RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10122
(330 letters)
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 113 bits (284), Expect = 4e-30
Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 12/180 (6%)
Query: 54 HCRQICNTIIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHV 111
+ +YV RN KD VSYYH ++ G +E++F+ F++G V +G +++HV
Sbjct: 107 SFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHV 166
Query: 112 LEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKE 171
+WE ++ ILFL YED+K+D K I++ +F+ + + ++ SFE MKE
Sbjct: 167 KGWWEM--KDRHQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKE 224
Query: 172 NRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
N TN V + + + +FMR G +G WK T + + D + + G
Sbjct: 225 NPMTNRSTVSKSILDQS--------ISSFMRKGTVGDWKNHFTVAQNERFDEIYRRKMEG 276
Score = 29.0 bits (64), Expect = 0.86
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 274 PEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
+ F EDI D K I++ +F+ + + ++ SFE MKEN
Sbjct: 176 HQILFLFYEDIKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKEN 225
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 111 bits (278), Expect = 6e-29
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 15/182 (8%)
Query: 54 HCRQICNTIIYVTRNPKDTCVSYYHHCQLL---EGYRGNFEDFFKIFLDGLVCFGPFWEH 110
+ I+Y RNPKD VS +H + L E E + F +G GPFW+H
Sbjct: 144 SVKSSSCKIVYCCRNPKDMFVSLWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDH 203
Query: 111 VLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQ-LEDHLSFESM 169
+LE+W AS+ NP +LF+ YE++KK + ++R +FL+ + ++ + SFES+
Sbjct: 204 ILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESL 263
Query: 170 KENRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNL 229
+ + F R G+IGGW+ ++ ++ ++D ++
Sbjct: 264 SNLEVNKEGKLPNGIETKT-----------FFRKGEIGGWRDTLSESLAEEIDRTIEEKF 312
Query: 230 AG 231
G
Sbjct: 313 KG 314
Score = 25.9 bits (56), Expect = 8.0
Identities = 7/43 (16%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 282 EDIINDLKSIIQQTGKFLDHPLSTPDILQ-LEDHLSFESMKEN 323
E++ + +++ +FL+ + ++ + SFES+
Sbjct: 224 EELKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNL 266
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 110 bits (276), Expect = 7e-29
Identities = 56/180 (31%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 54 HCRQICNTIIYVTRNPKDTCVSYYHHCQL--LEGYRGNFEDFFKIFLDGLVCFGPFWEHV 111
++YV RN KD VSYYH + + G ++ F + F+ G V +G +++HV
Sbjct: 110 TLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHV 169
Query: 112 LEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKE 171
E+WE +L+L YEDMK++ K IQ+ +F+ H L + + H SF+ MK+
Sbjct: 170 QEWWEL--SRTHPVLYLFYEDMKENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKK 227
Query: 172 NRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
N TNY V + +++ FMR G G WK T + + D + +AG
Sbjct: 228 NPMTNYTTVPQEFMDHS--------ISPFMRKGMAGDWKTTFTVAQNERFDADYAEKMAG 279
Score = 28.6 bits (63), Expect = 0.91
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 274 PEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
F ED+ + K IQ+ +F+ H L + + H SF+ MK+N
Sbjct: 179 HPVLYLFYEDMKENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKN 228
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 110 bits (275), Expect = 8e-29
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
Query: 53 IHCRQICNTIIYVTRNPKDTCVSYYHHCQLLEGYR--GNFEDFFKIFLDGLVCFGPFWEH 110
+IY+ RNP+D VS Y + ++ + ++E++F+ F G V +G +++H
Sbjct: 106 KSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFLKKPKSWEEYFEWFCQGTVLYGSWFDH 165
Query: 111 VLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMK 170
+ + R +N L L YE++K+D I++ +FL L ++ + + SF+SMK
Sbjct: 166 IHGWMP--MREEKNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMK 223
Query: 171 ENRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLA 230
EN+ +NY L ++ +R G G WK T + D ++ +A
Sbjct: 224 ENKMSNYS---------LLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAEDFDKLFQEKMA 274
Query: 231 G 231
Sbjct: 275 D 275
Score = 28.3 bits (62), Expect = 1.2
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 274 PEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
+ + E++ D I++ +FL L ++ + + SF+SMKEN
