RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10118
(409 letters)
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold,
hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus
familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Length = 377
Score = 273 bits (698), Expect = 8e-89
Identities = 105/362 (29%), Positives = 167/362 (46%), Gaps = 59/362 (16%)
Query: 104 DTAALIELWGYKSEEHKVTTEDGYIISLYRILPKQEGS------PPVLVMHGFLACSETF 157
+ + +I WGY +EE++V TEDGYI+ + RI ++ S P + HG LA + +
Sbjct: 15 NISQMITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNW 74
Query: 158 LVRGKPD-LAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAF 216
+ + LA +L++AGYDVWL N RGN + ++ + + FW FSF EM YDLPA
Sbjct: 75 ISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFDEMAKYDLPAT 134
Query: 217 VDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASH------- 269
+DFIL +TG K+ +GHS I I S P+ ++I F +AP +
Sbjct: 135 IDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETLINK 194
Query: 270 ------------------LRQGPLLEFLIKSV--------------------------SN 285
+FL V +
Sbjct: 195 LMLVPSFLFKLIFGNKIFYPHHFFDQFLATEVCSRETVDLLCSNALFIICGFDTMNLNMS 254
Query: 286 LVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGR-DQNLLRYNSEEPPDYDLSRVTI 344
+ + P+GTS+ + H + +F FD+G QN++ Y+ PP Y+L+ + +
Sbjct: 255 RLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDMHV 314
Query: 345 PILLYSGGADFFTDSRDVTRLEMSLPNLIGSHVLTTYNHFDFVISSDTKEVFYDDMMEVV 404
PI +++GG D D DV L LPNLI + YNH DF+ + D + Y++++ ++
Sbjct: 315 PIAVWNGGNDLLADPHDVDLLLSKLPNLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMM 374
Query: 405 AK 406
Sbjct: 375 GT 376
Score = 34.2 bits (78), Expect = 0.072
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 6/40 (15%)
Query: 1 MHRIVPKYANS------PPVLLQHGLCLASDSWVLRGQED 34
+ RI NS P LQHGL ++ +W+ +
Sbjct: 42 IDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNN 81
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 69.3 bits (169), Expect = 2e-13
Identities = 33/254 (12%), Positives = 83/254 (32%), Gaps = 40/254 (15%)
Query: 115 KSEEHKVTTEDGYIISLYRILPKQEGS---PPVLVMHGFLACSETFLVRGKPDLAIMLSE 171
K+ H + +G + ++ PK+ +L+ GF + F LA LS
Sbjct: 6 KTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFA-----GLAEYLST 60
Query: 172 AGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTL 231
G+ V+ + + G + +F+ L + L G + L
Sbjct: 61 NGFHVFRYDSLH-HVGLS-------SGSIDEFTMTTG-KNSLCTVYHW-LQTKGTQNIGL 110
Query: 232 LGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSIN 291
+ S S + + S + +++ + V + L + + +P+
Sbjct: 111 IAASLSARVAYEVIS-----DLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPND- 164
Query: 292 GYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSG 351
G L + + D + +++ + ++ ++P++ ++
Sbjct: 165 -LDFEGHKLGSEVFVRDCFEHH---------------WDTLDSTLDKVANTSVPLIAFTA 208
Query: 352 GADFFTDSRDVTRL 365
D + +V +
Sbjct: 209 NNDDWVKQEEVYDM 222
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 61.5 bits (148), Expect = 1e-10
Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 14/155 (9%)
Query: 120 KVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLV-------RGKPD----LAIM 168
K IISL+++ G+ VL++ G + E + PD + +
Sbjct: 29 KREDSPYDIISLHKVNLIGGGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLY 88
Query: 169 LSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMK 228
L+ G++V+ ++R +Y + W +S + D+ V FI +G +
Sbjct: 89 LARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTW---ISDIKEVVSFIKRDSGQER 145
Query: 229 MTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAP 263
+ L G SF + +SL + + K + + P
Sbjct: 146 IYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGP 180
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 57.9 bits (140), Expect = 1e-09
Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 18/152 (11%)
Query: 114 YKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAG 173
++ DG + R P E ++ HGF A T L+R ++A L +
Sbjct: 19 FQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRNTSLLR---EIANSLRDEN 75
Query: 174 YDVWLSNFRGNYNGKG-HINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLL 232
+F G+ + G NMT +E + D A ++++ + L+
Sbjct: 76 IASVRFDFNGHGDSDGKFENMTVLNE-----------IEDANAILNYVKTDPHVRNIYLV 124
Query: 233 GHSFSNAIIMIMTSLRPEYNEKINLFVGMAPF 264
GH+ + ++ L P + I V +AP
Sbjct: 125 GHAQGGVVASMLAGLYP---DLIKKVVLLAPA 153
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 55.5 bits (134), Expect = 1e-08
Identities = 54/265 (20%), Positives = 88/265 (33%), Gaps = 46/265 (17%)
Query: 116 SEEHKVTTEDGYIISLYRILPKQEGSP--PVLVMHGFLACSETFLVRGKPDLAIMLSEAG 173
+ + DG + P G+P + V HG S + +LA ML
Sbjct: 35 QDLPHLVNADGQYLFCRYWKP--TGTPKALIFVSHGAGEHSGRYE-----ELARMLMGLD 87
Query: 174 YDVWLSNFRGNYNGK-----GHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMK 228
V+ + G+ G+ ++ FH + D+ VD + +
Sbjct: 88 LLVFAHDHVGH--GQSEGERMVVS-----------DFHVF-VRDVLQHVDSMQKDYPGLP 133
Query: 229 MTLLGHSF-SNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLV 287
+ LLGHS I+ E V ++P V A+ K ++ ++
Sbjct: 134 VFLLGHSMGGAIAILTAA----ERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNLVL 189
Query: 288 P--SINGYFPSGTSLYTMAHLIDLYRQ-RRFCQFDY----GRDQNLLRYNSEEPPDYDLS 340
P S+ S L +D+Y C+ G LL L
Sbjct: 190 PNLSLGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQ--LLN-AVSRVER-ALP 243
Query: 341 RVTIPILLYSGGADFFTDSRDVTRL 365
++T+P LL G AD DS+ L
Sbjct: 244 KLTVPFLLLQGSADRLCDSKGAYLL 268
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida
antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A*
1tcc_A*
Length = 317
Score = 54.4 bits (130), Expect = 2e-08
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 20/124 (16%)
Query: 140 GSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDEN 199
S P+L++ G + ++ GY + + E
Sbjct: 30 VSKPILLVPGTGTTGPQSFDSN---WIPLSTQLGYTPCWISPPPF--MLNDTQVNTEY-- 82
Query: 200 FWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFV 259
+ + + +G K+ +L S + + P K++ +
Sbjct: 83 -------------MVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLM 129
Query: 260 GMAP 263
AP
Sbjct: 130 AFAP 133
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 54.2 bits (131), Expect = 2e-08
Identities = 53/263 (20%), Positives = 87/263 (33%), Gaps = 42/263 (15%)
Query: 116 SEEHKVTTEDGYIISLYRILPKQEGSPP--VLVMHGFLACSETFLVRGKPDLAIMLSEAG 173
+ + DG + P G+P + V HG S + +LA ML
Sbjct: 17 QDLPHLVNADGQYLFCRYWAP--TGTPKALIFVSHGAGEHSGRYE-----ELARMLMGLD 69
Query: 174 YDVWLSNFRGNYNGK-----GHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMK 228
V+ + G+ G+ ++ FH + D+ VD + +
Sbjct: 70 LLVFAHDHVGH--GQSEGERMVVS-----------DFHVF-VRDVLQHVDSMQKDYPGLP 115
Query: 229 MTLLGHSF-SNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLV 287
+ LLGHS I+ E V ++P V A+ K +++++
Sbjct: 116 VFLLGHSMGGAIAILTAA----ERPGHFAGMVLISPLVLANPESATTFKVLAAKVLNSVL 171
Query: 288 P--SINGYFPSGTSLYTMAHLIDLYRQ-RRFCQFDYGRD--QNLLRYNSEEPPDYDLSRV 342
P S S L +D+Y C+ LL L ++
Sbjct: 172 PNLSSGPIDSSV--LSRNKTEVDIYNSDPLICRAGLKVCFGIQLLN-AVSRVER-ALPKL 227
