BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10123
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q1Z|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap
pdb|1Q20|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap And Pregnenolone
pdb|1Q22|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(sult2b1b) In The Presence Of Dhea And Pap
Length = 299
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ QDL+ ++R FL PL + + H +F +MK N +NY L+ +L+D
Sbjct: 200 LQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLL-----PPSLLDH 254
Query: 64 EKCERGAFMRSGKIG 78
RGAF+R G G
Sbjct: 255 ---RRGAFLRKGVCG 266
>pdb|1Q1Q|A Chain A, Crystal Structure Of Human Pregnenolone Sulfotransferase
(Sult2b1a) In The Presence Of Pap
Length = 350
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ QDL+ ++R FL PL + + H +F +MK N +NY L+ +L+D
Sbjct: 198 LQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLL-----PPSLLDH 252
Query: 64 EKCERGAFMRSGKIG 78
RGAF+R G G
Sbjct: 253 ---RRGAFLRKGVCG 264
>pdb|1Z29|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K+ G+P + + N P R +K HLPL LLP+ L D
Sbjct: 66 DLEKCHRAPIFMRVPFLEFKVPGIP----SGMETLKNTPAPRLLKTHLPLALLPQTLLDQ 121
Query: 117 STKA 120
K
Sbjct: 122 KVKV 125
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ L + + +H SF+ MK+N TNY V ++++ F
Sbjct: 204 IQKILEFVGRSLPEETVDLMVEHTSFKEMKKNPMTNYTTVRREFMDHSI--------SPF 255
Query: 72 MRSGKIG 78
MR G G
Sbjct: 256 MRKGMAG 262
>pdb|2ZPT|X Chain X, Crystal Structure Of Mouse Sulfotransferase Sult1d1
Complex With Pap
pdb|2ZVP|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol
pdb|2ZVQ|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And Alpha-naphthol
pdb|2ZYT|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps
pdb|2ZYU|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps And P-Nitrophenyl Sulfate
pdb|2ZYV|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With PapsPAP AND P-Nitrophenol
pdb|2ZYW|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol, Obtained By
Two-Step Soaking Method
Length = 295
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 62 DKEKCERGAFMRSGKIGGLPVY-VRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
D EKC+R A + L + + + V ++N+P R +K HLP++LLP K
Sbjct: 66 DAEKCKRDAIYKRVPFMELIIPGITNGVEMLNNMPSPRIVKTHLPVQLLPSSFWKNDCK 124
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 9 KSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCER 68
K IQ+ KFL+ + + ++ H SF MKEN + NY +++ ++++
Sbjct: 201 KCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTTMMKEEMDHSV-------- 252
Query: 69 GAFMRSGKIGGL 80
FMR G G
Sbjct: 253 SPFMRKGISGDW 264
>pdb|1FMJ|A Chain A, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FMJ|B Chain B, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FML|A Chain A, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
pdb|1FML|B Chain B, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
Length = 351
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 6 QDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEK 65
+DL I R FL LS I +L +HL+FE K N A N E EI L D E
Sbjct: 253 KDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNNGAVNMEDYREIGI---LADGEH 309
Query: 66 CERGAFMRSGKIGGLPVYVRDSVGHISNLPGRRFIKAHL 104
F+R GK G RD ++IK +L
Sbjct: 310 -----FIRKGKAGCW----RDYFDEEMTKQAEKWIKDNL 339
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 97 RRFIKAHLPLRLLPKKLQD 115
+RF+K HLPL L+P + D
Sbjct: 158 KRFVKTHLPLSLMPPNMLD 176
>pdb|1X8J|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8J|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8K|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8K|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8L|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
pdb|1X8L|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
Length = 351
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 12/99 (12%)
Query: 6 QDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEK 65
+DL I R FL LS I +L +HL+FE K N A N E EI L D E
Sbjct: 253 KDLPGSIARIADFLGKKLSEEQIQRLSEHLNFEKFKNNGAVNMEDYREIGI---LADGEH 309
Query: 66 CERGAFMRSGKIGGLPVYVRDSVGHISNLPGRRFIKAHL 104
F+R GK G RD ++IK +L
Sbjct: 310 -----FIRKGKAGCW----RDYFDEEMTKQAEKWIKDNL 339
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 97 RRFIKAHLPLRLLPKKLQD 115
+RF+K HLPL L+P + D
Sbjct: 158 KRFVKTHLPLSLMPPNMLD 176
>pdb|1Z28|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 66 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 121
Query: 117 STKA 120
K
Sbjct: 122 KVKV 125
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ L + + H SF+ MK+N TNY V + ++++ F
Sbjct: 204 IQKILEFVGRSLPEETVDFVVQHTSFKEMKKNPMTNYTTVPQEFMDHSI--------SPF 255
Query: 72 MRSGKIG 78
MR G G
Sbjct: 256 MRKGMAG 262
>pdb|1LS6|A Chain A, Human Sult1a1 Complexed With Pap And P-Nitrophenol
pdb|2D06|A Chain A, Human Sult1a1 Complexed With Pap And Estradiol
pdb|2D06|B Chain B, Human Sult1a1 Complexed With Pap And Estradiol
Length = 295