Sbjct: 176 KNFLLLSYEELKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKEN 225
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 107 bits (268), Expect = 8e-28
Identities = 54/172 (31%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 62 IIYVTRNPKDTCVSYYHHCQLL--EGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASK 119
+IY+ RN KD VSYYH + + + G +E++ + FL G V +G ++ HV +W+ K
Sbjct: 123 MIYLARNAKDVSVSYYHFDLMNNLQPFPGTWEEYLEKFLTGKVAYGSWFTHVKNWWK--K 180
Query: 120 RNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYEL 179
+ ILFL YEDMK++ K I++ +FL+ L+ + ++ H SFE MK+N NY
Sbjct: 181 KEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTH 240
Query: 180 VIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+ +++ + FMR G G WK T + + D + ++
Sbjct: 241 LPTTVMDHS--------KSPFMRKGTAGDWKNYFTVAQNEKFDAIYETEMSK 284
Score = 28.2 bits (62), Expect = 1.4
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 274 PEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLEDHLSFESMKEN 323
+ ED+ + K I++ +FL+ L+ + ++ H SFE MK+N
Sbjct: 184 HPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDN 233
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 290
Score = 102 bits (254), Expect = 1e-25
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 12/181 (6%)
Query: 53 IHCRQICNTIIYVTRNPKDTCVSYYHHCQLLEGYR--GNFEDFFKIFLDGLVCFGPFWEH 110
+ IIY+ RN KD VS+Y+ ++ G+ G+F +F + F+ G V +G +++H
Sbjct: 113 ASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAGHPNPGSFPEFVEKFMQGQVPYGSWYKH 172
Query: 111 VLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMK 170
V +WE K +LFL YED+K+D++ + + FL+ S + ++ H SF+ MK
Sbjct: 173 VKSWWE--KGKSPRVLFLFYEDLKEDIRKEVIKLIHFLERKPSEELVDRIIHHTSFQEMK 230
Query: 171 ENRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNLA 230
N +TNY + + FMR G G WK T ++ + D + +
Sbjct: 231 NNPSTNYTTLPDEIMNQK--------LSPFMRKGITGDWKNHFTVALNEKFDKHYEQQMK 282
Query: 231 G 231
Sbjct: 283 E 283
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 90.7 bits (224), Expect = 1e-21
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 23 HCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHCRQICNTIIYVTRNPKDTCVSYYHHCQL 82
C+ + G + + + +IY+ RNP+D VS YH+ ++
Sbjct: 86 WCETIVGAFSLPDQYSPRLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKI 145
Query: 83 LEGYR--GNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKRNPENILFLKYEDMKKDLKSI 140
+ G + F + FL G V FG +++H+ + + +N LF+ YE++++DL+
Sbjct: 146 AGQLKDPGTPDQFLRDFLKGEVQFGSWFDHIKGWLR--MKGKDNFLFITYEELQQDLQGS 203
Query: 141 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 200
++R FL PL + + H +F +MK N +NY L+ ++ RGAF
Sbjct: 204 VERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDHR--------RGAF 255
Query: 201 MRSGKIGGWKALMTNEMSNQVDLWTKDNLAG 231
+R G G WK T S D + + G
Sbjct: 256 LRKGVCGDWKNHFTVAQSEAFDRAYRKQMRG 286
Score = 25.6 bits (55), Expect = 9.7
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 254 NTQFISPFRTGYVRCKGVCMPEYYVNFAEDIINDLKSIIQQTGKFLDHPLSTPDILQLED 313
QF S F + + E++ DL+ +++ FL PL + +
Sbjct: 166 EVQFGSWFDHIKGWLRMKGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEALGSVVA 225
Query: 314 HLSFESMKENQ 324
H +F +MK N
Sbjct: 226 HSTFSAMKANT 236
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 90.8 bits (224), Expect = 3e-21
Identities = 68/182 (37%), Positives = 93/182 (51%), Gaps = 12/182 (6%)
Query: 52 LIHCRQICNTIIYVTRNPKDTCVSYYHHCQLLE--GYRGNFEDFFKIFLDGLVCFGPFWE 109
+ ++Y+ R+P+D VS +HH +LL + NF+DF+++F GL P++E
Sbjct: 163 MPPNMLDTVKMVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWEMFHRGLYTLTPYFE 222
Query: 110 HVLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESM 169
HV E W KR+ N+LFL YED KDL I R FL LS I +L +HL+FE
Sbjct: 223 HVKEAWA--KRHDPNMLFLFYEDYLKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKF 280
Query: 170 KENRATNYELVIEINKENNLIDKEKCERGAFMRSGKIGGWKALMTNEMSNQVDLWTKDNL 229
K N A N E EI + F+R GK G W+ EM+ Q + W KDNL
Sbjct: 281 KNNGAVNMEDYREIGILAD--------GEHFIRKGKAGCWRDYFDEEMTKQAEKWIKDNL 332
Query: 230 AG 231
Sbjct: 333 KD 334
>d1nsta_ c.37.1.5 (A:) Heparan sulfate
N-deacetylase/N-sulfotransferase domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 301
Score = 55.3 bits (132), Expect = 3e-09
Identities = 23/168 (13%), Positives = 53/168 (31%), Gaps = 28/168 (16%)