Query: 343 TIPILLYSGGADFFTDSRDVTRL 365
T+P LL G AD DS+ L
Sbjct: 228 TVPFLLLQGSADRLCDSKGAYLL 250
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 52.7 bits (127), Expect = 4e-08
Identities = 42/288 (14%), Positives = 90/288 (31%), Gaps = 47/288 (16%)
Query: 122 TTEDGYIISLYRILPKQ--EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLS 179
DG ++ Y +PK E P +++HGF SE + + L+E G +
Sbjct: 6 IDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIV---AVQETLNEIGVATLRA 62
Query: 180 NFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNA 239
+ G+ GK D F + + L ++ A VD+ + + GHS
Sbjct: 63 DMYGH--GKS-------DGKFEDHTLFKW-LTNILAVVDYAKKLDFVTDIYMAGHSQG-G 111
Query: 240 IIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSINGYFPSGTS 299
+ +++ + + I + ++P + + L L N+ ++ +
Sbjct: 112 LSVMLAAAM--ERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDG---- 165
Query: 300 LYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDS 359
+ + + + + + + T P+L+ G D
Sbjct: 166 -RKLK--------GNY--VRVAQTIRVEDF---------VDKYTKPVLIVHGDQDEAVPY 205
Query: 360 RDVTRLEMSLPNLIGSHVLTTYNHFDFVISSDTKEVFYDDMMEVVAKY 407
N L T + V + + E + +
Sbjct: 206 EASVAFSKQYKN----CKLVTIPGDTHCYDHHLELVT-EAVKEFMLEQ 248
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic
residues, glycoprotein, hydrolase, lipid degradation,
zymogen, disulf; HET: NAG BTB; 1.49A {Candida
antarctica} PDB: 3icw_A*
Length = 316
Score = 52.9 bits (126), Expect = 6e-08
Identities = 15/124 (12%), Positives = 34/124 (27%), Gaps = 20/124 (16%)
Query: 140 GSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDEN 199
S P+L++ G + ++ GY + + E
Sbjct: 64 VSKPILLVPGTGTTGPQSFDSN---WIPLSAQLGYTPCWISPPPF--MLNDTQVNTEY-- 116
Query: 200 FWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFV 259
+ + + +G K+ +L S + + P K++ +
Sbjct: 117 -------------MVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLM 163
Query: 260 GMAP 263
AP
Sbjct: 164 AFAP 167
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A
{Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Length = 484
Score = 53.0 bits (126), Expect = 9e-08
Identities = 24/164 (14%), Positives = 47/164 (28%), Gaps = 20/164 (12%)
Query: 136 PKQEGSPPVLVMHGFL--------------------ACSETFLVRGKPDLAIMLSEAGYD 175
E PV+ +HG +TF ++ ++ +
Sbjct: 17 AAAEDFRPVVFVHGLAGSAGQFESQGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFS 76
Query: 176 VWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHS 235
S F N + + + + + L +D L +G K+ L+GHS
Sbjct: 77 GLGSEFGLNISQIIDPETLDKILSKSRERLIDETFSRLDRVIDEALAESGADKVDLVGHS 136
Query: 236 FSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFL 279
++ + PE K+ + + P L
Sbjct: 137 MGTFFLVRYVNSSPERAAKVAHLILLDGVWGVDAPEGIPTLAVF 180
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 47.2 bits (112), Expect = 4e-06
Identities = 39/266 (14%), Positives = 73/266 (27%), Gaps = 62/266 (23%)
Query: 139 EGSPP-VLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAED 197
EG+ V+++H + +A L +GY V++ F G+ + +T +
Sbjct: 19 EGTDTGVVLLHAYTGSPNDMN-----FMARALQRSGYGVYVPLFSGHGTVEPLDILTKGN 73
Query: 198 ENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINL 257
+ W + A V + + K+ + G S M P
Sbjct: 74 PDIW--------WAESSAAVAHM--TAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVF 123
Query: 258 FVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSIN------GYFPSGTSLYTMAHLIDLYR 311
+P + P + ++ L + Y P L +
Sbjct: 124 S---SP-ILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLP--GQLAAIDQFATTVA 177
Query: 312 QRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
L+ V P + G D D R +L +L N
Sbjct: 178 AD-------------------------LNLVKQPTFIGQAGQDELVDGRLAYQLRDALIN 212
Query: 372 --------LIGS-HVLTTYNHFDFVI 388
+ HV+T + +
Sbjct: 213 AARVDFHWYDDAKHVITVNSAHHALE 238
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 45.8 bits (109), Expect = 9e-06
Identities = 43/281 (15%), Positives = 83/281 (29%), Gaps = 56/281 (19%)
Query: 117 EEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDV 176
E+ T+ DG + +R PPVL + G + F DLA L+ + V
Sbjct: 6 EDRYWTSSDGLRLH-FRAYEGDISRPPVLCLPGLTRNARDFE-----DLATRLA-GDWRV 58
Query: 177 WLSNFRGNYNGKGHINMTAEDENFWKFSFH-------EMGLYDLPAFVDFI---LHRTGF 226
RG + Y ++ + L + G
Sbjct: 59 LCPEMRG----------------------RGDSDYAKDPMTYQPMQYLQDLEALLAQEGI 96
Query: 227 MKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFV-------FASHLRQGPLLEFL 279
+ +G S + M++ + P L + P V ++ QG E
Sbjct: 97 ERFVAIGTSLGGLLTMLLAAANPARIAAAVL-NDVGPEVSPEGLERIRGYVGQGRNFETW 155
Query: 280 IKSVSNLVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNL---LRYNSEEPPD 336
+ + L S +P + + + + + D + P
Sbjct: 156 MHAARALQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPVGATPQ 215
Query: 337 YDL-----SRVTIPILLYSGGADFFTDSRDVTRLEMSLPNL 372
D+ + T P+L+ G ++ ++ S P +
Sbjct: 216 VDMWPLFDALATRPLLVLRGETSDILSAQTAAKMA-SRPGV 255
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 45.4 bits (108), Expect = 1e-05
Identities = 37/257 (14%), Positives = 77/257 (29%), Gaps = 43/257 (16%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
P VL +HG L + ++A+ L+ GY V + G + H
Sbjct: 24 PEHPVVLCIHGILEQGLAWQ-----EVALPLAAQGYRVVAPDLFG-HGRSSH---LEMVT 74
Query: 199 NFWKFSFHEMGLYDLPAFVD---FILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKI 255
+ Y F+ ++ + L+GHS + + S+RP+ +++
Sbjct: 75 S-----------YSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKEL 123
Query: 256 NLFVGMAPFVFASHLRQGPLLEFLIKSVSNL-----VPSI----------NGYFPSGTSL 300
L P + L + +S+ P + S
Sbjct: 124 ILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAIPSLSEEFSY 183
Query: 301 YTMAHLIDLYRQRRFCQFD-YGRDQNLLR----YNSEEPPDYDLSRVTIPILLYSGGADF 355
+ + +D R +++L L + +P L G +
Sbjct: 184 ILAQRITQPNQGGVRWSWDAIIRTRSILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSK 243
Query: 356 FTDSRDVTRLEMSLPNL 372
D+ + +M++
Sbjct: 244 LNRPEDLQQQKMTMTQA 260
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 45.1 bits (107), Expect = 2e-05
Identities = 37/271 (13%), Positives = 72/271 (26%), Gaps = 70/271 (25%)
Query: 138 QEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAED 197
+ G VL++HGF S L L GY ++G H
Sbjct: 13 EAGERAVLLLHGFTGNSADVR-----MLGRFLESKGYTCHAPIYKG------H---GVPP 58
Query: 198 ENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINL 257
E + D+ +F+ ++ G+ K+ + G S + + P I
Sbjct: 59 EELVHTGPDDW-WQDVMNGYEFLKNK-GYEKIAVAGLSLGGVFSLKLGYTVP-----IEG 111
Query: 258 FVGMAP--FVFASHLRQGPLLEFLIKSVSNLVPSINGYFP-----SGTSLYTMAHLIDLY 310
V M ++ + +LE+ + S T + T+ L +L
Sbjct: 112 IVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMKTLKALQELI 171
Query: 311 RQ-RRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSL 369
R L + P + D + +
Sbjct: 172 ADVRD-----------------------HLDLIYAPTFVVQARHDEMINPDSANII---- 204
Query: 370 PNLIGSHVLTTYNHFDFVISSDTKEVFYDDM 400
++ + S + +Y+
Sbjct: 205 --------------YNEIESPVKQIKWYEQS 221
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 45.2 bits (107), Expect = 2e-05
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 24/140 (17%)
