RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10123
(123 letters)
>1fmj_A Retinol dehydratase; sulfotransferase, adenosine 3',5'-
diphosphate; HET: A3P RTL; 2.00A {Spodoptera frugiperda}
SCOP: c.37.1.5 PDB: 1fml_A* 1x8l_A* 1x8k_A* 1x8j_A*
Length = 351
Score = 63.1 bits (153), Expect = 5e-13
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
+DL I R FL LS I +L +HL+FE K N A N E EI
Sbjct: 252 LKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNNGAVNMEDYREIGILA------ 305
Query: 65 KCERGAFMRSGKIGG 79
+ F+R GK G
Sbjct: 306 --DGEHFIRKGKAGC 318
Score = 30.0 bits (67), Expect = 0.17
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 81 PVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDG 116
S+ +RF+K HLPL L+P + D
Sbjct: 142 SSRPGSSLLAAVPPTEKRFVKTHLPLSLMPPNMLDT 177
>1j99_A Alcohol sulfotransferase; dehydroepiandosterone, DHEA; HET: AND;
1.99A {Homo sapiens} SCOP: c.37.1.5 PDB: 1ov4_A* 3f3y_A*
2qp3_A* 2qp4_A* 1efh_A*
Length = 293
Score = 58.9 bits (143), Expect = 1e-11
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
QD I++ +FL L ++ + + SF+SMKEN+ +NY L+ +
Sbjct: 196 KQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDK----- 250
Query: 65 KCERGAFMRSGKIGG 79
+R G G
Sbjct: 251 ----TQLLRKGVSGD 261
Score = 34.6 bits (80), Expect = 0.004
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 85 RDSVGHISNLPGRRFIKAHLPLRLLPKKL 113
+S R +HLP++L PK
Sbjct: 89 EIGYTALSETESPRLFSSHLPIQLFPKSF 117
>2gwh_A Sulfotransferase 1C2; sulfate conjugation, pentachlorophenol, PA
pesticide, structural genomics, structural genomics
consort transferase; HET: A3P PCI; 1.80A {Homo sapiens}
PDB: 2ad1_A*
Length = 298
Score = 56.8 bits (137), Expect = 7e-11
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
++ K IQ+ +F+ L + ++ + SF+ MK+N NY + ++
Sbjct: 200 KKNPKHEIQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDH------ 253
Query: 65 KCERGAFMRSGKIGG 79
FMR G +G
Sbjct: 254 --SISPFMRKGAVGD 266
Score = 34.4 bits (79), Expect = 0.005
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 62 DKEKCERGAFM-RSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
D EK +R R + + + +P R +K HLP LLP L +
Sbjct: 69 DVEKSKRAPTHQRFPFLEMKIPSLGSGLEQAHAMPSPRILKTHLPFHLLPPSLLE 123
>3bfx_A Sulfotransferase 1C2; PAP, structural genomics, PSI, protein
structure initiative, structural genomics consortium,
SGC, alternative splicing; HET: A3P; 1.80A {Homo
sapiens} SCOP: c.37.1.5
Length = 296
Score = 56.7 bits (137), Expect = 8e-11
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
+D K I++ +F+ + + ++ SFE MKEN TN V + +
Sbjct: 198 KRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQ------ 251
Query: 65 KCERGAFMRSGKIGG 79
+FMR G +G
Sbjct: 252 --SISSFMRKGTVGD 264
Score = 36.2 bits (84), Expect = 0.001
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 62 DKEKCERGAFM-RSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
D EKC+R R I V +P R +K HL +LLP +
Sbjct: 67 DVEKCQRAIIQHRHPFIEWARPPQPSGVEKAKAMPSPRILKTHLSTQLLPPSFWE 121
>2reo_A Putative sulfotransferase 1C3; sulfate conjugation, PAP, structural
genom consortium, SGC; HET: A3P; 2.65A {Homo sapiens}
PDB: 2h8k_A*
Length = 305
