RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10122
(330 letters)
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein
structure initiative, structural genomics consortium,
SGC, alternative splicing; HET: A3P; 1.80A {Homo
sapiens} SCOP: c.37.1.5
Length = 296
Score = 196 bits (501), Expect = 2e-61
Identities = 56/182 (30%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 61 TIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
+YV RN KD VSYYH ++ G +E++F+ F++G V +G +++HV +WE
Sbjct: 125 KFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHVKGWWE-- 182
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYE 178
++ ILFL YED+K+D K I++ +F+ + + ++ SFE MKEN TN
Sbjct: 183 MKDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRS 242
Query: 179 LVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLD 238
V + + +FMR G +G WK T + + D + + G S+
Sbjct: 243 TVSKSILDQ--------SISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEGT-SINFS 293
Query: 239 FE 240
E
Sbjct: 294 ME 295
Score = 40.5 bits (95), Expect = 4e-04
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
EDI D K I++ +F+ + + ++ SFE MKEN
Sbjct: 195 EDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENP 237
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu
genomics, protein structure initiative, center for
eukaryot structural genomics; 1.90A {Arabidopsis
thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Length = 326
Score = 196 bits (501), Expect = 5e-61
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 62 IIYVTRNPKDTCVSYYHHCQ---LLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
I+Y RNPKD VS +H + E E + F +G GPFW+H+LE+W AS
Sbjct: 157 IVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDHILEYWYAS 216
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQ-LEDHLSFESMKENRATNY 177
+ NP +LF+ YE++KK + ++R +FL+ + ++ + SFES+
Sbjct: 217 RENPNKVLFVTYEELKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNLEVNKE 276
Query: 178 ELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+ E F R G+IGGW+ ++ ++ ++D ++ G
Sbjct: 277 GKL-----------PNGIETKTFFRKGEIGGWRDTLSESLAEEIDRTIEEKFKG 319
Score = 42.9 bits (101), Expect = 8e-05
Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQ-LEDHLSFESMKEN 323
E++ + +++ +FL+ + ++ + SFES+
Sbjct: 229 EELKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNL 271
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND;
1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A*
2qp3_A* 2qp4_A* 1efh_A*
Length = 293
Score = 194 bits (495), Expect = 2e-60
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RNP+D VS Y + + ++E++F+ F G V +G +++H+ +
Sbjct: 124 VIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDHIHGWMP--M 181
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
R +N L L YE++K+D I++ +FL L ++ + + SF+SMKEN+ +NY L
Sbjct: 182 REEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSL 241
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+ + +R G G WK T + D ++ +A
Sbjct: 242 LSVDYVVDK---------TQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKMAD 284
Score = 46.9 bits (112), Expect = 3e-06
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
E++ D I++ +FL L ++ + + SF+SMKEN
Sbjct: 193 EELKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKEN 234
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural
genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens}
PDB: 2h8k_A*
Length = 305
Score = 193 bits (493), Expect = 4e-60
Identities = 58/173 (33%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 61 TIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
I+YV RNPKD VSYYH ++ N E+F++ F+ G V G +++HV +W
Sbjct: 134 KIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWA-- 191
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYE 178
++ IL+L YED+KKD K I++ KFL+ +S + ++ H SF+ MK+N TNY
Sbjct: 192 AKDMHRILYLFYEDIKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNYT 251
Query: 179 LVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+ +++ FMR G G WK T + + D + +AG
Sbjct: 252 TLPTSIMDHS--------ISPFMRKGMPGDWKNYFTVAQNEEFDKDYQKKMAG 296
