RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10123
(123 letters)
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 43.6 bits (102), Expect = 1e-06
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ ++ K IQ+ +F+ H L + + H SF+ MK+N TNY V + +++
Sbjct: 189 MKENPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHS---- 244
Query: 64 EKCERGAFMRSGKIGG 79
FMR G G
Sbjct: 245 ----ISPFMRKGMAGD 256
Score = 24.8 bits (53), Expect = 4.1
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 62 DKEKCERGA-FMRSGKIGGLPVYVRDSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
D EKC R FMR + + + + + P R +K HLPL LLP+ L D
Sbjct: 59 DLEKCHRAPIFMRVPFLEFKAPGIPSGMETLKDTPAPRLLKTHLPLALLPQTLLD 113
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 41.8 bits (97), Expect = 5e-06
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ QD I++ +FL L ++ + + SF+SMKEN+ +NY L
Sbjct: 186 LKQDTGRTIEKICQFLGKTLEPEELNLILKNSSFQSMKENKMSNYS---------LLSVD 236
Query: 64 EKCERGAFMRSGKIGG 79
++ +R G G
Sbjct: 237 YVVDKTQLLRKGVSGD 252
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 285
Score = 40.9 bits (95), Expect = 1e-05
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ +D K I++ +F+ + + ++ SFE MKEN TN V + + +
Sbjct: 186 IKRDPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQS---- 241
Query: 64 EKCERGAFMRSGKIGG 79
+FMR G +G
Sbjct: 242 ----ISSFMRKGTVGD 253
Score = 24.3 bits (52), Expect = 5.0
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 86 DSVGHISNLPGRRFIKAHLPLRLLPKKLQD 115
V +P R +K HL +LLP +
Sbjct: 81 SGVEKAKAMPSPRILKTHLSTQLLPPSFWE 110
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 39.8 bits (92), Expect = 2e-05
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ ++ K I++ +FL+ L+ + ++ H SFE MK+N NY + +++
Sbjct: 194 MKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVMDHS---- 249
Query: 64 EKCERGAFMRSGKIG 78
+ FMR G G
Sbjct: 250 ----KSPFMRKGTAG 260
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human
(Homo sapiens) [TaxId: 9606]}
Length = 294
Score = 39.5 bits (91), Expect = 3e-05
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ QDL+ ++R FL PL + + H +F +MK N +NY L+ ++
Sbjct: 196 LQQDLQGSVERICGFLGRPLGKEALGSVVAHSTFSAMKANTMSNYTLLPPSLLDHR---- 251
Query: 64 EKCERGAFMRSGKIGG 79
RGAF+R G G
Sbjct: 252 ----RGAFLRKGVCGD 263
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 290
Score = 38.3 bits (88), Expect = 7e-05
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNLIDK 63
+ +D++ + + FL+ S + ++ H SF+ MK N +TNY + +
Sbjct: 193 LKEDIRKEVIKLIHFLERKPSEELVDRIIHHTSFQEMKNNPSTNYTTLPDEIMNQK---- 248
Query: 64 EKCERGAFMRSGKIG 78
FMR G G
Sbjct: 249 ----LSPFMRKGITG 259
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm
(Spodoptera frugiperda) [TaxId: 7108]}
Length = 342
Score = 37.7 bits (86), Expect = 1e-04
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 1 MLSVHQDLKSIIQRTGKFLDHPLSTPDILQLEDHLSFESMKENRATNYELVIEINKENNL 60
+DL I R FL LS I +L +HL+FE K N A N E EI +
Sbjct: 241 YEDYLKDLPGCIARIADFLGKKLSEEQIQRLCEHLNFEKFKNNGAVNMEDYREIGILAD- 299
Query: 61 IDKEKCERGAFMRSGKIGG 79
F+R GK G
Sbjct: 300 -------GEHFIRKGKAGC 311
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 320
Score = 37.1 bits (85), Expect = 2e-04
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 4 VHQDLKSIIQRTGKFLDHPLSTPDILQ-LEDHLSFESMKENRATNYELVIEINKENNLID 62
+ + + ++R +FL+ + ++ + SFES+ E+NKE L +
Sbjct: 226 LKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNL---------EVNKEGKLPN 276
Query: 63 KEKCERGAFMRSGKIGG 79
+ F R G+IGG
Sbjct: 277 GIE--TKTFFRKGEIGG 291
>d1gkub3 e.10.1.1 (B:499-1054) Topoisomerase "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 556
Score = 24.6 bits (52), Expect = 5.3
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 62 DKEKCERGAFMRSGKIGGLPVYVRDSVGHISNLP 95
K GA + + + V S+GH+ +L
Sbjct: 29 PSVKVLDGAVVYEIPMQKYVLMVTASIGHVVDLI 62
>d1nkqa_ d.177.1.1 (A:) Hypothetical protein Ynl168c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 257
Score = 23.7 bits (50), Expect = 7.8
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 49 ELVIEINKENNLIDKEKCERGAFMRSGKIGGLPVYVRDSVGH 90
EL + ++K + + K K E SG L + R+
Sbjct: 88 ELALIVSKHLSNVTKMKPEEVYDSISGVALALDLTARNVQDE 129
>d2cyya2 d.58.4.2 (A:65-150) Putative transcriptional regulator
PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 86
Score = 22.8 bits (49), Expect = 9.5
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 17 KFLDHPLSTPDILQLEDHLSFESMKENRA 45
FLD S P + + ++ KE
Sbjct: 55 NFLDLIGSIPGVEGTHTMIVLKTHKETTE 83
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.138 0.393
Gapped
Lambda K H
0.267 0.0503 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 442,999
Number of extensions: 18823
Number of successful extensions: 56
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 17
Length of query: 123
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 48
Effective length of database: 1,377,846
Effective search space: 66136608
Effective search space used: 66136608
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.4 bits)