Score = 55.5 bits (134), Expect = 2e-10
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
+D K I++ KFL+ +S + ++ H SF+ MK+N TNY + +++
Sbjct: 207 KKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHS----- 261
Query: 65 KCERGAFMRSGKIGG 79
FMR G G
Sbjct: 262 ---ISPFMRKGMPGD 273
Score = 34.4 bits (79), Expect = 0.005
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 91 ISNLPGRRFIKAHLPLRLLPKKLQD 115
+ + + IK HLP L+P +
Sbjct: 106 VLEMSSPQLIKTHLPSHLIPPSIWK 130
>1q44_A RARO47, steroid sulfotransferase, AT2G03760/; APO, structu
genomics, protein structure initiative, center for
eukaryot structural genomics; 1.90A {Arabidopsis
thaliana} SCOP: c.37.1.5 PDB: 2q3m_A
Length = 326
Score = 55.2 bits (133), Expect = 2e-10
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQ-LEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ + ++R +FL+ + ++ + SFES+ +
Sbjct: 232 KKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNLEVNKEGKL-----------P 280
Query: 64 EKCERGAFMRSGKIGG 79
E F R G+IGG
Sbjct: 281 NGIETKTFFRKGEIGG 296
Score = 37.9 bits (88), Expect = 3e-04
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 81 PVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
VY S+LP R + H+ LP+ ++ S K
Sbjct: 118 GVYYESPDFDFSSLPSPRLMNTHISHLSLPESVKSSSCK 156
>1aqu_A EST, estrogen sulfotransferase; PAP, sulfonation, 17-beta
estradiol, steroid-binding; HET: A3P EST; 1.60A {Mus
musculus} SCOP: c.37.1.5 PDB: 1aqy_A* 1bo6_A* 1hy3_A*
1g3m_A*
Length = 297
Score = 54.4 bits (131), Expect = 4e-10
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
+D++ + + +FL+ S + ++ H SF+ MK N +TNY ++ E
Sbjct: 199 KEDIRREVVKLIEFLERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQ------ 252
Query: 65 KCERGAFMRSGKIGG 79
+ FMR G IG
Sbjct: 253 --KVSPFMRKGIIGD 265
Score = 37.5 bits (87), Expect = 4e-04
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 86 DSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
+ + + R +K HLP +LLP + + K
Sbjct: 93 NGIKQLKEKESPRIVKTHLPPKLLPASFWEKNCK 126
>2zpt_X Tyrosine-ester sulfotransferase; SULT1D1, catecholamine,
sulfonation; HET: A3P GOL; 1.15A {Mus musculus} PDB:
2zvp_X* 2zvq_X* 2zyt_X* 2zyu_X* 2zyv_X* 2zyw_X*
Length = 295
Score = 54.0 bits (130), Expect = 6e-10
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
++ K IQ+ KFL+ + + ++ H SF MKEN + NY +++ ++
Sbjct: 197 KENPKCEIQKILKFLEKDIPEEILNKILYHSSFSVMKENPSANYTTMMKEEMDH------ 250
Query: 65 KCERGAFMRSGKIGG 79
FMR G G
Sbjct: 251 --SVSPFMRKGISGD 263
Score = 37.4 bits (87), Expect = 4e-04
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 84 VRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
+ + V ++N+P R +K HLP++LLP K
Sbjct: 89 ITNGVEMLNNMPSPRIVKTHLPVQLLPSSFWKNDCK 124
>3ckl_A Sulfotransferase family cytosolic 1B member 1; SULT1B1, human
cytosolic sulfotransferase, resveratrol, SGC, cytoplasm,
lipid metabolism; HET: STL A3P; 2.00A {Homo sapiens}
PDB: 2z5f_A*
Length = 298
Score = 54.1 bits (130), Expect = 6e-10
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
++ K I++ +FL+ L+ + ++ H SFE MK+N NY + ++
Sbjct: 200 KENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVMDH------ 253
