREDICTED: rab-like protein 5 [Pongo abelii]
gi|395738252|ref|XP_003777054.1| PREDICTED: rab-like protein 5 [Pongo abelii]
gi|395738254|ref|XP_003777055.1| PREDICTED: rab-like protein 5 [Pongo abelii]
gi|426357335|ref|XP_004045999.1| PREDICTED: rab-like protein 5 [Gorilla gorilla gorilla]
gi|71297145|gb|AAH38668.1| RABL5 protein [Homo sapiens]
gi|119570602|gb|EAW50217.1| RAB, member RAS oncogene family-like 5, isoform CRA_b [Homo
sapiens]
gi|119570605|gb|EAW50220.1| RAB, member RAS oncogene family-like 5, isoform CRA_b [Homo
sapiens]
gi|193785746|dbj|BAG51181.1| unnamed protein product [Homo sapiens]
gi|221042438|dbj|BAH12896.1| unnamed protein product [Homo sapiens]
Length = 108
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 75 RDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSG 128
+D HG++ VFN+ +P H E+ ++Y FV Q L + +C+LI + KPG GD G
Sbjct: 2 KDAHGVVIVFNADIPSHRKEMEMWYSCFVQQPSLQDTQCMLIAHHKPGSGDDKG 55
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ VPG L + D F+ Q+ D N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENFPFVVIGN 125
>gi|148229413|ref|NP_001089921.1| RAB, member RAS oncogene family-like 5 [Xenopus laevis]
gi|83405097|gb|AAI10738.1| MGC130925 protein [Xenopus laevis]
Length = 108
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 75 RDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRGDSSGH 129
+D HG+I VFN+ +P H+ E+ +++ F+ Q L ++CLL+ + KPG GD H
Sbjct: 2 KDSHGVIIVFNADIPSHLKEIDMWHSNFIQQQRLQENRCLLVAHKKPGSGDEREH 56
>gi|440298399|gb|ELP91035.1| GTP-binding protein YPTC1, putative [Entamoeba invadens IP1]
Length = 217
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
KIKI +LG + GKT + C T + Y T G+ I C+ +D I++WDT+
Sbjct: 15 KIKIGLLGDMGVGKTCIVQRFCFHTYKDLYESTIGIEI--CDKEVTVDGQMYPIQIWDTA 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F SV F D+ GI VF+
Sbjct: 73 GQERFRSVSRVFFNDIKGIFIVFS 96
>gi|440295991|gb|ELP88837.1| GTP-binding protein yptV1, putative [Entamoeba invadens IP1]
Length = 198
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K+KI ++G + GKT L C T +EY T G+ C+ S +D +++LWDT+
Sbjct: 4 KLKIGLIGDVGVGKTALLQRFCFGTYIDEYDATIGIET--CDKSVNVDGKLYQLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G K+ S+ + +D+ G++ VF
Sbjct: 62 GQEKYHSLVRLYFKDIKGVLLVFQ 85
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ VPG L + D F+ Q+ D N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENFPFVVIGN 125
>gi|328769209|gb|EGF79253.1| hypothetical protein BATDEDRAFT_89908 [Batrachochytrium
dendrobatidis JAM81]
Length = 159
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 2 KIKILILGPIMAGKTVLANALCDLT---TAEEYHPTQGVRIVECEHSYALDTS------- 51
K+ I ++GP GKT + N + +L+ + EYHPTQGVRI+E + D
Sbjct: 6 KVTIFVVGPSKVGKTAICNYIAELSDSINSSEYHPTQGVRILEFDRKIVSDGKTHKWKEL 65
Query: 52 KTEIELWDTSGDHKFESVWPAFQRD 76
E+ELWD SGD + + ++PA + +
Sbjct: 66 NLEVELWDCSGDSEPD-LFPAIKSN 89
>gi|303226280|emb|CBJ24907.1| rabl5 [Notoryctes typhlops]
Length = 47
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D HG++ VFN+ +P
Sbjct: 12 EFELWDCGGDTKFESCWPALMKDSHGVVIVFNANIP 47
>gi|123426729|ref|XP_001307099.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121888709|gb|EAX94169.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 203
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +KI++LGP+ GKT + N C+ + ++ T G ++ +D ++ LWDT
Sbjct: 10 LDLKIVVLGPLYVGKTSIINRYCNGSFMDKTLSTIGAGFFT--NTMMVDDTEVTTMLWDT 67
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
SG +F SV P+ R +G+I V++
Sbjct: 68 SGQERFRSVAPSLLRGANGMILVYD 92
>gi|2623647|gb|AAB86482.1| rab-like GTP-binding protein [Entamoeba histolytica]
Length = 219
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 7 ILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDHKF 66
++G + GKT L C T E+Y T G+ C+ S LD +++LWDT+G K+
Sbjct: 30 LIGDVGVGKTALIQRFCFGTYTEDYDATIGIET--CDKSVNLDGKMYQLQLWDTAGQEKY 87
Query: 67 ESVWPAFQRDVHGIIFVFN 85
S+ + +D+ G++ VF
Sbjct: 88 HSLVRLYFKDIKGVLLVFQ 106
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N +EY T G + E +D K +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKE--IEVDDKKVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDNV 119
+F+S+ AF R + VF+ +L + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPFMVLGNK 126
Query: 120 KPGRGDSS 127
G SS
Sbjct: 127 IDENGGSS 134
>gi|123504024|ref|XP_001328650.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121911596|gb|EAY16427.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +KI++LG GKT + C+ T PT G H+ +D + LWDT
Sbjct: 10 IDLKIVVLGSAGVGKTSIIYRYCNGTFQPGTMPTIGAGFFT--HNIEIDKKDVNLLLWDT 67
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
+G+ +F+SV P+ +G+I V++ EL +Y+ F+ + N + L I
Sbjct: 68 AGEERFKSVTPSLLHGANGMILVYDVTSKVSFKELSDYYEMFLETCEFKNGEDLPI 123
>gi|407866593|gb|EKG08335.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWD 59
+ KI+++G + GK+ +++ CD T E+ PT G+ C+ + +T +++WD
Sbjct: 5 LAYKIIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIGMDFKYCQSTTLEKKPRTVRLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVT 104
TSG +F ++ AF R+ +G++ F+ ++ +YD T
Sbjct: 65 TSGQDRFVTLTTAFYRNCNGVMLCFDITNRASFEDVDEWYDRLRT 109
>gi|71006046|ref|XP_757689.1| hypothetical protein UM01542.1 [Ustilago maydis 521]
gi|46097364|gb|EAK82597.1| hypothetical protein UM01542.1 [Ustilago maydis 521]
Length = 252
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
++I ++G AGKT L N L A+E PT G + + + T I++WD G
Sbjct: 27 LEICVVGLQAAGKTSLVNLLSSGQFADEMVPTVGFNMRKVR------SGNTTIKVWDIGG 80
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVP 89
+F S+W + R V I+FV +S VP
Sbjct: 81 QPRFRSMWERYCRGVSAIVFVVDSSVP 107
>gi|303226288|emb|CBJ24911.1| rabl5 [Macrotis lagotis]
Length = 47
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D HG++ VFN+ +P
Sbjct: 12 EFELWDCGGDTKFESCWPALMKDSHGVVIVFNAEIP 47
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 11 LKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKE--IQVDDKLVTLQIWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F S+ AF R + V++ + L ++D F+ Q D+N+
Sbjct: 69 QERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMND 116
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N +EY T G + E +D K +++WDT+G
Sbjct: 9 LKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKE--IEVDDKKVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + VF+ +L + D F+ Q SD +N +++ N
Sbjct: 67 QERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGN 125
>gi|195330871|ref|XP_002032126.1| GM23683 [Drosophila sechellia]
gi|194121069|gb|EDW43112.1| GM23683 [Drosophila sechellia]
Length = 186
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDH 64
+LILG AGK+ L + L ++ + V E S+ L+ S+ ++LWD +G+
Sbjct: 23 LLILGLDNAGKSTLTDRLAEIFNGDSKESNNQVS----EWSFTLNNSR--VQLWDINGEL 76
Query: 65 KFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
K +WP + + V +IFV +S +SE + +L+N L++ N K G
Sbjct: 77 KNRQIWPKYYKKVKVLIFVLDSTDAVRLSEARCVLCDVLMHQELDNVPLLIVSNKKDASG 136
Query: 125 DSS 127
S
Sbjct: 137 SLS 139
>gi|303226272|emb|CBJ24903.1| rabl5 [Didelphis virginiana]
gi|303226294|emb|CBJ24914.1| rabl5 [Trichosurus vulpecula]
gi|303226296|emb|CBJ24915.1| rabl5 [Macropus robustus]
gi|303226298|emb|CBJ24916.1| rabl5 [Potorous tridactylus]
Length = 47
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D HG++ +FN+ +P
Sbjct: 12 EFELWDCGGDTKFESCWPALMKDSHGVVIIFNADIP 47
>gi|443899172|dbj|GAC76503.1| GTP-binding ADP-ribosylation factor-like protein [Pseudozyma
antarctica T-34]
Length = 235
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
++I ++G AGKT L N L A+E PT G + + + T I++WD G
Sbjct: 25 LEICVVGLQAAGKTSLVNLLSSGQFADEMVPTVGFNMRKVR------SGNTTIKVWDIGG 78
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVP 89
+F S+W + R V I+FV +S VP
Sbjct: 79 QPRFRSMWERYCRGVSAIVFVVDSSVP 105
>gi|303226274|emb|CBJ24904.1| rabl5 [Rhyncholestes raphanurus]
gi|303226276|emb|CBJ24905.1| rabl5 [Caenolestes fuliginosus]
gi|303226278|emb|CBJ24906.1| rabl5 [Dromiciops gliroides]
gi|303226290|emb|CBJ24912.1| rabl5 [Perameles gunnii]
gi|303226292|emb|CBJ24913.1| rabl5 [Isoodon obesulus]
Length = 47
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D HG++ +FN+ +P
Sbjct: 12 EFELWDCGGDTKFESCWPALMKDSHGVVIIFNADIP 47
>gi|326432764|gb|EGD78334.1| Rab7 GTPase [Salpingoeca sp. ATCC 50818]
Length = 206
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E + +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVT--VDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ VP L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTVPRSFESLEAWRDEFLIQA 110
>gi|443711048|gb|ELU04995.1| hypothetical protein CAPTEDRAFT_19151 [Capitella teleta]
Length = 204
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVEC-EHSYALDTSKTEIELWD 59
+ KIL+LG GKT L + CD T E Y T G+ +C + LD + +WD
Sbjct: 9 LAFKILVLGDSSVGKTCLIHRYCDDTFYETYVSTIGI---DCKQRETMLDQIPVRLRIWD 65
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ A+ R GI+ VF+
Sbjct: 66 TAGQERFRTLTTAYYRGAQGILLVFD 91
>gi|303226300|emb|CBJ24917.1| rabl5 [Vombatus ursinus]
Length = 47
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 53 TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D HG++ +FN+ +P
Sbjct: 11 CEFELWDCGGDTKFESCWPALMKDSHGVVIIFNADIP 47
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D + I++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLT--KDVVIDDKEVTIQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ QS
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQS 110
>gi|123479343|ref|XP_001322830.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121905683|gb|EAY10607.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++ KI+I+G + GKT + N L E+Y PT G + + + D E+++WDT
Sbjct: 5 LEFKIVIIGSVAVGKTAITNRLQYQQFEEDYQPTIGAGYIP--YRTSCDGKDVELQIWDT 62
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +++S+ P + RD I V++
Sbjct: 63 AGMERYKSLGPIYYRDAVAAIIVYDQ 88
>gi|123501745|ref|XP_001328143.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121911082|gb|EAY15920.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 197
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+I+G M GKT + N L D + PT + + H D++ + LWDT+G
Sbjct: 9 KIVIVGDPMVGKTCIINRLVDDMFLADVEPTISPGLYKI-HLKMKDSTPVTLNLWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
KF + P + R+ G+ VF+ I L +YD D N K +I N
Sbjct: 68 EKFNCIVPIYARNSCGVFMVFDISNKQSIQNLEKWYDLVQAHVD-NQCKFFVIGN 121
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 11 LKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKE--IQVDDKLVTLQIWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F S+ AF R + V++ + L ++D F+ Q D+N+
Sbjct: 69 QERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMND 116
>gi|123471595|ref|XP_001318996.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901769|gb|EAY06773.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 189
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT +AN L EEY PT G + +Y D E+++WDT+G
Sbjct: 7 KVVMIGSVSVGKTAIANRLQFKRFDEEYQPTVGAGYIPYRTTY--DGKDIELQIWDTAGM 64
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+++S+ + RD + I V++
Sbjct: 65 ERYKSLGSIYYRDANAAIIVYD 86
>gi|440492002|gb|ELQ74604.1| GTPase Rab6/YPT6/Ryh1, small G protein superfamily
[Trachipleistophora hominis]
Length = 198
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L + + E YHPT G+ + + L + ++LWDT+
Sbjct: 4 KYKIVFLGNQSVGKTTLISQFTNKEADENYHPTIGIDFTYLKVN--LQGREVRLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P + R + I VF+
Sbjct: 62 GQERFNSIIPNYTRGAYAAIIVFD 85
>gi|289743679|gb|ADD20587.1| Rab protein 7 [Glossina morsitans morsitans]
Length = 208
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT + N + +Y T G C LD +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADF--CTKEVVLDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDWWRDEFLIQA 110
>gi|50540248|ref|NP_001002591.1| rho-related GTP-binding protein RhoE [Danio rerio]
gi|49900490|gb|AAH76009.1| Rho family GTPase 3b [Danio rerio]
Length = 223
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L N + E Y PT S+ +DT + E+ LWDT
Sbjct: 7 LKCKIVVVGDTQCGKTSLLNVFAKDSFPENYVPTVFENYTA---SFEVDTLRVELSLWDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ G P + +L
Sbjct: 64 SGSPYYDNVRPLSYPDADAVLICFDIGRPETLENVL 99
>gi|240849471|ref|NP_001155484.1| ras-related protein Rab-7-like [Acyrthosiphon pisum]
gi|239791100|dbj|BAH72062.1| ACYPI002607 [Acyrthosiphon pisum]
Length = 209
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ PG L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQA 110
>gi|294945302|ref|XP_002784612.1| hypothetical protein Pmar_PMAR021004 [Perkinsus marinus ATCC 50983]
gi|239897797|gb|EER16408.1| hypothetical protein Pmar_PMAR021004 [Perkinsus marinus ATCC 50983]
Length = 387
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTT--------AEEYHPTQGVRIVECEHSYALDTSK 52
M +KI +LGP +GKT +AN L ++ +Y PT GVRI++ E +
Sbjct: 26 MTMKIAVLGPRRSGKTTIANILGEVPIIHLEGAGGEAKYAPTCGVRILDIETDEGV---- 81
Query: 53 TEIELWDTSGD-HKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+ELWD SGD F++ + Q G+I V++ + E+
Sbjct: 82 -AVELWDVSGDVGDFDACYRTVQHGCDGVILVYDPNERAQVKEV 124
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE--VIVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDNV 119
+F+S+ AF R + VF+ P L + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN- 125
Query: 120 KPGRGDSSGHAHSLRR 135
+ D A S++R
Sbjct: 126 ---KVDLDNRAVSVKR 138
>gi|60459922|gb|AAX20132.1| ras-like protein Rnd3b [Danio rerio]
Length = 224
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L N + E Y PT S+ +DT + E+ LWDT
Sbjct: 8 LKCKIVVVGDTQCGKTSLLNVFAKDSFPENYVPTVFENYTA---SFEVDTLRVELSLWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ G P + +L
Sbjct: 65 SGSPYYDNVRPLSYPDADAVLICFDIGRPETLENVL 100
>gi|443722950|gb|ELU11591.1| hypothetical protein CAPTEDRAFT_21782 [Capitella teleta]
Length = 205
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDNV 119
+F+S+ AF R + V++ VP L + D F+ Q+ D N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTVPNTFKTLDSWRDEFLIQASPRDPENFPFVVIGN- 125
Query: 120 KPGRGDSSGHAHSLRR 135
+ D A S RR
Sbjct: 126 ---KIDLENRAVSTRR 138
>gi|330799117|ref|XP_003287594.1| Rab GTPase [Dictyostelium purpureum]
gi|325082380|gb|EGC35863.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +KIL++G GK+ + D + Y T GV C + LD K ++++WDT
Sbjct: 32 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDF--CIRTIELDGKKIKLQIWDT 89
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN---SGVPGHISELLLFYDYFVTQSDLN---NHKCL 114
+G +F+++ ++ R HG+I V++ I L+ D F + S L +KC
Sbjct: 90 AGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCD 149
Query: 115 LIDN 118
L D
Sbjct: 150 LKDK 153
>gi|289743677|gb|ADD20586.1| Ras-related protein Rab-7 [Glossina morsitans morsitans]
Length = 208
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT + N + +Y T G C LD +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADF--CTKEVVLDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQA 110
>gi|387593245|gb|EIJ88269.1| hypothetical protein NEQG_01713 [Nematocida parisii ERTm3]
gi|387596043|gb|EIJ93665.1| hypothetical protein NEPG_01237 [Nematocida parisii ERTm1]
Length = 212
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++KI+ILGP AGKT L A + A+ PT G +IV E ++ +K EIE+ D
Sbjct: 16 RLKIVILGPDNAGKTSLLRAYLNQNIAD-IKPTYGYQIVNTEME--VEKNKYEIEILDIG 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNS 86
G + W + V G++FV+++
Sbjct: 73 GQKSIRAYWDTYYSGVDGVLFVYDT 97
>gi|195572728|ref|XP_002104347.1| GD18492 [Drosophila simulans]
gi|194200274|gb|EDX13850.1| GD18492 [Drosophila simulans]
Length = 186
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDH 64
+LILG AGK+ L + L ++ + V E S+ L+ S+ ++LWD +G+
Sbjct: 23 LLILGLDNAGKSTLTDRLAEILNGDSKESNNEVS----EWSFTLNNSR--VQLWDINGEL 76
Query: 65 KFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
K +WP + + V +IFV +S +SE + +L+N L++ N K G
Sbjct: 77 KNRQIWPKYYKKVKVLIFVLDSTDAVRLSEARCVLCDVLMHQELDNVPLLIVSNKKDVSG 136
Query: 125 DSS 127
S
Sbjct: 137 SLS 139
>gi|195452908|ref|XP_002073553.1| GK14177 [Drosophila willistoni]
gi|194169638|gb|EDW84539.1| GK14177 [Drosophila willistoni]
Length = 207
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ P L + D F+ Q+ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRN 114
>gi|198468945|ref|XP_002134171.1| GA22382 [Drosophila pseudoobscura pseudoobscura]
gi|198146645|gb|EDY72798.1| GA22382 [Drosophila pseudoobscura pseudoobscura]
Length = 205
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M K+L+LG GKT L +YH + GV + H + ++ +WD
Sbjct: 1 MHFKLLLLGDSGVGKTSLLQRFTGGRFTAQYHSSVGVEL--GMHYIEVAGEVVQLLIWDA 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVT--QSDLN----NHKCL 114
SG+ +F + P + R+VHGI+ V+++ P L + D T + D++ +KC
Sbjct: 59 SGEKRFRPLLPTYYREVHGILLVYDATNPSSFKSLPSWLDEIETFGKQDVSIVLVGNKCE 118
Query: 115 LIDNVK 120
++N K
Sbjct: 119 DLENRK 124
>gi|440297914|gb|ELP90555.1| hypothetical protein EIN_019940 [Entamoeba invadens IP1]
Length = 204
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+LI+G GKT + CD E T GV + +D+ K +++LWDT+G
Sbjct: 14 KVLIIGESGVGKTAVLERYCDNVFNESLLSTVGVDFKA--KYFTIDSKKIKVQLWDTAGQ 71
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
KF ++ ++ R HG I F+
Sbjct: 72 EKFRNITSSYYRGTHGCIVAFD 93
>gi|170046123|ref|XP_001850628.1| ras-related protein Rab-7 [Culex quinquefasciatus]
gi|167869001|gb|EDS32384.1| ras-related protein Rab-7 [Culex quinquefasciatus]
Length = 208
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKE--VVIDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQA 110
>gi|24648858|ref|NP_650994.1| CG17819 [Drosophila melanogaster]
gi|7300791|gb|AAF55935.1| CG17819 [Drosophila melanogaster]
gi|21430494|gb|AAM50925.1| LP07781p [Drosophila melanogaster]
gi|220950196|gb|ACL87641.1| CG17819-PA [synthetic construct]
gi|220959206|gb|ACL92146.1| CG17819-PA [synthetic construct]
Length = 186
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDH 64
+LILG AGK+ L + L ++ E V E S+ ++ + ++LWD +G+
Sbjct: 23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVS----EWSFTINNFR--VQLWDINGEL 76
Query: 65 KFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
K +WP + + V+ +IFV +S +SE + +L+N L++ N K G
Sbjct: 77 KNRQIWPKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASG 136
Query: 125 DSS 127
S
Sbjct: 137 SLS 139
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +KIL++G GK+ + D + Y T GV C + LD K ++++WDT
Sbjct: 32 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDF--CIRTIELDGKKIKLQIWDT 89
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ ++ R HG+I V++
Sbjct: 90 AGQERFKTITTSYYRGAHGLIIVYD 114
>gi|299472956|emb|CBN77357.1| ARFRP1, ARF-like Ras superfamily GTPase [Ectocarpus siliculosus]
Length = 194
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
+I +LILG AGKT L + + + P + + +D ++ WD
Sbjct: 17 EINVLILGLDYAGKTTLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLG 76
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
G + S+W + D HG+IFV +S G E + +D Q +L+ +++ N
Sbjct: 77 GQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLAN 133
>gi|407392837|gb|EKF26431.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi
marinkellei]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTS--KTEIELW 58
+ KI+++G + GK+ +++ CD T E+ PT G+ C HS L+ +++W
Sbjct: 5 LAYKIIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIGMDFKYC-HSTTLEKKPRTVRLQIW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DTSG +F ++ AF R+ +G++ F+
Sbjct: 64 DTSGQDRFVTLTTAFYRNCNGVMLCFD 90
>gi|307214063|gb|EFN89256.1| ADP-ribosylation factor-like protein 13B [Harpegnathos saltator]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
I +LI+G AGK+++ N + + PT G R+V +H L ++++D G
Sbjct: 15 IILLIVGLDNAGKSLILNHISG-DPDQNVLPTMGFRMVSLKHKSYL------VKIYDVGG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+ ++WP + D+HG+I+V ++ ++E + ++ +T ++ LL+ N
Sbjct: 68 SSQIRALWPKYYNDIHGLIYVVDASDISRLAENKVVFNELITHEHISTKPLLLLAN 123
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKE--VLVDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + V+++ P L + D F+ Q+ D +N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFPFVVIGN 125
>gi|71406977|ref|XP_805986.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL
Brener]
gi|70869598|gb|EAN84135.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTS--KTEIELW 58
+ KI+++G + GK+ +++ CD T E+ PT G+ C HS L+ +++W
Sbjct: 5 LAYKIIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIGMDFKYC-HSTTLEKKPRTVRLQIW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DTSG +F ++ AF R+ +G++ F+
Sbjct: 64 DTSGQDRFVTLTTAFYRNCNGVMLCFD 90
>gi|254574478|ref|XP_002494348.1| GTP-binding protein [Komagataella pastoris GS115]
gi|238034147|emb|CAY72169.1| GTP-binding protein [Komagataella pastoris GS115]
gi|328353835|emb|CCA40232.1| Ras-related protein Rab-7A [Komagataella pastoris CBS 7435]
Length = 205
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + +++Y T G + E +D I+LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNRKFSQQYKATIGADFLTKE--LVIDNKNVTIQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ ++ + D F+ Q+++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTNNKSYDNVVSWKDEFLVQANIKN 114
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ VP L + D F+ Q+ D N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENFPFVVIGN 125
>gi|56967662|gb|AAW31980.1| CG2532 [Drosophila melanogaster]
gi|56967664|gb|AAW31981.1| CG2532 [Drosophila melanogaster]
gi|56967668|gb|AAW31983.1| CG2532 [Drosophila melanogaster]
gi|56967674|gb|AAW31986.1| CG2532 [Drosophila melanogaster]
gi|56967676|gb|AAW31987.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
KIL+LG I GK+ L D E++ T G+ R+ E L +++WDT+
Sbjct: 9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVE----LAGRMVMLQIWDTA 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
GD +F+S+ P++ R HGI+ V++
Sbjct: 65 GDERFKSLLPSYYRGAHGILLVYD 88
>gi|56967666|gb|AAW31982.1| CG2532 [Drosophila melanogaster]
gi|56967678|gb|AAW31988.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
KIL+LG I GK+ L D E++ T G+ R+ E L +++WDT+
Sbjct: 9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVE----LAGRMVMLQIWDTA 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
GD +F+S+ P++ R HGI+ V++
Sbjct: 65 GDERFKSLLPSYYRGAHGILLVYD 88
>gi|71406428|ref|XP_805752.1| small GTP-binding protein Rab7 [Trypanosoma cruzi strain CL
Brener]
gi|70869283|gb|EAN83901.1| small GTP-binding protein Rab7, putative [Trypanosoma cruzi]
Length = 221
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTS--KTEIELW 58
+ KI+++G + GK+ +++ CD T E+ PT G+ C HS L+ +++W
Sbjct: 5 LAYKIIVIGNVGVGKSNVSSRYCDGTFYEDIVPTIGMDFKYC-HSTTLEKKPRTVRLQIW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DTSG +F ++ AF R+ +G++ F+
Sbjct: 64 DTSGQDRFVTLTTAFYRNCNGVMLCFD 90
>gi|303226282|emb|CBJ24908.1| rabl5 [Phascogale tapoatafa]
gi|303226284|emb|CBJ24909.1| rabl5 [Dasyurus geoffroii]
gi|303226286|emb|CBJ24910.1| rabl5 [Sminthopsis crassicaudata]
Length = 47
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 54 EIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
E ELWD GD KFES WPA +D G++ +FN+ +P
Sbjct: 12 EFELWDCGGDRKFESCWPALMKDSQGVVIIFNADIP 47
>gi|56967660|gb|AAW31979.1| CG2532 [Drosophila melanogaster]
gi|56967672|gb|AAW31985.1| CG2532 [Drosophila melanogaster]
Length = 174
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQG----VRIVECEHSYALDTSKTEIELWD 59
KIL+LG I GK+ L D E++ T G VR VE L +++WD
Sbjct: 9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVE------LAGRMVMLQIWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+GD +F+S+ P++ R HGI+ V++
Sbjct: 63 TAGDERFKSLLPSYYRGAHGILLVYD 88
>gi|347966247|ref|XP_321482.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|347966249|ref|XP_001689335.2| AGAP001617-PB [Anopheles gambiae str. PEST]
gi|333470146|gb|EAA00927.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|333470147|gb|EDO63240.2| AGAP001617-PB [Anopheles gambiae str. PEST]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKE--VVIDERVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQA 110
>gi|194768220|ref|XP_001966211.1| GF19340 [Drosophila ananassae]
gi|190623096|gb|EDV38620.1| GF19340 [Drosophila ananassae]
Length = 237
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KIL++G GK+ L D + ++ T G+ C + L + ++++WDT+G
Sbjct: 8 FKILVVGDSGVGKSCLLRRFADGRFSGQHQSTVGIDFKVC--TVELGGNVVKLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+ +F S+ PA+ R HGI+ V+++
Sbjct: 66 EERFHSLLPAYYRGAHGILLVYDT 89
>gi|195392371|ref|XP_002054831.1| GJ24655 [Drosophila virilis]
gi|194152917|gb|EDW68351.1| GJ24655 [Drosophila virilis]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE--VIVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQA 110
>gi|195108353|ref|XP_001998757.1| GI24142 [Drosophila mojavensis]
gi|193915351|gb|EDW14218.1| GI24142 [Drosophila mojavensis]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|17865835|ref|NP_524472.1| Rab7, isoform A [Drosophila melanogaster]
gi|386766374|ref|NP_001247276.1| Rab7, isoform B [Drosophila melanogaster]
gi|386766376|ref|NP_001247277.1| Rab7, isoform C [Drosophila melanogaster]
gi|8118580|gb|AAF73041.1|AF263363_1 small ras-like GTPase RAB7 [Drosophila melanogaster]
gi|3426326|gb|AAC32270.1| small ras-like GTPase [Drosophila melanogaster]
gi|6561905|dbj|BAA88245.1| Rab7 protein [Drosophila melanogaster]
gi|7301083|gb|AAF56218.1| Rab7, isoform A [Drosophila melanogaster]
gi|16648020|gb|AAL25275.1| GH03685p [Drosophila melanogaster]
gi|116806766|emb|CAL26809.1| CG5915 [Drosophila melanogaster]
gi|116806768|emb|CAL26810.1| CG5915 [Drosophila melanogaster]
gi|116806770|emb|CAL26811.1| CG5915 [Drosophila melanogaster]
gi|116806772|emb|CAL26812.1| CG5915 [Drosophila melanogaster]
gi|116806774|emb|CAL26813.1| CG5915 [Drosophila melanogaster]
gi|116806776|emb|CAL26814.1| CG5915 [Drosophila melanogaster]
gi|116806778|emb|CAL26815.1| CG5915 [Drosophila melanogaster]
gi|116806780|emb|CAL26816.1| CG5915 [Drosophila melanogaster]
gi|116806782|emb|CAL26817.1| CG5915 [Drosophila melanogaster]
gi|116806784|emb|CAL26818.1| CG5915 [Drosophila melanogaster]
gi|116806786|emb|CAL26819.1| CG5915 [Drosophila melanogaster]
gi|220944908|gb|ACL84997.1| Rab7-PA [synthetic construct]
gi|220954800|gb|ACL89943.1| Rab7-PA [synthetic construct]
gi|223967661|emb|CAR93561.1| CG5915-PA [Drosophila melanogaster]
gi|223967663|emb|CAR93562.1| CG5915-PA [Drosophila melanogaster]
gi|223967665|emb|CAR93563.1| CG5915-PA [Drosophila melanogaster]
gi|223967667|emb|CAR93564.1| CG5915-PA [Drosophila melanogaster]
gi|223967669|emb|CAR93565.1| CG5915-PA [Drosophila melanogaster]
gi|223967671|emb|CAR93566.1| CG5915-PA [Drosophila melanogaster]
gi|223967673|emb|CAR93567.1| CG5915-PA [Drosophila melanogaster]
gi|223967675|emb|CAR93568.1| CG5915-PA [Drosophila melanogaster]
gi|223967677|emb|CAR93569.1| CG5915-PA [Drosophila melanogaster]
gi|223967679|emb|CAR93570.1| CG5915-PA [Drosophila melanogaster]
gi|223967681|emb|CAR93571.1| CG5915-PA [Drosophila melanogaster]
gi|294661911|gb|ADF28796.1| MIP21169p [Drosophila melanogaster]
gi|383292915|gb|AFH06594.1| Rab7, isoform B [Drosophila melanogaster]
gi|383292916|gb|AFH06595.1| Rab7, isoform C [Drosophila melanogaster]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|195037102|ref|XP_001990004.1| GH18481 [Drosophila grimshawi]
gi|193894200|gb|EDV93066.1| GH18481 [Drosophila grimshawi]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|194910038|ref|XP_001982062.1| GG11243 [Drosophila erecta]
gi|195504976|ref|XP_002099310.1| GE23436 [Drosophila yakuba]
gi|190656700|gb|EDV53932.1| GG11243 [Drosophila erecta]
gi|194185411|gb|EDW99022.1| GE23436 [Drosophila yakuba]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDEFLIQA 110
>gi|312372342|gb|EFR20324.1| hypothetical protein AND_20302 [Anopheles darlingi]
Length = 192
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKE--VVIDERVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQA 110
>gi|328866963|gb|EGG15346.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 199
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +KIL++G GK+ + D + Y T GV C + LD + ++++WDT
Sbjct: 30 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDF--CIRTIELDGKRIKLQIWDT 87
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ ++ R HG+I V++
Sbjct: 88 AGQERFKTITTSYYRGAHGLIIVYD 112
>gi|194742714|ref|XP_001953846.1| GF17031 [Drosophila ananassae]
gi|190626883|gb|EDV42407.1| GF17031 [Drosophila ananassae]
gi|269972614|emb|CBE66887.1| CG5915-PA [Drosophila ananassae]
gi|269972616|emb|CBE66888.1| CG5915-PA [Drosophila ananassae]
gi|269972618|emb|CBE66889.1| CG5915-PA [Drosophila ananassae]
gi|269972620|emb|CBE66890.1| CG5915-PA [Drosophila ananassae]
gi|269972622|emb|CBE66891.1| CG5915-PA [Drosophila ananassae]
gi|269972624|emb|CBE66892.1| CG5915-PA [Drosophila ananassae]
gi|269972628|emb|CBE66894.1| CG5915-PA [Drosophila ananassae]
gi|269972630|emb|CBE66895.1| CG5915-PA [Drosophila ananassae]
gi|269972632|emb|CBE66896.1| CG5915-PA [Drosophila ananassae]
gi|269972634|emb|CBE66897.1| CG5915-PA [Drosophila ananassae]
gi|269973057|emb|CBE67073.1| CG5915-PA [Drosophila phaeopleura]
Length = 207
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|312285796|gb|ADQ64588.1| hypothetical protein [Bactrocera oleae]
Length = 208
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYINKRFSNQYKATIGADF--CTKEVIADDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQA 110
>gi|56967670|gb|AAW31984.1| CG2532 [Drosophila melanogaster]
Length = 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDT 60
KIL+LG I GK+ L D E++ T G+ R+ E L +++WDT
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVE----LAGRMVMLQIWDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+GD +F+S+ P++ R HGI+ V++
Sbjct: 64 AGDERFKSLLPSYYRGAHGILLVYD 88
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLSKE--VRVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ P L + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNFPFVVLGN 125
>gi|269972612|emb|CBE66886.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|56967692|gb|AAW31995.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKA--RSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|56967690|gb|AAW31994.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|320164276|gb|EFW41175.1| GTPase [Capsaspora owczarzaki ATCC 30864]
Length = 203
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPT-QGVRIVECEHSYALDTSKTEIE------L 57
+LILG AGKT L T + Y+P G+ + + + L+ +K +I
Sbjct: 20 VLILGLDNAGKTTLLE-----RTKQLYNPGYAGIPMNKITTTVGLNVAKVDIADKNRIIF 74