Query: 114 YKSEEHKVTTE-DGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEA 172
K + +S + P G P VL +HG+ LVR A
Sbjct: 4 AKLSS--IEIPVGQDELSGTLLTP--TGMPGVLFVHGWGGSQHHSLVR-----AREAVGL 54
Query: 173 GYDVWLSNFRGNYN-GKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGF--MKM 229
G + RG+ ++T L D+ A D + +
Sbjct: 55 GCICMTFDLRGHEGYASMRQSVTRAQN-----------LDDIKAAYDQLASLPYVDAHSI 103
Query: 230 TLLGHSFSNAIIMIMTSLRP 249
++G S+ + ++T RP
Sbjct: 104 AVVGLSYGGYLSALLTRERP 123
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 44.7 bits (105), Expect = 3e-05
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 23/113 (20%)
Query: 143 PVLVMHGFLACSETFLV----RGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
P++++HG + V G + L + G V+++N G + N E
Sbjct: 10 PIILVHGLTGTDKYAGVLEYWYGIQE---DLQQRGATVYVANLSG-FQSDDGPNGRGEQ- 64
Query: 199 NFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEY 251
L A+V +L TG K+ L+GHS + ++ P+
Sbjct: 65 --------------LLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDL 103
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 43.6 bits (102), Expect = 4e-05
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 9/161 (5%)
Query: 121 VTTEDGYI--ISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWL 178
V TE + +S+ +P + +L +HG E L L +E G+ +
Sbjct: 3 VRTERLTLAGLSVLARIP-EAPKALLLALHGLQGSKEHIL-----ALLPGYAERGFLLLA 56
Query: 179 SNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSN 238
+ + +G + + +G + V R + + L G S
Sbjct: 57 FDAPRHGEREGPPPSSKSPRYVEEVYRVALGFKEEARRVAEEAERRFGLPLFLAGGSL-G 115
Query: 239 AIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFL 279
A + + + F+G + + L
Sbjct: 116 AFVAHLLLAEGFRPRGVLAFIGSGFPMKLPQGQVVEDPGVL 156
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 44.0 bits (103), Expect = 6e-05
Identities = 33/273 (12%), Positives = 69/273 (25%), Gaps = 44/273 (16%)
Query: 136 PKQEGSPPVLVMHGFLACSETF--LVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINM 193
+ ++ +HG + + + A V L + + G +
Sbjct: 47 SRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNH----GDSAV 102
Query: 194 TAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFM--KMTLLGHSFSNAIIMIMTSLRPEY 251
F++ + D+ L ++GHS + L+P
Sbjct: 103 RNRGRLGTNFNWIDGA-RDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNL 161
Query: 252 NEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSINGYFPSGTSLYTMAHLIDLYR 311
+ L + A + L + NL S+ + + R
Sbjct: 162 FHLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCD--HFANESEYVKYMR 219
Query: 312 QRRFCQ----------FDYG-------------------RDQNLLRYNSEEPPDYD---- 338
F D+ + QNLL Y + +
Sbjct: 220 NGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKMEQAQNLLCYMNMQTFAPFLISN 279
Query: 339 LSRVTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
+ V + G + ++ L+ +L N
Sbjct: 280 VKFVRKRTIHIVGARSNWCPPQNQLFLQKTLQN 312
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 42.2 bits (99), Expect = 1e-04
Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 20/166 (12%)
Query: 118 EHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVW 177
+ + +G + +++ + + HG+ S + K DL S+ GY+V+
Sbjct: 5 QEEFIDVNGTRVFQRKMVTDSNR-RSIALFHGYSFTSMDWD---KADLFNNYSKIGYNVY 60
Query: 178 LSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFI---LHRTGFMKMTLLGH 234
++ G + ++ DL +FI L G + ++G
Sbjct: 61 APDYP------GFGRSASSEKYGIDR-------GDLKHAAEFIRDYLKANGVARSVIMGA 107
Query: 235 SFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLI 280
S ++++ T P+ + I +++ L+
Sbjct: 108 SMGGGMVIMTTLQYPDIVDGIIAVAPAWVESLKGDMKKIRQKTLLV 153
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 42.5 bits (100), Expect = 1e-04
Identities = 37/265 (13%), Positives = 77/265 (29%), Gaps = 60/265 (22%)
Query: 139 EGSPP-VLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAED 197
E P VL++HGF + LA ++AGY V L +G H
Sbjct: 37 ENGPVGVLLVHGFTGTPHSMR-----PLAEAYAKAGYTVCLPRLKG------H---GTHY 82
Query: 198 ENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINL 257
E+ + +FH+ + + ++ + + + G S + + + P+ +
Sbjct: 83 EDMERTTFHDW-VASVEEGYGWL--KQRCQTIFVTGLSMGGTLTLYLAEHHPD---ICGI 136
Query: 258 FVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSI--NGYFPSGTSLYTMAHLIDLYRQRRF 315
A + L + + ++ + A L+ L R
Sbjct: 137 VPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTASLLQLAR---- 192
Query: 316 CQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPNLIGS 375
L+ L R+ P L++ D + +
Sbjct: 193 ----------LMAQTKA-----KLDRIVCPALIFVSDEDHVVPPGNADII---------- 227
Query: 376 HVLTTYNHFDFVISSDTKEVFYDDM 400
F + S++ + V +
Sbjct: 228 --------FQGISSTEKEIVRLRNS 244
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 42.5 bits (99), Expect = 2e-04
Identities = 39/329 (11%), Positives = 93/329 (28%), Gaps = 93/329 (28%)
Query: 26 SWVLRGQEDLEMGPGVKHSVNVCIAGMLVLSLLPSNEEVTGKRYPLNIKYTYMFLSSKSN 85
++ +DL P + N LS++ E + + K
Sbjct: 309 KYLDCRPQDL---PREVLTTN-----PRRLSIIA--ESI--RDGLATWDNWKHVNCDKLT 356
Query: 86 RSDKMRIDTSNP--WRFNF-----------IDTAALIELWGYKSEEHKVTTEDGYIISLY 132
+ ++ P +R F I T L +W + + +++
Sbjct: 357 TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKS-----DVMVVVNKL 411
Query: 133 --RILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGH 190
L +++ + + + + + L + + Y N ++
Sbjct: 412 HKYSLVEKQPKESTISIPS-IYLELKVKLENEYALHRSIVDH-Y-----NIPKTFDSDDL 464
Query: 191 INMTAEDENFWKFSFH--EMGLYDLPA-----FVDFILHRTGFMKMTL----LGHSFSNA 239
I + + H + + F+DF F++ + + S +
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDF-----RFLEQKIRHDSTAWNASGS 519
Query: 240 IIMIMTSLR----------PEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSNLV-- 287
I+ + L+ P+Y +N +L+FL K NL+
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKYERLVNA-----------------ILDFLPKIEENLICS 562
Query: 288 PSIN----GYFPSGTSLYTMAHLIDLYRQ 312
+ +++ A ++Q
Sbjct: 563 KYTDLLRIALMAEDEAIFEEA-----HKQ 586
Score = 39.1 bits (90), Expect = 0.003
Identities = 67/435 (15%), Positives = 121/435 (27%), Gaps = 126/435 (28%)
Query: 53 LVLSLLPSNEEVTGKRYPLNIKYTYMFLSSKSNRSDKMRIDTSNPWRFNFIDTAALIELW 112
L +LL EE+ K ++ Y FL S P + + + ++
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYKFLMS--------------PIKTEQRQPSMMTRMY 112
Query: 113 GYKSEEHKVTTEDGYIISLY---RILPK-------QEGSP-PVLVMHGFLACSETFLVRG 161
E+ D + + Y R+ P E P +++ G L G
Sbjct: 113 ---IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS-------G 162
Query: 162 KPDLAIM-------LSEAGYDV-WLSNFRGNYNGKGHINMTAED--ENFWKFSFH-EMGL 210
K +A+ + + + WL N N N + E E K + +
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWL-NL-KNCN-------SPETVLEMLQKLLYQIDPNW 213
Query: 211 YDLPAFVDFILHRTGFMK----MTLLGHSFSNAIIMIMTSLRPEYNEK-INLF------- 258
I R ++ L + N +++ L N K N F
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV----LLNVQNAKAWNAFNLSCKIL 269
Query: 259 -----VGMAPFVFASHLRQGPL------------LEFLIK----SVSNLVPSINGYFPS- 296
+ F+ A+ L L+K +L + P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 297 ----GTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDY-----DLS----RVT 343
S+ D ++ + + +L N EP +Y LS