Score = 40.5 bits (95), Expect = 4e-04
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
EDI D K I++ KFL+ +S + ++ H SF+ MK+N
Sbjct: 204 EDIKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNP 246
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA
pesticide, structural genomics, structural genomics
consort transferase; HET: A3P PCI; 1.80A {Homo sapiens}
PDB: 2ad1_A*
Length = 298
Score = 193 bits (492), Expect = 6e-60
Identities = 60/182 (32%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 61 TIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
IIYV RNPKD VSYYH ++ G +E++F+ FL G VC+G + EHV +WE
Sbjct: 127 KIIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKVCWGSWHEHVKGWWE-- 184
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYE 178
++ IL+L YEDMKK+ K IQ+ +F+ L + ++ + SF+ MK+N NY
Sbjct: 185 AKDKHRILYLFYEDMKKNPKHEIQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYS 244
Query: 179 LVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLD 238
+ ++ FMR G +G WK T + + D K + +
Sbjct: 245 SIPAEIMDH--------SISPFMRKGAVGDWKKHFTVAQNERFDEDYKKKMTDT-RLTFH 295
Query: 239 FE 240
F+
Sbjct: 296 FQ 297
Score = 44.8 bits (106), Expect = 1e-05
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
ED+ + K IQ+ +F+ L + ++ + SF+ MK+N
Sbjct: 197 EDMKKNPKHEIQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNP 239
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform
A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens}
SCOP: c.37.1.5
Length = 350
Score = 193 bits (493), Expect = 2e-59
Identities = 54/182 (29%), Positives = 90/182 (49%), Gaps = 12/182 (6%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RNP+D VS YH+ ++ G + F + FL G V FG +++H+ +
Sbjct: 127 VIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLR--M 184
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
+ +N LF+ YE++++DL+ ++R FL PL + + H +F +MK N +NY L
Sbjct: 185 KGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTL 244
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLDF 239
+ ++ RGAF+R G G WK T S D + + G + D
Sbjct: 245 LPPSLLDH--------RRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRKQMRGMPTFPWDE 296
Query: 240 EP 241
+P
Sbjct: 297 DP 298
Score = 41.8 bits (98), Expect = 2e-04
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
E++ DL+ +++ FL PL + + H +F +MK N
Sbjct: 196 EELQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANT 238
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine,
sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB:
2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Length = 295
Score = 191 bits (487), Expect = 2e-59
Identities = 60/181 (33%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 62 IIYVTRNPKDTCVSYYHHCQL--LEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
IIYV RN KD VSYY+ Q+ + G +E+F + F+ G V FGP+++HV +WE K
Sbjct: 125 IIYVARNAKDVVVSYYYFYQMAKIHPEPGTWEEFLEKFMAGQVSFGPWYDHVKSWWE--K 182
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
R IL+L YEDMK++ K IQ+ KFL+ + + ++ H SF MKEN + NY
Sbjct: 183 RKEYRILYLFYEDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTT 242
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLDF 239
+++ ++ FMR G G WK T + + + ++
Sbjct: 243 MMKEEMDH--------SVSPFMRKGISGDWKNQFTVAQYEKFEEDYVKKMEDS-TLKFRS 293
Query: 240 E 240
E
Sbjct: 294 E 294
Score = 42.0 bits (99), Expect = 1e-04
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
ED+ + K IQ+ KFL+ + + ++ H SF MKEN
Sbjct: 194 EDMKENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKEN 235
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta
estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus
musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A*
1g3m_A*
Length = 297
Score = 191 bits (487), Expect = 2e-59
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RN KD VSYY+ ++ +F +F + F+ G V +G +++HV +WE K
Sbjct: 127 MIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQGQVPYGSWYDHVKAWWE--K 184
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
+LF+ YEDMK+D++ + + +FL+ S + ++ H SF+ MK N +TNY +
Sbjct: 185 SKNSRVLFMFYEDMKEDIRREVVKLIEFLERKPSAELVDRIIQHTSFQEMKNNPSTNYTM 244