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 66 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 121
Query: 117 STKA 120
K
Sbjct: 122 KVKV 125
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ H L + + H SF+ MK+N TNY V + ++++ F
Sbjct: 204 IQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSI--------SPF 255
Query: 72 MRSGKIG 78
MR G G
Sbjct: 256 MRKGMAG 262
>pdb|4GRA|A Chain A, Crystal Structure Of Sult1a1 Bound With Pap
pdb|4GRA|B Chain B, Crystal Structure Of Sult1a1 Bound With Pap
Length = 299
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 70 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 125
Query: 117 STKA 120
K
Sbjct: 126 KVKV 129
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ L + + H SF+ MK+N TNY V + ++++ F
Sbjct: 208 IQKILEFVGRSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSI--------SPF 259
Query: 72 MRSGKIG 78
MR G G
Sbjct: 260 MRKGMAG 266
>pdb|3U3K|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3K|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3M|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And
3-Cyano-7- Hydroxycoumarin
pdb|3U3O|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And Two
3-Cyano-7- Hydroxycoumarin
Length = 315
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 86 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 141
Query: 117 STKA 120
K
Sbjct: 142 KVKV 145
Score = 31.6 bits (70), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ H L + + H SF+ MK+N TNY V + ++++ F
Sbjct: 224 IQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSI--------SPF 275
Query: 72 MRSGKIG 78
MR G G
Sbjct: 276 MRKGMAG 282
>pdb|3U3J|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap
pdb|3U3J|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap
Length = 314
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 86 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 141
Query: 117 STKA 120
K
Sbjct: 142 KVKV 145
Score = 32.0 bits (71), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ H L + + H SF+ MK+N TNY V + ++++ F
Sbjct: 224 IQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSI--------SPF 275
Query: 72 MRSGKIG 78
MR G G
Sbjct: 276 MRKGMAG 282
>pdb|3U3R|A Chain A, Crystal Structure Of D249g Mutated Human Sult1a1 Bound To
Pap And P- Nitrophenol
Length = 315
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGA-FMR----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R FMR K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 86 DLEKCHRAPIFMRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 141
Query: 117 STKA 120
K
Sbjct: 142 KVKV 145
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ H L + + H SF+ MK+N TNY V + +++ F
Sbjct: 224 IQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMGHSI--------SPF 275
Query: 72 MRSGKIG 78
MR G G
Sbjct: 276 MRKGMAG 282
>pdb|1CJM|A Chain A, Human Sult1a3 With Sulfate Bound
pdb|2A3R|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
pdb|2A3R|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
Length = 295
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 30/71 (42%), Gaps = 23/71 (32%)
Query: 62 DKEKCERGAFMRSGKIGGLPVYVR------DSVGHISNL------PGRRFIKAHLPLRLL 109
D EKC R P+YVR + G S L P R IK+HLPL LL
Sbjct: 66 DLEKCNRA-----------PIYVRVPFLEVNDPGEPSGLETLKDTPPPRLIKSHLPLALL 114
Query: 110 PKKLQDGSTKA 120
P+ L D K
Sbjct: 115 PQTLLDQKVKV 125
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 6 QDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEK 65
++++ I++ G+ L P T D + H SF+ MK+N TNY V + ++++
Sbjct: 202 REIQKILEFVGRSL--PEETMDFMV--QHTSFKEMKKNPMTNYTTVPQELMDHSI----- 252
Query: 66 CERGAFMRSGKIG 78
FMR G G
Sbjct: 253 ---SPFMRKGMAG 262
>pdb|3QVU|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVU|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVV|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
pdb|3QVV|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
Length = 295
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query: 62 DKEKCERGAFMR-----SGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
D EKC R K G+P + + + P R +K HLPL LLP+ L D
Sbjct: 66 DLEKCHRAPIFNRVPFLEFKAPGIP----SGMETLKDTPAPRLLKTHLPLALLPQTLLDQ 121
Query: 117 STKA 120
K
Sbjct: 122 KVKV 125
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 12 IQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCERGAF 71
IQ+ +F+ H L + + H SF+ MK+N TNY + + ++++ F
Sbjct: 204 IQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTIPQEIMDHSI--------SPF 255
Query: 72 MRSGKIG 78
MR G G
Sbjct: 256 MRKGMAG 262
>pdb|3CKL|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
pdb|3CKL|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
Length = 298
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 62 DKEKCERGAFMRSGKI--GGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
D EKC+RG + LP + + P R +K HLP LLPK + + K
Sbjct: 68 DIEKCKRGFITEKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCK 127
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 9 KSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCER 68