Sbjct: 330 LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL---NVLEPAEYRKMFDRLSVFPPSAH 386
Query: 344 IPILLYS---GGADFFTDSRDVTRLE-MSL------PNLIGSHVLTTYNHFDFVISSDTK 393
IP +L S V +L SL + I + + + + + +
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI----YLELKVKLENE 442
Query: 394 EVFYDDMMEVVAKYQ 408
+ +V Y
Sbjct: 443 YALHR---SIVDHYN 454
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 40.9 bits (96), Expect = 2e-04
Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 21/122 (17%)
Query: 142 PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFW 201
PV+++HG S F + L G+ + ++ K N
Sbjct: 4 NPVVMVHGIGGASFNFA-----GIKSYLVSQGWSR-DKLYAVDFWDKTGTNYNNGPV--- 54
Query: 202 KFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGM 261
L FV +L TG K+ ++ HS A + + K+ V +
Sbjct: 55 -----------LSRFVQKVLDETGAKKVDIVAHSMGGANTLYYIK-NLDGGNKVANVVTL 102
Query: 262 AP 263
Sbjct: 103 GG 104
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase,
biodegradation, catal; HET: PG4; 1.20A {Paucimonas
lemoignei} PDB: 2vtv_A* 2x76_A
Length = 342
Score = 41.8 bits (97), Expect = 3e-04
Identities = 21/164 (12%), Positives = 47/164 (28%), Gaps = 21/164 (12%)
Query: 113 GYKSEEHKVTTEDGYIISL----YRILPKQEGSPPVLVMHGFLACSETFLVRGKP----- 163
G+ + + G+ + + PV+ +HG + +F +
Sbjct: 8 GFVCKGTQTQYAGGFAPGVGYGGFGGGSCTATKTPVIFIHGNGDNAISFDMPPGNVSGYG 67
Query: 164 ----DLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDF 219
+ L GY F Y + + + F+D
Sbjct: 68 TPARSVYAELKARGY-NDCEIFGVTYLSSSEQGSAQYNYHSSTK------YAIIKTFIDK 120
Query: 220 ILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAP 263
+ TG ++ ++ HS + + T + F+ +A
Sbjct: 121 VKAYTGKSQVDIVAHSMG-VSMSLATLQYYNNWTSVRKFINLAG 163
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 41.5 bits (97), Expect = 3e-04
Identities = 36/254 (14%), Positives = 72/254 (28%), Gaps = 46/254 (18%)
Query: 116 SEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGF--LACSETFLVRGKPDLAIMLSEAG 173
+ V T G I + +R EG+P + + G + ++ F ++ L +
Sbjct: 21 LNKEMVNTLLGPIYTCHR-----EGNPCFVFLSGAGFFSTADNFA-----NIIDKLPD-S 69
Query: 174 YDVWLSNFRGNYNGKGHINMTAEDENFWKFSFH-EMGLYDLPAFVDFI---LHRTGFMKM 229
+ + +S L +V+ I F
Sbjct: 70 IGILTIDAPN-----------------SGYSPVSNQANVGLRDWVNAILMIFEHFKFQSY 112
Query: 230 TLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQG-----PLLEFLIKSVS 284
L HS + + + + F+G+ P + P L + +
Sbjct: 113 LLCVHSIGGFAALQIMNQSS---KACLGFIGLEPTTVMIYRAGFSSDLYPQLALRRQKLK 169
Query: 285 NLVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNS----EEPPDYDLS 340
+N S ++ L+R +CQ Q+L + E
Sbjct: 170 TAADRLNYLKDLSRSHFSSQQFKQLWRGYDYCQRQLNDVQSLPDFKIRLALGEEDFKTGI 229
Query: 341 RVTIPILLYSGGAD 354
IP +++S
Sbjct: 230 SEKIPSIVFSESFR 243
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 41.2 bits (96), Expect = 5e-04
Identities = 34/269 (12%), Positives = 75/269 (27%), Gaps = 52/269 (19%)
Query: 109 IELWGYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLV-MHGFLACSETFLVRGKPDLAI 167
+ Y ++ ++ E G I + L + PV++ G +
Sbjct: 161 AKKSKYIIKQLEIPFEKGKITAHLH-LTNTDKPHPVVIVSAGLDSLQTDMWRL----FRD 215
Query: 168 MLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGF- 226
L++ + + G+ + E++ + A ++ +
Sbjct: 216 HLAKHDIAMLTVDMPSV----GYSSKYPLTEDYSR---------LHQAVLNELFSIPYVD 262
Query: 227 -MKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSVSN 285
++ L+G F ++ ++ L E IK+
Sbjct: 263 HHRVGLIGFRFGGNAMVRLSFLEQE----------------------------KIKACVI 294
Query: 286 LVPSINGYFPSGTSLYTM-AHLIDLYRQRRFCQF--DYGRDQNLLRYNSEEPPDYDLSRV 342
L I+ F S L M +D+ R Y + ++ + +
Sbjct: 295 LGAPIHDIFASPQKLQQMPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKT 354
Query: 343 TIPILLYSGGADFFTDSRDVTRLEMSLPN 371
+PIL S D + D +
Sbjct: 355 KVPILAMSLEGDPVSPYSDNQMVAFFSTY 383
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase
fold, structural genomics, structural G of pathogenic
protozoa consortium; 2.20A {Trypanosoma brucei}
Length = 335
Score = 40.8 bits (95), Expect = 5e-04
Identities = 31/243 (12%), Positives = 66/243 (27%), Gaps = 27/243 (11%)
Query: 143 PVLVMHGFLACSETFL-VRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFW 201
VL + G +E+ L +LA L + + G G
Sbjct: 40 CVLWVGGQ---TESLLSFDYFTNLAEEL-QGDWAFVQVEVPSGKIGSGP----------- 84
Query: 202 KFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGM 261
H D+ + +L ++ L S ++ + + I +
Sbjct: 85 --QDHAHDAEDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLE-NSAHKSSITRVILH 141
Query: 262 APFVFASHLRQGP-LLEFLIKSVSNLVPSINGY-FPSGTSLYTMAHLIDLYRQRRFCQFD 319
+ P + V L+ G + Y + I R F
Sbjct: 142 GVVCDPENPLFTPEGCAARKEHVEKLMAEGRGEDSLAMLKHYDIP--ITPARLAGGG-FP 198
Query: 320 YGRDQNLLRYNSEEPPDY--DLSRVTIPILLYSGGAD-FFTDSRDVTRLEMSLPNLIGSH 376
++ +E + + +P+LL + +V + + + G +
Sbjct: 199 TLQEAVWNPCIRKEFDVLRRSVGVIKVPLLLMLAHNVQYKPSDEEVGTVLEGVRDHTGCN 258
Query: 377 VLT 379
+T
Sbjct: 259 RVT 261
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate
inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa}
SCOP: c.69.1.18
Length = 285
Score = 40.0 bits (93), Expect = 7e-04
Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 19/110 (17%)
Query: 142 PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFW 201
P+++ HG L V + L G V + + + E
Sbjct: 8 YPIVLAHGMLGFDNILGVDYWFGIPSALRRDGAQV----YVTEVSQLDTSEVRGE----- 58
Query: 202 KFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEY 251
L V+ I+ +G K+ L+GHS I + ++RP+
Sbjct: 59 ----------QLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDL 98
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 39.7 bits (93), Expect = 0.001
Identities = 40/253 (15%), Positives = 81/253 (32%), Gaps = 47/253 (18%)
Query: 132 YRILPKQEGS--PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKG 189
R Q P++++HG + V LA L +++ + R
Sbjct: 5 IRAQTAQNQHNNSPIVLVHGLFGSLDNLGV-----LARDLVN-DHNIIQVDVRN------ 52
Query: 190 HINMTAEDENFW--KFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSL 247
H + ++ M DL +D + K T +GHS +M +T+L
Sbjct: 53 H------GLSPREPVMNYPAMA-QDLVDTLDAL----QIDKATFIGHSMGGKAVMALTAL 101
Query: 248 RPEYNEKINLFVGMAPFVFASHLRQGPLLEFL-------IKSVSNLVPSINGYFPS-GTS 299
P+ +K+ + + +AP V R + + ++ + + G
Sbjct: 102 APDRIDKL-VAIDIAP-VDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVI 159
Query: 300 LYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYD-LSRVTIPILLYSGGADFFTD 358
+ + +D + RF + +L ++ + P L GG +
Sbjct: 160 QFLLKSFVD--GEWRF-------NVPVLWDQYPHIVGWEKIPAWDHPALFIPGGNSPYVS 210
Query: 359 SRDVTRLEMSLPN 371
+ L P
Sbjct: 211 EQYRDDLLAQFPQ 223
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 39.8 bits (93), Expect = 0.001
Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 27/154 (17%)
Query: 77 YMFLSSKSNRSDKMRIDTSNPWRFNFIDTAALIELWGYKSEEHKVTTEDGYIISLYRILP 136
+S S + + + P + S V + DG + Y +
Sbjct: 296 VTSHTSLSTPPRIVSLPSGEPLLEG--GLPEDLRRSIAGSRLVWVESFDGSRVPTYVLES 353
Query: 137 KQEGSP-PVLVM-HG--FLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRG--NYNGKGH 190
+ +P P +V+ HG F S+++ A + + AG+ V + N+RG Y G+