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+ E + FMR G IG WK + + D K +
Sbjct: 245 MPEEMMNQ--------KVSPFMRKGIIGDWKNHFPEALRERFDEHYKQQMKD 288
Score = 42.5 bits (100), Expect = 1e-04
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
ED+ D++ + + +FL+ S + ++ H SF+ MK N
Sbjct: 196 EDMKEDIRREVVKLIEFLERKPSAELVDRIIQHTSFQEMKNN 237
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform
B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A
{Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Length = 299
Score = 191 bits (487), Expect = 3e-59
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 12/179 (6%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RNP+D VS YH+ ++ G + F + FL G V FG +++H+ +
Sbjct: 129 VIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLR--M 186
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
+ +N LF+ YE++++DL+ ++R FL PL + + H +F +MK N +NY L
Sbjct: 187 KGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTL 246
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLD 238
+ ++ RGAF+R G G WK T S D + + G + D
Sbjct: 247 LPPSLLDH--------RRGAFLRKGVCGDWKNHFTVAQSEAFDRAYRKQMRGMPTFPWD 297
Score = 41.3 bits (97), Expect = 2e-04
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
E++ DL+ +++ FL PL + + H +F +MK N
Sbjct: 198 EELQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANT 240
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'-
diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda}
SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Length = 351
Score = 192 bits (490), Expect = 3e-59
Identities = 68/172 (39%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
++Y+ R+P+D VS +HH +LL + NF+DF+++F GL P++EHV E W K
Sbjct: 180 MVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHRGLYTLTPYFEHVKEAWA--K 237
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
R+ N+LFL YED KDL I R FL LS I +L +HL+FE K N A N E
Sbjct: 238 RHDPNMLFLFYEDYLKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNNGAVNMED 297
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
EI + F+R GK G W+ EM+ Q + W KDNL
Sbjct: 298 YREIGILA--------DGEHFIRKGKAGCWRDYFDEEMTKQAEKWIKDNLKD 341
Score = 46.1 bits (109), Expect = 8e-06
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
ED + DL I + FL LS I +L +HL+FE K N
Sbjct: 249 EDYLKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNN 290
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive
cooperativity, two substrate binding sites; HET: A3P
NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A*
3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A*
3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Length = 295
Score = 186 bits (474), Expect = 2e-57
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 13/182 (7%)
Query: 61 TIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
++YV RN KD VSYYH + G ++ F + F+ G V +G +++HV E+WE
Sbjct: 124 KVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWE-- 181
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYE 178
+L+L YEDMK++ K IQ+ +F+ H L + + H SF+ MK+N TNY
Sbjct: 182 LSRTHPVLYLFYEDMKENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYT 241
Query: 179 LVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLD 238
V + +++ FMR G G WK T + + D + +AG S+
Sbjct: 242 TVPQEFMDHS--------ISPFMRKGMAGDWKTTFTVAQNERFDADYAEKMAGC-SLSFR 292
Query: 239 FE 240
E
Sbjct: 293 SE 294
Score = 41.7 bits (98), Expect = 2e-04
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
ED+ + K IQ+ +F+ H L + + H SF+ MK+N
Sbjct: 194 EDMKENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKNP 236
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human
cytosolic sulfotransferase, resveratrol, SGC, cytoplasm,
lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens}
PDB: 2z5f_A*
Length = 298
Score = 184 bits (468), Expect = 2e-56
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 13/182 (7%)
Query: 61 TIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
+IY+ RN KD VSYYH + + + G +E++ + FL G V +G ++ HV +W+