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLID 117
WD G +S+W + + HG+++V +S P I + +D V S+L N L++
Sbjct: 75 WDLGGQTSLQSLWNKYYEEAHGVVYVVDSSDPDRIRQSQEAFDQLVGDSNLENVPILVLA 134
Query: 118 N 118
N
Sbjct: 135 N 135
>gi|281200877|gb|EFA75091.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 221
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +KIL++G GK+ + D + Y T GV C + LD + ++++WDT
Sbjct: 39 MLLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDF--CIRTIELDGKRIKLQIWDT 96
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ ++ R HG+I V++
Sbjct: 97 AGQERFKTITTSYYRGAHGLIIVYD 121
>gi|67478752|ref|XP_654758.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56471828|gb|EAL49370.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708853|gb|EMD48232.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 208
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
KIKI +LG + GKT + C + Y T G+ + E +D I++WDT+
Sbjct: 4 KIKIGLLGDMGVGKTCIVQRFCFHKYNDLYESTIGIEVFNQE--VVVDNQSYPIQIWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVF 84
G +F SV F D+ GI VF
Sbjct: 62 GQERFRSVSRVFFNDIKGIFIVF 84
>gi|56967688|gb|AAW31993.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|56967686|gb|AAW31992.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|24641019|ref|NP_572627.1| RabX2 [Drosophila melanogaster]
gi|7291151|gb|AAF46585.1| RabX2 [Drosophila melanogaster]
gi|56967698|gb|AAW31998.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|56967684|gb|AAW31991.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKA--RSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|195144966|ref|XP_002013467.1| GL23391 [Drosophila persimilis]
gi|198477435|ref|XP_002136615.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
gi|194102410|gb|EDW24453.1| GL23391 [Drosophila persimilis]
gi|198142907|gb|EDY71619.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|56967682|gb|AAW31990.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKA--RSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|56967680|gb|AAW31989.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|24641152|ref|NP_727472.1| Rab at 9Fb [Drosophila melanogaster]
gi|22832069|gb|AAN09277.1| Rab at 9Fb [Drosophila melanogaster]
gi|90855733|gb|ABE01228.1| IP08727p [Drosophila melanogaster]
gi|220952298|gb|ACL88692.1| Rab9Fb-PA [synthetic construct]
gi|220958860|gb|ACL91973.1| Rab9Fb-PA [synthetic construct]
Length = 214
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQG----VRIVECEHSYALDTSKTEIELW 58
KIL+LG I GK+ L D E++ T G VR VE + +++W
Sbjct: 8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVM------LQIW 61
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+GD +F+S+ P++ R HGI+ V++
Sbjct: 62 DTAGDERFKSLLPSYYRGAHGILLVYD 88
>gi|189459078|gb|ACD99525.1| IP21173p [Drosophila melanogaster]
Length = 198
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 11 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 69 DKRFNSLMPSNYRSAHGILLVYD 91
>gi|348688127|gb|EGZ27941.1| hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae]
Length = 207
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E LD +++WDT+G
Sbjct: 9 LKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKE--IMLDDKLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P +L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQA 110
>gi|340506147|gb|EGR32356.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 248
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+ LG GKT + E+ HPT GV + S LD ++LWDT
Sbjct: 20 IKHKIIFLGDQYVGKTCIIERFMYDVFDEKSHPTVGVDFLA--KSIKLDDKNIRLQLWDT 77
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F S+ P++ RD I VF+
Sbjct: 78 AGQERFRSLIPSYLRDATCAIIVFD 102
>gi|291490803|gb|ADE06717.1| FI12033p [Drosophila melanogaster]
Length = 198
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L+LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 11 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 69 DKRFNSLMPSNYRSAHGILLVYD 91
>gi|321448228|gb|EFX61364.1| hypothetical protein DAPPUDRAFT_69789 [Daphnia pulex]
Length = 141
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ +G GK+ + N ++PT G+ V + + ++LWDT+
Sbjct: 1 KFKIVFIGDQSVGKSSIINRFIKNEFDSAHNPTVGIDFVS--KNVTVKEKSVRLQLWDTA 58
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDY 101
G +F S+ P + RD H + VF+ L ++ DY
Sbjct: 59 GQERFRSLIPGYLRDSHAVFLVFDVTNADSFQNLNMWLDY 98
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D ++LWDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKE--LQIDDKLVTLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q+D
Sbjct: 67 QERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQAD 111
>gi|301117014|ref|XP_002906235.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
gi|262107584|gb|EEY65636.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
Length = 206
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E LD +++WDT+G
Sbjct: 9 LKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKE--IMLDDKLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P +L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQA 110
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + S +D + I+LWDT+G
Sbjct: 8 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLT--KSVEVDDQQVTIQLWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ L + D F+ Q+
Sbjct: 66 QERFQSLGVAFYRGADCCVLVFDVNSSKSFQALEGWRDEFLIQA 109
>gi|440298528|gb|ELP91160.1| hypothetical protein EIN_480990 [Entamoeba invadens IP1]
Length = 198
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+L+LG GK+ + + LC + + Y T GV L+ + +++LWD++G
Sbjct: 8 LKVLLLGESGVGKSAICHRLCKDSFTDIYTSTIGVEYAP--KYIDLENNTLKVQLWDSAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+++ + R +G+I VF+ ++++ +YD +++S+
Sbjct: 66 QERFKNITRCYYRSTNGVILVFDMTQRESFNKVVEWYDDVMSKSE 110
>gi|313213249|emb|CBY37091.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKE--VLVDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + V+++ P L + D F+ Q+ D +N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWGDEFLIQASPRDPDNFPFVVIGN 125
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D ++LWDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKE--LQIDDKLVTLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q+D
Sbjct: 67 QERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQAD 111
>gi|67483708|ref|XP_657074.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537445|dbj|BAB40677.1| small GTPase RabH [Entamoeba histolytica]
gi|56474312|gb|EAL51688.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 208
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
KIKI +LG + GKT + C + Y T G+ + + E +D I++WDT+
Sbjct: 4 KIKIGLLGDMGVGKTCIVQRFCFHKYRDLYESTIGIEMSDQE--VVVDNQSYPIQIWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVF 84
G +F SV F D+ GI VF
Sbjct: 62 GQERFRSVSRVFFNDIKGIFIVF 84
>gi|269972626|emb|CBE66893.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G C ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADF--CTKEVVVNDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQA 110
>gi|405954307|gb|EKC21785.1| Ras-related protein Rab-7a [Crassostrea gigas]
gi|405961849|gb|EKC27591.1| Ras-related protein Rab-7a [Crassostrea gigas]
Length = 205
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ +P L + D F+ Q+ D N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPFVVIGN 125
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQA 110
>gi|195166990|ref|XP_002024317.1| GL14977 [Drosophila persimilis]
gi|194107690|gb|EDW29733.1| GL14977 [Drosophila persimilis]
Length = 211
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M K+L+LG GKT L +YH + GV + H + ++ +WD
Sbjct: 1 MHFKLLLLGDSGVGKTSLLQRFMGGRFTAKYHSSVGVEL--GMHYIEVAGEVVQLLIWDA 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
SG+ +F + P + R+VHGI+ V+++ P L + D
Sbjct: 59 SGEKRFRPLLPTYYREVHGILLVYDATNPSSFKSLPSWLD 98
>gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aedes aegypti]
gi|108880990|gb|EAT45215.1| AAEL003503-PA [Aedes aegypti]
Length = 208
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKE--VVIDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQA 110
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P +L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQA 110
>gi|119393797|gb|ABL74414.1| Rab7 [Aedes albopictus]
Length = 208
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKE--VVIDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQA 110
>gi|340501463|gb|EGR28249.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 217
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
MK KI+ LG GKT + N D T E PT G+ + C+ + LD ++LWD
Sbjct: 12 MKYKIVFLGDQSVGKTSIINRFIYDNFTGSE-QPTVGIDFI-CK-TIQLDNKTLRLQLWD 68
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F+S+ P++ RD + I V++
Sbjct: 69 TAGQERFKSLIPSYIRDSNAAIIVYD 94
>gi|167394341|ref|XP_001740937.1| GTP-binding protein YPT7 [Entamoeba dispar SAW760]
gi|165894736|gb|EDR22619.1| GTP-binding protein YPT7, putative [Entamoeba dispar SAW760]
Length = 233
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
KIKI +LG + GKT + C + Y T G+ + + +D I++WDT+
Sbjct: 29 KIKIGLLGDMGVGKTCIVQRFCFHKYKDLYESTIGIEM--SDQEVVVDNQSYPIQIWDTA 86
Query: 62 GDHKFESVWPAFQRDVHGIIFVF 84
G +F SV F D+ GI VF
Sbjct: 87 GQERFRSVSRVFFTDIKGIFIVF 109
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQA 110
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQA 110
>gi|328725492|ref|XP_003248501.1| PREDICTED: ras-related protein Rab-8A-like, partial
[Acyrthosiphon pisum]
Length = 174
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L+LG GKT L + CD T + Y T GV +I++ LD ++++WD
Sbjct: 8 KVLVLGDSNVGKTCLMHRFCDETYYDTYISTIGVDYKQKIIQ------LDEKPVKLQIWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ A+ R GI+ V++
Sbjct: 62 TAGQERFRTLTTAYYRGAMGILLVYD 87
>gi|193627284|ref|XP_001944801.1| PREDICTED: ras-related protein Rab-8B-like isoform 1
[Acyrthosiphon pisum]
gi|328715500|ref|XP_003245646.1| PREDICTED: ras-related protein Rab-8B-like isoform 2
[Acyrthosiphon pisum]
Length = 206
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L+LG GKT L + CD T + Y T GV +I++ LD ++++WD
Sbjct: 8 KVLVLGDSNVGKTCLMHRFCDETYYDTYISTIGVDYKQKIIQ------LDEKPVKLQIWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ A+ R GI+ V++
Sbjct: 62 TAGQERFRTLTTAYYRGAMGILLVYD 87
>gi|167383247|ref|XP_001736457.1| GTP-binding protein YPT7 [Entamoeba dispar SAW760]
gi|165901157|gb|EDR27307.1| GTP-binding protein YPT7, putative [Entamoeba dispar SAW760]
Length = 223
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
KIKI +LG + GKT + C + Y T G+ + + +D I++WDT+
Sbjct: 19 KIKIGLLGDMGVGKTCIVQRFCFHKYKDLYESTIGIEM--SDQEVVVDNQSYPIQIWDTA 76
Query: 62 GDHKFESVWPAFQRDVHGIIFVF 84
G +F SV F D+ GI VF
Sbjct: 77 GQERFRSVSRVFFTDIKGIFIVF 99
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 68 QERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQA 111
>gi|242006282|ref|XP_002423981.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212507263|gb|EEB11243.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 229
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG + GKT + N C + Y T GV E +H L T I++WDT+G
Sbjct: 25 KVIILGDVNVGKTSVVNRFCRQSFNFNYKATIGVDF-EIQHFKILKTP-FNIQIWDTAGQ 82
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F + A+ R H ++ VF+
Sbjct: 83 ERFRCIAAAYYRSAHVVVTVFD 104
>gi|167521531|ref|XP_001745104.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776718|gb|EDQ90337.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+LI+G GK+ L A + T E PT GV + S LD +K + LWDT+G
Sbjct: 10 KVLIIGDSNCGKSSLLMAFTEGTFDESIGPTIGVDFKQ--KSLMLDGNKVNLTLWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVP 89
+F ++ ++ R H +I +++ P
Sbjct: 68 ERFRTLTASYYRGAHAVILLYDVSRP 93
>gi|312104294|ref|XP_003150367.1| ADP-ribosylation factor family protein [Loa loa]
gi|307754468|gb|EFO13702.1| ADP-ribosylation factor family protein [Loa loa]
Length = 231
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAE--EYHPTQGVRIVECEHSYALDTSKTEIELWD 59
KI+I ILG AGKT +C L + E + PT G + + + K EI +D
Sbjct: 23 KIRICILGIDGAGKTT---TICALASGEINDILPTNGFTLQQFRYR------KAEIIAYD 73
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV 119
GD + S+W + +V G+I+V + I E ++ +LNN L+I N
Sbjct: 74 LGGDERIRSIWKNYYPEVFGVIYVIDGSEQNRIEESGQLLKDAISDENLNNKPFLVILN- 132
Query: 120 KPGRG 124
K RG
Sbjct: 133 KKDRG 137
>gi|260799919|ref|XP_002594905.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
gi|229280143|gb|EEN50916.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
Length = 205
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDNV 119
+F+S+ AF R + V++ +P L + D F+ Q+ D N +L+ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTMPNTFKSLDSWRDEFLIQASPRDPENFPFVLLGN- 125
Query: 120 KPGRGDSSGHAHSLRR 135
+ D A S +R
Sbjct: 126 ---KVDLDNRAVSTKR 138
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D + +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT--KDVVIDDKEVTVQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + + F+ QS
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQS 110
>gi|290992188|ref|XP_002678716.1| rab family small GTPase [Naegleria gruberi]
gi|284092330|gb|EFC45972.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF++ V + + D F+ Q+ D +N ++I N
Sbjct: 67 QERFQSLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPFVVIAN 125
>gi|56967694|gb|AAW31996.1| CG2885 [Drosophila melanogaster]
Length = 195
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+++LG GK+ L D E+Y T G+ + S L + +++WDTSG
Sbjct: 8 FKVIVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
D +F S+ P+ R HGI+ V++
Sbjct: 66 DKRFNSLMPSNYRSAHGILLVYD 88
>gi|198431173|ref|XP_002122116.1| PREDICTED: similar to RAB34, member RAS oncogene family [Ciona
intestinalis]
Length = 269
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++I+G + GKT L N C ++Y T GV E E L+T T +++WDT+G
Sbjct: 60 KMIIIGDVSVGKTSLVNRFCKKAFDKDYKATIGVDF-EVERFEILNTPFT-LQMWDTAGQ 117
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + A+ R H + VF+
Sbjct: 118 ERFQCIAAAYYRGAHIVSIVFD 139
>gi|289742629|gb|ADD20062.1| GTPase Rab5/YPT51 [Glossina morsitans morsitans]
Length = 262
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG GKT L T E+ PT C+ LD K +++WDT+G
Sbjct: 7 KVVILGSRGVGKTRLVTKYIKSTLQSEFGPTVAPSFFTCK--VLLDDYKVILQIWDTAGQ 64
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F++V P + R+ + I VF+
Sbjct: 65 ERFKAVTPMYYRNANAAILVFD 86
>gi|184186121|ref|NP_001116983.1| rab7 GTPase homolog SUrab7 [Strongylocentrotus purpuratus]
Length = 205
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRFVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTSPNSFKSLDSWRDEFLIQA 110
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++KILI+G GK+ L D T E PT GV L+ + ++ +WDT+
Sbjct: 7 ELKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKN--KMLTLNGQQVKLTVWDTA 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKP 121
G +F+++ ++ R HG+I V++ ++ + + D N K L+ + +
Sbjct: 65 GQDRFKTLTASYYRGAHGVILVYDVTRRATFEHIIPWLNEANVYCDDNVVKMLVANKIDE 124
Query: 122 GRGDSSGHAHSLRR 135
R S+ +L R
Sbjct: 125 PRQVSTDEGRALAR 138
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQA 110
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTS 61
+KI+++G GKT L + + +++Y T G + E LD KT +++WDT+
Sbjct: 7 LKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKE--ITLDGGKTVTLQIWDTA 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 65 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 113
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDNV 119
+F+S+ AF R + VF+ P +L + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNFPFVVLGN- 125
Query: 120 KPGRGDSSGHAHSLRR 135
+ D A S +R
Sbjct: 126 ---KIDLENRAVSAKR 138
>gi|194890059|ref|XP_001977225.1| GG18360 [Drosophila erecta]
gi|190648874|gb|EDV46152.1| GG18360 [Drosophila erecta]
Length = 218
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KIL+LG GK+ L D +Y T GV S + +++LWDT+G
Sbjct: 8 FKILVLGDSGVGKSCLLMRFSDDRFTGKYLCTVGVDFKV--RSVEVAGQPVKLQLWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+ +F+S+ PA+ R HGI+ V+++
Sbjct: 66 EERFKSMLPAYYRGAHGILLVYDT 89
>gi|209155278|gb|ACI33871.1| Ras-related protein Rab-7a [Salmo salar]
Length = 201
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 62 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 119
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 120 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 163
>gi|229367508|gb|ACQ58734.1| Ras-related protein Rab-7a [Anoplopoma fimbria]
Length = 207
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFHRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKE--LLVDDKLVTLQIWDTAG 70
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F S+ AF R + V++ + L ++D F+ Q+D N
Sbjct: 71 QERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGN 118
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKE--LLVDDKLVTLQIWDTAG 70
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F S+ AF R + V++ + L ++D F+ Q+D N
Sbjct: 71 QERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGN 118
>gi|34147513|ref|NP_004628.4| ras-related protein Rab-7a [Homo sapiens]
gi|148747526|ref|NP_033031.2| ras-related protein Rab-7a [Mus musculus]
gi|126336249|ref|XP_001366922.1| PREDICTED: ras-related protein Rab-7a-like [Monodelphis domestica]
gi|296225983|ref|XP_002758722.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Callithrix
jacchus]
gi|296225985|ref|XP_002758723.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Callithrix
jacchus]
gi|301764537|ref|XP_002917684.1| PREDICTED: ras-related protein Rab-7a-like [Ailuropoda melanoleuca]
gi|332261783|ref|XP_003279946.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Nomascus
leucogenys]
gi|332817831|ref|XP_526302.3| PREDICTED: ras-related protein Rab-7a isoform 3 [Pan troglodytes]
gi|395516722|ref|XP_003762536.1| PREDICTED: ras-related protein Rab-7a [Sarcophilus harrisii]
gi|395847153|ref|XP_003796248.1| PREDICTED: ras-related protein Rab-7a [Otolemur garnettii]
gi|397518563|ref|XP_003829454.1| PREDICTED: ras-related protein Rab-7a [Pan paniscus]
gi|403268248|ref|XP_003926190.1| PREDICTED: ras-related protein Rab-7a [Saimiri boliviensis
boliviensis]
gi|410037454|ref|XP_003950229.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Pan troglodytes]
gi|410037456|ref|XP_003950230.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Pan troglodytes]
gi|410951826|ref|XP_003982594.1| PREDICTED: ras-related protein Rab-7a-like [Felis catus]
gi|426342010|ref|XP_004036309.1| PREDICTED: ras-related protein Rab-7a-like [Gorilla gorilla
gorilla]
gi|441665150|ref|XP_004091796.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Nomascus
leucogenys]
gi|1709999|sp|P51149.1|RAB7A_HUMAN RecName: Full=Ras-related protein Rab-7a
gi|46397834|sp|P51150.2|RAB7A_MOUSE RecName: Full=Ras-related protein Rab-7a
gi|20379060|gb|AAM21090.1|AF498942_1 small GTP binding protein RAB7 [Homo sapiens]
gi|1089893|emb|CAA63763.1| RAB7 protein [Homo sapiens]
gi|12836622|dbj|BAB23738.1| unnamed protein product [Mus musculus]
gi|13435456|gb|AAH04597.1| RAB7, member RAS oncogene family [Mus musculus]
gi|33870783|gb|AAH08721.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|56269740|gb|AAH86793.1| RAB7, member RAS oncogene family [Mus musculus]
gi|60688670|gb|AAH13728.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|71060033|emb|CAJ18560.1| Rab7 [Mus musculus]
gi|74143376|dbj|BAE24180.1| unnamed protein product [Mus musculus]
gi|74178374|dbj|BAE32452.1| unnamed protein product [Mus musculus]
gi|74185227|dbj|BAE30093.1| unnamed protein product [Mus musculus]
gi|74186523|dbj|BAE34750.1| unnamed protein product [Mus musculus]
gi|74195255|dbj|BAE28355.1| unnamed protein product [Mus musculus]
gi|74213341|dbj|BAE35490.1| unnamed protein product [Mus musculus]
gi|74220348|dbj|BAE31401.1| unnamed protein product [Mus musculus]
gi|112292967|dbj|BAF02861.1| Rab7 [Mus musculus]
gi|119599708|gb|EAW79302.1| RAB7, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148666823|gb|EDK99239.1| mCG130610 [Mus musculus]
gi|168277952|dbj|BAG10954.1| Ras-related protein Rab-7a [synthetic construct]
gi|355564540|gb|EHH21040.1| hypothetical protein EGK_04016 [Macaca mulatta]
gi|355786382|gb|EHH66565.1| hypothetical protein EGM_03582 [Macaca fascicularis]
gi|380785041|gb|AFE64396.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380785043|gb|AFE64397.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816414|gb|AFE80081.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816416|gb|AFE80082.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410517|gb|AFH28472.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410519|gb|AFH28473.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421483|gb|AFH33955.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421485|gb|AFH33956.1| ras-related protein Rab-7a [Macaca mulatta]
gi|384949354|gb|AFI38282.1| ras-related protein Rab-7a [Macaca mulatta]
gi|410226154|gb|JAA10296.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|410226162|gb|JAA10300.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|417397111|gb|JAA45589.1| Putative ras-related protein rab-7a [Desmodus rotundus]
gi|431913713|gb|ELK15203.1| Ras-related protein Rab-7a [Pteropus alecto]
gi|432103477|gb|ELK30581.1| Ras-related protein Rab-7a [Myotis davidii]
gi|444512838|gb|ELV10180.1| Ras-related protein Rab-7a [Tupaia chinensis]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|194390946|dbj|BAG60591.1| unnamed protein product [Homo sapiens]
Length = 193
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|115465131|ref|NP_001056165.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|113579716|dbj|BAF18079.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|215740455|dbj|BAG97111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632372|gb|EEE64504.1| hypothetical protein OsJ_19355 [Oryza sativa Japonica Group]
Length = 206
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + +++Y T G V E ++ +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKE--VLIEDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ + L ++D F+TQ+ ++ K
Sbjct: 68 QERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPK 117
>gi|1050551|emb|CAA61797.1| rab7 [Mus musculus]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|354482839|ref|XP_003503603.1| PREDICTED: ras-related protein Rab-7a-like [Cricetulus griseus]
gi|344253367|gb|EGW09471.1| Ras-related protein Rab-7a [Cricetulus griseus]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|255582823|ref|XP_002532185.1| protein with unknown function [Ricinus communis]
gi|223528133|gb|EEF30203.1| protein with unknown function [Ricinus communis]
Length = 209
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E L+ +++WDT+G
Sbjct: 13 LKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKE--LQLEEKVVTLQIWDTAG 70
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q+D
Sbjct: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKSFETLNNWHEEFIKQAD 115
>gi|50754381|ref|XP_414359.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Gallus gallus]
gi|326927938|ref|XP_003210144.1| PREDICTED: ras-related protein Rab-7a-like [Meleagris gallopavo]
gi|363738555|ref|XP_003642026.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Gallus gallus]
gi|449276664|gb|EMC85096.1| Ras-related protein Rab-7a [Columba livia]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|78045539|ref|NP_001030253.1| ras-related protein Rab-7a [Bos taurus]
gi|108860919|sp|Q3T0F5.1|RAB7A_BOVIN RecName: Full=Ras-related protein Rab-7a
gi|74354082|gb|AAI02416.1| RAB7A, member RAS oncogene family [Bos taurus]
Length = 207
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|156102685|ref|XP_001617035.1| small GTPase Rab5b [Plasmodium vivax Sal-1]
gi|148805909|gb|EDL47308.1| small GTPase Rab5b, putative [Plasmodium vivax]
Length = 181
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+KI++LG GK+ +A LC +E++ T G + H+ L T ++ +WDT
Sbjct: 32 KVKIVLLGDSGVGKSSIALYLCHGRFSEKHQVTIGAAFLH--HTIELKNGATMKLHIWDT 89
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F S+ P + RD +G + V++S
Sbjct: 90 GGQERFRSMAPLYYRDAYGAVVVYDS 115
>gi|284794146|pdb|3LAW|A Chain A, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794147|pdb|3LAW|B Chain B, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794148|pdb|3LAW|C Chain C, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794149|pdb|3LAW|D Chain D, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794150|pdb|3LAW|E Chain E, Structure Of Gtp-Bound L129f Mutant Rab7
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|218197170|gb|EEC79597.1| hypothetical protein OsI_20781 [Oryza sativa Indica Group]
Length = 206
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + +++Y T G V E ++ +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKE--VLIEDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ + L ++D F+TQ+ ++ K
Sbjct: 68 QERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPK 117
>gi|327265951|ref|XP_003217771.1| PREDICTED: ras-related protein Rab-7a-like [Anolis carolinensis]
gi|387017942|gb|AFJ51089.1| ras-related protein Rab-7a-like [Crotalus adamanteus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|50979156|ref|NP_001003316.1| ras-related protein Rab-7a [Canis lupus familiaris]
gi|131797|sp|P18067.1|RAB7A_CANFA RecName: Full=Ras-related protein Rab-7a
gi|164058|gb|AAA30890.1| GTP-binding protein (rab7) [Canis lupus familiaris]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + +Y T G + E +D ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKE--LTIDDKSVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ + L+ D F+ Q+++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKN 114
>gi|402471255|gb|EJW05102.1| small GTP-binding protein domain protein [Edhazardia aedis USNM
41457]
Length = 294
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L + + YHPT G+ + ++ +++LWDT+
Sbjct: 4 KYKIVFLGDAAVGKTTLLSQYAYKQAEKNYHPTIGIDFLT--QQLKINNEIVKLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P + RD + V++
Sbjct: 62 GQERFNSIIPNYTRDCFMAVIVYD 85
>gi|348551446|ref|XP_003461541.1| PREDICTED: ras-related protein Rab-7a-like [Cavia porcellus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|297263161|ref|XP_001095709.2| PREDICTED: ras-related protein Rab-7a [Macaca mulatta]
Length = 208
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 68 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 111
>gi|187607630|ref|NP_001119836.1| ras-related protein Rab-7a [Ovis aries]
gi|184191121|gb|ACC76773.1| RAS oncogene family-like 7A [Ovis aries]
gi|385281368|gb|AFI57836.1| ras-related protein Rab-7A [Capra hircus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|156392743|ref|XP_001636207.1| predicted protein [Nematostella vectensis]
gi|156223308|gb|EDO44144.1| predicted protein [Nematostella vectensis]
Length = 221
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K ++LG + GKT L N C +Y T GV E E LD + +++WDT+G
Sbjct: 35 KAIVLGDVAVGKTSLINRFCRNAFDHDYKATIGVDF-EVERFKILD-QEFNMQIWDTAGQ 92
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + A+ R H II VF+
Sbjct: 93 ERFKCMAAAYYRAAHVIILVFD 114
>gi|378755808|gb|EHY65834.1| hypothetical protein NERG_01441 [Nematocida sp. 1 ERTm2]
Length = 214
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++KI+ILGP AGKT L A + A+ PT G +I++ E ++ +K +E+ D
Sbjct: 16 RLKIVILGPDNAGKTSLLQAYLNQNIAD-IEPTYGYQIIKTERE--IEETKYHLEILDIG 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNS 86
G + W + V G++FV+++
Sbjct: 73 GQKSIRAYWDTYYSGVDGVLFVYDT 97
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella vectensis]
gi|156224507|gb|EDO45332.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQA 110
>gi|13027392|ref|NP_076440.1| ras-related protein Rab-7a [Rattus norvegicus]
gi|1710001|sp|P09527.2|RAB7A_RAT RecName: Full=Ras-related protein Rab-7a; AltName: Full=Ras-related
protein BRL-RAS; AltName: Full=Ras-related protein p23
gi|51247924|pdb|1VG0|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With Monoprenylated Rab7 Protein
gi|51247926|pdb|1VG8|A Chain A, Gppnhp-Bound Rab7
gi|51247927|pdb|1VG8|B Chain B, Gppnhp-Bound Rab7
gi|51247928|pdb|1VG8|C Chain C, Gppnhp-Bound Rab7
gi|51247929|pdb|1VG8|D Chain D, Gppnhp-Bound Rab7
gi|9837359|gb|AAG00543.1|AF286535_1 GTP-binding protein RAB7 [Rattus norvegicus]
gi|505565|emb|CAA31053.1| unnamed protein product [Rattus rattus]
gi|47938948|gb|AAH72470.1| RAB7A, member RAS oncogene family [Rattus norvegicus]
gi|71891601|dbj|BAE16999.1| RAB7 [Rattus norvegicus]
gi|71891603|dbj|BAE17000.1| RAB7 [Rattus norvegicus]
gi|149036684|gb|EDL91302.1| RAB7, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|224066111|ref|XP_002198172.1| PREDICTED: ras-related protein Rab-7a [Taeniopygia guttata]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|432857138|ref|XP_004068548.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D + +++WDT+G
Sbjct: 231 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT--KDVVIDDKEVTVQIWDTAG 288
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + + F+ QS
Sbjct: 289 QERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQS 332
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D + +++WDT+G
Sbjct: 231 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLT--KDVVIDDKEVTVQIWDTAG 288
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + + F+ QS
Sbjct: 289 QERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQS 332
>gi|3023913|sp|P91580.1|RAB33_CIOIN RecName: Full=Putative Ras-related protein Rab-33
gi|1764012|emb|CAB06046.1| COS41.2 [Ciona intestinalis]
Length = 218
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+++G GKT L C E+ T GV E + +D + +++LWDT+G
Sbjct: 16 FKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRE--RTLDIDGEQIKLQLWDTAG 73
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFN-------SGVPGHISE 94
+F +S+ P + R+VH ++F ++ G+P I E
Sbjct: 74 QERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPSWIEE 113
>gi|198426425|ref|XP_002125159.1| PREDICTED: similar to COS41.2 [Ciona intestinalis]
Length = 218
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+++G GKT L C E+ T GV E + +D + +++LWDT+G
Sbjct: 16 FKIIVIGDSDVGKTCLTYRFCTGKFPEKTEATIGVDFRE--RTLDIDGEQIKLQLWDTAG 73
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFN-------SGVPGHISE 94
+F +S+ P + R+VH ++F ++ G+P I E
Sbjct: 74 QERFRKSMVPHYYRNVHAVVFTYDVTKGRSFQGLPSWIEE 113