Query: 65 KCERGAFMRSGKIGG 79
+ FMR G G
Sbjct: 254 --SKSPFMRKGTAGD 266
Score = 36.7 bits (85), Expect = 7e-04
Identities = 12/36 (33%), Positives = 16/36 (44%)
Query: 80 LPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
LP + + P R +K HLP LLPK +
Sbjct: 88 LPGLRTSGIEQLEKNPSPRIVKTHLPTDLLPKSFWE 123
>1ls6_A ARYL sulfotransferase; SULT 1A1, PAP, P-nitrophenol, positive
cooperativity, two substrate binding sites; HET: A3P
NPO; 1.90A {Homo sapiens} SCOP: c.37.1.5 PDB: 2d06_A*
3u3o_A* 3u3k_A* 3u3m_A* 3u3j_A* 3u3r_A* 1z28_A* 3qvv_A*
3qvu_A* 1z29_A* 1cjm_A 2a3r_A*
Length = 295
Score = 54.0 bits (130), Expect = 7e-10
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
++ K IQ+ +F+ H L + + H SF+ MK+N TNY V + +++
Sbjct: 197 KENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHS----- 251
Query: 65 KCERGAFMRSGKIGG 79
FMR G G
Sbjct: 252 ---ISPFMRKGMAGD 263
Score = 33.6 bits (77), Expect = 0.007
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 62 DKEKCERGAFM-RSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
D EKC R R + + + + + P R +K HLPL LLP+ L D
Sbjct: 66 DLEKCHRAPIFMRVPFLEFKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLD 120
>1q20_A SULT2B1B, sulfotransferase family, cytosolic, 2B, member 1 isoform
B; pregnenolone, cholesterol, PAP; HET: A3P PLO; 2.30A
{Homo sapiens} SCOP: c.37.1.5 PDB: 1q1z_A* 1q22_A*
Length = 299
Score = 52.9 bits (127), Expect = 1e-09
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
QDL+ ++R FL PL + + H +F +MK N +NY L+ ++
Sbjct: 201 QQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDH------ 254
Query: 65 KCERGAFMRSGKIGG 79
RGAF+R G G
Sbjct: 255 --RRGAFLRKGVCGD 267
Score = 35.5 bits (82), Expect = 0.002
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 91 ISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
+ + R + +HLP+++ K K
Sbjct: 100 LPDQYSPRLMSSHLPIQIFTKAFFSSKAK 128
>1q1q_A SULT2B1A, sulfotransferase family, cytosolic, 2B, member 1 isoform
A; pregnenolone, PAP; HET: A3P NHE; 2.91A {Homo sapiens}
SCOP: c.37.1.5
Length = 350
Score = 52.6 bits (126), Expect = 3e-09
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
QDL+ ++R FL PL + + H +F +MK N +NY L+ ++
Sbjct: 199 QQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDH------ 252
Query: 65 KCERGAFMRSGKIGG 79
RGAF+R G G
Sbjct: 253 --RRGAFLRKGVCGD 265
Score = 35.6 bits (82), Expect = 0.002
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 91 ISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
+ + R + +HLP+++ K K
Sbjct: 98 LPDQYSPRLMSSHLPIQIFTKAFFSSKAK 126
>3mgb_A TEG12; sulfotransferase, glycopeptide, antibiotic, transferase-anti
complex; HET: GHP 3MY 3FG OMY PAP; 2.04A {Uncultured
soil bacterium} PDB: 3mgc_A* 3mg9_A* 3nib_A*
Length = 319
Score = 52.1 bits (125), Expect = 4e-09
Identities = 13/77 (16%), Positives = 21/77 (27%), Gaps = 11/77 (14%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPD--ILQLEDHLSFESMKENRATNYELVIEINKENNLID 62
D + +FLD I + + E M+E + + +
Sbjct: 205 KGDPVARFSEIVEFLDLGGPVDIEDIRRAVAASTLERMRELEKRSEQQGGGSPIRHG--- 261
Query: 63 KEKCERGAFMRSGKIGG 79
A M G GG
Sbjct: 262 ------DARMMKGGPGG 272
Score = 33.2 bits (76), Expect = 0.013
