BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10125
(312 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270012981|gb|EFA09429.1| hypothetical protein TcasGA2_TC010640 [Tribolium castaneum]
Length = 202
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 95/129 (73%), Gaps = 11/129 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + S++K+++EDAF YYGP++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 1 MSRYGSDCKVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDA 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG-SVRARGRPFNPDDKCYECG 150
+RG DGR I GRR RVEM SNG+SG R YRG R+RGRPF+PDD+CYECG
Sbjct: 61 IRGLDGRTICGRRARVEM---------SNGKSGSGR-YRGPPPRSRGRPFHPDDRCYECG 110
Query: 151 GRGHYARDC 159
RGHYARDC
Sbjct: 111 DRGHYARDC 119
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 49/80 (61%), Gaps = 15/80 (18%)
Query: 156 ARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSV-RARGRP 214
ARD G GR I GRR RVEMSN G+SG R YRG R+RGRP
Sbjct: 54 ARDAEDAIRGLDGR----TICGRRARVEMSN---------GKSGSGR-YRGPPPRSRGRP 99
Query: 215 FNPDDKCYECGGRGHYARDC 234
F+PDD+CYECG RGHYARDC
Sbjct: 100 FHPDDRCYECGDRGHYARDC 119
>gi|189241002|ref|XP_968789.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 200
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 95/129 (73%), Gaps = 11/129 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + S++K+++EDAF YYGP++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 1 MSRYGSDCKVYVGDLGNSASKQELEDAFRYYGPLRNVWVARNPPGFAFVEFEDARDAEDA 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG-SVRARGRPFNPDDKCYECG 150
+RG DGR I GRR RVEM SNG+SG R YRG R+RGRPF+PDD+CYECG
Sbjct: 61 IRGLDGRTICGRRARVEM---------SNGKSGSGR-YRGPPPRSRGRPFHPDDRCYECG 110
Query: 151 GRGHYARDC 159
RGHYARDC
Sbjct: 111 DRGHYARDC 119
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 49/80 (61%), Gaps = 15/80 (18%)
Query: 156 ARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSV-RARGRP 214
ARD G GR I GRR RVEMSN G+SG R YRG R+RGRP
Sbjct: 54 ARDAEDAIRGLDGR----TICGRRARVEMSN---------GKSGSGR-YRGPPPRSRGRP 99
Query: 215 FNPDDKCYECGGRGHYARDC 234
F+PDD+CYECG RGHYARDC
Sbjct: 100 FHPDDRCYECGDRGHYARDC 119
>gi|307180295|gb|EFN68328.1| Splicing factor, arginine/serine-rich 7 [Camponotus floridanus]
Length = 156
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/128 (59%), Positives = 94/128 (73%), Gaps = 11/128 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + +S++K+++EDAFSYYG ++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 4 MSRYPSDGKVYVGDLGSSASKQELEDAFSYYGSLQNVWVARNPPGFAFVEFEDPRDAEDA 63
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
VRG DGR + GRRVRVE+SN +K+R R + R R GRPF+P+DKCYECG
Sbjct: 64 VRGLDGRTLCGRRVRVELSNGKKLRDRGSFR-----------RGSGRPFHPEDKCYECGE 112
Query: 152 RGHYARDC 159
RGHYARDC
Sbjct: 113 RGHYARDC 120
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 47/78 (60%), Gaps = 15/78 (19%)
Query: 157 RDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFN 216
RD G GR LC GRRVRVE+SN +K+R R + R R GRPF+
Sbjct: 58 RDAEDAVRGLDGR-TLC---GRRVRVELSNGKKLRDRGSFR-----------RGSGRPFH 102
Query: 217 PDDKCYECGGRGHYARDC 234
P+DKCYECG RGHYARDC
Sbjct: 103 PEDKCYECGERGHYARDC 120
>gi|322787527|gb|EFZ13615.1| hypothetical protein SINV_15244 [Solenopsis invicta]
Length = 128
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 88/112 (78%), Gaps = 11/112 (9%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K+ +EDAFSYYGP+ NVWVARNPPGF FVEFED RDAEDAVRG DGR + GRR+RV
Sbjct: 19 SSASKQQLEDAFSYYGPLHNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRIVCGRRIRV 78
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+SN +K+R DRG+ R GRPF+P+DKCYECG RGHYARDC
Sbjct: 79 ELSNGKKLR---------DRGF--PRRGVGRPFHPEDKCYECGERGHYARDC 119
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 42/60 (70%), Gaps = 11/60 (18%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ GRR+RVE+SN +K+R DRG+ R GRPF+P+DKCYECG RGHYARDC
Sbjct: 71 VCGRRIRVELSNGKKLR---------DRGF--PRRGVGRPFHPEDKCYECGERGHYARDC 119
>gi|242012315|ref|XP_002426878.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212511107|gb|EEB14140.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 192
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 91/122 (74%), Gaps = 12/122 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + +S++K+D+EDAF YYGP+KNVWVAR+PPGF FVEFED RDA+DAVRG DGR
Sbjct: 13 VYVGDL--GSSASKQDLEDAFGYYGPLKNVWVARHPPGFAFVEFEDPRDADDAVRGLDGR 70
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
I GRRVRVE SN R G DRG V RGRPF+PDD+CY+CG RGHYARD
Sbjct: 71 SIAGRRVRVEPSNGMAR------RRGRDRG----VSRRGRPFHPDDRCYQCGERGHYARD 120
Query: 159 CR 160
C+
Sbjct: 121 CK 122
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 40/61 (65%), Gaps = 10/61 (16%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRRVRVE SN R G DRG V RGRPF+PDD+CY+CG RGHYARDC
Sbjct: 72 IAGRRVRVEPSNGMARR------RGRDRG----VSRRGRPFHPDDRCYQCGERGHYARDC 121
Query: 235 R 235
+
Sbjct: 122 K 122
>gi|193636560|ref|XP_001952396.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Acyrthosiphon pisum]
gi|328724544|ref|XP_003248180.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Acyrthosiphon pisum]
Length = 181
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 93/127 (73%), Gaps = 12/127 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + +S++K+D+EDAFSYYG I+NVWVARNPPGF FVEFED RDAEDAVRG DGR
Sbjct: 17 IYVGDL--GSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
I GRRVRVE+SN +G YRG RGRPF+P+DKCYECG RGHYARD
Sbjct: 75 SICGRRVRVELSNAGSRKG----------AYRGGPPRRGRPFHPEDKCYECGDRGHYARD 124
Query: 159 CRSRRSG 165
CR + G
Sbjct: 125 CRRFKGG 131
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 42/66 (63%), Gaps = 10/66 (15%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRRVRVE+SN +G YRG RGRPF+P+DKCYECG RGHYARDC
Sbjct: 76 ICGRRVRVELSNAGSRKG----------AYRGGPPRRGRPFHPEDKCYECGDRGHYARDC 125
Query: 235 RSRRSG 240
R + G
Sbjct: 126 RRFKGG 131
>gi|328724546|ref|XP_003248181.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Acyrthosiphon pisum]
gi|328724548|ref|XP_003248182.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 4
[Acyrthosiphon pisum]
Length = 137
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 93/127 (73%), Gaps = 12/127 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + +S++K+D+EDAFSYYG I+NVWVARNPPGF FVEFED RDAEDAVRG DGR
Sbjct: 17 IYVGDL--GSSASKQDLEDAFSYYGSIRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
I GRRVRVE+SN +G YRG RGRPF+P+DKCYECG RGHYARD
Sbjct: 75 SICGRRVRVELSNAGSRKG----------AYRGGPPRRGRPFHPEDKCYECGDRGHYARD 124
Query: 159 CRSRRSG 165
CR + G
Sbjct: 125 CRRFKGG 131
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 46/72 (63%), Gaps = 13/72 (18%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRRVRVE+SN +G YRG RGRPF+P+DKCYECG RGHYARDC
Sbjct: 76 ICGRRVRVELSNAGSRKG----------AYRGGPPRRGRPFHPEDKCYECGDRGHYARDC 125
Query: 235 RSRRSGGGGRRR 246
R + GGRRR
Sbjct: 126 RRFK---GGRRR 134
>gi|110767678|ref|XP_001122800.1| PREDICTED: serine/arginine-rich splicing factor 7 [Apis mellifera]
gi|380013414|ref|XP_003690755.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 206
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 93/133 (69%), Gaps = 11/133 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + + +TK+++EDAFSYYG ++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 4 MSRYPSDCKVYVGDLGSGATKQELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDA 63
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
+RG DGR I GRR RVE SN +++R RS R G GR F+P+D+CYECG
Sbjct: 64 IRGLDGRTICGRRARVEPSNGRRLRDRSYFRRGI-----------GRLFHPEDRCYECGE 112
Query: 152 RGHYARDCRSRRS 164
RGHYAR+C+ R+
Sbjct: 113 RGHYARNCQRHRN 125
>gi|383850973|ref|XP_003701038.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Megachile
rotundata]
Length = 206
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 94/133 (70%), Gaps = 11/133 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
+ RY V + +S+TKE++EDAFSYYG ++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 4 MPRYPSDCKVYVGDLGSSATKEELEDAFSYYGSLRNVWVARNPPGFAFVEFEDARDAEDA 63
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
+RG DGR I GRR RVE SN +++R DRGY R GR F+P+D+CYECG
Sbjct: 64 IRGLDGRIICGRRARVEPSNGRRLR---------DRGY--FRRGIGRLFHPEDRCYECGE 112
Query: 152 RGHYARDCRSRRS 164
+GHYAR+C+ R+
Sbjct: 113 KGHYARNCQRLRN 125
>gi|307206112|gb|EFN84192.1| Splicing factor, arginine/serine-rich 7 [Harpegnathos saltator]
Length = 127
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 95/128 (74%), Gaps = 11/128 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + ++++K+++EDAFSYYG ++NVWVAR+PPGF FVEFED RDAEDA
Sbjct: 1 MSRYHSDGKVYVGDLGSNASKQELEDAFSYYGSLRNVWVARHPPGFAFVEFEDPRDAEDA 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
VRG DGR I GRR RVE+SN +++R R + R RG+VR+ ++P+D+CYECG
Sbjct: 61 VRGLDGRTICGRRARVELSNGKRLRDRGSMR-------RGAVRS----YHPEDRCYECGE 109
Query: 152 RGHYARDC 159
RGHYARDC
Sbjct: 110 RGHYARDC 117
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 11/60 (18%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRR RVE+SN +++R R + R RG+VR+ ++P+D+CYECG RGHYARDC
Sbjct: 69 ICGRRARVELSNGKRLRDRGSMR-------RGAVRS----YHPEDRCYECGERGHYARDC 117
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 91/131 (69%), Gaps = 3/131 (2%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + +++K++IEDAFSYYGP++NVWVARNPPGF FVEF+D RDAED+
Sbjct: 5 MSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFDDARDAEDS 64
Query: 92 VRGFDGREINGRRVRVEMSN---PQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYE 148
VRG DGR + GRRVRVE+S + RG G GG G + FNPDD+CYE
Sbjct: 65 VRGLDGRTVCGRRVRVELSTGKGGRGFRGGGGGGGGGGGGGPPRGKGGRGAFNPDDRCYE 124
Query: 149 CGGRGHYARDC 159
CGGRGHYARDC
Sbjct: 125 CGGRGHYARDC 135
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + +++K++IEDAFSYYGP++NVWVARNPPGF FVEFED RDAED+
Sbjct: 1 MSRYPHDAKVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFEDARDAEDS 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGS-VRARGRPFNPDDKCYECG 150
VRG DGR I GRR RVE+S + RG G GG RG ++ F+PDD+CYECG
Sbjct: 61 VRGLDGRTICGRRARVELSTGKGGRGLRGGDRGGGDRGRGGPPSSKSGRFHPDDRCYECG 120
Query: 151 GRGHYARDC 159
GRGHYARDC
Sbjct: 121 GRGHYARDC 129
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/20 (90%), Positives = 20/20 (100%)
Query: 215 FNPDDKCYECGGRGHYARDC 234
F+PDD+CYECGGRGHYARDC
Sbjct: 110 FHPDDRCYECGGRGHYARDC 129
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 88/128 (68%), Gaps = 5/128 (3%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + +++K+DIE+AF YYGP++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 1 MSRYPHDAKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDA 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
VRG DGR I+GRR RVE+S + RG GR G +G F DD+CYECGG
Sbjct: 61 VRGLDGRTISGRRARVELSTGRGGRGGGGGRGG-----PPRGGGKGGRFQSDDRCYECGG 115
Query: 152 RGHYARDC 159
RGH+ARDC
Sbjct: 116 RGHFARDC 123
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 156 ARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF 215
ARD G GR I+GRR RVE+S + RG GR G +G F
Sbjct: 54 ARDAEDAVRGLDGR----TISGRRARVELSTGRGGRGGGGGRGG-----PPRGGGKGGRF 104
Query: 216 NPDDKCYECGGRGHYARDC 234
DD+CYECGGRGH+ARDC
Sbjct: 105 QSDDRCYECGGRGHFARDC 123
>gi|346468811|gb|AEO34250.1| hypothetical protein [Amblyomma maculatum]
Length = 161
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 15/113 (13%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S TK ++E+AF YYGP++NVWVAR+PPGF FVEFED RDA DAVR DG+ + GRRVRV
Sbjct: 30 NSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDARDARDAVRALDGKMLCGRRVRV 89
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
E+S G+S R S R RPF P D+CY+CG RGHYARDCR
Sbjct: 90 ELST-----GKS----------RNSYRGSSRPFQPTDRCYDCGERGHYARDCR 127
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 35/59 (59%), Gaps = 15/59 (25%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 235
GRRVRVE+S G+S R S R RPF P D+CY+CG RGHYARDCR
Sbjct: 84 GRRVRVELST---------GKS------RNSYRGSSRPFQPTDRCYDCGERGHYARDCR 127
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 88/128 (68%), Gaps = 3/128 (2%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++RY V + +++K+DIE+AF YYGP++NVWVARNPPGF FVEFED RDAEDA
Sbjct: 1 MSRYPHDAKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDA 60
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
VRG DGR I+GRR RVE+S + RG G GG G R F DD+CYECGG
Sbjct: 61 VRGLDGRTISGRRARVELSTGRGGRGGGGGGRGGPPRGGGKPGGR---FQSDDRCYECGG 117
Query: 152 RGHYARDC 159
RGH+ARDC
Sbjct: 118 RGHFARDC 125
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 156 ARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF 215
ARD G GR I+GRR RVE+S + RG G GG G R F
Sbjct: 54 ARDAEDAVRGLDGR----TISGRRARVELSTGRGGRGGGGGGRGGPPRGGGKPGGR---F 106
Query: 216 NPDDKCYECGGRGHYARDC 234
DD+CYECGGRGH+ARDC
Sbjct: 107 QSDDRCYECGGRGHFARDC 125
>gi|242010923|ref|XP_002426207.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212510258|gb|EEB13469.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 173
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 10/112 (8%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K+++EDAF YYGP++NVWVARNPPGF FVEFED RDA+DAVRG DGR + GRRVRV
Sbjct: 20 SSASKQELEDAFGYYGPLRNVWVARNPPGFAFVEFEDPRDADDAVRGLDGRTVCGRRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E SN R R G RGRPFNPDD+CYECG RGHYARDC
Sbjct: 80 EPSNGMGGRRRDRGPP----------PRRGRPFNPDDRCYECGERGHYARDC 121
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ GRRVRVE SN R R G RGRPFNPDD+CYECG RGHYARDC
Sbjct: 72 VCGRRVRVEPSNGMGGRRRDRGPP----------PRRGRPFNPDDRCYECGERGHYARDC 121
>gi|325303436|tpg|DAA34137.1| TPA_exp: alternative splicing factor SRp20/9G8 [Amblyomma
variegatum]
Length = 192
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 78/113 (69%), Gaps = 15/113 (13%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S TK ++E+AF YYGP++NVWVAR+PPGF FVEFED RDA DAVR DG+ + GRRVRV
Sbjct: 21 NSGTKHELEEAFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKMLCGRRVRV 80
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
E+S G+S R S R RPF P D+CY+CG RGHYARDCR
Sbjct: 81 ELST-----GKS----------RNSYRGSSRPFQPTDRCYDCGERGHYARDCR 118
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 15/61 (24%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ GRRVRVE+S G+S R S R RPF P D+CY+CG RGHYARDC
Sbjct: 73 LCGRRVRVELST---------GKS------RNSYRGSSRPFQPTDRCYDCGERGHYARDC 117
Query: 235 R 235
R
Sbjct: 118 R 118
>gi|242002226|ref|XP_002435756.1| RSZp22 protein, putative [Ixodes scapularis]
gi|215499092|gb|EEC08586.1| RSZp22 protein, putative [Ixodes scapularis]
Length = 199
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 78/113 (69%), Gaps = 15/113 (13%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S TK ++E++F YYGP++NVWVAR+PPGF FVEFED RDA DAVR DG+ + GRRVRV
Sbjct: 21 NSGTKHELEESFGYYGPLRNVWVARSPPGFAFVEFEDPRDARDAVRALDGKMLCGRRVRV 80
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
E+S G+S R S R RPF P D+CY+CG RGHYARDCR
Sbjct: 81 ELST-----GKS----------RNSYRGSSRPFQPTDRCYDCGERGHYARDCR 118
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 15/61 (24%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ GRRVRVE+S G+S R S R RPF P D+CY+CG RGHYARDC
Sbjct: 73 LCGRRVRVELST---------GKS------RNSYRGSSRPFQPTDRCYDCGERGHYARDC 117
Query: 235 R 235
R
Sbjct: 118 R 118
>gi|389608975|dbj|BAM18099.1| hypothetical protein [Papilio xuthus]
Length = 145
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 80/114 (70%), Gaps = 15/114 (13%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+++K ++EDAFSYYGP++NVWVARNPPGF FVEFED RDAEDA+RG DGR I GRR RV
Sbjct: 16 NNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRTICGRRARV 75
Query: 108 EMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDKCYECGGRGHYARDC 159
EMSN G RGY R+R P DD+CY+CG RGHYARDC
Sbjct: 76 EMSN-------------GSRGYGRGPPPRSRLPPRPYDDRCYDCGDRGHYARDC 116
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 34/63 (53%), Gaps = 15/63 (23%)
Query: 174 KINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDKCYECGGRGHYA 231
I GRR RVEMSN G RGY R+R P DD+CY+CG RGHYA
Sbjct: 67 TICGRRARVEMSN-------------GSRGYGRGPPPRSRLPPRPYDDRCYDCGDRGHYA 113
Query: 232 RDC 234
RDC
Sbjct: 114 RDC 116
>gi|355718930|gb|AES06434.1| splicing factor, arginine/serine-rich 7, 35kDa [Mustela putorius
furo]
Length = 199
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 85/134 (63%), Gaps = 14/134 (10%)
Query: 28 PVMM--IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDR 85
PV+M RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED
Sbjct: 7 PVIMSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 66
Query: 86 RDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDK 145
RDAEDAVRG DG+ I G RVRVE+S R R + R R RPF+P+D+
Sbjct: 67 RDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDR 114
Query: 146 CYECGGRGHYARDC 159
CYECG +GHYA DC
Sbjct: 115 CYECGEKGHYAYDC 128
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 81 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 128
>gi|55926178|ref|NP_001007487.1| serine/arginine-rich splicing factor 7 [Xenopus (Silurana)
tropicalis]
gi|51262158|gb|AAH79925.1| splicing factor, arginine/serine-rich 7, 35kDa [Xenopus (Silurana)
tropicalis]
Length = 234
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 81/127 (63%), Gaps = 12/127 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPSDRCYECGEKG 113
Query: 154 HYARDCR 160
HYA DC+
Sbjct: 114 HYAYDCQ 120
>gi|148706566|gb|EDL38513.1| mCG17902, isoform CRA_l [Mus musculus]
Length = 243
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 86/139 (61%), Gaps = 14/139 (10%)
Query: 23 AEIEDPVMM--IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFV 80
+ + P +M RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FV
Sbjct: 1 SRVHGPAIMSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFV 60
Query: 81 EFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF 140
EFED RDAEDAVRG DG+ I G RVRVE+S R R + R R RPF
Sbjct: 61 EFEDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPF 108
Query: 141 NPDDKCYECGGRGHYARDC 159
+P+D+CYECG +GHYA DC
Sbjct: 109 DPNDRCYECGEKGHYAYDC 127
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 127
>gi|148706565|gb|EDL38512.1| mCG17902, isoform CRA_k [Mus musculus]
Length = 165
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 85/137 (62%), Gaps = 14/137 (10%)
Query: 25 IEDPVMM--IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEF 82
+ P +M RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEF
Sbjct: 3 VHGPAIMSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEF 62
Query: 83 EDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNP 142
ED RDAEDAVRG DG+ I G RVRVE+S R R + R R RPF+P
Sbjct: 63 EDPRDAEDAVRGLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDP 110
Query: 143 DDKCYECGGRGHYARDC 159
+D+CYECG +GHYA DC
Sbjct: 111 NDRCYECGEKGHYAYDC 127
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 127
>gi|147900017|ref|NP_001086749.1| serine/arginine-rich splicing factor 7 [Xenopus laevis]
gi|50603927|gb|AAH77393.1| MGC81677 protein [Xenopus laevis]
Length = 234
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 81/127 (63%), Gaps = 12/127 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPSDRCYECGEKG 113
Query: 154 HYARDCR 160
HYA DC+
Sbjct: 114 HYAYDCQ 120
>gi|148223523|ref|NP_001086618.1| MGC78845 protein [Xenopus laevis]
gi|50603914|gb|AAH77185.1| MGC78845 protein [Xenopus laevis]
Length = 224
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 81/127 (63%), Gaps = 12/127 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYAGEAKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPSDRCYECGEKG 113
Query: 154 HYARDCR 160
HYA DC+
Sbjct: 114 HYAYDCQ 120
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 12/61 (19%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPSDRCYECGEKGHYAYDC 119
Query: 235 R 235
+
Sbjct: 120 Q 120
>gi|20071765|gb|AAH27391.1| Sfrs7 protein [Mus musculus]
gi|148706560|gb|EDL38507.1| mCG17902, isoform CRA_f [Mus musculus]
Length = 157
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|26328639|dbj|BAC28058.1| unnamed protein product [Mus musculus]
Length = 157
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|68534386|gb|AAH99175.1| Splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|149050598|gb|EDM02771.1| rCG61762, isoform CRA_a [Rattus norvegicus]
gi|149050599|gb|EDM02772.1| rCG61762, isoform CRA_a [Rattus norvegicus]
Length = 157
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|326915074|ref|XP_003203846.1| PREDICTED: hypothetical protein LOC100542161 [Meleagris gallopavo]
Length = 273
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 85/133 (63%), Gaps = 16/133 (12%)
Query: 27 DPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRR 86
DP + A +YV + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED R
Sbjct: 36 DPALPCAE--TKVYVGNL--GTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPR 91
Query: 87 DAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKC 146
DAEDAVRG DG+ I G RVRVE+S R R + R R RPF+P+D+C
Sbjct: 92 DAEDAVRGLDGKVICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRC 139
Query: 147 YECGGRGHYARDC 159
YECG +GHYA DC
Sbjct: 140 YECGEKGHYAYDC 152
>gi|417397587|gb|JAA45827.1| Putative serine/arginine-rich splicing factor 7 [Desmodus rotundus]
Length = 235
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|327262673|ref|XP_003216148.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Anolis carolinensis]
Length = 225
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|149050604|gb|EDM02777.1| rCG61762, isoform CRA_f [Rattus norvegicus]
Length = 207
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706563|gb|EDL38510.1| mCG17902, isoform CRA_i [Mus musculus]
Length = 205
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|149422794|ref|XP_001506905.1| PREDICTED: serine/arginine-rich splicing factor 7-like, partial
[Ornithorhynchus anatinus]
Length = 228
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 10 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 69
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 70 ELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 109
>gi|148706557|gb|EDL38504.1| mCG17902, isoform CRA_c [Mus musculus]
Length = 266
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 48 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 107
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 108 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 147
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 100 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 147
>gi|449274550|gb|EMC83651.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 226
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 11 TGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 70
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 71 EVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
>gi|148706561|gb|EDL38508.1| mCG17902, isoform CRA_g [Mus musculus]
Length = 165
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 48 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 107
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 108 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 147
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 100 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 147
>gi|148298845|ref|NP_001091768.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|95103084|gb|ABF51483.1| arginine/serine-rich splicing factor 7 [Bombyx mori]
gi|102269217|gb|ABF55972.2| xl6 [Bombyx mori]
Length = 176
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 85/121 (70%), Gaps = 12/121 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + +++K ++EDAFSYYGP++NVWVARNPPGF FVEFED RDAEDAVRG DGR
Sbjct: 9 VYVGDL--GNNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGR 66
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
I GRR RVEMSN GR G RG R RP+ DD+CY+CG RGHYARD
Sbjct: 67 TICGRRARVEMSN--------GGRGYGSRGPPPRSRLPPRPY--DDRCYDCGDRGHYARD 116
Query: 159 C 159
C
Sbjct: 117 C 117
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 35/60 (58%), Gaps = 10/60 (16%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRR RVEMSN GR G RG R RP+ DD+CY+CG RGHYARDC
Sbjct: 68 ICGRRARVEMSN--------GGRGYGSRGPPPRSRLPPRPY--DDRCYDCGDRGHYARDC 117
>gi|71162370|sp|Q8BL97.1|SRSF7_MOUSE RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|26337671|dbj|BAC32521.1| unnamed protein product [Mus musculus]
Length = 267
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 49 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 108
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 109 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 148
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 101 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 148
>gi|30584739|gb|AAP36622.1| Homo sapiens splicing factor, arginine/serine-rich 7, 35kDa
[synthetic construct]
gi|60653769|gb|AAX29578.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
gi|60653771|gb|AAX29579.1| splicing factor arginine/serine-rich 7 35kDa [synthetic construct]
Length = 239
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|380815574|gb|AFE79661.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420741|gb|AFH33584.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948776|gb|AFI37993.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
Length = 235
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|395508189|ref|XP_003758396.1| PREDICTED: uncharacterized protein LOC100934570 [Sarcophilus
harrisii]
Length = 235
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 22 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 81
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 82 ELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 121
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 74 ICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 121
>gi|327262671|ref|XP_003216147.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Anolis carolinensis]
Length = 235
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|395846036|ref|XP_003795721.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Otolemur garnettii]
gi|351715512|gb|EHB18431.1| Splicing factor, arginine/serine-rich 7 [Heterocephalus glaber]
Length = 238
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|344288799|ref|XP_003416134.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Loxodonta africana]
Length = 238
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|72534660|ref|NP_001026854.1| serine/arginine-rich splicing factor 7 isoform 1 [Homo sapiens]
gi|307133718|ref|NP_001182515.1| splicing factor, arginine/serine-rich 7 [Macaca mulatta]
gi|307133726|ref|NP_001182519.1| splicing factor, arginine/serine-rich 7 [Pongo abelii]
gi|296224047|ref|XP_002757879.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Callithrix jacchus]
gi|332227248|ref|XP_003262805.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Nomascus leucogenys]
gi|332813155|ref|XP_515421.3| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
troglodytes]
gi|397493583|ref|XP_003817683.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Pan
paniscus]
gi|397493585|ref|XP_003817684.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Pan
paniscus]
gi|402890618|ref|XP_003908580.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Papio
anubis]
gi|403269672|ref|XP_003926840.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Saimiri boliviensis boliviensis]
gi|426335282|ref|XP_004029157.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1
[Gorilla gorilla gorilla]
gi|3929380|sp|Q16629.1|SRSF7_HUMAN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor 9G8; AltName: Full=Splicing factor,
arginine/serine-rich 7
gi|506402|gb|AAA35495.1| 9G8 splicing factor [Homo sapiens]
gi|950424|gb|AAA88098.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|12654349|gb|AAH00997.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|16924200|gb|AAH17369.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|17389794|gb|AAH17908.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|18490620|gb|AAH22328.1| Splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|27369421|gb|AAN87842.1| arginine/serine-rich splicing factor 7 type B [Homo sapiens]
gi|30582329|gb|AAP35391.1| splicing factor, arginine/serine-rich 7, 35kDa [Homo sapiens]
gi|46981983|gb|AAT08040.1| aging-associated protein 3 [Homo sapiens]
gi|61361883|gb|AAX42119.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|61361888|gb|AAX42120.1| splicing factor arginine/serine-rich 7 [synthetic construct]
gi|62702176|gb|AAX93102.1| unknown [Homo sapiens]
gi|67970972|dbj|BAE01828.1| unnamed protein product [Macaca fascicularis]
gi|90076474|dbj|BAE87917.1| unnamed protein product [Macaca fascicularis]
gi|119620771|gb|EAX00366.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_d [Homo
sapiens]
gi|261858750|dbj|BAI45897.1| splicing factor, arginine/serine-rich 7, 35kDa [synthetic
construct]
gi|292698389|dbj|BAI99737.1| splicing factor, arginine/serine-rich 7 [Homo sapiens]
gi|355565621|gb|EHH22050.1| hypothetical protein EGK_05239 [Macaca mulatta]
gi|355751260|gb|EHH55515.1| hypothetical protein EGM_04737 [Macaca fascicularis]
gi|380815572|gb|AFE79660.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|383420743|gb|AFH33585.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|384948778|gb|AFI37994.1| serine/arginine-rich splicing factor 7 isoform 1 [Macaca mulatta]
gi|410213320|gb|JAA03879.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251182|gb|JAA13558.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299022|gb|JAA28111.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|126304540|ref|XP_001362853.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 233
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|307133722|ref|NP_001182517.1| splicing factor, arginine/serine-rich 7 [Equus caballus]
gi|73980752|ref|XP_532939.2| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Canis
lupus familiaris]
gi|301777346|ref|XP_002924090.1| PREDICTED: splicing factor, arginine/serine-rich 7-like [Ailuropoda
melanoleuca]
gi|311252785|ref|XP_003125258.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Sus scrofa]
gi|410955427|ref|XP_003984355.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Felis
catus]
gi|426223793|ref|XP_004006058.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Ovis
aries]
gi|440907651|gb|ELR57771.1| Serine/arginine-rich splicing factor 7 [Bos grunniens mutus]
Length = 238
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574612|ref|XP_003473084.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Cavia porcellus]
Length = 235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774101|ref|NP_001182415.1| serine/arginine-rich splicing factor 7 isoform 3 [Mus musculus]
Length = 227
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774098|ref|NP_001182414.1| serine/arginine-rich splicing factor 7 isoform 2 [Mus musculus]
gi|26350021|dbj|BAC38650.1| unnamed protein product [Mus musculus]
Length = 235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|354488931|ref|XP_003506619.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Cricetulus
griseus]
Length = 227
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 12 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 71
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 111
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 64 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 111
>gi|148706559|gb|EDL38506.1| mCG17902, isoform CRA_e [Mus musculus]
gi|149050605|gb|EDM02778.1| rCG61762, isoform CRA_g [Rattus norvegicus]
Length = 215
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|431912751|gb|ELK14769.1| Splicing factor, arginine/serine-rich 7 [Pteropus alecto]
Length = 235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|77735509|ref|NP_001029449.1| serine/arginine-rich splicing factor 7 [Bos taurus]
gi|122146164|sp|Q3T106.1|SRSF7_BOVIN RecName: Full=Serine/arginine-rich splicing factor 7; AltName:
Full=Splicing factor, arginine/serine-rich 7
gi|74354545|gb|AAI02185.1| Splicing factor, arginine/serine-rich 7, 35kDa [Bos taurus]
gi|296482569|tpg|DAA24684.1| TPA: splicing factor, arginine/serine-rich 7 [Bos taurus]
Length = 235
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|306482694|ref|NP_001182375.1| serine/arginine-rich splicing factor 7 isoform 2 [Homo sapiens]
gi|297265844|ref|XP_002799298.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 3
[Macaca mulatta]
gi|332227250|ref|XP_003262806.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Nomascus leucogenys]
gi|390474551|ref|XP_003734800.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Callithrix jacchus]
gi|402890620|ref|XP_003908581.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Papio
anubis]
gi|403269674|ref|XP_003926841.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Saimiri boliviensis boliviensis]
gi|426335284|ref|XP_004029158.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Gorilla gorilla gorilla]
gi|119620770|gb|EAX00365.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_c [Homo
sapiens]
gi|383420739|gb|AFH33583.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|384948774|gb|AFI37992.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|387542062|gb|AFJ71658.1| serine/arginine-rich splicing factor 7 isoform 2 [Macaca mulatta]
gi|410213318|gb|JAA03878.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410251180|gb|JAA13557.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410299020|gb|JAA28110.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|348574614|ref|XP_003473085.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Cavia porcellus]
Length = 227
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|297265846|ref|XP_002799299.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 4
[Macaca mulatta]
Length = 208
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|348574616|ref|XP_003473086.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 3
[Cavia porcellus]
Length = 223
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|363731484|ref|XP_003640982.1| PREDICTED: uncharacterized protein LOC100859609 [Gallus gallus]
Length = 250
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|297265840|ref|XP_002799297.1| PREDICTED: splicing factor, arginine/serine-rich 7-like isoform 2
[Macaca mulatta]
Length = 165
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|22122585|ref|NP_666195.1| serine/arginine-rich splicing factor 7 isoform 1 [Mus musculus]
gi|306922410|ref|NP_001034124.2| splicing factor, arginine/serine-rich 7 [Rattus norvegicus]
gi|19343869|gb|AAH25529.1| Splicing factor, arginine/serine-rich 7 [Mus musculus]
gi|74202235|dbj|BAE23499.1| unnamed protein product [Mus musculus]
gi|74212267|dbj|BAE40291.1| unnamed protein product [Mus musculus]
gi|148706555|gb|EDL38502.1| mCG17902, isoform CRA_a [Mus musculus]
gi|149050602|gb|EDM02775.1| rCG61762, isoform CRA_d [Rattus norvegicus]
Length = 238
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|306774103|ref|NP_001182416.1| serine/arginine-rich splicing factor 7 isoform 4 [Mus musculus]
Length = 223
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|119620768|gb|EAX00363.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_a [Homo
sapiens]
gi|148706558|gb|EDL38505.1| mCG17902, isoform CRA_d [Mus musculus]
gi|149050600|gb|EDM02773.1| rCG61762, isoform CRA_b [Rattus norvegicus]
Length = 137
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|148706562|gb|EDL38509.1| mCG17902, isoform CRA_h [Mus musculus]
gi|149050603|gb|EDM02776.1| rCG61762, isoform CRA_e [Rattus norvegicus]
Length = 226
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|417407851|gb|JAA50519.1| Putative splicing factor arginine/serine-rich 7 35kda isoform cra
b, partial [Desmodus rotundus]
Length = 123
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 11 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 70
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 71 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 63 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
>gi|395846038|ref|XP_003795722.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2
[Otolemur garnettii]
Length = 226
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|344288801|ref|XP_003416135.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Loxodonta africana]
Length = 226
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|311252787|ref|XP_003125259.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Sus scrofa]
gi|345782230|ref|XP_003432237.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 1 [Canis
lupus familiaris]
gi|410955429|ref|XP_003984356.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Felis
catus]
gi|426223795|ref|XP_004006059.1| PREDICTED: serine/arginine-rich splicing factor 7 isoform 2 [Ovis
aries]
Length = 226
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|350538991|ref|NP_001232123.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
gi|197127816|gb|ACH44314.1| putative splicing factor arginine/serine-rich 7 variant 2
[Taeniopygia guttata]
Length = 250
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|148706556|gb|EDL38503.1| mCG17902, isoform CRA_b [Mus musculus]
gi|149050601|gb|EDM02774.1| rCG61762, isoform CRA_c [Rattus norvegicus]
Length = 209
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|194374435|dbj|BAG57113.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVI 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 73 CGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|150387449|gb|ABR68245.1| arginine/serine-rich 7 splicing factor [Cervus elaphus]
Length = 206
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 81/126 (64%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 1 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 60
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 61 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 108
Query: 154 HYARDC 159
HYA DC
Sbjct: 109 HYAYDC 114
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 67 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 114
>gi|119620769|gb|EAX00364.1| splicing factor, arginine/serine-rich 7, 35kDa, isoform CRA_b [Homo
sapiens]
Length = 132
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVI 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 73 CGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|344237407|gb|EGV93510.1| Splicing factor, arginine/serine-rich 7 [Cricetulus griseus]
Length = 227
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 9 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 68
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 69 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 108
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 61 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 108
>gi|15928796|gb|AAH14857.1| Sfrs7 protein [Mus musculus]
Length = 226
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I
Sbjct: 13 VYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVI 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 73 CGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|281350478|gb|EFB26062.1| hypothetical protein PANDA_013342 [Ailuropoda melanoleuca]
Length = 120
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 11 TGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 70
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 71 ELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 63 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
>gi|224046923|ref|XP_002199213.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Taeniopygia
guttata]
Length = 223
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 14/126 (11%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY +YV + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAV
Sbjct: 6 RYETKVYVGNL--GTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVL 63
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 64 GLDGKIICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 111
Query: 154 HYARDC 159
HYA DC
Sbjct: 112 HYAYDC 117
>gi|71897353|ref|NP_001026539.1| serine/arginine-rich splicing factor 7 [Gallus gallus]
gi|53127360|emb|CAG31063.1| hypothetical protein RCJMB04_1p22 [Gallus gallus]
Length = 223
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 14/126 (11%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY +YV + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAV
Sbjct: 6 RYETKVYVGNL--GTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVL 63
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 64 GLDGKIICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKG 111
Query: 154 HYARDC 159
HYA DC
Sbjct: 112 HYAYDC 117
>gi|432889402|ref|XP_004075259.1| PREDICTED: uncharacterized protein LOC101155211 [Oryzias latipes]
Length = 251
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 75/110 (68%), Gaps = 14/110 (12%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP+++VWVARNPPGF FVEFED RDAEDAV+G DG+ + G RVRVEM
Sbjct: 27 AAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEM 86
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S +GR R R F+P+DKCY+CG RGHYA DC
Sbjct: 87 STGLSRKGRG--------------RLSRRQFDPNDKCYQCGDRGHYAYDC 122
>gi|209155708|gb|ACI34086.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 129
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 77/120 (64%), Gaps = 14/120 (11%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + T + K ++E AF YYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRTVWIARNPPGFAFVEFEDTRDAEDAVRGLDGKLI 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRA-RGRPFNPDDKCYECGGRGHYARDC 159
+G RVRVE+S R R RA RPF+ +DKCYECG RGHYA DC
Sbjct: 73 SGSRVRVELSTGMPRRSRYE-------------RAPTNRPFDSNDKCYECGERGHYAYDC 119
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 14/61 (22%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRA-RGRPFNPDDKCYECGGRGHYARD 233
I+G RVRVE+S R R RA RPF+ +DKCYECG RGHYA D
Sbjct: 72 ISGSRVRVELSTGMPRRSRYE-------------RAPTNRPFDSNDKCYECGERGHYAYD 118
Query: 234 C 234
C
Sbjct: 119 C 119
>gi|410339103|gb|JAA38498.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
gi|410339105|gb|JAA38499.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 238
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R PF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPARC---PFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R PF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPARC---PFDPNDRCYECGEKGHYAYDC 119
>gi|449274552|gb|EMC83653.1| Splicing factor, arginine/serine-rich 7, partial [Columba livia]
Length = 197
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/112 (56%), Positives = 76/112 (67%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAV G DG+ I G RVRV
Sbjct: 11 TGAGKSELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVLGLDGKIICGSRVRV 70
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 71 EVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 63 ICGSRVRVEVSTGMPRRSRYD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 110
>gi|410339107|gb|JAA38500.1| serine/arginine-rich splicing factor 7 [Pan troglodytes]
Length = 226
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R PF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPARC---PFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|328908705|gb|AEB61020.1| serine/arginine-rich splicing factor 7-like protein [Equus
caballus]
Length = 238
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+A NPPGF FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIAGNPPGFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|262401189|gb|ACY66497.1| splicing factor arginine/serine-rich 7 [Scylla paramamosain]
Length = 119
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 86/112 (76%), Gaps = 11/112 (9%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ ++K+++E+AFSYYGP++NVWVARNPPGF FVEFED RDAEDAVRG DGR I GRRVRV
Sbjct: 16 SGASKQELEEAFSYYGPLRNVWVARNPPGFAFVEFEDVRDAEDAVRGLDGRTICGRRVRV 75
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S G+S R RG RGRPF+P+D+CYECG RGHYARDC
Sbjct: 76 ELST-----GKSRNRF------RGPPPRRGRPFHPEDRCYECGERGHYARDC 116
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 11/60 (18%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRRVRVE+S G+S R RG RGRPF+P+D+CYECG RGHYARDC
Sbjct: 68 ICGRRVRVELST-----GKSRNRF------RGPPPRRGRPFHPEDRCYECGERGHYARDC 116
>gi|172046468|emb|CAQ34906.1| SR family splicing factor 9G8 [Chironomus tentans]
Length = 216
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 85/128 (66%), Gaps = 11/128 (8%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDA 91
++R+ V + +++ K++IEDAFSYYGP+++VWVARNPPGF FVEFED RDAEDA
Sbjct: 7 MSRFPHDAKVYVGDLGSNADKQEIEDAFSYYGPLRSVWVARNPPGFAFVEFEDARDAEDA 66
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
VRG DGR I GRR RVE+ S G+S GYR P +D+CYECG
Sbjct: 67 VRGLDGRTICGRRARVEL---------STGKSAR--GYRSRGGRGRSPGRREDRCYECGN 115
Query: 152 RGHYARDC 159
RGH+ARDC
Sbjct: 116 RGHFARDC 123
>gi|357609122|gb|EHJ66310.1| arginine/serine-rich splicing factor 7 [Danaus plexippus]
Length = 174
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 78/112 (69%), Gaps = 10/112 (8%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+++K ++EDAFSYYGP++NVWVARNPPGF FVEFED RDAEDA+RG DGR I GRR RV
Sbjct: 16 NNASKPELEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAIRGLDGRTICGRRARV 75
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
EMSN + G R+R P DD+CY+CG RGHYARDC
Sbjct: 76 EMSNGGRGYGGR----------GPPPRSRLPPRPYDDRCYDCGDRGHYARDC 117
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I GRR RVEMSN + G R+R P DD+CY+CG RGHYARDC
Sbjct: 68 ICGRRARVEMSNGGRGYGGRGP----------PPRSRLPPRPYDDRCYDCGDRGHYARDC 117
>gi|194386188|dbj|BAG59658.1| unnamed protein product [Homo sapiens]
Length = 226
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFE RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEGPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
>gi|126309365|ref|XP_001367778.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Monodelphis
domestica]
Length = 235
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAV+