>gi|387592638|gb|EIJ87662.1| hypothetical protein NEQG_02209 [Nematocida parisii ERTm3]
gi|387595266|gb|EIJ92891.1| hypothetical protein NEPG_02290 [Nematocida parisii ERTm1]
Length = 246
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T ++YHPT GV + A T ++LWDT+
Sbjct: 56 KYKIVFLGDTAVGKTTLITKYVFSTETKDYHPTIGVDFFAQKTEIAGKT--VNLQLWDTA 113
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P + RD + +F+
Sbjct: 114 GQERFRSLIPNYTRDSFMAVIMFD 137
>gi|299116473|emb|CBN76190.1| Rab7, RAB family GTPase [Ectocarpus siliculosus]
Length = 213
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N + + +Y T G + +D +++WDT+G
Sbjct: 9 LKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLT--KDTVIDDKLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + V++ P +L + + F+ Q+ D +N +LI N
Sbjct: 67 QERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQAAPMDPDNFPFVLIGN 125
>gi|167527390|ref|XP_001748027.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773445|gb|EDQ87084.1| predicted protein [Monosiga brevicollis MX1]
Length = 200
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
+K+ +G GK+ + + E + PT GV R VE + + +I++W
Sbjct: 11 VKLCAVGDSQVGKSSIIQRFANGIFPEFHGPTIGVDFFFRTVE------MKGKQVKIQVW 64
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
DT+G +F+S+ ++ R HGIIFV++ L +Y+ V +S ++ KC+++ N
Sbjct: 65 DTAGQERFQSITQSYYRGAHGIIFVYDLTDVVSAQSLSRWYED-VKKSARSDIKCIVVGN 123
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|124512956|ref|XP_001349834.1| Rab5b, GTPase [Plasmodium falciparum 3D7]
gi|17932874|emb|CAD19466.1| Rab5b protein [Plasmodium falciparum 3D7]
gi|23615251|emb|CAD52241.1| Rab5b, GTPase [Plasmodium falciparum 3D7]
Length = 207
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+KI++LG GK+ +A LC +E++ T G + H+ L T ++ +WDT
Sbjct: 34 KVKIVLLGDSGVGKSSIALYLCHGRFSEKHQVTIGAAFLH--HNIELKNGATMKLHIWDT 91
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F S+ P + RD +G + V++S
Sbjct: 92 GGQERFRSMAPLYYRDAYGAVVVYDS 117
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIEL--WDT 60
+KILI+G GK+ L T + + P Q + I + L+ ++L WDT
Sbjct: 9 LKILIIGESGVGKSSLLLRF----TEDNFDPEQTLTIGVDFKTKKLNVEGNTVKLAIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+G +F ++ P++ RD G I VF+ G ++L + + T S NN ++I N
Sbjct: 65 AGQERFRTLTPSYYRDAQGAILVFDVGSQATFAKLETWLNELETYSTKNNIVKMIIGN 122
>gi|72392985|ref|XP_847293.1| small GTP-binding protein Rab7 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|1877404|emb|CAA68210.1| rab7 [Trypanosoma brucei]
gi|62176473|gb|AAX70580.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei]
gi|70803323|gb|AAZ13227.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261330517|emb|CBH13501.1| small GTP-binding protein Rab7, putative [Trypanosoma brucei
gambiense DAL972]
Length = 219
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEI--ELWDTS 61
KI+++G + GK+ +++ CD ++ PT GV C H+ L+ I ++WDTS
Sbjct: 8 KIIVIGDVGVGKSNISSRFCDSIYYDDIVPTIGVDFKYC-HTTTLEKHARTILLQIWDTS 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R+ HG + F+
Sbjct: 67 GQDRFVSLTTAYYRNCHGALICFD 90
>gi|145488520|ref|XP_001430264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833736|emb|CAI39339.1| rab_B32 [Paramecium tetraurelia]
gi|124397360|emb|CAK62866.1| unnamed protein product [Paramecium tetraurelia]
Length = 216
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ +G GKT + E++ PT G+ + +D ++LWDT+
Sbjct: 13 KFKIVFIGNQAVGKTSIIARFVYEQIPEQHQPTIGIDFLS--KCIQVDNKTVRLQLWDTA 70
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDY 101
G +F S+ P++ RD H + ++ +++ + DY
Sbjct: 71 GQERFRSLIPSYIRDSHAAVLCYDVSNAQSFADIKAWLDY 110
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQA 110
>gi|198423784|ref|XP_002128753.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ +P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWRDEFLIQA 110
>gi|156548168|ref|XP_001606889.1| PREDICTED: ADP-ribosylation factor-like protein 13B-like [Nasonia
vitripennis]
Length = 364
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 7/118 (5%)
Query: 3 IKILILGPIMAGKTVLANALCD--LTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
I +L++G AGK+ + N + + L T E PT G R V ++ SK I L+D
Sbjct: 30 IVLLVVGLDNAGKSSVVNYIFNKSLLTQESVVPTIGFRTVSFDYK-----SKYSIRLYDV 84
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
G + ++WP + DVHG+IFV + ++E + V ++ L++ N
Sbjct: 85 GGGPQIRALWPKYYADVHGVIFVVDCNDHRRLAENTAVFQDLVCHDLISQKPVLVLGN 142
>gi|123390419|ref|XP_001299882.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121880822|gb|EAX86952.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 192
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +KI ++G M GKT L C T +E+Y T GV+ + E + + I +WD
Sbjct: 6 ITVKIALIGSSMVGKTTLMVKYCKGTFSEDYIATLGVQFL--ERQITVKNTPVNIVIWDI 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLN-NHKCLLIDN 118
G F + P H +IF+F+ +I+ L D++ + D N + + L+ N
Sbjct: 64 GGQKSFMDMLPVCCDGAHVLIFMFDL---SNITSLTALRDWYKSAYDCNPSARVFLVGN 119
>gi|196010982|ref|XP_002115355.1| hypothetical protein TRIADDRAFT_59188 [Trichoplax adhaerens]
gi|190582126|gb|EDV22200.1| hypothetical protein TRIADDRAFT_59188 [Trichoplax adhaerens]
Length = 233
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT + N C ++Y T GV E E + + S ++++WDT+G
Sbjct: 48 KVIVIGDVSVGKTSIINKYCRRVFDKDYKATIGVDF-EVE-DFVIKGSNFQLQIWDTAGQ 105
Query: 64 HKFESVWPAFQRDVHGIIFVF 84
+F+SV A+ R + +I F
Sbjct: 106 ERFQSVARAYFRSSNAVIIAF 126
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTS 61
+K++ILG GKT L + + +Y T G + E +D +K+ +++WDT+
Sbjct: 10 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKE--ITIDNNKSVTLQIWDTA 67
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 68 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 116
>gi|47218980|emb|CAG02018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|260820642|ref|XP_002605643.1| hypothetical protein BRAFLDRAFT_149126 [Branchiostoma floridae]
gi|229290978|gb|EEN61653.1| hypothetical protein BRAFLDRAFT_149126 [Branchiostoma floridae]
Length = 180
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K +++G + GKT L N C T +Y T GV E E L+T +++WDT+G
Sbjct: 6 KAIVIGDVAVGKTCLVNRFCKDTFDRDYKATIGVDF-EVERFDILNTP-FNLQVWDTAGQ 63
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + A+ R H II F+
Sbjct: 64 ERFQCIAAAYYRGAHVIIVTFD 85
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQA 110
>gi|333466057|gb|AEF33797.1| Rab7 [Fenneropenaeus chinensis]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 41 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 98
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 99 QERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQA 142
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQA 110
>gi|195502409|ref|XP_002098211.1| GE24075 [Drosophila yakuba]
gi|194184312|gb|EDW97923.1| GE24075 [Drosophila yakuba]
Length = 186
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDH 64
+LILG AGK+ L +L ++ + P + ++L + + ++LWD +G+
Sbjct: 23 LLILGLDNAGKSTLTASLAEIFNGDSKEPGKQA------SEWSLTINNSRVQLWDINGEL 76
Query: 65 KFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
K WP + + V +IFV +S +SE + +L+ L++ N K G
Sbjct: 77 KNRQSWPNYYKKVKVLIFVLDSTDALRLSEARCVLCDVLMHQELDKAPLLIVSNKKDASG 136
Query: 125 DSS 127
S
Sbjct: 137 SLS 139
>gi|56118666|ref|NP_001008109.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|51703747|gb|AAH81311.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269955|emb|CAJ81785.1| RAB33B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 226
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C E T GV E + +D + +I+LWDT+G
Sbjct: 34 KIIVIGDSNVGKTCLTYRFCTCCFPERTEATIGVDFRE--RTVDIDGERIKIQLWDTAGQ 91
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 92 ERFRKSMVQHYYRNVHAVVFVYD 114
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRIVTMQIWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 69 QERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQA 112
>gi|213407064|ref|XP_002174303.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
gi|212002350|gb|EEB08010.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +++Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGESGVGKTSLMNQFVNRKFSKDYKATIGADFLTKE--VVVDDKIVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ L + D F+ Q+ NN
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSYESLDSWRDEFLIQASPNN 114
>gi|149053507|gb|EDM05324.1| rCG33118, isoform CRA_b [Rattus norvegicus]
Length = 172
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+ILG GKT L N + ++Y T G + E +D +++WDT+G
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKE--VMIDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ 105
+F+S+ AF R + V++ P L + D F+ Q
Sbjct: 67 QERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQ 109
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+ILG GKT L N + ++Y T G + E +D +++WDT+G
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKE--VMIDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ 105
+F+S+ AF R + V++ P L + D F+ Q
Sbjct: 67 QERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQ 109
>gi|22760296|dbj|BAC11141.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|449673505|ref|XP_004207973.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 386
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEI--ELWDT 60
KI+++G GK+ L N C E PT GV C+ + SK I ELWDT
Sbjct: 189 FKIVVVGDSGVGKSSLLNCFCSRPFDENLGPTIGV----CDINIESGASKKHIKLELWDT 244
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G+ +F + F R+ H + VF+
Sbjct: 245 AGEERFRGITSVFYRNAHAALIVFD 269
>gi|307204727|gb|EFN83308.1| Ras-related protein Rab-7a [Harpegnathos saltator]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQA 110
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + +Y T G + E + + S T +++WDT+G
Sbjct: 11 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVT-LQIWDTAG 69
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 70 QERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 117
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|291388446|ref|XP_002710790.1| PREDICTED: RAB7A, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFRNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLCVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+ILG GKT L N + ++Y T G + E +D +++WDT+G
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKE--VMIDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ 105
+F+S+ AF R + V++ P L + D F+ Q
Sbjct: 67 QERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQ 109
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + +Y T G + E + + S T +++WDT+G
Sbjct: 11 LKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSVT-LQIWDTAG 69
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 70 QERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 117
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L N + + Y T G + E +D K +++WDT+
Sbjct: 8 LKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKE--VMIDDDKLVTLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
G +F+S+ AF R I V++ P L + + F+ Q+ D+ N +++ N
Sbjct: 66 GQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIVLGN 125
Query: 119 VKPGRGD---SSGHAHS 132
D S AHS
Sbjct: 126 KVDRENDRRVSKAKAHS 142
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDSKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|449664228|ref|XP_002169364.2| PREDICTED: uncharacterized protein LOC100206038 [Hydra
magnipapillata]
Length = 446
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYA---LDTSKTEIELWD 59
+K+L LG GKT + T E++ PT G+ + E +Y + K +E+WD
Sbjct: 17 LKLLTLGDSGVGKTSFVLQFIEGTFTEKFVPTIGMDLREKLMTYQDHFKEERKVYLEIWD 76
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ AF RD G + +F+
Sbjct: 77 TAGQERFRSLTTAFFRDAMGFLLIFD 102
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRIVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQA 110
>gi|195481939|ref|XP_002101841.1| GE17848 [Drosophila yakuba]
gi|194189365|gb|EDX02949.1| GE17848 [Drosophila yakuba]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KIL+LG GK+ L D +Y T GV S + ++++WDT+G
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTGKYLCTVGVDFKV--RSVEVAGQVVKLQVWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+ +F+S+ PA+ R HGI+ V+++
Sbjct: 66 EERFKSLLPAYYRGAHGILLVYDT 89
>gi|343428228|emb|CBQ71758.1| related to ARL1-ADP-ribosylation factor [Sporisorium reilianum
SRZ2]
Length = 191
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
++I ++G AGKT L N L A+E PT G + + + T I++WD G
Sbjct: 25 LEICVVGLQAAGKTSLVNLLSSGQFADEMVPTVGFNMRKVR------SGNTTIKVWDIGG 78
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+F S+W + R V I+FV +S
Sbjct: 79 QPRFRSMWERYCRGVSAIVFVVDS 102
>gi|123469823|ref|XP_001318121.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121900872|gb|EAY05898.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 183
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEI-----EL 57
++ILILG AGKT + YH G + + + + A + K E+ ++
Sbjct: 18 VRILILGLDAAGKTTIL-----------YHLKLGNYVQQVQPTVAFNLEKVEVGNLKLQI 66
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFNSG 87
WD G H+ W + RD HGI+FV +S
Sbjct: 67 WDLGGQHQLRPFWRLYYRDSHGIVFVIDSA 96
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+ILG GKT L N + ++Y T G + E +D +++WDT+G
Sbjct: 9 FKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKE--VMIDDRMVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ 105
+F+S+ AF R + V++ P L + D F+ Q
Sbjct: 67 QERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQ 109
>gi|240986|gb|AAB20669.1| LMW G-protein [Mus sp.]
gi|228517|prf||1805246A low molecular weight GTP-binding protein
Length = 208
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 3 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 60
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 61 ERFKCIASTYYRGAQAIIIVFN 82
>gi|338711068|ref|XP_001504213.2| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-34-like
[Equus caballus]
Length = 316
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|313213136|emb|CBY36994.1| unnamed protein product [Oikopleura dioica]
gi|313234411|emb|CBY24610.1| unnamed protein product [Oikopleura dioica]
Length = 240
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
+ +I+++G GK+ L + + AE PT GV R++E E S D S+ +++
Sbjct: 23 QFRIILVGDSTVGKSALLKRFTEGSFAETSDPTVGVDFFARVIEIEDSVP-DFSRCRLQI 81
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFN 85
WDT+G +F S+ ++ R+ G + V++
Sbjct: 82 WDTAGQERFRSIARSYYRNAVGALIVYD 109
>gi|58865850|ref|NP_001012140.1| ras-related protein Rab-34 [Rattus norvegicus]
gi|81883442|sp|Q5U1Y1.1|RAB34_RAT RecName: Full=Ras-related protein Rab-34
gi|55562768|gb|AAH86400.1| RAB34, member RAS oncogene family [Rattus norvegicus]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|354503613|ref|XP_003513875.1| PREDICTED: ras-related protein Rab-34-like isoform 1 [Cricetulus
griseus]
gi|354503615|ref|XP_003513876.1| PREDICTED: ras-related protein Rab-34-like isoform 2 [Cricetulus
griseus]
gi|344258445|gb|EGW14549.1| Ras-related protein Rab-34 [Cricetulus griseus]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|410980327|ref|XP_003996529.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Felis catus]
gi|410980329|ref|XP_003996530.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Felis catus]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ V L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQA 110
>gi|426237210|ref|XP_004012554.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-34 [Ovis
aries]
Length = 319
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 114 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 171
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 172 ERFKCIASTYYRGAQAIIIVFN 193
>gi|351710399|gb|EHB13318.1| Ras-related protein Rab-34 [Heterocephalus glaber]
Length = 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 90 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 147
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 148 ERFKCIASTYYRGAQAIIIVFN 169
>gi|332026892|gb|EGI66993.1| ADP-ribosylation factor-like protein 13B [Acromyrmex echinatior]
Length = 360
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 15/120 (12%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYH---PTQGVRIVECEH-SYALDTSKTEIELW 58
I +LI+G +GK+ + N + + + H PT G R+V +H SY+ ++++
Sbjct: 22 IVLLIMGLDNSGKSTILNHI----SGDPDHNVLPTMGFRMVSLKHKSYS-------VKIY 70
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D G + ++WP + D+HG+I+V ++ ++E + ++ +T ++ LL+ N
Sbjct: 71 DLGGSSQIRALWPKYYNDIHGLIYVVDASDISRLAENKVVFNELITHEHISTKPILLLAN 130
>gi|297272228|ref|XP_002800389.1| PREDICTED: ras-related protein Rab-34-like isoform 2 [Macaca
mulatta]
gi|297272230|ref|XP_001109102.2| PREDICTED: ras-related protein Rab-34-like isoform 1 [Macaca
mulatta]
gi|90085571|dbj|BAE91526.1| unnamed protein product [Macaca fascicularis]
Length = 260
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 55 KIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 112
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 113 ERFKCIASTYYRGAQAIIVVFN 134
>gi|178056534|ref|NP_001116650.1| ras-related protein Rab-34 [Sus scrofa]
gi|118573264|sp|Q06AU4.1|RAB34_PIG RecName: Full=Ras-related protein Rab-34
gi|115394764|gb|ABI97176.1| RAB34 [Sus scrofa]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|395849134|ref|XP_003797190.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Otolemur
garnettii]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|57524756|ref|NP_001005591.1| uncharacterized protein LOC449549 [Danio rerio]
gi|51895902|gb|AAH82296.1| Zgc:100918 [Danio rerio]
Length = 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|378754716|gb|EHY64745.1| hypothetical protein NERG_02148 [Nematocida sp. 1 ERTm2]
Length = 202
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T ++YHPT GV + T ++LWDT+
Sbjct: 11 KYKIVFLGDTAVGKTTLITKYVFSTETKDYHPTIGVDFFAQKTEIGGKT--VNLQLWDTA 68
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P + RD + +F+
Sbjct: 69 GQERFRSLIPNYTRDSFMAVIMFD 92
>gi|410927328|ref|XP_003977101.1| PREDICTED: ras-related protein Rab-33B-like [Takifugu rubripes]
Length = 241
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
KI+++G GKT L C E+ T GV R+VE +D K +I+LW
Sbjct: 27 FKIIVIGDSGVGKTCLTYRFCAGKFPEKTEATIGVDFRERLVE------IDGEKIKIQLW 80
Query: 59 DTSGDHKF-ESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNN 110
DT+G +F +S+ + R+VH ++FV++ +P I E L
Sbjct: 81 DTAGQERFRKSMVQHYYRNVHAVVFVYDITNAASFRNLPAWIEECRQHALGNEVPRILVG 140
Query: 111 HKCLLIDNVKPG 122
+KC L D+V+ G
Sbjct: 141 NKCDLQDSVQVG 152
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|402899135|ref|XP_003912559.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Papio anubis]
gi|402899137|ref|XP_003912560.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Papio anubis]
gi|355568361|gb|EHH24642.1| hypothetical protein EGK_08335 [Macaca mulatta]
gi|355753865|gb|EHH57830.1| hypothetical protein EGM_07557 [Macaca fascicularis]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIVVFN 133
>gi|31560774|ref|NP_258436.2| ras-related protein Rab-34 [Mus musculus]
gi|226958650|ref|NP_001152954.1| ras-related protein Rab-34 [Mus musculus]
gi|23491737|dbj|BAC16803.1| Rab family small GTPase Rah [Mus musculus]
gi|24047252|gb|AAH38638.1| RAB34, member of RAS oncogene family [Mus musculus]
gi|112293029|dbj|BAF02892.1| Rab34 [Mus musculus]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|402899141|ref|XP_003912562.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Papio anubis]
Length = 274
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 77 KIIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 134
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 135 ERFKCIASTYYRGAQAIIVVFN 156
>gi|340367925|ref|XP_003382503.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 201
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ KILI+G GK+ LC T +Y T GV + +D ++ WDT
Sbjct: 7 ITFKILIVGNPHVGKSCFLTRLCTNTFTTKYASTIGVDFYS--RALVIDDKTVALQFWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+SV A+ R G+I +++
Sbjct: 65 AGQERFQSVTKAYYRGADGVILMYD 89
>gi|111226872|ref|XP_001134601.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|90970812|gb|EAS66917.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 212
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K +++GP +GKT L L T ++E PT G + ++ T ++E+WDT+G
Sbjct: 22 VKCVLIGPTFSGKTSLVVRLVRETFSKESQPTVGAMFLN--KTFQFSTHFIKLEVWDTAG 79
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
KF S+ P + + I VF+
Sbjct: 80 QEKFNSLAPMYFKKSKVAIIVFD 102
>gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens]
Length = 207
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLIKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE LD ++++WD
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LDGKVIKLQIWD 65
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII VF+
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVFD 91
>gi|218511591|gb|ACK77787.1| RAB7 [Cyprinus carpio]
Length = 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|296476829|tpg|DAA18944.1| TPA: Ras-related protein RAB34 [Bos taurus]
Length = 209
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|20141805|sp|Q64008.2|RAB34_MOUSE RecName: Full=Ras-related protein Rab-34; AltName: Full=Ras-related
homolog; AltName: Full=Ras-related protein Rab-39;
AltName: Full=Ras-related protein Rah
gi|12958667|gb|AAK09398.1|AF322068_1 RAB39 [Mus musculus]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|340502549|gb|EGR29228.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
+K KI+ LG GKT + N D T E PT G+ + C+ + LD ++LWD
Sbjct: 11 IKYKIVFLGDQSVGKTSIINRFIYDNFTGSE-QPTVGIDFI-CK-TLTLDNKTLRLQLWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F+S+ P++ RD + I V++
Sbjct: 68 TAGQERFKSLIPSYIRDSNAAIIVYD 93
>gi|281350543|gb|EFB26127.1| hypothetical protein PANDA_000110 [Ailuropoda melanoleuca]
Length = 259
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|357128479|ref|XP_003565900.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 207
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G + E +D +++WDT
Sbjct: 7 MLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKE--VQIDDRLFTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V +L + + F+ Q SD N +L+
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPFVLLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|307182205|gb|EFN69539.1| ADP-ribosylation factor-like protein 13B [Camponotus floridanus]
Length = 356
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEH-SYALDTSKTEIELWDTS 61
I +LI+G AGK+++ N + PT G R V +H SY+ ++++D
Sbjct: 22 IILLIVGLDNAGKSLILNHISG-DPDRNVLPTMGFRTVSLKHNSYS-------VKIYDLG 73
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
G + ++WP + D+HG+I+V ++ ++E + ++ +T ++ LL+ N
Sbjct: 74 GSSQIRALWPKYYNDIHGLIYVVDASDISRLAENKVVFNELITHEHISTKPLLLLAN 130
>gi|12963387|gb|AAK11241.1|AF327929_1 small GTPase Rah [Mus musculus]
Length = 259
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|123402494|ref|XP_001302063.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|123499207|ref|XP_001327567.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736306|gb|AAX97482.1| small Rab GTPase RabX4 [Trichomonas vaginalis]
gi|121883314|gb|EAX89133.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
gi|121910498|gb|EAY15344.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 201
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++KI +LG GKT + N + T + Y T G + E ++ + +K + +WDTS
Sbjct: 11 QLKITVLGEYFVGKTSVINRFVEGTFDDSYSATLGFSFLSKELTH--NNTKYILNIWDTS 68
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLN 109
G ++ SV P + R G I V++ + L +Y F + + N
Sbjct: 69 GSERYRSVAPNYYRGSDGCILVYDLTNHKSLESLEFWYGEFKSLAQKN 116
>gi|358344498|ref|XP_003636326.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502261|gb|AES83464.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ V L +++ F+ Q++ +N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSN 114
>gi|355714902|gb|AES05155.1| RAB34, member RAS oncoprotein family [Mustela putorius furo]
Length = 271
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 67 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 124
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 125 ERFKCIASTYYRGAQAIIIVFN 146
>gi|410926735|ref|XP_003976829.1| PREDICTED: ras-related protein Rab-33B-like, partial [Takifugu
rubripes]
Length = 178
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K++++G GKT L + LC T GV E +D K +++LWDT+G
Sbjct: 25 FKVVVIGDSGVGKTCLTHRLCAGEFPPRVEATIGVDFRE--RLLDVDGEKIKLQLWDTAG 82
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+F +S+ + R+VH ++FV++ P S L
Sbjct: 83 QERFRKSMVQHYYRNVHAVLFVYDVTCPASFSSL 116
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + E S +D +K +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIS--IDNNKQVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLSSWKDEFLVQSNVSN 115
>gi|209155660|gb|ACI34062.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|56417345|gb|AAV90623.1| Rab7 [Cenchrus americanus]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G + E +D +++WDT
Sbjct: 7 MLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VQIDDRLFTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V +L + + F+ Q SD N +L+
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLLQASPSDPENFPFVLLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T ++Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|156554968|ref|XP_001602379.1| PREDICTED: ras-related protein Rab-23-like [Nasonia vitripennis]
Length = 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLERE--IEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + F++
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAFSA 91
>gi|123495829|ref|XP_001326833.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121909753|gb|EAY14610.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 20/124 (16%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
+KIL++G GK+ L D + + T GV ++++ +D +K ++++W
Sbjct: 9 LKILVIGESAVGKSALLLRYIDNVFTQTFMTTIGVDFKNKVID------IDGNKVKLQIW 62
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKC----L 114
DT+G KF ++ A+ R HGI+ VF+ IS + F+ + N C L
Sbjct: 63 DTAGQEKFRAITKAYYRGAHGILVVFD------ISNVESFHRTSAWLDSIKNENCDIEVL 116
Query: 115 LIDN 118
LI N
Sbjct: 117 LIGN 120
>gi|323448828|gb|EGB04722.1| hypothetical protein AURANDRAFT_38887 [Aureococcus
anophagefferens]
Length = 199
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALD-----TSKTEI 55
M+IK +++G AGKT L+ C + PT G ++ + Y D T +
Sbjct: 1 MEIKTVVVGDTDAGKTSLSERFCYGDSPMSASPTIGASFLQ-KRVYVQDEHGGGTHNVAL 59
Query: 56 ELWDTSGDHKFESVWPAFQRDVHGIIFVFNS 86
+LWDT+G +F S+ P + R I VF+S
Sbjct: 60 QLWDTAGQERFRSMAPMYYRGATAAIIVFDS 90
>gi|209150114|gb|ACI33008.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|403279895|ref|XP_003931478.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403279897|ref|XP_003931479.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|217071676|gb|ACJ84198.1| unknown [Medicago truncatula]
Length = 221
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ V L +++ F+ Q++ +N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSN 114
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G+ +F ++ ++ R HGII V++
Sbjct: 67 TAGEERFRTITSSYYRGAHGIIVVYD 92
>gi|403279901|ref|XP_003931481.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Saimiri
boliviensis boliviensis]
Length = 308
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|123407029|ref|XP_001302917.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736262|gb|AAX97460.1| small Rab GTPase RabA4 [Trichomonas vaginalis]
gi|121884251|gb|EAX89987.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 196
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K +I+G GKT + L + + EE T GV +D K ++++WDT+G
Sbjct: 8 KFIIVGASGVGKTAILKRLVEDSFTEESQSTIGVEFDS--TMLTIDGRKVKLQIWDTAGQ 65
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F S+ A+ R+ G+I VF+
Sbjct: 66 ERFRSISKAYYRNAVGVILVFD 87
>gi|441661188|ref|XP_004091484.1| PREDICTED: ras-related protein Rab-34 [Nomascus leucogenys]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|222144311|ref|NP_114140.4| ras-related protein Rab-34 isoform 1 [Homo sapiens]
gi|372266171|ref|NP_001243206.1| ras-related protein Rab-34 isoform 1 [Homo sapiens]
gi|297700370|ref|XP_002827220.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pongo abelii]
gi|332848217|ref|XP_003315606.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pan troglodytes]
gi|397483076|ref|XP_003812731.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pan paniscus]
gi|426348891|ref|XP_004042055.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Gorilla gorilla
gorilla]
gi|20139693|sp|Q9BZG1.1|RAB34_HUMAN RecName: Full=Ras-related protein Rab-34; AltName: Full=Ras-related
protein Rab-39; AltName: Full=Ras-related protein Rah
gi|12958665|gb|AAK09397.1|AF322067_1 RAB39 [Homo sapiens]
gi|14041910|dbj|BAB55034.1| unnamed protein product [Homo sapiens]
gi|18073358|emb|CAC81760.1| GTP-binding protein rah [Homo sapiens]
gi|60551670|gb|AAH91510.1| RAB34, member RAS oncogene family [Homo sapiens]
gi|119571513|gb|EAW51128.1| RAB34, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119571515|gb|EAW51130.1| RAB34, member RAS oncogene family, isoform CRA_b [Homo sapiens]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|372266173|ref|NP_001243207.1| ras-related protein Rab-34 isoform 7 [Homo sapiens]
gi|397483080|ref|XP_003812733.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pan paniscus]
gi|410051655|ref|XP_003953136.1| PREDICTED: ras-related protein Rab-34 [Pan troglodytes]
gi|426348895|ref|XP_004042057.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Gorilla gorilla
gorilla]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|223649382|gb|ACN11449.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|388852773|emb|CCF53691.1| related to ARL1-ADP-ribosylation factor [Ustilago hordei]
Length = 191
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
++I ++G AGKT L N L A+E PT G + + + T I++WD G
Sbjct: 25 LEICVVGLQAAGKTSLVNLLSSGQFADEMVPTVGFNM------RKVRSGNTTIKVWDIGG 78
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+F S+W + R V I+FV +S
Sbjct: 79 QPRFRSMWERYCRGVSAIVFVVDS 102
>gi|44890418|gb|AAH66904.1| RAB34 protein [Homo sapiens]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|440800689|gb|ELR21724.1| RAB1B, member RAS oncogene family [Acanthamoeba castellanii str.