Sbjct: 354 GRAPTPGPTVVLVHGGPFAEDSDSW----DTFAASLAA-AGFHVVMPNYRGSTGY-GE-- 405
Query: 191 INMTAEDENFWKFSFHEMG---LYDLPAFVDFIL 221
+ + L D+ A +
Sbjct: 406 --------EWRLKIIGDPCGGELEDVSAAARWAR 431
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 39.6 bits (92), Expect = 0.001
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 21/131 (16%)
Query: 109 IELWGYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVM-HGFLACSETFLVRGKPDLAI 167
L +E H++ DG + +Y +P+ G P ++M G + E +
Sbjct: 120 APLLSPPAERHELVV-DGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESF-----QMEN 173
Query: 168 MLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFM 227
++ + G + G E F A VD +
Sbjct: 174 LVLDRGMATATFDGPGQ------------GEMFEYKRIAGDYEKYTSAVVDLLTKLEAIR 221
Query: 228 --KMTLLGHSF 236
+ +LG S
Sbjct: 222 NDAIGVLGRSL 232
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 40.0 bits (93), Expect = 0.002
Identities = 28/171 (16%), Positives = 47/171 (27%), Gaps = 79/171 (46%)
Query: 270 LRQ-----GPLLEFLIKSVSNLVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQ 324
LR L+ LIK + L +L R + + +
Sbjct: 173 LRDLYQTYHVLVGDLIKFSA-------------------ETLSELIRTTLDAEKVFTQGL 213
Query: 325 NL---LRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPNLIG----SHV 377
N+ L S P L +IPI S P LIG +H
Sbjct: 214 NILEWLENPSNTPDKDYLL--SIPI---------------------SCP-LIGVIQLAHY 249
Query: 378 LTT-----YNHFDF------------------VIS-SDTKEVFYDDMMEVV 404
+ T + + I+ +D+ E F+ + + +
Sbjct: 250 VVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAI 300
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 39.0 bits (91), Expect = 0.002
Identities = 38/267 (14%), Positives = 81/267 (30%), Gaps = 52/267 (19%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
+ L +HG + S FL R + + + AG V + G + G + +D
Sbjct: 44 DAEHTFLCLHGEPSWS--FLYR---KMLPVFTAAGGRVVAPDLFG-F---GRSDKPTDDA 94
Query: 199 NFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKI--- 255
+ L AF+D + ++TL+ + + + + RP+ +++
Sbjct: 95 VYTFGFHRR----SLLAFLDAL----QLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVM 146
Query: 256 -----------NLFVGMAPFVFAS-HLRQGPLLEFLIKSVSNLVPSINGY---FPSG--- 297
F FV S L G L++ I +++ + Y FP
Sbjct: 147 NTALAVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAE--VAAYDAPFPGPEFK 204
Query: 298 TSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFT 357
+ ++ + + + + P + G D
Sbjct: 205 AGVRRFPAIVPITPDMEGAEIGRQAMSFWST------------QWSGPTFMAVGAQDPVL 252
Query: 358 DSRDVTRLEMSLPNLIGSHVLTTYNHF 384
+ L ++ ++ HF
Sbjct: 253 GPEVMGMLRQAIRGCPEPMIVEAGGHF 279
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 38.9 bits (91), Expect = 0.002
Identities = 22/171 (12%), Positives = 45/171 (26%), Gaps = 12/171 (7%)
Query: 211 YDLPAFVDFI---LHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFA 267
Y+ + D I + L+GHS + + P+ + + P++
Sbjct: 115 YEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVA-IDFTPYIET 173
Query: 268 SH-------LRQGPLLEFLIKSVSNLVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDY 320
+ G L IK+V + P+
Sbjct: 174 EALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASS 233
Query: 321 GRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
R + VT P+L+ G + + + + P+
Sbjct: 234 AAMAQTARGLRSDLVP-AYRDVTKPVLIVRGESSKLVSAAALAKTSRLRPD 283
Score = 28.9 bits (65), Expect = 3.1
Identities = 5/16 (31%), Positives = 8/16 (50%)
Query: 12 PPVLLQHGLCLASDSW 27
P +L HG+ S +
Sbjct: 69 PLMLFFHGITSNSAVF 84
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Length = 208
Score = 37.7 bits (87), Expect = 0.003
Identities = 32/159 (20%), Positives = 51/159 (32%), Gaps = 19/159 (11%)
Query: 112 WGYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSE 171
+ +E+ + G + + E S ++ H T + LA L E
Sbjct: 2 YVMTNEDFLIQGPVGQLEVMITRPKGIEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDE 61
Query: 172 AGYDVWLSNFRGNYNGKGHI-NMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMT 230
G NFRG +G N E E DL A + ++ H +
Sbjct: 62 LGLKTVRFNFRGVGKSQGRYDNGVGEVE-------------DLKAVLRWVEHHWSQDDIW 108
Query: 231 LLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASH 269
L G SF I + + + + +AP VF
Sbjct: 109 LAGFSFGAYISAKVAYDQK-----VAQLISVAPPVFYEG 142
Score = 26.9 bits (59), Expect = 9.9
Identities = 11/72 (15%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 336 DYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPNLIGSHVLTTYNHFDFVISSDTKEV 395
L+++ P L+ G D V + + + V++ +HF F
Sbjct: 143 FASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQISSPVEFVVMSGASHF-FH-------G 194
Query: 396 FYDDMMEVVAKY 407
++ E++ +
Sbjct: 195 RLIELRELLVRN 206
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 37.9 bits (88), Expect = 0.004
Identities = 43/248 (17%), Positives = 79/248 (31%), Gaps = 35/248 (14%)
Query: 132 YRILPKQEGS-PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGH 190
Y + ++ + +L+MHG C+ T+ +L++AGY V + G
Sbjct: 36 YLDVAPKKANGRTILLMHGKNFCAGTWE-----RTIDVLADAGYRVIAVDQVG------- 83
Query: 191 INMTAEDENFWKFSFHEMGLYDLPAFVDFI---LHRTGFMKMTLLGHSFSNAIIMIMTSL 247
F K S Y L R G + +++GHS + L
Sbjct: 84 ---------FCKSSKPAHYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALL 134
Query: 248 RPEYNEKINLFVGMAPFVF-ASHLRQGPLLEFLIKSVSNLVPSINGY--------FPSGT 298
P E++ L + + A + + ++ + + I Y
Sbjct: 135 YPRQVERLVLVNPIGLEDWKALGVPWRSVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPE 194
Query: 299 SLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTD 358
+ +YR + + +P Y+L R+ +P LL G D
Sbjct: 195 FDRWVQMQAGMYRGKGRESVAWNSALT-YDMIFTQPVVYELDRLQMPTLLLIGEKDNTAI 253
Query: 359 SRDVTRLE 366
+D E
Sbjct: 254 GKDAAPAE 261
Score = 27.5 bits (61), Expect = 8.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 6 PKYANSPPVLLQHGLCLASDSW 27
PK AN +LL HG + +W
Sbjct: 41 PKKANGRTILLMHGKNFCAGTW 62
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 36.8 bits (85), Expect = 0.006
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 20/148 (13%)
Query: 117 EEHKVTTEDGYIISLYRILPKQ-EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYD 175
E + G + LP + VL++HG SET+ G L++AGY
Sbjct: 8 REGTIQV-QGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLG---TLHRLAQAGYR 63
Query: 176 VWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHS 235
+ G GH A G +F+ ++ ++ S
Sbjct: 64 AVAIDLP----GLGHSKEAAAPAPI--------GELAPGSFLAAVVDALELGPPVVISPS 111
Query: 236 FSNAIIMIMTSLRPEYNEKINLFVGMAP 263
S + + ++ FV +AP
Sbjct: 112 LSGMYSLPFLTAPG---SQLPGFVPVAP 136
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 37.1 bits (86), Expect = 0.009
Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 19/147 (12%)
Query: 117 EEHKVTTEDGYIISLYRILPKQEGSPPVLVM-HGFLACSETFLVRGKPDLAIMLSEAGYD 175
+ T G I I PK EG P L+ HG+ + G + + AG+
Sbjct: 83 YDLYFTGVRGARIHAKYIKPKTEGKHPALIRFHGYSS------NSGDWNDKLNYVAAGFT 136
Query: 176 VWLSNFRGN----------YNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTG 225
V + RG + ++ ++ D +++
Sbjct: 137 VVAMDVRGQGGQSQDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPE 196
Query: 226 F--MKMTLLGHSFSNAIIMIMTSLRPE 250