Sbjct: 6 RYGGETKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQ 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R PF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGLPRRSRYD---------RPPARC---PFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R PF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGLPRRSRYD---------RPPARC---PFDPNDRCYECGEKGHYAYDC 119
>gi|47224788|emb|CAG06358.1| unnamed protein product [Tetraodon nigroviridis]
Length = 226
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 74/110 (67%), Gaps = 14/110 (12%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP++ VWVARNPPGF FVEFED RDAEDAV+G DG+ + G RVRVEM
Sbjct: 25 AAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEM 84
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 85 STGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 120
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 14/60 (23%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ G RVRVEMS +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 75 LCGSRVRVEMSTGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|348523061|ref|XP_003449042.1| PREDICTED: hypothetical protein LOC100708809 [Oreochromis
niloticus]
Length = 240
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 75/110 (68%), Gaps = 14/110 (12%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP+++VWVARNPPGF FVEFED RDAEDAV+G DG+ + G RVRVEM
Sbjct: 27 AAKGELERAFSYYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKVLCGSRVRVEM 86
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 87 STGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 122
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 14/58 (24%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G RVRVEMS +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 79 GSRVRVEMSTGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 122
>gi|410910550|ref|XP_003968753.1| PREDICTED: uncharacterized protein LOC101078845 [Takifugu rubripes]
Length = 222
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 74/110 (67%), Gaps = 14/110 (12%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP++ VWVARNPPGF FVEFED RDAEDAV+G DG+ + G RVRVEM
Sbjct: 25 AAKGELERAFSYYGPLRTVWVARNPPGFAFVEFEDPRDAEDAVKGMDGKLLCGSRVRVEM 84
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 85 STGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 120
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 14/60 (23%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ G RVRVEMS +GR R R F+P+D+CY+CG RGHYA DC
Sbjct: 75 LCGSRVRVEMSTGLSRKGRG--------------RPSRRQFDPNDRCYQCGDRGHYAYDC 120
>gi|395533733|ref|XP_003768907.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Sarcophilus
harrisii]
Length = 235
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAV+
Sbjct: 6 RYGGETKVYVGNLETGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVQ 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R PF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGLPRRSRYD---------RPPARC---PFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R PF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGLPRRSRYD---------RPPARC---PFDPNDRCYECGEKGHYAYDC 119
>gi|21749793|dbj|BAC03661.1| unnamed protein product [Homo sapiens]
Length = 137
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 80/126 (63%), Gaps = 12/126 (9%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY V + T + K ++E AFSYYGP++ VW+ARNPP F FVEFED RDAEDAVR
Sbjct: 6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPRFAFVEFEDPRDAEDAVR 65
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G DG+ I G RVRVE+S R R + R R RPF+P+D+CYECG +G
Sbjct: 66 GLDGKVICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKG 113
Query: 154 HYARDC 159
HYA DC
Sbjct: 114 HYAYDC 119
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + R R RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRFD---------RPPAR---RPFDPNDRCYECGEKGHYAYDC 119
>gi|71834670|ref|NP_001025438.1| serine/arginine-rich splicing factor 7 [Danio rerio]
gi|66911407|gb|AAH97250.1| Splicing factor, arginine/serine-rich 7 [Danio rerio]
Length = 178
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 74/112 (66%), Gaps = 12/112 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K ++E AF YYGP+++VW+ARNP GF FVEFED RDAED+VRG DG+ I G RVRV
Sbjct: 20 TGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGKVICGSRVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S R R + RPF+P+D+CYECG +GHYA DC
Sbjct: 80 ELSTGMPRRSRYDHPPS------------RRPFDPNDRCYECGEKGHYAYDC 119
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 175 INGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
I G RVRVE+S R R + RPF+P+D+CYECG +GHYA DC
Sbjct: 72 ICGSRVRVELSTGMPRRSRYDHPPSR------------RPFDPNDRCYECGEKGHYAYDC 119
>gi|45387765|ref|NP_991236.1| splicing factor, arginine/serine-rich 7 [Danio rerio]
gi|41350982|gb|AAH65586.1| Zgc:77155 [Danio rerio]
Length = 258
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 74/110 (67%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP+++VWVARNPPGF FVE+ED RDAEDAV+G DG+ + G RVRVE+
Sbjct: 25 AAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDARDAEDAVKGMDGKVLCGARVRVEL 84
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
SN + R R R F+P+D+CY+CG GHYA DC
Sbjct: 85 SNGMSRKSRYG-------------RPSRRQFDPNDRCYQCGETGHYAYDC 121
>gi|126631485|gb|AAI33852.1| Sfrs7 protein [Danio rerio]
Length = 210
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 76/119 (63%), Gaps = 12/119 (10%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + T + K ++E AF YYGP+++VW+ARNP GF FVEFED RDAED+VRG DG+ I
Sbjct: 13 VYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGKVI 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
G RVRVE+S R R + RPF+P+D+CYECG +GHYA DC
Sbjct: 73 CGSRVRVELSTGMPRRSRYDHPPS------------RRPFDPNDRCYECGEKGHYAYDC 119
>gi|209153932|gb|ACI33198.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 223
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP++ VWVARNPPGF FVE+ED RDAEDAV+G DG+ + G R+RVE+
Sbjct: 27 AAKGELERAFSYYGPLRTVWVARNPPGFAFVEYEDARDAEDAVKGMDGKVLCGSRIRVEL 86
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + + R R F+P D+CY+CG RGHYA DC
Sbjct: 87 STGMSRKTKHG-------------RPSRRHFDPQDRCYQCGDRGHYAYDC 123
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 37/79 (46%), Gaps = 17/79 (21%)
Query: 156 ARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF 215
ARD G G+ LC G R+RVE+S + + R R F
Sbjct: 62 ARDAEDAVKGMDGK-VLC---GSRIRVELSTGMSRKTKHG-------------RPSRRHF 104
Query: 216 NPDDKCYECGGRGHYARDC 234
+P D+CY+CG RGHYA DC
Sbjct: 105 DPQDRCYQCGDRGHYAYDC 123
>gi|225706912|gb|ACO09302.1| Splicing factor, arginine/serine-rich 7 [Osmerus mordax]
Length = 208
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP+++VWVARNPPGF FVE+ED RDAEDAV+G DG+ + G R+RVE+
Sbjct: 26 AAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDTRDAEDAVKGMDGKVLCGARIRVEL 85
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + R R R F+P+D+CY+CG GHYA DC
Sbjct: 86 STGMSRKSRYG-------------RPSRRNFDPNDRCYQCGESGHYAYDC 122
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 13/58 (22%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G R+RVE+S + R R R F+P+D+CY+CG GHYA DC
Sbjct: 78 GARIRVELSTGMSRKSRYG-------------RPSRRNFDPNDRCYQCGESGHYAYDC 122
>gi|221220302|gb|ACM08812.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 256
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AFSYYGP+++VWVARNPPGF FVE+ED RDAEDA +G DG+ + G R+RVE+
Sbjct: 26 AAKGELERAFSYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGSRIRVEL 85
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + R R R F+P+D+CY+CG GHYA DC
Sbjct: 86 STGMSRKSRYG-------------RPSRRHFDPNDRCYQCGESGHYAYDC 122
>gi|221221656|gb|ACM09489.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 272
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AF+YYGP+++VWVARNPPGF FVE+ED RDAEDA +G DG+ + G R+RVE+
Sbjct: 26 AAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGARIRVEL 85
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 86 STGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G R+RVE+S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 78 GARIRVELSTGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
>gi|432106513|gb|ELK32262.1| Serine/arginine-rich splicing factor 7 [Myotis davidii]
Length = 226
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 12/113 (10%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
+T + K ++E AFSYYGP+ VW+ARNPPGF FV FED RDAEDAVRG DG+ I RVR
Sbjct: 25 ATGAGKGELERAFSYYGPLTTVWIARNPPGFAFVGFEDPRDAEDAVRGLDGKVICDSRVR 84
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
VE+S R Y AR PF+P+D+CYECG +GHYA C
Sbjct: 85 VELSTGMPR-----------RSYLDRPPAR-HPFDPNDRCYECGEKGHYAYYC 125
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AF+YYGP+++VWVARNPPGF FVE+ED RDAEDA +G DG+ + G R+RVE+
Sbjct: 26 AAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGARIRVEL 85
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 86 STGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G R+RVE+S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 78 GARIRVELSTGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
>gi|221220242|gb|ACM08782.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 260
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 73/110 (66%), Gaps = 13/110 (11%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++E AF+YYGP+++VWVARNPPGF FVE+ED RDAEDA +G DG+ + G R+RVE+
Sbjct: 26 AAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGKVLCGARIRVEL 85
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 86 STGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G R+RVE+S + R + R R F+P+D+CY+CG GHYA DC
Sbjct: 78 GARIRVELSTGMSRKSRHD-------------RPSRRHFDPNDRCYQCGENGHYAYDC 122
>gi|198422995|ref|XP_002122454.1| PREDICTED: zinc finger (CCHC)-24 isoform 2 [Ciona intestinalis]
Length = 205
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 77/121 (63%), Gaps = 14/121 (11%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + S+S+T+ D+E F YYG + NVWVA++PPGF +VEFED RDA+DA++G DG+
Sbjct: 7 IYVGNL--SSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E++GRR+RVE S+ G R R F+P D+CY CG GHYA D
Sbjct: 65 ELHGRRIRVERSH------------GMPRNRGSDRDRSRRAFHPSDRCYNCGETGHYAYD 112
Query: 159 C 159
C
Sbjct: 113 C 113
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 12/61 (19%)
Query: 174 KINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 233
+++GRR+RVE S+ G R R F+P D+CY CG GHYA D
Sbjct: 65 ELHGRRIRVERSH------------GMPRNRGSDRDRSRRAFHPSDRCYNCGETGHYAYD 112
Query: 234 C 234
C
Sbjct: 113 C 113
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 77/128 (60%), Gaps = 19/128 (14%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++++E AFSYYGP+K+VWVARNPPGF FVEFED RDA+D+VRG DG + G RVRVE+
Sbjct: 41 AQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGSSLCGTRVRVEL 100
Query: 110 SNPQKMRGR------------------SNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
S K+R + G RPF+P D+C+ECGG
Sbjct: 101 ST-GKVRPKPWMRRGPPGRDGGRDGDRGRDGGRDGGRGGGDRDRSRRPFDPADRCFECGG 159
Query: 152 RGHYARDC 159
RGHYA DC
Sbjct: 160 RGHYAYDC 167
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/21 (76%), Positives = 19/21 (90%)
Query: 214 PFNPDDKCYECGGRGHYARDC 234
PF+P D+C+ECGGRGHYA DC
Sbjct: 147 PFDPADRCFECGGRGHYAYDC 167
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 182
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 72/112 (64%), Gaps = 13/112 (11%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+ TK +IE AFSYYGP++NVWVARNPPGF FVEFED RDA DA RG D ++ G +R
Sbjct: 22 TNGTKHEIERAFSYYGPLRNVWVARNPPGFAFVEFEDPRDASDACRGLDKTKLCGVEIRA 81
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S+ K R GR R + +++CYECG RGH+ARDC
Sbjct: 82 ELSS-GKSRWAKWGRPPPRRSFS------------EERCYECGKRGHFARDC 120
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + S+S+T+ D+E F YYG + NVWVA++PPGF +VEFED RDA+DA++G DG+
Sbjct: 7 IYVGNL--SSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 64
Query: 99 EINGRRVRVEMSNPQ-KMRGRSNGR-SGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
E++GRR+RVE S+ + RG R S G R F+P D+CY CG GHYA
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 124
Query: 157 RDC 159
DC
Sbjct: 125 YDC 127
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 174 KINGRRVRVEMSNPQ-KMRGRSNGR-SGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 231
+++GRR+RVE S+ + RG R S G R F+P D+CY CG GHYA
Sbjct: 65 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 124
Query: 232 RDC 234
DC
Sbjct: 125 YDC 127
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 4/123 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + S+S+T+ D+E F YYG + NVWVA++PPGF +VEFED RDA+DA++G DG+
Sbjct: 15 IYVGNL--SSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKGLDGK 72
Query: 99 EINGRRVRVEMSNPQ-KMRGRSNGR-SGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
E++GRR+RVE S+ + RG R S G R F+P D+CY CG GHYA
Sbjct: 73 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 132
Query: 157 RDC 159
DC
Sbjct: 133 YDC 135
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 174 KINGRRVRVEMSNPQ-KMRGRSNGR-SGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 231
+++GRR+RVE S+ + RG R S G R F+P D+CY CG GHYA
Sbjct: 73 ELHGRRIRVERSHGMPRNRGSDRDRPSFGGGRGGDGGGGSRRAFHPSDRCYNCGETGHYA 132
Query: 232 RDC 234
DC
Sbjct: 133 YDC 135
>gi|260826882|ref|XP_002608394.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
gi|229293745|gb|EEN64404.1| hypothetical protein BRAFLDRAFT_230000 [Branchiostoma floridae]
Length = 132
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 72/113 (63%), Gaps = 12/113 (10%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + ++ D FSYYGP++NVWVARNPPGF FVEFED RDA+DAV+ D REI G RV
Sbjct: 25 TRGNERELRDIFSYYGPLRNVWVARNPPGFAFVEFEDPRDAKDAVKHLDRREICGAPARV 84
Query: 108 EMSNPQKMRGRSNGRSGGDRG-YRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
EMS GG R Y RPF+P D+CYECG RGHYARDC
Sbjct: 85 EMST-----------GGGRRSRYGPPPPYYRRPFDPLDRCYECGERGHYARDC 126
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/20 (80%), Positives = 18/20 (90%)
Query: 215 FNPDDKCYECGGRGHYARDC 234
F+P D+CYECG RGHYARDC
Sbjct: 107 FDPLDRCYECGERGHYARDC 126
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus kowalevskii]
Length = 179
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 77/112 (68%), Gaps = 7/112 (6%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+ T+ ++E AFSYYGP++NVWV+RNPPGF F+EFED RDA DA+RG D R + G VRV
Sbjct: 20 TNGTRHELEKAFSYYGPLRNVWVSRNPPGFAFIEFEDARDASDAIRGLDKRRVCGVEVRV 79
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E+S+ G+S GG G R R F+ +++CYECG GH+ARDC
Sbjct: 80 ELSS-----GKSRRGGGGGGRGGGRPPQR-RSFS-EERCYECGKHGHFARDC 124
>gi|198434016|ref|XP_002131866.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 4 [Ciona intestinalis]
Length = 301
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T +++ED+E+ FSYYG + +VWVARNPPGF +V FED RDA+DAVRG DG+ I R+VRV
Sbjct: 21 THASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRV 80
Query: 108 EMSNPQKM-RGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
++SN + R G + DR Y G R F D +CY C GH+ARDC
Sbjct: 81 DISNSRSTGRPARRGPAPYDR-YGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434010|ref|XP_002131854.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 1 [Ciona intestinalis]
gi|198434012|ref|XP_002131856.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 2 [Ciona intestinalis]
Length = 342
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T +++ED+E+ FSYYG + +VWVARNPPGF +V FED RDA+DAVRG DG+ I R+VRV
Sbjct: 21 THASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRV 80
Query: 108 EMSNPQKM-RGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
++SN + R G + DR Y G R F D +CY C GH+ARDC
Sbjct: 81 DISNSRSTGRPARRGPAPYDR-YGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434018|ref|XP_002131881.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 5 [Ciona intestinalis]
Length = 273
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T +++ED+E+ FSYYG + +VWVARNPPGF +V FED RDA+DAVRG DG+ I R+VRV
Sbjct: 21 THASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRV 80
Query: 108 EMSNPQKM-RGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
++SN + R G + DR Y G R F D +CY C GH+ARDC
Sbjct: 81 DISNSRSTGRPARRGPAPYDR-YGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|198434014|ref|XP_002131863.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 7
(Splicing factor 9G8) isoform 3 [Ciona intestinalis]
Length = 311
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T +++ED+E+ FSYYG + +VWVARNPPGF +V FED RDA+DAVRG DG+ I R+VRV
Sbjct: 21 THASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDARDAKDAVRGLDGKIICDRKVRV 80
Query: 108 EMSNPQKM-RGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
++SN + R G + DR Y G R F D +CY C GH+ARDC
Sbjct: 81 DISNSRSTGRPARRGPAPYDR-YGGGGGGGNRGFRSDMRCYNCSETGHFARDC 132
>gi|358335617|dbj|GAA32504.2| serine/arginine-rich splicing factor 7, partial [Clonorchis
sinensis]
Length = 145
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
++ +IE F YG +KNVWVARNPPGF FVEFED DA++AVR DG + G R RVE+
Sbjct: 2 ASDREIERIFRDYGRLKNVWVARNPPGFAFVEFEDLADAQEAVRELDGTVMCGVRARVEL 61
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
S+ + + D G R RGRPF+P D+CYECG RGHYA DCR RR+GG
Sbjct: 62 SSGKSRQKPWLRGGVRDGGGRDFGGRRGRPFDPSDRCYECGERGHYAYDCR-RRNGG 117
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Query: 214 PFNPDDKCYECGGRGHYARDCRSRRSGG 241
PF+P D+CYECG RGHYA DCR RR+GG
Sbjct: 91 PFDPSDRCYECGERGHYAYDCR-RRNGG 117
>gi|332018153|gb|EGI58759.1| Splicing factor, arginine/serine-rich 7 [Acromyrmex echinatior]
Length = 221
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K+ +EDAFSYYGP++NVWVARNPPGF FVEFED RDAEDAVRG DGR + GRR V
Sbjct: 74 SSASKQQLEDAFSYYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGRILCGRRGPV 133
Query: 108 EMSNPQKMRGRSNGRS 123
NP + R +GR
Sbjct: 134 RDQNPNQDHDRDHGRD 149
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 94/162 (58%), Gaps = 9/162 (5%)
Query: 31 MIARYMLV-IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAE 89
M ARY V V I +++ ++E F YG ++NVWVARNPPGF FVEFED DA
Sbjct: 1 MAARYRDVGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADAS 60
Query: 90 DAVRGFDGREINGRRVRVEMSNPQK-----MRGRSNGRSGGDRGYRGSVRARGRPFNPDD 144
DAVR DG + G R RVE+S + +RG + G D G GS R +PF+P D
Sbjct: 61 DAVRELDGTVMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNG-PGSRRM--KPFDPAD 117
Query: 145 KCYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSN 186
+CYECG RGHYA DCR R G G+ + +GRR +SN
Sbjct: 118 RCYECGERGHYAYDCRRRGGGPGGQNGRSRPDGRRRSRSVSN 159
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 211 RGRPFNPDDKCYECGGRGHYARDC 234
R +PF+P D+CYECG RGHYA DC
Sbjct: 109 RMKPFDPADRCYECGERGHYAYDC 132
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 91/164 (55%), Gaps = 11/164 (6%)
Query: 31 MIARYMLV-IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAE 89
M ARY V V I +++ ++E F YG ++NVWVARNPPGF FVEFED DA
Sbjct: 1 MAARYRDVGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADAS 60
Query: 90 DAVRGFDGREINGRRVRVEMSNPQKMR-------GRSNGRSGGDRGYRGSVRARGRPFNP 142
DAVR DG + G R RVE+S + + G + G D G GS R +PF+P
Sbjct: 61 DAVRELDGTVMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGI-GSRRM--KPFDP 117
Query: 143 DDKCYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSN 186
D+CYECG RGHYA DCR R G G + GRR +SN
Sbjct: 118 TDRCYECGERGHYAYDCRRRGGGPGGPNGRSRPEGRRRSRSVSN 161
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 211 RGRPFNPDDKCYECGGRGHYARDC 234
R +PF+P D+CYECG RGHYA DC
Sbjct: 111 RMKPFDPTDRCYECGERGHYAYDC 134
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 91/155 (58%), Gaps = 9/155 (5%)
Query: 31 MIARYMLV-IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAE 89
M ARY V V I +++ ++E F YG ++NVWVARNPPGF FVEFED DA
Sbjct: 1 MAARYRDVGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADAS 60
Query: 90 DAVRGFDGREINGRRVRVEMSNPQK-----MRGRSNGRSGGDRGYRGSVRARGRPFNPDD 144
DAVR DG + G R RVE+S + +RG + G D G GS R +PF+P D
Sbjct: 61 DAVRELDGTVMCGVRARVELSTGKSRQKPWVRGGARNGGGRDNG-PGSRRM--KPFDPAD 117
Query: 145 KCYECGGRGHYARDCRSRRSGGSGRPELCKINGRR 179
+CYECG RGHYA DCR R G G+ + +GRR
Sbjct: 118 RCYECGERGHYAYDCRRRGGGPGGQNGRSRPDGRR 152
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 211 RGRPFNPDDKCYECGGRGHYARDC 234
R +PF+P D+CYECG RGHYA DC
Sbjct: 109 RMKPFDPADRCYECGERGHYAYDC 132
>gi|225712010|gb|ACO11851.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K ++EDAFS YGP+KNVWVARNPPGF FVEFED RDAED+VRG DG + G+RVRV
Sbjct: 20 NSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRV 79
Query: 108 EMSNPQ 113
EMS+ Q
Sbjct: 80 EMSSGQ 85
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 80/137 (58%), Gaps = 11/137 (8%)
Query: 31 MIARYMLV-IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAE 89
M ARY V V I +++ ++E F YG ++NVWVARNPPGF FVEFED DA
Sbjct: 1 MAARYRDVGTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADAS 60
Query: 90 DAVRGFDGREINGRRVRVEMSNPQKMR-------GRSNGRSGGDRGYRGSVRARGRPFNP 142
DAVR DG + G R RVE+S + + G + G D G GS R +PF+P
Sbjct: 61 DAVRELDGTVMCGVRARVELSTGKSRQKPWVRGGGGARNGGGRDNGI-GSRRM--KPFDP 117
Query: 143 DDKCYECGGRGHYARDC 159
D+CYECG RGHYA DC
Sbjct: 118 TDRCYECGERGHYAYDC 134
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 211 RGRPFNPDDKCYECGGRGHYARDC 234
R +PF+P D+CYECG RGHYA DC
Sbjct: 111 RMKPFDPTDRCYECGERGHYAYDC 134
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 80/128 (62%), Gaps = 4/128 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ++ K D+E F YG +++VW+ARNPPGF FVEFE RDA DAVRG DGR
Sbjct: 10 VYVGDL--GNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRG--RSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
+ GRR RVE+S + R G GG G R RG DDKCYECGGRGH+A
Sbjct: 68 TVCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFA 127
Query: 157 RDCRSRRS 164
R CR R++
Sbjct: 128 RHCRERKA 135
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 18/20 (90%)
Query: 220 KCYECGGRGHYARDCRSRRS 239
KCYECGGRGH+AR CR R++
Sbjct: 116 KCYECGGRGHFARHCRERKA 135
>gi|156354446|ref|XP_001623405.1| predicted protein [Nematostella vectensis]
gi|156210100|gb|EDO31305.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 22/124 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +Y+ + +++K +IE F +GP+++VWVARNPPGF F FEDRRDAEDAVR
Sbjct: 1 MSRVYIGNI--GDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVREL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DGR I G+R RVE++ +G R R R + ++KCYECG GH+
Sbjct: 59 DGRYICGQRARVELA-------------------KGPSRGRPRQAS-NEKCYECGRVGHF 98
Query: 156 ARDC 159
ARDC
Sbjct: 99 ARDC 102
>gi|225710746|gb|ACO11219.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 152
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K ++EDAFS YGP+KNVWVARNPPGF FVEFED RDAED+VRG DG + G+RVRV
Sbjct: 20 NSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRV 79
Query: 108 EMSNPQ 113
EMS+ Q
Sbjct: 80 EMSSGQ 85
>gi|290561220|gb|ADD38012.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 152
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 56/66 (84%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K ++EDAFS YGP+KNVWVARNPPGF FVEFED RDAED+VRG DG + G+RVRV
Sbjct: 20 NSASKYELEDAFSKYGPLKNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRVCGQRVRV 79
Query: 108 EMSNPQ 113
EMS+ Q
Sbjct: 80 EMSSGQ 85
>gi|270000727|gb|EEZ97174.1| hypothetical protein TcasGA2_TC004361 [Tribolium castaneum]
Length = 123
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|91094467|ref|XP_976127.1| PREDICTED: similar to AGAP007325-PA isoform 5 [Tribolium castaneum]
Length = 111
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|91094459|ref|XP_967049.1| PREDICTED: similar to AGAP007325-PA isoform 1 [Tribolium castaneum]
Length = 129
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 53/64 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 47 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 106
Query: 108 EM 109
EM
Sbjct: 107 EM 108
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V + +S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG
Sbjct: 7 WDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRG 66
Query: 95 FDGREINGRRVRVEM 109
DG G R+RVEM
Sbjct: 67 LDGTRCCGTRIRVEM 81
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K D+E F YG +++VW+ARNPPGF FVEFE RDA DAVRG DGR + GRR RVE+S
Sbjct: 21 KNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRRARVELST 80
Query: 112 PQKMRG----RSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ R G GG G G G DDKCYECGGRGH+AR C
Sbjct: 81 GKYARSGGGAGGGGGGGGGGGGAGGRDRGGAGGRGDDKCYECGGRGHFARHC 132
>gi|225714302|gb|ACO12997.1| Splicing factor, arginine/serine-rich 7 [Lepeophtheirus salmonis]
Length = 306
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
+ + S+TK D+E F +GP+K +W+AR+ P F FV F R DAED VR DG EI
Sbjct: 165 IHVADLDVSATKRDMEKVFGKFGPLKEIWMARSVPCFAFVVFRYREDAEDGVRSADGVEI 224
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+GRR+RV + P R+ G RG RG FNP+ +CY+CG RGH++RDC
Sbjct: 225 SGRRIRVTHARP-----RTKG-----RGRRG--------FNPNMRCYQCGDRGHFSRDC 265
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 18/62 (29%)
Query: 173 CKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 232
+I+GRR+RV + P R+ GR G RG FNP+ +CY+CG RGH++R
Sbjct: 222 VEISGRRIRVTHARP-----RTKGR-----GRRG--------FNPNMRCYQCGDRGHFSR 263
Query: 233 DC 234
DC
Sbjct: 264 DC 265
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 82/124 (66%), Gaps = 5/124 (4%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +++ ++E+AFS YG +KNVWVARNPPGF FV FED RDA DA + D R + G RVRV
Sbjct: 25 SGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDRNVCGVRVRV 84
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNP---DDKCYECGGRGHYARDC--RSR 162
EMS+ + R R G GGDRG+RG G +++CYECG RGH+ARDC R R
Sbjct: 85 EMSSGESRRSRDRGDRGGDRGHRGGGGFMGGRRGGMRDNERCYECGQRGHFARDCDRRGR 144
Query: 163 RSGG 166
GG
Sbjct: 145 SPGG 148
>gi|294653211|gb|ADF28513.1| rbp1-like RNA-binding protein PB [Pelinobius muticus]
Length = 134
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 51/62 (82%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+TK+DIE FS YGPI+NVWVARNPPGF FVEFED RDAEDAV+ DG I G RVRVEM
Sbjct: 22 ATKDDIEAVFSRYGPIRNVWVARNPPGFAFVEFEDSRDAEDAVKALDGTRICGARVRVEM 81
Query: 110 SN 111
S+
Sbjct: 82 SH 83
>gi|432114048|gb|ELK36095.1| Heterogeneous nuclear ribonucleoprotein L-like protein [Myotis
davidii]
Length = 628
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T + K + E AFSYYGP+++VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RVRV
Sbjct: 29 TGAGKGEYERAFSYYGPLRSVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV 88
Query: 108 EMSNPQKMRGR 118
E+S R R
Sbjct: 89 ELSTGMPRRSR 99
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ++ K D+E F YG +++VW+ARNPPGF FVEFE RDA DAVRG DGR
Sbjct: 10 VYVGDL--GNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRG--RSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
+ GRR RVE+S + R G GG G R RG DDKCYECGGRGH+A
Sbjct: 68 TVCGRRARVELSTGKYARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFA 127
Query: 157 RDC 159
R C
Sbjct: 128 RHC 130
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKHEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|119389969|pdb|2HVZ|A Chain A, Solution Structure Of The Rrm Domain Of Sr Rich Factor 9g8
Length = 101
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 55/75 (73%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED RDAEDAVRG DG+ I G RV
Sbjct: 8 LGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRV 67
Query: 106 RVEMSNPQKMRGRSN 120
RVE+S R R +
Sbjct: 68 RVELSTGMPRRSRFD 82
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 NSASKHEIETAFSKYGPLRNVWVARNPPGFAFVEFEDSRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 55/75 (73%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V + +S++K +IE+AFS YGP+KNVWVARNPPGF FVEFEDRRDAEDA R
Sbjct: 7 WDLACKVYVGNLGSSASKYEIENAFSKYGPLKNVWVARNPPGFAFVEFEDRRDAEDATRA 66
Query: 95 FDGREINGRRVRVEM 109
DG G R+RVEM
Sbjct: 67 LDGTRCCGTRIRVEM 81
>gi|198430457|ref|XP_002119659.1| PREDICTED: similar to splicing factor, arginine/serine-rich 3
[Ciona intestinalis]
Length = 185
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 51/67 (76%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K ++E F YYG +KNVWVARNPPGF FVEFED RDAEDAVR DGR + G R RVEMS
Sbjct: 23 SKNELERVFGYYGALKNVWVARNPPGFAFVEFEDNRDAEDAVRALDGRTVCGVRARVEMS 82
Query: 111 NPQKMRG 117
+ Q RG
Sbjct: 83 SGQSRRG 89
>gi|332027347|gb|EGI67431.1| RNA-binding protein 1 [Acromyrmex echinatior]
Length = 133
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|375073655|gb|AFA34386.1| Rbp-1 RNA binding protein 1 isoform A, partial [Ostrea edulis]
Length = 123
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 50/62 (80%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K ++ED FS YGPI+NVWVARNPPGF FVEF+D RD EDA + DG INGRRVRVEM
Sbjct: 8 AAKYELEDVFSRYGPIRNVWVARNPPGFAFVEFQDTRDVEDATKALDGTRINGRRVRVEM 67
Query: 110 SN 111
S+
Sbjct: 68 SS 69
>gi|380012960|ref|XP_003690540.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 191
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRVE
Sbjct: 52 SASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVE 111
Query: 109 M 109
M
Sbjct: 112 M 112
>gi|225711580|gb|ACO11636.1| Splicing factor, arginine/serine-rich 7 [Caligus rogercresseyi]
Length = 332
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
+ + S++K D+E F +GP+K +W+AR+ P F F F R DAEDAVR DG E+
Sbjct: 192 IHVADLDVSASKRDMEKVFGKFGPLKEIWMARSVPCFAFCVFRYREDAEDAVRTSDGTEV 251
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+GRR+RV + P R+ G RG RG FNP+ +CY+CG RGH++RDC
Sbjct: 252 SGRRIRVTHARP-----RTKG-----RGRRG--------FNPNMRCYQCGDRGHFSRDC 292
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 18/62 (29%)
Query: 173 CKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 232
+++GRR+RV + P R+ GR G RG FNP+ +CY+CG RGH++R
Sbjct: 249 TEVSGRRIRVTHARP-----RTKGR-----GRRG--------FNPNMRCYQCGDRGHFSR 290
Query: 233 DC 234
DC
Sbjct: 291 DC 292
>gi|380012958|ref|XP_003690539.1| PREDICTED: uncharacterized protein LOC100863202 [Apis florea]
Length = 193
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 50/61 (81%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRVE
Sbjct: 52 SASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRVE 111
Query: 109 M 109
M
Sbjct: 112 M 112
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|328777412|ref|XP_397274.4| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 193
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 51 NSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 110
Query: 108 EM 109
EM
Sbjct: 111 EM 112
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|240848709|ref|NP_001155652.1| RNA-binding protein-like [Acyrthosiphon pisum]
gi|239788597|dbj|BAH70971.1| ACYPI006120 [Acyrthosiphon pisum]
Length = 135
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 4/106 (3%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I +++ K +IED F+ YGP+KN+W+ARNPPGF F+E+ED RDAEDAVRG DG
Sbjct: 13 VYIGNLKSNANKYEIEDLFTKYGPLKNIWIARNPPGFAFIEYEDPRDAEDAVRGLDGTRC 72
Query: 101 NGRRVRVEMSNPQKMRGRS---NGRSGGD-RGYRGSVRARGRPFNP 142
G R+ V+MS ++ R +S GRS RGYR +++ R +P
Sbjct: 73 CGSRIIVQMSTGKRSRDKSPVHRGRSSPPRRGYRSYSKSQSRSRSP 118
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|328777414|ref|XP_003249337.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
mellifera]
Length = 177
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 51 NSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 110
Query: 108 EM 109
EM
Sbjct: 111 EM 112
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|389615269|dbj|BAM20617.1| RNA-binding protein [Papilio polytes]
Length = 159
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSNPQKMRGR 118
EMSN + R R
Sbjct: 80 EMSNGRTRRDR 90
>gi|222137596|gb|ACM45325.1| rbp1-like RNA-binding protein PB [Bombyx mori]
Length = 159
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSNPQKMRGR 118
EMSN + R R
Sbjct: 80 EMSNGRTRRDR 90
>gi|170033187|ref|XP_001844460.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873739|gb|EDS37122.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 159
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF YGP++NVWVARNPPGF FVEFED+RDAEDA R DG+ G R+RV
Sbjct: 20 SSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDACRSLDGQRCCGTRIRV 79
Query: 108 EMSN 111
EMS+
Sbjct: 80 EMSS 83
>gi|307187926|gb|EFN72839.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 213
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K ++E FS YGP++N+WVARNPPGF FVEFED RDAEDAVRG DG + G RVRV
Sbjct: 20 SSASKHELEGKFSKYGPLRNIWVARNPPGFAFVEFEDPRDAEDAVRGLDGVHLCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AF+ YGP++NVWVARNPPGF FVEFEDRRDAEDA R DG G R+RV
Sbjct: 20 SSASKYEIENAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|195107293|ref|XP_001998248.1| GI23736 [Drosophila mojavensis]
gi|193914842|gb|EDW13709.1| GI23736 [Drosophila mojavensis]
Length = 137
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP+KNVW+ARNPPGF FVEFEDRRDAEDA R DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLKNVWIARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|291228272|ref|XP_002734102.1| PREDICTED: transformer-2 sex-determining protein, putative-like
[Saccoglossus kowalevskii]
Length = 204
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + K ++E AFS+YGP++NVWVARNPPGF FVEFED RDA D+VRG DGR I GRRVRV
Sbjct: 21 SGAAKHELERAFSHYGPLRNVWVARNPPGFAFVEFEDPRDASDSVRGLDGRVICGRRVRV 80
Query: 108 EMSN 111
E S+
Sbjct: 81 EQSS 84
>gi|221112058|ref|XP_002166471.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Hydra magnipapillata]
Length = 206
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 69/113 (61%), Gaps = 18/113 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E F ++G ++ VWVARNPPGFGF+ F+D RDAEDA+R DGR + G RVRVE
Sbjct: 13 ASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDGRRVCGMRVRVE- 71
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
K RG ++ R R ++KCY CG GH +RDCRSR
Sbjct: 72 ----KARGPNSNN-------------RNRSSAQNEKCYNCGKIGHLSRDCRSR 107
>gi|328793355|ref|XP_001123058.2| PREDICTED: RNA-binding protein 1-like [Apis mellifera]
Length = 150
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 24 NSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 83
Query: 108 EM 109
EM
Sbjct: 84 EM 85
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 24 NSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 83
Query: 108 EM 109
EM
Sbjct: 84 EM 85
>gi|449672683|ref|XP_004207769.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Hydra magnipapillata]
Length = 189
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 18/113 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E F ++G ++ VWVARNPPGFGF+ F+D RDAEDA+R DGR + G RVRVE
Sbjct: 13 ASRTELEREFEHFGSMREVWVARNPPGFGFIVFDDPRDAEDAIREMDGRRVCGMRVRVEK 72
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ RG + R R N +KCY CG GH +RDCRSR
Sbjct: 73 A----------------RGPNSNNRNRSSAQN--EKCYNCGKIGHLSRDCRSR 107
>gi|209734182|gb|ACI67960.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|221222340|gb|ACM09831.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
gi|303663267|gb|ADM16100.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 172
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 61/83 (73%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
++G RVRVE+SN +K R RS G
Sbjct: 74 TLSGCRVRVELSNGEK-RTRSRG 95
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V + +S++K +IE+AFS YGP++NVWVARNPPGF FVEFEDRRDAEDA RG
Sbjct: 7 WDLACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRG 66
Query: 95 FDGREINGRRVRVEM 109
DG G R+RVEM
Sbjct: 67 LDGTRCCGTRIRVEM 81
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 21 SSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 80
Query: 108 EM 109
EM
Sbjct: 81 EM 82
>gi|357623469|gb|EHJ74606.1| rbp1-like RNA-binding protein PB [Danaus plexippus]
Length = 156
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVE+ED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKVFSKYGSIRNVWVARNPPGFAFVEYEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSNPQKMRGR 118
EMSN + R R
Sbjct: 80 EMSNGRTRRDR 90
>gi|195394324|ref|XP_002055795.1| GJ10582 [Drosophila virilis]
gi|194142504|gb|EDW58907.1| GJ10582 [Drosophila virilis]
Length = 140
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 5/89 (5%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V + +S++K +IE+AF+ YGP++NVW+ARNPPGF FVEFEDRRDAEDA R
Sbjct: 7 WDLTCKVYVGNLGSSASKFEIENAFNKYGPLRNVWIARNPPGFAFVEFEDRRDAEDATRA 66
Query: 95 FDGREINGRRVRVEMSNPQKMRGRSNGRS 123
DG G R+RVEMS+ GRS R+
Sbjct: 67 LDGTRCCGTRIRVEMSS-----GRSRDRA 90
>gi|158285865|ref|XP_001687957.1| AGAP007325-PB [Anopheles gambiae str. PEST]
gi|157020194|gb|EDO64606.1| AGAP007325-PB [Anopheles gambiae str. PEST]
Length = 124
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF YGP++NVWVARNPPGF FVEFED+RDAEDAVR DG G R+RV
Sbjct: 20 SSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTRIRV 79
Query: 108 EMSN 111
EMS+
Sbjct: 80 EMSS 83
>gi|118778182|ref|XP_308500.3| AGAP007325-PA [Anopheles gambiae str. PEST]
gi|116132260|gb|EAA04307.3| AGAP007325-PA [Anopheles gambiae str. PEST]
Length = 132
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF YGP++NVWVARNPPGF FVEFED+RDAEDAVR DG G R+RV
Sbjct: 20 SSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTRIRV 79
Query: 108 EMSN 111
EMS+
Sbjct: 80 EMSS 83
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
TK +IE +F+ YGP+KN W+ARNPPGF FVEFED RDAEDAVRG DG I G RVRVEMS
Sbjct: 22 TKHEIEASFTKYGPLKNTWIARNPPGFAFVEFEDPRDAEDAVRGLDGTRICGVRVRVEMS 81
>gi|410919787|ref|XP_003973365.1| PREDICTED: uncharacterized protein LOC101077437 [Takifugu rubripes]
Length = 1490
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE
Sbjct: 23 NGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRTMCGCRVRVE 82
Query: 109 MSNPQKMRGRSNG 121
+S +K R RS G
Sbjct: 83 LSTGEK-RSRSRG 94
>gi|387916036|gb|AFK11627.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 168
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 60/92 (65%)
Query: 27 DPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRR 86
+P M L V + + K ++E AF YYGP+++VWVARNPPGF FVEFED R
Sbjct: 2 EPAMNHGSCPLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 61
Query: 87 DAEDAVRGFDGREINGRRVRVEMSNPQKMRGR 118
DA DAVR DGR + G RVRVE+SN ++ R R
Sbjct: 62 DASDAVRELDGRSLCGCRVRVELSNGERRRAR 93
>gi|157117871|ref|XP_001653077.1| RNA-binding protein [Aedes aegypti]
gi|108883341|gb|EAT47566.1| AAEL001356-PA [Aedes aegypti]
Length = 131
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF YGP++NVWVARNPPGF FVEFED+RDAEDAVR DG G R+RV
Sbjct: 20 SSASKHEIESAFGKYGPLRNVWVARNPPGFAFVEFEDKRDAEDAVRSLDGTRCCGTRIRV 79
Query: 108 EMS 110
EMS
Sbjct: 80 EMS 82
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE+AFS YGP++NVWVARNPPGF FVEF+DRRDAEDA RG DG G R+RV
Sbjct: 20 SSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFDDRRDAEDATRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF+ YGP++NVWVARNPPGF FVEFEDRRDAEDA R DG G R+RV
Sbjct: 20 SSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE FS YGP++NVWVARNPPGF FVEFED RDAEDAVRG DG + G RVRV
Sbjct: 20 SSASKHEIEGKFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGIHLCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AFS +GP++NVWVARNPPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 SSASKHEIESAFSKFGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|112983196|ref|NP_001037604.1| RNA-binding protein 1 [Bombyx mori]
gi|95115204|gb|ABF55968.1| Rbp1 [Bombyx mori]
Length = 156
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSNPQKMRGR 118
EMSN + R R
Sbjct: 80 EMSNGRTRRDR 90
>gi|50344760|ref|NP_001002053.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
gi|47940341|gb|AAH71322.1| Splicing factor, arginine/serine-rich 3a [Danio rerio]
Length = 174
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 23 NSGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRV 82
Query: 108 EMSNPQK 114
EMSN +K
Sbjct: 83 EMSNGEK 89
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF+ YGP++NVWVARNPPGF FVEFEDRRDAEDA R DG G R+RV
Sbjct: 63 SSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 122
Query: 108 EM 109
EM
Sbjct: 123 EM 124
>gi|148223201|ref|NP_001080460.1| serine/arginine-rich splicing factor 3 [Xenopus laevis]
gi|28302173|gb|AAH46661.1| Sfrs3-prov protein [Xenopus laevis]
Length = 191
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+S
Sbjct: 22 NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDLRDAADAVRELDGRTLCGCRVRVELS 81
Query: 111 NPQKMRGRSNG 121
N +K R R+ G
Sbjct: 82 NGEK-RSRNRG 91
>gi|392879762|gb|AFM88713.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRSLCGCRVRV 78
Query: 108 EMSNPQKMRGR 118
E+SN ++ R R
Sbjct: 79 ELSNGERRRAR 89
>gi|392877166|gb|AFM87415.1| Splicing factor, arginine/serine-rich 3 [Callorhinchus milii]
Length = 164
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRSLCGCRVRV 78
Query: 108 EMSNPQKMRGR 118
E+SN ++ R R
Sbjct: 79 ELSNGERRRAR 89
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S++K ++E F +GP+K+VW+ARNP GF FVE+ED RDA DAV+ D I G+R RVE
Sbjct: 42 SASKSELEKEFGRFGPLKSVWIARNPAGFAFVEYEDPRDASDAVKDMDSSTICGQRARVE 101
Query: 109 MSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+S+ R G G GS R P D KCYECG GH+ARDC
Sbjct: 102 LSSGDSRRRGFRGGG---GGGGGSFRGGRGPPRGDSKCYECGETGHFARDC 149
>gi|115447241|ref|NP_001047400.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|75324099|sp|Q6K9C3.1|RZP23_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ23; AltName:
Full=RS-containing zinc finger protein 23;
Short=Os-RSZ23; Short=Os-RSZp23
gi|47497180|dbj|BAD19227.1| putative splicing factor RSZp22 (RSZP22) [Oryza sativa Japonica
Group]
gi|113536931|dbj|BAF09314.1| Os02g0610600 [Oryza sativa Japonica Group]
gi|215704568|dbj|BAG94201.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737778|dbj|BAG96908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765616|dbj|BAG87313.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 200
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 73/127 (57%), Gaps = 23/127 (18%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + T +IED F +G +++VWVAR PPGF F++F+DRRDAEDA+R
Sbjct: 1 MARVYVGNL--DPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S + GR RSGG D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELST-KAGSGRGRDRSGGS----------------DMKCYECGEPGHF 97
Query: 156 ARDCRSR 162
AR+CR R
Sbjct: 98 ARECRLR 104
>gi|222623220|gb|EEE57352.1| hypothetical protein OsJ_07486 [Oryza sativa Japonica Group]
Length = 203
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 73/127 (57%), Gaps = 23/127 (18%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + T +IED F +G +++VWVAR PPGF F++F+DRRDAEDA+R
Sbjct: 1 MARVYVGNL--DPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S + GR RSGG D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELST-KAGSGRGRDRSGGS----------------DMKCYECGEPGHF 97
Query: 156 ARDCRSR 162
AR+CR R
Sbjct: 98 ARECRLR 104
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S++K ++E F +GP+K+VW+ARNPPGF FVEF+D RDA DAV+ D I G+R VE
Sbjct: 68 SASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDLDSSTICGQRASVE 127
Query: 109 MSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+S+ R GS R P D KCYECG GH+ARDC
Sbjct: 128 LSSGDSRRRGGFRGG-------GSFRGGRGPPRGDSKCYECGEIGHFARDC 171
>gi|209147621|gb|ACI32898.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 11/108 (10%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E +F YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQKMRGRSNG-------RSGGD-RGYRGSVRARGR 138
++G RVRVE+SN +K R R+ G R D RG RGS AR R
Sbjct: 74 TLSGSRVRVELSNGEK-RTRNRGPPPSWSRRPRDDHRGRRGSPPARRR 120
>gi|222137598|gb|ACM45326.1| rbp1-like RNA-binding protein PC [Bombyx mori]
Length = 91
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSNPQKMRGR 118
EMSN + R R
Sbjct: 80 EMSNGRTRRDR 90
>gi|221219360|gb|ACM08341.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E +F YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQK 114
++G RVRVE+SN +K
Sbjct: 74 TLSGSRVRVELSNGEK 89
>gi|209154702|gb|ACI33583.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 120
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 11/108 (10%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E +F YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQKMRGRSNG-------RSGGD-RGYRGSVRARGR 138
++G RVRVE+SN +K R R+ G R D RG RGS AR R
Sbjct: 74 TLSGSRVRVELSNGEK-RTRNRGPPPSWSRRPRDDHRGRRGSPPARRR 120
>gi|221221358|gb|ACM09340.1| Splicing factor, arginine/serine-rich 3 [Salmo salar]
Length = 170
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E +F YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNNGNKTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQK 114
++G RVRVE+SN +K
Sbjct: 74 TLSGSRVRVELSNGEK 89
>gi|218197725|gb|EEC80152.1| hypothetical protein OsI_21961 [Oryza sativa Indica Group]
Length = 264
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 93 TARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGK--NG--WRVELS 148
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R S+GR G DR Y S + KCYECG GH+AR+CR R
Sbjct: 149 -----RNASSGRGGRDR-YGSS----------ESKCYECGETGHFARECRLR 184
>gi|24645765|ref|NP_524307.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|195499861|ref|XP_002097127.1| GE26048 [Drosophila yakuba]
gi|7299363|gb|AAF54555.1| RNA-binding protein 1, isoform A [Drosophila melanogaster]
gi|194183228|gb|EDW96839.1| GE26048 [Drosophila yakuba]
gi|384217|prf||1905314A RNA-binding protein
Length = 135
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF+ YGP++NVWVARNPPGF FVEFEDRRDAEDA R DG G R+RV
Sbjct: 20 SSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|253723275|pdb|2I38|A Chain A, Solution Structure Of The Rrm Of Srp20
Length = 150
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+SN
Sbjct: 87 KTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRDLDGRTLCGCRVRVELSN 146
Query: 112 PQK 114
+K
Sbjct: 147 GEK 149
>gi|222635100|gb|EEE65232.1| hypothetical protein OsJ_20394 [Oryza sativa Japonica Group]
Length = 264
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 93 TARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGK--NG--WRVELS 148
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R S+GR G DR Y S + KCYECG GH+AR+CR R
Sbjct: 149 -----RNASSGRGGRDR-YGSS----------ESKCYECGETGHFARECRLR 184
>gi|291396115|ref|XP_002714714.1| PREDICTED: splicing factor, arginine/serine-rich 3 [Oryctolagus
cuniculus]
gi|297290700|ref|XP_001112817.2| PREDICTED: splicing factor, arginine/serine-rich 3-like [Macaca