Neff]
Length = 198
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
KIL+LG GK+ L D + Y T GV R V+ +D +++LW
Sbjct: 32 FKILLLGSQGVGKSSLLGRFADNEFMDTYRTTVGVDFKIRTVD------IDDKVVKLQLW 85
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
DT+G +F++V + R HG+I V++ P S++
Sbjct: 86 DTAGQERFKTVTNTYFRGAHGVIVVYDITDPKSFSQI 122
>gi|399932055|gb|AFP57563.1| Ras-related protein Rab-7a [Latrodectus hesperus]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNMYVNKRFSNQYKATIGADFLTRE--VQVNDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ P L ++D F+ QS N
Sbjct: 67 QERFQSLGHAFFRGADCCVLVYDVTSPTSFKSLDNWFDEFMVQSGPRN 114
>gi|332256132|ref|XP_003277171.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Nomascus
leucogenys]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|395536178|ref|XP_003770097.1| PREDICTED: ras-related protein Rab-34 [Sarcophilus harrisii]
Length = 372
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 167 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 224
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 225 ERFKCIASTYYRGAQAIIIVFN 246
>gi|380449163|gb|AFD54570.1| Ras-related protein Rab7 [Litopenaeus vannamei]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++JLG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIJLGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQA 110
>gi|123480054|ref|XP_001323182.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121906042|gb|EAY10959.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 197
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIEL--WDTS 61
K L++G GKT L + LC T ++ T GV + Y L+ KT+I+L WDT+
Sbjct: 7 KFLLVGDQAVGKTSLVHRLCRNTYSDNSEETVGVEFM----PYNLNIDKTQIKLQIWDTA 62
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
G ++ S+ A+ R+ G++ F + H+S
Sbjct: 63 GQEQYRSLAKAYFRNAVGVVLFF--AINDHLS 92
>gi|194388428|dbj|BAG60182.1| unnamed protein product [Homo sapiens]
Length = 274
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 77 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 134
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 135 ERFKCIASTYYRGAQAIIIVFN 156
>gi|167523210|ref|XP_001745942.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775743|gb|EDQ89366.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M+ KI++LG GKT L D + T G H +D + +++LWDT
Sbjct: 1 MEAKIVLLGAQSVGKTSLVLRYVDDAFEDAVSSTIGASFFT--HKLTVDGCRVKLQLWDT 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVK 120
+G +F S+ P + R + V++ P + E+ + +D + C+ + V
Sbjct: 59 AGQERFRSMAPMYYRGSSAALIVYDVTTPKSLDEVKGWMAELQRNTDTSTVMCICANKVD 118
Query: 121 PGRGDS 126
+ D+
Sbjct: 119 LLKDDA 124
>gi|118365218|ref|XP_001015830.1| Ras family protein [Tetrahymena thermophila]
gi|89297597|gb|EAR95585.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777802|dbj|BAJ21297.1| Rab-family small GTPase Rab6B [Tetrahymena thermophila]
Length = 227
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
+K KI+ LG GKT + N D T E PT G+ + C+ + +D ++LWD
Sbjct: 10 VKFKIVFLGDQSVGKTSIINRFIYDNFTGSE-QPTVGIDFI-CK-TLQMDNKTLRLQLWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVF 84
T+G +F+S+ P++ RD + I V+
Sbjct: 67 TAGQERFKSLIPSYIRDSNAAIIVY 91
>gi|222144317|ref|NP_001138414.1| ras-related protein Rab-34 isoform 4 [Homo sapiens]
gi|16877141|gb|AAH16841.1| RAB34 protein [Homo sapiens]
gi|30582243|gb|AAP35348.1| RAB34, member RAS oncogene family [Homo sapiens]
gi|61360135|gb|AAX41817.1| RAB34 member RAS oncogene family [synthetic construct]
gi|119571512|gb|EAW51127.1| RAB34, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123994161|gb|ABM84682.1| RAB34, member RAS oncogene family [synthetic construct]
gi|124126869|gb|ABM92207.1| RAB34, member RAS oncogene family [synthetic construct]
Length = 251
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|326512278|dbj|BAJ96120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G + E +D +++WDT
Sbjct: 7 MLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKE--VKIDDRLFTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V +L + + F+ Q SD N +L+
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLIQASPSDPENFPFVLLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|384248626|gb|EIE22109.1| ras-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 223
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+L++G GKT L C T ++EY T GV + E + + ++ LWDT+G
Sbjct: 8 MKVLVVGSRCVGKTCLIKQFCRATYSDEYTKTMGVDFM--EKVQRVGSEDVKLMLWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
F S+ ++ + + VF++
Sbjct: 66 QEGFTSITRSYYKGAEAAVLVFST 89
>gi|30584833|gb|AAP36669.1| Homo sapiens RAB34, member RAS oncogene family [synthetic
construct]
gi|61370005|gb|AAX43426.1| RAB34 member RAS oncogene family [synthetic construct]
Length = 252
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|73967018|ref|XP_868242.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Canis lupus
familiaris]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|389586044|dbj|GAB68773.1| small GTPase Rab5b [Plasmodium cynomolgi strain B]
Length = 205
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+KI++LG GK+ +A LC ++++ T G + H+ L T ++ +WDT
Sbjct: 32 KVKIVLLGDSGVGKSSIALYLCHGRFSDKHQVTIGAAFLH--HTIELKNGATMKLHIWDT 89
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F S+ P + RD +G + V++S
Sbjct: 90 GGQERFRSMAPLYYRDAYGAVVVYDS 115
>gi|395748734|ref|XP_003778823.1| PREDICTED: ras-related protein Rab-34 [Pongo abelii]
Length = 259
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|348521104|ref|XP_003448066.1| PREDICTED: ras-related protein Rab-33B-like [Oreochromis niloticus]
Length = 242
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L++G GKT L + LC T GV E +D K +++LWDT+G
Sbjct: 24 FKVLVIGDSGVGKTCLTHRLCGGEFPCRSEATIGVDFRE--RVLEIDGEKIKLQLWDTAG 81
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFNSGVPGHIS 93
+F +S+ + R+VH ++F+++ P S
Sbjct: 82 QERFRKSMVQHYYRNVHAVLFIYDVTCPASFS 113
>gi|119571514|gb|EAW51129.1| RAB34, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 273
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|307167470|gb|EFN61043.1| Ras-related protein Rab-23 [Camponotus floridanus]
Length = 240
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLERE--IEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + ++S
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAYSS 91
>gi|222144319|ref|NP_001138415.1| ras-related protein Rab-34 isoform 5 [Homo sapiens]
gi|332848219|ref|XP_511360.3| PREDICTED: ras-related protein Rab-34 isoform 5 [Pan troglodytes]
gi|397483078|ref|XP_003812732.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Pan paniscus]
gi|426348893|ref|XP_004042056.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Gorilla gorilla
gorilla]
Length = 316
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|429966212|gb|ELA48209.1| small GTP-binding protein domain protein [Vavraia culicis
'floridensis']
Length = 198
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L + + E YHPT G+ + L ++LWDT+
Sbjct: 4 KYKIVFLGDPSVGKTTLISQFTNKEADENYHPTIGIDFTYLRVN--LQGKDVRLQLWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G ++ S+ P + R + VF+
Sbjct: 62 GQERYNSIIPNYTRKSFAAVIVFD 85
>gi|410980333|ref|XP_003996532.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Felis catus]
Length = 308
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|440298757|gb|ELP91388.1| GTP-binding protein YPTM2, putative [Entamoeba invadens IP1]
Length = 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M KILI+G GKT + CD EE T GV +Y T K ++LWDT
Sbjct: 13 MTFKILIIGESAVGKTAILERYCDNEFHEELISTIGVDFKSRVINYKGKTIK--LQLWDT 70
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F ++ ++ R HG + V++
Sbjct: 71 AGQERFRNITSSYYRGTHGCLIVYD 95
>gi|332256134|ref|XP_003277172.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Nomascus
leucogenys]
Length = 316
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|449513525|ref|XP_002199804.2| PREDICTED: rab-like protein 5-like [Taeniopygia guttata]
Length = 108
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 75 RDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGR-GDSSG 128
+D HG+I +FN +P H+ E+ ++Y FV Q L + +CLL+ + KPG GD+
Sbjct: 2 KDSHGVIIIFNPELPSHLKEIEMWYSCFVQQQPLLDSQCLLVAHHKPGSAGDTEN 56
>gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464144|pdb|1T91|B Chain B, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464145|pdb|1T91|C Chain C, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464146|pdb|1T91|D Chain D, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464282|pdb|1YHN|A Chain A, Structure Basis Of Rilp Recruitment By Rab7
Length = 207
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ P L + D F+ Q+
Sbjct: 67 LERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQA 110
>gi|194911438|ref|XP_001982350.1| GG12550 [Drosophila erecta]
gi|190656988|gb|EDV54220.1| GG12550 [Drosophila erecta]
Length = 186
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 5 ILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDH 64
+LILG AGK+ L +L + + P++ E S+ ++ + ++LWD +G+
Sbjct: 23 LLILGLDNAGKSALTASLAKMFNGDSKEPSKQAS----EWSFTINNCR--VQLWDINGEL 76
Query: 65 KFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGRG 124
K WP + + V +IFV +S +SE + +L+ L++ N K G
Sbjct: 77 KNRQFWPNYYKKVKVLIFVLDSTDALRLSEARCVLCDVLMHQELDKAPLLILSNKKDASG 136
Query: 125 DSS 127
S
Sbjct: 137 SLS 139
>gi|449444034|ref|XP_004139780.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449502892|ref|XP_004161772.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L ++D F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQAN 111
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 59 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 112
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 113 TAGQERFRTITSSYYRGAHGIIVVYD 138
>gi|332256138|ref|XP_003277174.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Nomascus
leucogenys]
Length = 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|301753058|ref|XP_002912366.1| PREDICTED: ras-related protein Rab-34-like [Ailuropoda melanoleuca]
Length = 322
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 117 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 174
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 175 ERFKCIASTYYRGAQAIIIVFN 196
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + E +D +K +++WDT+
Sbjct: 10 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKE--ITIDNNKQVALQIWDTA 67
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 68 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 116
>gi|224093888|ref|XP_002310036.1| predicted protein [Populus trichocarpa]
gi|222852939|gb|EEE90486.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++ T G V E +D +++W+T+G
Sbjct: 5 LKVIVLGDSGVGKTSLMNQYVYNKYSQQSKATIGADFVTKE--LQIDDKLVTLQIWNTAG 62
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ PAF R + ++ V L +++ F+ Q+D N+
Sbjct: 63 QERFQSLGPAFYRGADCCVLEYDVNVQKSFETLNNWHEEFLKQTDFND 110
>gi|444518337|gb|ELV12099.1| Ras-related protein Rab-34 [Tupaia chinensis]
Length = 324
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 55 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 112
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 113 ERFKCIASTYYRGAQAIIIVFN 134
>gi|209882520|ref|XP_002142696.1| Ras family protein SEC4 [Cryptosporidium muris RN66]
gi|209558302|gb|EEA08347.1| Ras family protein SEC4, putative [Cryptosporidium muris RN66]
Length = 215
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
IK+L+LG GK+ L C+ + T GV +I+E L+ K ++++W
Sbjct: 13 IKLLLLGDSAVGKSSLLLRFCENKFENSFVLTIGVDFKSKIIE------LNGKKLKLQVW 66
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ PA+ R G+I V++
Sbjct: 67 DTAGQERFRTITPAYFRSAMGVILVYD 93
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F +V ++ R HGII V++
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYD 89
>gi|148675884|gb|EDL07831.1| RAB1, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149044747|gb|EDL97933.1| rCG23301, isoform CRA_a [Rattus norvegicus]
Length = 99
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|239791411|dbj|BAH72176.1| ACYPI000150 [Acyrthosiphon pisum]
Length = 102
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T + Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDF--KIRTIKLDNKTVKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGH 91
+F ++ ++ R HGII V+++ + H
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDAPIWRH 95
>gi|222144313|ref|NP_001136096.2| ras-related protein Rab-34 isoform 2 [Homo sapiens]
gi|332848223|ref|XP_003315608.1| PREDICTED: ras-related protein Rab-34 isoform 3 [Pan troglodytes]
gi|397483084|ref|XP_003812735.1| PREDICTED: ras-related protein Rab-34 isoform 5 [Pan paniscus]
gi|426348899|ref|XP_004042059.1| PREDICTED: ras-related protein Rab-34 isoform 5 [Gorilla gorilla
gorilla]
Length = 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 38 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 91
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 92 DTAGQERFRTITSSYYRGAHGIIVVYD 118
>gi|297700366|ref|XP_002827218.1| PREDICTED: ras-related protein Rab-34 isoform 1 [Pongo abelii]
Length = 316
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 68
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIIVYD 94
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
KI+I+G AGK+ L D T +E Y T GV +I + +D ++++WDT+
Sbjct: 9 KIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKI----KTVKIDNVTIKLQIWDTA 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ + R HGII V++
Sbjct: 65 GQERFRTITSTYYRGAHGIITVYD 88
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F +V ++ R HGII V++
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYD 89
>gi|378755061|gb|EHY65088.1| GTP-binding protein YPTM2 [Nematocida sp. 1 ERTm2]
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KIL++G GKT + D E Y T GV + +D +++LWDT+G
Sbjct: 9 KILVVGSSGVGKTCILLRYTDSIYKETYGTTIGVDFKM--KNITVDDKVVKLQLWDTAGQ 66
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+F ++ ++ R+ +GI+ VF++ P ++L
Sbjct: 67 ERFRTITSSYYRNANGILLVFDTTDPESFNDL 98
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + +Y T G + +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLT--KDLTIDNKTVSLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + ++ ++ L + D F+ QS+++N
Sbjct: 67 QERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSN 114
>gi|15667941|gb|AAL05587.1|AF327350_1 Ras-related GTP-binding protein RAB39 [Homo sapiens]
Length = 211
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 55 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 112
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 113 ERFKCIASTYYRGAQAIIIVFN 134
>gi|226295502|gb|ACO40522.1| Rab7-like protein [Pinctada martensi]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + + +Y T G + D T +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMSQYVNKKFSNQYKATIGSADFLTKEVMVEDRLLT-MQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R H + VF+ +P L + D F+ Q+ D N ++I N
Sbjct: 68 QERFQSLGVAFYRGAHCCVLVFDVPMPNTFESLDSWRDEFLIQASPRDPENFPFVVIGN 126
>gi|344245132|gb|EGW01236.1| Ras-like GTP-binding protein YPT1 [Cricetulus griseus]
Length = 96
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|432843376|ref|XP_004065605.1| PREDICTED: ras-related protein Rab-33B-like [Oryzias latipes]
Length = 242
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
K+L++G GKT L + LC + T GV E ++ K +++LWDT+G
Sbjct: 24 FKVLVIGDSGVGKTCLTHRLCAGEFLSKVEATIGVDFRE--RVLEVEGEKIKLQLWDTAG 81
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+F +S+ + R+VH ++FV++ P L
Sbjct: 82 QERFRKSMVQQYYRNVHAVLFVYDVTCPASFRGL 115
>gi|340387066|ref|XP_003392029.1| PREDICTED: ras-like GTP-binding protein YPT1-like, partial
[Amphimedon queenslandica]
Length = 104
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ KILI+G GK+ LC T +Y T GV + +D ++ WDT
Sbjct: 7 ITFKILIVGNPHVGKSCFLTRLCTNTFTTKYASTIGVDFYS--RALVIDDKTVALQFWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+SV A+ R G+I +++
Sbjct: 65 AGQERFQSVTKAYYRGADGVILMYD 89
>gi|297700368|ref|XP_002827219.1| PREDICTED: ras-related protein Rab-34 isoform 2 [Pongo abelii]
Length = 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 111 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 168
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 169 ERFKCIASTYYRGAQAIIIVFN 190
>gi|75812920|ref|NP_001028784.1| ras-related protein Rab-34 [Bos taurus]
gi|73587147|gb|AAI03396.1| RAB34, member RAS oncogene family [Bos taurus]
Length = 267
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ V L +++ F+ Q++ +N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSN 114
>gi|221127104|ref|XP_002163996.1| PREDICTED: ras-related protein Rab-18-like [Hydra magnipapillata]
Length = 204
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T ++ T GV + +D ++ ++ LWDT+G
Sbjct: 9 LKILIIGESGVGKSSLLIRFTDDTFDQDIGATIGVDFKV--KTVEVDGNRMKLALWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV--K 120
+F ++ P++ R G+I V++ V +L + + T + + +L+ N K
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVSVRQTFDKLNDWLNECETYATKQDIVKMLVGNKIDK 126
Query: 121 PGR 123
PGR
Sbjct: 127 PGR 129
>gi|74227833|dbj|BAE35734.1| unnamed protein product [Mus musculus]
Length = 445
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 240 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 297
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 298 ERFKCIASTYYRGAQAIIIVFN 319
>gi|348567647|ref|XP_003469610.1| PREDICTED: ras-related protein Rab-34-like [Cavia porcellus]
Length = 496
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 291 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 348
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 349 ERFKCIASTYYRGAQAIIIVFN 370
>gi|320168875|gb|EFW45774.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVDDKLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + F+ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQA 110
>gi|56967696|gb|AAW31997.1| CG2885 [Drosophila melanogaster]
Length = 185
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 6 LILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGDHK 65
L+LG GK+ L D E+Y T G+ + S L + +++WDTSGD +
Sbjct: 1 LVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDV--KARSVELVSRVMMLQVWDTSGDKR 58
Query: 66 FESVWPAFQRDVHGIIFVFN 85
F S+ P+ R HGI+ V++
Sbjct: 59 FNSLMPSNYRSAHGILLVYD 78
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDNKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|123401208|ref|XP_001301812.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736246|gb|AAX97452.1| small Rab GTPase Rab6b [Trichomonas vaginalis]
gi|121883039|gb|EAX88882.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 191
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K K++ LG GKT L N L + +Y+ T GV + +++WDT+
Sbjct: 4 KCKVVFLGSAGVGKTSLLNRLMTDEFSNQYNTTIGVDFFT--KPVQVQGRTVTLQIWDTA 61
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
G +F+S+ P++ RD + V++ E +Y+ V N KC+L+ N
Sbjct: 62 GQERFKSLMPSYIRDSSVAVIVYDVSDEKSFDEAQEWYET-VMHERGNEAKCVLVGN 117
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|441661195|ref|XP_004091485.1| PREDICTED: ras-related protein Rab-34 [Nomascus leucogenys]
Length = 268
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 169
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 170 ERFKCIASTYYRGAQAIIIVFN 191
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|440291820|gb|ELP85062.1| rab17, putative [Entamoeba invadens IP1]
Length = 204
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTS--KTEIELW 58
+++K+L++G GKT + LC T E Y T GV + Y L+ K E+ LW
Sbjct: 8 LRLKVLVIGQPAVGKTSILRQLCQGTFVEGYRGTIGVEF----YPYTLEIQGKKCELTLW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNS 86
D +G +S+ A+ HG I V+++
Sbjct: 64 DVAGQETSKSLSRAYYNGAHGAIVVYDT 91
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVF---NSGVPGHISELLLFYDYFVTQSDLNNHKCLLI 116
T+G +F ++ ++ R HGII V+ + G ++ + L D + ++ N LL+
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASE----NVNKLLV 122
Query: 117 DN 118
N
Sbjct: 123 GN 124
>gi|290994739|ref|XP_002679989.1| rab family small GTPase [Naegleria gruberi]
gi|284093608|gb|EFC47245.1| rab family small GTPase [Naegleria gruberi]
Length = 255
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTS 61
+K++++G GKT LA + ++ PT G+ V C + L+T +T ++LWDT+
Sbjct: 79 VKVVLVGDYGVGKTSLAKKISQRGFTTQHQPTIGIDFVVC--TLILNTKETVRLQLWDTA 136
Query: 62 GDHKFESVWPAFQRDVHGIIFV 83
G KF+++ +F R GI +
Sbjct: 137 GQEKFKALASSFFRGADGIFVI 158
>gi|222144315|ref|NP_001136097.2| ras-related protein Rab-34 isoform 3 [Homo sapiens]
gi|332848225|ref|XP_003315609.1| PREDICTED: ras-related protein Rab-34 isoform 4 [Pan troglodytes]
gi|426348901|ref|XP_004042060.1| PREDICTED: ras-related protein Rab-34 isoform 6 [Gorilla gorilla
gorilla]
Length = 268
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 112 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 169
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 170 ERFKCIASTYYRGAQAIIIVFN 191
>gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene family [Xenopus laevis]
gi|50414980|gb|AAH77884.1| Rab7-prov protein [Xenopus laevis]
Length = 207
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|431890968|gb|ELK01847.1| Ras-related protein Rab-34 [Pteropus alecto]
Length = 229
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 55 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 112
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 113 ERFKCIASTYYRGAQAIIIVFN 134
>gi|428177507|gb|EKX46386.1| hypothetical protein GUITHDRAFT_152339 [Guillardia theta CCMP2712]
Length = 206
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E + +D ++ WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVN--VDDRLVTMQTWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ V L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVNVAKTFENLDSWRDEFLIQA 110
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|4587775|gb|AAD25874.1| GTP-binding protein rah [Bos taurus]
Length = 236
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
+++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 3 RVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 60
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 61 ERFKCIASTYYRGAQAIIIVFN 82
>gi|89258427|gb|ABD65437.1| Rab18 [Suberites domuncula]
Length = 202
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K+LI+G AGK+ L + T + T GV + LD +T++ +WDT
Sbjct: 4 VSLKLLIIGDSGAGKSSLLLRFTNDTFDPDVSATIGVDF--KVKTLVLDEKRTKLSIWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLF---YDYFVTQSDL 108
+G +F ++ P++ R G+I V+++ L ++ D + T+ DL
Sbjct: 62 AGQERFRTLTPSYYRGAQGVILVYDASSRESFEGLEVWLNELDTYATKKDL 112
>gi|440298115|gb|ELP90756.1| hypothetical protein EIN_025950 [Entamoeba invadens IP1]
Length = 197
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK---TEIELWDT 60
K++++G + GKT + + + D +E PT G C Y++ T +++WDT
Sbjct: 10 KVVLVGSMSTGKTCIQSWMKDKIFSETPMPTIGA----CYFRYSVQIPNYKCTILDVWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
SGD ++ +V P + RD G I VF+
Sbjct: 66 SGDERYRNVMPIYFRDCDGAIVVFD 90
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + V++ P L + D F+ Q SD N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVLGN 125
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GK+ L D T +E Y T GV + +D + ++++WDT+G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKI--KTVKIDNTTIKLQIWDTAGQ 66
Query: 64 HKFESVWPAFQRDVHGIIFVF---NSGVPGHISELLL 97
+F ++ + R HGII V+ N HI+E L
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWL 103
>gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|147905326|ref|NP_001083352.1| RAB7A, member RAS oncogene family [Xenopus laevis]
gi|38014729|gb|AAH60401.1| MGC68523 protein [Xenopus laevis]
gi|51704077|gb|AAH80905.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267364|emb|CAJ82793.1| rab7,member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 207
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQA 110
>gi|159906365|gb|ABX10871.1| RAB1A-like protein [Capra hircus]
Length = 161
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 45 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 98
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 99 TAGQERFRTITSSYYRGAHGIIVVYD 124
>gi|195350792|ref|XP_002041922.1| GM11275 [Drosophila sechellia]
gi|194123727|gb|EDW45770.1| GM11275 [Drosophila sechellia]
Length = 215
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQG----VRIVECEHSYALDTSKTEIELW 58
KIL+LG GK+ L D E+Y T G VR VE + +++W
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVM------LQIW 61
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+GD +F+S+ P++ R GI+ V++
Sbjct: 62 DTAGDERFKSLLPSYYRGATGILLVYD 88
>gi|145513861|ref|XP_001442841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834271|emb|CAI44501.1| rab_C34 [Paramecium tetraurelia]
gi|124410202|emb|CAK75444.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
+K+++LG GKT + CD ++ Y T GV +I+ + K ++++W
Sbjct: 10 VKVIVLGDSGVGKTNILTQFCDQKFSQNYTATIGVDFKIKILNVQDK------KIKLQIW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELL 96
DT+G +F ++ + + GIIFV++ + V G I +L
Sbjct: 64 DTAGQERFRNITQTYYKGAFGIIFVYSLIDRNSFNNVEGWIKSIL 108
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + Y T GV R VE LD ++++WD
Sbjct: 11 KLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVE------LDGKSVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSD---LN 109
T+G +F ++ ++ R HGII V++ + V +SE+ D + + S L
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEI----DRYASDSVCKLLV 120
Query: 110 NHKCLLIDNVKPGRGDSSGHAHSL 133
+KC L+D+ ++ A SL
Sbjct: 121 GNKCDLVDSKVVDTEEAKAFAESL 144
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1
[Oryctolagus cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda
melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 6 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 59
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 60 TAGQERFRTITSSYYRGAHGIIVVYD 85
>gi|428166672|gb|EKX35644.1| hypothetical protein GUITHDRAFT_146344 [Guillardia theta CCMP2712]
Length = 367
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+ I++LG AGKT L L D + PT G R L + K I+ +D G
Sbjct: 20 VTIIVLGLDNAGKTTLLYGLKDELPQADVTPTIGFR------PSKLISGKYTIQWFDVGG 73
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPG 122
F VW ++ +VHG+I+V ++ P E D + + L+ N +
Sbjct: 74 AKNFRRVWQSYYPEVHGVIYVVDAAAPERFEEAKETLDKTLESEGIPGKPVLIFANKQDL 133
Query: 123 RGDSSGHAHSLR 134
G S H S +
Sbjct: 134 DGCISAHELSQK 145
>gi|354478109|ref|XP_003501258.1| PREDICTED: ras-related protein Rab-7b-like [Cricetulus griseus]
gi|344236710|gb|EGV92813.1| Ras-related protein Rab-7b [Cricetulus griseus]
Length = 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F SV F + G I F+ P L ++ D
Sbjct: 67 QERFRSVVSTFYKGSDGCILAFDVTDPESFEALGIWRD 104
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 9 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 63 TAGQERFRTITSSYYRGAHGIIVVYD 88
>gi|38048295|gb|AAR10050.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 123
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|19114436|ref|NP_593524.1| GTPase Ypt71 [Schizosaccharomyces pombe 972h-]
gi|74698144|sp|Q9HDY0.1|YPT71_SCHPO RecName: Full=GTP-binding protein ypt71
gi|12188974|emb|CAC21483.1| GTPase Ypt71 [Schizosaccharomyces pombe]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + EY T G + +D ++LWDT+G
Sbjct: 9 LKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLT--KDVVVDDKLVTLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F+S+ AF R + V+N
Sbjct: 67 QERFQSLGMAFYRGADCCVIVYN 89
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 58
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 59 TAGQERFRTITSSYYRGAHGIIVVYD 84
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|290981522|ref|XP_002673479.1| rab family small GTPase [Naegleria gruberi]
gi|284087063|gb|EFC40735.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + +Y T G + E ++ + +WDT+G
Sbjct: 7 LKVIVLGDSSVGKTSLMNQFVSKKFSTQYKATIGADFLTKE--VMIEDKMCSLSIWDTAG 64
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F S+ AF R + VF+ VP + + D F+ Q+ D +N +LI N
Sbjct: 65 QERFHSLGFAFFRGSDACVLVFDITVPKTFENVNNWRDEFLMQTTPEDPDNFPFVLIGN 123
>gi|242004078|ref|XP_002422965.1| rab9 and, putative [Pediculus humanus corporis]
gi|212505881|gb|EEB10227.1| rab9 and, putative [Pediculus humanus corporis]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT + N + + +Y T G + + + +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSIMNQYVNNKFSNQYKATIGADFLT--RDVDVGDRRVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ P L + D F+ Q+ D +N ++I N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVSAPTTYKSLENWRDEFLIQASPRDPDNFPFVVIGN 125
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|145513438|ref|XP_001442630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831381|emb|CAI39293.1| rab_C67 [Paramecium tetraurelia]
gi|124409983|emb|CAK75233.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDT---SKTEIELW 58
K+KIL+LG GK+ L N D + T GV E+ + T S+ +++W
Sbjct: 4 KVKILMLGERSVGKSSLLNRYIDDKFYDTIQATLGV-----EYKQKVITNGESQLTVQVW 58
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD-------LNNH 111
DT+G +F + P + R+ G+ V++ +++ + DY Q D L +
Sbjct: 59 DTAGQERFRYIAPIYYRNAQGVPMVYSVVDRDSFNQVQTWMDYLKDQVDNQLISIILVAN 118
Query: 112 KCLLIDN-VKPGRGDSSGHAHSLR 134
KC L + V G +S+R
Sbjct: 119 KCDLENRHVSTSEGQELAQLYSVR 142
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 65
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYD 91
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|327286112|ref|XP_003227775.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 138
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 58
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 59 TAGQERFRTITSSYYRGAHGIIVVYD 84
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 23 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 76
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 77 TAGQERFRTITSSYYRGAHGIIVVYD 102
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|224085264|ref|XP_002307527.1| predicted protein [Populus trichocarpa]
gi|118487254|gb|ABK95455.1| unknown [Populus trichocarpa]
gi|222856976|gb|EEE94523.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG AGKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R V++ V L +++ F+ Q++ ++ K
Sbjct: 67 QERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPK 116
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHK 112
T+G +F ++ ++ R HGII V++ + V ++E+ + + V + L +K
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKL-LVGNK 122
Query: 113 CLLIDN 118
C L+DN
Sbjct: 123 CDLVDN 128
>gi|116672840|gb|ABK15561.1| small GTPase Rab2 [Capsicum annuum]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG AGKT L N + + +Y T G + E + + +++WDT
Sbjct: 7 MLLKVIILGDSGAGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQF--EDRLYTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V L + + F+ Q SD +N +++
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDPDNFPFVVLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta
CCMP2712]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|145509483|ref|XP_001440680.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834542|emb|CAI44578.1| rab_A11 [Paramecium tetraurelia]
gi|124407908|emb|CAK73283.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT + CD ++ Y T GV + ++ K ++++WDT+G
Sbjct: 10 VKVIVLGDSGVGKTNILTQYCDQKFSQNYMATIGVDFKI--KTITVEDKKIKLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVF 84
+F ++ + + GIIFV+
Sbjct: 68 QERFRNITQTYYKGAFGIIFVY 89
>gi|321458347|gb|EFX69417.1| hypothetical protein DAPPUDRAFT_62315 [Daphnia pulex]
Length = 240
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+++LG + GK+ L N C + Y T GV E E L +++WDT+G
Sbjct: 52 KVIVLGNVAVGKSCLVNRFCHSVFDQNYKATIGVDF-EVERFDVLQVP-FNLQIWDTAGQ 109
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + ++ R H I+ VF+
Sbjct: 110 ERFKCIASSYYRGAHAIVVVFD 131