Sbjct: 127 KMIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKK- 185
Query: 119 KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYE 178
+ ILFL YEDMK++ K I++ +FL+ L+ + ++ H SFE MK+N NY
Sbjct: 186 -KEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYT 244
Query: 179 LVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLD 238
+ ++ + FMR G G WK T + + D + ++ ++
Sbjct: 245 HLPTTVMDH--------SKSPFMRKGTAGDWKNYFTVAQNEKFDAIYETEMSKT-ALQFR 295
Query: 239 FE 240
E
Sbjct: 296 TE 297
Score = 41.7 bits (98), Expect = 1e-04
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQ 324
ED+ + K I++ +FL+ L+ + ++ H SFE MK+N
Sbjct: 197 EDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNP 239
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural
genomics conso transferase; 2.24A {Homo sapiens}
Length = 284
Score = 176 bits (449), Expect = 1e-53
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RNPKD VSYY + L YRG F++F + F++ + +G ++EHV EFWE
Sbjct: 128 VIYMARNPKDLVVSYYQFHRSLRTMSYRGTFQEFCRRFMNDKLGYGSWFEHVQEFWE--H 185
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
R N+LFLKYEDM +DL +++++ +FL + L +H ++ N E
Sbjct: 186 RMDSNVLFLKYEDMHRDLVTMVEQLARFLGVSCDKAQLEALTEHC---HQLVDQCCNAEA 242
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAGYLSMVLDF 239
+ + G++G WK + T M+ + DL K + + DF
Sbjct: 243 L-------------------PVGRGRVGLWKDIFTVSMNEKFDLVYKQKMGKC-DLTFDF 282
Query: 240 E 240
Sbjct: 283 Y 283
Score = 40.1 bits (94), Expect = 5e-04
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKENQH 325
ED+ DL ++++Q +FL + L +H +
Sbjct: 197 EDMHRDLVTMVEQLARFLGVSCDKAQLEALTEHCHQLVDQCCNA 240
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti
complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured
soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Length = 319
Score = 174 bits (444), Expect = 1e-52
Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 34/204 (16%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFL------------DGLVCFGPFWE 109
++Y+ RNP+D +S + DF + F+ G V G + E
Sbjct: 119 VLYLVRNPRDMLLSSMRMASISRDDVEKSRDFARKFIANEGLGWNALGAGGGVGLGSWPE 178
Query: 110 HVLEFWEASK--RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPD--ILQLEDHLS 165
+V + E+S ++L ++YED+K D + +FLD I + +
Sbjct: 179 NVRSWTESSSDRFPNADVLTMRYEDLKGDPVARFSEIVEFLDLGGPVDIEDIRRAVAAST 238
Query: 166 FESMKENRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNE--------- 216
E M+E + + + A M G GG + E
Sbjct: 239 LERMRELEKRSEQQGGGSPIRHG---------DARMMKGGPGGARPQFVGEGRYDQSLSF 289
Query: 217 MSNQVDLWTKDNLAGYLSMVLDFE 240
+ ++ ++ L G L +
Sbjct: 290 LGEDIESDYQELLHGDSGFALYAK 313
Score = 40.1 bits (94), Expect = 6e-04
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPD--ILQLEDHLSFESMKEN 323
ED+ D + + +FLD I + + E M+E
Sbjct: 202 EDLKGDPVARFSEIVEFLDLGGPVDIEDIRRAVAASTLERMREL 245
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston
bacterial structural genomics initiative, BSGI, UN
function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A
2ovf_A*
Length = 288
Score = 165 bits (421), Expect = 2e-49
Identities = 24/178 (13%), Positives = 60/178 (33%), Gaps = 15/178 (8%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDG--------LVCFGPFWEHVLE 113
++ + RNP+D +S + + F+ G + E++
Sbjct: 103 VVCLIRNPRDAMLSLMRMKGIPPEDVEACRKIAETFIADEGFSSVRIWAGEGSWPENIRS 162
Query: 114 FWEASKRN--PENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKE 171
+ ++ + +L ++YED++KD + + + FL+ + + + E M+E
Sbjct: 163 WTDSVHESFPNAAVLAVRYEDLRKDPEGELWKVVDFLELGGR-DGVADAVANCTLERMRE 221
Query: 172 NRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNL 229
+ L E + ++ F+ G M +++
Sbjct: 222 MEERSKLL----GLETTGLMTRGGKQLPFVGKGGQRKSLKFMGDDIEKAYADLLHGET 275
Score = 40.0 bits (94), Expect = 6e-04
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
ED+ D + + + FL+ + + + E M+E
Sbjct: 182 EDLRKDPEGELWKVVDFLELGGR-DGVADAVANCTLERMREM 222
>3uan_A Heparan sulfate glucosamine 3-O-sulfotransferase; alpha/beta motif,
CO-FACT PAPS/PAP, heparan sulfate oligosaccharides,
golgi-localized transferase; HET: A3P NGY BDP SGN IDS;
1.84A {Mus musculus} PDB: 1vkj_A* 1zrh_A*
Length = 269
Score = 49.4 bits (117), Expect = 4e-07