mulatta]
gi|2125864|emb|CAA62845.1| Srp20 [Mus musculus]
gi|74139694|dbj|BAE31698.1| unnamed protein product [Mus musculus]
gi|74214717|dbj|BAE31197.1| unnamed protein product [Mus musculus]
gi|74220550|dbj|BAE31490.1| unnamed protein product [Mus musculus]
gi|119624303|gb|EAX03898.1| splicing factor, arginine/serine-rich 3, isoform CRA_a [Homo
sapiens]
gi|148690656|gb|EDL22603.1| mCG21131, isoform CRA_a [Mus musculus]
gi|149043498|gb|EDL96949.1| rCG61099, isoform CRA_b [Rattus norvegicus]
gi|194385252|dbj|BAG65003.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+S
Sbjct: 22 NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELS 81
Query: 111 NPQKMRGRSNG 121
N +K R R+ G
Sbjct: 82 NGEK-RSRNRG 91
>gi|253722541|pdb|2I2Y|A Chain A, Solution Structure Of The Rrm Of Srp20 Bound To The Rna
Cauc
Length = 150
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+SN
Sbjct: 87 KTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 146
Query: 112 PQK 114
+K
Sbjct: 147 GEK 149
>gi|357150077|ref|XP_003575333.1| PREDICTED: uncharacterized protein LOC100846226 [Brachypodium
distachyon]
Length = 231
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 21/125 (16%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + +T +IED F +G +++VWVAR PPGF F++F++ RDA+DA+R
Sbjct: 1 MARVYVGNL--DPRATAREIEDEFRVFGILRSVWVARKPPGFAFIDFDESRDAKDAIREL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S +SG RG R R RP D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELST----------KSGSGRG-----RERERPGGSDMKCYECGESGHF 99
Query: 156 ARDCR 160
AR+CR
Sbjct: 100 ARECR 104
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 15/55 (27%)
Query: 181 RVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 235
RVE+S +SG RG R R RP D KCYECG GH+AR+CR
Sbjct: 65 RVELST----------KSGSGRG-----RERERPGGSDMKCYECGESGHFARECR 104
>gi|41151986|ref|NP_958480.1| splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|31418757|gb|AAH53132.1| Splicing factor, arginine/serine-rich 3b [Danio rerio]
gi|37681977|gb|AAQ97866.1| splicing factor, arginine/serine-rich 3 [Danio rerio]
Length = 163
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 18 NNGNKSELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRV 77
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R RS G
Sbjct: 78 ELSNGEK-RTRSRG 90
>gi|432856730|ref|XP_004068509.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 1
[Oryzias latipes]
Length = 166
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 18 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRV 77
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R RS G
Sbjct: 78 ELSNGEK-RSRSRG 90
>gi|340711199|ref|XP_003394166.1| PREDICTED: RNA-binding protein 1-like [Bombus terrestris]
Length = 161
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 49/62 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVAR PPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 NSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|432857012|ref|XP_004068510.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Oryzias latipes]
Length = 182
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 18 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRV 77
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R RS G
Sbjct: 78 ELSNGEK-RSRSRG 90
>gi|291230091|ref|XP_002735001.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 227
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 18/110 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ +IE AF+ YG + VWVARNPP F FV F+ DAE+AV DGR + G RVRV ++
Sbjct: 56 SRREIEKAFAKYGKLYEVWVARNPPCFAFVVFKRSSDAEEAVHDMDGRMLCGGRVRVSLA 115
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
P R+ GR G RGY +P+ +CY+CG RGH++RDCR
Sbjct: 116 RP-----RTQGR--GRRGY-----------DPNLRCYQCGERGHFSRDCR 147
>gi|417407793|gb|JAA50492.1| Putative splicing factor arginine/serine-rich 3, partial [Desmodus
rotundus]
Length = 116
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+SN
Sbjct: 15 KTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSN 74
Query: 112 PQKMRGRSNG 121
+K R R+ G
Sbjct: 75 GEK-RSRNRG 83
>gi|350405857|ref|XP_003487573.1| PREDICTED: RNA-binding protein 1-like [Bombus impatiens]
Length = 162
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 49/62 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
S++K +IE AFS YGP++NVWVAR PPGF FVEFED RDAEDAVRG DG G RVRV
Sbjct: 20 NSASKHEIESAFSKYGPLRNVWVARKPPGFAFVEFEDPRDAEDAVRGLDGTRCCGTRVRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|222137600|gb|ACM45327.1| rbp1-like RNA-binding protein PD [Bombyx mori]
Length = 117
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|417396073|gb|JAA45070.1| Putative splicing factor arginine/serine-rich 3 isoform cra c
[Desmodus rotundus]
Length = 135
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|354484028|ref|XP_003504193.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cricetulus
griseus]
gi|344255990|gb|EGW12094.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 164
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELEHAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|389609451|dbj|BAM18337.1| RNA-binding protein 1 [Papilio xuthus]
Length = 141
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|115361548|gb|ABI95863.1| RNA-binding protein [Bombyx mori]
Length = 142
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T+++K +IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 TNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EMSN 111
EMSN
Sbjct: 80 EMSN 83
>gi|119624305|gb|EAX03900.1| splicing factor, arginine/serine-rich 3, isoform CRA_c [Homo
sapiens]
Length = 128
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|209738068|gb|ACI69903.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 158
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 21/133 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV ++ +T D+E FS YGP+++VWVAR PP FGFVE+ D RDAEDAV+G DG+
Sbjct: 18 VYVGDIV--NGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGK 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ G R+ VE++ K SN +P +C +CG RGHYA +
Sbjct: 75 VVWGSRIHVELARKAKHDHPSNHH-----------------IDPQGRCNQCGNRGHYAYN 117
Query: 159 C-RSRRSGGSGRP 170
C R R+ SG P
Sbjct: 118 CERFRQRKRSGFP 130
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 51/62 (82%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++++K +IE AFS YGP++NVWVARNPPGF FVEFED RDAED+VRG DG G R+RV
Sbjct: 20 SNASKHEIEAAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|148680433|gb|EDL12380.1| mCG2011 [Mus musculus]
Length = 156
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNDEK-RSRNRG 91
>gi|149043497|gb|EDL96948.1| rCG61099, isoform CRA_a [Rattus norvegicus]
Length = 129
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|148690657|gb|EDL22604.1| mCG21131, isoform CRA_b [Mus musculus]
Length = 129
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|47229637|emb|CAG06833.1| unnamed protein product [Tetraodon nigroviridis]
Length = 222
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K D+E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE S
Sbjct: 21 NKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRVEHS 80
Query: 111 NPQKMRGRSNG 121
+ +K R R+ G
Sbjct: 81 SGEK-RSRARG 90
>gi|355718921|gb|AES06431.1| splicing factor, arginine/serine-rich 3 [Mustela putorius furo]
Length = 150
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 56 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 115
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 116 ELSNGEK-RSRNRG 128
>gi|355561641|gb|EHH18273.1| hypothetical protein EGK_14839 [Macaca mulatta]
Length = 164
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQK 114
E+SN +K
Sbjct: 79 ELSNGEK 85
>gi|384948768|gb|AFI37989.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
Length = 164
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 30 MMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAE 89
M + L V + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA
Sbjct: 1 MHREKKKLDCKVYVGNLGNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAA 60
Query: 90 DAVRGFDGREINGRRVRVEMSNPQKMRGRSNG 121
DAVR DGR + G RVRVE+SN +K R R+ G
Sbjct: 61 DAVRELDGRTLCGCRVRVELSNGEK-RSRNRG 91
>gi|355748508|gb|EHH52991.1| hypothetical protein EGM_13542 [Macaca fascicularis]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|392333750|ref|XP_003752989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
gi|392354119|ref|XP_003751684.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Rattus
norvegicus]
Length = 147
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + K +IE AF+ +GP++NVWVARNPPGF FVEFED RDAEDA R DG + G RVRV
Sbjct: 36 SGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRV 95
Query: 108 EMSN 111
EMS+
Sbjct: 96 EMSH 99
>gi|12844972|dbj|BAB26569.1| unnamed protein product [Mus musculus]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|5441529|emb|CAB46819.1| splicing factor [Canis lupus familiaris]
Length = 133
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|30584291|gb|AAP36394.1| Homo sapiens splicing factor, arginine/serine-rich 3 [synthetic
construct]
gi|61371593|gb|AAX43696.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|61371598|gb|AAX43697.1| splicing factor arginine/serine-rich 3 [synthetic construct]
Length = 165
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Metaseiulus
occidentalis]
Length = 162
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 54/77 (70%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V I +T +++ D+E FS YG ++NVWVARNPPGF FVEFED RDAEDAVR
Sbjct: 6 WELTCKVYIGNLATHASRHDVESVFSKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRA 65
Query: 95 FDGREINGRRVRVEMSN 111
DG I G RV+ EMS+
Sbjct: 66 VDGSRICGSRVKCEMSH 82
>gi|149640565|ref|XP_001509029.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Ornithorhynchus anatinus]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RNRNRG 91
>gi|449271649|gb|EMC81933.1| Splicing factor, arginine/serine-rich 3 [Columba livia]
Length = 156
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|350596827|ref|XP_003128414.2| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
Length = 151
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|296487190|tpg|DAA29303.1| TPA: splicing factor, arginine/serine-rich 3-like [Bos taurus]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|4506901|ref|NP_003008.1| serine/arginine-rich splicing factor 3 [Homo sapiens]
gi|8567402|ref|NP_038691.1| serine/arginine-rich splicing factor 3 [Mus musculus]
gi|77736345|ref|NP_001029872.1| serine/arginine-rich splicing factor 3 [Bos taurus]
gi|114145746|ref|NP_001041372.1| splicing factor, arginine/serine-rich 3 [Rattus norvegicus]
gi|305855200|ref|NP_001182245.1| serine/arginine-rich splicing factor 3 [Ovis aries]
gi|307078119|ref|NP_001182483.1| splicing factor, arginine/serine-rich 3 [Gallus gallus]
gi|307078159|ref|NP_001182496.1| splicing factor, arginine/serine-rich 3 [Pongo abelii]
gi|350538573|ref|NP_001232578.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|114607174|ref|XP_001173216.1| PREDICTED: uncharacterized protein LOC747921 isoform 5 [Pan
troglodytes]
gi|126309787|ref|XP_001370000.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Monodelphis
domestica]
gi|149732155|ref|XP_001499880.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|296198029|ref|XP_002746526.1| PREDICTED: serine/arginine-rich splicing factor 3-like isoform 2
[Callithrix jacchus]
gi|301756971|ref|XP_002914334.1| PREDICTED: splicing factor, arginine/serine-rich 3-like [Ailuropoda
melanoleuca]
gi|326933663|ref|XP_003212920.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Meleagris
gallopavo]
gi|332255653|ref|XP_003276947.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 1
[Nomascus leucogenys]
gi|332255655|ref|XP_003276948.1| PREDICTED: serine/arginine-rich splicing factor 3 isoform 2
[Nomascus leucogenys]
gi|332823925|ref|XP_003311314.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|338717417|ref|XP_003363635.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Equus
caballus]
gi|344263812|ref|XP_003403989.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
gi|345778693|ref|XP_532124.3| PREDICTED: serine/arginine-rich splicing factor 3 [Canis lupus
familiaris]
gi|348576314|ref|XP_003473932.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cavia
porcellus]
gi|350586583|ref|XP_003482220.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Sus scrofa]
gi|395534031|ref|XP_003769052.1| PREDICTED: serine/arginine-rich splicing factor 3 [Sarcophilus
harrisii]
gi|395832270|ref|XP_003789196.1| PREDICTED: serine/arginine-rich splicing factor 3 [Otolemur
garnettii]
gi|397496243|ref|XP_003818951.1| PREDICTED: serine/arginine-rich splicing factor 3 [Pan paniscus]
gi|402866823|ref|XP_003897573.1| PREDICTED: serine/arginine-rich splicing factor 3 [Papio anubis]
gi|403261702|ref|XP_003923252.1| PREDICTED: serine/arginine-rich splicing factor 3 [Saimiri
boliviensis boliviensis]
gi|410040712|ref|XP_003950873.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410040714|ref|XP_003950874.1| PREDICTED: uncharacterized protein LOC747921 [Pan troglodytes]
gi|410959034|ref|XP_003986117.1| PREDICTED: serine/arginine-rich splicing factor 3 [Felis catus]
gi|426352928|ref|XP_004043955.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352930|ref|XP_004043956.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352932|ref|XP_004043957.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|426352934|ref|XP_004043958.1| PREDICTED: serine/arginine-rich splicing factor 3 [Gorilla gorilla
gorilla]
gi|441648624|ref|XP_004090899.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648629|ref|XP_004090900.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|441648632|ref|XP_004090901.1| PREDICTED: serine/arginine-rich splicing factor 3 [Nomascus
leucogenys]
gi|51338672|sp|P84103.1|SRSF3_HUMAN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|51338673|sp|P84104.1|SRSF3_MOUSE RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Pre-mRNA-splicing factor SRP20; AltName:
Full=Protein X16; AltName: Full=Splicing factor,
arginine/serine-rich 3
gi|122145080|sp|Q3SZR8.1|SRSF3_BOVIN RecName: Full=Serine/arginine-rich splicing factor 3; AltName:
Full=Splicing factor, arginine/serine-rich 3
gi|5531904|gb|AAD44523.1|AF107405_1 pre-mRNA splicing factor [Homo sapiens]
gi|55440|emb|CAA37821.1| X16 [Mus musculus]
gi|338484|gb|AAA36648.1| pre-mRNA splicing factor [Homo sapiens]
gi|2125863|emb|CAA62844.1| splicing factor [Mus musculus]
gi|12654193|gb|AAH00914.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|12847924|dbj|BAB27762.1| unnamed protein product [Mus musculus]
gi|26347593|dbj|BAC37445.1| unnamed protein product [Mus musculus]
gi|30582873|gb|AAP35663.1| splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|45768791|gb|AAH68111.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|46362469|gb|AAH69018.1| Splicing factor, arginine/serine-rich 3 [Homo sapiens]
gi|47940164|gb|AAH71196.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|53734444|gb|AAH83316.1| Splicing factor, arginine/serine-rich 3 (SRp20) [Mus musculus]
gi|60655009|gb|AAX32068.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|60655011|gb|AAX32069.1| splicing factor arginine/serine-rich 3 [synthetic construct]
gi|74137380|dbj|BAE22040.1| unnamed protein product [Mus musculus]
gi|74139940|dbj|BAE31808.1| unnamed protein product [Mus musculus]
gi|74179670|dbj|BAE22483.1| unnamed protein product [Mus musculus]
gi|74181349|dbj|BAE29950.1| unnamed protein product [Mus musculus]
gi|74203068|dbj|BAE26230.1| unnamed protein product [Mus musculus]
gi|74216995|dbj|BAE26606.1| unnamed protein product [Mus musculus]
gi|74222015|dbj|BAE26830.1| unnamed protein product [Mus musculus]
gi|74226734|dbj|BAE27015.1| unnamed protein product [Mus musculus]
gi|74354685|gb|AAI02736.1| Splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|90076534|dbj|BAE87947.1| unnamed protein product [Macaca fascicularis]
gi|90080349|dbj|BAE89656.1| unnamed protein product [Macaca fascicularis]
gi|109692284|gb|ABG37970.1| unknown [Rattus norvegicus]
gi|119624306|gb|EAX03901.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|119624308|gb|EAX03903.1| splicing factor, arginine/serine-rich 3, isoform CRA_d [Homo
sapiens]
gi|148690659|gb|EDL22606.1| mCG21131, isoform CRA_d [Mus musculus]
gi|149043499|gb|EDL96950.1| rCG61099, isoform CRA_c [Rattus norvegicus]
gi|165875525|gb|ABY68590.1| pre-mRNA splicing factor SRP20-like protein [Ovis aries]
gi|189069112|dbj|BAG35450.1| unnamed protein product [Homo sapiens]
gi|197127497|gb|ACH43995.1| putative splicing factor arginine/serine-rich 3 variant 2
[Taeniopygia guttata]
gi|197692159|dbj|BAG70043.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|197692405|dbj|BAG70166.1| splicing factor arginine/serine-rich 3 [Homo sapiens]
gi|261860472|dbj|BAI46758.1| splicing factor, arginine/serine-rich 3 [synthetic construct]
gi|296474519|tpg|DAA16634.1| TPA: splicing factor, arginine/serine-rich 3 [Bos taurus]
gi|349603122|gb|AEP99052.1| Splicing factor, arginine/serine-rich 3-like protein [Equus
caballus]
gi|351701484|gb|EHB04403.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
gi|380815558|gb|AFE79653.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|383420725|gb|AFH33576.1| serine/arginine-rich splicing factor 3 [Macaca mulatta]
gi|410221336|gb|JAA07887.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410221338|gb|JAA07888.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|410357561|gb|JAA44572.1| serine/arginine-rich splicing factor 3 [Pan troglodytes]
gi|417396397|gb|JAA45232.1| Putative serine/arginine-rich splicing factor 3 [Desmodus rotundus]
gi|431916817|gb|ELK16577.1| Splicing factor, arginine/serine-rich 3 [Pteropus alecto]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|281338419|gb|EFB14003.1| hypothetical protein PANDA_002213 [Ailuropoda melanoleuca]
Length = 114
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|327271253|ref|XP_003220402.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Anolis
carolinensis]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|52346014|ref|NP_001005054.1| serine/arginine-rich splicing factor 3 [Xenopus (Silurana)
tropicalis]
gi|49900231|gb|AAH76942.1| splicing factor, arginine serine-rich 3 [Xenopus (Silurana)
tropicalis]
gi|89266750|emb|CAJ83969.1| splicing factor, arginine/serine-rich 3 [Xenopus (Silurana)
tropicalis]
Length = 164
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNGEK-RSRNRG 91
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + K +IE AF+ +GP++NVWVARNPPGF FVEFED RDAEDA R DG + G RVRV
Sbjct: 16 SGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRV 75
Query: 108 EMSN 111
EMS+
Sbjct: 76 EMSH 79
>gi|148684205|gb|EDL16152.1| mCG21910 [Mus musculus]
Length = 163
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 18 NNGNKTELEWAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRV 77
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 78 ELSNGEK-RSRNRG 90
>gi|221112062|ref|XP_002166415.1| PREDICTED: uncharacterized protein LOC100209098 [Hydra
magnipapillata]
Length = 257
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 20/118 (16%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E F G +++VWVARNPPGFGF+ FED RDAEDAVR DG++I G R+RVE+
Sbjct: 13 ASRTELEREFECIGRLRDVWVARNPPGFGFIIFEDPRDAEDAVREMDGKKICGSRIRVEL 72
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR-RSGG 166
+ +GG RG + +R ++KCY CG GH ++ CRS R GG
Sbjct: 73 ARAT---------TGGSRGRQ--IR--------NEKCYNCGKTGHLSKQCRSSGRDGG 111
>gi|449672696|ref|XP_004207773.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Hydra
magnipapillata]
Length = 115
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 22/118 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E F +G +++VWVARNPPGFGF+ FED RDAEDAVR DG+ + G R+RVE
Sbjct: 13 ASRNELEKEFESFGRLRDVWVARNPPGFGFIIFEDARDAEDAVREMDGKRVCGSRIRVEF 72
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGS 167
+ RG + GR G ++KCY C GH +RDCR+ G S
Sbjct: 73 A-----RGPATGRKG-----------------REEKCYNCNKFGHMSRDCRNPGGGNS 108
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + K +IE AF+ +GP++NVWVARNPPGF FVEFED RDAEDA R DG + G RVRV
Sbjct: 16 SGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRV 75
Query: 108 EMSN 111
EMS+
Sbjct: 76 EMSH 79
>gi|410919593|ref|XP_003973268.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Takifugu
rubripes]
Length = 173
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ K D+E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 26 SNGNKTDLERAFGYYGPLRSVWVARNPPGFAFVEFEDSRDATDAVRELDGRTLCGCRVRV 85
Query: 108 EMSNPQKMRGRSNG 121
E S+ +K R R+ G
Sbjct: 86 EHSSGEK-RSRARG 98
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + K +IE AF+ +GP++NVWVARNPPGF FVEFED RDAEDA R DG + G RVRV
Sbjct: 16 SGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGSRLCGTRVRV 75
Query: 108 EMSN 111
EMS+
Sbjct: 76 EMSH 79
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 53/77 (68%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V I + +++ DIE AF YG ++NVWVARNPPGF FVEFED RDAEDAVR
Sbjct: 6 WELTCKVYIGNLANHTSRHDIESAFGKYGNLRNVWVARNPPGFAFVEFEDSRDAEDAVRA 65
Query: 95 FDGREINGRRVRVEMSN 111
DG I G RV+ EMS+
Sbjct: 66 LDGSRICGSRVKCEMSH 82
>gi|158224|gb|AAA28850.1| RNA binding protein [Drosophila melanogaster]
Length = 135
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S++K +IE AF+ YGP++NVWVARNPPGF FVEFEDRRDAEDA DG G R+RV
Sbjct: 20 SSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDGTRCCGTRIRV 79
Query: 108 EM 109
EM
Sbjct: 80 EM 81
>gi|242022186|ref|XP_002431522.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212516816|gb|EEB18784.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 150
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 20/116 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K ++ F YGP+K VWVA +PP F FV FE+R DAE+A++G D + G RVRV ++
Sbjct: 48 SKGELTRVFEKYGPLKEVWVASSPPCFAFVVFENREDAEEAIQGVDNTSVGGNRVRVSVA 107
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARG-RPFNPDDKCYECGGRGHYARDCRSRRSG 165
P+ R RG + ++P+ +CY CG RGH++RDC + G
Sbjct: 108 RPR-------------------TRGRGLKSYDPNQRCYTCGERGHFSRDCNDTKYG 144
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 188 QKMRGRSNGRSGGDRGYRGSV---RARGR---PFNPDDKCYECGGRGHYARDCRSRRSG 240
+ ++G N GG+R R SV R RGR ++P+ +CY CG RGH++RDC + G
Sbjct: 87 EAIQGVDNTSVGGNR-VRVSVARPRTRGRGLKSYDPNQRCYTCGERGHFSRDCNDTKYG 144
>gi|209737830|gb|ACI69784.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
gi|209738644|gb|ACI70191.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 20/121 (16%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV ++ +T D+E FS YGP+++VWVAR PP FGFVE+ D RDAEDAV+G DG+
Sbjct: 18 VYVGDIV--NGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGK 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ G R+ VE++ K SN +P +C +CG RGHYA +
Sbjct: 75 VVWGSRIHVELARKAKHDHPSNHH-----------------IDPQGRCNQCGNRGHYAYN 117
Query: 159 C 159
C
Sbjct: 118 C 118
>gi|115466838|ref|NP_001057018.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|75322869|sp|Q69KL9.1|RZ21A_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21A; AltName:
Full=RS-containing zinc finger protein 21A;
Short=Os-RSZ21a; Short=Os-RSZp21a
gi|51091721|dbj|BAD36521.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|55773877|dbj|BAD72462.1| putative splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113595058|dbj|BAF18932.1| Os06g0187900 [Oryza sativa Japonica Group]
gi|215686646|dbj|BAG88899.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701257|dbj|BAG92681.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 71/112 (63%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R S+GR G DR Y S + KCYECG GH+AR+CR R
Sbjct: 70 -----RNASSGRGGRDR-YGSS----------ESKCYECGETGHFARECRLR 105
>gi|156354444|ref|XP_001623404.1| predicted protein [Nematostella vectensis]
gi|156210099|gb|EDO31304.1| predicted protein [Nematostella vectensis]
Length = 82
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I +++K +IE+ F YYGP+K+VWVARNPPGF F F+DRRDAEDAVR DGR I
Sbjct: 4 VYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRYI 63
Query: 101 NGRRVRVEMSNPQKMRGRSNGR 122
G+RVRVE++ +G S GR
Sbjct: 64 CGQRVRVELA-----KGPSRGR 80
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 3/74 (4%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+++ + +IE+AFS YG ++NVWVARNPPGF FVEFED RDAEDAVR DG + G RV+V
Sbjct: 21 SNAARGEIEEAFSKYGTLRNVWVARNPPGFAFVEFEDPRDAEDAVRALDGVRLCGARVKV 80
Query: 108 EMSNPQKMRGRSNG 121
EMS ++ RSNG
Sbjct: 81 EMSTGKR---RSNG 91
>gi|209735146|gb|ACI68442.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 200
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 20/121 (16%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV ++ +T D+E FS YGP+++VWVAR PP FGFVE+ D RDAEDAV+G DG+
Sbjct: 18 VYVGDIV--NGATMCDLEREFSQYGPLRSVWVAR-PPVFGFVEYADARDAEDAVKGMDGK 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ G R+ VE++ K SN +P +C +CG RGHYA +
Sbjct: 75 VVWGSRIHVELARKAKHDHPSNHH-----------------IDPQGRCNQCGNRGHYAYN 117
Query: 159 C 159
C
Sbjct: 118 C 118
>gi|348507887|ref|XP_003441487.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oreochromis
niloticus]
Length = 165
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+S
Sbjct: 21 NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVRELDGRTLCGCRVRVELS 80
Query: 111 NPQKMRGRSNG 121
+K R R+ G
Sbjct: 81 TGEK-RSRTRG 90
>gi|432959076|ref|XP_004086176.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oryzias
latipes]
Length = 168
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP++ VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+S
Sbjct: 26 NKTELERAFGYYGPLRTVWVARNPPGFAFVEFEDPRDASDAVRELDGRTMCGCRVRVELS 85
Query: 111 NPQKMRGRSNG 121
+K R RS G
Sbjct: 86 TGEK-RSRSRG 95
>gi|226502815|ref|NP_001147002.1| LOC100280612 [Zea mays]
gi|195606380|gb|ACG25020.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195616164|gb|ACG29912.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413924261|gb|AFW64193.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413924262|gb|AFW64194.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
Length = 163
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 23/127 (18%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + +S ++ED F +G +++VWVAR PPGF F++F+DRRDAEDA+R
Sbjct: 1 MARVYVGNLDARVTSG--ELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG +V + S +NGR DR + GS + KCYECG GH+
Sbjct: 59 DGK--NGWKVELSRS--------TNGRGSRDR-HGGS----------ESKCYECGETGHF 97
Query: 156 ARDCRSR 162
AR+CR R
Sbjct: 98 ARECRLR 104
>gi|410988846|ref|XP_004000688.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Felis
catus]
Length = 164
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR +GR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELNGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|442751175|gb|JAA67747.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 164
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF F EFED RDA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFAEFEDPRDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|344244643|gb|EGW00747.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 161
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E F YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G VRV
Sbjct: 19 NNGNKTELEHDFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCPVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R++G
Sbjct: 79 ELSNGEK-RSRNHG 91
>gi|348521764|ref|XP_003448396.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Oreochromis
niloticus]
Length = 168
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRV
Sbjct: 23 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGRTMCGCRVRV 82
Query: 108 EMSNPQKMRGRSNG 121
E+S +K R RS G
Sbjct: 83 ELSTGEK-RSRSRG 95
>gi|242023192|ref|XP_002432020.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
gi|212517371|gb|EEB19282.1| transformer-2 sex-determining protein, putative [Pediculus humanus
corporis]
Length = 132
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 5/74 (6%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K ++E FS YGP++NVWVARNPPGF F+EFED RDAEDAVRG DG + G R RVEMS
Sbjct: 23 SKYELECIFSKYGPLRNVWVARNPPGFAFIEFEDPRDAEDAVRGLDGSRMCGTRARVEMS 82
Query: 111 NPQKMRGRSNGRSG 124
+ GR+ RS
Sbjct: 83 S-----GRTRHRSA 91
>gi|343960046|dbj|BAK63877.1| splicing factor, arginine/serine-rich 3 [Pan troglodytes]
Length = 124
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP+++VWVARNPPGF FVE ED RDA DAVR DGR + G RVRVE+S
Sbjct: 22 NKTELERAFGYYGPLRSVWVARNPPGFAFVESEDPRDAADAVRELDGRTLCGCRVRVELS 81
Query: 111 NPQKMRGRSNG 121
N +K R R+ G
Sbjct: 82 NGEK-RSRNRG 91
>gi|195338789|ref|XP_002036006.1| GM13734 [Drosophila sechellia]
gi|194129886|gb|EDW51929.1| GM13734 [Drosophila sechellia]
Length = 226
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K D+E F YG +++VW+ARNPPGF FVEFE RDA DAVRG DGR + GRR RVE+S
Sbjct: 21 KNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRTVCGRRARVELST 80
Query: 112 PQKMRGR 118
+ R R
Sbjct: 81 GKYARSR 87
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 50/64 (78%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ + D+E +FS YG +KNVWVARNPPGF FVE+ED RDAEDAVR DG I G RVRV
Sbjct: 20 NNTARGDLEASFSKYGALKNVWVARNPPGFAFVEYEDPRDAEDAVRAMDGSRICGSRVRV 79
Query: 108 EMSN 111
EMS+
Sbjct: 80 EMSS 83
>gi|443725386|gb|ELU13009.1| hypothetical protein CAPTEDRAFT_155905 [Capitella teleta]
Length = 204
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 21/111 (18%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K ++E F +GP+ VWVA+NPP F F+ ++ + DAEDA+R +G E++G RVR ++
Sbjct: 49 SKRELEKLFEKFGPVMEVWVAKNPPCFAFIVYKHKEDAEDAIRDMNGVEVSGHRVRCSLA 108
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRP--FNPDDKCYECGGRGHYARDC 159
P+ R R RP F+P+ +CY CG RGH++RDC
Sbjct: 109 LPRS-------------------RGRKRPSGFDPNMRCYSCGERGHFSRDC 140
>gi|28629815|gb|AAO45173.1| splicing factor arginine/serine-rich 3 [Paralichthys olivaceus]
Length = 168
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR
Sbjct: 16 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDASDAVRELDGR 73
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G ++RVE+S +K R RS G
Sbjct: 74 NMCGCKLRVELSTGEK-RSRSRG 95
>gi|407262172|ref|XP_003946018.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
gi|407264079|ref|XP_003945604.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Mus
musculus]
Length = 157
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP++NVWVARNPPGF FVEFED RD DAVR DGR + G VRV
Sbjct: 19 NNGNKTELERAFGYYGPLRNVWVARNPPGFAFVEFEDPRDDADAVRELDGRALCGCCVRV 78
Query: 108 EMSNPQKMRGRSNG 121
E+SN +K R R+ G
Sbjct: 79 ELSNDEK-RSRNRG 91
>gi|402869670|ref|XP_003898873.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Papio
anubis]
Length = 164
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + + K ++E AF YYGP+++VWVARNPPGF F+EFED DA DAVR DGR
Sbjct: 12 VYVGNL--GNNGNKTELERAFGYYGPLRSVWVARNPPGFAFIEFEDPPDAADAVRELDGR 69
Query: 99 EINGRRVRVEMSNPQKMRGRSNG 121
+ G RVRVE+SN +K R R+ G
Sbjct: 70 TLCGCRVRVELSNGEK-RSRNRG 91
>gi|443725388|gb|ELU13011.1| hypothetical protein CAPTEDRAFT_223451 [Capitella teleta]
Length = 154
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E AFSYYGP+KNVWVARNPPGF F+E+ED RDA+DAVR DG I G R RVE
Sbjct: 23 ASERELERAFSYYGPLKNVWVARNPPGFAFIEYEDPRDADDAVRSLDGSTICGVRARVEH 82
Query: 110 SN 111
S
Sbjct: 83 ST 84
>gi|296224036|ref|XP_002757876.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Callithrix
jacchus]
Length = 163
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 54/75 (72%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K ++E AF YY P+++VWVARNPPGF FVEFED RDA DAV+ DGR + RV+VE+S
Sbjct: 22 SKTELERAFGYYRPLRSVWVARNPPGFAFVEFEDSRDAADAVQELDGRTVCSCRVKVELS 81
Query: 111 NPQKMRGRSNGRSGG 125
N +K R R S G
Sbjct: 82 NGEKSRNRGPPPSWG 96
>gi|260826884|ref|XP_002608395.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
gi|229293746|gb|EEN64405.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
Length = 92
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 51/70 (72%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S TK ++E AF +GP++NVWVARNP GF FVEFED RDA DAV DGR I GRRV VE
Sbjct: 14 SGTKHELERAFGAFGPLRNVWVARNPAGFAFVEFEDPRDARDAVDALDGRYICGRRVLVE 73
Query: 109 MSNPQKMRGR 118
MS+ +K R
Sbjct: 74 MSHGKKRSSR 83
>gi|344284955|ref|XP_003414230.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Loxodonta
africana]
Length = 170
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K ++E AF YYGP+++VWVARN PGF FVEFED RDA DAVR DGR + G VRVE+S
Sbjct: 22 NKTELEQAFGYYGPLRSVWVARNAPGFAFVEFEDPRDAADAVRELDGRTLCGCCVRVELS 81
Query: 111 NPQKMRGRSNG 121
N +K R RS G
Sbjct: 82 NGEK-RSRSRG 91
>gi|157417688|gb|ABV54791.1| RNA-binding 1-like protein [Ilyanassa obsoleta]
Length = 149
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 46/61 (75%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+++E F YG +KNVWVAR P GF FVEF+D RDAEDAVR DG INGRRVRVEMS
Sbjct: 23 AKQELEXKFGKYGSLKNVWVARQPAGFAFVEFDDPRDAEDAVRALDGTRINGRRVRVEMS 82
Query: 111 N 111
Sbjct: 83 T 83
>gi|56758208|gb|AAW27244.1| SJCHGC09413 protein [Schistosoma japonicum]
Length = 214
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 67/106 (63%), Gaps = 8/106 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E F YG ++NVWVARNPPGF FVEFED DA DAVR DG + G R RVE+
Sbjct: 21 ASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDGTVMCGVRARVEL 80
Query: 110 SNPQK-----MRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECG 150
S + +RG + G D G GS R +PF+P D+CYECG
Sbjct: 81 STGKSRQKPWVRGGARNGGGRDNG-PGSRRM--KPFDPADRCYECG 123
>gi|23208529|gb|AAN15784.1| RNA binding-like protein [Galleria mellonella]
Length = 57
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 45/57 (78%)
Query: 55 IEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
IE FS YG I+NVWVARNPPGF FVEFED RDAED+VRG DG G R+RVEMSN
Sbjct: 1 IEKVFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSN 57
>gi|448878292|gb|AGE46109.1| arginine/serine-rich splicing factor RSZ19 transcript I [Sorghum
bicolor]
Length = 163
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 24/134 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + T ++ED F +G +++VWVAR PPGF F++F+DRRDAEDA+R
Sbjct: 1 MACVYVGNL--DARVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RV + ++ + G S + KCYECG GH+
Sbjct: 59 DGK--NGWRVELSRNSSGRGGRDRYGGS-------------------ESKCYECGETGHF 97
Query: 156 ARDCRSRR-SGGSG 168
AR+CR R SGG G
Sbjct: 98 ARECRLRIGSGGLG 111
>gi|315024124|gb|ADT71646.1| arginine/serine-rich 3 splicing factor [Mesocricetus auratus]
Length = 122
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Query: 58 AFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRG 117
AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DGR + G RVRVE+SN +K R
Sbjct: 2 AFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRELDGRTLCGCRVRVELSNGEK-RS 60
Query: 118 RSNG 121
R+ G
Sbjct: 61 RNRG 64
>gi|225717656|gb|ACO14674.1| RNA-binding protein 1 [Caligus clemensi]
Length = 139
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+++K +IED F YG +++VWVARNPPGF FVEFED RDAEDA +G DG I G R VE
Sbjct: 22 NASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDGSRICGVRAAVE 81
Query: 109 MSNPQK 114
MS+ +K
Sbjct: 82 MSSRKK 87
>gi|354472430|ref|XP_003498442.1| PREDICTED: serine/arginine-rich splicing factor 3-like [Cricetulus
griseus]
Length = 167
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 54/67 (80%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ K +++ AF YYGP+++VWVARNPPGF FV+FED RDA DAVR DG+ ++G RV++
Sbjct: 19 NNANKTELKWAFGYYGPLRSVWVARNPPGFVFVKFEDPRDATDAVRELDGKRLSGCRVKM 78
Query: 108 EMSNPQK 114
E+SN +K
Sbjct: 79 ELSNGEK 85
>gi|115449145|ref|NP_001048352.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|75324004|sp|Q6K4N0.1|RSZ21_ORYSJ RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=Os-RSZ21; Short=Os-RSZp21
gi|47497051|dbj|BAD19103.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|47497773|dbj|BAD19873.1| putative Splicing factor, arginine/serine-rich 7 [Oryza sativa
Japonica Group]
gi|113537883|dbj|BAF10266.1| Os02g0789400 [Oryza sativa Japonica Group]
gi|215706489|dbj|BAG93345.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215706955|dbj|BAG93415.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191722|gb|EEC74149.1| hypothetical protein OsI_09229 [Oryza sativa Indica Group]
gi|222623815|gb|EEE57947.1| hypothetical protein OsJ_08668 [Oryza sativa Japonica Group]
Length = 185
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 23/127 (18%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R
Sbjct: 1 MARLYVGNL--DPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S RG R R + KCYECG GH+
Sbjct: 59 DGK--NG--WRVELSRNSSSRG-----------------GRDRHGGSEMKCYECGETGHF 97
Query: 156 ARDCRSR 162
AR+CR R
Sbjct: 98 ARECRLR 104
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF +G I+ VWVAR PPGF F+EFED RDAEDAVR DG I G R RVE+
Sbjct: 21 ATSQELEDAFHRFGRIRKVWVARRPPGFAFIEFEDSRDAEDAVRALDGTRICGVRARVEL 80
Query: 110 SNPQKMRGRSNGRSGGDRGYRGS 132
S+ ++ G + GG RG R S
Sbjct: 81 SHGRRRNGAPD--YGGSRGGRFS 101
>gi|242066788|ref|XP_002454683.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|241934514|gb|EES07659.1| hypothetical protein SORBIDRAFT_04g035540 [Sorghum bicolor]
gi|448878294|gb|AGE46110.1| arginine/serine-rich splicing factor RSZ19 transcript II [Sorghum
bicolor]
Length = 163
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 68/119 (57%), Gaps = 22/119 (18%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+DRRDAEDA+R DG+ NG RV + +
Sbjct: 14 TSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGK--NGWRVELSRN 71
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ + G S + KCYECG GH+AR+CR R SGG G
Sbjct: 72 SSGRGGRDRYGGS-------------------ESKCYECGETGHFARECRLRIGSGGLG 111
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAFS YG I+ VWVAR PPGF FVEFED RDAED+V+ DG I G R RVE+
Sbjct: 21 ATSQEVEDAFSRYGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVEL 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|344241848|gb|EGV97951.1| Splicing factor, arginine/serine-rich 3 [Cricetulus griseus]
Length = 131
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++YV + + K ++E AF YYGP+ +VWVA+NPP F FVEFED RDA DAV+ +G
Sbjct: 11 MVYVGNI--GINGNKTELEHAFCYYGPLPSVWVAQNPPDFAFVEFEDPRDAADAVQELNG 68
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRP 139
R + G RVRVE+SN +K G + R R R P
Sbjct: 69 RTLCGCRVRVEVSNGEKRSGNRGPPTSWGRCPRDDYHRRSPP 110
>gi|212722094|ref|NP_001132794.1| uncharacterized protein LOC100194283 [Zea mays]
gi|194695412|gb|ACF81790.1| unknown [Zea mays]
gi|224035575|gb|ACN36863.1| unknown [Zea mays]
gi|413939271|gb|AFW73822.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939272|gb|AFW73823.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|413939273|gb|AFW73824.1| hypothetical protein ZEAMMB73_600026 [Zea mays]
gi|448878150|gb|AGE46038.1| arginine/serine-rich splicing factor RSZ20 transcript I [Zea mays]
gi|448878152|gb|AGE46039.1| arginine/serine-rich splicing factor RSZ20 transcript II [Zea mays]
gi|448878154|gb|AGE46040.1| arginine/serine-rich splicing factor RSZ20 transcript III [Zea
mays]
gi|448878156|gb|AGE46041.1| arginine/serine-rich splicing factor RSZ20 transcript IV [Zea mays]
Length = 173
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 22/119 (18%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VW+AR PPGF F++F+DRRDAEDA+R DG+ NG RV + +
Sbjct: 14 TSGELEDEFRVFGVLRSVWIARKPPGFAFIDFDDRRDAEDAIRDLDGK--NGWRVELSRN 71
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ + G S + KCYECG GH+AR+CR R SGG G
Sbjct: 72 SSGRGGRDRYGGS-------------------ESKCYECGETGHFARECRLRIGSGGLG 111
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 69/110 (62%), Gaps = 15/110 (13%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++E F + G ++++WVARNPPGFGF+ FED RDA+DAVR DG+ + G +VRVE
Sbjct: 13 ATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGKRVCGSKVRVE- 71
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
K RG SNG+ G G G ++KCY CG GH +R+C
Sbjct: 72 ----KARGPSNGQKGRQGGGGGR----------NEKCYNCGKVGHISREC 107
>gi|224144714|ref|XP_002325387.1| predicted protein [Populus trichocarpa]
gi|222862262|gb|EEE99768.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 16/112 (14%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F YG +++VWVAR PPG+ FVEF+DRRDA DA+R DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ K G +G G G D KCYECG GH+AR+CR R
Sbjct: 70 HNSKGGGGRSGDGHGRGG------------GEDSKCYECGEPGHFARECRLR 109
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF+ +G I+ VWVAR PPGF FVEFED RDAEDAV+ DG I G R RVE+
Sbjct: 21 ATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEI 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|168061025|ref|XP_001782492.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666045|gb|EDQ52711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 21/113 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G+ NG RV +
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ R G D KCYECG GH+AR+CR R
Sbjct: 71 SSGGGGGPRGRGGD-------------------DMKCYECGEPGHFARECRLR 104
>gi|226497532|ref|NP_001141411.1| uncharacterized protein LOC100273521 [Zea mays]
gi|194704502|gb|ACF86335.1| unknown [Zea mays]
Length = 222
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 22/110 (20%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +K+VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ D KCYECG GH+AR+CR
Sbjct: 70 TKDGGGRGRDRNGS------------------DMKCYECGEVGHFARECR 101
>gi|226532353|ref|NP_001140388.1| uncharacterized protein LOC100272442 [Zea mays]
gi|194699276|gb|ACF83722.1| unknown [Zea mays]
gi|413937728|gb|AFW72279.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286699|gb|AGC79941.1| arginine/serine-rich splicing factor RSZ28IV [Zea mays]
Length = 141
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 23/119 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ D KCYECG GH+AR+CR R SGG G
Sbjct: 70 TKVGGGRGRDRNG------------------SDMKCYECGEAGHFARECRLRIGSGGLG 110
>gi|225712646|gb|ACO12169.1| RNA-binding protein 1 [Lepeophtheirus salmonis]
Length = 142
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
Y +YV + +++K ++ED F YG +++VWVARNPPGF FVEFED RDAEDA +
Sbjct: 10 YNCKVYVGNL--GDNASKHELEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDASKA 67
Query: 95 FDGREINGRRVRVEMSNPQKMRGRSNGR 122
DG I G R VEMS+ +K R GR
Sbjct: 68 LDGSRICGVRATVEMSSRKKRNRRVGGR 95
>gi|444723316|gb|ELW63974.1| Serine/arginine-rich splicing factor 7 [Tupaia chinensis]
Length = 123
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Query: 28 PVMM--IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDR 85
PV+M RY V + T + K ++E AFSYYGP++ VW+ARNPPGF FVEFED
Sbjct: 51 PVIMSRYGRYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDP 110
Query: 86 RDAEDAVRGFDGR 98
RDAEDAVRG DG+
Sbjct: 111 RDAEDAVRGLDGK 123
>gi|195635411|gb|ACG37174.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|413922982|gb|AFW62914.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 277
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 22/110 (20%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +K+VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRTFGVLKSVWVARKPPGFAFIDFDDRRDAQDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ D KCYECG GH+AR+CR
Sbjct: 70 TKDGGGRGRDRNGS------------------DMKCYECGEVGHFARECR 101
>gi|351697385|gb|EHB00304.1| Splicing factor, arginine/serine-rich 3 [Heterocephalus glaber]
Length = 87
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 50/67 (74%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K +++ AF YYGP+++VWVARNPPGF FVEFED R + DAVR DGR G RVRV
Sbjct: 19 NNGNKTELDRAFGYYGPLRSVWVARNPPGFAFVEFEDPRASADAVRELDGRTSCGCRVRV 78
Query: 108 EMSNPQK 114
E+SN +K
Sbjct: 79 ELSNGEK 85
>gi|197725795|gb|ACH73087.1| arginine/serine-rich 7 splicing factor [Epinephelus coioides]
Length = 200
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 55/88 (62%), Gaps = 13/88 (14%)
Query: 72 RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
RNPPGF FVE+ED RDAEDAV+G DG+ + G R+RVE+S + R
Sbjct: 1 RNPPGFAFVEYEDSRDAEDAVKGMDGKVLCGSRIRVELSTGLSRKTRYG----------- 49
Query: 132 SVRARGRPFNPDDKCYECGGRGHYARDC 159
R R F+P+D+CY+CG +GHYA DC
Sbjct: 50 --RPSRRHFDPNDRCYQCGDKGHYAYDC 75
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 177 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
G R+RVE+S + R R R F+P+D+CY+CG +GHYA DC
Sbjct: 31 GSRIRVELSTGLSRKTRYG-------------RPSRRHFDPNDRCYQCGDKGHYAYDC 75
>gi|312089500|ref|XP_003146270.1| hypothetical protein LOAG_10698 [Loa loa]
Length = 111
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ E++E+AFS YG IK VW+AR PPGF FVEFED RDAEDAV+G DG I G R RV
Sbjct: 19 NDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGTRICGVRPRV 78
Query: 108 EMSN 111
E S+
Sbjct: 79 EFSH 82
>gi|356526819|ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 176
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 68/112 (60%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F YG +++VWVAR PPG+ F+EF+DRRDA DA++ DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ K GR GG+ D KCYECG GH+AR+CR R
Sbjct: 70 HNSKGGGRGGRGRGGE----------------DTKCYECGEPGHFARECRLR 105
>gi|448878397|gb|AGE46161.1| arginine/serine-rich splicing factor RSZ23 transcript I
[Physcomitrella patens subsp. patens]
Length = 210
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 21/113 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G+ NG RV +
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ R G D KCYECG GH+AR+CR R
Sbjct: 71 SSGGGGGPRGRGGD-------------------DMKCYECGEPGHFARECRLR 104
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 66/112 (58%), Gaps = 13/112 (11%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F YG +++VWVAR PPG+ FVEF+DRRDA DA+R DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ K G GS D KCYECG GH+AR+CR R
Sbjct: 70 HNSKGGGGRG---------GGSGGGGRGRGGEDMKCYECGEPGHFARECRLR 112
>gi|363807806|ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
gi|255640857|gb|ACU20711.1| unknown [Glycine max]
Length = 177
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 70/121 (57%), Gaps = 23/121 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+ D+ED F YG + +VWVAR PPG+ F+EF+DRRDA DA++ DG+ NG RVE+S