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp
At Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3
In Complex With The Gap Domain Of Tbc1d20 From Homo
Sapiens
Length = 175
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VMVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQA 110
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIIVYD 92
>gi|145494342|ref|XP_001433165.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834436|emb|CAI44545.1| rab_B11 [Paramecium tetraurelia]
gi|124400282|emb|CAK65768.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT + CD ++ Y T GV + ++ K ++++WDT+G
Sbjct: 10 VKVIVLGDSGVGKTNILTQYCDQKFSQNYMATIGVDFKI--KTITVEDKKIKLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVF 84
+F ++ + + GIIFV+
Sbjct: 68 QERFRNITQTYYKGAFGIIFVY 89
>gi|167384890|ref|XP_001737129.1| GTP-binding protein YPT6 [Entamoeba dispar SAW760]
gi|165900198|gb|EDR26599.1| GTP-binding protein YPT6, putative [Entamoeba dispar SAW760]
Length = 128
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++I ++I+G GKT LAN L + E Y T G+ I + LD + L DT
Sbjct: 6 LRINVVIVGASTVGKTSLANQLVNSCFDEHYETTHGMDIF--SYKMELDNCVVSLTLRDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
G ++ S+ + R+ HG + V++
Sbjct: 64 CGQEQYRSLAAQYYRETHGALVVYD 88
>gi|154550427|gb|ABS83488.1| RAB1 [Haliotis cracherodii]
Length = 140
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|119393799|gb|ABL74415.1| Rab7 [Aedes pseudoscutellaris]
Length = 208
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKE--VVIDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+ + AF R + V+++ P L + D F+ Q+
Sbjct: 67 QERFQLLGVAFYRGADCYVLVYDTTAPNTFKNLDSWRDEFLIQA 110
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 18 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 71
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYD 97
>gi|195402069|ref|XP_002059632.1| GJ14874 [Drosophila virilis]
gi|194147339|gb|EDW63054.1| GJ14874 [Drosophila virilis]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 17/122 (13%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
KIL+LG GKT L + Y T GV R VE + K ++++WD
Sbjct: 8 KILMLGDAGVGKTCLLQRFVENRFTGNYKCTVGVDSKIRTVE------ISGHKVKLQIWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD---LNNHKCLLI 116
T+G+ ++ S+ ++ R V GII VF++ + DY++ + D N + LL+
Sbjct: 62 TAGEERYRSMMSSYYRHVQGIILVFDTTRRRSYQNV----DYWLKEIDKHAATNVRILLV 117
Query: 117 DN 118
N
Sbjct: 118 GN 119
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + E +D +K +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKE--IIIDNNKPVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 115
>gi|195558515|ref|XP_002077302.1| GD11278 [Drosophila simulans]
gi|194202401|gb|EDX15977.1| GD11278 [Drosophila simulans]
Length = 215
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQG----VRIVECEHSYALDTSKTEIELW 58
KIL+LG GK+ L D E+Y T G VR VE + +++W
Sbjct: 8 FKILVLGDCGVGKSCLLMRFSDDRFTEKYVCTVGIDFRVRSVEVTGRMVM------LQIW 61
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+GD +F+S+ P++ R GI+ V++
Sbjct: 62 DTAGDERFKSLLPSYYRGATGILLVYD 88
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHK 112
T+G +F ++ ++ R HGII V++ + V +SE+ + + V + + N K
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLSEIDRYANESVCKLLVGN-K 122
Query: 113 CLLIDN 118
C L++N
Sbjct: 123 CDLVEN 128
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GK+ L D T +E Y T GV + +D + ++++WDT+G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKI--KTVKIDNTTIKLQIWDTAGQ 66
Query: 64 HKFESVWPAFQRDVHGIIFVF---NSGVPGHISELLL 97
+F ++ + R HGII V+ N HI+E L
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWL 103
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 39 KLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 92
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 93 TAGQERFRTITSSYYRGAHGIIVVYD 118
>gi|395511720|ref|XP_003760101.1| PREDICTED: ras-related protein Rab-12 [Sarcophilus harrisii]
Length = 246
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 44 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 99
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 100 TAGQERFNSITSAYYRSAKGIILVYD 125
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 34 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 87
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 88 DTAGQERFRTITSSYYRGAHGIIVVYD 114
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV ++ L+ ++++WDT+G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTFELEGKTVKLQIWDTAGQ 70
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 71 ERFRTITSSYYRGAHGIIIVYD 92
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 54 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 107
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 108 TAGQERFRTITSSYYRGAHGIIVVYD 133
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 27 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 80
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 81 TAGQERFRTITSSYYRGAHGIIVVYD 106
>gi|119620325|gb|EAW99919.1| RAB1A, member RAS oncogene family, isoform CRA_c [Homo sapiens]
Length = 122
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 65
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDT 60
+KILI+G GK+ L D T E T GV R+ S +D ++ ++ +WDT
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDTFDPEISATIGVDFRVT----SRTVDGNRVKLAIWDT 67
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+G +F ++ P++ R G+I V++ L + + T S NN +L+ N
Sbjct: 68 AGQERFRTLTPSYYRGAQGVICVYDVTNRCSFERLDHWMNEVDTYSTKNNAIKMLVGN 125
>gi|47220180|emb|CAG07321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 211
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+++G GKT L C T + T GV E S LD K ++++WDT+G
Sbjct: 39 FKIIVIGDSNVGKTCLTCRFCGGTFMKNPEATIGVDFRE--RSLELDGVKIKLQIWDTAG 96
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFN 85
+F S+ + R VH +IFV++
Sbjct: 97 QERFRRSMVEHYYRSVHAVIFVYD 120
>gi|321475470|gb|EFX86433.1| hypothetical protein DAPPUDRAFT_222118 [Daphnia pulex]
Length = 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
+ +I+I+G GK+ L D AE PT GV R+++ E D ++ +++L
Sbjct: 9 QFRIIIIGNSTVGKSSLLKYFTDGRFAEVSDPTVGVDFFARLLQVE-----DGTRIKLQL 63
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFN 85
WDT+G +F S+ ++ R+ G++ VF+
Sbjct: 64 WDTAGQERFRSITKSYFRNSVGVLLVFD 91
>gi|134024040|gb|AAI35229.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 274
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 72 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 127
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 128 TAGQERFNSITSAYYRSAKGIILVYD 153
>gi|115312968|gb|AAI24015.1| rab12 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELW 58
K++++I+G GKT L D T E T GV +I E L K +++W
Sbjct: 110 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIW 165
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F S+ A+ R GII V++
Sbjct: 166 DTAGQERFNSITSAYYRSAKGIILVYD 192
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 7 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 60
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 61 TAGQERFRTITSSYYRGAHGIIVVYD 86
>gi|281200692|gb|EFA74910.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--LMVDDRVVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + V++ V L + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGN 125
>gi|38048055|gb|AAR09930.1| similar to Drosophila melanogaster Rab1, partial [Drosophila
yakuba]
Length = 119
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV ++ L+ ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTFELEGKTVKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYD 89
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 65
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYD 91
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap
Domain Of Lepb In Complex With Rab1b Bound To Gdp And
Bef3
Length = 181
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VMVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQA 110
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNS 86
T+G +F ++ ++ R HGII V+++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDT 93
>gi|440299673|gb|ELP92221.1| hypothetical protein EIN_117950 [Entamoeba invadens IP1]
Length = 200
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KIL++G GKT + CDL + +Y T GV + + ++++WDT+G
Sbjct: 11 KILVIGDSGVGKTSIMQRYCDLDFSSDYISTVGVDFKP--KMLEVGEKRIKLQIWDTAGQ 68
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPG 122
+F ++ A+ R+ ++ V++ + + ++Y ++ N +++ N K G
Sbjct: 69 ERFMNITAAYFRNTTAVLIVYDVNNRVSLERVQMWYSEVKEKTGKNTPVTVIVGNKKEG 127
>gi|403072080|pdb|4FMD|F Chain F, Espg-Rab1 Complex Structure At 3.05 A
Length = 164
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 1 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 54
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 55 TAGQERFRTITSSYYRGAHGIIVVYD 80
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 5 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 58
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 59 TAGQERFRTITSSYYRGAHGIIVVYD 84
>gi|115435424|ref|NP_001042470.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|56784369|dbj|BAD82408.1| putative RAB7D [Oryza sativa Japonica Group]
gi|113532001|dbj|BAF04384.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|215687298|dbj|BAG91885.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765542|dbj|BAG87239.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187795|gb|EEC70222.1| hypothetical protein OsI_00983 [Oryza sativa Indica Group]
gi|222618023|gb|EEE54155.1| hypothetical protein OsJ_00961 [Oryza sativa Japonica Group]
Length = 207
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G + E +D +++WDT
Sbjct: 7 MLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VQIDDRLFTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V L + + F+ Q SD N +++
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|221060859|ref|XP_002261999.1| Rab5B protein [Plasmodium knowlesi strain H]
gi|193811149|emb|CAQ41877.1| Rab5B protein, putative [Plasmodium knowlesi strain H]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+KI++LG GK+ +A LC ++++ T G + H+ L T ++ +WDT
Sbjct: 32 KVKIVLLGDSGVGKSSIALYLCHGRFSDKHQVTIGAAFLH--HTIELKNGVTMKLHIWDT 89
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F S+ P + RD +G + V++S
Sbjct: 90 GGQERFRSMAPLYYRDAYGAVVVYDS 115
>gi|167387392|ref|XP_001738141.1| GTP-binding protein YPTC1 [Entamoeba dispar SAW760]
gi|165898771|gb|EDR25554.1| GTP-binding protein YPTC1, putative [Entamoeba dispar SAW760]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT L CD Y PT GV L+ +++LWDT+G
Sbjct: 13 KILIIGESGVGKTALMQRFCDNIFEPCYMPTVGVDFKL--KLMKLNNEIIKMQLWDTAGQ 70
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R G++ V++
Sbjct: 71 ERFRNITSSYYRGTQGVLIVYD 92
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|357620414|gb|EHJ72616.1| hypothetical protein KGM_21339 [Danaus plexippus]
Length = 134
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KIL++G GK+ + A + T GV +C+ ++ K ++ +WDT+G
Sbjct: 7 LKILVIGESGVGKSSIILAFTTGDYNSSFPATIGVD-YKCK-VMEVNGLKVKLGIWDTAG 64
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
++ ++ +F RD HG I V++ P + +L + D S N CL++ N
Sbjct: 65 QERYRTLTNSFYRDAHGAILVYDVSEPKTLQKLSEWVDELQVYSTKKNIVCLVVGN 120
>gi|47228002|emb|CAF97631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+LI+G GK+ L D E T GV + A+D ++ ++ +WDT+G
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDMFDPELAATIGVDFKV--KTLAIDGNRAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F ++ P++ R G+I V++ ++L + + T + NN +L+ N
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFAKLENWLNELETYTSRNNLVKMLVGN 122
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 65 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 118
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYD 144
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|125812908|ref|XP_001339327.1| PREDICTED: ras-related protein Rab-35-like [Danio rerio]
Length = 209
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+LI+G GK+ L D + + Y T GV R VE +D + ++++WD
Sbjct: 11 KLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVE------IDGERVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFNSGVP 89
T+G +F ++ + R+ HG+I V++ P
Sbjct: 65 TAGQERFRTITSTYYRNTHGVIIVYDVTNP 94
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LDGKVIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|301786384|ref|XP_002928614.1| PREDICTED: ADP-ribosylation factor-like protein 13A-like
[Ailuropoda melanoleuca]
Length = 345
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+ I+I+G +GKTVL A + PT+ ++ E + L + E+ ++D +G
Sbjct: 22 VTIIIIGLDNSGKTVLVEAF------QRLLPTRMDNCMKSELTTLL-LDEYEVSIYDLNG 74
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D K WP + HG++FV +S G + E+ + + ++ + LL+ N
Sbjct: 75 DMKGRENWPNYYTQAHGLVFVLDSSDSGRMQEVRIILTHLLSDKRVAGKPILLLAN 130
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|389634909|ref|XP_003715107.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|351647440|gb|EHA55300.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|440475602|gb|ELQ44271.1| GTP-binding protein ypt7 [Magnaporthe oryzae Y34]
gi|440481863|gb|ELQ62400.1| GTP-binding protein ypt7 [Magnaporthe oryzae P131]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VLVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQA 110
>gi|67472931|ref|XP_652253.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469075|gb|EAL46866.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790104|dbj|BAD82848.1| small GTPase EhRabM2 [Entamoeba histolytica]
gi|407034040|gb|EKE37020.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449707734|gb|EMD47335.1| small GTPase EhRabM2, putative [Entamoeba histolytica KU27]
Length = 203
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++I ++I+G GKT LAN L + E Y T G+ I + LD + L DT
Sbjct: 6 LRINVVIVGASTVGKTSLANQLVNNCFNEHYETTHGMDIF--SYKMELDNCVVSLTLRDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
G ++ S+ + R+ HG + V++
Sbjct: 64 CGQEQYRSLAAQYYRETHGALVVYD 88
>gi|430814192|emb|CCJ28537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG AGKT L N + + +Y T G + E +D ++LWDT+G
Sbjct: 9 LKVIILGDSGAGKTSLLNQYVNKKFSNQYKATIGADFLTKE--VTVDDRVVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + VF+ L + D F Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTNSKSFETLDSWRDEFFIQA 110
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 8 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYD 87
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|397494200|ref|XP_003817973.1| PREDICTED: ras-related protein Rab-12 [Pan paniscus]
Length = 258
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 56 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 111
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 112 TAGQERFNSITSAYYRSAKGIILVYD 137
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E ++ +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKE--VLIEDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ V L ++D F+ Q+ ++ K
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPK 117
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|195432625|ref|XP_002064317.1| GK20101 [Drosophila willistoni]
gi|194160402|gb|EDW75303.1| GK20101 [Drosophila willistoni]
Length = 216
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
KIL+LG GKT L + + T G+ R+ H++ L +++LWDT+
Sbjct: 11 KILMLGDSGVGKTCLLQRFLENRYTDNSESTVGIDFRL----HTHKLSGHLVDLQLWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNS 86
G+ +F SV + R HGII V+++
Sbjct: 67 GEERFRSVGTTYYRGAHGIILVYDT 91
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|301616136|ref|XP_002937521.1| PREDICTED: ras-related protein Rab-12 [Xenopus (Silurana)
tropicalis]
Length = 345
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELW 58
K++++I+G GKT L D T E T GV +I E L K +++W
Sbjct: 142 FKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIW 197
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F S+ A+ R GII V++
Sbjct: 198 DTAGQERFNSITSAYYRSAKGIILVYD 224
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 8 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 61
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYD 87
>gi|302848283|ref|XP_002955674.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300259083|gb|EFJ43314.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 232
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECE---HSYALDTSKTEIELWD 59
+K++ +G GKT L L ++E PT G C+ Y D + LWD
Sbjct: 21 VKVVFVGSAGVGKTCLIRRLFTDKFSQETQPTIG-----CDFQFKRYKFDNKSVGVTLWD 75
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F++V + R GI+FV++
Sbjct: 76 TAGAERFQAVTANYYRGAQGIVFVYD 101
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+LI+G GK+ L D + + Y T GV R VE E A ++++WD
Sbjct: 11 KLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTA------KLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHK 112
T+G +F ++ ++ R HGII V++ + V + E+ + ++ V++ + N K
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLVGN-K 123
Query: 113 CLLIDN 118
C L DN
Sbjct: 124 CDLTDN 129
>gi|431910239|gb|ELK13312.1| Ras-related protein Rab-1B [Pteropus alecto]
Length = 247
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|85001291|ref|XP_955364.1| Ras-related gtpase [Theileria annulata strain Ankara]
gi|65303510|emb|CAI75888.1| Ras-related gtpase, putative [Theileria annulata]
Length = 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N + +Y T G + E + +D + +++WDT+G
Sbjct: 8 LKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMT--VDDKEVTLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V+++ + + F+ Q D
Sbjct: 66 QERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVD 110
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|290983208|ref|XP_002674321.1| rab family small GTPase [Naegleria gruberi]
gi|284087910|gb|EFC41577.1| rab family small GTPase [Naegleria gruberi]
Length = 224
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KIL++G AGKT L D + Y T GV + ++ + ++LWDT+G
Sbjct: 10 VKILLVGDSGAGKTCLILRYTDNEYNDTYQSTIGVDF-KIKNKLMQNQKVARMQLWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F S+ ++ R V+GI+ VF+
Sbjct: 69 QERFNSIVVSYYRGVNGILVVFD 91
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|147906392|ref|NP_001080036.1| RAB33B, member RAS oncogene family [Xenopus laevis]
gi|37589438|gb|AAH59345.1| MGC69157 protein [Xenopus laevis]
Length = 226
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C E T GV E + +D + +I+LWDT+G
Sbjct: 34 KIIVIGDSNVGKTCLTYRFCTSCFPERTEATIGVDFRE--RTVDIDGERIKIQLWDTAGQ 91
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 92 ERFRKSMVHHYYRNVHAVVFVYD 114
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDT-SKTEIELWDTS 61
+K++++G GKT L + + +++Y T G + E LD K +++WDT+
Sbjct: 6 LKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKE--ITLDGGKKVTLQIWDTA 63
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ QS+++N
Sbjct: 64 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSN 112
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|403222812|dbj|BAM40943.1| Ras-related GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N + +Y T G + E + +D + +++WDT+G
Sbjct: 8 LKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMT--VDDKEVTLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V+++ + + F+ Q D
Sbjct: 66 QERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVD 110
>gi|62897867|dbj|BAD96873.1| RAB18, member RAS oncogene family variant [Homo sapiens]
Length = 206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ LWDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLALWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 20 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 73
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 74 TAGQERFRTITSSYYRGAHGIIVVYD 99
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQA 110
>gi|307777800|dbj|BAJ21296.1| Rab-family small GTPase Rab6C [Tetrahymena thermophila]
Length = 224
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K K++ +G GKT + N + + PT G+ V + LD ++LWDT+
Sbjct: 12 KYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVA--KTLHLDNKTIRLQLWDTA 69
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDY 101
G +F S+ P++ RD I V++ + + + DY
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDY 109
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|158186685|ref|NP_037149.1| ras-related protein Rab-12 [Rattus norvegicus]
gi|449081279|sp|P35284.2|RAB12_RAT RecName: Full=Ras-related protein Rab-12
Length = 243
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 41 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 96
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 97 TAGQERFNSITSAYYRSAKGIILVYD 122
>gi|126321829|ref|XP_001364776.1| PREDICTED: ras-related protein Rab-12-like [Monodelphis domestica]
Length = 246
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 44 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 99
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 100 TAGQERFNSITSAYYRSAKGIILVYD 125
>gi|229594060|ref|XP_001025689.3| Ras family protein [Tetrahymena thermophila]
gi|225567120|gb|EAS05444.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 225
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K K++ +G GKT + N + + PT G+ V + LD ++LWDT+
Sbjct: 12 KYKLVFIGDQSVGKTSIINRFINDSFQGTQQPTVGIDFVA--KTLHLDNKTIRLQLWDTA 69
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDY 101
G +F S+ P++ RD I V++ + + + DY
Sbjct: 70 GQERFRSLIPSYIRDSDAAIIVYDITNQASFASVNKWLDY 109
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|363730689|ref|XP_003640848.1| PREDICTED: ras-related protein Rab-12 [Gallus gallus]
Length = 250
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 48 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 103
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 104 TAGQERFNSITSAYYRSAKGIILVYD 129
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|408797124|gb|AFU92144.1| small GTP binding protein [Arachis hypogaea]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLENWHEEFLKQAN 111
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis
domestica]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|328788822|ref|XP_393641.3| PREDICTED: ras-related protein Rab-23 isoform 2 [Apis mellifera]
gi|380027747|ref|XP_003697580.1| PREDICTED: ras-related protein Rab-23-like [Apis florea]
Length = 240
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLE--RQIEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + +++
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAYSA 91
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|51010979|ref|NP_001003449.1| ras-related protein Rab-18-B [Danio rerio]
gi|82183235|sp|Q6DHC1.1|RB18B_DANRE RecName: Full=Ras-related protein Rab-18-B; Flags: Precursor
gi|50370256|gb|AAH76054.1| RAB18B, member RAS oncogene family [Danio rerio]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + A+D ++ ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTIAIDGNRAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|358056970|dbj|GAA97129.1| hypothetical protein E5Q_03804 [Mixia osmundae IAM 14324]
Length = 181
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++++ I+G +GKT L NAL + +E PT G + + K + LWD
Sbjct: 20 ELEMTIVGLQNSGKTSLVNALSNGQFSESVVPTVGFNVKKVTKG------KVTMRLWDIG 73
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSG 87
G +F S+W + R V+ I+F+ +S
Sbjct: 74 GQPRFRSMWERYCRGVNAILFIIDSA 99
>gi|45592944|ref|NP_996661.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|40807131|gb|AAH65318.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|157422871|gb|AAI53661.1| RAB18A, member RAS oncogene family [Danio rerio]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + A+D ++ ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKV--KTLAVDGNRAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + + +++Y T G + E + DT+ T +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVAIDNDTTAT-MQVWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ P + + D F+ +++++
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSS 115
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|320593309|gb|EFX05718.1| rab small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 670
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKIIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VPVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ + + D F+ Q+ D +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVNNAKSFEAIEGWRDEFLVQASPRDPDNFPFVVLGN 125
>gi|307212547|gb|EFN88270.1| Ras-related protein Rab-23 [Harpegnathos saltator]
Length = 240
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLERE--IEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + +++
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAYSA 91
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GK+ L D T +E Y T GV + +D + ++++WDT+G
Sbjct: 9 KIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKI--KTVKIDNTTIKLQIWDTAGQ 66
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ + R HGII V++
Sbjct: 67 ERFRTITSTYYRGAHGIICVYD 88
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E ++ +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKE--VLIEDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ V L ++D F+ Q+ ++ K
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPK 117
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|332020425|gb|EGI60845.1| Ras-related protein Rab-23 [Acromyrmex echinatior]
Length = 240
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLERE--IEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + +++
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAYSA 91
>gi|167466099|dbj|BAG06944.1| WSDV receptor Rab7 [Marsupenaeus japonicus]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GK L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKASLMNQFVNKKFSNQYKATIGADFLTKE--VMVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ P L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQA 110
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ V L +++ F+ Q++ ++ K
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPK 116
>gi|106507168|ref|NP_077768.2| ras-related protein Rab-12 [Mus musculus]
gi|122065941|sp|P35283.3|RAB12_MOUSE RecName: Full=Ras-related protein Rab-12; AltName: Full=Rab-13
gi|112292983|dbj|BAF02869.1| Rab12 [Mus musculus]
gi|157170004|gb|AAI52767.1| RAB12, member RAS oncogene family [synthetic construct]
Length = 243
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 41 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 96
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 97 TAGQERFNSITSAYYRSAKGIILVYD 122
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LDGKVIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|340503282|gb|EGR29885.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 213
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+ LG GKT + E+ HPT GV + + +D ++LWDT
Sbjct: 20 IKHKIIFLGDQHVGKTCIIERFMYDVFDEKSHPTIGVDFLA--KTITIDEKSIRLQLWDT 77
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F S+ P++ RD + VF+
Sbjct: 78 AGQERFRSLIPSYLRDATCAVIVFD 102
>gi|68075387|ref|XP_679611.1| Rab5B protein [Plasmodium berghei strain ANKA]
gi|56500398|emb|CAH98945.1| Rab5B protein, putative [Plasmodium berghei]
Length = 191
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+K+++LG GK+ +A LC ++ + T G + H+ L +T ++ +WDT
Sbjct: 31 KVKVVLLGDSGVGKSSIALYLCHGRFSDSHQVTIGAAFLH--HTIHLKNGETMKLHIWDT 88
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F ++ P + RD +G I V++S
Sbjct: 89 GGQERFRAMAPLYYRDAYGAIVVYDS 114
>gi|390362529|ref|XP_797032.3| PREDICTED: ras-related protein Rab-34-like [Strongylocentrotus
purpuratus]
Length = 171
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C +Y T GV E E L ++LWDT+G
Sbjct: 52 KVIVVGDVSVGKTCLVNRFCHEVFDRDYKATIGVDF-EVERFDVLGIP-FNLQLWDTAGQ 109
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + A+ R H ++ VF+
Sbjct: 110 ERFKCIAAAYYRGAHVVVIVFD 131
>gi|380799405|gb|AFE71578.1| ras-related protein Rab-12, partial [Macaca mulatta]
Length = 222
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 20 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 77
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 78 GQERFNSITSAYYRSAKGIILVYD 101
>gi|340501363|gb|EGR28156.1| rab6-family small gtpase, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
+K KI+ LG GKT + N D T E PT G+ + C+ + +L+ ++LWD
Sbjct: 11 VKYKIVFLGDQSVGKTSIINRFIYDNFTGSE-QPTVGIDFI-CK-TISLENKTLRLQLWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVF 84
T+G +F+S+ P++ RD + I V+
Sbjct: 68 TAGQERFKSLIPSYIRDSNAAIIVY 92
>gi|195566083|ref|XP_002106620.1| GD16021 [Drosophila simulans]
gi|194204002|gb|EDX17578.1| GD16021 [Drosophila simulans]
Length = 206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYA-LDTSKTEIELWDTS 61
K+LI+G GK+ L + E Y T + I SY L K +E+WDT+
Sbjct: 8 FKVLIVGDTGVGKSSLMMRFTENKFLENYICTVSMDI---RASYVELLEGKMMLEVWDTT 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
GD + +S PAF R HG++ V++
Sbjct: 65 GDERLKSAMPAFYRGAHGVLLVYD 88
>gi|34068436|gb|AAQ56773.1| ras-related GTP-binding protein Rab18 [Pelophylax ridibundus]
Length = 205
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKA--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|402902666|ref|XP_003914219.1| PREDICTED: ras-related protein Rab-12 [Papio anubis]
Length = 247
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 45 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 100
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 101 TAGQERFNSITSAYYRSAKGIILVYD 126
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 65 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 118
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYD 144
>gi|332225892|ref|XP_003262119.1| PREDICTED: ras-related protein Rab-12 [Nomascus leucogenys]
Length = 244
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 42 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 97
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 98 TAGQERFNSITSAYYRSAKGIILVYD 123
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTINLDGKIIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
+F ++ ++ R HGII V++ V H+S
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD--VTDHVS 95
>gi|224046089|ref|XP_002191205.1| PREDICTED: ras-related protein Rab-12 [Taeniopygia guttata]
Length = 250
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 48 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 103
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 104 TAGQERFNSITSAYYRSAKGIILVYD 129
>gi|123484457|ref|XP_001324271.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736266|gb|AAX97462.1| small Rab GTPase RabA6 [Trichomonas vaginalis]
gi|121907151|gb|EAY12048.1| Ras family protein [Trichomonas vaginalis G3]
Length = 206
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSY--ALDTSKTEIELWDTS 61
KI+++G GKT + L D T EE T GV S+ L+ ++++WDT+
Sbjct: 10 KIVVVGSSGVGKTAIVQRLIDGTFREEGQSTVGVEF----KSFICPLEDQSVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F+SV A+ R+ G I V++
Sbjct: 66 GQERFKSVSKAYFRNAVGAILVYD 89
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 73 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 126
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 127 TAGQERFRTITSSYYRGAHGIIVVYD 152
>gi|384945738|gb|AFI36474.1| ras-related protein Rab-12 [Macaca mulatta]
Length = 246
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 44 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 101
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 102 GQERFNSITSAYYRSAKGIILVYD 125
>gi|226494367|ref|NP_001150039.1| ras-related protein Rab7 [Zea mays]
gi|195618620|gb|ACG31140.1| ras-related protein Rab7 [Zea mays]
gi|195625594|gb|ACG34627.1| ras-related protein Rab7 [Zea mays]
gi|195636256|gb|ACG37596.1| ras-related protein Rab7 [Zea mays]