++ ++G S + + +L P
Sbjct: 197 VDEDRVGVMGPSQGGGLSLACAALEPR 223
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 36.2 bits (84), Expect = 0.012
Identities = 44/246 (17%), Positives = 76/246 (30%), Gaps = 35/246 (14%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
+G V+++HG + + + L EAGY V L + G
Sbjct: 34 QGDETVVLLHGSGPGATGWANFSRNIDP--LVEAGYRVILLDCPG--------------- 76
Query: 199 NFWKFSFHEMGLYDLPAFVDFILHRTGFM------KMTLLGHSFSNAIIMIMTSLRPEYN 252
+ K + + K+ LLG+S + T PE
Sbjct: 77 -WGKSDSVVNSGSRSDLNARILK---SVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERV 132
Query: 253 EKINLF--VGMAPFVFASHLRQG--PLLEFLIKSVSNLVPSINGYFPSGTSLYTMAHLID 308
K+ L +F +G L + + + + F TS T A L +
Sbjct: 133 GKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLTDA-LFE 191
Query: 309 LYRQRRFCQFDYGRD-QNLLRYNSEEPPDY--DLSRVTIPILLYSGGADFFTDSRDVTRL 365
+ D+ + L N ++ PD+ L+ + L+ G D F RL
Sbjct: 192 ARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEIKAQTLIVWGRNDRFVPMDAGLRL 251
Query: 366 EMSLPN 371
+
Sbjct: 252 LSGIAG 257
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 36.3 bits (84), Expect = 0.013
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 24/171 (14%)
Query: 113 GYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVM-HGFLACSETFLVRGKPDLAIMLSE 171
G K + I+ + +P +EG P +V HG+ G+ + +
Sbjct: 53 GVKVYRLTYKSFGNARITGWYAVPDKEGPHPAIVKYHGY-----NASYDGEIHEMVNWAL 107
Query: 172 AGYDVWLSNFRG---------NYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILH 222
GY + RG + +G MT + + + + D ++ I
Sbjct: 108 HGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYYRGV-YLDAVRALEVISS 166
Query: 223 RTGF--MKMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLR 271
++ + G S + + +L +A + + S+
Sbjct: 167 FDEVDETRIGVTGGSQGGGLTIAAAALSDI------PKAAVADYPYLSNFE 211
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 36.1 bits (83), Expect = 0.016
Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 38/247 (15%)
Query: 120 KVTTEDGYIISLYRILPKQEGSP-PVLVM-HGFLACSETFLVRGKPDLAIMLSEAGYDVW 177
+ G I + ++PK E P +V G+ RG P + GY +
Sbjct: 72 TFSGYRGQRIKGWLLVPKLEEEKLPCVVQYIGYNG------GRGFPHDWLFWPSMGYICF 125
Query: 178 LSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFS 237
+ + RG +G + E + + + R + + + S
Sbjct: 126 VMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAAS 185
Query: 238 NAIIMIMTSLRPEYNEKINLFV-------GMAPFVFASHLRQGPLLEFLIKSVSNLVPSI 290
P+ +++ + + G+A V A + K++ VP +
Sbjct: 186 ----------FPQVDQE-RIVIAGGSQGGGIALAVSALSKK--------AKALLCDVPFL 226
Query: 291 NGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYS 350
+ + F + +++ + R S +R IP L
Sbjct: 227 CHF----RRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARAKIPALFSV 282
Query: 351 GGADFFT 357
G D
Sbjct: 283 GLMDNIC 289
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 36.2 bits (83), Expect = 0.018
Identities = 35/248 (14%), Positives = 69/248 (27%), Gaps = 33/248 (13%)
Query: 109 IELWGYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIM 168
++ + +V E + Y I+ + + ++V+ G E L
Sbjct: 128 VDNSKIPLKSIEVPFEGELL-PGYAIISEDKAQDTLIVVGGGDTSREDLF----YMLGYS 182
Query: 169 LSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMK 228
E Y+V + + G ++ F + A +D+ T K
Sbjct: 183 GWEHDYNVLMVDLPG----------QGKNP-NQGLHFEVDARAAISAILDWYQAPTE--K 229
Query: 229 MTLLGHSFSNAIIMIMTSLRPEYNEKINL--FVGMAPFVFASHLRQGPLLEFLIKSVSNL 286
+ + G S I +A S + ++K S L
Sbjct: 230 IAIAGFSGGGYFTAQAVEKDKRIKAWIASTPIYDVAEVFRISFSTALKAPKTILKWGSKL 289
Query: 287 VPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPI 346
V S+N + Y F + E+ D +++ +P
Sbjct: 290 VTSVNKVAEVNLNKYAWQ-------------FGQVDFITSVNEVLEQAQIVDYNKIDVPS 336
Query: 347 LLYSGGAD 354
L G +
Sbjct: 337 LFLVGAGE 344
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 34.7 bits (80), Expect = 0.042
Identities = 37/246 (15%), Positives = 69/246 (28%), Gaps = 40/246 (16%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
+P V+ +HG + T+ + + L E V L GH
Sbjct: 79 GSAPRVIFLHGGGQNAHTWDT-----VIVGLGEPALAVDLPGH-------GH-------- 118
Query: 199 NFWKFSFH-EMGLYDLPAFVD---FILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEK 254
S E G Y + +L ++G S + + ++ P+ +
Sbjct: 119 -----SAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGE 173
Query: 255 INLFVGMAPFVFASHLRQ--GPLLEFLIKSVSNLVPSIN-------GYFPSGTSLYTMAH 305
+ + V + P H + PS P
Sbjct: 174 L-VLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRG 232
Query: 306 LIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRL 365
+ R+ + + D + D D+ ++ PI L GG+ F +D L
Sbjct: 233 VFHNSRRLDNGNWVWRYDAIRTFGDFAGLWD-DVDALSAPITLVRGGSSGFVTDQDTAEL 291
Query: 366 EMSLPN 371
+
Sbjct: 292 HRRATH 297
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural
mycobacterium tuberculosis structural proteomics
project, X hydrolase; 2.10A {Mycobacterium tuberculosis}
PDB: 2zjf_A*
Length = 356
Score = 34.6 bits (79), Expect = 0.056
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 31/140 (22%)
Query: 118 EHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLA-------IMLS 170
H++ G I P + P V+++HGF P+ L+
Sbjct: 4 VHRILNCRGTRIHAVADSPPDQQGPLVVLLHGF------------PESWYSWRHQIPALA 51
Query: 171 EAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMT 230
AGY V + RG Y +++ + E+ + D+ +D G +
Sbjct: 52 GAGYRVVAIDQRG-YGR------SSKYRVQKAYRIKEL-VGDVVGVLDSY----GAEQAF 99
Query: 231 LLGHSFSNAIIMIMTSLRPE 250
++GH + + L P+
Sbjct: 100 VVGHDWGAPVAWTFAWLHPD 119
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 33.5 bits (77), Expect = 0.11
Identities = 40/253 (15%), Positives = 74/253 (29%), Gaps = 48/253 (18%)
Query: 139 EGSPPVLVM-HGFLACSET---FLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMT 194
G+ ++M HG + + P + AGY V L + G
Sbjct: 30 AGNGETVIMLHGGGPGAGGWSNYYRNVGPFVD-----AGYRVILKDSPG----------- 73
Query: 195 AEDENFWKFSFHEMGLYDLPAFVDFILHRTGFM------KMTLLGHSFSNAIIMIMTSLR 248
F K M + G M + L+G++ A +
Sbjct: 74 -----FNKSDAVVMDEQRGLVNARAVK---GLMDALDIDRAHLVGNAMGGATALNFALEY 125
Query: 249 PEYNEKINLF--VGMAPFVFASHLRQG--PLLEFLIK-SVSNLVPSINGYFPSGTSLYTM 303
P+ K+ L G+ P +FA +G L + + S L + + + +
Sbjct: 126 PDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI--T 183
Query: 304 AHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDY-----DLSRVTIPILLYSGGADFFTD 358
L+ + Q +N L + P L + + G D F
Sbjct: 184 EELLQGRWEA--IQRQPEHLKNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVP 241
Query: 359 SRDVTRLEMSLPN 371
+L ++ +
Sbjct: 242 LDHGLKLLWNIDD 254
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 33.4 bits (77), Expect = 0.11
Identities = 41/234 (17%), Positives = 69/234 (29%), Gaps = 31/234 (13%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
EG VL++ G L ET +L + + V + R G+ + D
Sbjct: 21 EGDHAVLLLPGMLGSGETDFGPQLKNLN----KKLFTVVAWDPR------GYGHSRPPDR 70
Query: 199 NFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKINLF 258
+F F D + + F K++LLG S +I + P Y K+ +
Sbjct: 71 DFPADFFERDAK-DAVDLMKAL----KFKKVSLLGWSDGGITALIAAAKYPSYIHKM-VI 124
Query: 259 VGMAPFVFASHLRQGPLLEFLIKSVSNLVPSINGYFPSGTSLYTMAHLIDLYRQ-RRFCQ 317