Sbjct: 14 NERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR---RSGGS 167
+ K GR GG+ D KCYECG GH+AR+CR R R GS
Sbjct: 70 HNSKGGGRGGRGRGGE----------------DTKCYECGEPGHFARECRLRIGSRGLGS 113
Query: 168 G 168
G
Sbjct: 114 G 114
>gi|339521945|gb|AEJ84137.1| splicing factor [Capra hircus]
Length = 124
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ K ++E AF YYGP+++VWVARNPPGF FVEFED RDA DAVR DG+ + G R RV
Sbjct: 19 NNGNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAGDAVRELDGKTLCGCRERV 78
Query: 108 EMSNPQKMRGRSNG 121
++ N +K R R+ G
Sbjct: 79 KLLNGEK-RSRNRG 91
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+++K +IED F YG +++VWVARNPPGF FVEFED RDAEDA +G DG I G R VE
Sbjct: 20 NASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDGSRICGVRATVE 79
Query: 109 MS 110
MS
Sbjct: 80 MS 81
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+++K +IED F YG +++VWVARNPPGF FVEFED RDAEDA +G DG I G R VE
Sbjct: 20 NASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAEDAAKGLDGSRICGVRATVE 79
Query: 109 MS 110
MS
Sbjct: 80 MS 81
>gi|225424701|ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
gi|296086540|emb|CBI32129.3| unnamed protein product [Vitis vinifera]
Length = 182
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 74/121 (61%), Gaps = 15/121 (12%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ ++ED F YG I++VWVAR PPG+ FVEF DRRDA DA+RG DG+ RVE+S
Sbjct: 14 SERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDGKSG----WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR---RSGGS 167
+ N + GG G G R RGR D KCYECG GH+AR+CR R R GS
Sbjct: 70 H--------NSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFARECRLRIGSRGMGS 121
Query: 168 G 168
G
Sbjct: 122 G 122
>gi|168048201|ref|XP_001776556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672147|gb|EDQ58689.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 21/113 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G+ NG RV +
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ R G D KCYECG GH+AR+CR R
Sbjct: 71 SSGGGGGPRGRGGD-------------------DMKCYECGEPGHFARECRLR 104
>gi|402591118|gb|EJW85048.1| hypothetical protein WUBG_04041 [Wuchereria bancrofti]
Length = 141
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ E++E+AFS YG IK VW+AR PPGF F+EFED RDAEDAV+G DG I G R RV
Sbjct: 19 NDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTRICGVRPRV 78
Query: 108 EMSN 111
E S+
Sbjct: 79 EFSH 82
>gi|219887691|gb|ACL54220.1| unknown [Zea mays]
gi|413937734|gb|AFW72285.1| hypothetical protein ZEAMMB73_339392 [Zea mays]
gi|443286701|gb|AGC79942.1| arginine/serine-rich splicing factor RSZ28V [Zea mays]
Length = 231
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 23/119 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ D KCYECG GH+AR+CR R SGG G
Sbjct: 70 TKVGGGRGRDRNGS------------------DMKCYECGEAGHFARECRLRIGSGGLG 110
>gi|448878401|gb|AGE46163.1| arginine/serine-rich splicing factor RSZ23 transcript III
[Physcomitrella patens subsp. patens]
Length = 209
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 21/113 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G+ NG RV +
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ R G D KCYECG GH+AR+CR R
Sbjct: 71 SSGGGGGPRGRGGD-------------------DMKCYECGEPGHFARECRLR 104
>gi|195649571|gb|ACG44253.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 255
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 23/119 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ D KCYECG GH+AR+CR R SGG G
Sbjct: 70 TKVGGGRGRDRNGS------------------DMKCYECGEAGHFARECRLRIGSGGLG 110
>gi|194688308|gb|ACF78238.1| unknown [Zea mays]
gi|194701410|gb|ACF84789.1| unknown [Zea mays]
gi|219886269|gb|ACL53509.1| unknown [Zea mays]
gi|223943153|gb|ACN25660.1| unknown [Zea mays]
gi|224028603|gb|ACN33377.1| unknown [Zea mays]
gi|238011236|gb|ACR36653.1| unknown [Zea mays]
gi|413937729|gb|AFW72280.1| splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413937730|gb|AFW72281.1| splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413937731|gb|AFW72282.1| splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413937732|gb|AFW72283.1| splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|413937733|gb|AFW72284.1| splicing factor, arginine/serine-rich 7 isoform 5 [Zea mays]
gi|443286693|gb|AGC79938.1| arginine/serine-rich splicing factor RSZ28I [Zea mays]
gi|443286695|gb|AGC79939.1| arginine/serine-rich splicing factor RSZ28II [Zea mays]
gi|443286697|gb|AGC79940.1| arginine/serine-rich splicing factor RSZ28III [Zea mays]
Length = 253
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 23/119 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ D KCYECG GH+AR+CR R SGG G
Sbjct: 70 TKVGGGRGRDRNGS------------------DMKCYECGEAGHFARECRLRIGSGGLG 110
>gi|413952875|gb|AFW85524.1| hypothetical protein ZEAMMB73_327204 [Zea mays]
Length = 138
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RVE+S
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R G R R + KCYECG GH+AR+CR R
Sbjct: 70 ----------------RNASGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF+ +G I+ VWVAR PPGF FVEFED RDAEDAV+ DG I G R RVE+
Sbjct: 21 ATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEI 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|393904920|gb|EFO17802.2| hypothetical protein LOAG_10698 [Loa loa]
Length = 133
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 48/64 (75%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ E++E+AFS YG IK VW+AR PPGF FVEFED RDAEDAV+G DG I G R RV
Sbjct: 19 NDASSEELEEAFSKYGRIKKVWLARRPPGFAFVEFEDSRDAEDAVKGLDGTRICGVRPRV 78
Query: 108 EMSN 111
E S+
Sbjct: 79 EFSH 82
>gi|443286703|gb|AGC79943.1| arginine/serine-rich splicing factor RSZ28VI [Zea mays]
Length = 185
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 23/119 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRR-SGGSG 168
+ D KCYECG GH+AR+CR R SGG G
Sbjct: 70 TKVGGGRGRDRNGS------------------DMKCYECGEAGHFARECRLRIGSGGLG 110
>gi|170596504|ref|XP_001902788.1| RNA-binding protein. [Brugia malayi]
gi|158589316|gb|EDP28363.1| RNA-binding protein., putative [Brugia malayi]
Length = 130
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 48/64 (75%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
++ E++E+AFS YG IK VW+AR PPGF F+EFED RDAEDAV+G DG I G R RV
Sbjct: 19 NDASSEELEEAFSKYGRIKKVWLARRPPGFAFIEFEDSRDAEDAVKGLDGTRICGVRPRV 78
Query: 108 EMSN 111
E S+
Sbjct: 79 EFSH 82
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T ++IEDAF+ +G I+ VWVAR PPGF FVEFED RDAED+V+ DG I G R RVE+
Sbjct: 21 ATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVEL 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|448878399|gb|AGE46162.1| arginine/serine-rich splicing factor RSZ23 transcript II
[Physcomitrella patens subsp. patens]
Length = 137
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 21/113 (18%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G+ NG RV +
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ R G D KCYECG GH+AR+CR R
Sbjct: 71 SSGGGGGPRGRGGD-------------------DMKCYECGEPGHFARECRLR 104
>gi|242092260|ref|XP_002436620.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|241914843|gb|EER87987.1| hypothetical protein SORBIDRAFT_10g005960 [Sorghum bicolor]
gi|448878284|gb|AGE46105.1| arginine/serine-rich splicing factor RSZ21 transcript I [Sorghum
bicolor]
gi|448878288|gb|AGE46107.1| arginine/serine-rich splicing factor RSZ21 transcript III [Sorghum
bicolor]
Length = 186
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 64/112 (57%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RVE+S
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R R R + KCYECG GH+AR+CR R
Sbjct: 70 ----------------RNASSGRGGRDRYGGSESKCYECGETGHFARECRLR 105
>gi|291230087|ref|XP_002734999.1| PREDICTED: RNA-binding protein, putative-like [Saccoglossus
kowalevskii]
Length = 315
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 18/110 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+K +IE +F +G I VWVARNPP F FV ++ R DAE+A+R DGR + G RVRV ++
Sbjct: 75 SKTEIERSFGRFGKITEVWVARNPPCFAFVVYKRREDAEEAMREMDGRMVCGGRVRVNIA 134
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
P+ G F+P+ +CY+CG RGH++RDCR
Sbjct: 135 RPRTRGRGRRG------------------FDPNLRCYQCGERGHFSRDCR 166
>gi|226497758|ref|NP_001149338.1| LOC100282961 [Zea mays]
gi|195607586|gb|ACG25623.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|195611760|gb|ACG27710.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223942181|gb|ACN25174.1| unknown [Zea mays]
gi|223946575|gb|ACN27371.1| unknown [Zea mays]
gi|413952876|gb|AFW85525.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413952877|gb|AFW85526.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|413952878|gb|AFW85527.1| Splicing factor, arginine/serine-rich 7 isoform 3 [Zea mays]
gi|413952879|gb|AFW85528.1| Splicing factor, arginine/serine-rich 7 isoform 4 [Zea mays]
gi|448878146|gb|AGE46036.1| arginine/serine-rich splicing factor RSZ21 transcript I [Zea mays]
gi|448878148|gb|AGE46037.1| arginine/serine-rich splicing factor RSZ21 transcript II [Zea mays]
Length = 184
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RVE+S
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R G R R + KCYECG GH+AR+CR R
Sbjct: 70 ----------------RNASGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|195626508|gb|ACG35084.1| splicing factor, arginine/serine-rich 7 [Zea mays]
Length = 184
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 20/112 (17%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RVE+S
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
R G R R + KCYECG GH+AR+CR R
Sbjct: 70 ----------------RNASGGRGGRDRHGGSESKCYECGETGHFARECRLR 105
>gi|68035449|gb|AAY84872.1| pre-mRNA processing factor [Triticum aestivum]
Length = 167
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 23/134 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T ++ED F +G +++VWVAR PPGF FV+F+DRRDA+DA++
Sbjct: 1 MARVYVGSL--DPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S R R R + KCYECG GH+
Sbjct: 59 DGK--NG--WRVELS----------------RNASSGRGGRDRSGGSEMKCYECGESGHF 98
Query: 156 ARDCRSRR-SGGSG 168
AR+CR R SGG G
Sbjct: 99 ARECRLRIGSGGLG 112
>gi|448878276|gb|AGE46101.1| arginine/serine-rich splicing factor RSZ28 transcript I [Sorghum
bicolor]
gi|448878278|gb|AGE46102.1| arginine/serine-rich splicing factor RSZ28 transcript II [Sorghum
bicolor]
gi|448878280|gb|AGE46103.1| arginine/serine-rich splicing factor RSZ28 transcript III [Sorghum
bicolor]
gi|448878282|gb|AGE46104.1| arginine/serine-rich splicing factor RSZ28 transcript IV [Sorghum
bicolor]
Length = 246
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 22/112 (19%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG+ NG +VE+S
Sbjct: 14 TAREIEDEFRTFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDGK--NG--WKVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ D KCYECG GH+AR+CR R
Sbjct: 70 T------------------KAGGGRGRDRNGSDMKCYECGESGHFARECRLR 103
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T ++IEDAF+ +G I+ VWVAR PPGF FVEFED RDAED+V+ DG I G R RVE+
Sbjct: 21 ATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGTRICGVRARVEL 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF+ +G I+ VWVAR PPGF FVEFED RDAEDAV+ DG I G R RVE+
Sbjct: 30 ATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEI 89
Query: 110 SN 111
S+
Sbjct: 90 SH 91
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF+ +G I+ VWVAR PPGF FVEFED RDAEDAV+ DG I G R RVE+
Sbjct: 21 ATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEI 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++EDAF+ +G I+ VWVAR PPGF FVEFED RDAEDAV+ DG I G R RVE+
Sbjct: 21 ATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTRICGVRARVEI 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|326496394|dbj|BAJ94659.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517812|dbj|BAK03824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 182
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 23/134 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T ++ED F +G +++VWVAR PPGF FV+F+DRRDA+DA++
Sbjct: 1 MARVYVGSL--DPAVTARELEDEFRVFGVLRSVWVARKPPGFAFVDFDDRRDAQDAIKDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S R R R + KCYECG GH+
Sbjct: 59 DGK--NG--WRVELS----------------RNASSGRGGRDRSGGSEMKCYECGESGHF 98
Query: 156 ARDCRSRR-SGGSG 168
AR+CR R SGG G
Sbjct: 99 ARECRLRIGSGGLG 112
>gi|357137369|ref|XP_003570273.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 189
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 13/116 (11%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RV +
Sbjct: 14 TAGELEDEFRVFGALRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK--NGWRVEL--- 68
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
S SG G G R R + KCYECG GH+AR+CR R G
Sbjct: 69 --------SRNSSGRGGGRDGGGGGRDRHGGSESKCYECGESGHFARECRLRIGAG 116
>gi|346472149|gb|AEO35919.1| hypothetical protein [Amblyomma maculatum]
Length = 165
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 69/124 (55%), Gaps = 22/124 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
ML I+ + L + D+ED F YG +++VWVAR PPG+ FVEF+DRRDA DA+R
Sbjct: 1 MLGIWTHVSL------ERDLEDEFRVYGVLRSVWVARRPPGYAFVEFDDRRDALDAIRAL 54
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVEMS+ K G G RG D KCY CG GH+
Sbjct: 55 DGK--NG--WRVEMSHQSKDGSGGRGGGGRSRG------------GEDMKCYGCGEPGHF 98
Query: 156 ARDC 159
AR+C
Sbjct: 99 AREC 102
>gi|357124980|ref|XP_003564174.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Brachypodium distachyon]
Length = 185
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 22/127 (17%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T ++ED F +G +++VWVAR PPGF F++F+DRRDA+DA+R
Sbjct: 1 MARVYVGNL--DPAVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDI 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S R R R + KCYECG GH+
Sbjct: 59 DGK--NG--WRVELS----------------RNASSGRGGRDRSGGSEMKCYECGESGHF 98
Query: 156 ARDCRSR 162
AR+CR R
Sbjct: 99 ARECRLR 105
>gi|313242504|emb|CBY34644.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
L S + ++E YYG + +VW+AR PPGFG+VEFED RDA+DA+R DGR + GRR
Sbjct: 17 LGSHPPSTAEVEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDLDGRTVFGRR 76
Query: 105 VRVEMSN 111
++VE+S+
Sbjct: 77 LKVELSH 83
>gi|313226285|emb|CBY21429.1| unnamed protein product [Oikopleura dioica]
Length = 197
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 49/67 (73%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
L S + ++E YYG + +VW+AR PPGFG+VEFED RDA+DA+R DGR + GRR
Sbjct: 17 LGSHPPSTAEVEKEMGYYGKLVSVWIARRPPGFGYVEFEDPRDAKDAIRDLDGRTVFGRR 76
Query: 105 VRVEMSN 111
++VE+S+
Sbjct: 77 LKVELSH 83
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+T +I+D F+ YG + N+WVARNPPGF FV+FED RDA+DA+R DGR+ G R+RVE
Sbjct: 13 DATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDGRDFLGGRIRVE 72
Query: 109 MS 110
++
Sbjct: 73 LA 74
>gi|326491985|dbj|BAJ98217.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 194
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RV + +
Sbjct: 14 TAGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK--NGWRVELSRN 71
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
+ GR G D KCYECG GH+AR+CR R G
Sbjct: 72 DRGDRGGRGGGGG--------GGGGGRDRGGSDMKCYECGESGHFARECRLRIGAG 119
>gi|68035360|gb|AAY84871.1| pre-mRNA processing factor [Triticum aestivum]
Length = 194
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RV + +
Sbjct: 14 TAGELEDEFRVFGILRSVWVARKPPGFAFIDFDDKRDAEDALRDLDGK--NGWRVELSRN 71
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
+ GR G D KCYECG GH+AR+CR R G
Sbjct: 72 DRGDRGGRGGGGG--------GGGGGRGRGGSDMKCYECGESGHFARECRLRIGAG 119
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++E+AF YGPI+ VW+AR PPGF F+EFED RDA+DAV+ +G I G R RVE+
Sbjct: 26 ATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGARICGVRPRVEI 85
Query: 110 SN 111
S+
Sbjct: 86 SH 87
>gi|356552596|ref|XP_003544651.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
max]
Length = 178
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 71/124 (57%), Gaps = 21/124 (16%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T+ D+ED F +G I++VWVAR PPG+ F++F+DRRDA+DA+R
Sbjct: 1 MSRVYVGNL--DSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S+ + G G G D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELSHNSRGGGGGRGGRSG---------------GSDLKCYECGEPGHF 99
Query: 156 ARDC 159
AR+C
Sbjct: 100 AREC 103
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I + + K +IE F+ YGP+K+VW+ARNPPGF FV F+D DA+DAV DGR +
Sbjct: 7 VYIGNLGSGAAKHEIEKEFARYGPLKDVWIARNPPGFAFVVFDDPLDAQDAVEALDGRRL 66
Query: 101 NGRRVRVEMS 110
G RVRVE++
Sbjct: 67 CGARVRVEIA 76
>gi|413924263|gb|AFW64195.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 178
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 77/135 (57%), Gaps = 25/135 (18%)
Query: 29 VMMIARYM-LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRD 87
++ +AR+ + Y+S+ L S S E + + + +VWVAR PPGF F++F+DRRD
Sbjct: 9 MLDLARWRGFICYISLRLLSLSD--EHLVQSTNCCSQC-SVWVARKPPGFAFIDFDDRRD 65
Query: 88 AEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCY 147
AEDA+R DG+ NG +V + S +NGR DR + GS + KCY
Sbjct: 66 AEDAIRDLDGK--NGWKVELSRS--------TNGRGSRDR-HGGS----------ESKCY 104
Query: 148 ECGGRGHYARDCRSR 162
ECG GH+AR+CR R
Sbjct: 105 ECGETGHFARECRLR 119
>gi|405965541|gb|EKC30907.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 280
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 18/119 (15%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + +K D+E AF +GP+ VWVARNPP F F+ ++ R DAE A+R DG+ +
Sbjct: 36 VHVADLGIDPSKRDLERAFEKFGPLIEVWVARNPPCFAFIVYKYREDAEKALREMDGKPL 95
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+G R+R ++ P+ R G F+P+ +CY CG +GH++RDC
Sbjct: 96 SGGRIRCSLARPRTRGRRRRG------------------FDPNLRCYTCGEKGHFSRDC 136
>gi|413924259|gb|AFW64191.1| hypothetical protein ZEAMMB73_035767, partial [Zea mays]
Length = 191
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 21/97 (21%)
Query: 66 KNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGG 125
++VWVAR PPGF F++F+DRRDAEDA+R DG+ NG +V + S +NGR
Sbjct: 57 RSVWVARKPPGFAFIDFDDRRDAEDAIRDLDGK--NGWKVELSRS--------TNGRGSR 106
Query: 126 DRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
DR + GS + KCYECG GH+AR+CR R
Sbjct: 107 DR-HGGS----------ESKCYECGETGHFARECRLR 132
>gi|359807263|ref|NP_001241113.1| uncharacterized protein LOC100790689 [Glycine max]
gi|255625755|gb|ACU13222.1| unknown [Glycine max]
gi|255635722|gb|ACU18210.1| unknown [Glycine max]
Length = 178
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 21/124 (16%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T+ D+ED F +G I++VWVAR PPG+ F++F+DRRDA+DA+R
Sbjct: 1 MSRVYVGNL--DSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIREL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RV + ++ GR G D KCYECG GH+
Sbjct: 59 DGK--NGWRVELSHNSRGGGGGRGGRSGGSDL-----------------KCYECGEPGHF 99
Query: 156 ARDC 159
AR+C
Sbjct: 100 AREC 103
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 188
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 10/109 (9%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ D+ED F +G +++VWVAR PPG+ F+EF+DRRDA DA++ DG+ NG RVE+S
Sbjct: 14 TERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G GR G G G D KCYECG GH+AR+C
Sbjct: 70 HNSKGGGGGGGRRGRGGGGGGGGGG------DDLKCYECGEPGHFAREC 112
>gi|391339219|ref|XP_003743949.1| PREDICTED: RNA-binding protein 1-like [Metaseiulus occidentalis]
Length = 78
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 44/63 (69%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V I + +++ DIE AF YG ++NVWVARNPPGF FVEFED RDAEDAVR
Sbjct: 6 WELTCKVYIGNLANHTSRHDIEAAFGKYGSLRNVWVARNPPGFAFVEFEDSRDAEDAVRA 65
Query: 95 FDG 97
DG
Sbjct: 66 LDG 68
>gi|357466537|ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
gi|355492601|gb|AES73804.1| Splicing factor arginine/serine-rich [Medicago truncatula]
Length = 199
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F +G I++VWVAR PPG+ F++F+DRRDA DA+R DG+ NG RVE+S
Sbjct: 14 SERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G GR G G G R R D KCYECG GH+AR+C
Sbjct: 70 HNSKTGGGGGGRGG---GGGGGGRGRSGGGGSDLKCYECGEPGHFAREC 115
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSNPQ 113
E+S Q
Sbjct: 72 ELSTGQ 77
>gi|357436747|ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula]
Length = 190
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 12/126 (9%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + ++ D+ED F +G I++VWVAR PPG+ F++F+DRRDA+DA+R
Sbjct: 1 MSRVYVGNL--DSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRDL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S+ + G G G G R G D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELSHNSRSGGGGGGGGG------GRGRGGGGGGGSDLKCYECGEPGHF 108
Query: 156 ARDCRS 161
AR+CR+
Sbjct: 109 ARECRN 114
>gi|359476412|ref|XP_002272657.2| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Vitis vinifera]
gi|296083786|emb|CBI24003.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 15/110 (13%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G I++VWVAR PPG+ F++F+DRRDA+DA+R DG+ NG RVE+S
Sbjct: 14 TERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAIRELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ + G RGR D KCYECG GH+AR+CR
Sbjct: 70 HNSRGGGGGG-----------RGGGRGRSGGSDLKCYECGEPGHFARECR 108
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T +++E+AF YGPI+ VW+AR PPGF F+EFED RDA+DAV+ +G I G R RVE+
Sbjct: 21 ATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDAVKALNGARICGVRPRVEI 80
Query: 110 SN 111
S+
Sbjct: 81 SH 82
>gi|391348700|ref|XP_003748582.1| PREDICTED: uncharacterized protein LOC100904155 [Metaseiulus
occidentalis]
Length = 531
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S S KED+E FS YG + NVWVA+NPPGF FV+F+D ++A DAV DG+E+NG +
Sbjct: 53 ISESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQELNGMTL 112
Query: 106 RV 107
+V
Sbjct: 113 KV 114
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 71/112 (63%), Gaps = 12/112 (10%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F +G I++VWVAR PPG+ F++F+D+RDA+DA+ DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ N R GG G G RGR D KCYECG GH+AR+CR R
Sbjct: 70 H--------NSRGGGGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRLR 113
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 20/109 (18%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F YG +++VWVAR PPGF F+EFEDRRDA DAVR +G+ RVE+S
Sbjct: 14 TERELEDEFRVYGVLRSVWVARKPPGFAFIEFEDRRDAGDAVRALNGKN----DWRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
GR GGD D CY+CG GH+AR+C
Sbjct: 70 RNSGGGGRGGRGRGGD----------------DMSCYKCGESGHFAREC 102
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSNPQ 113
E+S Q
Sbjct: 72 ELSTGQ 77
>gi|388505416|gb|AFK40774.1| unknown [Lotus japonicus]
Length = 181
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 17/109 (15%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F YG +++VWVAR PPG+ F+EF+D+RDA DA+ DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G G D KCYECG GH+AR+C
Sbjct: 70 HNSKGGGGGRGGGRGRG-------------GEDLKCYECGEPGHFAREC 105
>gi|413924264|gb|AFW64196.1| hypothetical protein ZEAMMB73_035767 [Zea mays]
Length = 136
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 21/98 (21%)
Query: 65 IKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSG 124
+++VWVAR PPGF F++F+DRRDAEDA+R DG+ NG +V + S +NGR
Sbjct: 1 MESVWVARKPPGFAFIDFDDRRDAEDAIRDLDGK--NGWKVELSRS--------TNGRGS 50
Query: 125 GDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
DR + GS + KCYECG GH+AR+CR R
Sbjct: 51 RDR-HGGS----------ESKCYECGETGHFARECRLR 77
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSNPQ 113
E+S Q
Sbjct: 72 ELSTGQ 77
>gi|260819022|ref|XP_002604681.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
gi|229290009|gb|EEN60692.1| hypothetical protein BRAFLDRAFT_282357 [Branchiostoma floridae]
Length = 148
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ K +IE+ FS +G ++NVWVARNPPGF +VEFED RDA DAV+ +G+ I G R RVE
Sbjct: 23 AAKHEIEERFSDFGRLRNVWVARNPPGFAYVEFEDHRDARDAVKSLNGKMICGVRSRVEF 82
Query: 110 SN 111
S+
Sbjct: 83 SH 84
>gi|297802872|ref|XP_002869320.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
gi|297315156|gb|EFH45579.1| hypothetical protein ARALYDRAFT_491582 [Arabidopsis lyrata subsp.
lyrata]
Length = 197
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 13/118 (11%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G I++VWVAR PPG+ F++FED RDA DA+R DG+ NG RVE S
Sbjct: 14 TERELEDEFRTFGVIRSVWVARRPPGYAFLDFEDPRDARDAIRDVDGK--NG--WRVEQS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
+ + RG G G + D KCYECG GH+AR+CR+R GG+G
Sbjct: 70 HNRGERGGGGRGGDRGGGGGGRGAS-------DLKCYECGETGHFARECRNR--GGTG 118
>gi|339243139|ref|XP_003377495.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
gi|316973698|gb|EFV57260.1| splicing factor, arginine/serine-rich 3 [Trichinella spiralis]
Length = 163
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++ ++E+ F +GP++NVWVAR P GF FVEFED RDA DAVR DG + G R RVE+
Sbjct: 47 ASRGELEEIFGRFGPLRNVWVARRPWGFAFVEFEDARDAIDAVRQLDGSRMCGVRARVEL 106
Query: 110 SNPQKM----RGRSNGRSGGD 126
S+ Q+ RG + R GGD
Sbjct: 107 SHGQRRNRGPRGYDDERRGGD 127
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 43/61 (70%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K D+E F YGPI +VWVARNPPGF FV + R DA+ AVR DGR + GRRVRVE +
Sbjct: 25 KNDLEREFDRYGPITDVWVARNPPGFAFVVYMYREDADKAVRSLDGRLMCGRRVRVEHAR 84
Query: 112 P 112
P
Sbjct: 85 P 85
>gi|313216549|emb|CBY37839.1| unnamed protein product [Oikopleura dioica]
gi|313217070|emb|CBY38254.1| unnamed protein product [Oikopleura dioica]
Length = 157
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E AFS YG + +VWVAR P GF FVE ++ +AEDAV+ DGREI G+RVRVEM
Sbjct: 22 KAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGREICGQRVRVEMRK 81
Query: 112 PQKMRGRSNGRSGGDR 127
+ G ++ R G R
Sbjct: 82 SHRRVGNADDRGGRSR 97
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSN 111
E+S
Sbjct: 72 ELST 75
>gi|313233267|emb|CBY24382.1| unnamed protein product [Oikopleura dioica]
Length = 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E AFS YG + +VWVAR P GF FVE ++ +AEDAV+ DGREI G+RVRVEM
Sbjct: 32 KAELERAFSKYGEVISVWVARRPTGFAFVEMKEEDEAEDAVKSLDGREICGQRVRVEMRK 91
Query: 112 PQKMRGRSNGRSGGDR 127
+ G ++ R G R
Sbjct: 92 SHRRVGNADDRGGRSR 107
>gi|391347503|ref|XP_003748000.1| PREDICTED: uncharacterized protein LOC100899663, partial
[Metaseiulus occidentalis]
Length = 166
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ S KED+E FS YG + NVWVA+NPPGF FV+F+D ++A DAV DG+E+NG +
Sbjct: 44 INESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQELNGMTL 103
Query: 106 RV 107
+V
Sbjct: 104 KV 105
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSNPQ 113
E+S Q
Sbjct: 72 ELSTGQ 77
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R RV
Sbjct: 12 SDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
Query: 108 EMSN 111
E+S
Sbjct: 72 ELST 75
>gi|197210363|gb|ACH48189.1| alternative splicing factor SRp20/9G8 [Haplopelma schmidti]
Length = 139
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ S KED+E FS +G + +VWVARNPPGF F+EF+D DA +A+R +G ING +
Sbjct: 11 LNDSIDKEDLEREFSKFGKLNHVWVARNPPGFAFIEFDDDEDANEAIREMNGATINGSEI 70
Query: 106 RVEMS 110
RV+MS
Sbjct: 71 RVDMS 75
>gi|297739973|emb|CBI30155.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGR 103
++++ +EDAFS YG I V P GFGF+ F D R EDA+R GRE++GR
Sbjct: 17 NTSERHLEDAFSRYGKILESLVMMERDTGRPRGFGFITFADHRAMEDAIREMHGRELDGR 76
Query: 104 RVRVEMSNPQKMRGRSNGRSGGDR----GYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ V + P KM +G G R G R S R +P D C++CG GH+ARDC
Sbjct: 77 VISVNKAQP-KMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGHWARDC 135
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 174 KINGRRVRVEMSNPQKMRGRSNGRSGGDR----GYRGSVRARGRPFNPDDKCYECGGRGH 229
+++GR + V + P KM +G G R G R S R +P D C++CG GH
Sbjct: 72 ELDGRVISVNKAQP-KMGSEDSGYGYGGRDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGH 130
Query: 230 YARDC 234
+ARDC
Sbjct: 131 WARDC 135
>gi|297850860|ref|XP_002893311.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
gi|297339153|gb|EFH69570.1| hypothetical protein ARALYDRAFT_472646 [Arabidopsis lyrata subsp.
lyrata]
Length = 162
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+R D + NG RVE+S
Sbjct: 14 TERELEDEFRIFGVLRNVWVARRPPGYAFLEFDDERDALDAIRALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|443698345|gb|ELT98383.1| hypothetical protein CAPTEDRAFT_123867, partial [Capitella teleta]
Length = 88
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 47/76 (61%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S TK+D+E F YG IK VWVARNPPGF F+EF +D AVR +G+ + G R+RVE
Sbjct: 10 SVTKDDLEKEFRQYGRIKEVWVARNPPGFAFIEFAHEKDIRSAVRSMNGKFVMGSRIRVE 69
Query: 109 MSNPQKMRGRSNGRSG 124
+ R + N R+
Sbjct: 70 YAKTPLSRDQRNARAA 85
>gi|156086400|ref|XP_001610609.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797862|gb|EDO07041.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 140
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I + +T ED+E FS +G I N+WVAR PPGF FV FED RDA DA+ DG E
Sbjct: 13 VYIGNLNPEATVEDVESLFSKFGTIGNIWVARRPPGFAFVTFEDPRDATDAIEELDGSEY 72
Query: 101 NGRRVRVEMS 110
G+ ++VE+S
Sbjct: 73 KGQNLKVELS 82
>gi|302845634|ref|XP_002954355.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
gi|300260285|gb|EFJ44505.1| hypothetical protein VOLCADRAFT_121301 [Volvox carteri f.
nagariensis]
Length = 287
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 58/108 (53%), Gaps = 14/108 (12%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+ D F +G ++ +WVAR PPGF F+E ED RDA DAVR DG G RVE S
Sbjct: 18 DVRDEFERFGRVRTIWVARKPPGFAFLEMEDDRDASDAVRKLDG--FQG--WRVEFSR-- 71
Query: 114 KMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
R+ RG + G P + +CYECG GH ARDCRS
Sbjct: 72 --------RADRGPPPRGGMGGMGGPMGRELRCYECGEIGHIARDCRS 111
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 46/60 (76%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K D+E+ F +G + +VWVAR PPGF FV+FED+RDAEDAV+G + R GR +RVE+S+
Sbjct: 59 KMDLENEFRQFGRLLDVWVARKPPGFAFVKFEDQRDAEDAVQGLNRRTAFGREIRVEISH 118
>gi|443714454|gb|ELU06855.1| hypothetical protein CAPTEDRAFT_164776 [Capitella teleta]
Length = 196
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E F Y+GPI +VWVARNPPGF FV ++ DA+ AV+ DGR I GRRVRVE++
Sbjct: 25 KYELEKEFEYFGPIVDVWVARNPPGFAFVVYKHSADAKKAVKELDGRMICGRRVRVELAR 84
Query: 112 P 112
P
Sbjct: 85 P 85
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding protein
srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG I G R
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRA 69
Query: 106 RVEMSN 111
RVE+S
Sbjct: 70 RVELST 75
>gi|297821775|ref|XP_002878770.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
gi|297324609|gb|EFH55029.1| hypothetical protein ARALYDRAFT_481315 [Arabidopsis lyrata subsp.
lyrata]
Length = 198
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F YG I++VWVAR PPG+ F++FED RDA DA+R DG+ NG RV
Sbjct: 14 TERELEDEFRVYGVIRSVWVARRPPGYAFLDFEDSRDARDAIRELDGK--NGWRVE---- 67
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
Q G GG G RG D KCYECG GH+AR+C
Sbjct: 68 --QSHNRGGGGGRGGGGGGRGGGDGGRGRGGSDLKCYECGESGHFAREC 114
>gi|302780048|ref|XP_002971799.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
gi|300160931|gb|EFJ27548.1| hypothetical protein SELMODRAFT_172361 [Selaginella moellendorffii]
Length = 229
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 12/113 (10%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
ST+ ++ED F +G +++VWVAR PPGF F+EF+D RDA+DA++ +G+ NG RV +
Sbjct: 13 STERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMNGK--NGWRVELSR 70
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
S+ G + + RG G + KCYECG GH+AR+C R
Sbjct: 71 SSNGGRGGGRDPGAREGRGGGGD----------ELKCYECGEAGHFARECVLR 113
>gi|332038856|gb|ACX54788.2| putative arginine/serine-rich splicing factor [Arachis diogoi]
gi|357018296|gb|AET50931.1| SR-protein [Arachis diogoi]
gi|414005520|gb|AFW97328.1| SR protein [Arachis diogoi]
Length = 181
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 70/124 (56%), Gaps = 18/124 (14%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + + T+ D+ED F +G I++VWVAR PPG+ F++F+D RDA DA+R
Sbjct: 1 MSRVYVGNL--DSRVTERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDSRDARDAIREL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
DG+ NG RVE+S+ + G G G G D KCYECG GH+
Sbjct: 59 DGK--NG--WRVELSHNSRGGGGGRGGGRGRSG------------GSDLKCYECGEPGHF 102
Query: 156 ARDC 159
AR+C
Sbjct: 103 AREC 106
>gi|391339283|ref|XP_003743981.1| PREDICTED: uncharacterized protein LOC100904514 [Metaseiulus
occidentalis]
Length = 218
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 35 YMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRG 94
+ L V I + +++ DIE AF YG ++NVWVARNPPGF FVEF+D RDAEDA R
Sbjct: 144 WDLSCKVYIGNLANHTSRHDIESAFGKYGSLRNVWVARNPPGFAFVEFDDSRDAEDACRA 203
Query: 95 FDGREI 100
DG +
Sbjct: 204 LDGSSL 209
>gi|2582643|emb|CAA05351.1| RSZp21 protein [Arabidopsis thaliana]
Length = 184
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+ D + NG RVE+S
Sbjct: 14 TERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|186478807|ref|NP_001117342.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192321|gb|AEE30442.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 164
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+ D + NG RVE+S
Sbjct: 14 TERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella moellendorffii]
Length = 181
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
M +YV + ST+ ++ED F +G +++VWVAR PPGF F+EF+D RDA+DA++
Sbjct: 1 MARVYVGNL--DPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNM 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
+G+ NG RV + S+ G + + RG G + KCYECG GH+
Sbjct: 59 NGK--NGWRVELSRSSNGGRGGGRDPGAREGRGGGGD----------ELKCYECGEAGHF 106
Query: 156 ARDC 159
AR+C
Sbjct: 107 AREC 110
>gi|18395314|ref|NP_564208.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|42571621|ref|NP_973901.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|75318747|sp|O81127.1|RZP21_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ21; AltName:
Full=RS-containing zinc finger protein 21;
Short=At-RSZ21; Short=At-RSZp21
gi|3435096|gb|AAD12770.1| SRZ21 [Arabidopsis thaliana]
gi|222424570|dbj|BAH20240.1| AT1G23860 [Arabidopsis thaliana]
gi|332192319|gb|AEE30440.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192320|gb|AEE30441.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 187
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+ D + NG RVE+S
Sbjct: 14 TERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|334182802|ref|NP_001185074.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
gi|332192322|gb|AEE30443.1| RS-containing zinc finger protein 21 [Arabidopsis thaliana]
Length = 183
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+ D + NG RVE+S
Sbjct: 14 TERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|449672680|ref|XP_004207768.1| PREDICTED: uncharacterized protein LOC100212585 isoform 2 [Hydra
magnipapillata]
Length = 179
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 5/71 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+ ++E F + G ++++WVARNPPGFGF+ FED RDA+DAVR DG+ + G +VRVE
Sbjct: 13 ATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGKRVCGSKVRVE- 71
Query: 110 SNPQKMRGRSN 120
K RG SN
Sbjct: 72 ----KARGPSN 78
>gi|71027201|ref|XP_763244.1| splicing factor [Theileria parva strain Muguga]
gi|68350197|gb|EAN30961.1| splicing factor, putative [Theileria parva]
Length = 132
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S T +D++ FS YG + NVWVARNPPGFGFV F+D RDA+DA+ +G++++G +R+E
Sbjct: 21 SVTSQDLDLLFSKYGKVTNVWVARNPPGFGFVTFDDPRDAKDALIELNGKDLHGNSLRIE 80
>gi|9369411|gb|AAF87159.1|AC002423_24 T23E23.2 [Arabidopsis thaliana]
Length = 183
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 18/109 (16%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G ++NVWVAR PPG+ F+EF+D RDA DA+ D + NG RVE+S
Sbjct: 14 TERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDRK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ K G G D KCYECG GH+AR+C
Sbjct: 70 HKDKGGRGGGGGRRGG--------------IEDSKCYECGELGHFAREC 104
>gi|241671849|ref|XP_002411428.1| RSZp21 protein, putative [Ixodes scapularis]
gi|215504077|gb|EEC13571.1| RSZp21 protein, putative [Ixodes scapularis]
Length = 222
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ED+E F YG +K VW+A+NPPGF FVEFED ++AVR +G +NG +RVE +
Sbjct: 31 TREDLEREFGKYGQLKEVWMAQNPPGFAFVEFEDNSRVDEAVREMNGTIVNGALLRVERA 90
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVR 134
K R R+ R GG +RG +R
Sbjct: 91 R-DKARTRTP-RGGGASSFRGRMR 112
>gi|147821435|emb|CAN74578.1| hypothetical protein VITISV_009111 [Vitis vinifera]
Length = 318
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 65/110 (59%), Gaps = 15/110 (13%)
Query: 62 YGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNG 121
Y + +VWVAR PPG+ FVEF DRRDA DA+RG DG+ RVE+S+ N
Sbjct: 140 YQWLASVWVARRPPGYAFVEFADRRDAVDAIRGLDGKS----GWRVELSH--------NS 187
Query: 122 RSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR---RSGGSG 168
+ GG G G R RGR D KCYECG GH+AR+CR R R GSG
Sbjct: 188 KGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFARECRLRIGSRGMGSG 237
>gi|47028307|gb|AAT09086.1| splicing factor [Bigelowiella natans]
Length = 194
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S+ K D+ED F G I W+ARNPPGFGFV FED DA+DA++ DGRE+ G+RV V+
Sbjct: 21 STDKRDLEDFFRDSGKIVATWIARNPPGFGFVTFEDPYDAKDAIKDLDGRELRGKRVSVQ 80
Query: 109 M 109
+
Sbjct: 81 L 81
>gi|156350426|ref|XP_001622278.1| predicted protein [Nematostella vectensis]
gi|156208774|gb|EDO30178.1| predicted protein [Nematostella vectensis]
Length = 116
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 45/60 (75%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+ ++ +AF YG +++VWVARNPPGF FVEF D RDA DAV DG I G+RV+VE+S+
Sbjct: 17 RHELWEAFKSYGELRDVWVARNPPGFAFVEFYDARDARDAVDALDGERICGQRVKVELSH 76
>gi|321456059|gb|EFX67176.1| hypothetical protein DAPPUDRAFT_18244 [Daphnia pulex]
Length = 79
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV +L + KED+E F YG + + WVA NPPGF F+EFED DA++AV +G
Sbjct: 2 VYVGSILENVK--KEDLEVEFGKYGKLTSAWVAFNPPGFAFIEFEDESDAQEAVASMNGT 59
Query: 99 EINGRRVRVEMSNPQKMRGR 118
+ G ++RVE+S P + RGR
Sbjct: 60 DFMGSKIRVEIS-PNRGRGR 78
>gi|15236000|ref|NP_194886.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|145334187|ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|75318746|sp|O81126.1|RZP22_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22; AltName:
Full=RS-containing zinc finger protein 22;
Short=At-RSZ22; Short=At-RSZp22
gi|3281869|emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|3435094|gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana]
gi|7270061|emb|CAB79876.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|17529204|gb|AAL38828.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21436285|gb|AAM51281.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21554419|gb|AAM63524.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|332660531|gb|AEE85931.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|332660532|gb|AEE85932.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
Length = 200
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G +++VWVAR PPG+ F++FED RDA DA+R DG+ NG RV
Sbjct: 14 TERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDGK--NGWRVE---- 67
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
Q G G G RG D KCYECG GH+AR+C
Sbjct: 68 --QSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFAREC 114
>gi|2582645|emb|CAA05352.1| RSZp22 protein [Arabidopsis thaliana]
Length = 200
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G +++VWVAR PPG+ F++FED RDA DA+R DG+ NG RV
Sbjct: 14 TERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDGK--NGWRV----- 66
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
Q G G G RG D KCYECG GH+AR+C
Sbjct: 67 -AQSHNRGERGGGGRGGDRGGGGAGRGGRGGSDLKCYECGETGHFAREC 114
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+ K ++E FS +G +++VWVAR PPGF F+EFE+ DA DAVR DGRE+ G RVRVE
Sbjct: 15 DADKRELEAEFSKFGRLQDVWVARKPPGFAFIEFENDMDARDAVRELDGRELCGNRVRVE 74
Query: 109 MS 110
++
Sbjct: 75 IA 76
>gi|318087272|gb|ADV40228.1| putative alternative splicing factor SRp20/9G8 [Latrodectus
hesperus]
Length = 165
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F YG + VWVARNPPGF F+EFED +DA +A++ +G ING +RV++S
Sbjct: 17 KEDLEREFGKYGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNGASINGSEIRVDIS 75
>gi|156350420|ref|XP_001622275.1| hypothetical protein NEMVEDRAFT_v1g141804 [Nematostella vectensis]
gi|156208771|gb|EDO30175.1| predicted protein [Nematostella vectensis]
Length = 98
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 42/58 (72%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++E AF +G + VWVARNPPGF FVE+ED RDAE+AVR DG + R +RVE SN
Sbjct: 18 ELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELDGANVCDRTIRVEFSN 75
>gi|15224171|ref|NP_180035.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75337303|sp|Q9SJA6.1|RZ22A_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22A; AltName:
Full=RS-containing zinc finger protein 22A;
Short=At-RSZ22a; Short=At-RSZp22a
gi|4572679|gb|AAD23894.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|26450830|dbj|BAC42523.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|28950713|gb|AAO63280.1| At2g24590 [Arabidopsis thaliana]
gi|330252501|gb|AEC07595.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 196
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 67/109 (61%), Gaps = 11/109 (10%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ ++ED F +G I++VWVAR PPG+ F++FED RDA DA+R DG+ NG RVE S
Sbjct: 14 TERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDGK--NG--WRVEQS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ + G G GG G RG + D KCYECG GH+AR+C
Sbjct: 70 HNRGGGGGRGGGRGGGDGGRGRGGS-------DLKCYECGESGHFAREC 111
>gi|221504228|gb|EEE29903.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
VEG]
Length = 344
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T E++E F YG I VWVARNPPGF F+ F+D RDA+DAV DG G+ +RVE+
Sbjct: 196 TTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDGYRYRGKPIRVEI 255
Query: 110 S 110
+
Sbjct: 256 A 256
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KE++E FS YG + VWVA+NPPGF FVEF+D RDA +A+R +G +NG ++RVE S
Sbjct: 89 AKEELEREFSKYGHLSQVWVAQNPPGFAFVEFDDDRDANEAIRQMNGFVLNGCKLRVEHS 148
>gi|405965540|gb|EKC30906.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 70
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
IYV + S + ++D+E AF YYG ++NVWVARNP GF FVE+ED RDA+DAVRG DG
Sbjct: 13 IYVGDL--SRDACEKDLERAFEYYGRLRNVWVARNPAGFAFVEYEDPRDADDAVRGMDG 69
>gi|158299891|ref|XP_319902.4| AGAP009142-PA [Anopheles gambiae str. PEST]
gi|157013736|gb|EAA43387.4| AGAP009142-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
KED+E F+ YG + +VWVA NPPGF F+EFE++ +AE A +G++I G ++RVE+S
Sbjct: 23 KEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAETACDNLNGQDILGSKLRVEIS- 81
Query: 112 PQKMRGRSNGRSGGDRGYR 130
+GR N R G RG+R
Sbjct: 82 ----KGRRNPR-GASRGFR 95
>gi|224143401|ref|XP_002324943.1| predicted protein [Populus trichocarpa]
gi|222866377|gb|EEF03508.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 8/112 (7%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ ++ED F +G I++VWVAR PPG+ F++F+D+RDA+DA+ D + NG RVE+S
Sbjct: 14 SERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDAGK-NG--WRVELS 70
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ + G G GG RG D KCYECG GH+AR+CR R
Sbjct: 71 HNSRGGGGGGGGGGGGRGGGRGRSG-----GSDLKCYECGEAGHFARECRLR 117
>gi|427796305|gb|JAA63604.1| Putative alternative splicing factor srp20/9g8 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 188
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F YG + VWVA+NPPGF F+EF+D RDA++A+R +G +NG R+RVE S
Sbjct: 20 AKDDLEREFGKYGRLNQVWVAQNPPGFAFLEFDDDRDADEAIRNMNGVVLNGSRLRVEYS 79
>gi|307103428|gb|EFN51688.1| hypothetical protein CHLNCDRAFT_139931 [Chlorella variabilis]
Length = 187
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 43/52 (82%), Gaps = 2/52 (3%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
D+ED F+ +G +++ WVAR PPGFGFVE+EDRRDAEDAVRG DG+ NG RV
Sbjct: 17 DVEDVFAKFGRLRSCWVARKPPGFGFVEYEDRRDAEDAVRGTDGK--NGWRV 66
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 6/89 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V + + KED+E F+ YG + +VWVA NPPGF F+EFE++ +AE A +G++I
Sbjct: 9 VYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQDI 68
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGY 129
G ++RVE+S +GR N R GG RG+
Sbjct: 69 LGSKLRVEIS-----KGRRNPR-GGPRGF 91
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
D+ D FS +G + VWVARNPPGF FV F D RDA DAVR DG+ I GR RVE+S+
Sbjct: 22 DLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDGKSIAGREWRVEVSH 79
>gi|323456543|gb|EGB12410.1| hypothetical protein AURANDRAFT_19981, partial [Aureococcus
anophagefferens]
Length = 94
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
TS+T+E + F +YG I +WVA++PPGF FV F D RDA DAV G DG EI RV V
Sbjct: 15 TSATEEALSATFQHYGTIDRLWVAKSPPGFAFVWFGDERDAADAVAGLDGTEIGPDRVTV 74
Query: 108 EMSNPQKMRGRSNGRSGG 125
++ + R +G G
Sbjct: 75 AIAKGKGDRAPRDGPGSG 92
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 5/71 (7%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
KED+E F+ YG + +VWVA NPPGF F+EFE++ +AE A +G++I G ++RVE+S
Sbjct: 20 KEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKDEAETACDNLNGQDILGSKLRVEIS- 78
Query: 112 PQKMRGRSNGR 122
+GR N R
Sbjct: 79 ----KGRRNPR 85
>gi|428672140|gb|EKX73055.1| RNA recognition motif domain containing protein [Babesia equi]
Length = 158
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+T + I+ FS +G + NVWVAR PPGF FV FED RDA DA+ +GRE G +RVE
Sbjct: 22 TTTDQIDSLFSRFGILTNVWVARRPPGFAFVTFEDPRDASDAIAELNGREFQGTTLRVE 80
>gi|401400142|ref|XP_003880722.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
gi|325115133|emb|CBZ50689.1| novel protein (Zgc:77155), related [Neospora caninum Liverpool]
Length = 206
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+T E++E F YG I VWVARNPPGF F+ F+D RDA+DAV DG G+ +
Sbjct: 37 IEADTTTEELESLFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDGYRYRGKPI 96
Query: 106 RVEMS 110
RVE++
Sbjct: 97 RVEIA 101
>gi|440803033|gb|ELR23947.1| hypothetical protein ACA1_075260 [Acanthamoeba castellanii str.