Identities = 16/153 (10%), Positives = 45/153 (29%), Gaps = 15/153 (9%)
Query: 39 KIFLDGLGTYTRDLIHCRQICNT-----IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDF 93
++ ++ Y +I + ++ + R+P + +S Y +
Sbjct: 76 QLTVEKTPAYFTSPKVPERIHSMNPTIRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPP 135
Query: 94 FKIFLDGLVCFGPFWEHV--------LEFWEASKRNPENILFLKYEDMKKDLKSIIQRTG 145
+ L ++ + + W +I + + + +D IQ+
Sbjct: 136 IEDLLMRDGRLNLDYKALNRSLYHAHMLNWLRFF-PLGHIHIVDGDRLIRDPFPEIQKVE 194
Query: 146 KFLD-HPLSTPDILQLEDHLSFESMKENRATNY 177
+FL P F ++++
Sbjct: 195 RFLKLSPQINASNFYFNKTKGFYCLRDSGKDRC 227
>2z6v_A Putative uncharacterized protein; sulfotransferase, unknown
function; HET: PLM; 2.60A {Mycobacterium avium}
Length = 414
Score = 49.9 bits (118), Expect = 5e-07
Identities = 24/179 (13%), Positives = 59/179 (32%), Gaps = 18/179 (10%)
Query: 17 CVSYYHHCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHCRQICNT--------------I 62
Y E + ++ K +L L + + ++ +
Sbjct: 209 PTDRYARWLFDEADMSSTYEYQKRYLQVLQSTAPGSWSLKMPSHSVHIEALLKVFPDARL 268
Query: 63 IYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKR-- 120
I+ R+P S + +L + N E + + L + + ++ ++
Sbjct: 269 IWAHRDPYKATGSLCNLWRLPQSLVMNTELLDQTEMGRLAMW--QMRYHVDRPLRARERI 326
Query: 121 NPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
E + Y +M +D +++R ++ D PL+ ++ + L+ Y L
Sbjct: 327 GDERFFHMYYHEMMRDPMDVMRRIYEWADEPLTAETEARMRNWLAHHPQDRFALNAYRL 385
Score = 28.7 bits (63), Expect = 3.2
Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 12/89 (13%)
Query: 6 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDF-----FKIFLDGLGTYTRDLIHCRQICN 60
+I+ R+P S + +L + N E ++ + + + + R+
Sbjct: 268 LIWAHRDPYKATGSLCNLWRLPQSLVMNTELLDQTEMGRLAMWQMRYHVDRPLRARERIG 327
Query: 61 -----TIIY--VTRNPKDTCVSYYHHCQL 82
+ Y + R+P D Y
Sbjct: 328 DERFFHMYYHEMMRDPMDVMRRIYEWADE 356
>1nst_A NST1, heparan sulfate N-deacetylase/N-sulfotransferase; PAP,
haparin sulfate, haparin sulfate biosynthesis,
glycoprotein; HET: A3P; 2.30A {Homo sapiens} SCOP:
c.37.1.5
Length = 325
Score = 49.5 bits (117), Expect = 6e-07
Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 19/122 (15%)
Query: 62 IIYVTRNPKDTCVSYYHH-------------CQLLEGYRGNFEDFFKIFLDGLVCFGPFW 108
++ + NP D S+Y H + + + + + G +
Sbjct: 142 VLTILINPADRAYSWYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYA 201
Query: 109 EHVLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFES 168
H+ + A + IL L + ++ + ++ KFL + + L+F+
Sbjct: 202 THIERWLSA--YHANQILVLDGKLLRTEPAKVMDMVQKFLGV----TNTIDYHKTLAFDP 255
Query: 169 MK 170
K
Sbjct: 256 KK 257
>3ap1_A Protein-tyrosine sulfotransferase 2; sulfotransferase fold,
transferase; HET: A3P; 1.90A {Homo sapiens} PDB: 3ap2_A*
3ap3_A*
Length = 337
Score = 48.7 bits (116), Expect = 9e-07
Identities = 12/88 (13%), Positives = 28/88 (31%), Gaps = 8/88 (9%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKRN 121
+ + R+ + + S + G+ + D L + E + +
Sbjct: 156 FLLMVRDGRASVHSMITRKVTIAGF------DLSSYRDCLTKWNKAIEVMYAQCM--EVG 207
Query: 122 PENILFLKYEDMKKDLKSIIQRTGKFLD 149
E L + YE + + ++ FL
Sbjct: 208 KEKCLPVYYEQLVLHPRRSLKLILDFLG 235
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 48.9 bits (116), Expect = 2e-06
Identities = 52/302 (17%), Positives = 95/302 (31%), Gaps = 117/302 (38%)
Query: 65 VTRNPKDTCVSYYHHCQLLEGYRG-----NFEDF-FKIFLDGLVCFGPFWEHVLEFWEAS 118
V NP + + G +G N+ F+ +DG + ++ + E ++
Sbjct: 1665 VINNPVNLTI-------HFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINE--HST 1715
Query: 119 K---RNPENILFL--------------KYEDMKKDLKSIIQRTGKFLDHPL-------ST 154
R+ + +L +ED+K K +I F H L S
Sbjct: 1716 SYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKS--KGLIPADATFAGHSLGEYAALASL 1773
Query: 155 PDILQLED--HLSFE---------SMKENRATNYELV-IEINKENNLIDKEKCERGAFMR 202
D++ +E + F E +NY ++ I + +E + R
Sbjct: 1774 ADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVV-ER 1832
Query: 203 SGKIGGWKALMTNEMSNQVDLWTKDNLAG--YLSMVLDFEPISGQSTDGTRILNTQFISP 260
GK GW E+ N N+ Y V +G R L+T
Sbjct: 1833 VGKRTGWLV----EIVN-------YNVENQQY---V-----AAGD----LRALDT----- 1864
Query: 261 FRTGYVRCKGVCMPEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESM 320
+++N +K +Q+ DI++L+ LS E +
Sbjct: 1865 --------------------VTNVLNFIK--LQKI-----------DIIELQKSLSLEEV 1891
Query: 321 KE 322
+
Sbjct: 1892 EG 1893
Score = 42.3 bits (99), Expect = 2e-04
Identities = 55/365 (15%), Positives = 115/365 (31%), Gaps = 111/365 (30%)
Query: 8 YVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHC--RQICNTIIYV 65
YV+ + + V Q+L FE+ +L+G D IH ++
Sbjct: 67 YVSSLVEPSKVG--QFDQVLNLCLTEFEN---CYLEG-----ND-IHALAAKLLQENDTT 115
Query: 66 TRNPKDTCVSYYHHCQLLEGYRGNFED--FFKIFLDG----LVCFG------PFWEHVLE 113
K+ +Y + + + F+ +G + FG ++E + +
Sbjct: 116 LVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRD 175
Query: 114 FWEASKRNPENILFLKYEDMKKDLKSIIQRT-------------GKFLDHPLSTPDILQL 160
++ +++ + + L +I+ T ++L++P +TPD
Sbjct: 176 LYQTYHVLVGDLI----KFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPD---- 227
Query: 161 EDHLSFE--SMKENRAT---NYELVIEINKEN--NLIDKEKCERGAFMRSGKIGGWKALM 213
+D+L S +Y + ++ L +GA S + L+
Sbjct: 228 KDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRS---YLKGATGHS------QGLV 278
Query: 214 TNEMSNQVDLWTKDNLAGYLSMVLDFEPISGQSTDGTRILNTQFISPFRTGYVRCKGVCM 273
T A ++ +E +L F G VRC
Sbjct: 279 T---------------AVAIAETDSWESFFVSVRKAITVL-------FFIG-VRCYE-AY 314
Query: 274 PEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTP---------DILQLEDHLSFESMKENQ 324
P + SI++ + L++ P Q++D+++ K N
Sbjct: 315 PNTSLPP---------SILEDS---LENNEGVPSPMLSISNLTQEQVQDYVN----KTNS 358
Query: 325 HIADS 329
H+
Sbjct: 359 HLPAG 363
Score = 32.7 bits (74), Expect = 0.20
Identities = 32/249 (12%), Positives = 64/249 (25%), Gaps = 106/249 (42%)
Query: 9 VTRNPKDTCVSYYHHCQLLEGYRG-----NFEDF-FKIFLDGLGTYTRDLIHCRQICNTI 62
V NP + + G +G N+ F+ +DG + + +
Sbjct: 1665 VINNPVNLTI-------HFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSY 1717
Query: 63 IYVTRNPKDTC------------VSY--YHHCQLLEGYRGNFEDFFKIF----LDG---- 100
+ R+ K + + + L+ +G F L G
Sbjct: 1718 TF--RSEKGLLSATQFTQPALTLMEKAAF---EDLKS-KGLI-PADATFAGHSL-GEYAA 1769
Query: 101 LVCFGPFWEHVLEFWEASK----R-----------------------NPENI-LFLKYED 132
L V+ + R NP + E
Sbjct: 1770 LASLA----DVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEA 1825
Query: 133 MKKDLKSIIQRTGKF----------------------------LDHPLSTP--DILQLED 162
++ ++ + +RTG L+ + DI++L+
Sbjct: 1826 LQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNF-IKLQKIDIIELQK 1884
Query: 163 HLSFESMKE 171
LS E ++
Sbjct: 1885 SLSLEEVEG 1893
Score = 32.3 bits (73), Expect = 0.23
Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 73/239 (30%)
Query: 122 PENILFLKYEDMKKD-LKSIIQRTGKFL--DHPLSTPDILQLEDHLSF--ESMKENRATN 176
P F +++ K + + T F D P + +++ L + ++ ++
Sbjct: 23 PTA-SFFIASQLQEQFNKILPEPTEGFAADDEPTTPAELV--GKFLGYVSSLVEPSKVGQ 79
Query: 177 YELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTN-EMSNQVDLWTKDNL--AGYL 233
++ V+ + L + E ++ I AL N L L
Sbjct: 80 FDQVLNLC----LTEFEN----CYLEGNDI---HALAAKLLQENDTTLVKTKELIKNYIT 128
Query: 234 SMVLDFEPISGQST--------DGTRILNTQFISPFRTGYVRCKG-----VCMPE----Y 276
+ ++ P +S +G L F G G E Y
Sbjct: 129 ARIMAKRPFDKKSNSALFRAVGEGNAQLVAIF------G-----GQGNTDDYFEELRDLY 177
Query: 277 --YVNFAEDIIND----LKSIIQQT-------------GKFLDHPLSTPDILQLEDHLS 316
Y D+I L +I+ T ++L++P +TPD +D+L
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPD----KDYLL 232
Score = 28.9 bits (64), Expect = 2.8
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 17/66 (25%)
Query: 273 MPEYYVNFAEDIINDLKSIIQQTGKFLDH---------PLSTPDILQLEDHL-SFES--M 320
+PE FA D ++ + + GKFL + +L L L FE+ +
Sbjct: 41 LPEPTEGFAAD--DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNL--CLTEFENCYL 96
Query: 321 KENQ-H 325
+ N H
Sbjct: 97 EGNDIH 102
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 47.2 bits (111), Expect = 6e-06
Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 72/196 (36%)
Query: 9 VTRNPKDTCVSYYH---------------HCQLLEGYRG----NFEDFFKIFLDGLGTYT 49
V + PK++ +S H +++ Y + +D +LD Y
Sbjct: 417 VEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ---Y- 472
Query: 50 RDLIHCRQICNTIIYVTRNPKDTCVSY--YH-----HCQLLEGYRGNFEDF-F---KIFL 98
Y S+ +H H + + +R F DF F KI