gi|223949159|gb|ACN28663.1| unknown [Zea mays]
Length = 207
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G + E +D +++WDT
Sbjct: 7 MLLKVIILGDSGVGKTSLMNQYVNNRFSNQYKATIGADFLTKE--VQIDDRLFTLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V +L + + F+ Q SD N +++
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPFVVLG 124
Query: 118 N 118
N
Sbjct: 125 N 125
>gi|50311935|ref|XP_455999.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645135|emb|CAG98707.1| KLLA0F20471p [Kluyveromyces lactis]
Length = 212
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T + Y T G+ + + LD ++LWDT+
Sbjct: 11 KYKIVFLGEQGVGKTSLITRFMYDTFDDNYQATIGIDFLS--KTMYLDDKTIRLQLWDTA 68
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P++ RD H I V++
Sbjct: 69 GQERFRSLIPSYIRDSHVAIVVYD 92
>gi|83315282|ref|XP_730725.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490539|gb|EAA22290.1| Rab5b protein-related [Plasmodium yoelii yoelii]
Length = 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+K+++LG GK+ +A LC ++ + T G + H+ L +T ++ +WDT
Sbjct: 31 KVKVVLLGDSGVGKSSIALYLCHGRFSDSHQVTIGAAFLH--HTIHLKNGETMKLHIWDT 88
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F ++ P + RD +G I V++S
Sbjct: 89 GGQERFRAMAPLYYRDAYGAIVVYDS 114
>gi|348557356|ref|XP_003464485.1| PREDICTED: ras-related protein Rab-12-like [Cavia porcellus]
Length = 248
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 46 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 101
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 102 TAGQERFNSITSAYYRSAKGIILVYD 127
>gi|312082237|ref|XP_003143361.1| RAB-33 protein [Loa loa]
Length = 324
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG GKT L+ C+ + T GV E S A+D ++LWDT+G
Sbjct: 119 KVIILGDAGVGKTCLSFRFCNGRFPAQTEATIGVDFRE--RSVAIDGELIRVQLWDTAGQ 176
Query: 64 HKF-ESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
++ +S+ + R+V+ ++FV++ P L
Sbjct: 177 ERYRQSIVSHYYRNVNAVVFVYDVSNPSSFHSL 209
>gi|91084289|ref|XP_967046.1| PREDICTED: similar to ras-related protein Rab, putative
[Tribolium castaneum]
gi|270008813|gb|EFA05261.1| hypothetical protein TcasGA2_TC015416 [Tribolium castaneum]
Length = 201
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+LI+G GK+ L D T + Y T GV +I + +LD K ++++WDT+
Sbjct: 10 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKI----KTVSLDGQKVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ + R HG+I V++
Sbjct: 66 GQERFRTITSTYYRGTHGVIVVYD 89
>gi|393907258|gb|EFO20709.2| RAB-33 protein [Loa loa]
Length = 326
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG GKT L+ C+ + T GV E S A+D ++LWDT+G
Sbjct: 121 KVIILGDAGVGKTCLSFRFCNGRFPAQTEATIGVDFRE--RSVAIDGELIRVQLWDTAGQ 178
Query: 64 HKF-ESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
++ +S+ + R+V+ ++FV++ P L
Sbjct: 179 ERYRQSIVSHYYRNVNAVVFVYDVSNPSSFHSL 211
>gi|156121229|ref|NP_001095762.1| ras-related protein Rab-12 [Bos taurus]
gi|151554332|gb|AAI49543.1| RAB12 protein [Bos taurus]
Length = 244
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 42 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 97
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 98 TAGQERFNSITSAYYRSAKGIILVYD 123
>gi|106507164|ref|NP_001020471.2| ras-related protein Rab-12 [Homo sapiens]
gi|114672319|ref|XP_001140752.1| PREDICTED: ras-related protein Rab-12 [Pan troglodytes]
gi|122064944|sp|Q6IQ22.3|RAB12_HUMAN RecName: Full=Ras-related protein Rab-12
gi|119622021|gb|EAX01616.1| hCG37212 [Homo sapiens]
gi|307684354|dbj|BAJ20217.1| RAB12, member RAS oncogene family [synthetic construct]
gi|410212514|gb|JAA03476.1| RAB12, member RAS oncogene family [Pan troglodytes]
gi|410255034|gb|JAA15484.1| RAB12, member RAS oncogene family [Pan troglodytes]
Length = 244
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 42 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 99
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYD 123
>gi|383860301|ref|XP_003705629.1| PREDICTED: ras-related protein Rab-23-like [Megachile rotundata]
Length = 240
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ +K++I+G GK+ + C T +Y T GV +E E +D + LWDT
Sbjct: 8 ISLKVVIVGNGAVGKSSMIQRFCKGTYTRDYKKTIGVDFLERE--IEVDGEDVRLMLWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
+G +F+++ A+ R H + +++
Sbjct: 66 AGQEEFDAITAAYYRGAHACVLAYSA 91
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D ++LWDT+G
Sbjct: 6 LKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKE--VMVDDRLVTMQLWDTAG 63
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ L + D F+ Q++ N
Sbjct: 64 QERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQANPQN 111
>gi|148701156|gb|EDL33103.1| RAB1B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 189
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LDGKVIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|328868471|gb|EGG16849.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 207
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTINLDGKIIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
+F ++ ++ R HGII V++ V H+S
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD--VTDHVS 95
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 38 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTVKLQIWD 91
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 92 TAGQERFRTITSSYYRGAHGIIIVYD 117
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 78 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 131
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 132 TAGQERFRTITSSYYRGAHGIIVVYD 157
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK L D T E Y T GV R +E LD ++++WD
Sbjct: 18 KLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 71
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIVVYD 97
>gi|158295454|ref|XP_316217.3| AGAP006159-PA [Anopheles gambiae str. PEST]
gi|157016045|gb|EAA10814.3| AGAP006159-PA [Anopheles gambiae str. PEST]
Length = 242
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++ KI++LG GKT L +E PT G C+ + L+ K ++++WDT
Sbjct: 4 IEAKIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVN--LEDFKVKMQVWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ P + R+ + + VF+
Sbjct: 62 AGQERFKAMAPLYYRNANAALLVFD 86
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 140 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 193
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 194 DTAGQERFRTITSSYYRGAHGIIVVYD 220
>gi|393218947|gb|EJD04435.1| GTP-binding protein SAS1 [Fomitiporia mediterranea MF3/22]
Length = 204
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
IK+L++G GK+ L CD T + T G+ R +E LD + ++++W
Sbjct: 10 IKLLLIGDSGVGKSCLLTRFCDDTWTPSFITTIGIDFKIRTIE------LDGKRIKLQIW 63
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ A+ R GI+ V++
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLVYD 90
>gi|327281978|ref|XP_003225722.1| PREDICTED: ras-related protein Rab-12-like [Anolis carolinensis]
Length = 258
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 56 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 113
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 114 GQERFNSITSAYYRSAKGIILVYD 137
>gi|67474630|ref|XP_653064.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56469981|gb|EAL47675.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790154|dbj|BAD82873.1| small GTPase EhRabX25 [Entamoeba histolytica]
gi|449709397|gb|EMD48672.1| small GTPase EhRabX25, putative [Entamoeba histolytica KU27]
Length = 191
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K +I+G GKT + T EE T G V+CE + S ++ +WDT G
Sbjct: 6 KTVIIGDSGVGKTCIIQRFTKGTFNEEQSATVGASFVDCEFKLPNNES-YKLRIWDTCGQ 64
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
F+S+ P + R+ II VF+
Sbjct: 65 ESFQSIIPMYFRNASCIILVFD 86
>gi|417408868|gb|JAA50968.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 232
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 30 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 87
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 88 GQERFNSITSAYYRSAKGIILVYD 111
>gi|195350702|ref|XP_002041877.1| GM11425 [Drosophila sechellia]
gi|194123682|gb|EDW45725.1| GM11425 [Drosophila sechellia]
Length = 169
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYA-LDTSKTEIELWDTS 61
K+LI+G GK+ L + E Y T G+ I SY L K +E+WDT+
Sbjct: 8 FKVLIVGDTGVGKSSLMMRFTENKFLENYMCTVGMDI---RASYVELLEGKMMLEVWDTT 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
GD + +S P+F HG++ V++
Sbjct: 65 GDERLKSAMPSFYHGAHGVLLVYD 88
>gi|363750482|ref|XP_003645458.1| hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889092|gb|AET38641.1| Hypothetical protein Ecym_3137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 221
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T + Y T G+ + + LD ++LWDT+
Sbjct: 12 KYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLS--KTVYLDDRNIRLQLWDTA 69
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P++ RD H I V++
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYD 93
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSD---LN 109
T+G +F ++ ++ R HGII V++ + V +SE+ D + + S L
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEI----DRYASDSVCKLLV 119
Query: 110 NHKCLLIDNVKPGRGDSSGHAHSL 133
+KC L+D+ ++ A SL
Sbjct: 120 GNKCDLVDSKVVDTEEAKAFAESL 143
>gi|426254019|ref|XP_004020685.1| PREDICTED: ras-related protein Rab-12 [Ovis aries]
Length = 430
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
K++++I+G GKT L D T E T GV + VE L K +++
Sbjct: 228 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE------LRGKKIRLQI 281
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFN 85
WDT+G +F S+ A+ R GII V++
Sbjct: 282 WDTAGQERFNSITSAYYRSAKGIILVYD 309
>gi|1710015|sp|P51152.1|RAB12_CANFA RecName: Full=Ras-related protein Rab-12
gi|437985|emb|CAA80471.1| Rab12 protein [Canis lupus familiaris]
Length = 208
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 6 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 63
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 64 GQERFNSITSAYYRSAKGIILVYD 87
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E ++ +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKE--VLIEDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ V L ++D F+ Q+ ++ K
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVNVNRSFDTLNTWHDEFLNQASPSDPK 117
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQAN 111
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQAN 111
>gi|332374478|gb|AEE62380.1| unknown [Dendroctonus ponderosae]
Length = 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG + AGKT L N C Y T GV E E +++ + +++WDT+G
Sbjct: 56 KVIILGDVAAGKTCLVNRCCRNFFESTYKSTIGVDF-EVEK-FSILSVPFVLQIWDTAGQ 113
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+S+ ++ R + I+ VF+
Sbjct: 114 ERFKSIVQSYYRGANVILIVFD 135
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTVKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYD 89
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTS 61
+K++ILG GKT L + +++Y T G + E +D +K+ +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSQQYKATIGADFLTKE--IPIDNNKSVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + F+ ++ L + D F+ Q +++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQLNVSN 115
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQAN 111
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|431896332|gb|ELK05748.1| Ras-related protein Rab-12 [Pteropus alecto]
Length = 246
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 44 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 101
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 102 GQERFNSITSAYYRSAKGIILVYD 125
>gi|242020978|ref|XP_002430924.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516142|gb|EEB18186.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRI-VECE-HSYALDTSKTEIELWDT 60
+KILI+G GK+ L D +++ P Q + I V+ + +D ++ ++ LWDT
Sbjct: 9 LKILIIGESGVGKSSLLLRFID----DKFDPDQPLTIGVDFKTKEMTVDGNRVKLALWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F ++ P++ RD HG I V++
Sbjct: 65 AGQERFRTLIPSYYRDAHGAILVYD 89
>gi|170037970|ref|XP_001846827.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
gi|167881359|gb|EDS44742.1| low-Mr GTP-binding protein Rab31 [Culex quinquefasciatus]
Length = 240
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++ KI++LG GKT L +E PT G C+ + L+ K ++++WDT
Sbjct: 4 IEAKIVVLGSQGVGKTSLVVRYVSNVYTKEVSPTIGASFFTCKVN--LEDFKVKMQVWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ P + R+ + + VF+
Sbjct: 62 AGQERFKAMAPLYYRNANAALLVFD 86
>gi|47223036|emb|CAG07123.1| unnamed protein product [Tetraodon nigroviridis]
Length = 244
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++I+I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 42 KLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 97
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GI+ V++
Sbjct: 98 TAGQERFNSITSAYYRGAKGIVLVYD 123
>gi|167382616|ref|XP_001736187.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901348|gb|EDR27431.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 2/123 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT + C+ T E Y T GV + T K +++WDT+G
Sbjct: 11 KILIVGDSGVGKTAILQRYCNNTFDERYVSTIGVDFKPMILNLGERTVK--LQIWDTAGQ 68
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNVKPGR 123
+F ++ A+ R+ +I V++ +S++ +Y ++ N L+ N K
Sbjct: 69 ERFMNITAAYFRNTTAVIIVYDVNNRESLSKVYSWYGEVNEKTTQPNPVIFLVGNKKDEN 128
Query: 124 GDS 126
DS
Sbjct: 129 SDS 131
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T +Y T GV +I E LD ++++WDT+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVE----LDGKTVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ ++ R HGII V++
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYD 89
>gi|395857340|ref|XP_003801056.1| PREDICTED: ras-related protein Rab-12 [Otolemur garnettii]
Length = 234
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 32 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 89
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 90 GQERFNSITSAYYRSAKGIILVYD 113
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTINLDGKIIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
+F ++ ++ R HGII V++ V H+S
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD--VTDHVS 95
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + E S +D +K +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIS--IDGNKQVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + ++ ++ L + D F+ QS+++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLTSWKDEFLVQSNVSN 115
>gi|73913048|gb|AAZ91462.1| RAB7 [Hordeum vulgare]
Length = 184
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N + +++Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKE--VLIEDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHK 112
+F+S+ AF R + V++ + L ++D F+ Q+ ++ K
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDPK 116
>gi|123501229|ref|XP_001328023.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736248|gb|AAX97453.1| small Rab GTPase Rab7a [Trichomonas vaginalis]
gi|121910961|gb|EAY15800.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+L+LG GKT L N + Y T G +D +++WDT+G
Sbjct: 9 LKLLLLGDASVGKTSLLNQFVNREFTSSYKATIGSDF--SSKQLDVDGHYVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ P F R I V++ P + + + F Q L+N
Sbjct: 67 QERFQSLGPTFYRGTDCCILVYDVTKPASFENIKKWRNEFSLQLGLSN 114
>gi|296473716|tpg|DAA15831.1| TPA: RAB12, member RAS oncogene family [Bos taurus]
Length = 168
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 42 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 97
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 98 TAGQERFNSITSAYYRSAKGIILVYD 123
>gi|167382002|ref|XP_001735936.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901842|gb|EDR27829.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT + C+ E T GV + ++ K +++LWDT+G
Sbjct: 14 KILIIGESGVGKTAILERYCENIFNESLLSTVGVDFKS--KYFTIEGKKIKVQLWDTAGQ 71
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
KF ++ ++ R HG I ++
Sbjct: 72 EKFRNITTSYYRGTHGCIITYD 93
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 24/144 (16%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R +E LD ++++WD
Sbjct: 9 KLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIE------LDGKTVKLQIWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSD---LN 109
T+G +F ++ ++ R HGII V++ + V +SE+ D + + S L
Sbjct: 63 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEI----DRYASDSVCKLLV 118
Query: 110 NHKCLLIDNVKPGRGDSSGHAHSL 133
+KC L+D+ ++ A SL
Sbjct: 119 GNKCDLVDSKVVDTEEAKAFAESL 142
>gi|260812171|ref|XP_002600794.1| hypothetical protein BRAFLDRAFT_95080 [Branchiostoma floridae]
gi|260812173|ref|XP_002600795.1| hypothetical protein BRAFLDRAFT_95082 [Branchiostoma floridae]
gi|229286084|gb|EEN56806.1| hypothetical protein BRAFLDRAFT_95080 [Branchiostoma floridae]
gi|229286085|gb|EEN56807.1| hypothetical protein BRAFLDRAFT_95082 [Branchiostoma floridae]
Length = 231
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C ++ T GV E + +DT +++LWDT+G
Sbjct: 27 KIIVIGDSNVGKTCLTFRFCGGKFPDKTEATIGVDFRE--RTLEIDTETIKLQLWDTAGQ 84
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 85 ERFRKSMVQHYYRNVHAVVFVYD 107
>gi|118138456|pdb|2IL1|A Chain A, Crystal Structure Of A Predicted Human Gtpase In Complex
With Gdp
Length = 192
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 26 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 81
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 82 TAGQERFNSITSAYYRSAKGIILVYD 107
>gi|308321783|gb|ADO28034.1| ras-related protein rab-7a [Ictalurus furcatus]
Length = 207
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E ++ +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKE--VMVEDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ AF R + VF+ P L D F+ Q+ D +N L++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSGRDEFLIQASPRDPDNFPFLVLGN 125
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI+ V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVVVYD 89
>gi|402588319|gb|EJW82252.1| hypothetical protein WUBG_06837 [Wuchereria bancrofti]
Length = 325
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++ILG GKT L+ C+ + T GV E S A+D ++LWDT+G
Sbjct: 120 KVIILGNAGVGKTCLSFRFCNGRFPAQTEATIGVDFRE--RSVAIDGELIRVQLWDTAGQ 177
Query: 64 HKF-ESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
++ +S+ + R+V+ ++FV++ P L
Sbjct: 178 ERYRQSIVSHYYRNVNAVVFVYDVSNPSSFHSL 210
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + LD +K +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLT--KDITLDNNKQVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + ++ ++ L + D F+ QS+++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLVQSNVSN 115
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 62
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|410989028|ref|XP_004000771.1| PREDICTED: ADP-ribosylation factor-like protein 13A [Felis catus]
Length = 266
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+ I+I+G +GKTVL A L + + + H Y E+ ++D SG
Sbjct: 22 VTIIIIGLDNSGKTVLVEAFQRLLPSRMNNCMKSELTTLLLHEY-------EVSIYDLSG 74
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
D K + WP + HG++FV +S G + E+ + ++ + LL+ N
Sbjct: 75 DMKGQETWPNYYAQAHGLVFVLDSSDLGRMQEVKIILTRLLSDKRVAGISILLMAN 130
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYCRGAHGIIVVYD 89
>gi|1370182|emb|CAA98168.1| RAB7A [Lotus japonicus]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQAN 111
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|351710944|gb|EHB13863.1| Ras-related protein Rab-7b, partial [Heterocephalus glaber]
Length = 174
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++I+G + GKT L + T EEY T G I+ LD + ++++WDT
Sbjct: 7 MDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILS--KVIILDDTTLKLQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ F + G I F+
Sbjct: 65 GGQERFRSMVSTFYKGSDGCILAFD 89
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTINLDGKIIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHIS 93
+F ++ ++ R HGII V++ V H+S
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD--VTDHVS 95
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 687 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 740
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 741 DTAGQERFRTITSSYYRGAHGIIVVYD 767
>gi|432096068|gb|ELK26936.1| Ras-related protein Rab-34 [Myotis davidii]
Length = 582
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 47 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGIPFS-LQLWDTAGQ 104
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 105 ERFKCIASTYYRGAQAIIIVFN 126
>gi|118359794|ref|XP_001013135.1| Ras family protein [Tetrahymena thermophila]
gi|89294902|gb|EAR92890.1| Ras family protein [Tetrahymena thermophila SB210]
gi|307777828|dbj|BAJ21310.1| Rab-family small GTPase RabX4 [Tetrahymena thermophila]
Length = 215
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQ-------GVRIVECEHSYALDTSKTE 54
K+K+LILG GKT L N E+ PT ++++E +D K +
Sbjct: 7 KVKLLILGESSVGKTALLNRFAQ----NEFIPTSSSTGMDYAIKMIE------IDNKKVQ 56
Query: 55 IELWDTSGDHKFESVWPAFQRDVHGIIFVFN 85
+ +WDT+G ++ S+ +D GI+ VF+
Sbjct: 57 LSVWDTAGQERYRSITFNLYKDSQGILLVFD 87
>gi|304606|gb|AAC37384.1| RabC [Dictyostelium discoideum]
gi|739978|prf||2004272E rabC gene
Length = 196
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTSG 62
KI+++G GK+ + D T ++ + PT GV + +T +T +++LWDT+G
Sbjct: 8 KIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDF-NVKTIRNKETGQTVKLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+F+S+ F R HG+I V++ P L
Sbjct: 67 QERFKSITQTFYRGSHGVIVVYDVTDPKSFERL 99
>gi|385301293|gb|EIF45495.1| gtpase rab7 [Dekkera bruxellensis AWRI1499]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L + +++Y T G + + + +D + +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDMN--IDDKQVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + VF+ L + D F+ Q+++ +
Sbjct: 67 QERFQSLGVAFYRGSDCCVLVFDVTNSKSFENLQNWRDEFLIQANIKD 114
>gi|26348325|dbj|BAC37802.1| unnamed protein product [Mus musculus]
gi|404516955|gb|AFR77764.1| Rab7b [Mus musculus]
Length = 157
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 67 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 104
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T +Y T GV +I E LD ++++WDT+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVE----LDGKTVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ ++ R HGII V++
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYD 89
>gi|148234845|ref|NP_001084894.1| Rho family GTPase 3 [Xenopus laevis]
gi|47123149|gb|AAH70797.1| MGC83857 protein [Xenopus laevis]
Length = 244
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDSFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNRYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQAN 111
>gi|30841008|ref|NP_851415.1| ras-related protein Rab-18 [Mus musculus]
gi|1710017|sp|P35293.2|RAB18_MOUSE RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|388325|gb|AAC37632.1| Rab18 [Mus musculus]
gi|515041|emb|CAA56583.1| rab18 [Mus musculus]
gi|26337433|dbj|BAC32402.1| unnamed protein product [Mus musculus]
gi|33604086|gb|AAH56351.1| RAB18, member RAS oncogene family [Mus musculus]
gi|74138639|dbj|BAE27140.1| unnamed protein product [Mus musculus]
gi|74150708|dbj|BAE25489.1| unnamed protein product [Mus musculus]
gi|74183892|dbj|BAE24512.1| unnamed protein product [Mus musculus]
gi|74191971|dbj|BAE32926.1| unnamed protein product [Mus musculus]
gi|74222309|dbj|BAE26955.1| unnamed protein product [Mus musculus]
gi|112292993|dbj|BAF02874.1| Rab18 [Mus musculus]
gi|148691081|gb|EDL23028.1| RAB18, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 206
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|326917471|ref|XP_003205022.1| PREDICTED: ras-related protein Rab-12-like [Meleagris gallopavo]
Length = 262
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++++I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 60 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 117
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GII V++
Sbjct: 118 GQERFNSITSAYYRSAKGIILVYD 141
>gi|52345748|ref|NP_001004920.1| Rho family GTPase 3 [Xenopus (Silurana) tropicalis]
gi|49523003|gb|AAH75375.1| Rho family GTPase 3 [Xenopus (Silurana) tropicalis]
Length = 244
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDSFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|74831371|emb|CAI39291.1| rab_C69 [Paramecium tetraurelia]
Length = 221
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KI+ LG GKT + N D T E PT G+ + + +D ++LWD
Sbjct: 11 QKYKIVFLGDQAVGKTSIINRFIFDNFTGNE-QPTVGIDFIS--KTLQVDNKSVRLQLWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ P++ RD I F+
Sbjct: 68 TAGQERFRSLIPSYIRDSQAAIICFD 93
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|147901964|ref|NP_001084554.1| uncharacterized protein LOC414503 [Xenopus laevis]
gi|46250165|gb|AAH68920.1| MGC83149 protein [Xenopus laevis]
Length = 244
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDSFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|67465441|ref|XP_648905.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465210|gb|EAL43520.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790166|dbj|BAD82879.1| small GTPase EhRabX31 [Entamoeba histolytica]
gi|449702784|gb|EMD43354.1| small GTPase EhRabX31, putative [Entamoeba histolytica KU27]
Length = 193
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
K KI+++G GKT + L +++PT G ++E E+ SK E+ L
Sbjct: 5 KHKIVMVGDFSTGKTCMLIRLSQNFFDTQHNPTIGASFLKEVIELENG-----SKVEMNL 59
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFN 85
WDTSGD +F SV P + R I V++
Sbjct: 60 WDTSGDERFRSVMPVYFRGADCAIIVYD 87
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 21 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 74
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 75 TAGQERFRTITSSYYRGAHGIIVVYD 100
>gi|45201353|ref|NP_986923.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|44986287|gb|AAS54747.1| AGR257Cp [Ashbya gossypii ATCC 10895]
gi|374110173|gb|AEY99078.1| FAGR257Cp [Ashbya gossypii FDAG1]
Length = 220
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T + Y T G+ + + LD ++LWDT+
Sbjct: 12 KYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLS--KTVYLDDRTIRLQLWDTA 69
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P++ RD H I V++
Sbjct: 70 GQERFRSLIPSYIRDSHVAIVVYD 93
>gi|351712339|gb|EHB15258.1| Ras-related protein Rab-18 [Heterocephalus glaber]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+ ILG GKT L N + + +Y T G + E + +++WDT+G
Sbjct: 290 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKE--IVFEDKLVTLQIWDTAG 347
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R I V++ P +L + D F+ Q+
Sbjct: 348 QERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQA 391
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T +E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD 89
>gi|66472490|ref|NP_001018466.1| ras-related protein Rab-12 [Danio rerio]
gi|63100845|gb|AAH95608.1| Zgc:111945 [Danio rerio]
gi|182889626|gb|AAI65429.1| Zgc:111945 protein [Danio rerio]
Length = 235
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 35 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 90
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GI+ V++
Sbjct: 91 TAGQERFNSITSAYYRGAKGIVLVYD 116
>gi|56544494|gb|AAV92912.1| Rab GTPase [Drosophila mauritiana]
Length = 204
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYA-LDTSKTEIELWDTS 61
K+LI+G GK+ L + E Y T + I SY L K +E+WDT+
Sbjct: 6 FKVLIVGDTGVGKSSLMMRFTENKFLENYVCTVSMDI---RASYVELLEGKMMLEVWDTT 62
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNS 86
GD + +S P+F R HG++ V+++
Sbjct: 63 GDERLKSAMPSFYRGAHGVLLVYDT 87
>gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
gi|88183147|gb|EAQ90615.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
Length = 205
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VMVDDRRVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQA 110
>gi|387016282|gb|AFJ50260.1| rho-related GTP-binding protein RhoE-like [Crotalus adamanteus]
Length = 244
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDTQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|346467497|gb|AEO33593.1| hypothetical protein [Amblyomma maculatum]
Length = 229
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
M +K++ILG GKT L N + + +Y T G ++ E + + +++WDT
Sbjct: 31 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADLLTKEVQF--EDRLFTLQIWDT 88
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLID 117
+G +F+S+ AF R + V++ V L + + F+ Q SD +N +++
Sbjct: 89 AGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPDNFPFVVLG 148
Query: 118 N 118
N
Sbjct: 149 N 149
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYD 90
>gi|432880281|ref|XP_004073640.1| PREDICTED: ras-related protein Rab-33B-like [Oryzias latipes]
Length = 235
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
KI+++G GKT L C ++ T GV R+VE +D K +I+LW
Sbjct: 25 FKIIVIGDSGVGKTCLTYRFCAGRFPDKTEATIGVDFRERLVE------IDGEKIKIQLW 78
Query: 59 DTSGDHKF-ESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNN 110
DT+G +F +S+ + R+VH ++FV++ +P I E L
Sbjct: 79 DTAGQERFRKSMVQHYYRNVHAVVFVYDLTNAASFRSLPAWIEECKQHSLGTEVPRILVG 138
Query: 111 HKCLLIDNVKPG 122
+KC L D+V+ G
Sbjct: 139 NKCDLQDSVQVG 150
>gi|297734623|emb|CBI16674.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KIL++G GK+ L D T +E Y T GV C S D ++++WDT+G
Sbjct: 12 KILLVGDSGVGKSCLLLRYADDTYSEAYISTIGVDFKIC--SMERDGRNLKLQIWDTAGQ 69
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HG++ V++
Sbjct: 70 ERFRALTCSYYRGAHGVMVVYD 91
>gi|167382932|ref|XP_001736335.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901506|gb|EDR27589.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT + LC+ T Y T GV + ++++WDT+G
Sbjct: 12 KILIIGESGVGKTAIMQRLCEDTYDNVYISTVGVDFKP--KILNIRNKTVKMQIWDTAGQ 69
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F ++ ++ R+ G+I V++ G + ++ +++ ++ N L+ N
Sbjct: 70 ERFRNITASYYRNAQGVIIVYDVNDIGTLEKVDSWFNEVKERTGANPPVVFLVGN 124
>gi|71745492|ref|XP_827376.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70831541|gb|EAN77046.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74834804|emb|CAJ30027.1| rab7 homologue [Trypanosoma brucei brucei]
gi|261331581|emb|CBH14575.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 220
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L + + Y T G + +D +++WDT+G
Sbjct: 8 LKIIILGDSGVGKTALVHQYVNKNFDNRYKATIGADFLT--RDVEIDGKLVTLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F+S+ AF R + VF+ S + + + F Q+ +C+LI N
Sbjct: 66 QERFQSLGSAFYRGADACVLVFDLTDSESFSHINSWLEEFRAQA--GQRECVLIGN 119
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI+ V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIMVVYD 92
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|387017928|gb|AFJ51082.1| ras-related protein Rab-18-like [Crotalus adamanteus]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDNTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|348565773|ref|XP_003468677.1| PREDICTED: ras-related protein Rab-18-like [Cavia porcellus]
Length = 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+ ILG GKT L N + + +Y T G + E + +++WDT+G
Sbjct: 312 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKE--IVFEDKLVTLQIWDTAG 369
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R I V++ P +L + D F+ Q+
Sbjct: 370 QERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQA 413
>gi|145549235|ref|XP_001460297.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428126|emb|CAK92900.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 1 MKIKILILGPIMAGKTVLANALC-DLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWD 59
K KI+ LG GKT + N D T E PT G+ + + +D ++LWD
Sbjct: 11 QKYKIVFLGDQAVGKTSIINRFIFDNFTGNE-QPTVGIDFIS--KTLQVDNKSVRLQLWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ P++ RD I F+
Sbjct: 68 TAGQERFRSLIPSYIRDSQAAIICFD 93
>gi|21704002|ref|NP_663484.1| ras-related protein Rab-7b [Mus musculus]