Neff]
Length = 178
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 34/130 (26%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
V+YV + S+ + + D+EDAFS YG I + + G+ F+E+ D RDA+DAVRG DG
Sbjct: 7 VVYVGRL--SSRTRERDLEDAFSKYGRIIRLDMK---AGYAFIEYNDSRDADDAVRGMDG 61
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 157
+++G R+ VE S+ R GR C+ CG GH+AR
Sbjct: 62 NDLDGARISVEPSH------RGEGR-----------------------CFSCGKEGHWAR 92
Query: 158 DCRSRRSGGS 167
DCR GGS
Sbjct: 93 DCREGPRGGS 102
>gi|242025305|ref|XP_002433066.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212518582|gb|EEB20328.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 216
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + KED+E F +G + NVWVA NPPGF F+EF ++ DAE+A +G E+ G ++
Sbjct: 25 LSQGTKKEDLESEFEKFGKLNNVWVAFNPPGFAFIEFSNKTDAENACDSMNGTELLGGKL 84
Query: 106 RVEM 109
RVE+
Sbjct: 85 RVEL 88
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F +G + ++W+ARNPPGF F+EF+ +DA+ AVR DG+ + G RVRVE+S
Sbjct: 17 KEDLEKEFGKFGRVVDIWIARNPPGFAFLEFDSPKDADVAVRSLDGKSVCGSRVRVEIS 75
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
sativus]
Length = 192
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 15/110 (13%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ ++ED F +G I++VWVAR PPG+ F++F+D RDA DA+ DG+ NG RVE+S
Sbjct: 14 SERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ + G G G R D KCYECG GH+AR+CR
Sbjct: 70 HNSRGGGGGRGGGGRGRSGGS-----------DLKCYECGEPGHFARECR 108
>gi|340368163|ref|XP_003382622.1| PREDICTED: hypothetical protein LOC100636732 [Amphimedon
queenslandica]
Length = 172
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 55 IEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+E F +G +K+VWVARNPPGF FVEFED RDAE+A+R DG+ I R++VE +
Sbjct: 19 LEREFERFGTLKSVWVARNPPGFAFVEFEDPRDAEEAIRELDGKMICNARIKVEAA 74
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I +T E++E F YG I VWVARNPPGF F+ F+D RDA+DAV DG
Sbjct: 14 VYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDGYRY 73
Query: 101 NGRRVRVEMS 110
G+ +RVE++
Sbjct: 74 RGKPIRVEIA 83
>gi|391348702|ref|XP_003748583.1| PREDICTED: uncharacterized protein LOC100904296 [Metaseiulus
occidentalis]
Length = 236
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E FS YG + +VWVA+NPPGF F+EF+D RDA +A +G +NG +RVE S
Sbjct: 86 VKEDLEREFSKYGKLNHVWVAQNPPGFAFIEFDDERDASEACNEMNGANVNGCTLRVEPS 145
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I +T E++E F YG I VWVARNPPGF F+ F+D RDA+DAV DG
Sbjct: 9 VYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAELDGYRY 68
Query: 101 NGRRVRVEMS 110
G+ +RVE++
Sbjct: 69 RGKPIRVEIA 78
>gi|112983080|ref|NP_001037670.1| repressor splicing factor 1 [Bombyx mori]
gi|95115206|gb|ABF55969.1| Rsf1 [Bombyx mori]
Length = 143
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F+ YG + +VWVA NPPGF F+EFE+ ++AEDA +G E+ G ++VE+S
Sbjct: 19 KEDLEREFAKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNGTEMLGATLKVEIS 77
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F+ YG + +VWVA NPPGF F+EFE++ +AE A +G++I G ++RVE+S
Sbjct: 20 KEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNLNGQDILGSKLRVEIS 78
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 23 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEISK 82
Query: 112 PQKMRGRSNGRSGGDRGYRG 131
+ + R G S +RG RG
Sbjct: 83 GRPRQSRRGGSS--ERGRRG 100
>gi|431913362|gb|ELK15038.1| Centrosomal protein of 192 kDa [Pteropus alecto]
Length = 2375
Score = 71.2 bits (173), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 66 KNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+ VW+ARNPPGF F EFED RD EDAVRG DG+ I G RVE+S
Sbjct: 97 ETVWIARNPPGFAFAEFEDPRDVEDAVRGLDGKVICGSWARVELS 141
>gi|399218813|emb|CCF75700.1| unnamed protein product [Babesia microti strain RI]
Length = 117
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ ++T E +E F+ +G I +WVAR PPGF FV FED RDA DAV + E G +
Sbjct: 24 LNPNTTSEQLEGIFAKFGTIATIWVARRPPGFAFVTFEDHRDAHDAVEELNRTEFQGNSL 83
Query: 106 RVEMSN-PQKMRGRSNGRSGGD 126
+VE+S P+K R+ GR D
Sbjct: 84 KVELSRGPKK---RNYGRRNSD 102
>gi|357129728|ref|XP_003566513.1| PREDICTED: uncharacterized protein LOC100839501 [Brachypodium
distachyon]
Length = 292
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ST + +D+E F YG ++NV + + +GFVEF D RDA+DA DGR
Sbjct: 41 LYVGRL--STRTRTQDVEYLFGRYGRVRNVELKHD---YGFVEFSDPRDADDARYELDGR 95
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNP-DDKCYECGGRGHYAR 157
+ +G R+ VE + G RG GS GR P +C+ CG GH+AR
Sbjct: 96 DFDGSRIIVEFA------------KGTPRGPGGSFNYVGRSLPPGSGRCFNCGIEGHWAR 143
Query: 158 DCRS 161
DC++
Sbjct: 144 DCKA 147
>gi|389608769|dbj|BAM17996.1| repressor splicing factor 1 [Papilio xuthus]
Length = 158
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F YG + +VWVA NPPGF F+EFE+ ++AEDA +G E+ G ++VE+S
Sbjct: 19 KEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNGFEMLGATLKVELS 77
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|357620751|gb|EHJ72823.1| repressor splicing factor 1 [Danaus plexippus]
Length = 151
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+E F YG + +VWVA NPPGF F+EFE+ ++AEDA +G E+ G ++VE+S
Sbjct: 19 KEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNGFEMLGATLKVELS 77
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 23 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 81
>gi|449434905|ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor RSZ21-like [Cucumis sativus]
Length = 158
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 4/64 (6%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ D+ED F +G +++VWVAR PPG+ F+EF+DRRDA DA++ DG+ NG RVE+S
Sbjct: 14 TERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGK--NG--WRVELS 69
Query: 111 NPQK 114
+ K
Sbjct: 70 HNSK 73
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 23 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 81
>gi|384248651|gb|EIE22134.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 797
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
CS ++ I F +G +++VWVAR PPGF F+E+ED RDAEDAVR DG +
Sbjct: 7 CSFTAEALLILWQFIRFGTLRSVWVARKPPGFAFIEYEDVRDAEDAVRKLDG---GPQGW 63
Query: 106 RVEMS-NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
RVE S + G G RG G G + KCYECG GH+A
Sbjct: 64 RVEFSRKDRGPGGGRGGGRDDFRGGGGGGGGGGGGMRSEMKCYECGEMGHFA 115
>gi|358253767|dbj|GAA53754.1| RNA-binding protein 1, partial [Clonorchis sinensis]
Length = 1238
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS- 110
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEREFDRFGPIADVWVARNPPGFAFIVFKYADDADRAVRRMDGSRPFGSRLRVEHAV 83
Query: 111 NPQKMRG 117
N K G
Sbjct: 84 NTSKTNG 90
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGTELLGSQLRVEIS 78
>gi|159477341|ref|XP_001696769.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158275098|gb|EDP00877.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 200
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 68/127 (53%), Gaps = 8/127 (6%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IY+ + + + D+ D F +G ++ +WVAR PPGF F+E ED RDA DAVR DG
Sbjct: 5 IYIGNLPADIA--ERDVRDEFERFGRVRTIWVARKPPGFAFMEMEDDRDAADAVRKLDG- 61
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
G RVE S ++ R GG G G G P + +CYECG GH ARD
Sbjct: 62 -FQG--WRVEFS--RRADRGPPARGGGGGGGFGGGGGPGGPGGREMRCYECGEIGHIARD 116
Query: 159 CRSRRSG 165
CR+ R G
Sbjct: 117 CRNMRGG 123
>gi|259089273|ref|NP_001158674.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
gi|225705750|gb|ACO08721.1| Splicing factor, arginine/serine-rich 3 [Oncorhynchus mykiss]
Length = 89
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 36/42 (85%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
K ++E +F YYGP+++VWVARNPPGF FVEFED RDA DAV+
Sbjct: 22 KTELERSFGYYGPLRSVWVARNPPGFAFVEFEDPRDATDAVK 63
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea mays]
Length = 314
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+EF D RDA+DA DGR
Sbjct: 13 LYVGRLAPRTRS--RDLEYLFSKYGRIREVELKRD---YAFIEFSDPRDADDAQYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 EVDGSRIIVEFA-----KGVPRG-SGGSREYMG----RGPPPG-TGRCFNCGMDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|294893816|ref|XP_002774661.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239880054|gb|EER06477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 147
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 37/47 (78%)
Query: 58 AFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
F YG I++VWVARNPPGF FV FED RDA+DA RG DG++ NGRR
Sbjct: 24 VFKRYGGIESVWVARNPPGFAFVTFEDARDADDACRGEDGKDFNGRR 70
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|448878286|gb|AGE46106.1| arginine/serine-rich splicing factor RSZ21 transcript II [Sorghum
bicolor]
Length = 79
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R DG+ NG RV +
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRDLDGK--NGWRVEL 68
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVLNGTELLGSQLRVEIS 78
>gi|440804043|gb|ELR24926.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 263
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 22/84 (26%)
Query: 76 GFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRA 135
GFGFVE+EDRRDAEDAVR DG + G+R+ VE + + R+ G R
Sbjct: 16 GFGFVEYEDRRDAEDAVRDLDGAHLMGKRIAVEWA-------KGERRATGTRS------- 61
Query: 136 RGRPFNPDDKCYECGGRGHYARDC 159
D C+ CG GH+ARDC
Sbjct: 62 --------DACFRCGEEGHWARDC 77
>gi|448878403|gb|AGE46164.1| arginine/serine-rich splicing factor RSZ23 transcript IV
[Physcomitrella patens subsp. patens]
Length = 95
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
+T+ ++ED F YG +++VWV R PPGF F+EFEDRRDA+DA+R +G
Sbjct: 13 ATERELEDEFRVYGVLRSVWVGRKPPGFAFIEFEDRRDADDAIRALNG 60
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K+D+E F+ YG + +VW+A NPPGF FVEFE R DAE A +G E+ G ++RVE+S
Sbjct: 20 KDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRVEIS 78
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ST TK+D+E F YG + ++W+ARNPPGF FVEFE AE A++ +GR
Sbjct: 10 LYVGSLNHST--TKDDVEREFGKYGHLVDIWMARNPPGFAFVEFETAGQAEAALKELNGR 67
Query: 99 EINGRRVRVEMSNPQK 114
G R+ VE S Q
Sbjct: 68 TFLGNRIMVEPSRAQN 83
>gi|384245922|gb|EIE19414.1| hypothetical protein COCSUDRAFT_58700 [Coccomyxa subellipsoidea
C-169]
Length = 163
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
IYV + ST+ + D+E+ F +G +++VWVAR PPGF FVE+ED RDA+DAVR DG
Sbjct: 5 IYVGNLPSSTA--ERDLEEEFIRFGTLRSVWVARKPPGFAFVEYEDPRDADDAVRKLDG 61
>gi|300122234|emb|CBK22807.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
KED+ AF +G + NVW+ARNPPGF FV F +AE A+R + EI RV VE+++
Sbjct: 26 KEDLRQAFEQFGTVTNVWIARNPPGFAFVTFSTPEEAEKAIREGNNMEIRDDRVSVELAH 85
Query: 112 P 112
P
Sbjct: 86 P 86
>gi|291244600|ref|XP_002742185.1| PREDICTED: alternative splicing factor SRp20/9G8, putative-like
[Saccoglossus kowalevskii]
Length = 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 23/127 (18%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNP-PGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + + D+ED F+ YG + V + FV++EDRRDAEDA++ +GRE+ G+ +
Sbjct: 15 SKQTRQRDLEDIFTAYGRLSRCDVKYGTGMAYAFVDYEDRRDAEDAIKYENGREVCGQSI 74
Query: 106 RVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSG 165
VE + + RG V+A +D+CY+C GH+ARDCR R
Sbjct: 75 VVEWARGPR---------------RGFVQA-------EDECYKCHRSGHWARDCRDPRYA 112
Query: 166 GSGRPEL 172
G GR
Sbjct: 113 GFGRTSF 119
>gi|357132692|ref|XP_003567963.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 319
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 34 RYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVR 93
RY + + S+ + D+ED F YG ++ V + F FVEF D RDA+DA
Sbjct: 9 RYGGNTRLYVGRLSSRTRSRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARY 65
Query: 94 GFDGREINGRRVRVEMSN--PQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGG 151
DGR+ +G R+ VE + P+ G + GGDR Y G RG P +C+ CG
Sbjct: 66 NLDGRDFDGSRMIVEFAKGVPRGQGGSRDRDRGGDREYMG----RGPPPG-SGRCFNCGI 120
Query: 152 RGHYARDCRS 161
GH+ARDC++
Sbjct: 121 DGHWARDCKA 130
>gi|308492842|ref|XP_003108611.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
gi|308248351|gb|EFO92303.1| hypothetical protein CRE_10821 [Caenorhabditis remanei]
Length = 155
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGRE 99
+ +T +++E+ F +G I+ VWVAR PPGF FVE++D RDAEDAVR DG E
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSE 63
>gi|226491636|ref|NP_001143694.1| uncharacterized protein LOC100276428 [Zea mays]
gi|195620112|gb|ACG31886.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878170|gb|AGE46048.1| arginine/serine-rich splicing factor RS2Z39 transcript VI [Zea
mays]
Length = 353
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YVS + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVSRLATRTRS--RDLEHLFGRYGRIREVELKRD---YAFIEFSDHRDADEARYQLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIVVEFA-----KGVPRG-SGGSREYMG----RGPPPG-TGRCFNCGVDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|413937735|gb|AFW72286.1| hypothetical protein ZEAMMB73_339392, partial [Zea mays]
Length = 119
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
T +IED F +G +++VWVAR PPGF F++F+DRRDA+DA+R DG
Sbjct: 72 TAREIEDEFRMFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRELDG 118
>gi|308459496|ref|XP_003092067.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
gi|308254399|gb|EFO98351.1| hypothetical protein CRE_24262 [Caenorhabditis remanei]
Length = 116
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+E++ D FS GPIKN+W+A+ PPGF FV F+ A DAV+ +G++I +VEM
Sbjct: 28 ATEEELHDVFSVMGPIKNIWIAKRPPGFAFVTFKRTVHAYDAVKYLNGKKICNLEAKVEM 87
Query: 110 -----SNPQKMRGRSNGRSGGDRGYRGS 132
K R N + D +G+
Sbjct: 88 CEVDFQEDLKRRTEENKKKLIDSNVQGT 115
>gi|225441175|ref|XP_002265930.1| PREDICTED: uncharacterized protein LOC100257264 [Vitis vinifera]
Length = 332
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 93/211 (44%), Gaps = 35/211 (16%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKN--VWVARN---PPGFGFVEFEDR 85
M R I+V + +TS +EDAFS YG I V + R+ P GFGF+ F D
Sbjct: 1 MGGREENRIFVGGLGWNTSERH--LEDAFSRYGKILESLVMMERDTGRPRGFGFITFADH 58
Query: 86 RDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDK 145
R EDA+R GRE++GR + V + P+ G S GR P +
Sbjct: 59 RAMEDAIREMHGRELDGRVISVNKAQPKM-------------GSEDSGYGYGRDHMPSGR 105
Query: 146 CYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDR--G 203
+ GGR H SGR +I+G R + GR + G DR G
Sbjct: 106 DHAPGGRDHAT----------SGR---DRISGGRDHMPGGRDHFPGGRDHFPGGRDRMLG 152
Query: 204 YRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
R S R +P D C++CG GH+ARDC
Sbjct: 153 GRDSYRGVDKPVGRSDDCFKCGRPGHWARDC 183
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+EF D RDA+DA DGR
Sbjct: 13 LYVGRLSPRTRS--RDLEYLFSKYGRIREVELKRD---YAFIEFSDPRDADDAQYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIIVEFA-----KGVPRG-SGGSRDYNG----RGPPPG-TGRCFNCGVDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CQA 119
>gi|147817638|emb|CAN64497.1| hypothetical protein VITISV_004037 [Vitis vinifera]
Length = 480
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 74 PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSV 133
P GFGF+ F D R EDA+R GRE++GR + V + P KM +G GY
Sbjct: 190 PRGFGFITFADHRAMEDAIREMHGRELDGRVISVNKAQP-KMGSEDSGY-----GY---- 239
Query: 134 RARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGR 193
GR P + + GGR H A R R SGG R + GR
Sbjct: 240 ---GRDHMPSGRDHAPGGRDH-ATSGRDRISGG------------RDHMPGGRDHFPGGR 283
Query: 194 SNGRSGGDR--GYRGSVRARGRPFNPDDKCYECGGRGHYARDC 234
+ G DR G R S R +P D C++CG GH+ARDC
Sbjct: 284 DHFPGGRDRMLGGRDSYRGVDKPVGRSDDCFKCGRPGHWARDC 326
>gi|56757157|gb|AAW26750.1| unknown [Schistosoma japonicum]
Length = 131
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 42/70 (60%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHAV 83
Query: 112 PQKMRGRSNG 121
K R G
Sbjct: 84 NNKTANRLPG 93
>gi|72012937|ref|XP_780865.1| PREDICTED: uncharacterized protein LOC575368 [Strongylocentrotus
purpuratus]
Length = 200
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 25/124 (20%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNP-PGFGFVEFEDRRDAEDAVRGF 95
+ + I S ++ + D+ED F YYG + + + FV++ D+RDAEDA++
Sbjct: 1 MTAQLFIGRLSKNTRQRDVEDMFDYYGKMSRCELKFGSGMAYAFVDYVDKRDAEDAIKHE 60
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
+G+E+NG+ + VE + G RG+ DD+CY CG RGH+
Sbjct: 61 NGKELNGQSIVVEWAR------------GPKRGFE------------DDECYRCGRRGHF 96
Query: 156 ARDC 159
ARDC
Sbjct: 97 ARDC 100
>gi|218192579|gb|EEC75006.1| hypothetical protein OsI_11073 [Oryza sativa Indica Group]
Length = 294
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVGRLSSRTRS--RDLEYLFGRYGRIREVELKRD---YAFIEFSDTRDADEARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G +GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRILVEFA-----KGVPRGAAGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 117
Query: 159 CRS 161
C++
Sbjct: 118 CKA 120
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|440792856|gb|ELR14064.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 239
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 39/151 (25%)
Query: 11 KLLLCFSSLCQEAEIEDPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV 70
+L LC AE+ P ++ R L + D+ED F YG + V
Sbjct: 4 ELTLC--KFLYFAELSSPDLIRPRRRLAL---------DCRPRDLEDLFYKYGKLTRCDV 52
Query: 71 ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYR 130
R G+GFVE+EDRRDA+DA+R DG + G R+ +E
Sbjct: 53 KR---GYGFVEYEDRRDAQDALRDLDGVSVLGTRIAIEW--------------------- 88
Query: 131 GSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
A+G D C+ CG GH+ARDC++
Sbjct: 89 ----AKGARRTDTDTCFRCGEEGHWARDCKN 115
>gi|115452341|ref|NP_001049771.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|108707560|gb|ABF95355.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548242|dbj|BAF11685.1| Os03g0285900 [Oryza sativa Japonica Group]
gi|222624706|gb|EEE58838.1| hypothetical protein OsJ_10413 [Oryza sativa Japonica Group]
Length = 330
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 15/123 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVGRLSSRTRS--RDLEYLFGRYGRIREVELKRD---YAFIEFSDPRDADEARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G +GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRILVEFA-----KGVPRGAAGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 117
Query: 159 CRS 161
C++
Sbjct: 118 CKA 120
>gi|297843082|ref|XP_002889422.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
gi|297335264|gb|EFH65681.1| hypothetical protein ARALYDRAFT_311385 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ + V PPG+ FVEF+D RDAEDA++G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIQGRDGYDFDGHRLRVELAH 81
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|383856885|ref|XP_003703937.1| PREDICTED: uncharacterized protein LOC100879230 [Megachile
rotundata]
Length = 183
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED++ F YG + VW+A NPPGF F+EF + +AE A +G EI G ++RVE+S
Sbjct: 26 KEDLQTEFEKYGKLNKVWIAFNPPGFAFIEFLNMNEAELACSSMNGTEIMGAKLRVEIS 84
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAH 81
>gi|294461096|gb|ADE76115.1| unknown [Picea sitchensis]
Length = 298
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
DIED F YGP+ + + PPG+ F+EFE+ RDAEDA+RG DG +I+G R+RVE+++
Sbjct: 22 DIEDIFHKYGPVVKIDLKFPPRPPGYCFIEFENARDAEDAIRGRDGYDIDGHRLRVELAH 81
>gi|405966435|gb|EKC31722.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 228
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K ++E F ++GPI +VWVARNPPGF F+ ++ DAE+AV+ G + GRRVRVE +
Sbjct: 24 KYELEREFQHFGPIMDVWVARNPPGFAFLVYKYGEDAEEAVKKLHGNLVCGRRVRVEHAV 83
Query: 112 P 112
P
Sbjct: 84 P 84
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
KED+ S G + +VWVARNPPGF F E+ DAE AVR DG + G R+RVE ++
Sbjct: 23 KEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVNVCGSRIRVEFAH 82
Query: 112 PQKMRG--RSNGRSGGDRGYRGSVRARGRP 139
+ + RS R G G RGS+R R P
Sbjct: 83 GGRSKSAVRSAFRGGRPVG-RGSLRRRNSP 111
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+EF D DA+DA DGR
Sbjct: 13 LYVGRLAPRTRS--RDLEYLFSKYGRIREVELKRD---YAFIEFSDPHDADDAQYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 EVDGSRIIVEFA-----KGVPRG-SGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV---ARNPPGFGFVEFEDRRDAEDAVR 93
+ +YV L S KE IED F YG I+N+ + +R+ P F F++F+DRRDA++AVR
Sbjct: 4 MTVYVG-NLPSNVREKE-IEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 94 GFDGREINGRRVRVEM 109
DG E +G+R+RVE
Sbjct: 62 ARDGYEFDGKRLRVEF 77
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAH 81
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|297820078|ref|XP_002877922.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
gi|297323760|gb|EFH54181.1| hypothetical protein ARALYDRAFT_323893 [Arabidopsis lyrata subsp.
lyrata]
Length = 284
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG +++V + R+ + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRARDLERLFSRYGRVRDVDMKRD---YAFVEFSDPRDADDARYYLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE S R R D G RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRITVEAS-------RGAPRGSRDNGSRGPPPGSGR-------CFNCGVDGHWARD 113
Query: 159 C 159
C
Sbjct: 114 C 114
>gi|5815238|gb|AAD52612.1| splicing factor SR1D [Arabidopsis thaliana]
Length = 261
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ V PPG+ FVEF+D RDAEDA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRDGYDFDGHRLRVELAH 81
>gi|30693839|ref|NP_190918.3| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|75334513|sp|Q9FYB7.1|RSZ32_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z32; AltName:
Full=RS-containing zinc finger protein 32;
Short=At-RS2Z32; Short=At-RSZ32
gi|9795142|emb|CAB67657.2| splicing factor-like protein [Arabidopsis thaliana]
gi|222422875|dbj|BAH19424.1| AT3G53500 [Arabidopsis thaliana]
gi|332645577|gb|AEE79098.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 284
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 19/121 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG +++V + R+ + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRTRDLERLFSRYGRVRDVDMKRD---YAFVEFSDPRDADDARYYLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE S R R D G RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRITVEAS-------RGAPRGSRDNGSRGPPPGSGR-------CFNCGVDGHWARD 113
Query: 159 C 159
C
Sbjct: 114 C 114
>gi|340712414|ref|XP_003394755.1| PREDICTED: hypothetical protein LOC100651873 [Bombus terrestris]
gi|350399719|ref|XP_003485617.1| PREDICTED: hypothetical protein LOC100747513 [Bombus impatiens]
Length = 201
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S KED++ F YG + VWVA NPPGF F+EF + +AE A +G EI G ++RVE
Sbjct: 17 SIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGTEIMGAKLRVE 76
Query: 109 MS 110
+S
Sbjct: 77 IS 78
>gi|328779834|ref|XP_396951.3| PREDICTED: hypothetical protein LOC413508 [Apis mellifera]
Length = 178
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S KED++ F YG + VWVA NPPGF F+EF + +AE A +G EI G ++RVE
Sbjct: 17 SIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGTEIMGAKLRVE 76
Query: 109 MS 110
+S
Sbjct: 77 IS 78
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGRDGYDFDGHRLRVELAH 81
>gi|449451689|ref|XP_004143594.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449451691|ref|XP_004143595.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
gi|449507559|ref|XP_004163066.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
1 [Cucumis sativus]
gi|449507562|ref|XP_004163067.1| PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform
2 [Cucumis sativus]
Length = 309
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 17/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D++D FS YG +++V + R+ + FVEF D RDA+DA +GR
Sbjct: 13 LYVGRLSSRTRS--RDLDDLFSRYGRVRDVDMKRD---YAFVEFSDPRDADDARYSLNGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE++ +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVHGSRIIVEIA-----KGVPRG-PGGSREYLG----RGPPGT--GRCFNCGIDGHWARD 115
Query: 159 CRS 161
C++
Sbjct: 116 CKA 118
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 19/133 (14%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S S+T E ++DAFS +G + V + GFGFV F++++ EDA+ G +G +++
Sbjct: 15 SWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLD 74
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF-------------NPDDKCYE 148
GR + V+ + PQ NG DR RGS RGR + C++
Sbjct: 75 GRNITVDKAQPQGPGRDRNGDRDYDR-ERGSRYERGRDYGGGRAPRGGGGGGGGGGDCFK 133
Query: 149 CGGRGHYARDCRS 161
CG GH+AR+C S
Sbjct: 134 CGKPGHFARECPS 146
>gi|118489183|gb|ABK96398.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 4/61 (6%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ D+ED F +G I++VWVAR PPG+ F++F+D+RDA+DA+ DG+ NG RVE+S
Sbjct: 14 SERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDGK--NG--WRVELS 69
Query: 111 N 111
+
Sbjct: 70 H 70
>gi|148909953|gb|ABR18062.1| unknown [Picea sitchensis]
Length = 331
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVELAH 81
Query: 112 PQKMRGRSNGR 122
+ + +N R
Sbjct: 82 GGRGQSSTNDR 92
>gi|380011044|ref|XP_003689623.1| PREDICTED: uncharacterized protein LOC100871916 [Apis florea]
Length = 201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S KED++ F YG + VWVA NPPGF F+EF + +AE A +G EI G ++RVE
Sbjct: 17 SIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGTEIMGAKLRVE 76
Query: 109 MS 110
+S
Sbjct: 77 IS 78
>gi|448878290|gb|AGE46108.1| arginine/serine-rich splicing factor RSZ21 transcript IV [Sorghum
bicolor]
Length = 99
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGF 95
T ++ED F +G +++VWVAR PPGF F++F+D+RDAEDA+R
Sbjct: 14 TARELEDEFRTFGVLRSVWVARKPPGFAFIDFDDKRDAEDAIRAL 58
>gi|339246347|ref|XP_003374807.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
gi|316971934|gb|EFV55647.1| splicing factor, arginine/serine-rich 6 [Trichinella spiralis]
Length = 305
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 54/91 (59%), Gaps = 12/91 (13%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN-P 112
D+ED F YG I+ + + GFGFVEF+D RDA+DAV +GRE+ G R+ VEM+ P
Sbjct: 105 DVEDFFKGYGRIREILLKN---GFGFVEFDDPRDADDAVYHLNGRELCGERIIVEMTKRP 161
Query: 113 QKMRGRSNGRSGGDRGYRGSVRARGRPFNPD 143
K GR YRGS +RG F+P+
Sbjct: 162 PK------GRDAFRSSYRGSYGSRG--FSPE 184
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVELAH 81
>gi|159484865|ref|XP_001700473.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158272360|gb|EDO98162.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 224
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ED+E F +G ++N+WVAR PPGF F+E +D RDAEDAVR DG + G RV +
Sbjct: 15 EEDLETEFVRFGRLRNIWVARKPPGFAFIEMDDLRDAEDAVRALDG--MKGWRVEI 68
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 25/125 (20%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV+ S+ + +ED++ F YG I ++ + R + F+ ++D AEDA+R D
Sbjct: 8 IYVTNF--SSRTNEEDLQYEFKKYGSIVDINMKR---SYAFITYDDYHSAEDAIRKMDKA 62
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
ING+++ VE + +K +R RG DDKC++CG RGH+A +
Sbjct: 63 VINGKQILVEPAGLKK------------------IRPRGPQL--DDKCFKCGRRGHWANE 102
Query: 159 CRSRR 163
C RR
Sbjct: 103 CDERR 107
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Query: 213 RPFNP--DDKCYECGGRGHYARDCRSRRSGGGGRRRSAVSHAE 253
RP P DDKC++CG RGH+A +C RR RR ++S +E
Sbjct: 80 RPRGPQLDDKCFKCGRRGHWANECDERRR----YRRDSISRSE 118
>gi|224035793|gb|ACN36972.1| unknown [Zea mays]
gi|413950156|gb|AFW82805.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878164|gb|AGE46045.1| arginine/serine-rich splicing factor RS2Z39 transcript III [Zea
mays]
gi|448878166|gb|AGE46046.1| arginine/serine-rich splicing factor RS2Z39 transcript IV [Zea
mays]
Length = 353
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVGRLATRTRS--RDLEHLFGRYGRIREVELKRD---YAFIEFSDHRDADEARYQLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIVVEFA-----KGVPRG-SGGSREYMG----RGPPPG-TGRCFNCGVDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV---ARNPPGFGFVEFEDRRDAEDAVR 93
+ +YV + +++IED F YG I+N+ + +R+ P F F++F+DRRDA++AVR
Sbjct: 4 MTVYVGNLPSDV--REKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 94 GFDGREINGRRVRVEM 109
DG E +G+R+RVE
Sbjct: 62 ARDGYEFDGKRLRVEF 77
>gi|56756196|gb|AAW26273.1| unknown [Schistosoma japonicum]
Length = 224
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED+ S G + +VWVARNPPGF F E+ DAE AVR DG + G R+RVE +
Sbjct: 22 LKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVNVCGSRIRVEFA 81
Query: 111 NPQKMRG--RSNGRSGGDRGYRGSVRARGRP 139
+ + + RS R G G RGS+R R P
Sbjct: 82 HGGRSKSAVRSAFRGGRPVG-RGSLRRRNSP 111
>gi|76162112|gb|AAX30173.2| SJCHGC01414 protein [Schistosoma japonicum]
Length = 97
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 41/67 (61%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 31 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHAV 90
Query: 112 PQKMRGR 118
K R
Sbjct: 91 NNKTANR 97
>gi|413944557|gb|AFW77206.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 330
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 36/169 (21%)
Query: 11 KLLLCFSSLCQEAEIEDPVMMIARYM------------------LVIYVSIVLCSTSSTK 52
KL L FSS + + +++RY +YV + S +
Sbjct: 46 KLQLWFSSFTIKQLQQIVKHIMSRYNDRYDHNNRYDRHGRHGSNTKLYVGQI--SPYTRT 103
Query: 53 EDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNP 112
+D+ED F YG ++NV + R FGFVEF D RDA+DA DGR +G + VE +
Sbjct: 104 QDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGRIFDGSHLIVEFAR- 159
Query: 113 QKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
G RG G V G+ + +CY CG GH+ RDC++
Sbjct: 160 -----------GAQRG-PGGVPLDGKGPSFPGRCYNCGMDGHWVRDCKA 196
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
++++ED F YGP+ ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G R+RVE+
Sbjct: 20 EKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 43 IVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDG 97
I S S+T E ++DAFS +G + V + GFGFV F++++ EDA+ G +G
Sbjct: 11 IGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNG 70
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPF------------NPDDK 145
+++GR + V+ + PQ NG DR RGS RGR +
Sbjct: 71 LDLDGRNITVDKAQPQGPGRDRNGDRDYDR-ERGSRYERGRDYGGGRAPRGGGGGGGGGD 129
Query: 146 CYECGGRGHYARDCRS 161
C++CG GH+AR+C S
Sbjct: 130 CFKCGKPGHFARECPS 145
>gi|308459492|ref|XP_003092065.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
gi|308254397|gb|EFO98349.1| hypothetical protein CRE_24261 [Caenorhabditis remanei]
Length = 112
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T++++ D FS GPIKN+W+A+ PPGF FV F+ A DAV+ +G++I +VEM
Sbjct: 28 ATEQELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNGKKICNLEAKVEM 87
>gi|226469178|emb|CAX70068.1| Serine/arginine repetitive matrix protein 2 [Schistosoma japonicum]
Length = 298
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHA 82
>gi|256084273|ref|XP_002578355.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045236|emb|CCD82784.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 298
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHA 82
>gi|256084271|ref|XP_002578354.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045235|emb|CCD82783.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 301
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHA 82
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ S KED+E F YG + +VWVA NPPGF F+EF + DAE A +G + G ++
Sbjct: 16 LTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSLNGTDFLGSKL 75
Query: 106 RVEMS 110
RVE++
Sbjct: 76 RVEIA 80
>gi|356572371|ref|XP_003554342.1| PREDICTED: uncharacterized protein LOC100789337 [Glycine max]
Length = 297
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 21/124 (16%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + + F FVEF D RDA+DA DGR
Sbjct: 13 LYVGRLSSRTRS--RDLERVFSRYGRIRGVDMKND---FAFVEFSDPRDADDARYSLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNP-DDKCYECGGRGHYAR 157
++ G R+ VE + GG RG R ++ GR P +C+ CG GH+AR
Sbjct: 68 DVEGSRIIVEFAK------------GGPRGSRENL---GRGLPPGSGRCFNCGIDGHWAR 112
Query: 158 DCRS 161
DC++
Sbjct: 113 DCKA 116
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV---ARNPPGFGFVEFEDRRDAEDAVR 93
+ +YV + +++IED F YG I+N+ + +R+ P F F++F+DRRDA++AVR
Sbjct: 4 MTVYVGNLPSDV--REKEIEDIFHKYGEIRNIDIKSRSRDSPAFAFIQFDDRRDAKEAVR 61
Query: 94 GFDGREINGRRVRVEM 109
DG E +G+R+RVE
Sbjct: 62 ACDGYEFDGKRLRVEF 77
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 5/68 (7%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S +T++ +EDAFS YG I NV VARN GFGFV FE+ DA+DA+ G +G+ +
Sbjct: 12 LSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGMNGKSV 71
Query: 101 NGRRVRVE 108
+GR +RV+
Sbjct: 72 DGRTIRVD 79
>gi|85000399|ref|XP_954918.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65303064|emb|CAI75442.1| RNA-binding protein, putative [Theileria annulata]
Length = 146
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 10/64 (15%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFV----------EFEDRRDAEDAVRGFDGR 98
S T +D++ FS YG + NVWVARNPPGFGFV F+D RDA+DA+ +G+
Sbjct: 21 SVTTQDLDSLFSKYGKVTNVWVARNPPGFGFVVCYNLFHLSQTFDDPRDAKDALIELNGK 80
Query: 99 EING 102
+++G
Sbjct: 81 DLHG 84
>gi|195624410|gb|ACG34035.1| splicing factor, arginine/serine-rich 6 [Zea mays]
gi|448878160|gb|AGE46043.1| arginine/serine-rich splicing factor RS2Z39 transcript I [Zea mays]
Length = 353
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVGRLATRTRS--RDLEHLFGRYGRIREVELKRD---YAFIEFSDHRDADEARYQLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G SGG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIVVESA-----KGVPRG-SGGSREYMG----RGPPPG-TGRCFNCGVDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ + + PPG+ FVEFED RDA+DA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHRLRVELAH 81
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+EF D RDAE+A DGR
Sbjct: 21 LYVGRLSSRTRS--RDLEYHFSRYGRIREVELKRD---YAFIEFSDPRDAEEARYNLDGR 75
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 76 DVDGSRILVEFA-----KGVPRG-PGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 124
Query: 159 CRS 161
C++
Sbjct: 125 CKA 127
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+EF D RDAE+A DGR
Sbjct: 13 LYVGRLSSRTRS--RDLEYHFSRYGRIREVELKRD---YAFIEFSDPRDAEEARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRILVEFA-----KGVPRG-PGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|308452462|ref|XP_003089055.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
gi|308243476|gb|EFO87428.1| hypothetical protein CRE_25996 [Caenorhabditis remanei]
Length = 116
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T++++ D FS GPIKN+W+A+ PPGF FV F+ A DAV+ +G +I +VEM
Sbjct: 28 ATEKELHDVFSVMGPIKNIWLAKRPPGFAFVTFKRTVHAYDAVKYLNGTKICNLEAKVEM 87
Query: 110 -----SNPQKMRGRSNGRSGGDRGYRGS 132
K R N + D +G+
Sbjct: 88 CEVDFQEDLKRRTEENKKKLKDSNVQGT 115
>gi|224088597|ref|XP_002308490.1| predicted protein [Populus trichocarpa]
gi|222854466|gb|EEE92013.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG +++V + R+ + FVEF D RDA+DA DG+
Sbjct: 13 LYVGHLAARTRS--RDLEHLFSKYGRVRDVDMKRD---YAFVEFSDPRDADDARHYLDGK 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E +G R+ VE + G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 EFDGSRIIVEF---------AKGVPRGSREYLG----RGPPPG-SGRCFNCGIDGHWARD 113
Query: 159 CRSRRSGGSGRPELCKINGRRVRVEMSNPQKM-RGRSNGRSGG 200
C++ + C G R ++P+K+ RG+S RS G
Sbjct: 114 CKA--GDWKNKCYRCGERGHIERNCKNSPKKLTRGKSYSRSPG 154
>gi|345488330|ref|XP_001605989.2| PREDICTED: hypothetical protein LOC100122382 [Nasonia vitripennis]
Length = 188
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S KED++ F +G + VWVA NPPGF F+EF + +AE+A +G EI G ++RVE
Sbjct: 17 SIKKEDLQMQFEKFGKLNKVWVAFNPPGFAFIEFFNMDEAEEACSNMNGTEIMGAKLRVE 76
Query: 109 MS 110
+S
Sbjct: 77 IS 78
>gi|226486670|emb|CAX74412.1| RNA-binding protein 1 [Schistosoma japonicum]
gi|226486672|emb|CAX74413.1| RNA-binding protein 1 [Schistosoma japonicum]
Length = 90
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 41/67 (61%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K DIE F +GPI +VWVARNPPGF F+ F+ DA+ AVR DG G R+RVE +
Sbjct: 24 KVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSRPFGSRLRVEHAV 83
Query: 112 PQKMRGR 118
K R
Sbjct: 84 NNKTANR 90
>gi|108861824|gb|ABG21814.1| alternative splicing factor SRp20/9G8-like protein [Schistosoma
mansoni]
Length = 245
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 38/61 (62%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
TS K DIE S GPI +VWVARNPP F F+ F+ DA+ AVR DG G R+RV
Sbjct: 29 TSWWKVDIEQELSVLGPIADVWVARNPPVFAFIVFKYAEDADRAVRRMDGSRPFGSRLRV 88
Query: 108 E 108
E
Sbjct: 89 E 89
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 60/121 (49%), Gaps = 29/121 (23%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV V S +T+ D+ED FS YG +++V + + + FVE D RDAEDA DG+
Sbjct: 6 LYVGNV--SRHATRRDLEDLFSKYGRVRDVRLLSD---YAFVEMGDERDAEDARYYLDGK 60
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ G R+RVE + + R P P KCY CG GH+AR+
Sbjct: 61 RLEGERIRVEFAKNE----------------------RAPPRQP--KCYNCGLLGHFARE 96
Query: 159 C 159
C
Sbjct: 97 C 97
>gi|125550950|gb|EAY96659.1| hypothetical protein OsI_18573 [Oryza sativa Indica Group]
Length = 338
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 19/122 (15%)
Query: 39 IYV-SIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
+YV I LC+ + ED+E+ FS YG ++ V + +GFVEF D RDA DA DG
Sbjct: 20 LYVGHISLCTRA---EDLENLFSRYGRVRFVDLKNE---YGFVEFSDPRDANDARLDLDG 73
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 157
R+ +G + V+ + RG G GG RGY+ RP + D C+ CG GH+ R
Sbjct: 74 RKYDGSDIIVQFA-----RGVERG-LGGSRGYKA------RPAHGSDHCFNCGMEGHWHR 121
Query: 158 DC 159
+C
Sbjct: 122 NC 123
>gi|147855944|emb|CAN80749.1| hypothetical protein VITISV_040486 [Vitis vinifera]
Length = 282
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YGPI ++ + PPG+ FVEFED RDAEDA+ G DG +G R+RVE+
Sbjct: 20 EREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|296089689|emb|CBI39508.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YGPI ++ + PPG+ FVEFED RDAEDA+ G DG +G R+RVE+
Sbjct: 20 EREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYGRDGYNFDGHRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +++D F YGPI V + PPG+ FVEFED RDAEDA+RG DG +G R+RVE+
Sbjct: 57 QREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARDAEDAIRGRDGYNFDGCRLRVEL 116
Query: 110 SN 111
++
Sbjct: 117 AH 118
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG + +G ++RVE+++
Sbjct: 22 EVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYDFDGHQLRVELAH 81
>gi|356572373|ref|XP_003554343.1| PREDICTED: uncharacterized protein LOC100789862 [Glycine max]
Length = 287
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E AFS YG ++ V + + F FV+F D RDA+DA DGR
Sbjct: 13 LYVGHLSSRTRS--RDLERAFSRYGRVRGVDMKND---FAFVDFSDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIIVEF---------AKGAPRGSREYLG----RGPPPG-SGRCFNCGLDGHWARD 113
Query: 159 CRS 161
C++
Sbjct: 114 CKA 116
>gi|328711080|ref|XP_003244442.1| PREDICTED: hypothetical protein LOC100575791 [Acyrthosiphon pisum]
Length = 164
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+S T+ DIE F YG + VW++R P F FV ++ +DA +A + +G E+ G + V
Sbjct: 59 SSITRRDIEKEFERYGTLLEVWMSRTRPSFAFVVYKRDKDAAEAQKRTNGMELYGSFLTV 118
Query: 108 EMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ K RG S RS + YR S+R CY C GH++R C+
Sbjct: 119 SFA---KTRGLSR-RSSRNNSYRDSLR-----------CYSCNRVGHFSRSCK 156
>gi|443725384|gb|ELU13007.1| hypothetical protein CAPTEDRAFT_30194, partial [Capitella teleta]
Length = 79
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ + F YG +K+ WVA NPPGFGFVE RDA A DG ++GRR+ VEMS
Sbjct: 12 TRRQLRSMFGKYGGVKSTWVAWNPPGFGFVEMRYERDAHAACEDLDGTTLDGRRLIVEMS 71
Query: 111 NPQ 113
+ +
Sbjct: 72 SGE 74
>gi|332026868|gb|EGI66971.1| RNA-binding protein Rsf1 [Acromyrmex echinatior]
Length = 258
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S KED++ F YG + VWVA NPPGF F+EF + +AE A +G EI G ++RVE
Sbjct: 17 SIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGMEIMGAKLRVE 76
Query: 109 MS 110
+S
Sbjct: 77 IS 78
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPGF FVEFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 88 EVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAH 147
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 52 KEDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
++D+ED F YG I ++ + PP FGFV FED RDA++AVR DG + +G R+RVEM
Sbjct: 67 EKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARDGYDFDGYRLRVEM 126
Query: 110 S 110
S
Sbjct: 127 S 127
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPGF FVEFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 88 EVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAH 147
>gi|326512990|dbj|BAK03402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ST + +D+E F YG I+ V + + +GFVEF + RDA+DA DG+
Sbjct: 41 LYVGHL--STHTRTKDVEYLFGRYGRIRCVELKHD---YGFVEFSNPRDADDARYELDGQ 95
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + RG G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 96 DVDGSRIIVEFA-----RGTPRG-PGGSREYLG----RGPPPG-SGRCFNCGIDGHWARD 144
Query: 159 CRS 161
C +
Sbjct: 145 CNA 147
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ + + PPG+ FVEFED RDA+DA+ G DG + +G +RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAH 81
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPGF FVEFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 88 EVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAH 147
>gi|209881965|ref|XP_002142420.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209558026|gb|EEA08071.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 241
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR-VRVEM 109
T ++E F +G + VWVARNPPGFGFV + + RDAE +V+ DG I GRR +RVEM
Sbjct: 20 TPGELEREFRRFGVVDAVWVARNPPGFGFVTYANPRDAELSVQEMDGSTIFGRRPIRVEM 79
Query: 110 SNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR-----SRRS 164
+ + + R + SG G G P P Y RG Y + R +RRS
Sbjct: 80 A--KSIYSRRDSSSGRHNGMNGPYSRNKSP--PPLPPYRI--RGRYPSNVRYDDKNTRRS 133
Query: 165 GGSGR 169
+ R
Sbjct: 134 PSTSR 138
>gi|356505156|ref|XP_003521358.1| PREDICTED: uncharacterized protein LOC100812698 [Glycine max]
Length = 287
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 23/125 (18%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E AFS YG ++ V + + F FV+F D RDA+DA DGR
Sbjct: 13 LYVGHLSSRTRS--RDLERAFSRYGRVRGVDMKND---FAFVDFSDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDKCYECGGRGHYA 156
+++G R+ VE + G G R Y RG GR C+ CG GH+A
Sbjct: 68 DVDGSRIIVEF---------AKGAPRGSREYLGRGPPPGSGR-------CFNCGLDGHWA 111
Query: 157 RDCRS 161
RDC++
Sbjct: 112 RDCKA 116
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I++V + PP F FVEFED+RDA DAVRG DG E G+R+RVE+S+
Sbjct: 14 EVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGIEFQGQRLRVEISH 73
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I++V + PP F FVEFED RDA DAVRG DG E G+R+RVE+S+
Sbjct: 19 EVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDGIEFQGQRLRVEVSH 78
>gi|388509088|gb|AFK42610.1| unknown [Medicago truncatula]
Length = 305
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG +++V + + + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRLSSRTRS--RDLERVFSRYGSVRDVDMKHD---YAFVEFRDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGR-PFNPDDKCYECGGRGHYAR 157
+I+G R+ VE + G G R R S GR P +C+ CG GH+AR
Sbjct: 68 DIDGSRLIVEF---------AKGVPRGSRDSRDSREYLGRGPPPGSGRCFNCGIDGHWAR 118
Query: 158 DCRS 161
DC++
Sbjct: 119 DCKA 122
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 23/162 (14%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG +++V + R+ + FVEF D RDA+DA DG+
Sbjct: 13 LYVGHLAARTRS--RDLEHLFSKYGRVRDVDMKRD---YAFVEFSDPRDADDARHYLDGK 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DFDGSRIIVEF---------AKGVPRGSREYLG----RGPPPG-SGRCFNCGIDGHWARD 113
Query: 159 CRSRRSGGSGRPELCKINGRRVRVEMSNPQKM--RGRSNGRS 198
C++ + C G R ++P+K+ RGRS RS
Sbjct: 114 CKA--GDWKNKCYRCGERGHIERNCKNSPKKLTKRGRSYSRS 153
>gi|302791860|ref|XP_002977696.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
gi|300154399|gb|EFJ21034.1| hypothetical protein SELMODRAFT_107678 [Selaginella moellendorffii]
Length = 298
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+I+D F YGPI ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 21 EIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGYNFDGYRLRVEIAH 80
Query: 112 -----PQKMRGRSNGRSGGDRGYRGSVRA 135
P R S G GG R R
Sbjct: 81 GGRGPPSSDRYSSYGGRGGSVSRRSEYRV 109
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 82/179 (45%), Gaps = 25/179 (13%)
Query: 3 NKMSHFKLKLLLCFSSLCQEAEIEDPVMMIARYMLVIYVS-------IVLCSTSSTKEDI 55
NK+S + L L F + + + P+ + ++L + + S S+T E +
Sbjct: 2 NKISPYSLYWLSFFQQVLTFSHL--PMFCVCLFILPVMADEDEYRCFVGNLSWSTTDESL 59
Query: 56 EDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+DAFS YG + V + GF FV F++++ E+A+ +G ++ GR + V+ +
Sbjct: 60 KDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLEGRAITVDKA 119
Query: 111 NPQKMRGRSNGRSGGDRGYRGS----------VRARGRPFNPDDKCYECGGRGHYARDC 159
PQ + NG DR RGS RA C++CG GH+AR+C
Sbjct: 120 QPQGVGRDRNGDRDFDRD-RGSRGDRGRDYGGGRAPRGGSGGGGDCFKCGKPGHFAREC 177
>gi|115462263|ref|NP_001054731.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|46981336|gb|AAT07654.1| unknown protein [Oryza sativa Japonica Group]
gi|113578282|dbj|BAF16645.1| Os05g0162600 [Oryza sativa Japonica Group]
gi|215693366|dbj|BAG88748.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768462|dbj|BAH00691.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630300|gb|EEE62432.1| hypothetical protein OsJ_17224 [Oryza sativa Japonica Group]
Length = 338
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 17/121 (14%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T + ED+E+ FS YG ++ V + +GFVEF D RDA DA DGR