Sbjct: 473 -------------FY----------SHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 99 DGLVCFGPFWE----HVLEFWEA--SKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPL 152
D L+F++ +P+ YE + + + + + L
Sbjct: 510 DSTAWNASGSILNTLQQLKFYKPYICDNDPK------YERLVNAILDFLPKIEENLICSK 563
Query: 153 STPDILQLEDHLSFES 168
T D+L++ L E
Sbjct: 564 YT-DLLRIA--LMAED 576
Score = 44.5 bits (104), Expect = 4e-05
Identities = 56/358 (15%), Positives = 115/358 (32%), Gaps = 93/358 (25%)
Query: 6 IIYVTRNPKDT-CVSYYHHCQL-LEGYRGNFEDF--FKIFLDGLGTYTRDLIHCRQICNT 61
I+ TR + T +S + L+ + + L L +DL R++ T
Sbjct: 268 ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL--PREVLTT 325
Query: 62 -------IIYVTRNPKDTCVSYYHHCQL-------------LE--GYRGNFEDFFKIFLD 99
I R+ T + H LE YR F+ +F
Sbjct: 326 NPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-VFPP 383
Query: 100 GLVCFGPFWEHVLE-FW-EASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDI 157
+L W + K + ++ + K S++++ K + +S P
Sbjct: 384 SA----HIPTILLSLIWFDVIKSDVMVVV----NKLHK--YSLVEKQPK--ESTISIPS- 430
Query: 158 LQLEDHLSFESMKE-NRA--TNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMT 214
+ LE + E+ +R+ +Y + + ++ + F IG L
Sbjct: 431 IYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPP---YLDQYFYSH--IG--HHLKN 483
Query: 215 NEMSNQVDLWTKDNLAGYLSMVLDFEPI------SGQSTDGT-RILNTQFISPFRTGYVR 267
E ++ L+ + LDF + + + + ILNT + +
Sbjct: 484 IEHPERMTLFRM--------VFLDFRFLEQKIRHDSTAWNASGSILNT--LQQLK----- 528
Query: 268 CKGVCMPEYYVNFAEDIINDLKSIIQQTGKFL----DHPLSTP--DILQLEDHLSFES 319
+Y + D + ++ FL ++ + + D+L++ L E
Sbjct: 529 --------FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIA--LMAED 576
Score = 30.2 bits (67), Expect = 1.2
Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 32/138 (23%)
Query: 19 SYY-----HHCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHCRQICNTIIYVTRNPKDTC 73
Y+ HH + +E F +FLD + + H N + +
Sbjct: 471 QYFYSHIGHHLKNIEHP-ERMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQQ-- 526
Query: 74 VSYYHHCQLLEGYRGNFED---FFKIFLDGLVCFGPFWEHVLEFWEASKRNPE-NI---- 125
L+ Y+ D ++ ++ ++ F P E L + ++
Sbjct: 527 ---------LKFYKPYICDNDPKYERLVNAILDFLPKIEENL------ICSKYTDLLRIA 571
Query: 126 LFLKYEDMKKDLKSIIQR 143
L + E + ++ +QR
Sbjct: 572 LMAEDEAIFEEAHKQVQR 589
>3rnl_A Sulfotransferase; structural genomics, PSI-biology, midwest center
for structu genomics, MCSG, alpha-beta-alpha sandwich;
HET: MSE; 1.75A {Alicyclobacillus acidocaldarius subsp}
Length = 311
Score = 46.0 bits (108), Expect = 7e-06
Identities = 20/148 (13%), Positives = 47/148 (31%), Gaps = 19/148 (12%)
Query: 21 YHHCQLLEGYRGNFEDFF--KIFLDGLGTYTRDLIHCRQICNT-----IIYVTRNPKDTC 73
+ + + Y F+ + + Y +++ + I+ + RNP D
Sbjct: 64 LYTIRDEDAYMRLFDGVRGERAVGEASVFYLFYPGTAQRMYDAYPDAKILIMLRNPVDRA 123
Query: 74 VSYYHHCQLLEGYRGNFEDFFKIFLDGLVCF----------GPFWEHVLEFWEASKRNPE 123
S Y H E +F + + + G + V + + E
Sbjct: 124 FSAYMHLVRDERETLSFRESLAKEEERIRQHYEPLWYYRAVGLYAAQVKRYLDV--FGRE 181
Query: 124 NILFLKYEDMKKDLKSIIQRTGKFLDHP 151
+ + +E+ +D +++ FL
Sbjct: 182 QVKVILFEEFARDPVQVVRDCCAFLGVS 209
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A
{Mycobacterium tuberculosis}
Length = 384
Score = 43.8 bits (102), Expect = 4e-05
Identities = 13/114 (11%), Positives = 26/114 (22%), Gaps = 2/114 (1%)
Query: 51 DLIHCRQICNTIIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEH 110
D + ++ R + S Q +I D + + E
Sbjct: 240 DALMATYPDALVVQTHRPVETIMASMCSLAQHTTEGWSTKFVGAQIGADAMDTWSRGLER 299
Query: 111 VLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHL 164
K + + Y D+ D + + LS +
Sbjct: 300 FNAARA--KYDSAQFYDVDYHDLIADPLGTVADIYRHFGLTLSDEARQAMTTVH 351
>3bd9_A Heparan sulfate glucosamine 3-O-sulfotransferase 5; heparan sulfate
biosynthesis, substrate specificity, glycoprotein, golgi
apparatus, membrane; HET: A3P; 2.30A {Homo sapiens}
Length = 280
Score = 39.8 bits (92), Expect = 7e-04
Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 12/143 (8%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHV---------- 111
++ + R P +S Y + + F+ ++
Sbjct: 112 LLIIVREPTTRAISDYTQVLEGKERKNKTYYKFEKLAIDPNTCEVNTKYKAVRTSIYTKH 171