gi|50401091|sp|Q8VEA8.1|RAB7B_MOUSE RecName: Full=Ras-related protein Rab-7b
gi|26326669|dbj|BAC27078.1| unnamed protein product [Mus musculus]
gi|112293051|dbj|BAF02903.1| Rab42 [Mus musculus]
gi|148707757|gb|EDL39704.1| RIKEN cDNA 5430435G22, isoform CRA_c [Mus musculus]
Length = 199
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 67 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 104
>gi|70942937|ref|XP_741574.1| Rab5B protein [Plasmodium chabaudi chabaudi]
gi|56520042|emb|CAH81941.1| Rab5B protein, putative [Plasmodium chabaudi chabaudi]
Length = 154
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDT 60
K+K+++LG GK+ +A LC ++ + T G + H+ L +T ++ +WDT
Sbjct: 31 KVKVVLLGDSGVGKSSIALYLCHGRFSDSHQVTIGAAFLH--HTIHLKNGETMKLHIWDT 88
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNS 86
G +F ++ P + RD +G + V++S
Sbjct: 89 GGQERFRAMAPLYYRDAYGAVVVYDS 114
>gi|354473456|ref|XP_003498951.1| PREDICTED: ras-related protein Rab-18-like [Cricetulus griseus]
gi|344249075|gb|EGW05179.1| Ras-related protein Rab-18 [Cricetulus griseus]
Length = 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+ ILG GKT L N + + +Y T G + E + +++WDT+G
Sbjct: 309 LKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKE--IVFEDKLVTLQIWDTAG 366
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R I V++ P +L + D F+ Q+
Sbjct: 367 QERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQA 410
>gi|157128524|ref|XP_001661468.1| low-Mr GTP-binding protein Rab31, putative [Aedes aegypti]
gi|108872544|gb|EAT36769.1| AAEL011171-PA [Aedes aegypti]
Length = 242
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++ KI++LG GKT L +E PT G C+ + L+ K ++++WDT
Sbjct: 4 IEAKIVVLGSQGVGKTSLVVRYVSNVYTKEISPTIGASFFTCKVN--LEDFKVKMQVWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+++ P + R+ + + VF+
Sbjct: 62 AGQERFKAMAPLYYRNANAALLVFD 86
>gi|148224120|ref|NP_001079868.1| uncharacterized protein LOC379558 [Xenopus laevis]
gi|33416686|gb|AAH56054.1| MGC69017 protein [Xenopus laevis]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|26331122|dbj|BAC29291.1| unnamed protein product [Mus musculus]
Length = 157
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 67 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 104
>gi|60223069|ref|NP_001012486.1| ras-related protein Rab-18 [Rattus norvegicus]
gi|81909560|sp|Q5EB77.1|RAB18_RAT RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|59808259|gb|AAH89957.1| RAB18, member RAS oncogene family [Rattus norvegicus]
Length = 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|403333129|gb|EJY65638.1| hypothetical protein OXYTRI_14207 [Oxytricha trifallax]
Length = 267
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
+ KI+I+G GKT L + + E+Y T GV + K +++WDT+
Sbjct: 46 QFKIIIIGDPCCGKTSLLMRIAENKRNEQYEMTVGVDCKSRTFLHEKTGQKVRLQIWDTA 105
Query: 62 GDHKFESVWPAFQRDVHGIIFVF---NSGVPGHISELLLFYDYF 102
G +F S+ ++ R H I VF NS H+ + + Y+Y+
Sbjct: 106 GQDRFTSITTSYYRGTHCAILVFDITNSESFFHLFKWIDQYNYY 149
>gi|390463346|ref|XP_003733017.1| PREDICTED: ras-related protein Rab-34 [Callithrix jacchus]
gi|390463348|ref|XP_002748284.2| PREDICTED: ras-related protein Rab-34 isoform 1 [Callithrix
jacchus]
Length = 259
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C + Y T GV E E L + ++LWDT+G
Sbjct: 54 KVIVVGDLSVGKTCLINRFCKDIFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 111
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R II VFN
Sbjct: 112 ERFKCIASTYYRGAQAIIIVFN 133
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTLDLDGKTIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYD 89
>gi|255712777|ref|XP_002552671.1| KLTH0C10384p [Lachancea thermotolerans]
gi|238934050|emb|CAR22233.1| KLTH0C10384p [Lachancea thermotolerans CBS 6340]
Length = 234
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K KI+ LG GKT L T + Y T G+ + + LD ++LWDT+
Sbjct: 33 KYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLS--KTMYLDDKTIRLQLWDTA 90
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ P++ RD H I V++
Sbjct: 91 GQERFRSLIPSYIRDSHVAIVVYD 114
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + Y T GV R VE LD ++++WD
Sbjct: 11 KLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVE------LDGKSVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHK 112
T+G +F ++ ++ R HGII V++ + V +SE+ + V + + N K
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGN-K 123
Query: 113 CLLIDNVKPGRGDSSGHAHSL 133
C L+D+ ++ A SL
Sbjct: 124 CDLVDSKVVDTEEAKALADSL 144
>gi|62822466|gb|AAY15014.1| unknown [Homo sapiens]
Length = 116
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT---ASFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LEAKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI VF+
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVFD 89
>gi|225453364|ref|XP_002272294.1| PREDICTED: GTP-binding protein YPTM2-like [Vitis vinifera]
Length = 203
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KIL++G GK+ L D T +E Y T GV C S D ++++WDT+G
Sbjct: 10 KILLVGDSGVGKSCLLLRYADDTYSEAYISTIGVDFKIC--SMERDGRNLKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HG++ V++
Sbjct: 68 ERFRALTCSYYRGAHGVMVVYD 89
>gi|403265469|ref|XP_003924959.1| PREDICTED: ras-related protein Rab-12 [Saimiri boliviensis
boliviensis]
Length = 263
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++++I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 61 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 116
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GII V++
Sbjct: 117 TAGQERFNSITSAYYRSAKGIILVYD 142
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 19 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKVIKLQIWD 72
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 73 TAGQERFRTITSSYYRGAHGIIVVYD 98
>gi|348521982|ref|XP_003448505.1| PREDICTED: ras-related protein Rab-12-like [Oreochromis niloticus]
Length = 243
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++I+I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 43 KLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 98
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GI+ V++
Sbjct: 99 TAGQERFNSITSAYYRGAKGIVLVYD 124
>gi|126341216|ref|XP_001367066.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis
domestica]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|395539893|ref|XP_003771898.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Sarcophilus
harrisii]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1
[Strongylocentrotus purpuratus]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKVIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 203
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + E Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|403367106|gb|EJY83362.1| GTP-binding protein ypt2 [Oxytricha trifallax]
Length = 174
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDT 60
IK++I+G GK+ L CD E+Y T GV +I E ++ + ++++WDT
Sbjct: 10 IKLIIVGHEKVGKSSLMLRYCDNEFTEQYLATIGVDFKIKALE----VNGRQVKLQIWDT 65
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F+S+ A+ R G++ V++
Sbjct: 66 AGQERFQSITTAYYRGASGMMIVYD 90
>gi|154422536|ref|XP_001584280.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918526|gb|EAY23294.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 189
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ K++++G + GKT +AN L ++Y PT G + + + + E+++WDT
Sbjct: 7 FEFKVVMIGAVAVGKTSIANRLQFQVFEDDYQPTIGAGYIPYKTEF--NGKLVELQIWDT 64
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G K++S+ + RD + I V++
Sbjct: 65 AGMEKYKSLGSIYYRDSNAAILVYD 89
>gi|402593378|gb|EJW87305.1| hypothetical protein WUBG_01787 [Wuchereria bancrofti]
Length = 229
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
+ +++++G GK+ L + AE PT GV R+VE + Y + +++L
Sbjct: 20 QFRVILIGDSTVGKSSLLRHFTEGKCAEICDPTVGVDFYARMVEVKPGY-----RIKLQL 74
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVF---NSGVPGHISELL 96
WDT+G KF S+ ++ R+ G+I V+ N H+S+ L
Sbjct: 75 WDTAGQEKFRSITRSYYRNSVGVIVVYDITNRSTFDHVSQWL 116
>gi|327271994|ref|XP_003220771.1| PREDICTED: ras-related protein Rab-18-like [Anolis carolinensis]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T +Y T GV +I E LD ++++WDT+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVE----LDGKTVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ ++ R HGII V++
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYD 89
>gi|149016250|gb|EDL75496.1| rCG62892 [Rattus norvegicus]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGKSGVGKSSLLLRFTDNTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T +Y T GV +I E LD ++++WDT+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVE----LDGKTVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ ++ R HGII V++
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYD 89
>gi|407038794|gb|EKE39311.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT + LC+ T Y T GV + ++++WDT+G
Sbjct: 12 KILIIGESGVGKTAIMQRLCEDTYDNVYISTVGVDFKP--KILNIRNKTVKMQIWDTAGQ 69
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F ++ ++ R+ G+I V++ G + ++ +++ ++ N L+ N
Sbjct: 70 ERFRNITASYYRNAQGVIIVYDVNDIGTLEKVDSWFNEVKERTGANPPVVFLVGN 124
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVF---NSGVPGHISELLLFYDYFVTQ----------S 106
T+G +F ++ ++ R HGII V+ ++ ++ + L D F ++ S
Sbjct: 65 TAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRFASEGVNKLLVGNKS 124
Query: 107 DLNNHKCL 114
DL N K +
Sbjct: 125 DLTNKKVV 132
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+LI+G GK+ L + T E T GV + A+D +K ++ +WDT+G
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKV--KTLAIDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F ++ P++ R G+I V++ ++L + + T + N+ +L+ N
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYTTRNDIVKMLVGN 122
>gi|302672637|ref|XP_003026006.1| hypothetical protein SCHCODRAFT_36505 [Schizophyllum commune H4-8]
gi|300099686|gb|EFI91103.1| hypothetical protein SCHCODRAFT_36505 [Schizophyllum commune H4-8]
Length = 135
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVE--CEHSYALDTSKTEIELWDT 60
IK++I+GP GKT L + Y T G + H D S +++WDT
Sbjct: 8 IKLVIIGPSGVGKTSLRGQYISGRFSAGYRATIGADFITKTLPHPSRPDESVV-LQIWDT 66
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYF-----VTQSDLNNHKCLL 115
+G +F S+ AF R + F++ + L ++D F V DL + C++
Sbjct: 67 AGQERFSSLSSAFFRGADAAVLCFDANDRQSMRSLTKWWDEFKQRTPVADEDLEEYCCVV 126
Query: 116 IDN 118
+ N
Sbjct: 127 VGN 129
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T + Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHK 112
T+G +F ++ ++ R HGII V++ S V +SE+ + V + + N K
Sbjct: 64 TAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNKLLVGN-K 122
Query: 113 CLLIDNVKPGRGDSSGHAHSL 133
C L + R + A SL
Sbjct: 123 CDLTSKKQVDRSTAEEFAKSL 143
>gi|444706400|gb|ELW47742.1| Solute carrier family 26 member 9 [Tupaia chinensis]
Length = 1191
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILS--KIIMLDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F SV F + G I F+
Sbjct: 67 QERFRSVVSTFYKGSDGCILAFD 89
>gi|449667272|ref|XP_004206527.1| PREDICTED: ras-related protein RABE1a-like, partial [Hydra
magnipapillata]
Length = 162
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KIL+LG GKT +A D + E Y T G+ + ++ K +++WDT+G
Sbjct: 11 KILVLGQSNVGKTSIAYRFTDDSFKESYISTIGIDATT--STLTIEGEKIRLQIWDTAGQ 68
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ A+ R GI+ V++
Sbjct: 69 ERFRTLTNAYYRGAMGIMLVYD 90
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|291401957|ref|XP_002717338.1| PREDICTED: RAB18, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 206
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|410896420|ref|XP_003961697.1| PREDICTED: ras-related protein Rab-33B-like [Takifugu rubripes]
Length = 234
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
KI+++G GKT L C T E T GV E S LD ++++WDT+G
Sbjct: 37 FKIIVIGDSNVGKTCLTYRFCGGTFLENPEATIGVDFRE--RSLELDGVNIKLQIWDTAG 94
Query: 63 DHKF-ESVWPAFQRDVHGIIFVFN 85
+F S+ + R VH +IFV++
Sbjct: 95 QERFRRSMVEHYYRSVHAVIFVYD 118
>gi|73984375|ref|XP_541037.2| PREDICTED: rho-related GTP-binding protein RhoE [Canis lupus
familiaris]
gi|291391550|ref|XP_002712202.1| PREDICTED: ras homolog gene family, member E [Oryctolagus
cuniculus]
Length = 244
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDVSRPETLDSVL 114
>gi|47214119|emb|CAG00684.1| unnamed protein product [Tetraodon nigroviridis]
Length = 215
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C E+ T GV E +D K +I+LWDT+G
Sbjct: 28 KIIVIGDSGVGKTCLTYRFCAGKFPEKTEATIGVDFRE--RLVDIDGEKIKIQLWDTAGQ 85
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLNNHKCLL 115
+F +S+ + R+VH ++FV++ +P I E L +KC L
Sbjct: 86 ERFRKSMVQHYYRNVHAVVFVYDVTNAASFRSLPAWIEECKQHALGTEVPRILVGNKCDL 145
Query: 116 IDNVKPG 122
D+++ G
Sbjct: 146 QDSIQVG 152
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 9 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTIKLQIWD 62
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 63 TAGQERFRTITSSYYRGAHGIIVVYD 88
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|66811460|ref|XP_639910.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897037|sp|Q54P07.1|RB32D_DICDI RecName: Full=Ras-related protein Rab-32D
gi|60466945|gb|EAL64989.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 228
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++K++++G + GKT + + L EEY T G + ++ + T I+LWDT+
Sbjct: 9 QLKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLS--KTFYQNDIITHIQLWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
G K+ + AF R +I VF+ L +Y F ++S
Sbjct: 67 GQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKS 111
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|432911398|ref|XP_004078660.1| PREDICTED: ras-related protein Rab-12-like [Oryzias latipes]
Length = 242
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
K++I+I+G GKT L D T E T GV + L K +++WDT+
Sbjct: 42 KLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKI--KTVELRGKKIRLQIWDTA 99
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F S+ A+ R GI+ V++
Sbjct: 100 GQERFNSITSAYYRGAKGIVLVYD 123
>gi|163846810|ref|YP_001634854.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222524631|ref|YP_002569102.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
gi|163668099|gb|ABY34465.1| small GTP-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222448510|gb|ACM52776.1| small GTP-binding protein [Chloroflexus sp. Y-400-fl]
Length = 172
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+ KI +LG GKT L + E Y T GV+I H+ +D ++ + +WDT
Sbjct: 4 LTAKICLLGEFSVGKTSLIRRFVEGVFDERYLSTLGVKI--NRHTLHIDQTEINLIIWDT 61
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISEL 95
+G KF+ V + R G I V + P +S L
Sbjct: 62 AGGEKFDQVVQNYYRGAAGAILVCDVTRPETLSAL 96
>gi|442757309|gb|JAA70813.1| Putative ras-related protein rab-18 [Ixodes ricinus]
Length = 125
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDF--KVKTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|145484934|ref|XP_001428476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834397|emb|CAI44534.1| rab_B29 [Paramecium tetraurelia]
gi|124395562|emb|CAK61078.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K++I+G GK+ L D T ++ Y T GV R E +D K ++++WDT+
Sbjct: 10 KLVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGVDFRFKTLE----IDGKKVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
G +F ++ A+ + GI+ V++ G ++ F+ V N + LL+ N
Sbjct: 66 GQERFRTITSAYYKGADGIVMVYDVTSTGSFEDIDRFWINEVESYAEKNVELLLLGN 122
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD +++ W
Sbjct: 60 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQRW 113
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 114 DTAGQERFRTITSSYYRGAHGIIVVYD 140
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii
H99]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|319107425|ref|NP_001188131.1| rho-related gtp-binding protein rhoe [Ictalurus punctatus]
gi|308323065|gb|ADO28670.1| rho-related gtp-binding protein rhoe [Ictalurus punctatus]
Length = 244
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +D+ + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDSQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D +I F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVIICFDVSRPETLDSVL 114
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|67482011|ref|XP_656355.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537431|dbj|BAB40670.1| small GTPase RabC1 [Entamoeba histolytica]
gi|56473553|gb|EAL50972.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449704632|gb|EMD44839.1| small GTPase RabC1, putative [Entamoeba histolytica KU27]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KILI+G GKT + LC+ T Y T GV + ++++WDT+G
Sbjct: 12 KILIIGESGVGKTAIMQRLCEDTYDNVYISTVGVDFKP--KILNIRNKTVKMQIWDTAGQ 69
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F ++ ++ R+ G+I V++ G + ++ +++ ++ N L+ N
Sbjct: 70 ERFRNITASYYRNAQGVIIVYDVNDIGTLEKVDSWFNEVKERTGANPPVVFLVGN 124
>gi|449491738|ref|XP_004158989.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E LD +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKE--VQLDDRLFTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + V++ V L + + F+ Q SD N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGN 125
>gi|49457029|emb|CAG46835.1| ARHE [Homo sapiens]
gi|60822681|gb|AAX36617.1| ras-like gene family member E [synthetic construct]
Length = 229
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 7 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 64 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 99
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|157818725|ref|NP_001102798.1| ras-related protein Rab-7b [Rattus norvegicus]
gi|149058662|gb|EDM09819.1| similar to RAB7-like protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 199
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 9 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 67 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 104
>gi|22219411|pdb|1M7B|A Chain A, Crystal Structure Of Rnd3RHOE: FUNCTIONAL IMPLICATIONS
Length = 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 6 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 62
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 63 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 98
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELW 58
K+L++G GK+ L D T E Y T GV R +E LD ++++W
Sbjct: 49 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIW 102
Query: 59 DTSGDHKFESVWPAFQRDVHGIIFVFN 85
DT+G +F ++ ++ R HGII V++
Sbjct: 103 DTAGQERFRTITSSYYRGAHGIIVVYD 129
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 72
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYD 94
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSD 107
+F+S+ AF R + V++ V L +++ F+ Q++
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQAN 111
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|1839517|gb|AAB47133.1| RhoE [Homo sapiens]
gi|49457093|emb|CAG46867.1| ARHE [Homo sapiens]
gi|344250801|gb|EGW06905.1| Rho-related GTP-binding protein RhoE [Cricetulus griseus]
Length = 229
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 7 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 64 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 99
>gi|396081038|gb|AFN82657.1| ARF GTP-binding ADP ribosylation factor [Encephalitozoon romaleae
SJ-2008]
Length = 184
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 16/117 (13%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
+++IL+LG AGKT + + + E+ HPT G +I Y + T + + D
Sbjct: 16 QLRILVLGLDNAGKTTILHKILS-KPIEDVHPTFGYQI------YDVSYKATSLIILDIG 68
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVP-------GHISELLLFYDYFV--TQSDLN 109
G F W ++ DV G++FVF+S GHI +L+ + +SDLN
Sbjct: 69 GQSMFIEYWSSYYEDVDGVVFVFDSSDSRSFVEHIGHIRSILVSTPMLILANKSDLN 125
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173
SS5]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|449448032|ref|XP_004141770.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E LD +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKE--VQLDDRLFTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + V++ V L + + F+ Q SD N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGN 125
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|327273872|ref|XP_003221703.1| PREDICTED: ras-related protein Rab-33B-like [Anolis carolinensis]
Length = 228
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C E T GV E + +D + +I+LWDT+G
Sbjct: 34 KIIVIGDSNVGKTCLTYRFCAGRFPERTEATIGVDFRE--RAVDIDGERIKIQLWDTAGQ 91
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 92 ERFRKSMVQHYYRNVHAVVFVYD 114
>gi|238581626|ref|XP_002389670.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
gi|215452189|gb|EEB90600.1| hypothetical protein MPER_11169 [Moniliophthora perniciosa FA553]
Length = 120
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|211938985|pdb|2V55|B Chain B, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
gi|211938987|pdb|2V55|D Chain D, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 200
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|83753568|pdb|1X3S|A Chain A, Crystal Structure Of Human Rab18 In Complex With Gppnhp
Length = 195
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 73
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 74 QERFRTLTPSYYRGAQGVILVYD 96
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVE------LEGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|57530682|ref|NP_001006355.1| ras-related protein Rab-18 [Gallus gallus]
gi|82233892|sp|Q5ZLG1.1|RAB18_CHICK RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|53129987|emb|CAG31432.1| hypothetical protein RCJMB04_6g4 [Gallus gallus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 137 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 190
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 191 TAGQERFRTITSSYYRGAHGIIVVYD 216
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKE--VQVDDRLVTMQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + V++ L + D F+ Q SD +N +++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDPDNFPFVVLGN 125
>gi|440803956|gb|ELR24839.1| Rab8/RabEfamily small GTPase, putative [Acanthamoeba castellanii
str. Neff]
Length = 208
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+L++G GK+ L D T + PT G+ + ++ + +++LWDT+G
Sbjct: 11 LKMLLVGDSGVGKSCLLQRFSDGTFTHSFMPTIGIDFKV--RTVPIEGKEIKLQLWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ A+ R HG++ V++
Sbjct: 69 QERFRTITAAYYRGGHGVVLVYD 91
>gi|340056350|emb|CCC50681.1| putative rab7 GTP binding protein [Trypanosoma vivax Y486]
Length = 211
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L + + Y T G + E +D +++WDT+G
Sbjct: 8 LKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFMTKE--LEVDGKSVTLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDN 118
+F+S+ AF R + VF+ S + + + F Q+ N C+LI N
Sbjct: 66 QERFQSLGSAFYRGADACVLVFDITQQESFSHVNSWLEEFRVQAGKCN--CVLIGN 119
>gi|193690904|ref|XP_001951763.1| PREDICTED: ras-related protein Rab-1A-like [Acyrthosiphon pisum]
Length = 208
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T + Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKI--RTIKLDNKTVKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD 89
>gi|149634680|ref|XP_001506607.1| PREDICTED: ras-related protein Rab-18-like [Ornithorhynchus
anatinus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|444707807|gb|ELW48981.1| Rho-related GTP-binding protein RhoE [Tupaia chinensis]
Length = 228
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 7 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 63
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 64 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 99
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T + Y T GV R +E LD ++++WD
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIE------LDRKTIKLQIWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 68 TAGQERFRTITSSYYRGAHGIIVVYD 93
>gi|410963376|ref|XP_003988241.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Felis catus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|410927788|ref|XP_003977322.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Takifugu
rubripes]
Length = 243
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPESYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|410923859|ref|XP_003975399.1| PREDICTED: ras-related protein Rab-12-like [Takifugu rubripes]
Length = 242
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWD 59
K++I+I+G GKT L D T E T GV +I E L K +++WD
Sbjct: 42 KLQIIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVE----LRGKKIRLQIWD 97
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F S+ A+ R GI+ V++
Sbjct: 98 TAGQERFNSITSAYYRGAKGIVLVYD 123
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|335775453|gb|AEH58577.1| Ras-related protein Rab-18-like protein [Equus caballus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267454|emb|CAJ81541.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134026214|gb|AAI35987.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|20663754|pdb|1GWN|A Chain A, The Crystal Structure Of The Core Domain Of RhoeRND3 - A
Constitutively Activated Small G Protein
gi|20663755|pdb|1GWN|C Chain C, The Crystal Structure Of The Core Domain Of RhoeRND3 - A
Constitutively Activated Small G Protein
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 27 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 83
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 84 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 119
>gi|417397093|gb|JAA45580.1| Putative rab subfamily protein of small gtpase [Desmodus
rotundus]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 68 TAGQERFRTITSSYYRGAHGIIVVYD 93
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T E Y T GV +I E D ++++WDT+
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQ----DQKTIKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F ++ ++ R HGII V++
Sbjct: 66 GQERFRTITSSYYRGAHGIIVVYD 89
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|10880989|ref|NP_067075.1| ras-related protein Rab-18 isoform 1 [Homo sapiens]
gi|197102556|ref|NP_001127616.1| ras-related protein Rab-18 [Pongo abelii]
gi|388452921|ref|NP_001253719.1| RAB18, member RAS oncogene family [Macaca mulatta]
gi|332240536|ref|XP_003269443.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Nomascus
leucogenys]
gi|332833815|ref|XP_003312545.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan troglodytes]
gi|397501611|ref|XP_003821474.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan paniscus]
gi|397501613|ref|XP_003821475.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan paniscus]
gi|402879861|ref|XP_003903543.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Papio anubis]
gi|403295005|ref|XP_003938447.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410043688|ref|XP_003951660.1| PREDICTED: ras-related protein Rab-18 [Pan troglodytes]
gi|426364298|ref|XP_004049255.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Gorilla gorilla
gorilla]
gi|12230528|sp|Q9NP72.1|RAB18_HUMAN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|75070476|sp|Q5R5H5.1|RAB18_PONAB RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|7381201|gb|AAF61433.1|AF137372_1 ras-related protein RAB18 [Homo sapiens]
gi|12239330|gb|AAG49435.1|AF136974_1 ras-related protein 18 [Homo sapiens]
gi|20379076|gb|AAM21098.1|AF498950_1 small GTP binding protein RAB18 [Homo sapiens]
gi|33150584|gb|AAP97170.1|AF087860_1 rab18 [Homo sapiens]
gi|7531023|emb|CAB86486.1| ras-related small GTPase RAB18 [Homo sapiens]
gi|12052987|emb|CAB66668.1| hypothetical protein [Homo sapiens]
gi|15929113|gb|AAH15014.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|20809384|gb|AAH29350.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|32880023|gb|AAP88842.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|49065336|emb|CAG38486.1| RAB18 [Homo sapiens]
gi|55732582|emb|CAH92991.1| hypothetical protein [Pongo abelii]
gi|61360907|gb|AAX41949.1| RAB18 member RAS oncogene family [synthetic construct]
gi|61360911|gb|AAX41950.1| RAB18 member RAS oncogene family [synthetic construct]
gi|90076230|dbj|BAE87795.1| unnamed protein product [Macaca fascicularis]
gi|90086345|dbj|BAE91725.1| unnamed protein product [Macaca fascicularis]
gi|117645108|emb|CAL38020.1| hypothetical protein [synthetic construct]
gi|119606460|gb|EAW86054.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606461|gb|EAW86055.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193786050|dbj|BAG50939.1| unnamed protein product [Homo sapiens]
gi|208967232|dbj|BAG73630.1| RAB18, member RAS oncogene family [synthetic construct]
gi|380810740|gb|AFE77245.1| ras-related protein Rab-18 [Macaca mulatta]
gi|383411947|gb|AFH29187.1| ras-related protein Rab-18 [Macaca mulatta]
gi|384945898|gb|AFI36554.1| ras-related protein Rab-18 [Macaca mulatta]
gi|410209604|gb|JAA02021.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410260764|gb|JAA18348.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410305300|gb|JAA31250.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410332701|gb|JAA35297.1| RAB18, member RAS oncogene family [Pan troglodytes]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|417408674|gb|JAA50877.1| Putative gtpase rab6/ypt6/ryh1 small g protein superfamily,
partial [Desmodus rotundus]
Length = 210
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 5 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 62
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R I+ VF+
Sbjct: 63 ERFKCIASTYYRGAQAIVIVFS 84
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|344277582|ref|XP_003410579.1| PREDICTED: ras-related protein Rab-18-like [Loxodonta africana]
Length = 206
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|340500595|gb|EGR27462.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 169
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+ LG GKT + E+ HPT GV + + +D ++LWDT
Sbjct: 18 VKHKIIFLGDQHVGKTCIIERFMYDVFDEKPHPTVGVDFLA--KTLHIDDKSIRLQLWDT 75
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G +F S+ P++ RD + VF+
Sbjct: 76 AGQERFRSLIPSYLRDATCAVIVFD 100
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|224044745|ref|XP_002187766.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|148707755|gb|EDL39702.1| RIKEN cDNA 5430435G22, isoform CRA_a [Mus musculus]
Length = 220
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 30 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 87
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 88 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 125
>gi|123493606|ref|XP_001326325.1| Ras-like GTP-binding protein RYL1 [Trichomonas vaginalis G3]
gi|62736308|gb|AAX97483.1| small Rab GTPase RabX5 [Trichomonas vaginalis]
gi|121909238|gb|EAY14102.1| Ras-like GTP-binding protein RYL1, putative [Trichomonas
vaginalis G3]
Length = 209
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
IK+LI+G GK+ L + E + T G+ +D +K ++++WDT+G
Sbjct: 8 IKLLIIGESSVGKSCLLLRFAEDKFNENFLTTIGIDFKV--RKVTIDDAKVKLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
KF ++ A+ R +GI+ VF+
Sbjct: 66 QEKFRTITKAYYRGANGILLVFD 88
>gi|410924888|ref|XP_003975913.1| PREDICTED: ras-related protein Rab-18-B-like [Takifugu rubripes]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+LI+G GK+ L D T E T GV + A+D ++ ++ +WDT+G
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTLAIDGNRAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|355714899|gb|AES05154.1| RAB33A, member RAS oncoprotein family [Mustela putorius furo]
Length = 152
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C + T GV E + +D + +I+LWDT+G
Sbjct: 4 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRE--RAVEIDGERIKIQLWDTAGQ 61
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 62 ERFRKSMVQHYYRNVHAVVFVYD 84