G +V + + K + + T +D RQ +
Sbjct: 125 WGANAYVTDEDSMIYEGIRDVSKWSERTRKPLEALYGYDYFARTCEKWVDGIRQFKHLPD 184
Query: 318 FDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
+ R L RV P L+ G D + +
Sbjct: 185 GNICRH--------------LLPRVQCPALIVHGEKDPLVPRFHADFIHKHVKG 224
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 32.8 bits (75), Expect = 0.14
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 16/109 (14%)
Query: 142 PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFW 201
P + V+HG + L G D G+ V + RG+ G +D +
Sbjct: 26 PALFVLHGGPGGNAYVLREGLQDYL-----EGFRVVYFDQRGS----GRSLELPQDPRLF 76
Query: 202 KFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPE 250
L + G + LL H F + + + P+
Sbjct: 77 TVD-------ALVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ 118
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Length = 223
Score = 32.6 bits (74), Expect = 0.15
Identities = 26/159 (16%), Positives = 55/159 (34%), Gaps = 14/159 (8%)
Query: 117 EEHKVT-TEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYD 175
+E+ V+ + + ++P + VL HG + + R +A +L +AG
Sbjct: 11 QEYAVSVSVGEVKLKGNLVIPNG-ATGIVLFAHGSGSSRYSPRNR---YVAEVLQQAGLA 66
Query: 176 VWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGF--MKMTLLG 233
L + + + + + L D++ H +K+ G
Sbjct: 67 TLLIDLLTQEEEEIDLRTRHLRFDI------GLLASRLVGATDWLTHNPDTQHLKVGYFG 120
Query: 234 HSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQ 272
S ++ + RPE + + + G P + S L
Sbjct: 121 ASTGGGAALVAAAERPETVQAV-VSRGGRPDLAPSALPH 158
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 32.7 bits (75), Expect = 0.19
Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 39/272 (14%)
Query: 107 ALIELWGYKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLA 166
+ LW + + ++T G ++ PP++++HG L S + D +
Sbjct: 36 ESLSLWPVRCKSFYISTRFGQT--HVIASGPEDA-PPLVLLHGALFSSTMWY-PNIADWS 91
Query: 167 IMLSEAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGF 226
+ Y + + G N + + + +++L
Sbjct: 92 -----SKYRTYAVDII------GDKNKSIPEN----------VSGTRTDYANWLL---DV 127
Query: 227 M------KMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLI 280
K ++G S M PE + + ++P L
Sbjct: 128 FDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAI---LSPAETFLPFHHDFYKYALG 184
Query: 281 KSVSNLVPSINGYFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLS 340
+ SN V + + + ++ + ++ Q D +L
Sbjct: 185 LTASNGVETFLNWMMNDQNVLH-PIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELR 243
Query: 341 RVTIPILLYSGGADFFTDSRDVT-RLEMSLPN 371
+PILL G + D R +P+
Sbjct: 244 SARVPILLLLGEHEVIYDPHSALHRASSFVPD 275
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 32.3 bits (74), Expect = 0.20
Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 24/101 (23%)
Query: 138 QEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVW---LSNFRGNYNGKGHINMT 194
+P V+++HG L + + L+ L G
Sbjct: 13 TARTPLVVLVHGLLGSGADWQP-----VLSHLARTQCAALTLDLPGH-------GT---N 57
Query: 195 AEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHS 235
E +F E + + V H T + + L+G+S
Sbjct: 58 PERHC---DNFAEA-VEMIEQTVQ--AHVTSEVPVILVGYS 92
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 32.3 bits (74), Expect = 0.24
Identities = 34/270 (12%), Positives = 75/270 (27%), Gaps = 44/270 (16%)
Query: 114 YKSEEHKVTTEDGYIISLYRILPKQEGSPPVLVM-HGFLACSETFL--VRGKPDLAIMLS 170
++ + G Y + G +++ HG A +E+ P LA
Sbjct: 13 ERAYVERFVNAGGVETR-YL----EAGKGQPVILIHGGGAGAESEGNWRNVIPILA---- 63
Query: 171 EAGYDVWLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFM--- 227
Y V + G + + Y + + F+
Sbjct: 64 -RHYRVIAMDMLG-----------------FGKTAKPDIEYTQDRRIRHLH---DFIKAM 102
Query: 228 ----KMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASHLRQGPLLEFLIKSV 283
K++++G+S A + ++ L E + L +G A V H P++ + +
Sbjct: 103 NFDGKVSIVGNSMGGATGLGVSVLHSELVNALVL-MGSAGLVVEIHEDLRPIINYDF-TR 160
Query: 284 SNLVPSING--YFPSGTSLYTMAHLIDLYRQRRFCQFDYGRDQNLLRYNSEEPPDYDLSR 341
+V + + + Q + + +
Sbjct: 161 EGMVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRK 220
Query: 342 VTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
V +P L+ G D + + +
Sbjct: 221 VQVPTLVVQGKDDKVVPVETAYKFLDLIDD 250
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 31.3 bits (70), Expect = 0.58
Identities = 33/257 (12%), Positives = 66/257 (25%), Gaps = 41/257 (15%)
Query: 117 EEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDV 176
H V T G + PK + P + H ++ + +
Sbjct: 12 HTHSVETPYGSVTFTVYGTPKPKR-PAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVR 70
Query: 177 WLSNFRGNYNGKGHINMTAEDENFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSF 236
+ G + S ++ +P + ++ F + +G
Sbjct: 71 VHVDAPG-----MEEGAPVFPLGYQYPSLDQLAD-MIPCILQYL----NFSTIIGVGVGA 120
Query: 237 SNAIIMIMTSLRPEYNEK---INLFVGMAPFVFASHLRQGPLLEFLIKSVSNLVPSINGY 293
I+ P+ E IN+ ++ + + L + + +
Sbjct: 121 GAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPDMI------LGHL 174
Query: 294 FPSGTSLYTMAHLIDLYRQR-----------RFCQFDYGR-DQNLLRYNSEEPPDYDLSR 341
F L + LI YR + R D N R +
Sbjct: 175 FSQEE-LSGNSELIQKYRGIIQHAPNLENIELYWNSYNNRRDLNFER--------GGETT 225
Query: 342 VTIPILLYSGGADFFTD 358
+ P++L G D
Sbjct: 226 LKCPVMLVVGDQAPHED 242
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-biology; 2.30A {Bacteroides fragilis}
Length = 398
Score = 31.3 bits (70), Expect = 0.65
Identities = 12/86 (13%), Positives = 24/86 (27%), Gaps = 15/86 (17%)
Query: 113 GYKSEEHKVTTEDGYIISLYRILPKQEG--SPPVLVMHGFLACSETFLVR---------- 160
GY+ E+ + + + ++P P +L + G E
Sbjct: 89 GYRLEKWEFYPLPKCVSTFLVLIPDNINKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDR 148
Query: 161 ---GKPDLAIMLSEAGYDVWLSNFRG 183
K A+ + GY +
Sbjct: 149 YKDPKLTQALNFVKEGYIAVAVDNPA 174
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 30.1 bits (68), Expect = 1.1
Identities = 35/265 (13%), Positives = 78/265 (29%), Gaps = 38/265 (14%)
Query: 139 EGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGKGHINMTAEDE 198
+ L +HG S +L R + + +E+G V +F G + G + ++E
Sbjct: 45 DAEDVFLCLHGEPTWS--YLYR---KMIPVFAESGARVIAPDFFG-F---GKSDKPVDEE 95
Query: 199 NFWKFSFHEMGLYDLPAFVDFILHRTGFMKMTLLGHSFSNAIIMIMTSLRPEYNEKI--- 255
++ L A ++ + +TL+ + + + + P +++
Sbjct: 96 DYTFEFHRN----FLLALIERL----DLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIM 147
Query: 256 --NLFVGMAPFVFASHLRQGPLLEFLI---KSVSNLVPSINGYFPSGTSLYTMAHLIDLY 310
L S P F V+ ++ + T Y
Sbjct: 148 NAXLMTDPVTQPAFSAFVTQPADGFTAWKYDLVTPSDLRLDQFMKRWAPTLT-EAEASAY 206
Query: 311 RQ-----------RRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDS 359
R+F + RDQ + ++E + + + G D
Sbjct: 207 AAPFPDTSYQAGVRKFPKMVAQRDQAXIDISTEAISFW-QNDWNGQTFMAIGMKDKLLGP 265
Query: 360 RDVTRLEMSLPNLIGSHVLTTYNHF 384
+ ++ + + HF
Sbjct: 266 DVMYPMKALINGCPEPLEIADAGHF 290
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa
armigera} SCOP: c.56.5.1 d.58.3.1
Length = 433
Score = 29.8 bits (67), Expect = 1.9
Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 15/91 (16%)
Query: 215 AFVDFILHRTGFMKMTLLGHSFSNAIIMIM-----TSLRPEYNEKINLFVGMAPFVFASH 269