Sbjct: 20 LYVGHISLRTRA--EDLENLFSRYGRVRFVDLKNE---YGFVEFSDPRDANDARLDLDGR 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G + V+ + RG G GG RGY+ RP + D C+ CG GH+ R+
Sbjct: 75 KYDGSDIIVQFA-----RGVERG-LGGSRGYKA------RPAHGSDHCFNCGMEGHWHRN 122
Query: 159 C 159
C
Sbjct: 123 C 123
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KE +E+ F+ +G + +VW+A NPPGF F+EF ++ +A A +G+E+ G ++RVE+S
Sbjct: 20 KEQLEEEFTRFGKLNSVWLAHNPPGFAFIEFANKDEAISACDSLNGQELLGSKLRVEIS 78
>gi|405954502|gb|EKC21922.1| Splicing factor, arginine/serine-rich 6 [Crassostrea gigas]
Length = 231
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPP-GFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S ++ +ED F YG + V +GFV++EDRRDAEDA++ +GREI G +
Sbjct: 15 SKNTQPRHLEDVFEPYGRLIRCDVKYGAEMAYGFVDYEDRRDAEDALKYENGREICGSSI 74
Query: 106 RVEMS--NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
RVE + NP++ S+ R GG D+CY C GH+ARDC
Sbjct: 75 RVEWAKGNPRRPYAASSNRGGGMY----------------DECYRCHRTGHFARDC 114
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ ++ + PPG+ FVEFED RDA+DA+ G DG + +G +RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAH 81
>gi|322798568|gb|EFZ20180.1| hypothetical protein SINV_12527 [Solenopsis invicta]
Length = 199
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
KED++ F YG + VWVA NPPGF F+EF + +AE A +G EI G ++RVE+S
Sbjct: 24 KEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGMEIMGAKLRVEIS 82
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPGF FVEFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAH 81
>gi|255644623|gb|ACU22814.1| unknown [Glycine max]
gi|255644635|gb|ACU22820.1| unknown [Glycine max]
gi|255644651|gb|ACU22828.1| unknown [Glycine max]
gi|255648053|gb|ACU24482.1| unknown [Glycine max]
Length = 167
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E AFS YG ++ V + + F FV+F D RDA+DA DGR
Sbjct: 13 LYVGHLSSRTRS--RDLERAFSRYGRVRGVDMKND---FAFVDFSDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIIVEF---------AKGAPRGSREYLG----RGPPPGS-GRCFNCGLDGHWARD 113
Query: 159 CRS 161
C++
Sbjct: 114 CKA 116
>gi|268579471|ref|XP_002644718.1| Hypothetical protein CBG14713 [Caenorhabditis briggsae]
Length = 113
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+T++++ D FS GPIKN+W+A+ PPGF FV ++ A DAV+ +G++I +VE
Sbjct: 27 DATEQELHDVFSVMGPIKNIWMAKRPPGFAFVTYKRTVHAYDAVKYLNGKKICDLEAKVE 86
Query: 109 M 109
M
Sbjct: 87 M 87
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+IED F YG I +V V PPG+ F+EFED RDAEDA+RG DG +G R+RVE ++
Sbjct: 22 EIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGHRIRVEFAH 81
Query: 112 PQKMRGRSNGR 122
+ S GR
Sbjct: 82 GGRRTSSSLGR 92
>gi|312088410|ref|XP_003145851.1| arginine/serine-rich splicing factor 3 [Loa loa]
gi|307758983|gb|EFO18217.1| arginine/serine-rich splicing factor 3 [Loa loa]
Length = 228
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
T+ +D+ED FS YG + V + R P F FVEFED RDAEDAVRG DG + G R+R
Sbjct: 14 TTVRAKDVEDIFSKYGKVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLR 73
Query: 107 VEM 109
VE
Sbjct: 74 VEF 76
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
++++ED F YG I ++ V PPG+ FVEFED DA+DA+RG DG + +G R+RVE+
Sbjct: 20 EKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGRDGYDFDGHRLRVEL 79
Query: 110 SNPQKMRGRSNGR 122
++ + SN R
Sbjct: 80 AHGGRGHSSSNDR 92
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 52 KEDIEDAFSYYGPIKNVWVARN-PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++++ED F YG IK V + P F FVEFED RDAEDAVR DG E +GRR+RVE +
Sbjct: 22 EKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>gi|9843663|emb|CAC03605.1| splicing factor RSZ33 [Arabidopsis thaliana]
Length = 290
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG +++V + R+ + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRTRDLERLFSRYGRVRDVDMKRD---YAFVEFGDPRDADDARHYLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE S R R D RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRITVEFS-------RGAPRGSRDFDSRGPPPGAGR-------CFNCGVDGHWARD 113
Query: 159 C 159
C
Sbjct: 114 C 114
>gi|30687109|ref|NP_850280.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
gi|75331124|sp|Q8VYA5.1|RSZ33_ARATH RecName: Full=Serine/arginine-rich splicing factor RS2Z33; AltName:
Full=RS-containing zinc finger protein 33;
Short=At-RS2Z33; Short=At-RSZ33
gi|18252179|gb|AAL61922.1| unknown protein [Arabidopsis thaliana]
gi|21386957|gb|AAM47882.1| unknown protein [Arabidopsis thaliana]
gi|51971244|dbj|BAD44314.1| unknown protein [Arabidopsis thaliana]
gi|330254293|gb|AEC09387.1| arginine/serine-rich zinc knuckle-containing protein 33
[Arabidopsis thaliana]
Length = 290
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG +++V + R+ + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRTRDLERLFSRYGRVRDVDMKRD---YAFVEFGDPRDADDARHYLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE S R R D RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRITVEFS-------RGAPRGSRDFDSRGPPPGAGR-------CFNCGVDGHWARD 113
Query: 159 C 159
C
Sbjct: 114 C 114
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE
Sbjct: 22 EVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVE 78
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 52 KEDIEDAFSYYGPIKNVWVARN-PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++++ED F YG IK V + P F FVEFED RDAEDAVR DG E +GRR+RVE +
Sbjct: 22 EKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
Query: 111 NPQKMRGRS 119
RG S
Sbjct: 82 RGVGPRGPS 90
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED FS YGP+ + + PPG+ FVEFED RDA+DA+ G DG + +G +RVE+++
Sbjct: 22 EVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDFDGHHLRVELAH 81
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE
Sbjct: 22 EVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVE 78
>gi|224123080|ref|XP_002318990.1| predicted protein [Populus trichocarpa]
gi|222857366|gb|EEE94913.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFE+ RDAEDA+RG DG +G R+RVE+++
Sbjct: 21 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEEARDAEDAIRGRDGYNFDGCRLRVELAH 80
>gi|363807264|ref|NP_001242616.1| uncharacterized protein LOC100813237 [Glycine max]
gi|255647309|gb|ACU24121.1| unknown [Glycine max]
Length = 299
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG ++ V + + F FVEF D RDA+DA DGR
Sbjct: 13 LYVGRLSSRTRS--RDLERVFSRYGRVRGVDMKND---FAFVEFSDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG-SVRARGRPFNPDDKCYECGGRGHYAR 157
++ G R+ VE + GG RG R RG P +C+ CG GH+AR
Sbjct: 68 DVEGSRIIVEFAK------------GGPRGSRDREYMGRGPPPG-SGRCFNCGIDGHWAR 114
Query: 158 DCRS 161
DC++
Sbjct: 115 DCKA 118
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF D RDA++A DGR
Sbjct: 13 LYVGRLAPRTRS--RDLEYLFGRYGRIREVELKRD---YAFIEFSDHRDADEARYQLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIVVEFA-----KGVPRG-PGGSREYMG----RGPPPG-TGRCFNCGIDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|297736448|emb|CBI25319.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+ED FS YG +++V + + F FVEF D RDA+DA +GR
Sbjct: 45 LYVGRLSSRTRS--RDLEDLFSRYGRVRDVDMKHD---FAFVEFSDPRDADDARYSLNGR 99
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + + G RG GR C+ CG GH+ARD
Sbjct: 100 DFDGSRIIVEFAKGGPRGPGGSREYLG----RGPPPGSGR-------CFNCGIDGHWARD 148
Query: 159 CRS 161
C++
Sbjct: 149 CKA 151
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPGF FVEFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGRDGYNFDGNRLRVELAH 81
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 38/60 (63%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
KED+ S G + +VWVARNPPGF F E+ DAE AVR DG + G R+RVE ++
Sbjct: 23 KEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVRSLDGVNVCGSRIRVEFAH 82
>gi|301116808|ref|XP_002906132.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
gi|262107481|gb|EEY65533.1| pre-mRNA-splicing factor SF2 [Phytophthora infestans T30-4]
Length = 297
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I+++ V PP F FV+FED RDAEDA+RG DG + +G R+RVE +N
Sbjct: 19 EVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDARDAEDAIRGRDGYDYDGARLRVEAAN 78
>gi|357516353|ref|XP_003628465.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522487|gb|AET02941.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 326
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE ++
Sbjct: 48 EVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAH 107
>gi|357511859|ref|XP_003626218.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355501233|gb|AES82436.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 296
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 15/82 (18%)
Query: 54 DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F +GPI ++ + PPG+ FVEFED RDAEDA+R DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKFGPIVDIELKIPPRPPGYAFVEFEDARDAEDAIRYRDGYKFDGFRLRVELAH 81
Query: 112 PQKMRGRSNGRSGGDRGYRGSV 133
G RGY SV
Sbjct: 82 -------------GGRGYSSSV 90
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPGF FVEFED RDAEDA++G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLRVELAH 81
Query: 112 PQKMRGRSNGRS 123
GR+N S
Sbjct: 82 ----GGRANSSS 89
>gi|313231379|emb|CBY08494.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG-REINGR-RVRVEMSN 111
D+E+ F YG IK ++VARNPPGF +++F R A+ AVR R+I GR RV+VE+SN
Sbjct: 19 DLEEEFQDYGHIKEIFVARNPPGFAYIDFVSERSAKTAVREMQSRRKICGRKRVKVELSN 78
Query: 112 PQKMRGRSNGRSGGDRGYR 130
+ + R RS YR
Sbjct: 79 -RARKKRDRERSISPETYR 96
>gi|189236212|ref|XP_001812169.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
gi|270005771|gb|EFA02219.1| hypothetical protein TcasGA2_TC007880 [Tribolium castaneum]
Length = 222
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 18/115 (15%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K D+E F+ +G +K VW+ + P FGF F+D++ A A++ DG E+ G R+RV +
Sbjct: 70 KSDLEKVFAPFGDLKEVWMTNSTPCFGFAVFKDKKAANAALKATDGIEVAGSRIRVTHAR 129
Query: 112 PQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
P R R +GR R FN + +CY+CG GH+ RDC GG
Sbjct: 130 P---RTRGSGR---------------RFFNSNMRCYQCGYSGHFYRDCPELNGGG 166
Score = 37.7 bits (86), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 18/72 (25%)
Query: 174 KINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 233
++ G R+RV + P R R +GR R FN + +CY+CG GH+ RD
Sbjct: 117 EVAGSRIRVTHARP---RTRGSGR---------------RFFNSNMRCYQCGYSGHFYRD 158
Query: 234 CRSRRSGGGGRR 245
C GGG +R
Sbjct: 159 CPELNGGGGDKR 170
>gi|255568494|ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223535518|gb|EEF37187.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 305
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 23/125 (18%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG +++V + R+ + FVEF D RDA+DA DG+
Sbjct: 13 LYVGHLASRTRS--RDLEYLFSKYGRVRDVDMKRD---YAFVEFSDPRDADDARYHLDGK 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDKCYECGGRGHYA 156
+++G R+ VE + G G R Y RG GR C+ CG GH+A
Sbjct: 68 DLDGSRIIVEF---------AKGVPRGSREYLGRGPPPGSGR-------CFNCGIDGHWA 111
Query: 157 RDCRS 161
RDC++
Sbjct: 112 RDCKA 116
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + + D+E F YG ++ + + G+GFVEFED RDA+DAV+ DG+++NG RV
Sbjct: 13 VSDETRERDVEKFFKGYGKLREIALKN---GYGFVEFEDHRDADDAVQDLDGKDMNGSRV 69
Query: 106 RVEMS-NPQKMRG 117
RVE + +P+ RG
Sbjct: 70 RVEFARSPRDKRG 82
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 67/123 (54%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E F YG I+ V + R+ + F+EF + RDA++A DGR
Sbjct: 13 LYVGRLAPRTRS--RDLEYLFGKYGRIREVELKRD---YAFIEFSEHRDADEARYQLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DVDGSRIVVEFA-----KGVPRG-PGGSREYMG----RGPPPG-TGRCFNCGMDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 53 EDIEDAFSYYGPIKNVWVARNP-PGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+++ED F YG IK + V P F F+EFED RDAEDAVR DG E +GRR+RVE +
Sbjct: 22 KEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAEDAVRARDGYEFDGRRIRVEFT 80
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNP-PGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++++ED F YG IK + + P F FVEFED RDAEDAVR DG E +GRR+RVE +
Sbjct: 22 EKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 81
>gi|357511267|ref|XP_003625922.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355500937|gb|AES82140.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 401
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE ++
Sbjct: 123 EVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAH 182
>gi|242089645|ref|XP_002440655.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
gi|241945940|gb|EES19085.1| hypothetical protein SORBIDRAFT_09g004685 [Sorghum bicolor]
Length = 241
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S + +D ED FS YG ++NV + R+ FGFVEF D RDA+DA DGR
Sbjct: 2 LYVGQI--SPHTRTQDHEDLFSKYGRLRNVDLKRD---FGFVEFSDPRDADDARHDLDGR 56
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+G + VE + RG G G + RG PF +CY CG G + RD
Sbjct: 57 RFDGSYIIVEFA-----RGARRGPGG------VPLDVRGPPFP--GRCYNCGMDG-WVRD 102
Query: 159 CRS 161
C++
Sbjct: 103 CKA 105
>gi|357516355|ref|XP_003628466.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522488|gb|AET02942.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 329
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE ++
Sbjct: 48 EVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAH 107
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPGF FVEFED RDAEDA++G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGRDGYNFDGNRLRVELAH 81
Query: 112 PQKMRGRSNGRS 123
GR+N S
Sbjct: 82 G----GRANSSS 89
>gi|428183363|gb|EKX52221.1| hypothetical protein GUITHDRAFT_41825, partial [Guillardia theta
CCMP2712]
Length = 195
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 54 DIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
DIED F YG I+++ V PP F FV FED RDAEDA+RG DG G R+R EMS
Sbjct: 14 DIEDLFYKYGRIRDIEVKTPNRPPAFAFVSFEDYRDAEDAIRGRDGISFEGARLRCEMS 72
>gi|302795628|ref|XP_002979577.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
gi|300152825|gb|EFJ19466.1| hypothetical protein SELMODRAFT_36388 [Selaginella moellendorffii]
Length = 236
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+I+D F YGPI ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+++
Sbjct: 19 EIDDLFHKYGPIVDIDLKLPPRPPGYCFIEFEDVRDAEDAIRGRDGYNFDGYRLRVEIAH 78
Query: 112 -----PQKMRGRSNGRSGGDRGYRGSVRA 135
P R S G GG R R
Sbjct: 79 GGRGPPSSDRYSSYGGRGGSVSRRSEYRV 107
>gi|432113649|gb|ELK35931.1| Vascular endothelial zinc finger 1 [Myotis davidii]
Length = 688
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|324504146|gb|ADY41791.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
TS +DIED F+ +G + V + + PP F FVEFED RDAEDAVR DG + G R+R
Sbjct: 14 TSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDGYDFYGYRLR 73
Query: 107 VEMSNPQKMRGRSNGR-SGGDRGY 129
VE RG G DRGY
Sbjct: 74 VEFPRGVGPRGPGGRPLHGNDRGY 97
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
+ARY+ S+ + S S ED+ F YGP+ +V++ +R P GF +++FED
Sbjct: 1 MARYLRPPNTSLFIRNISDESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGRSNG 121
RDAEDA+ D + + GR++ ++ + P +M+G+ G
Sbjct: 61 VRDAEDALHNLDRKWVCGRQIEIQFAQGDRKTPNQMQGKEGG 102
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE ++
Sbjct: 48 EVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAH 107
>gi|402587972|gb|EJW81906.1| splicing factor [Wuchereria bancrofti]
Length = 228
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
T+ +D+ED FS YG + V + R P F FVEFED RDAEDAVRG DG + G R+R
Sbjct: 14 TTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLR 73
Query: 107 VEM 109
VE
Sbjct: 74 VEF 76
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 53 EDIEDAFSYYGPIKNVWVARN-PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+++ED F YG IK + + P F FVEFED RDAEDAVR DG E +GRR+RVE +
Sbjct: 24 KEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEFT 82
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + + D+E F YG ++ V + G+GFVEFED RDA+DAV+ DG+++NG RV
Sbjct: 13 ISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKDMNGSRV 69
Query: 106 RVEMS 110
RVE +
Sbjct: 70 RVEFA 74
>gi|170588713|ref|XP_001899118.1| SF2 [Brugia malayi]
gi|158593331|gb|EDP31926.1| SF2, putative [Brugia malayi]
Length = 228
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
T+ +D+ED FS YG + V + R P F FVEFED RDAEDAVRG DG + G R+R
Sbjct: 14 TTVRAKDVEDIFSKYGRVLYVDLKDRRQPYFAFVEFEDARDAEDAVRGRDGYDYEGYRLR 73
Query: 107 VEM 109
VE
Sbjct: 74 VEF 76
>gi|224100725|ref|XP_002311989.1| predicted protein [Populus trichocarpa]
gi|222851809|gb|EEE89356.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 20/126 (15%)
Query: 47 STSSTKEDIEDAFSYYGPIK--NVWVARN---PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S T+ +E+AF +G I V + R+ P GFGF+ F DRR +DA+R GR+
Sbjct: 11 SWDITERQLENAFDRFGKIVECQVMLERDTGRPRGFGFITFADRRAMDDAIREMHGRDFG 70
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARG--------RPFNPDDKCYECGGRG 153
R + V + P KM G + D GYRG RP D+C++CG G
Sbjct: 71 DRVISVNKAQP-KMGGDDS-----DHGYRGGYSTGSRGGYGGGDRPAGQ-DECFKCGRSG 123
Query: 154 HYARDC 159
H+ARDC
Sbjct: 124 HWARDC 129
>gi|159163525|pdb|1X4A|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor Sf2
Length = 109
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 37 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF- 95
Query: 111 NPQKMRGRSNGRSGG 125
P+ RG +G S G
Sbjct: 96 -PRSGRGTGSGPSSG 109
>gi|449485688|ref|XP_004157245.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 322
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDAEDA+ G DG + +G R+RVE ++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAH 81
>gi|224121292|ref|XP_002330791.1| predicted protein [Populus trichocarpa]
gi|222872593|gb|EEF09724.1| predicted protein [Populus trichocarpa]
Length = 60
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++ D+ED F +G I++VWVAR PPG+ F++F+D+RDA+DA+ DG
Sbjct: 14 SERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELDG 60
>gi|449435631|ref|XP_004135598.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 315
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDAEDA+ G DG + +G R+RVE ++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAEDAIYGRDGYKFDGCRLRVEFAH 81
>gi|359486310|ref|XP_002281756.2| PREDICTED: uncharacterized protein LOC100251921 [Vitis vinifera]
Length = 304
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+ED FS YG +++V + + F FVEF D RDA+DA +GR
Sbjct: 13 LYVGRLSSRTRS--RDLEDLFSRYGRVRDVDMKHD---FAFVEFSDPRDADDARYSLNGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + + G RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRIIVEFAKGGPRGPGGSREYLG----RGPPPGSGR-------CFNCGIDGHWARD 116
Query: 159 CRS 161
C++
Sbjct: 117 CKA 119
>gi|68037673|gb|AAY84884.1| alternative splicing regulator [Triticum aestivum]
Length = 284
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPGF FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGYNFDGNRLRVELAH 81
Query: 112 PQKMRGRSNGRS 123
GR+N S
Sbjct: 82 ----GGRANSSS 89
>gi|357121520|ref|XP_003562467.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 288
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPGF FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIHGRDGYNFDGNRLRVELAH 81
Query: 112 PQKMRGRSNGRS 123
GR+N S
Sbjct: 82 ----GGRANSSS 89
>gi|356505580|ref|XP_003521568.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Glycine max]
Length = 326
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ED F YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE
Sbjct: 22 EVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGRDGYDFDGHRLRVE 78
>gi|341889018|gb|EGT44953.1| hypothetical protein CAEBREN_15444 [Caenorhabditis brenneri]
gi|341896973|gb|EGT52908.1| hypothetical protein CAEBREN_18115 [Caenorhabditis brenneri]
Length = 305
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFD 96
+ + I ++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGNIRDVLLKN---GFGFVEFDDKRDAEDAVHDLN 57
Query: 97 GREINGRRVRVEMSNP 112
G+E+ G RV ++ S P
Sbjct: 58 GKELGGERVILDYSKP 73
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + + D+E F YG ++ V + G+GFVEFED RDA+DAV+ DG+++NG RV
Sbjct: 13 ISDDTRERDVEKFFKGYGKLREVALKN---GYGFVEFEDHRDADDAVQDLDGKDMNGSRV 69
Query: 106 RVEMS 110
RVE +
Sbjct: 70 RVEFA 74
>gi|324504398|gb|ADY41900.1| Serine/arginine-rich splicing factor 1 [Ascaris suum]
Length = 233
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 48 TSSTKEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
TS +DIED F+ +G + V + + PP F FVEFED RDAEDAVR DG + G R+R
Sbjct: 14 TSVRTKDIEDIFTKFGKVLFVDLKDKRPPYFAFVEFEDPRDAEDAVRSRDGYDFYGYRLR 73
Query: 107 VEMSNPQKMRGRSNGR-SGGDRGY 129
VE RG G DRGY
Sbjct: 74 VEFPRGVGPRGPGGRPLHGNDRGY 97
>gi|308509716|ref|XP_003117041.1| CRE-RSP-1 protein [Caenorhabditis remanei]
gi|308241955|gb|EFO85907.1| CRE-RSP-1 protein [Caenorhabditis remanei]
Length = 308
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
+ I ++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +G+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 101 NGRRVRVEMSNP 112
G RV ++ S P
Sbjct: 62 GGERVILDYSKP 73
>gi|222617767|gb|EEE53899.1| hypothetical protein OsJ_00434 [Oryza sativa Japonica Group]
Length = 377
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+ED F YG ++ V + F FVEF D RDA++A DGR
Sbjct: 73 LYVGRL--SSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 127
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 128 DFDGSRMIVEFA-----KGVPRG-PGGSREYMG----RGPPPG-SGRCFNCGIDGHWARD 176
Query: 159 CRS 161
C++
Sbjct: 177 CKA 179
>gi|298706217|emb|CBJ29258.1| RNA-binding protein 1 [Ectocarpus siliculosus]
Length = 402
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E YG I N+WVA+NPPGF F +F++R A+D VRG DG ++ + VE++
Sbjct: 21 DLEPKLIKYGTITNLWVAKNPPGFAFCDFQNRAMADDCVRGMDGLKLENLAITVEIARRP 80
Query: 114 KMR 116
K R
Sbjct: 81 KAR 83
>gi|348687956|gb|EGZ27770.1| hypothetical protein PHYSODRAFT_246920 [Phytophthora sojae]
Length = 838
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNVWV--ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I+++ V PP F FV+FED RDAEDA+RG DG + +G R+RVE +N
Sbjct: 546 EVEDIFYKYGRIRDIDVKFPSRPPAFAFVDFEDPRDAEDAIRGRDGYDYDGARLRVEPAN 605
>gi|358059659|dbj|GAA94591.1| hypothetical protein E5Q_01243 [Mixia osmundae IAM 14324]
Length = 294
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 33/192 (17%)
Query: 16 FSSLCQEAEIEDPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP 75
SSL P A + + I S+T ED++D F GP+ V +
Sbjct: 1 MSSLANGGRGAPPADNNALEPVPNKIYIGGLPESTTTEDLQDCFGQIGPVITVELKS--- 57
Query: 76 GFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRA 135
G+GFVEF + A DAV ++ G +++VE+S + R + NG
Sbjct: 58 GYGFVEFGTEQHALDAVSKYNDGHFLGAQIKVEVSKRPRFRQQENGLG------------ 105
Query: 136 RGRPFNPDDKCYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSN 195
C++CG H+AR+C + R+G RP R + S P + R
Sbjct: 106 ----------CFKCGETSHWARECPNVRNGKLIRPPERGYGPPRRYMSPSPPPRHR---- 151
Query: 196 GRSGGDRGYRGS 207
DRGYRGS
Sbjct: 152 ----DDRGYRGS 159
>gi|17535711|ref|NP_496442.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
gi|56749460|sp|Q23121.1|RSP1_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 1;
AltName: Full=CeSRp75; AltName: Full=RNA-binding protein
srp-5
gi|3880429|emb|CAA91395.1| Protein RSP-1, isoform a [Caenorhabditis elegans]
Length = 312
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFD 96
+ + I ++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLN 57
Query: 97 GREINGRRVRVEMSNP 112
G+E+ G RV ++ S P
Sbjct: 58 GKELGGERVILDYSKP 73
>gi|444720822|gb|ELW61591.1| Vascular endothelial zinc finger 1 [Tupaia chinensis]
Length = 399
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|221130501|ref|XP_002159641.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Hydra
magnipapillata]
Length = 265
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 54 DIEDAFSYYGPIKNVWV-ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
DIED F YGPIK + + R P F F+EFED RDA DAV G DG G+R+RV+
Sbjct: 27 DIEDLFDKYGPIKAIDIHNRFDPAFAFLEFEDPRDASDAVYGKDGERFEGQRIRVQF 83
>gi|268531974|ref|XP_002631115.1| C. briggsae CBR-RSP-1 protein [Caenorhabditis briggsae]
Length = 304
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFD 96
+ + I ++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLN 57
Query: 97 GREINGRRVRVEMSNP 112
G+E+ G RV ++ S P
Sbjct: 58 GKELGGDRVILDYSKP 73
>gi|357134837|ref|XP_003569022.1| PREDICTED: uncharacterized protein LOC100826232 [Brachypodium
distachyon]
Length = 335
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 69/124 (55%), Gaps = 16/124 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG I+ V + R+ + F+E+ D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRTRDLEYLFSRYGRIREVELKRD---YAFIEYSDPRDADDAQYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGG-DRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 157
+++G R+ VE + +G G G +R Y G RG P +C+ CG GH+AR
Sbjct: 68 DVDGSRIIVEFA-----KGIPRGPGGSREREYMG----RGPPPG-TGRCFNCGIDGHWAR 117
Query: 158 DCRS 161
DC++
Sbjct: 118 DCKA 121
>gi|281201086|gb|EFA75300.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 305
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV + ST +++E+++D F +G + ++ + G+ FVEF+D + A DA+ +
Sbjct: 70 IYVGRI--STRTSREELQDNFKRFGEVLSMDIK---TGYAFVEFKDEKSANDAINAMNNT 124
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGY-------RGSVRARGRPFNPDDKCYECGG 151
+++G R+ V+ S+ + R RG+ S + G + D KCY C G
Sbjct: 125 DLDGERIIVQKSHGGRKRTSDECYICRGRGHWARSCPRNNSSGSSGGRGSRDIKCYTCNG 184
Query: 152 RGHYARDCRSRRSGG 166
GH AR+CR RR G
Sbjct: 185 YGHIARECRGRRDSG 199
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+
Sbjct: 20 EREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGRDGYNFDGNRLRVEI 79
Query: 110 SN----PQKMRGRSNGRSGGDRG 128
++ P RS SGG G
Sbjct: 80 AHGGRGPPPAVDRSAAESGGRAG 102
>gi|27476067|gb|AAO16998.1| Unknown protein [Oryza sativa Japonica Group]
Length = 389
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 24/129 (18%)
Query: 44 VLCSTSSTKEDIEDAFSYYGP-----------IKNVWVARNPPGFGFVEFEDRRDAEDAV 92
V +T K + DAF Y I+ V + R+ + F+EF D RDA++A
Sbjct: 96 VFYTTREWKLQVGDAFEYLSHDGLLFGNHWCRIREVELKRD---YAFIEFSDPRDADEAR 152
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGR 152
DGR+++G R+ VE + +G G +GG R Y G RG P +C+ CG
Sbjct: 153 YNLDGRDVDGSRILVEFA-----KGVPRGAAGGSREYMG----RGPPPG-TGRCFNCGID 202
Query: 153 GHYARDCRS 161
GH+ARDC++
Sbjct: 203 GHWARDCKA 211
>gi|340504267|gb|EGR30725.1| splicing arginine serine-rich 6, putative [Ichthyophthirius
multifiliis]
Length = 371
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWV-ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGR 103
+C + + D+E+ F YG I+ + + ++ +GF+EFED+RDA+DA+ + E G+
Sbjct: 3 MCLFQANERDLENLFIKYGKIREIKIKSKGANNYGFIEFEDQRDAKDALEECNNLEFKGK 62
Query: 104 RVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
++R+E + + + N G R R + + KCY+CG H +DC
Sbjct: 63 QLRIEFGHGGRRKRLQNCYYCG-RNNHNMKDCRKKYGDGKPKCYKCGSINHKFKDC 117
>gi|392901828|ref|NP_502757.2| Protein Y57G11A.5 [Caenorhabditis elegans]
gi|225878077|emb|CAB16494.2| Protein Y57G11A.5 [Caenorhabditis elegans]
Length = 110
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+++IE FS GPIK++W+A+ PPGF FV F+ A DAV+ +G++I +VEM
Sbjct: 28 ATEKEIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHAFDAVKYLNGKKICDLEAKVEM 87
>gi|242052053|ref|XP_002455172.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|241927147|gb|EES00292.1| hypothetical protein SORBIDRAFT_03g005500 [Sorghum bicolor]
gi|448878302|gb|AGE46114.1| arginine/serine-rich splicing factor RS2Z34 transcript I [Sorghum
bicolor]
Length = 296
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV V S+ + D+ED F YG ++ V + F FVEF D RDA+DA D R
Sbjct: 26 LYVGRV--SSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDPRDADDARYHLDDR 80
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E +G R+ VE + +G G GG R Y G G +C+ CG GH+ARD
Sbjct: 81 EFDGSRLIVEFA-----KGIPRG-PGGSREYMGKGPPPG-----SGRCFNCGMDGHWARD 129
Query: 159 CRS 161
C++
Sbjct: 130 CKA 132
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 15/107 (14%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
+ARYM S+ + S S ED+ F YGPI +V++ R P GF +++FED
Sbjct: 1 MARYMRPPNTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRG---RSNGRS 123
RDAEDA+ D + + GR++ ++ + P +M+ RS GRS
Sbjct: 61 VRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSKERRSPGRS 107
>gi|356574963|ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 264
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 15/82 (18%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDAEDA++ DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIQYRDGYNFDGFRLRVELAH 81
Query: 112 PQKMRGRSNGRSGGDRGYRGSV 133
G RGY SV
Sbjct: 82 -------------GGRGYSSSV 90
>gi|3249109|gb|AAC24092.1| Contains similarity to pre-mRNA splicing factor (SF2), P33 subunit
gb|M72709 from Homo sapiens. ESTs gb|T42588 and
gb|R65514 come from this gene [Arabidopsis thaliana]
Length = 237
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAH 81
>gi|291228498|ref|XP_002734207.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 230
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I ++ + R P F FVEFED+RDAEDAVRG DG + +G R+RVE
Sbjct: 28 KDIEDIFYKYGNILDIDLKNRRGPPFSFVEFEDKRDAEDAVRGRDGYDYDGYRLRVEF 85
>gi|42561847|ref|NP_172386.3| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775270|emb|CAB42557.1| SF2/ASF-like splicing modulator Srp30 [Arabidopsis thaliana]
gi|23297699|gb|AAN13011.1| putative SF2/ASF splicing modulator Srp30 [Arabidopsis thaliana]
gi|332190279|gb|AEE28400.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 268
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M +R+ IYV + K ++ED F YGPI ++ + PPG+ FVEFED RDA
Sbjct: 1 MSSRWNRTIYVGNLPGDI--RKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
+DA+ G DG + +G R+RVE+++
Sbjct: 59 DDAIYGRDGYDFDGCRLRVEIAH 81
>gi|145518856|ref|XP_001445300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412744|emb|CAK77903.1| unnamed protein product [Paramecium tetraurelia]
Length = 454
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 23/110 (20%)
Query: 55 IEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQK 114
I+D F YG IK+V + FV F+ +AEDA++ +G+ ING++++V++ + +K
Sbjct: 25 IKDIFKKYGNIKDVAYK---GSYSFVTFQSESEAEDALKALNGQTINGQKLKVDVVDNRK 81
Query: 115 MRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRS 164
GR G + +D+C++CG GH+AR+C +R S
Sbjct: 82 ------GRRSGPQ--------------ENDECFKCGKGGHWARECPNRSS 111
>gi|79582138|ref|NP_683288.2| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
gi|4775271|emb|CAB42558.1| SF2/ASF-like splicing modulator Srp30, variant 1 [Arabidopsis
thaliana]
gi|332190280|gb|AEE28401.1| splicing factor, arginine/serine-rich 1/9 [Arabidopsis thaliana]
Length = 256
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M +R+ IYV + K ++ED F YGPI ++ + PPG+ FVEFED RDA
Sbjct: 1 MSSRWNRTIYVGNLPGDI--RKCEVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
+DA+ G DG + +G R+RVE+++
Sbjct: 59 DDAIYGRDGYDFDGCRLRVEIAH 81
>gi|291228500|ref|XP_002734208.1| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 244
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I ++ + R P F FVEFED+RDAEDAVRG DG + +G R+RVE
Sbjct: 28 KDIEDIFYKYGNILDIDLKNRRGPPFSFVEFEDKRDAEDAVRGRDGYDYDGYRLRVEF 85
>gi|32563822|ref|NP_871914.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
gi|26985892|emb|CAD59160.1| Protein RSP-1, isoform c [Caenorhabditis elegans]
Length = 150
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
+ I ++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +G+E+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGKEL 61
Query: 101 NGRRVRVEMSNP 112
G RV ++ S P
Sbjct: 62 GGERVILDYSKP 73
>gi|32563820|ref|NP_871913.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
gi|26985891|emb|CAD59159.1| Protein RSP-1, isoform b [Caenorhabditis elegans]
Length = 148
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
++ +++DIE F YG I++V + GFGFVEF+D+RDAEDAV +G+E+ G RV
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLLKN---GFGFVEFDDKRDAEDAVHDLNGKELGGERV 66
Query: 106 RVEMSNP 112
++ S P
Sbjct: 67 ILDYSKP 73
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
I V I S + +DIED F YG + + R +GFV+F+DRRDAEDA++ DG
Sbjct: 5 ITVFIGGLSDRARDKDIEDFFDKYGKVTQI---RLRDRYGFVDFDDRRDAEDAIKDLDGS 61
Query: 99 EINGRRVRVEMSN 111
+ G RVR+E++N
Sbjct: 62 SLCGERVRLELAN 74
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
+ARYM S+ + S S ED+ F YGPI +V++ R P GF +++FED
Sbjct: 1 MARYMRPPNTSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + + GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHSLDRKWVCGRQIEIQFAQGDRKTPNQMKSK 99
>gi|255548616|ref|XP_002515364.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223545308|gb|EEF46813.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 179
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 17/112 (15%)
Query: 51 TKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
T+ D+ED F +G I++VWVAR PPG+ F++F+D+RDA+DA+ DG+ NG RVE+S
Sbjct: 14 TERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDADDAIHELDGK--NG--WRVELS 69
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
+ + G G G G D KCYECG GH+AR+CR R
Sbjct: 70 HNSRGGGGRGGGRGRSGGS-------------DLKCYECGEPGHFARECRLR 108
>gi|297849206|ref|XP_002892484.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
gi|297338326|gb|EFH68743.1| hypothetical protein ARALYDRAFT_470995 [Arabidopsis lyrata subsp.
lyrata]
Length = 265
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGCRLRVEIAH 81
>gi|313222821|emb|CBY41772.1| unnamed protein product [Oikopleura dioica]
Length = 730
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query: 53 EDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
EDIE F YG ++++ + G+GFV+F+D+ DA+DAV+ DG+EI G++VR+E+SN
Sbjct: 182 EDIEKFFKGYGSLRDISL---KGGYGFVQFKDKYDAKDAVQDLDGKEICGQKVRIELSN 237
>gi|325190523|emb|CCA25022.1| premRNAsplicing factor SF2 putative [Albugo laibachii Nc14]
Length = 303
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFD 96
IYV + S + ++ED F +G I+++ + PP + F++FED RDAEDA+ D
Sbjct: 5 IYVGNLPMSIRT--REVEDLFYKHGKIQDIDLKLPLRPPAYAFIDFEDARDAEDAIEARD 62
Query: 97 GREINGRRVRVEMSNPQKMRGRSNGRSGGDRG 128
G + G+R+RVE +NP+ + + R +G
Sbjct: 63 GYKYEGQRLRVERANPKNIEKEKHVRGSRSKG 94
>gi|325186279|emb|CCA20785.1| splicing factor putative [Albugo laibachii Nc14]
Length = 275
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 51 TKEDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ ++E F +G I NV + R PP F F+E+ED RDAEDAV+ G+E++G +RVE
Sbjct: 37 SEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVE 96
Query: 109 MS 110
+S
Sbjct: 97 IS 98
>gi|158822007|gb|ABW80965.1| arginine/serine-rich 3 splicing factor [Ellobius lutescens]
Length = 35
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 30/35 (85%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRR 86
K ++E AF YYGP+++VWVARNPPGF FVEFED R
Sbjct: 1 KTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPR 35
>gi|326933179|ref|XP_003212685.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Meleagris
gallopavo]
Length = 278
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGRE 99
L SS ED+ F YGPI +V+V R P GF +V+FED RDAEDA+ D +
Sbjct: 91 LAERSSQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKW 150
Query: 100 INGRRVRVEMS-----NPQKMRGR 118
I GR++ ++ + P +M+ +
Sbjct: 151 ICGRQIEIQFAQGDRKTPNQMKAK 174
>gi|149390510|gb|ABR25316.1| splicing factor [Oryza sativa Indica Group]
Length = 209
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 68/140 (48%), Gaps = 28/140 (20%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+ED F YG ++ V + F FVEF D RDA++A DGR
Sbjct: 20 LYVGRL--SSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFN--------------- 141
+ +G R+ VE + +G G GG R Y RG GR FN
Sbjct: 75 DFDGSRMIVEFA-----KGVPRG-PGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGD 128
Query: 142 PDDKCYECGGRGHYARDCRS 161
++CY CG RGH RDCR+
Sbjct: 129 WKNRCYRCGDRGHIERDCRN 148
>gi|115434616|ref|NP_001042066.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|54290784|dbj|BAD61423.1| putative splicing factor [Oryza sativa Japonica Group]
gi|113531597|dbj|BAF03980.1| Os01g0155600 [Oryza sativa Japonica Group]
gi|125524487|gb|EAY72601.1| hypothetical protein OsI_00466 [Oryza sativa Indica Group]
gi|215765664|dbj|BAG87361.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 324
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 16/123 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+ED F YG ++ V + F FVEF D RDA++A DGR
Sbjct: 20 LYVGRL--SSRTRTRDLEDLFGRYGRVRYVDMKHE---FAFVEFSDARDADEARYNLDGR 74
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + +G G GG R Y G RG P +C+ CG GH+ARD
Sbjct: 75 DFDGSRMIVEFA-----KGVPRG-PGGSREYMG----RGPPPG-SGRCFNCGIDGHWARD 123
Query: 159 CRS 161
C++
Sbjct: 124 CKA 126
>gi|325189186|emb|CCA23709.1| splicing factor putative [Albugo laibachii Nc14]
Length = 233
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 51 TKEDIEDAFSYYGPIKNVWV--ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ ++E F +G I NV + R PP F F+E+ED RDAEDAV+ G+E++G +RVE
Sbjct: 37 SEPELEKTFGEFGKIVNVILKFPRRPPPFAFIEYEDLRDAEDAVQQMHGKELHGAEIRVE 96
Query: 109 MS 110
+S
Sbjct: 97 IS 98
>gi|357441749|ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 334
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM-- 109
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+
Sbjct: 53 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 112
Query: 110 -----SNPQKMRGRSNGRSGG 125
S+ R +GRSG
Sbjct: 113 GGRGSSSSVDRYSRHSGRSGS 133
>gi|260790117|ref|XP_002590090.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
gi|229275278|gb|EEN46101.1| hypothetical protein BRAFLDRAFT_83361 [Branchiostoma floridae]
Length = 326
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 23/108 (21%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D++D F +G + + +N +GFV ++ +DA DA++ E G R+ VEMS
Sbjct: 34 KKDLQDLFEKFGKVNECDIIKN---YGFVHMDNEQDANDAIKALTNTEWMGTRITVEMS- 89
Query: 112 PQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+S R+ +G RG +CY CG GH++RDC
Sbjct: 90 ------KSKVRTQPGQGSRG-------------ECYRCGKMGHWSRDC 118
>gi|324512727|gb|ADY45260.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 242
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 52 KEDIEDAFSYYGPI--KNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ D+ED F YG I +V +R P F F+EFED RDAEDA+RG DG +++G R+RVEM
Sbjct: 20 QRDLEDLFDKYGRICFIDVKYSRGAP-FAFLEFEDSRDAEDAIRGRDGYDLDGCRIRVEM 78
Query: 110 S 110
+
Sbjct: 79 T 79
>gi|357441755|ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 316
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM-- 109
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+
Sbjct: 53 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 112
Query: 110 -----SNPQKMRGRSNGRSG 124
S+ R +GRSG
Sbjct: 113 GGRGSSSSVDRYSRHSGRSG 132
>gi|313233455|emb|CBY24570.1| unnamed protein product [Oikopleura dioica]
Length = 583
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query: 53 EDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
EDIE F YG ++++ + G+GFV+F+D+ DA+DAV+ DG+EI G++VR+E+SN
Sbjct: 426 EDIEKFFKGYGSLRDISLK---GGYGFVQFKDKYDAKDAVQDLDGKEICGQKVRIELSN 481
>gi|357441751|ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 290
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+++
Sbjct: 53 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 112
>gi|357441753|ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 322
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM-- 109
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+
Sbjct: 53 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 112
Query: 110 -----SNPQKMRGRSNGRSGG 125
S+ R +GRSG
Sbjct: 113 GGRGSSSSVDRYSRHSGRSGS 133
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVR 93
M IY+ + T++D++D F +G I ++ + PP FGF+ F+D RDAE+AVR
Sbjct: 1 MARIYIGNLPMDV--TEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVR 58
Query: 94 GFDGREINGRRVRVEMS 110
DG +++G R+RVE+S
Sbjct: 59 ARDGYDMDGSRLRVEIS 75
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+
Sbjct: 20 EREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGRDGYNFDGNRLRVEI 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|357119205|ref|XP_003561336.1| PREDICTED: uncharacterized protein LOC100827239 [Brachypodium
distachyon]
Length = 314
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 19/211 (9%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDR 85
M + I+V + T K +E+AF +G + + + GFGFV F D
Sbjct: 1 MAGKEESRIFVGGLSFHTDERK--LEEAFRRFGKVVDAQIMLERHTNRHRGFGFVTFSDP 58
Query: 86 RDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGY-RGSVRARGRPFNPDD 144
R E A+ +E++GR + V + P+ + SGGDRG RG R P
Sbjct: 59 RAVESAISEMHTKELDGRTISVNRAEPKMNTDDTRYSSGGDRGADRGDYRGGKGDGPPPG 118
Query: 145 KCYECGGRGHYARDCRSRRSGGSGR--PELCKINGRRVRVEMSNPQKMRGRSNGRSGGDR 202
CY+CG GH+ARDC + G SG+ + GR R S+ R + GG
Sbjct: 119 NCYQCGRAGHWARDCPNPAGGRSGQLSSKFSGGGGRGDRFSGSDRFSDRYMDDRYDGGRY 178
Query: 203 GYRGSVRARGRPFNPDDKCYECGGRGHYARD 233
GYR + R R Y+ GGR YA D
Sbjct: 179 GYRDPIDNRDR--------YD-GGRDRYASD 200
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 174 KINGRRVRVEMSNPQKMRGRSNGRSGGDRGY-RGSVRARGRPFNPDDKCYECGGRGHYAR 232
+++GR + V + P+ + SGGDRG RG R P CY+CG GH+AR
Sbjct: 72 ELDGRTISVNRAEPKMNTDDTRYSSGGDRGADRGDYRGGKGDGPPPGNCYQCGRAGHWAR 131
Query: 233 DC-----------RSRRSGGGGR 244
DC S+ SGGGGR
Sbjct: 132 DCPNPAGGRSGQLSSKFSGGGGR 154
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RYM S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYMRPPXTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|52140012|gb|AAU29333.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
gi|194698470|gb|ACF83319.1| unknown [Zea mays]
gi|413944987|gb|AFW77636.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 276
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+EDI+D F YG I +V + R PP F FVEFED+RDA+DAV G DG ++G R+RVE
Sbjct: 19 QEDIKDVFYKYGKIIHVDLKIGRGPP-FAFVEFEDKRDADDAVYGRDGYTLDGYRLRVEF 77
>gi|356517718|ref|XP_003527533.1| PREDICTED: uncharacterized protein LOC100814914 [Glycine max]
Length = 273
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
+YVS + S T D+ FS +G + V V ++ G FV+F R DA DA
Sbjct: 64 TLYVSNI--DYSLTNSDLHTLFSTFGRVARVTVLKDRHTRLSRGVAFVQFVSRHDAHDAA 121
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGR 152
DG+ +NGR + ++ D G R R R + D+C+ECG +
Sbjct: 122 AQMDGKVLNGRTLAASIA--------------ADNG-RAPEFIRKRVYRDTDRCFECGEQ 166
Query: 153 GHYARDCRSRRSGGSGRPE 171
GH + DC + G RPE
Sbjct: 167 GHLSYDCPRNQLGPRQRPE 185
>gi|51971529|dbj|BAD44429.1| unknown protein [Arabidopsis thaliana]
Length = 290
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+E FS YG +++V + R+ + FV F D RDA+DA DGR
Sbjct: 13 LYVGRL--SSRTRTRDLERLFSRYGRVRDVDMKRD---YAFVVFGDPRDADDARHYLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE S R R D RG GR C+ CG GH+ARD
Sbjct: 68 DFDGSRITVEFS-------RGAPRGSRDFDSRGPPPGAGR-------CFNCGVDGHWARD 113
Query: 159 C 159
C
Sbjct: 114 C 114
>gi|256087165|ref|XP_002579746.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360042833|emb|CCD78243.1| putative arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 279
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D+ S G + +VWVARNPPGF F E+ DAE AVR +G + G R+RVE ++
Sbjct: 23 KDDLVRELSKCGELVDVWVARNPPGFAFAEYVRSSDAEKAVRSLNGVNVCGSRIRVEFAH 82
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 28/124 (22%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPG-FGFVEFEDRRDAEDAVRGF 95
+ +Y+ + T++ D+++ FS YG I+ + + F F+EF++RRDA+DA++
Sbjct: 1 MSLYIGGLTAETNA--RDLDNLFSVYGTIQRNDIKKTSGRCFAFIEFKERRDADDALKAL 58
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHY 155
+G ++ G ++ VE S GG + PD+KC+ C GH+
Sbjct: 59 NGAKLLGSKITVEWS------------KGGGKA-------------PDNKCFTCQQSGHW 93
Query: 156 ARDC 159
A+DC
Sbjct: 94 AKDC 97
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYDFDGYRLRVELAH 81
Query: 112 PQKMRGRSNGR-SGGDRGYRGSVRAR 136
K + S R S G RG V R
Sbjct: 82 GGKAQSYSYDRPSSFSSGRRGGVSRR 107
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M R+ IYV + + ++ED F YG I ++ V PPG+ FVEFED RDA
Sbjct: 1 MSRRWSRTIYVGNLPGDI--REREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+ G DG +G R+RVE ++
Sbjct: 59 EDAIAGRDGYNFDGHRLRVEAAH 81
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Callithrix
jacchus]
Length = 262
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLHPPNTSLFVRNVANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+R D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALRNLDRKWICGRQMEIQFAQGDRKTPNQMKAK 99
>gi|388515137|gb|AFK45630.1| unknown [Medicago truncatula]
Length = 259
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 81
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + +K +ED F YG I +V + PP + FVEFE+ RDA
Sbjct: 1 MSGRFSRTIYVGNLPADIRESK--VEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGSRLRVELAH 81
>gi|52140013|gb|AAU29334.1| ASF/SF2-like pre-mRNA splicing factor SRP31' [Zea mays]
gi|413944989|gb|AFW77638.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 253
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|52140015|gb|AAU29336.1| ASF/SF2-like pre-mRNA splicing factor SRP31''' [Zea mays]
gi|413944988|gb|AFW77637.1| ASF/SF2-like pre-mRNA splicing factor SRP31 [Zea mays]
Length = 264
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED RDAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDARDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|428176969|gb|EKX45851.1| hypothetical protein GUITHDRAFT_108300 [Guillardia theta CCMP2712]
Length = 126
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D++D F YG I + WVAR PPGFGFV F+D RDA DA + DG ++ G RVRVE+
Sbjct: 15 DLQDFFRKYGQINDAWVARKPPGFGFVWFDDDRDARDACQDLDGTDLMGNRVRVEI---- 70
Query: 114 KMRGRSNGRSGGDRGY 129
S GR DRGY