>gi|253741640|gb|EES98506.1| Rab1a [Giardia intestinalis ATCC 50581]
Length = 212
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L LCD Y T GV + DT K +++WDT+G
Sbjct: 11 KLLVIGDSGVGKSALLLRLCDKIFNASYITTIGVDFKVKSLNIKDDTVK--LQIWDTAGQ 68
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
KF ++ + R HGI+ V++
Sbjct: 69 EKFRTITSTYYRGAHGIMIVYD 90
>gi|167393567|ref|XP_001740630.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895203|gb|EDR22950.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 193
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIEL 57
K KI+++G GKT + L +++PT G +++E E+ +K E+ L
Sbjct: 5 KHKIVMVGDFSTGKTCMLIRLSQNFFDTQHNPTIGASFLKQVIELENG-----NKVEMNL 59
Query: 58 WDTSGDHKFESVWPAFQRDVHGIIFVFN 85
WDTSGD +F SV P + R I V++
Sbjct: 60 WDTSGDERFRSVMPVYFRGADCAIIVYD 87
>gi|117939025|dbj|BAF36666.1| Small G Protein RAB [Trichonympha agilis]
gi|117939027|dbj|BAF36667.1| Small G Protein RAB [Trichonympha agilis]
gi|117939029|dbj|BAF36668.1| Small G Protein RAB [Trichonympha agilis]
Length = 170
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+++LG GKT L N + +Y T G + E +D + +++WDT+G
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKE--VVVDNRQVTMQIWDTAGL 58
Query: 64 HKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R I V++ P L + + F+ Q D +N +L+ N
Sbjct: 59 ERFQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGN 116
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + + Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|432889390|ref|XP_004075253.1| PREDICTED: ras-related protein Rab-1A-like [Oryzias latipes]
Length = 221
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ +D ++++WD
Sbjct: 18 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------MDGKTVKLQIWD 71
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 72 TAGQERFRTITSSYYRGAHGIIIVYD 97
>gi|301788416|ref|XP_002929624.1| PREDICTED: ras-related protein Rab-18-like [Ailuropoda
melanoleuca]
Length = 206
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|345309236|ref|XP_001520847.2| PREDICTED: ras-related protein Rab-34-like [Ornithorhynchus
anatinus]
Length = 255
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K++++G + GKT L N C T + Y T GV E E L + ++LWDT+G
Sbjct: 44 KVIVVGDLSVGKTCLINRFCKDTFDKNYKATIGVDF-EMERFEVLGVPFS-LQLWDTAGQ 101
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F+ + + R I+ VF+
Sbjct: 102 ERFKCIASTYYRGAQAIVIVFD 123
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 15 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 72
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 73 ERFRTITSSYYRGAHGIIVVYD 94
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R ++ LD ++++WD
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTID------LDGKTIKLQIWD 66
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYD 92
>gi|213513040|ref|NP_001133731.1| Rho-related GTP-binding protein RhoE [Salmo salar]
gi|209155136|gb|ACI33800.1| Rho-related GTP-binding protein RhoE precursor [Salmo salar]
Length = 243
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDIFPESYMPTVFENYTA---SFEIDTKRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + ++
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDVSRPDTLDSVI 114
>gi|149058661|gb|EDM09818.1| similar to RAB7-like protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 208
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++I+G + GKT L + T EEY T G I+ LD + ++++WDT G
Sbjct: 18 LKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILS--KIIILDDTTLKLQIWDTGG 75
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYD 100
+F S+ F + G I F+ P L ++ D
Sbjct: 76 QERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRD 113
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT + N + +++Y T G + E +D ++LWDT+G
Sbjct: 9 LKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKE--VLVDDKVVTLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ L + D F+ Q+ +N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSN 114
>gi|395827177|ref|XP_003786782.1| PREDICTED: ras-related protein Rab-18 [Otolemur garnettii]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|355714854|gb|AES05139.1| RAB18, member RAS oncoprotein family [Mustela putorius furo]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|374081856|ref|NP_001243340.1| ras-related protein Rab-18 isoform 3 [Homo sapiens]
gi|397501617|ref|XP_003821477.1| PREDICTED: ras-related protein Rab-18 isoform 4 [Pan paniscus]
gi|426364302|ref|XP_004049257.1| PREDICTED: ras-related protein Rab-18 isoform 3 [Gorilla gorilla
gorilla]
gi|221041916|dbj|BAH12635.1| unnamed protein product [Homo sapiens]
Length = 197
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL
8126]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 14 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 67
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 68 TAGQERFRTITSSYYRGAHGICVVYD 93
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +E Y T GV R +E L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIE------LEGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|123407379|ref|XP_001302997.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121884338|gb|EAX90067.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 187
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
MKIK++ +GP AGKT + N + H + C+ ++ ++E+WDT
Sbjct: 1 MKIKLVFVGPSNAGKTSIINRF--VYNEFSVHILPSTQPAFCQKVIKVNNQNIQLEIWDT 58
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFN 85
+G ++ S+ P F RD I F+
Sbjct: 59 AGQERYHSLSPLFYRDADIGIVTFD 83
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|428672346|gb|EKX73260.1| Ras-related protein Rab7 small GTP-binging protein [Babesia equi]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KI+ILG GKT L N + +Y T G + E + +D + +++WDT+G
Sbjct: 8 LKIIILGDSGVGKTSLMNQFINKKFTNQYRATIGADFLTQEMT--VDDKEVTLQIWDTAG 65
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
+F+S+ AF R + V+++
Sbjct: 66 QERFQSLGKAFYRGADCCMLVYDT 89
>gi|407835694|gb|EKF99361.1| small GTP-binding protein Rab11, putative,Rab11 GTPase, putative
[Trypanosoma cruzi]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D + E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKI--RTLNLDGKVVKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFNS 86
+F ++ ++ R HGII V+++
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDT 90
>gi|302787687|ref|XP_002975613.1| ARF-like GTPase [Selaginella moellendorffii]
gi|300156614|gb|EFJ23242.1| ARF-like GTPase [Selaginella moellendorffii]
Length = 184
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++++ ++G AGKT L N++ + +E+ PT G + + + I+LWD
Sbjct: 19 EMELSVIGLQKAGKTSLVNSIATGSFSEDMIPTVGFNMRK------VSKGNVTIKLWDLG 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHI 92
G +F S+W + R V I++V ++ P +I
Sbjct: 73 GQARFRSMWERYCRGVSAIVYVVDAADPENI 103
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|18425204|ref|NP_569051.1| ADP-ribosylation factor-like A1D [Arabidopsis thaliana]
gi|15450888|gb|AAK96715.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana]
gi|17978675|gb|AAL47331.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana]
gi|21593081|gb|AAM65030.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana]
gi|332010977|gb|AED98360.1| ADP-ribosylation factor-like A1D [Arabidopsis thaliana]
Length = 184
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++++ ++G AGKT L N + +E+ PT G + + I+LWD
Sbjct: 19 EMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKG------SVTIKLWDLG 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV-- 119
G +F S+W + R V I++V ++ P ++S ++++ LN L++ N
Sbjct: 73 GQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKID 132
Query: 120 KPG 122
KPG
Sbjct: 133 KPG 135
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|330797322|ref|XP_003286710.1| hypothetical protein DICPUDRAFT_46949 [Dictyostelium purpureum]
gi|325083308|gb|EGC36764.1| hypothetical protein DICPUDRAFT_46949 [Dictyostelium purpureum]
Length = 114
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++K++++G + GKT + + L +EEY T G + + + T I+LWDT+
Sbjct: 9 QLKLILVGNMSVGKTSILHRLVFNKFSEEYRSTLGTDFLS--KTIYQNEIITHIQLWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLN 109
G KF + F R +I VF+ +L +Y F ++S +N
Sbjct: 67 GQEKFWCLTEVFWRTSDAVILVFDITNEQSFKDLNFWYKQFKSKSGVN 114
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 28 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 81
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 82 TAGQERFRTITSSYYRGAHGICVVYD 107
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D + E Y T GV R VE LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|149639476|ref|XP_001507142.1| PREDICTED: rho-related GTP-binding protein RhoE-like
[Ornithorhynchus anatinus]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGESQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis
CBS 6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis
CBS 6054]
Length = 208
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|115495023|ref|NP_001068967.1| ras-related protein Rab-18 [Bos taurus]
gi|335296519|ref|XP_003357800.1| PREDICTED: ras-related protein Rab-18-like [Sus scrofa]
gi|426240891|ref|XP_004014327.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Ovis aries]
gi|122142144|sp|Q0IIG8.1|RAB18_BOVIN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|113911817|gb|AAI22651.1| RAB18, member RAS oncogene family [Bos taurus]
gi|296481383|tpg|DAA23498.1| TPA: ras-related protein Rab-18 [Bos taurus]
gi|385281370|gb|AFI57837.1| ras-related protein Rab-18 [Capra hircus]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|56605932|ref|NP_001008466.1| ras-related protein Rab-33B [Gallus gallus]
gi|75571187|sp|Q5ZHV1.1|RB33B_CHICK RecName: Full=Ras-related protein Rab-33B
gi|53136726|emb|CAG32692.1| hypothetical protein RCJMB04_32p6 [Gallus gallus]
Length = 228
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C + T GV E + +D + +I+LWDT+G
Sbjct: 33 KIIVIGDSNVGKTCLTYRFCAGRFPQRTEATIGVDFRE--RAVTIDGERIKIQLWDTAGQ 90
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 91 ERFRKSMVQHYYRNVHAVVFVYD 113
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
KIL++G GK+ L D E + PT GV +I ++ L+ ++++WDT+
Sbjct: 12 KILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKI----RTFDLNGKTVKLQIWDTA 67
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
G +F+++ ++ + HGII V++
Sbjct: 68 GQERFKTITNSYYKGAHGIILVYD 91
>gi|9757877|dbj|BAB08464.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana]
Length = 165
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 8/122 (6%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+++ ++G AGKT L N + +E+ PT G + + I+LWD G
Sbjct: 1 MELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNM------RKVTKGSVTIKLWDLGG 54
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCLLIDNV--K 120
+F S+W + R V I++V ++ P ++S ++++ LN L++ N K
Sbjct: 55 QPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNKIDK 114
Query: 121 PG 122
PG
Sbjct: 115 PG 116
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R VE L+ ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVE------LEGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYD 89
>gi|388492594|gb|AFK34363.1| unknown [Medicago truncatula]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G V E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKE--LQIDDRLVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+F+S+ AF R + V++ V L +++ F+ Q++ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPFN 114
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|342184478|emb|CCC93960.1| putative small G-protein [Trypanosoma congolense IL3000]
Length = 226
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
IKI+++G GKT L D E+Y T GV VE S L ++ ++ LWDT+G
Sbjct: 8 IKIILVGDGAVGKTALLRRFADGEFVEQYKSTAGVEYVEKTISLPLIGTRLKLVLWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNS 86
S+ +F R I +F++
Sbjct: 68 QESVNSIPDSFYRGAAVAIVLFST 91
>gi|302662118|ref|XP_003022718.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
gi|291186678|gb|EFE42100.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
Length = 316
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
++I+++ILG GKT L N + + Y T G + E +D +++WDT
Sbjct: 118 LQIQVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKE--VMVDGRLVTMQIWDT 175
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
+G +F+S+ AF R + V++ L + D F+ Q++L +
Sbjct: 176 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRD 225
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L + T ++Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|195350726|ref|XP_002041889.1| GM11294 [Drosophila sechellia]
gi|194123694|gb|EDW45737.1| GM11294 [Drosophila sechellia]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYA-LDTSKTEIELWDTS 61
K+LI+G GK+ L + E Y T G+ I SY L K +E+WDT+
Sbjct: 8 FKVLIVGDTGVGKSSLMMRFTENKFLENYMCTVGMDI---RASYVELLEGKMMLEVWDTT 64
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN 85
GD + +S P+F HG++ V++
Sbjct: 65 GDERLKSAMPSFYHGAHGVLLVYD 88
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|413946251|gb|AFW78900.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +++Y T G + E + +++WDT+G
Sbjct: 10 LKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKE--VLIGDRLVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQ---SDLNNHKCLLIDN 118
+F+S+ AF R + V++ V + L ++D F+ Q SD +L+ N
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDPQRFPFILVGN 126
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K+++LG GKT L N +Y T G E +D +++WDT+G
Sbjct: 9 LKVIVLGDSGVGKTCLMNQFVSKKFTNQYKATIGADFQTKE--VMVDNKLITLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN 118
+F+S+ F R + V++ P L + D F+ QS D N ++I N
Sbjct: 67 QERFQSLGVGFYRGADCCVLVYDVTSPTTFKSLESWRDEFLIQSSPKDPENFPFVVIGN 125
>gi|344268089|ref|XP_003405896.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Loxodonta
africana]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|126326174|ref|XP_001365209.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Monodelphis
domestica]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|441658196|ref|XP_004091248.1| PREDICTED: ras-related protein Rab-18 [Nomascus leucogenys]
Length = 197
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 23 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 76
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 77 TAGQERFRTITSSYYRGAHGICVVYD 102
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + E +D +++WDT+G
Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKE--VTIDDKVVTLQIWDTAG 68
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R V++ P L + D F+ Q+
Sbjct: 69 QERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQA 112
>gi|189053783|dbj|BAG36035.1| unnamed protein product [Homo sapiens]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L + T ++Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|399163149|gb|AFP33150.1| rab-7, partial [Caenorhabditis elegans]
Length = 208
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D +++WDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLT--RDVNIDDRTVTLQIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN- 118
+F+S+ AF R + F+ L + D F+ Q+ D ++ +L+ N
Sbjct: 67 QERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNK 126
Query: 119 --VKPGRGDSSGHAHS 132
++ R SS A S
Sbjct: 127 VDLESQRAVSSKRAQS 142
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T +Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 20/126 (15%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV--RIVECEHSYALDTSKTEIELWDTS 61
K+L++G GK+ L D T +Y T GV +I E LD ++++WDT+
Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVE----LDGKTVKLQIWDTA 65
Query: 62 GDHKFESVWPAFQRDVHGIIFVFN-------SGVPGHISELLLFYDYFVTQSDLN---NH 111
G +F ++ ++ R HGII V++ +GV + E+ D + T + L +
Sbjct: 66 GQERFRTITSSYYRGSHGIIIVYDVTDQDSFNGVKMWLQEI----DRYATSTVLKLLVGN 121
Query: 112 KCLLID 117
KC L D
Sbjct: 122 KCDLTD 127
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VLVDDRQVTMQLWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ L + D F+ Q+
Sbjct: 68 QERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQA 111
>gi|4885069|ref|NP_005159.1| rho-related GTP-binding protein RhoE precursor [Homo sapiens]
gi|13386354|ref|NP_083086.1| rho-related GTP-binding protein RhoE precursor [Mus musculus]
gi|56090636|ref|NP_001007642.1| rho-related GTP-binding protein RhoE precursor [Rattus norvegicus]
gi|300793833|ref|NP_001178087.1| rho-related GTP-binding protein RhoE [Bos taurus]
gi|362999085|ref|NP_001241667.1| rho-related GTP-binding protein RhoE precursor [Homo sapiens]
gi|387762577|ref|NP_001248611.1| rho-related GTP-binding protein RhoE [Macaca mulatta]
gi|114581184|ref|XP_001135812.1| PREDICTED: rho-related GTP-binding protein RhoE isoform 1 [Pan
troglodytes]
gi|149730611|ref|XP_001488263.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Equus
caballus]
gi|296204818|ref|XP_002749488.1| PREDICTED: rho-related GTP-binding protein RhoE [Callithrix
jacchus]
gi|332251734|ref|XP_003275003.1| PREDICTED: rho-related GTP-binding protein RhoE [Nomascus
leucogenys]
gi|348585979|ref|XP_003478748.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Cavia
porcellus]
gi|354500217|ref|XP_003512197.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Cricetulus
griseus]
gi|358422377|ref|XP_003585345.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Bos taurus]
gi|395840428|ref|XP_003793061.1| PREDICTED: rho-related GTP-binding protein RhoE [Otolemur
garnettii]
gi|397491576|ref|XP_003816729.1| PREDICTED: rho-related GTP-binding protein RhoE [Pan paniscus]
gi|402888325|ref|XP_003907516.1| PREDICTED: rho-related GTP-binding protein RhoE [Papio anubis]
gi|403259012|ref|XP_003922032.1| PREDICTED: rho-related GTP-binding protein RhoE [Saimiri
boliviensis boliviensis]
gi|410968630|ref|XP_003990805.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Felis catus]
gi|426221118|ref|XP_004004758.1| PREDICTED: rho-related GTP-binding protein RhoE [Ovis aries]
gi|47606459|sp|P61587.1|RND3_HUMAN RecName: Full=Rho-related GTP-binding protein RhoE; AltName:
Full=Protein MemB; AltName: Full=Rho family GTPase 3;
AltName: Full=Rho-related GTP-binding protein Rho8;
AltName: Full=Rnd3; Flags: Precursor
gi|47606460|sp|P61588.1|RND3_MOUSE RecName: Full=Rho-related GTP-binding protein RhoE; AltName:
Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags:
Precursor
gi|52783217|sp|Q6SA80.1|RND3_RAT RecName: Full=Rho-related GTP-binding protein RhoE; AltName:
Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags:
Precursor
gi|20379112|gb|AAM21116.1|AF498969_1 small GTP binding protein Rho8 [Homo sapiens]
gi|1171566|emb|CAA64603.1| Rho8 protein [Homo sapiens]
gi|12847569|dbj|BAB27622.1| unnamed protein product [Mus musculus]
gi|14290474|gb|AAH09002.1| Rho family GTPase 3 [Mus musculus]
gi|15214763|gb|AAH12513.1| Rho family GTPase 3 [Homo sapiens]
gi|26330490|dbj|BAC28975.1| unnamed protein product [Mus musculus]
gi|30582377|gb|AAP35415.1| ras homolog gene family, member E [Homo sapiens]
gi|38532563|gb|AAR23526.1| RHOE [Rattus norvegicus]
gi|51870480|emb|CAA66352.1| memB [Homo sapiens]
gi|61359538|gb|AAX41733.1| ras-like gene family member E [synthetic construct]
gi|119631929|gb|EAX11524.1| Rho family GTPase 3, isoform CRA_a [Homo sapiens]
gi|119631931|gb|EAX11526.1| Rho family GTPase 3, isoform CRA_a [Homo sapiens]
gi|123979524|gb|ABM81591.1| Rho family GTPase 3 [synthetic construct]
gi|123979526|gb|ABM81592.1| Rho family GTPase 3 [synthetic construct]
gi|148694944|gb|EDL26891.1| Rho family GTPase 3 [Mus musculus]
gi|148745058|gb|AAI42514.1| RND3 protein [Bos taurus]
gi|149047837|gb|EDM00453.1| rCG37690 [Rattus norvegicus]
gi|157928665|gb|ABW03618.1| Rho family GTPase 3 [synthetic construct]
gi|195540212|gb|AAI68142.1| Rho family GTPase 3 [Rattus norvegicus]
gi|261860334|dbj|BAI46689.1| Rho family GTPase 3 [synthetic construct]
gi|296490581|tpg|DAA32694.1| TPA: ras homolog gene family, member E [Bos taurus]
gi|355564883|gb|EHH21372.1| hypothetical protein EGK_04417 [Macaca mulatta]
gi|355750534|gb|EHH54861.1| hypothetical protein EGM_03956 [Macaca fascicularis]
gi|380812682|gb|AFE78215.1| rho-related GTP-binding protein RhoE precursor [Macaca mulatta]
gi|410221884|gb|JAA08161.1| Rho family GTPase 3 [Pan troglodytes]
gi|410221886|gb|JAA08162.1| Rho family GTPase 3 [Pan troglodytes]
gi|410221888|gb|JAA08163.1| Rho family GTPase 3 [Pan troglodytes]
gi|410221890|gb|JAA08164.1| Rho family GTPase 3 [Pan troglodytes]
gi|410221892|gb|JAA08165.1| Rho family GTPase 3 [Pan troglodytes]
gi|410266006|gb|JAA20969.1| Rho family GTPase 3 [Pan troglodytes]
gi|410295952|gb|JAA26576.1| Rho family GTPase 3 [Pan troglodytes]
gi|410295954|gb|JAA26577.1| Rho family GTPase 3 [Pan troglodytes]
gi|410295956|gb|JAA26578.1| Rho family GTPase 3 [Pan troglodytes]
gi|410338239|gb|JAA38066.1| Rho family GTPase 3 [Pan troglodytes]
gi|410338241|gb|JAA38067.1| Rho family GTPase 3 [Pan troglodytes]
gi|410338243|gb|JAA38068.1| Rho family GTPase 3 [Pan troglodytes]
gi|410338245|gb|JAA38069.1| Rho family GTPase 3 [Pan troglodytes]
gi|440906629|gb|ELR56868.1| Rho-related GTP-binding protein RhoE [Bos grunniens mutus]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E L+ ++++WD
Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LEGKTVKLQIWD 64
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYD 90
>gi|302783633|ref|XP_002973589.1| ARF-like GTPase [Selaginella moellendorffii]
gi|300158627|gb|EFJ25249.1| ARF-like GTPase [Selaginella moellendorffii]
Length = 184
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 2 KIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTS 61
++++ ++G AGKT L N++ + +E+ PT G + + + I+LWD
Sbjct: 19 EMELSVIGLQKAGKTSLVNSIATGSFSEDMIPTVGFNMRK------VSKGNVTIKLWDLG 72
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHI 92
G +F S+W + R V I++V ++ P +I
Sbjct: 73 GQARFRSMWERYCRGVSAIVYVVDAADPENI 103
>gi|123994343|gb|ABM84773.1| Rho family GTPase 3 [synthetic construct]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|432849677|ref|XP_004066620.1| PREDICTED: rho-related GTP-binding protein RhoE-like [Oryzias
latipes]
Length = 243
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPESYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|426337386|ref|XP_004032689.1| PREDICTED: rho-related GTP-binding protein RhoE [Gorilla gorilla
gorilla]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|402879863|ref|XP_003903544.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Papio anubis]
Length = 197
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+KILI+G GK+ L D T E T GV + ++D +K ++ +WDT+G
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKV--KTISVDGNKAKLAIWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFN 85
+F ++ P++ R G+I V++
Sbjct: 67 QERFRTLTPSYYRGAQGVILVYD 89
>gi|395519532|ref|XP_003763898.1| PREDICTED: rho-related GTP-binding protein RhoE [Sarcophilus
harrisii]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|380793425|gb|AFE68588.1| rab-like protein 5 isoform b, partial [Macaca mulatta]
Length = 48
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVEC 42
+K KIL +GP +GKTVLAN L + + EY PTQGVR C
Sbjct: 2 LKAKILFVGPCESGKTVLANFLTESSDITEYSPTQGVRFESC 43
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 70
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYD 92
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 70
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 71 ERFRTITSSYYRGAHGIIVVYD 92
>gi|197102466|ref|NP_001125947.1| rho-related GTP-binding protein RhoE precursor [Pongo abelii]
gi|75054961|sp|Q5R9F4.1|RND3_PONAB RecName: Full=Rho-related GTP-binding protein RhoE; AltName:
Full=Rho family GTPase 3; AltName: Full=Rnd3; Flags:
Precursor
gi|55729755|emb|CAH91606.1| hypothetical protein [Pongo abelii]
Length = 244
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|17536699|ref|NP_496549.1| Protein RAB-7 [Caenorhabditis elegans]
gi|268533066|ref|XP_002631661.1| C. briggsae CBR-RAB-7 protein [Caenorhabditis briggsae]
gi|3880453|emb|CAA91357.1| Protein RAB-7 [Caenorhabditis elegans]
gi|341885407|gb|EGT41342.1| hypothetical protein CAEBREN_32671 [Caenorhabditis brenneri]
Length = 209
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D +++WDT+G
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLT--RDVNIDDRTVTLQIWDTAG 67
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN- 118
+F+S+ AF R + F+ L + D F+ Q+ D ++ +L+ N
Sbjct: 68 QERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNK 127
Query: 119 --VKPGRGDSSGHAHS 132
++ R SS A S
Sbjct: 128 VDLESQRAVSSKRAQS 143
>gi|417407248|gb|JAA50243.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 167
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 13 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 69
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 70 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 105
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYD 89
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K+L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTVKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGI V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGICIVYD 89
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSK-TEIELWDTS 61
+K++ILG GKT L + + +Y T G + E +D +K +++WDT+
Sbjct: 9 LKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKE--ITIDNNKQVTLQIWDTA 66
Query: 62 GDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNN 110
G +F+S+ AF R + ++ ++ L + D F+ QS+++N
Sbjct: 67 GQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLSSWKDEFLIQSNVSN 115
>gi|167376412|ref|XP_001733984.1| GTP-binding protein YPT7 [Entamoeba dispar SAW760]
gi|165904672|gb|EDR29860.1| GTP-binding protein YPT7, putative [Entamoeba dispar SAW760]
Length = 192
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K +I+G GKT + T EE T G V+CE + S ++ +WDT G
Sbjct: 6 KTVIIGDSGVGKTCIIQRFTKGTFNEEQAATVGASFVDCEFKLPNNES-YKLRIWDTCGQ 64
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
F+S+ P + R+ +I VF+
Sbjct: 65 ESFQSIIPMYFRNASCVILVFD 86
>gi|145487348|ref|XP_001429679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396773|emb|CAK62281.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHP---------TQGVRIVECEH--SYALDTSK 52
KILI+G AGKT L N L L HP T G+ I E E+ S K
Sbjct: 19 KILIIGLDGAGKTTLLNKLKQLAK----HPFIQFDKIPKTVGLNITEIEYMASNRSMNQK 74
Query: 53 TEIELWDTSGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFV 103
++ WD G S+W + + HGIIFV + E+ + Y++
Sbjct: 75 YKVTYWDLGGSQTQRSIWKKYYGECHGIIFVIDGNKSERWDEVRNCFKYYI 125
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VLVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQA 110
>gi|73535745|pdb|1Z06|A Chain A, Gppnhp-Bound Rab33 Gtpase
Length = 189
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
KI+++G GKT L C + T GV E + +D + +I+LWDT+G
Sbjct: 22 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRE--RAVDIDGERIKIQLWDTAGQ 79
Query: 64 HKF-ESVWPAFQRDVHGIIFVFN 85
+F +S+ + R+VH ++FV++
Sbjct: 80 ERFRKSMVQHYYRNVHAVVFVYD 102
>gi|355716710|gb|AES05698.1| Rho family GTPase 3 [Mustela putorius furo]
Length = 242
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 21 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 77
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 78 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 113
>gi|119631930|gb|EAX11525.1| Rho family GTPase 3, isoform CRA_b [Homo sapiens]
gi|119631932|gb|EAX11527.1| Rho family GTPase 3, isoform CRA_b [Homo sapiens]
gi|119631933|gb|EAX11528.1| Rho family GTPase 3, isoform CRA_b [Homo sapiens]
Length = 243
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|32401324|gb|AAP80834.1| GTP-binding protein [Griffithsia japonica]
Length = 154
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGV----RIVECEHSYALDTSKTEIELWD 59
K L++G GK+ L D T E Y T GV R +E LD ++++WD
Sbjct: 10 KNLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIE------LDGKTIKLQIWD 63
Query: 60 TSGDHKFESVWPAFQRDVHGIIFVFN 85
T+G +F ++ ++ R HGII V++
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYD 89
>gi|66824201|ref|XP_645455.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208509|sp|P34143.2|RABC_DICDI RecName: Full=Ras-related protein RabC
gi|60473617|gb|EAL71558.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 196
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKT-EIELWDTSG 62
KI+++G GK+ + D T ++ + PT GV + +T +T +++LWDT+G
Sbjct: 8 KIILVGESGVGKSSILVRFTDNTFSQHFAPTLGVDF-NVKTIRNKETGQTVKLQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVP 89
+F+S+ F R HG+I V++ P
Sbjct: 67 QERFKSITQTFYRGSHGVIVVYDVTDP 93
>gi|30584527|gb|AAP36516.1| Homo sapiens ras homolog gene family, member E [synthetic
construct]
gi|61369614|gb|AAX43360.1| ras-like gene family member E [synthetic construct]
gi|61369621|gb|AAX43361.1| ras-like gene family member E [synthetic construct]
Length = 245
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 1 MKIKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDT 60
+K KI+++G GKT L + E Y PT S+ +DT + E+ LWDT
Sbjct: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA---SFEIDTQRIELSLWDT 78
Query: 61 SGDHKFESVWPAFQRDVHGIIFVFNSGVPGHISELL 96
SG +++V P D ++ F+ P + +L
Sbjct: 79 SGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVL 114
>gi|402085554|gb|EJT80452.1| Ras-like protein Rab7 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + Y T G + E +D + ++LWDT+G
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTRE--VLVDDRQVTMQLWDTAG 66
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS 106
+F+S+ AF R + V++ L + D F+ Q+
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQA 110
>gi|308502456|ref|XP_003113412.1| CRE-RAB-7 protein [Caenorhabditis remanei]
gi|308263371|gb|EFP07324.1| CRE-RAB-7 protein [Caenorhabditis remanei]
Length = 245
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D +++WDT+G
Sbjct: 46 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLT--RDVNIDDRTVTLQIWDTAG 103
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQS---DLNNHKCLLIDN- 118
+F+S+ AF R + F+ L + D F+ Q+ D ++ +L+ N
Sbjct: 104 QERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNK 163
Query: 119 --VKPGRGDSSGHAHS 132
++ R SS A S
Sbjct: 164 VDLESQRAVSSKRAQS 179
>gi|209879788|ref|XP_002141334.1| Rab7 GTPase protein [Cryptosporidium muris RN66]
gi|209556940|gb|EEA06985.1| Rab7 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 213
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 3 IKILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSG 62
+K++ILG GKT L N + + +Y T G + +D +++WDT+G
Sbjct: 15 LKVIILGDSGVGKTSLMNQYVNKKFSMQYKATIGADFLT--KDIVIDNKLVTLQIWDTAG 72
Query: 63 DHKFESVWPAFQRDVHGIIFVFNSGVPGHISELLLFYDYFVTQSDLNNHKCL 114
+F+S+ AF R V++ P L + + F+ Q+ + C
Sbjct: 73 QERFQSLGVAFYRGADCCALVYDMTNPKSFDGLEAWREEFLIQAAPKDPNCF 124
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium
castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 4 KILILGPIMAGKTVLANALCDLTTAEEYHPTQGVRIVECEHSYALDTSKTEIELWDTSGD 63
K+L++G GK+ L D T E Y T GV + LD ++++WDT+G
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI--RTIDLDGKTIKLQIWDTAGQ 67
Query: 64 HKFESVWPAFQRDVHGIIFVFN 85
+F ++ ++ R HGII V++
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYD 89
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,167,703,602
Number of Sequences: 23463169
Number of extensions: 81704396
Number of successful extensions: 280032
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3376
Number of HSP's successfully gapped in prelim test: 8207
Number of HSP's that attempted gapping in prelim test: 272293
Number of HSP's gapped (non-prelim): 11681
length of query: 135
length of database: 8,064,228,071
effective HSP length: 100
effective length of query: 35
effective length of database: 10,012,878,467
effective search space: 350450746345
effective search space used: 350450746345
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)