Query: 25 QLLEGYRGNFEDFF----KIFLDGLGTYTRDLIHCRQICNT-----IIYVTRNPKDTCVS 75
+ ++ Y F + + Y + R+ ++ + NP D S
Sbjct: 75 KGIDWYMEFFPIPSNTTSDFYFEKSANYFDSEVAPRRAAALLPKAKVLTILINPADRAYS 134
Query: 76 YYHHCQLLEGYRGNFEDF-------------FKIFLDGLVCFGPFWEHVLEFWEASKRNP 122
+Y H + + F + + + G + H+ + A +
Sbjct: 135 WYQHQRAHDDPVALKYTFHEVITAGSDASSKLRALQNRCLVPGWYATHIERWLSA--YHA 192
Query: 123 ENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMK 170
IL L + ++ + ++ KFL + + L+F+ K
Sbjct: 193 NQILVLDGKLLRTEPAKVMDMVQKFLG----VTNTIDYHKTLAFDPKK 236
>d1t8ta_ c.37.1.5 (A:) Heparan sulfate glucosamine
3-O-sulfotransferase 3 {Human (Homo sapiens) [TaxId:
9606]}
Length = 271
Score = 52.2 bits (124), Expect = 2e-08
Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 15/128 (11%)
Query: 54 HCRQICNTIIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDF-FKIFLDGL-------VCFG 105
+I V R+P +S Y FE FK GL + G
Sbjct: 95 SAMSKDTKLIVVVRDPVTRAISDYTQTLSKRPDIPTFESLTFKNRTAGLIDTSWSAIQIG 154
Query: 106 PFWEHVLEFWEASKRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLS 165
+ +H+ + +LF+ E + D + R FL D H
Sbjct: 155 IYAKHLEHWLR--HFPIRQMLFVSGERLISDPAGELGRVQDFLGLKRIITD-----KHFY 207
Query: 166 FESMKENR 173
F K
Sbjct: 208 FNKTKGFP 215
>d1texa_ c.37.1.5 (A:) Stf0 sulfotransferase {Mycobacterium
smegmatis [TaxId: 1772]}
Length = 265
Score = 49.0 bits (115), Expect = 3e-07
Identities = 15/120 (12%), Positives = 33/120 (27%), Gaps = 7/120 (5%)
Query: 62 IIYVTRNPKDTCVSYYHHCQL---LEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEAS 118
I + VS++ Q + + + E W A
Sbjct: 137 IHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAHVITMLRAQEEGWRAW 196
Query: 119 -KRNPENILFLKYEDMKKDLKSIIQRTGKFLDHPLST---PDILQLEDHLSFESMKENRA 174
+ + Y + ++L ++ + L P + + D S E ++ R
Sbjct: 197 FTEENVEPIDVDYPYLWRNLTEVVGTVLEALGQDPRLAPKPVLERQADQRSDEWVERYRR 256
>d1vkja_ c.37.1.5 (A:) Heparan sulfate 3-O-sulfotransferase {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 258
Score = 46.9 bits (110), Expect = 1e-06
Identities = 18/188 (9%), Positives = 46/188 (24%), Gaps = 59/188 (31%)
Query: 4 AAIIYVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLGTYTRDLIHCRQICNTII 63
++ + R+P + +S Y + + L
Sbjct: 91 IRLLLILRDPSERVLSDYTQVLYNHLQKHKPYPPIEDLL--------------------- 129
Query: 64 YVTRNPKDTCVSYYHHCQLLEGYRGNFEDFFKIFLDGLVCFGPFWEHVLEFWEASKRNPE 123
D + + H+L +
Sbjct: 130 --------------------------MRDGRLNLDYKALNRSLYHAHMLNWLR--FFPLG 161
Query: 124 NILFLKYEDMKKDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEI 183
+I + + + +D IQ+ +FL L ++ + N+ + + +
Sbjct: 162 HIHIVDGDRLIRDPFPEIQKVERFLK----------LSPQINASNFYFNKTKGFYCLRDS 211
Query: 184 NKENNLID 191
K+ L +
Sbjct: 212 GKDRCLHE 219
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 70
Score = 26.2 bits (58), Expect = 1.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Query: 281 AEDIINDLKSIIQQTGKFLDHP----LSTPDI 308
AED+ LK I+Q KF++H LS DI
Sbjct: 33 AEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDI 64
>d1rkta2 a.121.1.1 (A:83-205) Hypothetical transcriptional regulator
YfiR {Bacillus subtilis [TaxId: 1423]}
Length = 123
Score = 25.7 bits (56), Expect = 4.3
Identities = 7/34 (20%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 112 LEFWEASKRNPE--NILFLKYEDMKKDLKSIIQR 143
E+ + RN E L +Y+ + ++Q+
Sbjct: 29 FEYLVTAWRNEERRQYLEKRYDLFVERFSRLLQK 62
>d1xrsa_ c.1.19.4 (A:) D-lysine 5,6-aminomutase alpha subunit, KamD
{Clostridium sticklandii [TaxId: 1511]}
Length = 516
Score = 26.7 bits (59), Expect = 5.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 268 CKGVCMPEYYVNFAEDIIN 286
C G+CMPE A + ++
Sbjct: 237 CSGLCMPEIAAMGAIERLD 255
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.140 0.437
Gapped
Lambda K H
0.267 0.0503 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,338,861
Number of extensions: 65748
Number of successful extensions: 216
Number of sequences better than 10.0: 1
Number of HSP's gapped: 195
Number of HSP's successfully gapped: 39
Length of query: 330
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 244
Effective length of database: 1,226,816
Effective search space: 299343104
Effective search space used: 299343104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (24.7 bits)