Sbjct: 71 -----STGRRRDDRGY 81
>gi|308510478|ref|XP_003117422.1| CRE-RSP-2 protein [Caenorhabditis remanei]
gi|308242336|gb|EFO86288.1| CRE-RSP-2 protein [Caenorhabditis remanei]
Length = 281
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++ V I +T D+E F YG + +V + +N GFGFV+F+D+RDA+DAV +G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLVDV-IMKN--GFGFVDFQDQRDADDAVHDLNG 57
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+++ G RV +E P++ G + RSGG GYRG
Sbjct: 58 KDLCGERVILEF--PRRKVGYNEERSGG--GYRG 87
>gi|312073828|ref|XP_003139695.1| hypothetical protein LOAG_04110 [Loa loa]
Length = 300
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D++DAF +G I NVW+A PP F FV F+ + DA DA++ + I +++V ++
Sbjct: 169 KDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNNAYIGRNKIKVATAH 228
Query: 112 PQKMRG 117
P + G
Sbjct: 229 PPRKPG 234
>gi|260833614|ref|XP_002611807.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
gi|229297179|gb|EEN67816.1| hypothetical protein BRAFLDRAFT_243385 [Branchiostoma floridae]
Length = 177
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R PP F FVEF+D+RDAEDAVRG DG +G R+RVE
Sbjct: 22 KDIEDIFYKYGNIRHIDLKNKRGPP-FAFVEFDDKRDAEDAVRGRDGYNYDGYRLRVEF 79
>gi|217073712|gb|ACJ85216.1| unknown [Medicago truncatula]
Length = 246
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED RDA+DA+ DG + +G R+ VE+++
Sbjct: 22 EVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDAQDAIYYRDGYDFDGYRLLVELAH 81
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 53 EDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
ED+ F YG +K+V++ R+ P GFGFVEF+D RDAEDA+ D INGR + V
Sbjct: 31 EDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAEDAMYSLDRSTINGREISV 90
Query: 108 EMS 110
S
Sbjct: 91 TFS 93
>gi|179074|gb|AAA35564.1| alternative [Homo sapiens]
gi|119614894|gb|EAW94488.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_c [Homo sapiens]
Length = 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|339245697|ref|XP_003374482.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972269|gb|EFV55952.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 214
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I + TK D+EDAFS +G I +W+A P + F+ ++ R DAE+AV +G I
Sbjct: 76 VHIGDIDDTITKADLEDAFSKFGKISEIWLATYAPFYAFIVYKTREDAEEAVHRLNGSYI 135
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGY 129
+VRV ++ P++ G + RGY
Sbjct: 136 RNCKVRVSLALPRRRYGPRSDWRPPPRGY 164
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 10/84 (11%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+
Sbjct: 20 EREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVEL 79
Query: 110 SN--------PQKMRGRSNGRSGG 125
++ ++ R S+GR GG
Sbjct: 80 AHGGRGQSYQYERPRSYSSGRRGG 103
>gi|351713363|gb|EHB16282.1| Splicing factor, arginine/serine-rich 1 [Heterocephalus glaber]
Length = 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|114108043|gb|AAI23123.1| Sfrs1 protein [Xenopus laevis]
Length = 296
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 62 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 120
>gi|402899743|ref|XP_003912847.1| PREDICTED: serine/arginine-rich splicing factor 1 [Papio anubis]
Length = 375
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 157 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 215
>gi|68035998|gb|AAY84875.1| alternative splicing regulator [Triticum aestivum]
Length = 254
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+IED F YGPI ++ + PP + FVEFED RDA+DA+ G DG + +G ++RVE+++
Sbjct: 22 EIEDLFCKYGPIVDIDLKIPPRPPVYAFVEFEDPRDADDAIYGRDGYDFDGCKLRVELAH 81
Query: 112 PQKMRGRSNGRSGGDRGYRGSVR 134
K S G RG++R
Sbjct: 82 GGKGPSFDRPNSYTSSGRRGALR 104
>gi|118835441|gb|AAI28932.1| Sfrs1 protein [Xenopus laevis]
Length = 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 60 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 118
>gi|405959140|gb|EKC25204.1| Splicing factor, arginine/serine-rich 7 [Crassostrea gigas]
Length = 318
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPP--GFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
K +E+ F +G +K VW+ARNP G+ FV F D + AE+AV+G +G + G +++V++
Sbjct: 25 KYHLEELFERFGLVKTVWIARNPLSRGYAFVTFFDPKHAEEAVKGLNGTALQGSKLKVQL 84
Query: 110 SNPQ--KMRGRSNGRSGGDRGYRGSVRARGR 138
S + K+ R R + R R R
Sbjct: 85 SKNEIVKVENEHKDRDRDPRDHTNQRRHRSR 115
>gi|413944556|gb|AFW77205.1| hypothetical protein ZEAMMB73_752942 [Zea mays]
Length = 282
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S + +D+ED F YG ++NV + R FGFVEF D RDA+DA DGR
Sbjct: 92 LYVGQI--SPYTRTQDLEDIFRKYGRLRNVDMKRE---FGFVEFTDPRDADDARHDLDGR 146
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYA 156
+G + VE + G RG G V G+ + +CY CG GH+A
Sbjct: 147 IFDGSHLIVEFAR------------GAQRG-PGGVPLDGKGPSFPGRCYNCGMDGHWA 191
>gi|82233969|sp|Q5ZML3.3|SRSF1_CHICK RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|53127294|emb|CAG31030.1| hypothetical protein RCJMB04_1l5 [Gallus gallus]
Length = 257
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ + PPG+ F+EFED RDAEDA+RG DG +G R+RVE+
Sbjct: 20 EREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGRDGYNFDGNRLRVEI 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 20/134 (14%)
Query: 43 IVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAEDAVRGFDG 97
I S S+T E ++DAF +G + V + GFGFV F++++ EDA+ G +G
Sbjct: 11 IGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNG 70
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGS------------VRARGRPFNPDDK 145
+++GR + V+ + PQ NG DR RGS RG D
Sbjct: 71 LDLDGRAITVDKAQPQGPGRDRNGDRDYDRD-RGSRYDRGRDFGGGGRAPRGSGGGGD-- 127
Query: 146 CYECGGRGHYARDC 159
CY+CG GH+AR+C
Sbjct: 128 CYKCGKPGHFAREC 141
>gi|448878356|gb|AGE46141.1| arginine/serine-rich splicing factor SR32 transcript II [Sorghum
bicolor]
Length = 322
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED RDAEDA+ G DG +G R+RVE ++
Sbjct: 22 EVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDARDAEDAIAGRDGYNFDGHRLRVEAAH 81
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ + S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRSLNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|256092018|ref|XP_002581797.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
Length = 194
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 30 MMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVA----RNPPGFGFVEFEDR 85
+ ++R IYV + T + DIE+ FS YGPI + + R PP F FVEFED
Sbjct: 3 IKMSRTTHKIYVGNLPPDTKT--RDIENLFSKYGPIAAIDLKAGQRRGPP-FAFVEFEDE 59
Query: 86 RDAEDAVRGFDGREINGRRVRVEM 109
DA DAVRG DG +G +RVE+
Sbjct: 60 LDASDAVRGRDGYNFDGYALRVEL 83
>gi|68035567|gb|AAY84873.1| alternative splicing regulator [Triticum aestivum]
Length = 333
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 16/124 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG I+ V + R+ + F+E+ D RDA++A DGR
Sbjct: 13 LYVGRLSSRTRS--RDLEYLFSKYGRIREVELKRD---YAFIEYSDPRDADEARYNLDGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGG-DRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 157
+++G R+ VE + +G G G +R Y G RG P +C+ CG GH+AR
Sbjct: 68 DVDGSRIIVEFA-----KGVPRGSGGSREREYVG----RGPPPG-TGRCFNCGIDGHWAR 117
Query: 158 DCRS 161
DC++
Sbjct: 118 DCKA 121
>gi|167386187|ref|XP_001737654.1| splicing factor, arginine/serine-rich [Entamoeba dispar SAW760]
gi|165899464|gb|EDR26052.1| splicing factor, arginine/serine-rich, putative [Entamoeba dispar
SAW760]
Length = 199
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN----PPGFGFVEFEDRRDAEDAV 92
L +YV + ST K+ +++AF G IKN VA + GFGFV F D AE AV
Sbjct: 4 LEVYVGNLSLSTD--KDKLKEAFVSVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+G+EI+G V V++S PQ + R + RS Y G
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSSYRHSYHG 100
>gi|395845812|ref|XP_003795615.1| PREDICTED: serine/arginine-rich splicing factor 1 [Otolemur
garnettii]
Length = 312
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 94 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 152
>gi|27503247|gb|AAH42354.1| Sfrs1 protein, partial [Xenopus laevis]
Length = 283
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 49 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 107
>gi|402576825|gb|EJW70782.1| hypothetical protein WUBG_18310 [Wuchereria bancrofti]
Length = 153
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 46 CSTSSTKE-DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREING 102
CSTS K+ D+ED F YG I ++ R+ P F F+EF+D RDA DAV G DG + +G
Sbjct: 27 CSTSDVKQRDLEDIFYKYGRINFIDIKFTRDVP-FAFIEFDDPRDARDAVHGRDGYDFDG 85
Query: 103 RRVRVEMS 110
R+RVE++
Sbjct: 86 CRIRVELT 93
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Query: 43 IVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAEDAVRGFDG 97
+ +T ++D++D FS +G ++ V +P GFGFV FED RDAEDAV+ +
Sbjct: 69 VANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDAEDAVKELNN 128
Query: 98 REINGRRVRVE 108
+E+ GR++RVE
Sbjct: 129 QEVQGRKMRVE 139
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 54 DIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++ED FS YG + ++ + PP F FVEF D RDAEDAVRG DG + G R+RVE++
Sbjct: 25 EVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGYDFYGNRLRVELA 83
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
Query: 42 SIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFD 96
S+ L +S ED+ F YGPI +V+V R P GF +V+FED RDAEDA+ D
Sbjct: 55 SLPLFGSSLGSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLD 114
Query: 97 GREINGRRVRVEMS-----NPQKMRGR 118
+ I GR++ ++ + P +M+ +
Sbjct: 115 RKWICGRQIEIQFAQGDRKTPNQMKAK 141
>gi|417409273|gb|JAA51151.1| Putative splicing factor arginine/serine-rich 1-like protein,
partial [Desmodus rotundus]
Length = 278
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 60 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 118
>gi|393910312|gb|EJD75816.1| hypothetical protein LOAG_17122 [Loa loa]
Length = 190
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D++DAF +G I NVW+A PP F FV F+ + DA DA++ + I +++V ++
Sbjct: 59 KDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADALKEMNNAYIGRNKIKVATAH 118
Query: 112 PQKMRG 117
P + G
Sbjct: 119 PPRKPG 124
>gi|198432543|ref|XP_002131859.1| PREDICTED: similar to splicing factor, arginine/serine-rich 1
[Ciona intestinalis]
Length = 235
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 52 KEDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
++D+ED F YG I++V + R P F FVEFEDRRDAED+V G +G +G ++RVE
Sbjct: 22 EKDVEDLFYKYGSIRHVNLKNRRGPPFAFVEFEDRRDAEDSVHGRNGYNFDGYKLRVEHP 81
Query: 111 NPQKMRGRSNGRSGGDRGYRGSVRARGRP 139
R NG S S RARG P
Sbjct: 82 -------RGNGPSQRPAYGMSSFRARGGP 103
>gi|158293128|ref|XP_314469.4| AGAP010496-PA [Anopheles gambiae str. PEST]
gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anopheles gambiae str. PEST]
Length = 258
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+DI+D F +G + V + R P F FVEFED RDA+DAV+ DG + +G R+RVE
Sbjct: 22 KDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPR 81
Query: 112 ---PQKMRGRSNGRS-----GGDRGYRG 131
P RG G S GGDR RG
Sbjct: 82 GGGPGSYRGSRQGNSDRNSRGGDRNNRG 109
>gi|306966179|ref|NP_001182476.1| splicing factor, arginine/serine-rich 1B [Pan troglodytes]
gi|291405734|ref|XP_002719321.1| PREDICTED: splicing factor, arginine/serine-rich 1 [Oryctolagus
cuniculus]
gi|297272653|ref|XP_001103473.2| PREDICTED: splicing factor, arginine/serine-rich 1-like isoform 1
[Macaca mulatta]
gi|348562139|ref|XP_003466868.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 2
[Cavia porcellus]
gi|119614898|gb|EAW94492.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_g [Homo sapiens]
Length = 253
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|170591729|ref|XP_001900622.1| SF2 [Brugia malayi]
gi|158591774|gb|EDP30377.1| SF2, putative [Brugia malayi]
Length = 277
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 52 KEDIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ D+ED F YG I +V + R P F F+EF+D RDA DA+RG DG E++G R+RVEM
Sbjct: 60 QRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEM 118
Query: 110 S 110
+
Sbjct: 119 T 119
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M R+ IYV + + ++ED F YG I ++ V PPG+ FVEFED RDA
Sbjct: 1 MSRRWSRTIYVGNLPGDI--REREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
E+A+ G DG +G R+RVE ++
Sbjct: 59 EEAIAGRDGYNFDGHRLRVEAAH 81
>gi|402590530|gb|EJW84460.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 298
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D++DAF +G I NVW+A PP F FV F+ + DA DA++ + I +++V ++
Sbjct: 167 KDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNNAYIGRNKIKVATAH 226
Query: 112 PQKMRG 117
P + G
Sbjct: 227 PPRKPG 232
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVE-----MSNPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDLKTPNQMKAK 99
>gi|328767259|gb|EGF77309.1| hypothetical protein BATDEDRAFT_32353 [Batrachochytrium
dendrobatidis JAM81]
Length = 179
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 29/135 (21%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-GFGFVEFEDRRDAEDAVRGFD 96
V+++ V S+ D+ED F YG I V FGFVE+ED+RDAE+AV+
Sbjct: 1 VLFIGRVPEDARSS--DLEDIFRKYGKIIRCDVKHGASVSFGFVEYEDKRDAEEAVKAGQ 58
Query: 97 GREI--NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGH 154
E NG ++ VE + ++ GR GG+R D C++CG GH
Sbjct: 59 ETEFEFNGAKMYVEWA-------KAGGRRGGER---------------SDGCFKCGETGH 96
Query: 155 YARDCRSRRSGGSGR 169
+AR+C + SGG GR
Sbjct: 97 WARECPN--SGGGGR 109
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RYM S+ + S S ED+ F YGPI +V++ +R P GF +++FED
Sbjct: 1 MSRYMRPPNSSLFVRNISDESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS 110
RDAEDA+ D + + GR++ ++ +
Sbjct: 61 VRDAEDALHNLDRKWVCGRQIEIQFA 86
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M R+ IYV + + ++ED F YG I ++ V PPG+ FVEFED RDA
Sbjct: 1 MSRRWSRTIYVGNLPGDI--REREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
E+A+ G DG +G R+RVE ++
Sbjct: 59 EEAIAGRDGYNFDGHRLRVEAAH 81
>gi|410966510|ref|XP_003989775.1| PREDICTED: serine/arginine-rich splicing factor 10 [Felis catus]
Length = 191
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 17/94 (18%)
Query: 42 SIVLCSTS-------STKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAE 89
S++LC +S ED+ F YGPI +V+V R P GF +V+FED RDAE
Sbjct: 24 SLLLCDSSPGYPNPEKRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAE 83
Query: 90 DAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
DA+ D + I GR++ ++ + P +M+ +
Sbjct: 84 DALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 117
>gi|148669917|gb|EDL01864.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_b
[Mus musculus]
Length = 193
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|60811245|gb|AAX36166.1| splicing factor arginine/serine-rich 1 [synthetic construct]
Length = 249
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|334322457|ref|XP_003340247.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Monodelphis
domestica]
gi|395531888|ref|XP_003768005.1| PREDICTED: serine/arginine-rich splicing factor 1 [Sarcophilus
harrisii]
Length = 249
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|224109842|ref|XP_002315330.1| predicted protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPI--KNVWVARN---PPGFGFVEFEDRRDAEDAVRGF 95
+ + S T+ +E+AF +G I V + R+ P GFGF+ F DRR +DA+R
Sbjct: 9 IFVGGLSWDITERQLENAFDRFGKIVESQVMLERDTGRPRGFGFITFADRRAMDDAIREM 68
Query: 96 DGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARG--------RPFNPDDKCY 147
GR+ R + V + P+ G D GYRG RP D+C+
Sbjct: 69 HGRDFGDRVISVNKAQPKI------GGDDSDHGYRGGYSTGSRGGYGGGDRPAGQ-DECF 121
Query: 148 ECGGRGHYARDCRS 161
+CG GH+ARDC S
Sbjct: 122 KCGRSGHWARDCPS 135
>gi|354472029|ref|XP_003498243.1| PREDICTED: serine/arginine-rich splicing factor 1 [Cricetulus
griseus]
Length = 201
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|166091440|ref|NP_001107213.1| serine/arginine-rich splicing factor 1 [Gallus gallus]
Length = 248
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|149053805|gb|EDM05622.1| rCG34610, isoform CRA_a [Rattus norvegicus]
Length = 214
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) variant [Homo sapiens]
Length = 233
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 62 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 120
>gi|388500622|gb|AFK38377.1| unknown [Lotus japonicus]
Length = 174
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F +GPI ++ + PPG+ FV+FED RDAEDA+ DG + +G R+RVE+++
Sbjct: 22 EVEDIFYKFGPIVDIDLKIPPRPPGYAFVQFEDARDAEDAIYYRDGYDFDGFRLRVELAH 81
>gi|291407441|ref|XP_002719942.1| PREDICTED: RNA binding motif protein 3 [Oryctolagus cuniculus]
Length = 155
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGR 103
++ ++ +ED FS +GPI V V ++ GFGF+ F + A DA+R +G ++GR
Sbjct: 16 NTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGR 75
Query: 104 RVRVEMSNPQKM-----------RGRSNGRSGGDRGYRGSVRARGRP 139
++RV+ + RGRS R GGD+GY GS R RP
Sbjct: 76 QIRVDHAGKSARGTRGGAFGAHGRGRSYSRGGGDQGY-GSSRYDSRP 121
>gi|417397107|gb|JAA45587.1| Putative serine/arginine-rich splicing factor 1 isoform 2 [Desmodus
rotundus]
Length = 207
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|55742372|ref|NP_001006919.1| serine/arginine-rich splicing factor 1 [Xenopus (Silurana)
tropicalis]
gi|92058727|sp|Q6DII2.1|SRSF1_XENTR RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|49523075|gb|AAH75558.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Xenopus (Silurana)
tropicalis]
Length = 267
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|426236979|ref|XP_004023550.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 1 [Ovis aries]
Length = 190
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRXGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|197099026|ref|NP_001126337.1| serine/arginine-rich splicing factor 1 [Pongo abelii]
gi|68724975|sp|Q5R7H2.3|SRSF1_PONAB RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|55731147|emb|CAH92288.1| hypothetical protein [Pongo abelii]
Length = 248
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|5902076|ref|NP_008855.1| serine/arginine-rich splicing factor 1 isoform 1 [Homo sapiens]
gi|34328400|ref|NP_775550.2| serine/arginine-rich splicing factor 1 isoform 1 [Mus musculus]
gi|83921643|ref|NP_001033096.1| serine/arginine-rich splicing factor 1 [Sus scrofa]
gi|115497078|ref|NP_001069862.1| serine/arginine-rich splicing factor 1 [Bos taurus]
gi|157818019|ref|NP_001103022.1| splicing factor, arginine/serine-rich 1B [Rattus norvegicus]
gi|306966181|ref|NP_001182477.1| splicing factor, arginine/serine-rich 1 [Equus caballus]
gi|306966183|ref|NP_001182478.1| splicing factor, arginine/serine-rich 1 [Macaca mulatta]
gi|73966540|ref|XP_866729.1| PREDICTED: serine/arginine-rich splicing factor 1 isoform 2 [Canis
lupus familiaris]
gi|296202380|ref|XP_002748436.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Callithrix jacchus]
gi|332246407|ref|XP_003272345.1| PREDICTED: serine/arginine-rich splicing factor 1 [Nomascus
leucogenys]
gi|344285799|ref|XP_003414647.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Loxodonta
africana]
gi|397493084|ref|XP_003817443.1| PREDICTED: serine/arginine-rich splicing factor 1 [Pan paniscus]
gi|403279712|ref|XP_003931390.1| PREDICTED: serine/arginine-rich splicing factor 1 [Saimiri
boliviensis boliviensis]
gi|410980663|ref|XP_003996696.1| PREDICTED: serine/arginine-rich splicing factor 1 [Felis catus]
gi|426347344|ref|XP_004041313.1| PREDICTED: serine/arginine-rich splicing factor 1 [Gorilla gorilla
gorilla]
gi|730773|sp|Q07955.2|SRSF1_HUMAN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Alternative-splicing factor 1; Short=ASF-1;
AltName: Full=Splicing factor, arginine/serine-rich 1;
AltName: Full=pre-mRNA-splicing factor SF2, P33 subunit
gi|68725069|sp|Q6PDM2.3|SRSF1_MOUSE RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=ASF/SF2; AltName: Full=Pre-mRNA-splicing factor
SRp30a; AltName: Full=Splicing factor,
arginine/serine-rich 1
gi|114152157|sp|Q3YLA6.3|SRSF1_PIG RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|122145605|sp|Q0VCY7.1|SRSF1_BOVIN RecName: Full=Serine/arginine-rich splicing factor 1; AltName:
Full=Splicing factor, arginine/serine-rich 1
gi|179075|gb|AAA35565.1| alternative [Homo sapiens]
gi|338047|gb|AAA03476.1| SF2p33 [Homo sapiens]
gi|16307434|gb|AAH10264.1| Splicing factor, arginine/serine-rich 1 [Homo sapiens]
gi|21104372|dbj|BAB93456.1| OK/SW-cl.3 [Homo sapiens]
gi|28386236|gb|AAH46773.1| Sfrs1 protein [Mus musculus]
gi|35192949|gb|AAH58627.1| Splicing factor, arginine/serine-rich 1 (ASF/SF2) [Mus musculus]
gi|61364743|gb|AAX42596.1| splicing factor arginine/serine-rich 1 [synthetic construct]
gi|73810229|gb|AAZ86088.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|73810231|gb|AAZ86089.1| splicing factor arginine/serine-rich 1 [Sus scrofa]
gi|74151692|dbj|BAE29641.1| unnamed protein product [Mus musculus]
gi|111306978|gb|AAI19931.1| Splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|119614891|gb|EAW94485.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|119614892|gb|EAW94486.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_a [Homo sapiens]
gi|149053807|gb|EDM05624.1| rCG34610, isoform CRA_c [Rattus norvegicus]
gi|189053478|dbj|BAG35644.1| unnamed protein product [Homo sapiens]
gi|296477057|tpg|DAA19172.1| TPA: splicing factor, arginine/serine-rich 1 [Bos taurus]
gi|336088097|dbj|BAK39908.1| splicing factor, arginine/serine-rich 1, transcript variant 1
[Cricetulus griseus]
gi|344243483|gb|EGV99586.1| Splicing factor, arginine/serine-rich 1 [Cricetulus griseus]
gi|380784743|gb|AFE64247.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|383420721|gb|AFH33574.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|384941916|gb|AFI34563.1| serine/arginine-rich splicing factor 1 isoform 1 [Macaca mulatta]
gi|410224700|gb|JAA09569.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410263644|gb|JAA19788.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308964|gb|JAA33082.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351427|gb|JAA42317.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351431|gb|JAA42319.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|431890828|gb|ELK01707.1| Splicing factor, arginine/serine-rich 1 [Pteropus alecto]
Length = 248
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|336088099|dbj|BAK39909.1| splicing factor, arginine/serine-rich 1, transcript variant 2
[Cricetulus griseus]
Length = 201
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|26383576|dbj|BAC25546.1| unnamed protein product [Mus musculus]
Length = 248
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|118582271|ref|NP_001071635.1| serine/arginine-rich splicing factor 1 isoform 2 [Mus musculus]
gi|26347437|dbj|BAC37367.1| unnamed protein product [Mus musculus]
Length = 201
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 52 KEDIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +I+D F YG I ++ + PPG+ F+EF+D RDAEDA++ DG +G R+RVE
Sbjct: 19 ESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGYVFDGHRLRVEF 78
Query: 110 SNPQKMRGRSNGRSGGDR 127
++ GR + GGDR
Sbjct: 79 AHSG---GRGHPSYGGDR 93
>gi|147774947|emb|CAN60012.1| hypothetical protein VITISV_036556 [Vitis vinifera]
Length = 306
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
L S + T+ D+E FS YG +++V + + F FVEF D RDA+DA +GR+ +G R
Sbjct: 18 LSSRTRTR-DLESLFSRYGRVRDVDMKHD---FAFVEFSDPRDADDARYNLNGRDFDGSR 73
Query: 105 VRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
+ VE + K R + RG GR C+ CG GH+ARDC++
Sbjct: 74 IIVEFA---KGGPRGGSGGSREYLGRGPPPGSGR-------CFNCGIDGHWARDCKA 120
>gi|148669918|gb|EDL01865.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_c
[Mus musculus]
Length = 212
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|350646485|emb|CCD58884.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 207
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 32 IARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV---ARNPPGFGFVEFEDRRDA 88
++R IYV + T + DIE+ FS YGPI + + R P F FVEFED DA
Sbjct: 1 MSRTTHKIYVGNLPPDTKT--RDIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDA 58
Query: 89 EDAVRGFDGREINGRRVRVEM 109
DAVRG DG +G +RVE+
Sbjct: 59 SDAVRGRDGYNFDGYALRVEL 79
>gi|170584455|ref|XP_001897015.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595605|gb|EDP34147.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 304
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 52 KEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
K+D++DAF +G I NVW+A PP F FV F+ + DA DA++ + I +++V ++
Sbjct: 163 KDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNNAYIGRNKIKVATAH 222
Query: 112 PQKMRG 117
P + G
Sbjct: 223 PPRKPG 228
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|355568562|gb|EHH24843.1| hypothetical protein EGK_08569 [Macaca mulatta]
Length = 292
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYYGYRLRVEF 88
>gi|414877279|tpg|DAA54410.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 272
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 25 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 84
>gi|226504020|ref|NP_001150424.1| pre-mRNA-splicing factor SF2 [Zea mays]
gi|195639150|gb|ACG39043.1| pre-mRNA-splicing factor SF2 [Zea mays]
Length = 263
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 25 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 84
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 18/145 (12%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKN--VWVARNPP---GFGFVEFEDR 85
M A+ I+V + S T+ D+E AFS +G I + + + R+ GFGF+ F DR
Sbjct: 1 MAAKEGSRIFVGGL--SPEVTERDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADR 58
Query: 86 RDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGS---------VRAR 136
R ++++R GR+ R + V + P+ GR +G S G RG R S
Sbjct: 59 RAMDESIREMHGRDFGDRVISVNRAEPKL--GRDDGESHGSRGGRDSGYSVTGKGSFGGG 116
Query: 137 GRPFNPDDKCYECGGRGHYARDCRS 161
G +D+C++CG GH+ARDC S
Sbjct: 117 GGGRVAEDECFKCGRVGHWARDCPS 141
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Splicing factor SRp38; AltName:
Full=Splicing factor, arginine/serine-rich 13A; AltName:
Full=TLS-associated protein with Ser-Arg repeats;
Short=TASR; Short=TLS-associated protein with SR
repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich 13A;
AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated serine-arginine
protein; Short=TLS-associated SR protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|391337692|ref|XP_003743199.1| PREDICTED: uncharacterized protein LOC100907227 [Metaseiulus
occidentalis]
Length = 256
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAEDAV 92
++ + + + +T ED++ F +G + +V++ RNP GF FV F DRRDAE+A+
Sbjct: 73 MVSLKVDNLTYRTTVEDLKRVFRKHGDVGDVYIPRNPRNNESRGFAFVRFFDRRDAEEAM 132
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGD 126
DG ++GR +R+ M+ R GRSG D
Sbjct: 133 DALDGYRLDGRELRIAMAK----YARPGGRSGRD 162
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|224123814|ref|XP_002330215.1| predicted protein [Populus trichocarpa]
gi|222871671|gb|EEF08802.1| predicted protein [Populus trichocarpa]
Length = 226
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YGPI ++ + PPG+ FVEFED DA+ A+RG DG + R+RVE+++
Sbjct: 21 EVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDAHDAKYAIRGLDGYNFDACRLRVELAH 80
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|312074323|ref|XP_003139919.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|307764921|gb|EFO24155.1| arginine/serine-rich splicing factor 1 [Loa loa]
gi|393908262|gb|EJD74982.1| arginine/serine-rich splicing factor 1, variant 1 [Loa loa]
gi|393908263|gb|EJD74983.1| arginine/serine-rich splicing factor 1, variant 2 [Loa loa]
gi|393908264|gb|EJD74984.1| arginine/serine-rich splicing factor 1, variant 3 [Loa loa]
gi|393908265|gb|EJD74985.1| arginine/serine-rich splicing factor 1, variant 4 [Loa loa]
gi|402591888|gb|EJW85817.1| hypothetical protein WUBG_03274 [Wuchereria bancrofti]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 52 KEDIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ D+ED F YG I +V + R P F F+EF+D RDA DA+RG DG E++G R+RVEM
Sbjct: 20 QRDLEDLFYKYGHINFIDVKLTRGAP-FAFIEFDDPRDARDAIRGRDGYELDGCRIRVEM 78
Query: 110 S 110
+
Sbjct: 79 T 79
>gi|118582269|ref|NP_001071634.1| serine/arginine-rich splicing factor 1 isoform 2 [Homo sapiens]
gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens]
gi|119614895|gb|EAW94489.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_d [Homo sapiens]
gi|168277706|dbj|BAG10831.1| splicing factor, arginine/serine-rich 1 [synthetic construct]
gi|410263646|gb|JAA19789.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410308966|gb|JAA33083.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
gi|410351429|gb|JAA42318.1| serine/arginine-rich splicing factor 1 [Pan troglodytes]
Length = 201
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|119614896|gb|EAW94490.1| splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor), isoform CRA_e [Homo sapiens]
Length = 142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|348562137|ref|XP_003466867.1| PREDICTED: serine/arginine-rich splicing factor 1-like isoform 1
[Cavia porcellus]
gi|380788319|gb|AFE66035.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|383420723|gb|AFH33575.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
gi|384941914|gb|AFI34562.1| serine/arginine-rich splicing factor 1 isoform 2 [Macaca mulatta]
Length = 201
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|414877278|tpg|DAA54409.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 254
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 25 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 84
>gi|448878368|gb|AGE46147.1| arginine/serine-rich splicing factor SR30 transcript VI [Sorghum
bicolor]
Length = 237
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED DAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|313241655|emb|CBY33880.1| unnamed protein product [Oikopleura dioica]
Length = 247
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+ F +G IK++ + PG+GFV FEDRRDAE+A R DG+ + G +V VEM+
Sbjct: 3 DVEEFFKGFGHIKSINLK---PGYGFVVFEDRRDAEEAARDLDGKRMCGEKVDVEMAKGP 59
Query: 114 KMRGRSNGRSGGDR 127
+ R GDR
Sbjct: 60 GNKSRKEYSRSGDR 73
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 32 IARYMLVIYVSIVLCSTSST--KEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGRSNGRS 123
RDAEDA+ D + I GR++ ++ + P +M+ + GRS
Sbjct: 61 VRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKE-GRS 103
>gi|116788860|gb|ABK25029.1| unknown [Picea sitchensis]
Length = 316
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+ED F+ YG +++V + + F F+EF D RDA++A +GR
Sbjct: 13 LYVGRL--SSRTRTRDLEDLFNRYGRVRDVDLKHD---FAFIEFSDPRDADEARYYLNGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DLDGSRIVVEF----ARGGPRGAAGGRTREYLG----RGPPPG-SGRCFNCGNDGHWARD 118
Query: 159 CRS 161
C++
Sbjct: 119 CKA 121
>gi|388495254|gb|AFK35693.1| unknown [Lotus japonicus]
Length = 300
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 15/126 (11%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + T S D+E FS YG +++V + R+ + FVEF D RDA+DA DGR
Sbjct: 13 LYVGRLSSRTRS--RDLERVFSRYGRVRDVDMKRD---YAFVEFSDPRDADDARYNLDGR 67
Query: 99 EINGRRVRVEMSN--PQKMRGRSNGRSGGDRGY-RGSVRARGRPFNPDDKCYECGGRGHY 155
+++G R+ VE + P+ R GR RG GR C+ CG GH+
Sbjct: 68 DVDGSRLIVEFAKGVPRGSREGGGGRDRDREYMGRGPPPGSGR-------CFNCGIDGHW 120
Query: 156 ARDCRS 161
ARDC++
Sbjct: 121 ARDCKA 126
>gi|348518702|ref|XP_003446870.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 243
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDVEDVFYKYGIIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|194696448|gb|ACF82308.1| unknown [Zea mays]
gi|414877280|tpg|DAA54411.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 263
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 25 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 84
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)
Query: 32 IARYMLVIYVSIVLCSTSST--KEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMSN-----PQKMRGRSNGRS 123
RDAEDA+ D + I GR++ ++ + P +M+ + GRS
Sbjct: 61 VRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPNQMKAKE-GRS 103
>gi|218196647|gb|EEC79074.1| hypothetical protein OsI_19658 [Oryza sativa Indica Group]
Length = 328
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G +G + +G R+RVE+++
Sbjct: 45 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRNGYDFDGHRLRVELAH 104
>gi|116791032|gb|ABK25831.1| unknown [Picea sitchensis]
gi|224284468|gb|ACN39968.1| unknown [Picea sitchensis]
Length = 316
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + S+ + D+ED F+ YG +++V + + F F+EF D RDA++A +GR
Sbjct: 13 LYVGRL--SSRTRTRDLEDLFNRYGRVRDVDLKHD---FAFIEFSDPRDADEARYYLNGR 67
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+++G R+ VE G G R Y G RG P +C+ CG GH+ARD
Sbjct: 68 DLDGSRIVVEF----ARGGPRGAAGGRTREYLG----RGPPPG-SGRCFNCGNDGHWARD 118
Query: 159 CRS 161
C++
Sbjct: 119 CKA 121
>gi|15982739|gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gi|19699180|gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
+ +++ + DAF YG + V + GFGF+ F++++ ++A+ +G +++
Sbjct: 15 AWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAAMNGMDLD 74
Query: 102 GRRVRVEMSNP-QKMRGRSN-GRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
GR + V+ + P Q GR N G G DRGY D C++CG GH+AR+C
Sbjct: 75 GRTITVDKAQPHQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGGD-CFKCGKPGHFAREC 133
Query: 160 RSRRS 164
S S
Sbjct: 134 PSESS 138
>gi|402583204|gb|EJW77148.1| hypothetical protein WUBG_11940 [Wuchereria bancrofti]
Length = 146
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+AFS +G + VWVA PP F FV F+++ DA +A+ + I RVRV ++ P
Sbjct: 61 DLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTYIRNCRVRVSVALP- 119
Query: 114 KMRGRSNGRSGGDRG 128
++R R GG G
Sbjct: 120 RVRAHDRYRFGGGYG 134
>gi|52140009|gb|AAU29331.1| ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
gi|414877275|tpg|DAA54406.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 1 [Zea
mays]
gi|414877276|tpg|DAA54407.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 isoform 2 [Zea
mays]
Length = 260
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 81
>gi|448878366|gb|AGE46146.1| arginine/serine-rich splicing factor SR30 transcript V [Sorghum
bicolor]
Length = 278
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED DAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 17/107 (15%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGR 103
++ ++ +ED FS +GPI V V ++ GFGF+ F + A DA+R +G ++GR
Sbjct: 16 NTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAMNGESLDGR 75
Query: 104 RVRVEMSNPQKM-----------RGRSNGRSGGDRGYRGSVRARGRP 139
++RV+ + RGRS R GGD+GY GS R RP
Sbjct: 76 QIRVDHAGKSARGTRGGAFGAHGRGRSYSRGGGDQGY-GSSRYDSRP 121
>gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio rerio]
Length = 188
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 29 KDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
>gi|45433540|ref|NP_956887.2| serine/arginine-rich splicing factor 1B [Danio rerio]
gi|71162369|sp|Q6NYA0.1|SRS1B_DANRE RecName: Full=Serine/arginine-rich splicing factor 1B; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1B
gi|44890669|gb|AAH66682.1| Splicing factor, arginine/serine-rich 1 (splicing factor 2,
alternate splicing factor) [Danio rerio]
Length = 245
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 29 KDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
>gi|148669916|gb|EDL01863.1| splicing factor, arginine/serine-rich 1 (ASF/SF2), isoform CRA_a
[Mus musculus]
gi|149053806|gb|EDM05623.1| rCG34610, isoform CRA_b [Rattus norvegicus]
Length = 168
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFP 89
>gi|145533360|ref|XP_001452430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420118|emb|CAK85033.1| unnamed protein product [Paramecium tetraurelia]
Length = 189
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 23/121 (19%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
++V+ S S +DI++ F YG IK+V + FV F + ++A+DA++ +G+
Sbjct: 9 LFVAGYSRSKVSGDKDIKEIFKKYGTIKDVAYK---GSYSFVTFSNEQEAQDALKATNGQ 65
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
NG++++V++ + +K GR G N +DKC++C GH+AR+
Sbjct: 66 TYNGQKLKVDVVDNKK--GRKTGP------------------NDEDKCFKCSKGGHWARN 105
Query: 159 C 159
C
Sbjct: 106 C 106
>gi|15228279|ref|NP_187651.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
gi|12322795|gb|AAG51392.1|AC011560_24 hypothetical protein; 114721-113936 [Arabidopsis thaliana]
gi|54261729|gb|AAV31168.1| At3g10400 [Arabidopsis thaliana]
gi|61656137|gb|AAX49371.1| At3g10400 [Arabidopsis thaliana]
gi|332641379|gb|AEE74900.1| small nuclear ribonucleoprotein 31 kDa protein [Arabidopsis
thaliana]
Length = 261
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAV 92
+YVS + S T DI FS +G + V V R G FV + R DA A
Sbjct: 58 TLYVSNL--DFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 115
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGR 152
R D + +NGR++ V + D G R S + R + +CYECG
Sbjct: 116 RSMDAKILNGRKLTVSI--------------AADNG-RASEFIKKRVYKDKSRCYECGDE 160
Query: 153 GHYARDCRSRRSGGSGRPELCKINGRR 179
GH + +C + G RP K GRR
Sbjct: 161 GHLSYECPKNQLGPRERPPPPKKRGRR 187
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 52 KEDIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +I+D F YG I ++ + PPG+ F+EF+D RDAEDA++ DG +G R+RVE
Sbjct: 19 ESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKARDGYVFDGHRLRVEF 78
Query: 110 SNPQKMRGRSNGRSGGDR 127
++ GR + GGDR
Sbjct: 79 AHSG---GRGHPSYGGDR 93
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|18406831|ref|NP_564759.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2462758|gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gi|26983818|gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
gi|62321068|dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 46 CSTSSTKEDIEDAFSYYGPIK--NVWVARN---PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S T+ +E F YG I + V R+ P GFGF+ F DRR A+DA++ GRE+
Sbjct: 19 LSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIKHMHGREL 78
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
+ + V + P K+ G + GY S R +G +D+C++C GH+ARDC
Sbjct: 79 GNKVISVNKAEP-KVGGEDVDQLKKGGGY--SSRGKG----TEDECFKCRRPGHWARDCP 131
Query: 161 S 161
S
Sbjct: 132 S 132
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|52140007|gb|AAU29330.1| ASF/SF2-like pre-mRNA splicing factor SRP32'' [Zea mays]
Length = 150
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M R+ IYV + + ++ED F YG I ++ V PPG+ FVEFED RDA
Sbjct: 1 MSRRWSRTIYVGNLPGDI--REREVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
E+A+ G DG +G R+RVE ++
Sbjct: 59 EEAIAGRDGYNFDGHRLRVEAAH 81
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKN--VWVARNPP---GFGFVEFEDR 85
M A+ I+V + S T D+E AFS +G I + + + R+ GFGF+ F DR
Sbjct: 1 MAAKEGSRIFVGGL--SPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADR 58
Query: 86 RDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGS-----------VR 134
R ++++R GR+ R + V + P+ GR +G S G RG R S
Sbjct: 59 RAMDESIREMHGRDFGDRVISVNRAEPKL--GRDDGESHGSRGGRDSGYSIAGKGSFGGG 116
Query: 135 ARGRPFNPDDKCYECGGRGHYARDCRS 161
G +D+C++CG GH+ARDC S
Sbjct: 117 GGGGGRVGEDECFKCGRVGHWARDCPS 143
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS 110
RDAEDA+ D + I GR++ ++ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFA 86
>gi|448878370|gb|AGE46148.1| arginine/serine-rich splicing factor SR27 transcript I [Sorghum
bicolor]
Length = 230
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 81
>gi|390337101|ref|XP_800412.2| PREDICTED: serine/arginine-rich splicing factor 12-like
[Strongylocentrotus purpuratus]
Length = 205
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 10/87 (11%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGRE 99
L S ED+ + F YGPI ++++ R P GF +V+F+D RDAEDA+ D
Sbjct: 19 LPDDVSRAEDMRNLFGKYGPISDIYIPLDYYTREPRGFAYVQFDDIRDAEDAMYALDRYR 78
Query: 100 INGRRVRVEMS-----NPQKMRGRSNG 121
GR + ++ + P +MRG+ G
Sbjct: 79 FYGRELEIQYAEGDRKTPTQMRGKERG 105
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Oreochromis
niloticus]
Length = 293
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S S+ ++D+E F YG I+++ + R GFGFVEF+D RDAEDAV DG+E+ RV
Sbjct: 11 LSPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNERV 67
Query: 106 RVE 108
+E
Sbjct: 68 TIE 70
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 12 LLLCFSSLCQEAEIEDPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVA 71
+ LCF + I V+ + V I S + + D+E F YG ++ + +
Sbjct: 1 MQLCFCLTSKSCRILFVVLNYTEITMGTRVYIGRLSYQTRERDVERFFRGYGRLREINLK 60
Query: 72 RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN-PQKMRGRSNGRS--GGDR 127
GFGFVEFED RD++DAV +G+E+ G RV +E + P + R +G S GGDR
Sbjct: 61 N---GFGFVEFEDPRDSDDAVYELNGKELCGERVTIEHARGPVRRDYRDSGYSNRGGDR 116
>gi|224032703|gb|ACN35427.1| unknown [Zea mays]
gi|414877277|tpg|DAA54408.1| TPA: hypothetical protein ZEAMMB73_543160 [Zea mays]
Length = 234
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 81
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVR 93
I+V + T K ++DAF +G + +V + GFGFV FEDRR + A++
Sbjct: 9 IFVGGLSWQTDERK--LQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRAVDSAIK 66
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G+E++GR + V + P+ + S G RG R P CYECG G
Sbjct: 67 EMRGQELDGRTISVNKAEPKMNTDDTRFDS---GGGRGEYRGGRGDGPPPGNCYECGRPG 123
Query: 154 HYARDCRSRRSGGSGR-PELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARG 212
H+ RDC S G SGR P GR R S+ R + GG GYR V AR
Sbjct: 124 HWVRDCPSAAGGRSGRFPSKFSGGGRGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDAR- 182
Query: 213 RPFNPDDKCYECGGRGHYARD 233
DK GGR YA D
Sbjct: 183 ------DKY--GGGRDRYAND 195
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+T ED++ F YG + +V++ R+P GF FV F D+RD EDA+ DG ++GR
Sbjct: 25 TTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDALDGYMMDGRE 84
Query: 105 VRVEMS 110
+RV+M+
Sbjct: 85 LRVQMA 90
>gi|341888855|gb|EGT44790.1| CBN-RSP-2 protein [Caenorhabditis brenneri]
gi|341896980|gb|EGT52915.1| hypothetical protein CAEBREN_32319 [Caenorhabditis brenneri]
Length = 283
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++ V I +T D+E F YG + +V + +N GFGFV+F+D+RDA+DAV +G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLVDV-IMKN--GFGFVDFQDQRDADDAVHDLNG 57
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+++ G RV +E P++ G + RSG GYRG
Sbjct: 58 KDLCGERVILEF--PRRKVGYNEERSGS--GYRG 87
>gi|414877281|tpg|DAA54412.1| TPA: ASF/SF2-like pre-mRNA splicing factor SRP30 [Zea mays]
Length = 244
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+
Sbjct: 23 EREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVEL 82
Query: 110 SN 111
++
Sbjct: 83 AH 84
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2 variant
[Homo sapiens]
Length = 262
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS 110
RDAEDA+ D + I GR++ ++ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFA 86
>gi|268561908|ref|XP_002646556.1| Hypothetical protein CBG20414 [Caenorhabditis briggsae]
Length = 308
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 52 KEDIEDAFSYYGPIKNVWV--ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++++ FS YG I V V R FGFV+F D RDA+DAVRG DG + +G+R+RVE+
Sbjct: 20 EKELDSLFSKYGRINKVDVKSGRGGAAFGFVQFSDSRDADDAVRGRDGYDFDGKRIRVEL 79
Query: 110 SNPQKMRGRSNG--RSGGDRGY 129
+ RG R G DRGY
Sbjct: 80 TRGSGPRGPGGRPVRDGYDRGY 101
>gi|108708089|gb|ABF95884.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
gi|215692748|dbj|BAG88168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192809|gb|EEC75236.1| hypothetical protein OsI_11526 [Oryza sativa Indica Group]
gi|222624911|gb|EEE59043.1| hypothetical protein OsJ_10806 [Oryza sativa Japonica Group]
Length = 286
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDA 88
M R+ IYV + + ++ED F YG I ++ + PPG+ FVEFED RDA
Sbjct: 1 MSRRWSRTIYVGNLPGDI--REREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDR 127
E+A G DG +G R+RVE ++ GR NG S DR
Sbjct: 59 EEACAGRDGYNFDGHRLRVEPAH----GGRGNGGSSFDR 93
>gi|52140010|gb|AAU29332.1| ASF/SF2-like pre-mRNA splicing factor SRP30' [Zea mays]
Length = 241
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+
Sbjct: 20 EREVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|448878405|gb|AGE46165.1| arginine/serine-rich splicing factor RS2Z37 transcript I
[Physcomitrella patens subsp. patens]
Length = 331
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 15/123 (12%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
+YV + ST + D+ED F+ YG +++V V + F FVEF D RDA+DA +G+
Sbjct: 45 LYVGRL--STRTRSRDLEDLFAKYGRVRDVDVKHD---FAFVEFADARDADDARHYVNGK 99
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
+ +G R+ VE + RG G SGG R Y G RG P +CY CG GH+ARD
Sbjct: 100 DFDGNRLIVEFAR----RG-PRGASGGAREYLG----RGPPPG-TGRCYNCGNDGHWARD 149
Query: 159 CRS 161
C++
Sbjct: 150 CKA 152
>gi|448878358|gb|AGE46142.1| arginine/serine-rich splicing factor SR30 transcript I [Sorghum
bicolor]
Length = 255
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+++D F YG I ++ + PPGF FVEFED DAEDA+ G DG +G R+RVE+++
Sbjct: 22 EVDDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPHDAEDAIYGRDGYNFDGHRLRVELAH 81
>gi|357115606|ref|XP_003559579.1| PREDICTED: glycine-rich RNA-binding protein 2-like [Brachypodium
distachyon]
Length = 160
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 13/118 (11%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S +T+ +E AF +G I +V V GFGFV F D R A DA+ +E++
Sbjct: 15 SWCTTERTVEGAFRRFGKIVHVQVITERHTGRSRGFGFVIFSDPRAAIDAIMWMHNQELD 74