K I++ +FL+ L+ + ++ H SFE MK+N NY + ++D K
Sbjct: 204 KEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNY-----THLPTTVMDHSK--- 255
Query: 69 GAFMRSGKIGGLPVY 83
FMR G G Y
Sbjct: 256 SPFMRKGTAGDWKNY 270
>pdb|2Z5F|A Chain A, Human Sulfotransferase Sult1b1 In Complex With Pap
pdb|2Z5F|B Chain B, Human Sulfotransferase Sult1b1 In Complex With Pap
Length = 298
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 62 DKEKCERGAFMRSGKI--GGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
D EKC+RG + LP + + P R +K HLP LLPK + + K
Sbjct: 68 DIEKCKRGFITEKVPMLEMTLPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCK 127
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 9 KSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKCER 68
K I++ +FL+ L+ + ++ H SFE MK+N NY + ++D K
Sbjct: 204 KEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNY-----THLPTTVMDHSK--- 255
Query: 69 GAFMRSGKIGGLPVY 83
FMR G G Y
Sbjct: 256 SPFMRKGTAGDWKNY 270
>pdb|1ZD1|A Chain A, Human Sulfortransferase Sult4a1
pdb|1ZD1|B Chain B, Human Sulfortransferase Sult4a1
Length = 284
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 80 LPV--YVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTKA 120
LPV Y + + I L R IK+HLP R LP L +G +K
Sbjct: 86 LPVLEYPQPGLDIIKELTSPRLIKSHLPYRFLPSDLHNGDSKV 128
>pdb|3OP6|A Chain A, Crystal Structure Of An Oligo-Nucleotide Binding Protein
(Lpg1207) From Legionella Pneumophila Subsp. Pneumophila
Str. Philadelphia 1 At 2.00 A Resolution
pdb|3OP6|B Chain B, Crystal Structure Of An Oligo-Nucleotide Binding Protein
(Lpg1207) From Legionella Pneumophila Subsp. Pneumophila
Str. Philadelphia 1 At 2.00 A Resolution
Length = 152
Score = 32.0 bits (71), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 28 ILQLEDHLSFESMKENRAT-NYELVIEINKENNLIDKEKCERGAFMRSGKIGGLPVYVRD 86
+L DH++F +KE T + EL E E + C+ GA G + GLPV V
Sbjct: 59 VLPASDHITFXKLKEAIGTSDLELATESEFEGKFAE---CDVGAXPPFGNLYGLPVLVST 115
Query: 87 SVGHISNL 94
+ N+
Sbjct: 116 KLSAQDNI 123
>pdb|1OV4|A Chain A, Crystal Structure Of Human Dhea-st Complexed With
Androsterone
Length = 293
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 195 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 242
>pdb|1EFH|A Chain A, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
Length = 292
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 187 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 234
>pdb|1J99|A Chain A, Crystal Structure Of Human Dehydroepiandrosterone
Sulfotransferase In Complex With Substrate
Length = 293
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 195 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 242
>pdb|2QP4|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 186 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 233
>pdb|3F3Y|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|C Chain C, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|D Chain D, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
Length = 285
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 187 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 234
>pdb|2QP3|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 6 QDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELV 51
QD I++ +FL L ++ + + SF+SMKEN+ +NY L+
Sbjct: 188 QDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLL 233
>pdb|1AQU|A Chain A, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQU|B Chain B, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQY|A Chain A, Estrogen Sulfotransferase With Pap
pdb|1AQY|B Chain B, Estrogen Sulfotransferase With Pap
pdb|1BO6|A Chain A, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
pdb|1BO6|B Chain B, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
Length = 297
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 1 MLSVHQDLKSIIQRTG----KFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINK 56
+ ++D+K I+R +FL+ S + ++ H SF+ MK N +TNY ++ E
Sbjct: 191 LFMFYEDMKEDIRREVVKLIEFLERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPEEMM 250
Query: 57 ENNLIDKEKCERGAFMRSGKIGGL 80
+ FMR G IG
Sbjct: 251 NQKV--------SPFMRKGIIGDW 266
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 49 ELVIEINKENNLIDKEKCERGAFMRSGKIGGLPVYVRDSVGHISNLPGR---RFIKAHLP 105
E+V I KE D EKC+ A +I L D + I L + R +K HLP
Sbjct: 58 EVVYMIYKEG---DVEKCKEDAIF--NRIPYLECRNEDLINGIKQLKEKESPRIVKTHLP 112
Query: 106 LRLLPKKLQDGSTK 119
+LLP + + K
Sbjct: 113 PKLLPASFWEKNCK 126
>pdb|4IFB|A Chain A, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
pdb|4IFB|B Chain B, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
Length = 285
Score = 29.6 bits (65), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNY 48
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY
Sbjct: 187 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNY 231
>pdb|2H8K|A Chain A, Human Sulfotranferase Sult1c3 In Complex With Pap
pdb|2H8K|B Chain B, Human Sulfotranferase Sult1c3 In Complex With Pap