D I M + L HSF + MI+ L + + V MA +
Sbjct: 287 VIRDIIAEHRNRMALYLDIHSFGS---MILYGYGNGVLPSNALQLHLIGVQMAQAIDRVK 343
Query: 270 LRQGPLLEFLIKSVSNLVPSINGYFPSGTSL 300
++++ ++ +++ Y SG +
Sbjct: 344 WSSNK--DYIVGNIFHVL-----YAASGGAS 367
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 29.6 bits (67), Expect = 1.9
Identities = 49/275 (17%), Positives = 79/275 (28%), Gaps = 49/275 (17%)
Query: 117 EEHKVTTEDGYIISLYRILPKQEGS-PPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYD 175
+ + T G Y + +G PP+ V H + ++ Y
Sbjct: 4 TTNIIKTPRGKFE--YFL----KGEGPPLCVTHLYSEYNDNGN-TFANPFT-----DHYS 51
Query: 176 VWLSNFRGNYNGKGHINMTAEDENFWKFS--FHEMGLYDLPAFVDFI---LHRTGFMKMT 230
V+L N +G G S Y + + + K
Sbjct: 52 VYLVNLKG-C-GN---------------SDSAKNDSEYSMTETIKDLEAIREALYINKWG 94
Query: 231 LLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPFVFASH----LRQGPLLEFLIKSVSNL 286
GHS + ++ + E KI + A +ASH + I S+ N
Sbjct: 95 FAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASHKDSIYCSKNVKFNRIVSIMNA 154
Query: 287 VPSINGYFPSGTSLYTMAHLIDLYRQRRF-----CQFDYGRDQNLLRYNS-EEPPDYD-- 338
+ + +L L+ Y + + N L Y E DYD
Sbjct: 155 LNDDSTVQEERKALSREWALMSFYSEEKLEEALKLPNSGKTVGNRLNYFRQVEYKDYDVR 214
Query: 339 --LSRVTIPILLYSGGADFFTDSRDVTRLEMSLPN 371
L V IP +Y G D + +PN
Sbjct: 215 QKLKFVKIPSFIYCGKHDVQCPYIFSCEIANLIPN 249
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D
structure, serine esterase, HYD aromatic hydrocarbons,
catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A*
1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A
1ggv_A*
Length = 236
Score = 29.2 bits (66), Expect = 2.3
Identities = 10/64 (15%), Positives = 23/64 (35%), Gaps = 9/64 (14%)
Query: 115 KSEEHKVTTEDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRG--KPDLAIMLSEA 172
+E + + DG+ P + +P +++ + F V + + L +
Sbjct: 2 LTEGISIQSYDGHTFGALVGSPAKAPAPVIVIAQ------DIFGVNAFMR-ETVSWLVDQ 54
Query: 173 GYDV 176
GY
Sbjct: 55 GYAA 58
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 29.2 bits (66), Expect = 2.4
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 132 YRILPKQEGSPPVLVM-HGFLACSETF 157
Y+ + VLV HGFL+ S T+
Sbjct: 6 YKFYEANVETNQVLVFLHGFLSDSRTY 32
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 28.8 bits (65), Expect = 2.8
Identities = 25/181 (13%), Positives = 53/181 (29%), Gaps = 35/181 (19%)
Query: 211 YDLPAFVDFILHRTGFM------KMTLLGHSFSNAIIMIMTSLRPEYNEKINLFVGMAPF 264
Y ++VD I+ G M K ++G++F + + E +++ L +G A
Sbjct: 76 YSKDSWVDHII---GIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVL-MGAAGT 131
Query: 265 VF------ASHLRQGPLLEFLIKSVSNLV--PS------INGYFPSGTSLYTMAHLIDLY 310
F + P +E + + S + + ++
Sbjct: 132 RFDVTEGLNAVWGYTPSIENMRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMF 191
Query: 311 RQRRFCQFDYGRDQNLLRYNSEEPPDYDLSRVTIPILLYSGGADFFTDSRDVTRLEMSLP 370
+ R ++ D D+ + L+ G D RL +
Sbjct: 192 PEPRQ-----------RWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELID 240
Query: 371 N 371
Sbjct: 241 R 241
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 29.0 bits (65), Expect = 2.9
Identities = 18/77 (23%), Positives = 24/77 (31%), Gaps = 15/77 (19%)
Query: 117 EEHKVTTEDGYIISLYRILPKQ-------EGSPPVLVM-HG--FLACSETFLVRGKPDLA 166
+ T DG I + P + PP +VM HG D+A
Sbjct: 392 QIRTFTAPDGREIHAHIYPPHSPDFTGPADELPPYVVMAHGGPTSRVPAVL----DLDVA 447
Query: 167 IMLSEAGYDVWLSNFRG 183
S G V N+ G
Sbjct: 448 YFTS-RGIGVADVNYGG 463
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design,
bionanotechnology; 3.00A {Streptomyces aureofaciens}
PDB: 4d9j_A
Length = 456
Score = 27.9 bits (62), Expect = 6.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 12 PPVLLQHGLCLASDSW 27
PV+L HG L+ SW
Sbjct: 25 VPVVLIHGFPLSGHSW 40
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative
acetylacetone dioxygenase, structural genomics; HET: MSE
PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Length = 145
Score = 27.3 bits (60), Expect = 6.5
Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Query: 124 EDGYIISLYRILPKQEGSPPVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRG 183
E G +++ GS H + E FL +GK D+ + G +
Sbjct: 41 EMGSWTAIFDCPA---GS--SFAAHVHVGPGEYFLTKGKMDVRGGKAAGGDTAIAPGYGY 95
Query: 184 NYNGKGHINMTAEDENFWKFSFH 206
H + + SF
Sbjct: 96 ESANARHDKTEFPVASEFYMSFL 118
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 27.7 bits (62), Expect = 6.7
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 31/115 (26%)
Query: 132 YRILPKQEGSP---PVLVMHGFLACSETFLVRGKPDLAIMLSEAGYDVWLSNFRGNYNGK 188
++ + P P++V+HG + ++ ++A + E G V + G G
Sbjct: 42 VQVTTPENAQPHALPLIVLHGGPGMAHNYV----ANIAALADETGRTVIHYDQVG--CGN 95
Query: 189 GHINMTAEDENFWKFSFH----EMGLYDLPAFVDFI---LHRTGFMKMTLLGHSF 236
S H + FVD G + +LG S+
Sbjct: 96 ---------------STHLPDAPADFWTPQLFVDEFHAVCTALGIERYHVLGQSW 135
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP:
c.69.1.12
Length = 273
Score = 27.7 bits (62), Expect = 7.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 12 PPVLLQHGLCLASDSW 27
P++ HG L +DSW
Sbjct: 20 QPIVFSHGWPLNADSW 35
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 27.4 bits (61), Expect = 7.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 12 PPVLLQHGLCLASDSW 27
PV+L HG L+ SW
Sbjct: 28 KPVVLIHGWPLSGRSW 43
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 27.3 bits (61), Expect = 8.5
Identities = 5/16 (31%), Positives = 6/16 (37%)
Query: 12 PPVLLQHGLCLASDSW 27
PPV+L G
Sbjct: 24 PPVVLVGGALSTRAGG 39
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 27.2 bits (61), Expect = 8.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 12 PPVLLQHGLCLASDSW 27
PVL HG L +D W
Sbjct: 20 KPVLFSHGWLLDADMW 35
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 27.2 bits (61), Expect = 8.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 12 PPVLLQHGLCLASDSW 27
PV+ HG L++D W
Sbjct: 22 LPVVFHHGWPLSADDW 37
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 27.4 bits (61), Expect = 8.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 12 PPVLLQHGLCLASDSW 27
PV+L HG L SW
Sbjct: 24 QPVVLIHGYPLDGHSW 39
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 27.2 bits (61), Expect = 9.2
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 12 PPVLLQHGLCLASDSW 27
P + HG L++D W
Sbjct: 23 PVIHFHHGWPLSADDW 38
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 27.3 bits (61), Expect = 9.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 12 PPVLLQHGLCLASDSW 27
PV+L HG L+ SW
Sbjct: 24 QPVVLIHGFPLSGHSW 39
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.424
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,410,905
Number of extensions: 384404
Number of successful extensions: 967
Number of sequences better than 10.0: 1
Number of HSP's gapped: 907
Number of HSP's successfully gapped: 92
Length of query: 409
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 313
Effective length of database: 4,021,377
Effective search space: 1258691001
Effective search space used: 1258691001
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.3 bits)