Query: 112 LEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLD-HPLSTPDILQLEDHLSFESMK 170
LE W E + + + + +Q KFL+ P + L F ++
Sbjct: 172 LERWL-KYFPIEQFHVVDGDRLITEPLPELQLVEKFLNLPPRISQYNLYFNATRGFYCLR 230
Query: 171 ENRATNYELVIEINKENNLIDKE 193
N N L + + +D
Sbjct: 231 FNEIFNKCLAGSKGRIHPEVDPS 253
>1t8t_A Heparan sulfate D-glucosaminyl 3-O- sulfotransferase 3A1;
alpha-beta motif, substrate-binding cleft; HET: A3P CIT;
1.85A {Homo sapiens} SCOP: c.37.1.5 PDB: 1t8u_A*
Length = 271
Score = 31.7 bits (71), Expect = 0.26
Identities = 27/181 (14%), Positives = 43/181 (23%), Gaps = 51/181 (28%)
Query: 6 IIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHCRQICNTIIYV 65
+I V R+P +S Y FE T
Sbjct: 103 LIVVVRDPVTRAISDYTQTLSKRPDIPTFESL-----------------------TFKNR 139
Query: 66 TRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKRNPENI 125
T DT S Y + E + + F +
Sbjct: 140 TAGLIDTSWSAIQIGI----YAKHLEHWLRHF-----------------------PIRQM 172
Query: 126 LFLKYEDMKKDLKSIIQRTGKFLD-HPLSTPDILQLEDHLSFESMKENRATNYELVIEIN 184
LF+ E + D + R FL + T F +K+ ++ +
Sbjct: 173 LFVSGERLISDPAGELGRVQDFLGLKRIITDKHFYFNKTKGFPCLKKAEGSSRPHCLGKT 232
Query: 185 K 185
K
Sbjct: 233 K 233
>1taf_B TFIID TBP associated factor 62; transcription initiation, histone
fold, complex (TWO transcr factors); 2.00A {Drosophila
melanogaster} SCOP: a.22.1.3
Length = 70
Score = 27.5 bits (61), Expect = 1.5
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 281 AEDIINDLKSIIQQTGKFLDHP----LSTPDI 308
AED+ LK I+Q KF++H LS DI
Sbjct: 33 AEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
>2pim_A Phenylacetic acid degradation-related protein; thioesterase
superfamily, phenylacetic acid degradation-RELA protein;
2.20A {Ralstonia eutropha JMP134}
Length = 141
Score = 27.3 bits (61), Expect = 3.6
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 253 LNTQFISPFRTGYVRCKG 270
LN F+ P + G +R +
Sbjct: 88 LNLSFLRPAQAGLLRGRA 105
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer,
oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4
PDB: 1ulj_B* 3en1_B* 3eqq_B
Length = 187
Score = 27.7 bits (61), Expect = 4.4
Identities = 9/68 (13%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Query: 76 YYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKRNPENILFLKYEDMKK 135
YY +LL F+++F + + + F P + A + + ++ +
Sbjct: 30 YYWEAKLLN--DRRFQEWFDLLAEDIHYFMPIRTTRIMRETAQEYSGAREYAHFDDN-AQ 86
Query: 136 DLKSIIQR 143
++ +++
Sbjct: 87 MMRGRLRK 94
>2wp8_J Exosome complex exonuclease DIS3; nucleus, hydrolase, RNA-binding,
exonucle binding, mitochondrion, rRNA processing; 3.00A
{Saccharomyces cerevisiae}
Length = 977
Score = 27.8 bits (62), Expect = 6.4
Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 13/102 (12%)
Query: 106 PFWEHVLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLST---PDILQLED 162
PF + VLE A + + L + + +R D + + P + + D
Sbjct: 470 PFSKKVLECLPAEGHDWKAPTKLDDPEAVSKDPLLTKRK-DLRDKLICSIDPPGCVDIND 528
Query: 163 HLSFESMKENRATNYELVIEIN------KENNLIDKEKCERG 198
L + + N+E+ + I K +D E RG
Sbjct: 529 ALHAKKLPNG---NWEVGVHIADVTHFVKPGTALDAEGAARG 567
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation,
transferase; HET: SAH TYD; 1.40A {Micromonospora
chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A*
4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Length = 416
Score = 27.3 bits (61), Expect = 8.6
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 273 MPEYYV----NFAEDIINDLKSIIQQTGKF 298
P+Y + N AE+I+ + Q G++
Sbjct: 377 YPDYALLFAWNHAEEIMAKEQEFHQAGGRW 406
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.140 0.437
Gapped
Lambda K H
0.267 0.0713 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 5,306,287
Number of extensions: 316174
Number of successful extensions: 738
Number of sequences better than 10.0: 1
Number of HSP's gapped: 659
Number of HSP's successfully gapped: 77
Length of query: 330
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 236
Effective length of database: 4,077,219
Effective search space: 962223684
Effective search space used: 962223684
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (25.8 bits)