Identities = 7/39 (17%), Positives = 12/39 (30%)
Query: 80 LPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGST 118
L +R + +K HL + L +T
Sbjct: 78 LEAMLRFGDLPPAEPMEPVLVKTHLKADVPVLGLYGEAT 116
>2ov8_A STAL; sulfotransferase, structural genomics, montr kingston
bacterial structural genomics initiative, BSGI, UN
function; 2.58A {Streptomyces toyocaensis} PDB: 2ovb_A
2ovf_A*
Length = 288
Score = 50.0 bits (120), Expect = 1e-08
Identities = 10/74 (13%), Positives = 24/74 (32%), Gaps = 5/74 (6%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
+D + + + FL+ + + + E M+E + L E +
Sbjct: 185 RKDPEGELWKVVDFLELGGR-DGVADAVANCTLERMREMEERSKLL----GLETTGLMTR 239
Query: 65 KCERGAFMRSGKIG 78
++ F+ G
Sbjct: 240 GGKQLPFVGKGGQR 253
Score = 29.6 bits (67), Expect = 0.19
Identities = 6/39 (15%), Positives = 12/39 (30%)
Query: 80 LPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGST 118
L +RD ++ + + H + ST
Sbjct: 62 LEGLLRDGEAPSADPDEQVLLATHFTADRPVLRFYREST 100
>1zd1_A Sulfotransferase 4A1; SGC, SULT4A1, structural genomics, structural
genomics conso transferase; 2.24A {Homo sapiens}
Length = 284
Score = 40.1 bits (94), Expect = 5e-05
Identities = 11/75 (14%), Positives = 25/75 (33%), Gaps = 22/75 (29%)
Query: 5 HQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDKE 64
H+DL +++++ +FL + L +H + N E +
Sbjct: 200 HRDLVTMVEQLARFLGVSCDKAQLEALTEHCHQLVDQC---CNAEAL------------- 243
Query: 65 KCERGAFMRSGKIGG 79
+ G++G
Sbjct: 244 ------PVGRGRVGL 252
Score = 37.0 bits (86), Expect = 5e-04
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 83 YVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQDGSTK 119
Y + + I L R IK+HLP R LP L +G +K
Sbjct: 91 YPQPGLDIIKELTSPRLIKSHLPYRFLPSDLHNGDSK 127
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 26.2 bits (57), Expect = 3.5
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 7 DLKSIIQRTGKFLDHPLSTP--DILQLEDHLSFESMKE 42
DL+++ L+ + DI++L+ LS E ++
Sbjct: 1858 DLRAL-DTVTNVLNF-IKLQKIDIIELQKSLSLEEVEG 1893
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural
genomics, escherichia coli putative nudix hydrolase,
PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP:
d.113.1.2
Length = 180
Score = 24.6 bits (54), Expect = 8.8
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 40 MKENRATNYELVIEINKENNLIDKEKCERGAFMRSGKI-GGLPVYVRDSVGHISNLPGRR 98
M++ R + E V +N+EN +I + R + V D +G I L RR
Sbjct: 1 MEQRRLASTEWVDIVNEENEVIA--QASREQMRAQCLRHRATYIVVHDGMGKI--LVQRR 56
Query: 99 -FIKAHLPLR 107
K LP
Sbjct: 57 TETKDFLPGM 66
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.138 0.393
Gapped
Lambda K H
0.267 0.0653 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,827,169
Number of extensions: 99163
Number of successful extensions: 257
Number of sequences better than 10.0: 1
Number of HSP's gapped: 246
Number of HSP's successfully gapped: 44
Length of query: 123
Length of database: 6,701,793
Length adjustment: 82
Effective length of query: 41
Effective length of database: 4,412,271
Effective search space: 180903111
Effective search space used: 180903111
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.6 bits)