Length = 306
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNY 48
+ +D K I++ KFL+ +S + ++ H SF+ MK+N TNY
Sbjct: 207 IKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNY 251
>pdb|2REO|A Chain A, Crystal Structure Of Human Sulfotransferase 1c3 (Sult1c3)
In Complex With Pap
Length = 305
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNY 48
+ +D K I++ KFL+ +S + ++ H SF+ MK+N TNY
Sbjct: 206 IKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNY 250
>pdb|3BFX|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
pdb|3BFX|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
Length = 296
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 19/93 (20%)
Query: 7 DLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKEKC 66
+++ ++Q GK +D + + ++ SFE MKEN TN V +++D+
Sbjct: 204 EIRKVMQFMGKKVDETV----LDKIVQETSFEKMKENPMTNRSTV-----SKSILDQSI- 253
Query: 67 ERGAFMRSGKIGGLPVYVRDSVGHISNLPGRRF 99
+FMR G +G D H + RF
Sbjct: 254 --SSFMRKGTVG-------DWKNHFTVAQNERF 277
>pdb|2AD1|A Chain A, Human Sulfotransferase Sult1c2
pdb|2GWH|A Chain A, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
pdb|2GWH|B Chain B, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
Length = 298
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 94 LPGRRFIKAHLPLRLLPKKLQDGSTK 119
+P R +K HLP LLP L + + K
Sbjct: 102 MPSPRILKTHLPFHLLPPSLLEKNCK 127
>pdb|1G3M|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
pdb|1G3M|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
Length = 294
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 49 ELVIEINKENNLIDKEKC-ERGAFMRSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLR 107
E+V I KE D EKC E F R + + + V + + R +K HLP
Sbjct: 55 EIVYMIYKEG---DVEKCKEDVIFNRIPFLECRKENLMNGVKQLDEMNSPRIVKTHLPPE 111
Query: 108 LLPKKLQDGSTK 119
LLP + K
Sbjct: 112 LLPASFWEKDCK 123
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 1 MLSVHQDLKSIIQRTGKFLDHPLSTPDILQLED----HLSFESMKENRATNY 48
+ ++DLK I++ L H L +L D H SF+ MK N +TNY
Sbjct: 188 LFLFYEDLKEDIRKEVIKLIHFLERKPSEELVDRIIHHTSFQEMKNNPSTNY 239
>pdb|4ATP|A Chain A, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|B Chain B, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|C Chain C, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|D Chain D, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|E Chain E, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|F Chain F, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|G Chain G, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|H Chain H, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|I Chain I, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|J Chain J, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|K Chain K, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATP|L Chain L, Structure Of Gaba-Transaminase A1r958 From Arthrobacter
Aurescens In Complex With Plp
pdb|4ATQ|A Chain A, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|B Chain B, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|C Chain C, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|D Chain D, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|E Chain E, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|F Chain F, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|G Chain G, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|H Chain H, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|I Chain I, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|J Chain J, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|K Chain K, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
pdb|4ATQ|L Chain L, Gaba-Transaminase A1r958 In Complex With External Aldimine
Plp-Gaba Adduct
Length = 456
Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 68 RGAFMRSGKIGGLPVYVRDSVGH-ISNLPGRRFI 100
R A + +G G+PVYV D+ G I ++ G FI
Sbjct: 34 RSAVVAAGVASGVPVYVEDADGGIIRDVDGNSFI 67
>pdb|1HY3|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
pdb|1HY3|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
Length = 294
Score = 26.6 bits (57), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 49 ELVIEINKENNLIDKEKC-ERGAFMRSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLR 107
E+V I KE D EKC E F R + + + V + + R +K HLP
Sbjct: 55 EIVYMIYKEG---DVEKCKEDVIFNRIPFLECRKENLMNGVKQLDEMNSPRIVKTHLPPE 111
Query: 108 LLPKKLQDGSTK 119
LLP + K
Sbjct: 112 LLPASFWEKDCK 123
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 1 MLSVHQDLKSIIQRTGKFLDHPLSTPDILQLED----HLSFESMKENRATNY 48
+ ++DLK I++ L H L +L D H SF+ MK N +TNY
Sbjct: 188 LFLFYEDLKEDIRKEVIKLIHFLERKPSEELVDRIIHHTSFQEMKNNPSTNY 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.138 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,630,604
Number of Sequences: 62578
Number of extensions: 135751
Number of successful extensions: 303
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 243
Number of HSP's gapped (non-prelim): 66
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)