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
G + V +NP + + GG GY GS RA G C+ CG GH+A DC
Sbjct: 75 GHTITVFWANP-----KVDNADGGRDGYCGSGRAAG---FGGGCCFACGRPGHWAPDC 124
>gi|52140006|gb|AAU29329.1| ASF/SF2-like pre-mRNA splicing factor SRP32' [Zea mays]
gi|413955776|gb|AFW88425.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 257
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ V PPG+ FVEFED RDAE+A+ G DG +G R+RVE ++
Sbjct: 22 EVEDLFYKYGKIVDIDLKVPPRPPGYAFVEFEDPRDAEEAIAGRDGYNFDGHRLRVEAAH 81
>gi|443730022|gb|ELU15717.1| hypothetical protein CAPTEDRAFT_175255 [Capitella teleta]
Length = 163
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
++KED+ AF YG + +V++ R+P GF FV + ++RDAEDA+ DG ++GR
Sbjct: 23 TSKEDLLQAFEKYGEVGDVYIPRDPYTRENKGFAFVRYYEKRDAEDAIDSMDGAVLDGRE 82
Query: 105 VRVEMS 110
+RV+ +
Sbjct: 83 LRVQTA 88
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKCICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|195996923|ref|XP_002108330.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
gi|190589106|gb|EDV29128.1| hypothetical protein TRIADDRAFT_49822 [Trichoplax adhaerens]
Length = 223
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 54 DIEDAFSYYGPIKNVWVARNP--PGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
D+ED F YG I ++ + N P F FVEFED+RDAEDA+ G DG + +G R+RVE
Sbjct: 22 DLEDLFYKYGKILSISLKDNRRGPPFAFVEFEDKRDAEDAIDGRDGYDFDGCRLRVE 78
>gi|448878372|gb|AGE46149.1| arginine/serine-rich splicing factor SR27 transcript II [Sorghum
bicolor]
Length = 165
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 81
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
Length = 217
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|225439817|ref|XP_002277105.1| PREDICTED: uncharacterized protein LOC100258584 [Vitis vinifera]
Length = 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 14/117 (11%)
Query: 45 LCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
L S + T+ D+E FS YG +++V + + F FVEF D RDA+DA +GR+ +G R
Sbjct: 18 LSSRTRTR-DLESLFSRYGRVRDVDMKHD---FAFVEFSDPRDADDARYNLNGRDFDGSR 73
Query: 105 VRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
+ VE + K R + RG GR C+ CG GH+ARDC++
Sbjct: 74 IIVEFA---KGGPRGGSGGSREYLGRGPPPGSGR-------CFNCGIDGHWARDCKA 120
>gi|224132592|ref|XP_002321360.1| predicted protein [Populus trichocarpa]
gi|222868356|gb|EEF05487.1| predicted protein [Populus trichocarpa]
Length = 240
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + ++ IED F YG I +V + PP + FVEFE+ RDA
Sbjct: 1 MSGRFSRTIYVGNLPADIRESE--IEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|242052807|ref|XP_002455549.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
gi|241927524|gb|EES00669.1| hypothetical protein SORBIDRAFT_03g013010 [Sorghum bicolor]
Length = 186
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G DG +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAIYGRDGYNFDGYRLRVELAH 81
>gi|2078531|gb|AAC53171.1| Mlark [Mus musculus]
Length = 367
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
S + T +++ F YGP+ + ++ + FV E DA +A+RG D E G+R+
Sbjct: 86 SPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTEFQGKRMH 142
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSG 165
V++S + G G CY CG GH++++C RSG
Sbjct: 143 VQLSTSRLRTAPGMGDQSG--------------------CYRCGKEGHWSKECPIDRSG 181
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+++I F YG + + +N +GFV ED+ AEDA+R +++G + VE
Sbjct: 13 ATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69
Query: 110 S-NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
S N K + + + +RA+ + P EC YA R
Sbjct: 70 SKNKSKASTKLHVGNISPTCTNQELRAKFEEYGP---VIECDIVKDYAFVHMERAEDAV- 125
Query: 169 RPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDK-CYECG 225
+ +RG N G R + + R R P D CY CG
Sbjct: 126 -------------------EAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCG 166
Query: 226 GRGHYARDCRSRRSG 240
GH++++C RSG
Sbjct: 167 KEGHWSKECPIDRSG 181
>gi|407039318|gb|EKE39578.1| RNA recognition motif (RRM, RBD, or RNP domain) containing protein
[Entamoeba nuttalli P19]
Length = 199
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN----PPGFGFVEFEDRRDAEDAV 92
L +YV + +T K+ +++ F+ G IKN VA + GFGFV F D AE AV
Sbjct: 4 LEVYVGNLSLNTD--KDKLKEVFASVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+G+EI+G V V++S PQ + R + RS Y G
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSSYRHSYHG 100
>gi|293337151|ref|NP_001168362.1| uncharacterized protein LOC100382130 [Zea mays]
gi|223945609|gb|ACN26888.1| unknown [Zea mays]
gi|223947765|gb|ACN27966.1| unknown [Zea mays]
gi|413950152|gb|AFW82801.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
Length = 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 14/97 (14%)
Query: 65 IKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSG 124
I+ V + R+ + F+EF D RDA+DA DGR+++G R+ VE + +G G SG
Sbjct: 27 IREVELKRD---YAFIEFSDPRDADDAQYNLDGRDVDGSRIIVEFA-----KGVPRG-SG 77
Query: 125 GDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRS 161
G R Y G RG P +C+ CG GH+ARDC++
Sbjct: 78 GSRDYNG----RGPPPG-TGRCFNCGVDGHWARDCQA 109
>gi|147788227|emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKE-DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRD 87
M R+ IYV + S +E +IED F YG I +V + PP + FVEFE+ RD
Sbjct: 1 MSGRFSRTIYVGNL---PSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRD 57
Query: 88 AEDAVRGFDGREINGRRVRVEMSN 111
AEDA+RG DG +G R+RVE+++
Sbjct: 58 AEDAIRGRDGYNFDGCRLRVELAH 81
>gi|355754034|gb|EHH57999.1| hypothetical protein EGM_07756 [Macaca fascicularis]
Length = 248
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAEDAV G DG + G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYYGYRLRVEF 88
>gi|158260889|dbj|BAF82622.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED +DAEDAV G DG + +G R+RVE
Sbjct: 30 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPQDAEDAVYGRDGYDYDGYRLRVEF 88
>gi|268531976|ref|XP_002631116.1| C. briggsae CBR-RSP-2 protein [Caenorhabditis briggsae]
Length = 279
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++ V I +T D+E F YG + +V + +N GFGFV+F+++RDA+DAV +G
Sbjct: 1 MVRVYIGRLPNRATDRDVEHFFRGYGKLSDV-IMKN--GFGFVDFQEQRDADDAVHDLNG 57
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+++ G RV +E P++ G + RSGG G+RG
Sbjct: 58 KDLCGERVILEF--PRRKVGYNEERSGG--GFRG 87
>gi|359490737|ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359490739|ref|XP_003634149.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
gi|302143975|emb|CBI23080.3| unnamed protein product [Vitis vinifera]
Length = 250
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKE-DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRD 87
M R+ IYV + S +E +IED F YG I +V + PP + FVEFE+ RD
Sbjct: 1 MSGRFSRTIYVGNL---PSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRD 57
Query: 88 AEDAVRGFDGREINGRRVRVEMSN 111
AEDA+RG DG +G R+RVE+++
Sbjct: 58 AEDAIRGRDGYNFDGCRLRVELAH 81
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDAFHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|313227227|emb|CBY22374.1| unnamed protein product [Oikopleura dioica]
Length = 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+ F +G IK++ + PG+GFV FED+RDAE+A R DG+ + G +V VEM+
Sbjct: 21 DVEEFFKGFGHIKSINLK---PGYGFVVFEDKRDAEEAARDLDGKRMCGEKVDVEMAKGP 77
Query: 114 KMRGRSNGRSGGDR 127
+ R GDR
Sbjct: 78 GNKSRKEYSRSGDR 91
>gi|108708090|gb|ABF95885.1| Pre-mRNA splicing factor SF2, putative, expressed [Oryza sativa
Japonica Group]
Length = 236
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDAE+A G DG +G R+RVE ++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAH 81
Query: 112 PQKMRGRSNGRSGGDR 127
GR NG S DR
Sbjct: 82 G----GRGNGGSSFDR 93
>gi|2078529|gb|AAC51293.1| Hlark [Homo sapiens]
Length = 366
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
S + T +++ F YGP+ + ++ + FV E DA +A+RG D E G+R+
Sbjct: 86 SPTCTNKELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTEFQGKRMH 142
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSG 165
V++S + G G CY CG GH++++C RSG
Sbjct: 143 VQLSTSRLRTAPGMGDQSG--------------------CYRCGKEGHWSKECPIDRSG 181
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+++I F YG + + +N +GFV ED+ AEDA+R +++G + VE
Sbjct: 13 ATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69
Query: 110 S-NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
S N K + + + +RA+ + P EC YA R
Sbjct: 70 SKNKSKTSTKLHVGNISPTCTNKELRAKFEEYGP---VIECDIVKDYAFVHMERAEDAV- 125
Query: 169 RPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGY--RGSVRARGRPFNPDDK-CYECG 225
+ +RG N G R + + R R P D CY CG
Sbjct: 126 -------------------EAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCG 166
Query: 226 GRGHYARDCRSRRSG 240
GH++++C RSG
Sbjct: 167 KEGHWSKECPIDRSG 181
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|67473916|ref|XP_652707.1| splicing factor, arginine/serine-rich [Entamoeba histolytica
HM-1:IMSS]
gi|56469586|gb|EAL47321.1| splicing factor, arginine/serine-rich, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706789|gb|EMD46560.1| RNAbinding region RNP-1, putative [Entamoeba histolytica KU27]
Length = 199
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN----PPGFGFVEFEDRRDAEDAV 92
L +YV + +T K+ +++ F+ G IKN VA + GFGFV F D AE AV
Sbjct: 4 LEVYVGNLSLNTD--KDKLKEVFASVGEIKNSRVATHKDGASKGFGFVTFNDEETAEKAV 61
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+G+EI+G V V++S PQ + R + RS Y G
Sbjct: 62 NEMNGKEIDGSIVVVQISRPQDRKRRDHYRSSYRHSYHG 100
>gi|56758822|gb|AAW27551.1| SJCHGC05822 protein [Schistosoma japonicum]
gi|226469552|emb|CAX76606.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469554|emb|CAX76607.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469556|emb|CAX76608.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469558|emb|CAX76609.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469560|emb|CAX76610.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469562|emb|CAX76611.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226469564|emb|CAX76612.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472960|emb|CAX71166.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472964|emb|CAX71168.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
gi|226472966|emb|CAX71169.1| Splicing factor, arginine/serine-rich 1 [Schistosoma japonicum]
Length = 225
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 54 DIEDAFSYYGPIKNVWV---ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
DIE+ FS YGPI + + R P F FVEFED DA DAVRG DG +G +RVE+
Sbjct: 21 DIENLFSKYGPIAAIDLKAGQRRGPPFAFVEFEDELDASDAVRGRDGYNFDGYALRVEL 79
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|255079748|ref|XP_002503454.1| RNA binding domain-containing protein [Micromonas sp. RCC299]
gi|226518721|gb|ACO64712.1| RNA binding domain-containing protein [Micromonas sp. RCC299]
Length = 302
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 97/240 (40%), Gaps = 38/240 (15%)
Query: 24 EIEDPVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN------PPGF 77
+ E+ V+ I+ L ++ S + +D++D F G + + + G
Sbjct: 28 DYEEEVIEISTNRLYVHN----LSWRVSWQDLKDHFRQAGEVVHTKILTEGGPGGRSKGC 83
Query: 78 GFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARG 137
G VE +A AV ++GR + + R + +GG G G
Sbjct: 84 GIVEMATIDEAARAVEMLSDTNLDGRNILIRED-------REDRANGGGFDRPGPGGRGG 136
Query: 138 RPFNPDDKCYECGGRGHYARDCRSRRSGGSGR--PELCKINGRRVRVEMSNPQKMRGRSN 195
P PDD C +CGGRGH+A DC S+ S G GR P + R+ R + +K +
Sbjct: 137 NPARPDDICNKCGGRGHWAGDCPSQVSVGRGRAAPRSREPERRKFRDDHDRREKPKRERR 196
Query: 196 GRSGGDRGYR------------------GSVRARG-RPFNPDDKCYECGGRGHYARDCRS 236
D+ R VR RG R PDD C +CG GH+ARDC S
Sbjct: 197 EPGPDDKCNRCGETGHWARDCPLPRDENAPVRERGPRQPKPDDVCKKCGQTGHWARDCPS 256
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 163 RSGGSGRPELCKINGRRVRVEMSNPQKMRGRS--------NGRSGGDRGYRGSVRARGRP 214
RS G G E+ I+ VEM + + GR+ + +GG G G P
Sbjct: 79 RSKGCGIVEMATIDEAARAVEMLSDTNLDGRNILIREDREDRANGGGFDRPGPGGRGGNP 138
Query: 215 FNPDDKCYECGGRGHYARDCRSRRSGGGGR 244
PDD C +CGGRGH+A DC S+ S G GR
Sbjct: 139 ARPDDICNKCGGRGHWAGDCPSQVSVGRGR 168
>gi|115463447|ref|NP_001055323.1| Os05g0364600 [Oryza sativa Japonica Group]
gi|113578874|dbj|BAF17237.1| Os05g0364600 [Oryza sativa Japonica Group]
Length = 294
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G G + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAH 81
>gi|222631305|gb|EEE63437.1| hypothetical protein OsJ_18250 [Oryza sativa Japonica Group]
Length = 305
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G G + +G R+RVE+++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVELAH 81
>gi|115452963|ref|NP_001050082.1| Os03g0344100 [Oryza sativa Japonica Group]
gi|113548553|dbj|BAF11996.1| Os03g0344100 [Oryza sativa Japonica Group]
Length = 264
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDAE+A G DG +G R+RVE ++
Sbjct: 22 EVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAEEACAGRDGYNFDGHRLRVEPAH 81
Query: 112 PQKMRGRSNGRSGGDR 127
GR NG S DR
Sbjct: 82 G----GRGNGGSSFDR 93
>gi|156394189|ref|XP_001636709.1| predicted protein [Nematostella vectensis]
gi|156223814|gb|EDO44646.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 52 KEDIEDAFSYYGPIKNVWVARN---PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++D+ D F YG I +V + P F FVEFED RDAEDAV+G DG E +G R+RVE
Sbjct: 22 EKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGRDGHEFDGYRIRVE 81
Query: 109 M 109
Sbjct: 82 F 82
>gi|354485618|ref|XP_003504980.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cricetulus
griseus]
Length = 172
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVR 93
+YV I+ S ED+ F YGPI +V+V R P GF +V+FED RDAEDA+
Sbjct: 1 MYVEILEACFRS--EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 58
Query: 94 GFDGREINGRRVRVEMS-----NPQKMRGR 118
D + I GR++ ++ + P +M+ +
Sbjct: 59 NLDRKWICGRQIEIQFAQGDRKTPNQMKAK 88
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAED 90
M + V + T T ED++ F YG + +V++ R+P GF FV F D+RD ED
Sbjct: 13 MTSLKVDNLTYRT--TPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCED 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A+ DG ++GR +RV+M+
Sbjct: 71 AMDSLDGYILDGRELRVQMA 90
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 43 IVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDG 97
I S S+T E ++DAF +G + V + GF FV F++++D E A+ +G
Sbjct: 11 IGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIEDMNG 70
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGY---RGSVRARGRP---------FNPDDK 145
+++GR + V+ + PQ GR GDR Y RGS RGR
Sbjct: 71 LDLDGRAITVDKAQPQGA-GRDR---NGDRDYDRDRGSRNDRGRDSGGGRAPRGSGGGGD 126
Query: 146 CYECGGRGHYARDCRSRRSGGSGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYR 205
C++CG GH+AR+C G GR + + +GR R + RS+ GGDR R
Sbjct: 127 CFKCGKPGHFAREC---PDGDGGRGD--RYSGRDDRYGGGRSDRGSDRSD--RGGDRSDR 179
Query: 206 GSVR 209
G R
Sbjct: 180 GGDR 183
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAED 90
M + V + T T ED++ F YG + +V++ R+P GF FV F D+RD ED
Sbjct: 13 MTSLKVDNLTYRT--TPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCED 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A+ DG ++GR +RV+M+
Sbjct: 71 AMDALDGYMMDGRELRVQMA 90
>gi|54291866|gb|AAV32234.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 151
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G G + +G R+RVE+
Sbjct: 20 EREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla gorilla
gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|297264540|ref|XP_001103237.2| PREDICTED: splicing factor, arginine/serine-rich 1-like [Macaca
mulatta]
Length = 300
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAED V G DG + G R+RVE
Sbjct: 82 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEF 140
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|225712990|gb|ACO12341.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis]
Length = 250
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
D+E F YG I+ V + G+GFVEF+D RDA+D V DG+E G RVRVEM+
Sbjct: 20 DVEKLFKEYGRIREVVIK---SGYGFVEFDDPRDADDVVNDMDGKEFQGGRVRVEMA 73
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 12/99 (12%)
Query: 32 IARYMLVIYVSIVL--CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGR 118
RDAEDA+ D + I GR++ ++ + P +M+ +
Sbjct: 61 VRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
>gi|432898455|ref|XP_004076510.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 222
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FV+FED RDAEDAV G DG + +G R+RVE
Sbjct: 29 KDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFEDPRDAEDAVYGRDGYDYDGYRLRVEF 87
>gi|297840491|ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
gi|297333968|gb|EFH64386.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata]
Length = 286
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIK--NVWVARN---PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S T+ +E F YG I + V ++ P GFGF+ F DRR A++A++ GRE+
Sbjct: 19 LSWDVTERQLESTFDRYGKITECQIMVGKDTGRPRGFGFITFTDRRGADEAIKHMHGREL 78
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
R + V + P K+ G GY S R +G +D+C++C GH+ARDC
Sbjct: 79 GDRVISVNKAEP-KVGGDDVDHLQKGGGY--SSRGKG----SEDECFKCRRPGHWARDCP 131
Query: 161 SRRSGGSG---------RPELCKINGRRVRVEMSNPQKMRGR 193
S +GG G R L + +G R R + ++ R R
Sbjct: 132 S--TGGEGGRFRVSLAMRSRLGEFDGHRDRYGDRDLERERDR 171
>gi|147899629|ref|NP_001079656.1| serine/arginine-rich splicing factor 10 [Xenopus laevis]
gi|28302303|gb|AAH46695.1| MGC53149 protein [Xenopus laevis]
Length = 258
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 32 IARYMLVIYVSIVLCSTSST--KEDIEDAFSYYGPIKNVWVA-----RNPPGFGFVEFED 84
++RY+ S+ + + + ED+ F YGPI +V+V R P GF +V+FED
Sbjct: 1 MSRYLRPPNSSLFVRNIADDIRSEDLRREFGRYGPIVDVYVPLDYYNRRPRGFAYVQFED 60
Query: 85 RRDAEDAVRGFDGREINGRRVRVEMS-----NPQKMRGRSNGRSGGDRGY 129
RDAEDA+ D + I GR++ ++ + P +M+ + + G Y
Sbjct: 61 VRDAEDALHNLDKKWICGRQIEIQFAQGDRKTPHQMKAKEGSSTYGSSRY 110
>gi|355565042|gb|EHH21531.1| hypothetical protein EGK_04623, partial [Macaca mulatta]
Length = 231
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+DIED F YG I+++ + R P F FVEFED RDAED V G DG + G R+RVE
Sbjct: 60 KDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDLRDAEDVVYGRDGYDYYGYRLRVEF 118
>gi|339239261|ref|XP_003381185.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
gi|316975801|gb|EFV59199.1| 26S protease regulatory subunit 4 [Trichinella spiralis]
Length = 646
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 4/65 (6%)
Query: 48 TSSTKE-DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
TS +E D+E+ F YG I+ + + G+GFVEF++RRDA+DAV +G+ + G ++R
Sbjct: 12 TSDIRENDLENFFKGYGRIREITLKN---GYGFVEFDERRDADDAVHDLNGKPLLGEKIR 68
Query: 107 VEMSN 111
VEM++
Sbjct: 69 VEMAH 73
>gi|224285040|gb|ACN40249.1| unknown [Picea sitchensis]
Length = 398
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+ +IED F YG I ++ + PPG+ F+EF++ RDAEDA+RG DG + +G R+RVE
Sbjct: 19 ESEIEDLFYKYGRIIDIDLKLPPRPPGYCFIEFDNARDAEDAIRGRDGYKFDGHRLRVE 77
>gi|395521768|ref|XP_003764987.1| PREDICTED: serine/arginine-rich splicing factor 10 [Sarcophilus
harrisii]
Length = 347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 53 EDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
ED+ F YGPI +V+V R P GF +V+FED RDAEDA+ D + I GR++ +
Sbjct: 109 EDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 168
Query: 108 EMS-----NPQKMRGR 118
+ + P +M+ +
Sbjct: 169 QFAQGDRKTPNQMKAK 184
>gi|358336433|dbj|GAA54942.1| splicing factor arginine/serine-rich 1/9 [Clonorchis sinensis]
Length = 251
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 54 DIEDAFSYYGPIKNVWV-ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNP 112
D+E+ FS YGPI + + +R P F F+EFED DA DAVRG DG +G +RVE P
Sbjct: 21 DVENLFSKYGPIAEIDLKSRRGPPFAFIEFEDELDAADAVRGRDGYNFDGYALRVEF--P 78
Query: 113 QKMRGRSNGRSG 124
+ NG G
Sbjct: 79 RGGTASYNGSGG 90
>gi|17535713|ref|NP_496441.1| Protein RSP-2 [Caenorhabditis elegans]
gi|56749459|sp|Q23120.1|RSP2_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 2;
AltName: Full=CeSRp40; AltName: Full=RNA-binding protein
srp-4
gi|3880428|emb|CAA91394.1| Protein RSP-2 [Caenorhabditis elegans]
Length = 281
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
++ V I ++ D+E F YG + +V + +N GFGFV+F+D+RDA+DAV +G
Sbjct: 1 MVRVYIGRLPNRASDRDVEHFFRGYGKLSDV-IMKN--GFGFVDFQDQRDADDAVHDLNG 57
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+E+ G RV +E P++ G + RSG G+RG
Sbjct: 58 KELCGERVILEF--PRRKVGYNEERSGS--GFRG 87
>gi|443319940|ref|ZP_21049081.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
gi|442790348|gb|ELR99940.1| RRM domain-containing RNA-binding protein [Gloeocapsa sp. PCC
73106]
Length = 98
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAEDA 91
+ IYV + S + T+E++++ F YG +K V++ +P GFGFVE E + A
Sbjct: 1 MSIYVGNL--SYNVTQEELKEVFEDYGKVKRVYLPTDPETGKLRGFGFVEMETDEQEDAA 58
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYR 130
+ DG E GR +RV + P++ RG S G GG+R R
Sbjct: 59 IETLDGAEWMGREMRVNKAKPRENRGDSGG--GGNRKIR 95
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+T ED++ F YG + +V++ R+P GF FV F D+RD EDA+ DG ++GR
Sbjct: 10 TTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDALDGYMMDGRE 69
Query: 105 VRVEMS 110
+RV+M+
Sbjct: 70 LRVQMA 75
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVA--RN--PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S +T++ ++ F YG IK V + RN P G+GF+EFE+ RD ++A + DG++I+
Sbjct: 105 ISYDTTEKKLKREFDQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKNADGKKID 164
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRG 128
GRRV V++ + + G R GG RG
Sbjct: 165 GRRVLVDVERARTVPGWLPRRLGGGRG 191
>gi|399217453|emb|CCF74340.1| unnamed protein product [Babesia microti strain RI]
Length = 203
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+T E + +AF +GPI++V++ + P GFGFVEF D RDA A+R DG E++G +
Sbjct: 46 TTPEILREAFEKFGPIRDVYIPLEYYTKKPRGFGFVEFHDFRDANMALREMDGGELDGNK 105
Query: 105 VRV 107
+ V
Sbjct: 106 IEV 108
>gi|126342407|ref|XP_001375013.1| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 326
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T++D+ + F+ YGPI NV V +R GF FV FE +A++A G
Sbjct: 154 LGVFGLSLFTTEKDLREIFAKYGPISNVAVVYDQQSRRSRGFAFVYFESVDNAKEAREGA 213
Query: 96 DGREINGRRVRVEMS 110
DG E++GRR+RV+ S
Sbjct: 214 DGLEVDGRRIRVDFS 228
>gi|410910210|ref|XP_003968583.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Takifugu
rubripes]
gi|47227796|emb|CAG08959.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F F+EFED RDA+DAV G DG + +G R+RVE
Sbjct: 28 KDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEF 86
>gi|255557727|ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 264
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKE-DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRD 87
M R+ IYV + S +E ++ED F YG I ++ + PP + FVEFE+ RD
Sbjct: 1 MSGRFSRTIYVGNL---PSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRD 57
Query: 88 AEDAVRGFDGREINGRRVRVEMSN 111
AEDA+RG DG +G R+RVE+++
Sbjct: 58 AEDAIRGRDGYNFDGCRLRVELAH 81
>gi|145527274|ref|XP_001449437.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417025|emb|CAK82040.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
++V+ S ++D+ D F YG IK V + FV F + +A++A++G +G+
Sbjct: 9 LFVAGYSRSKVQDEKDVRDIFKKYGTIKEVAYK---GSYSFVTFSNESEAQEALKGTNGQ 65
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
NG++++V++ + +K GR G N +DKC++C GH+AR+
Sbjct: 66 SYNGQKLKVDVVDNRK------GRKTGP--------------NEEDKCFKCNKGGHWARN 105
Query: 159 C 159
C
Sbjct: 106 C 106
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 49 SSTKEDIEDAFSYYGPIKNV----WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
S T++D+ F YG +K V +A P GF +VEFE RDA A+ D E GR+
Sbjct: 793 SCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQ 852
Query: 105 VRVEMSNPQKMRGRSNGRSG-GDRG 128
++V +SNP S G +G G+RG
Sbjct: 853 LQVALSNPP-----SKGHAGEGERG 872
>gi|291190420|ref|NP_001167114.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
gi|223648208|gb|ACN10862.1| Splicing factor, arginine/serine-rich 1 [Salmo salar]
Length = 251
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F F+EFED RDA+DAV G DG + +G R+RVE
Sbjct: 29 KDVEDVFYKYGAIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEF 87
>gi|403353670|gb|EJY76377.1| hypothetical protein OXYTRI_02116 [Oxytricha trifallax]
Length = 301
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 76 GFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRA 135
+ F+EF++ RDAE+AV G+++ G ++ +E S K GR N + + + S R+
Sbjct: 102 NYAFIEFDNERDAEEAVDELQGKDMGGLKINIEWS---KKSGRFNAKDS--KRPQRSERS 156
Query: 136 RGRPFNPDDKCYECGGRGHYARDCRS 161
R D KCY C GH+ARDCR+
Sbjct: 157 RD-----DLKCYNCNKTGHFARDCRA 177
>gi|432889874|ref|XP_004075374.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oryzias
latipes]
Length = 245
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F F+EFED RDA+DAV G DG + +G R+RVE
Sbjct: 28 KDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEF 86
>gi|348505538|ref|XP_003440318.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 244
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F F+EFED RDA+DAV G DG + +G R+RVE
Sbjct: 28 KDVEDVFYKYGTIRDIDLKNRRGGPPFAFIEFEDPRDADDAVYGRDGYDYDGYRLRVEF 86
>gi|51854465|gb|AAU10844.1| putative SF2/ASF splicing modulator Srp30 [Oryza sativa Japonica
Group]
Length = 145
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ ++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G G + +G R+RVE+
Sbjct: 20 EREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAQDAIYGRHGYDFDGHRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
+I + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 16 MISLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 75
Query: 93 RGFDGREINGRRVRVEMS 110
DGR+++GR +RV+M+
Sbjct: 76 EAMDGRKLDGRELRVQMA 93
>gi|327289700|ref|XP_003229562.1| PREDICTED: RNA-binding protein 4B-like [Anolis carolinensis]
Length = 354
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 25/128 (19%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
ST T ++ F YGP+ + ++ + FV E DA +A+RG D E G+R+R
Sbjct: 86 STGCTNLELRFKFEEYGPVLECDIVKD---YAFVHMERAEDAVEAIRGLDNTEFQGKRMR 142
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
V++S + G G CY CG GH++++C R+G
Sbjct: 143 VQLSTSRLRTAPGMGDKSG--------------------CYRCGKEGHWSKECPVDRTGQ 182
Query: 167 SGRPELCK 174
PEL +
Sbjct: 183 V--PELTE 188
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+++I F YG + + +N +GFV ED+ AEDA+R +++G + VE
Sbjct: 13 ATEQEIRSLFEQYGRVLECDIIKN---YGFVHIEDKTAAEDAIRNLHHYKLHGVCINVEA 69
Query: 110 S-NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
S N K + + + +R + + P EC YA R
Sbjct: 70 SKNKSKASTKLHVGNISTGCTNLELRFKFEEYGP---VLECDIVKDYAFVHMERAEDAVE 126
Query: 169 R---PELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECG 225
+ + G+R+RV++S + G G CY CG
Sbjct: 127 AIRGLDNTEFQGKRMRVQLSTSRLRTAPGMGDKSG--------------------CYRCG 166
Query: 226 GRGHYARDCRSRRSG 240
GH++++C R+G
Sbjct: 167 KEGHWSKECPVDRTG 181
>gi|312066123|ref|XP_003136120.1| hypothetical protein LOAG_00532 [Loa loa]
Length = 201
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+AFS +G + VWVA PP F FV F+++ DA +A+ + I RVRV ++ P+
Sbjct: 61 DLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTYIRNCRVRVSVALPR 120
>gi|145476343|ref|XP_001424194.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391257|emb|CAK56796.1| unnamed protein product [Paramecium tetraurelia]
Length = 161
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 34/126 (26%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNV-WVARNPPGFGFVEFEDRRDAEDAVRGFDG 97
IYV+ ST ++ DI+ F+ +G I+ W R F F+ + DA DAVR +
Sbjct: 16 IYVTGY--STKESEMDIKSIFARHGEIQEFSWKGR----FCFIAYTKPEDAADAVRLMNQ 69
Query: 98 REINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYAR 157
+E+NGR + VE++ +K D CY+CG +GH+AR
Sbjct: 70 QEVNGRNLIVELARAKK---------------------------KDGACYQCGKQGHFAR 102
Query: 158 DCRSRR 163
+CR R
Sbjct: 103 NCRLNR 108
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVA--RN--PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S +T++ ++ F YG IK V + RN P G+GF+EFE+ RD ++A + DG++I+
Sbjct: 105 ISYDTTEKKLKREFEQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMKEAYKNADGKKID 164
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRG 128
GRRV V++ + + G R GG RG
Sbjct: 165 GRRVLVDVERARTVPGWLPRRLGGGRG 191
>gi|327296678|ref|XP_003233033.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
gi|326464339|gb|EGD89792.1| zinc knuckle nucleic acid binding protein [Trichophyton rubrum CBS
118892]
Length = 208
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 145 KCYECGGRGHYARDCRSRRSGG---SGRPELCKINGRRVR------VEMSNPQKMRGRSN 195
+CY C G GH DC + R G + R C + G R ++ NPQ +R +
Sbjct: 20 QCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNTGS 79
Query: 196 GRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 237
R G + G+RG R CY+CGG H+ARDC+++
Sbjct: 80 ARGGFNAGFRGGPAGYPR----AATCYKCGGPNHFARDCQAQ 117
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 33/131 (25%)
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
++ NPQ +R + R G + G+RG R CY+CGG H+ARDC++
Sbjct: 66 IQQQNPQAVRNTGSARGGFNAGFRGGPAGYPR----AATCYKCGGPNHFARDCQA----- 116
Query: 167 SGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDK-CYECG 225
Q M+ + G+ G R G P + K CY+C
Sbjct: 117 ---------------------QAMKCYACGKLG--HISRDCTAPNGGPLSSVGKVCYKCS 153
Query: 226 GRGHYARDCRS 236
GH +RDC +
Sbjct: 154 QAGHISRDCPT 164
>gi|227206256|dbj|BAH57183.1| AT4G02430 [Arabidopsis thaliana]
Length = 176
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 43 IVLCSTSSTKEDIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
++L S K F YGP+ + + PPG+ FVEFED RDA+DA+ G DG +
Sbjct: 9 LILFGRSFLKNCSSLFFLKYGPVVQIDLKIPPRPPGYAFVEFEDARDADDAIYGRDGYDF 68
Query: 101 NGRRVRVEMSN 111
+G +RVE+++
Sbjct: 69 DGHHLRVELAH 79
>gi|412989158|emb|CCO15749.1| predicted protein [Bathycoccus prasinos]
Length = 347
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 54 DIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+++D F YG I ++ + R +PP F F+EFED+RDAEDA DG E +G R+RVE+
Sbjct: 30 ELDDLFYKYGRIVHIKMPRCNHPPAFAFIEFEDKRDAEDAQYYRDGYEFDGNRLRVEI 87
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 53 EDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
ED+ F YGPI +V++ AR P GF +V+FED RDAEDA+ D GR + +
Sbjct: 46 EDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAEDAMYSLDRTRFYGRELEI 105
Query: 108 EMSN 111
E +
Sbjct: 106 EFAQ 109
>gi|357112280|ref|XP_003557937.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 289
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
++ED F YG I ++ V PPG+ FVEFED RDAEDA G DG +G R+RVE
Sbjct: 22 EVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGYNFDGNRLRVE 78
>gi|255648057|gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + + + +IED F YG I ++ V PP + FVEF++ RDA
Sbjct: 1 MSGRFSRTIYVGNL--PSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|269849649|sp|Q7SXP4.2|SRS1A_DANRE RecName: Full=Serine/arginine-rich splicing factor 1A; AltName:
Full=Splicing factor, arginine/serine-rich 1; AltName:
Full=Splicing factor, arginine/serine-rich 1A
gi|157423199|gb|AAI53597.1| Sfrs1l protein [Danio rerio]
gi|157423322|gb|AAI53598.1| Sfrs1l protein [Danio rerio]
Length = 257
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FVEFED RDAEDAV DG + +G R+RVE
Sbjct: 29 KDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEF 87
>gi|393909592|gb|EFO27939.2| hypothetical protein LOAG_00532 [Loa loa]
Length = 173
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+AFS +G + VWVA PP F FV F+++ DA +A+ + I RVRV ++ P+
Sbjct: 61 DLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTYIRNCRVRVSVALPR 120
>gi|156084620|ref|XP_001609793.1| splicing factor, arginine/serine-rich 3 [Babesia bovis T2Bo]
gi|154797045|gb|EDO06225.1| splicing factor, arginine/serine-rich 3, putative [Babesia bovis]
Length = 239
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPG--FGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
S T++DIED F +G + + + +N G F F+E+ED RDA DA++ DG E GRR+R
Sbjct: 18 SCTQKDIEDEFGKFGKLISCDLKKNAGGSTFAFLEYEDARDAHDAIKDRDGSEYEGRRLR 77
Query: 107 VEM 109
VE
Sbjct: 78 VET 80
>gi|354466061|ref|XP_003495494.1| PREDICTED: serine/arginine-rich splicing factor 12-like, partial
[Cricetulus griseus]
Length = 249
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
C+ S ED+ F YGPI +V++ R P GF +V+FED RDAEDA+ + + +
Sbjct: 5 CAGDSRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWV 64
Query: 101 NGRRVRVEMSN 111
GR++ ++ +
Sbjct: 65 CGRQIEIQFAQ 75
>gi|326495240|dbj|BAJ85716.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326504388|dbj|BAJ91026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510429|dbj|BAJ87431.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523109|dbj|BAJ88595.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 55 IEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+ED F YG I ++ V PPG+ FVEFED RDAEDA G DG +G R+RVE ++
Sbjct: 23 VEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAEDACAGRDGYNFDGNRLRVEPAH 81
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ S+ ++D+E F YG I+++ + R GFGFVEF+D RDAEDAV DG+E+ RV
Sbjct: 11 LNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNERV 67
Query: 106 RVE 108
+E
Sbjct: 68 TIE 70
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKE-DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRD 87
M +R+ IYV + S KE +IED F YG I ++ + PP + FVEFE RD
Sbjct: 1 MSSRFSRTIYVGNL---PSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRD 57
Query: 88 AEDAVRGFDGREINGRRVRVEMSN 111
AEDA+R DG +G R+RVE+++
Sbjct: 58 AEDAIRARDGYNFDGCRLRVELAH 81
>gi|357516359|ref|XP_003628468.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522490|gb|AET02944.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 273
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 62 YGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
YG I ++ V PPG+ FVEFED +DAEDA+RG DG + +G R+RVE ++
Sbjct: 3 YGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGRDGYDFDGHRLRVEAAH 54
>gi|357464169|ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
gi|355491414|gb|AES72617.1| RNA-binding protein [Medicago truncatula]
Length = 273
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M +R+ IYV + + +IED F YG I + V PP + FVEF++ RDA
Sbjct: 1 MSSRFSRTIYVGNLPADIRES--EIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|357464167|ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
gi|355491413|gb|AES72616.1| RNA-binding protein [Medicago truncatula]
Length = 272
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M +R+ IYV + + +IED F YG I + V PP + FVEF++ RDA
Sbjct: 1 MSSRFSRTIYVGNLPADIRES--EIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|225717806|gb|ACO14749.1| Serine-arginine protein 55 [Caligus clemensi]
Length = 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
D+E F YG I+ V + G+GFVEF+D RDA+D V DG+E G RVRVEM+
Sbjct: 20 DVEKFFKEYGRIREVVIKS---GYGFVEFDDPRDADDVVNDMDGKEFQGGRVRVEMA 73
>gi|47087630|ref|NP_998180.1| serine/arginine-rich splicing factor 1A [Danio rerio]
gi|33416587|gb|AAH55511.1| Splicing factor, arginine/serine-rich 1, like [Danio rerio]
Length = 245
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FVEFED RDAEDAV DG + +G R+RVE
Sbjct: 29 KDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYARDGYDYDGYRLRVEF 87
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREIN 101
S S+T E ++DAFS YG + V + GF FV F++++ E+A+ +G ++
Sbjct: 15 SWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIEDMNGLDLE 74
Query: 102 GRRVRVEMSNPQKMRGRSNGRSGGDRGYRGS----------VRARGRPFNPDDKCYECGG 151
GR + V+ + PQ + NG DR RGS RA C++CG
Sbjct: 75 GRAITVDKAQPQGVGRDRNGDRDFDRD-RGSRGDRGRDYGGGRAPRGGSGGGGDCFKCGK 133
Query: 152 RGHYARDC 159
GH+AR+C
Sbjct: 134 PGHFAREC 141
>gi|170578222|ref|XP_001894321.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158599142|gb|EDP36833.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 200
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E+AFS +G + VWVA PP F FV F+++ DA +A+ + I RVRV ++ P+
Sbjct: 61 DLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTYIRNCRVRVSVALPR 120
>gi|427418082|ref|ZP_18908265.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425760795|gb|EKV01648.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 98
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 37 LVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDA 91
+ +YV + S +TKED+ D F+ YG +K+ + + P GF FVE E + A
Sbjct: 1 MSVYVGNL--SYDATKEDVTDVFAEYGTVKSAHLPTDRETGRPRGFAFVEMETDAEETAA 58
Query: 92 VRGFDGREINGRRVRVEMSNPQKMRGRSNGRSG--GDRGY 129
+ DG E GR ++V + P++ RG S G G GDR Y
Sbjct: 59 IEALDGAEWMGRVLKVNKAKPREPRGGSGGNWGNKGDRRY 98
>gi|363807302|ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + + + +IED F YG I ++ V PP + FVEF++ RDA
Sbjct: 1 MSGRFSRTIYVGNL--PSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|297829568|ref|XP_002882666.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
gi|297328506|gb|EFH58925.1| hypothetical protein ARALYDRAFT_897216 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAV 92
+YVS + S T DI FS +G + V V R G FV + R DA A
Sbjct: 58 TLYVSNLDFSL--TNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 115
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGR 152
R D + +NGR++ V + D G R S + R + +CYECG
Sbjct: 116 RSMDAKILNGRKLTVSI--------------AADNG-RASEFIKKRVYKDKSRCYECGDE 160
Query: 153 GHYARDCRSRRSGGSGRPELCKINGRR 179
GH + +C + G RP K GRR
Sbjct: 161 GHLSYECPKNQLGPRERPPPPKKRGRR 187
>gi|380809044|gb|AFE76397.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|384944954|gb|AFI36082.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTS--PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|356516144|ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 263
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + + + +IED F YG I ++ V PP + FVEF++ RDA
Sbjct: 1 MSGRFSRTIYVGNL--PSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|34785785|gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S +T++ +E+AFS YG I V V R+ GFGFV FE+ DA+DA+ +G+++
Sbjct: 5 LSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQV 64
Query: 101 NGRRVRVE 108
+GR +RV+
Sbjct: 65 DGRMIRVD 72
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
+ S+ ++D+E F YG I+++ + R GFGFVEF+D RDAEDAV DG+E+ RV
Sbjct: 11 LNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNERV 67
Query: 106 RVE 108
+E
Sbjct: 68 TIE 70
>gi|145500822|ref|XP_001436394.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403533|emb|CAK68997.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 23/110 (20%)
Query: 55 IEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQK 114
I+D F YG IK+V + FV F +A++A+ +G++ING++++V++ + K
Sbjct: 25 IKDIFKKYGSIKDVAYK---GSYSFVTFSAESEAQNAISALNGQQINGQKLKVDIVDNHK 81
Query: 115 MRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRS 164
R RSG D+C++CG GH+AR+C +R S
Sbjct: 82 GR-----RSGPQE---------------KDECFKCGQGGHWARECPNRTS 111
>gi|388490247|ref|NP_001253264.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
gi|402894987|ref|XP_003910620.1| PREDICTED: serine/arginine-rich splicing factor 8 [Papio anubis]
gi|387542734|gb|AFJ71994.1| serine/arginine-rich splicing factor 8 [Macaca mulatta]
Length = 287
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTS--PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|30693836|ref|NP_851015.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
gi|20465265|gb|AAM19952.1| AT3g53500/F4P12_200 [Arabidopsis thaliana]
gi|24111329|gb|AAN46788.1| At3g53500/F4P12_200 [Arabidopsis thaliana]
gi|332645576|gb|AEE79097.1| RNA recognition motif and CCHC-type zinc finger domain-containing
protein [Arabidopsis thaliana]
Length = 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 77 FGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRAR 136
+ FVEF D RDA+DA DGR+ +G R+ VE S R R D G RG
Sbjct: 5 YAFVEFSDPRDADDARYYLDGRDFDGSRITVEAS-------RGAPRGSRDNGSRGPPPGS 57
Query: 137 GRPFNPDDKCYECGGRGHYARDC 159
GR C+ CG GH+ARDC
Sbjct: 58 GR-------CFNCGVDGHWARDC 73
>gi|301118214|ref|XP_002906835.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262108184|gb|EEY66236.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 233
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 53 EDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
EDI F YG +++V++ ++ P GF FVEF R+AEDA R DG I+GR +RV
Sbjct: 21 EDIRKEFERYGEVRDVYIPKDFYTKEPKGFAFVEFRSEREAEDARRNLDGVRIDGRDIRV 80
>gi|355566974|gb|EHH23353.1| hypothetical protein EGK_06805 [Macaca mulatta]
Length = 287
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTS--PDSLRRVFEKYGRVGDVYIPREHHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes]
Length = 287
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 123 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 182
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 183 NGMELDGRRIRVDFS 197
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 7/94 (7%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAVR 93
+YV+ + + T+ + D F+ +G ++ V +P GF FV FED RDA DAV+
Sbjct: 31 LYVANLAHRVTETE--LNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDANDAVQ 88
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDR 127
+G++I GRR+RVE + ++ ++ GR G R
Sbjct: 89 ELNGKDIQGRRIRVEHARRKRGHTKTPGRYLGPR 122
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S +T+E ++ YG IK + + RN P G+ FVEFE RD +DA + DGR++
Sbjct: 111 LSYDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHERDMKDAYKQADGRKV 170
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGG 125
+GRR+ V+ + ++ R GG
Sbjct: 171 DGRRIVVDFERGRTIKEWKPRRLGG 195
>gi|212275991|ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVR 93
I+V + T K ++DAF +G + +V + GFGFV FEDRR + A++
Sbjct: 9 IFVGGLSWQTDERK--LQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRAVDSAIK 66
Query: 94 GFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRG 153
G+E +GR + V + P+ + S G RG R P CYECG G
Sbjct: 67 EMRGQESDGRTISVNKAEPKMNTDDTRFDS---GGGRGEYRGGRGDGPPPGNCYECGRPG 123
Query: 154 HYARDCRSRRSGGSGR-PELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARG 212
H+ RDC S G SGR P GR R S+ R + GG GYR V AR
Sbjct: 124 HWVRDCPSAAGGRSGRFPSKFSGGGRGDRFSGSDRFNDRYMDDRYDGGRYGYRDQVDAR- 182
Query: 213 RPFNPDDKCYECGGRGHYARD 233
DK GGR YA D
Sbjct: 183 ------DKY--GGGRDRYAND 195
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 53 EDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
EDI F YG +++V++ + P GF FVEF R+A+DA R DG I+GR +RV
Sbjct: 246 EDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARRNLDGVRIDGRDIRV 305
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S +T++ +E+AFS YG I V V R+ GFGFV FE+ DA+DA+ +G+++
Sbjct: 12 LSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGKQV 71
Query: 101 NGRRVRVE 108
+GR +RV+
Sbjct: 72 DGRMIRVD 79
>gi|217071940|gb|ACJ84330.1| unknown [Medicago truncatula]
Length = 211
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 40 YVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRG 94
+V + STS K + D F +G + V + GFGFV +++++ EDA+
Sbjct: 10 FVGGLAWSTSDRK--LRDTFEKFGKLTEAKVVVDKFSGRSRGFGFVTYDEKKVMEDAIDA 67
Query: 95 FDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGH 154
+G +++GR + V+ + PQ+ R +G +RG RG + D C+ CG GH
Sbjct: 68 MNGIDLDGRTITVDRAQPQQGSARDDGDRYRERGRDRDRDYRGGRGSNDGGCFNCGKPGH 127
Query: 155 YARDC 159
+AR+C
Sbjct: 128 FAREC 132
>gi|242005811|ref|XP_002423754.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
gi|212506956|gb|EEB11016.1| serine/arginine rich splicing factor, putative [Pediculus humanus
corporis]
Length = 246
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAV 92
++ + + + +T +D+ F G + ++++ +R GF FV F D+RDAEDA+
Sbjct: 60 MVSLKVDNLTFRTTPDDLRRVFERCGEVGDIYIPRDRFSRESRGFAFVRFYDKRDAEDAL 119
Query: 93 RGFDGREINGRRVRVEM------SNPQKMRGRSNG 121
DGR ++GR +RV+M S+P + RGR G
Sbjct: 120 DAMDGRILDGRELRVQMARYGRPSSPYRSRGRRRG 154
>gi|296216761|ref|XP_002754708.1| PREDICTED: serine/arginine-rich splicing factor 8-like [Callithrix
jacchus]
Length = 295
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F D+RDAED
Sbjct: 13 MITLKVDNLTYRTS--PDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDQRDAED 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzias latipes]
Length = 288
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 124 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 183
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 184 NGMELDGRRIRVDFS 198
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
DI+D F YG I ++ + + FVEFED RDA DAV+ D +++NG RVR+E+S
Sbjct: 21 DIDDFFKGYGRIVDISI---KTKYAFVEFEDERDAADAVKDLDDQKLNGSRVRLEVSKGC 77
Query: 114 KMRGRSNGRSG 124
K + R R+G
Sbjct: 78 KDKYRDFQRTG 88
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKE-DIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRD 87
M +R+ IYV + S KE +IED F YG I ++ + PP + FVEFE RD
Sbjct: 1 MSSRFSRTIYVGNL---PSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRD 57
Query: 88 AEDAVRGFDGREINGRRVRVEMSN 111
AEDA+R DG +G R+RVE+++
Sbjct: 58 AEDAIRARDGYNFDGCRLRVELAH 81
>gi|348518531|ref|XP_003446785.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Oreochromis
niloticus]
Length = 264
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 53 EDIEDAFSYYGPIKNVWVA--RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+D+ED F YG I+++ + R P F FV+F+D RDAEDAV G DG + +G R+RVE
Sbjct: 29 KDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQFDDPRDAEDAVYGRDGYDYDGYRLRVEF 87
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
S ++ E + AF+ +G +K+V++ +R P GFGFVEF R DAE A+ DG E+
Sbjct: 17 LSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERALEKMDGFEL 76
Query: 101 NGRRVRVEM-----SNPQKMRGRSN--GRSGGDRGYR 130
+G+ + V + S PQ+M+ R R G RG R
Sbjct: 77 DGKAIEVAIAKKGRSAPQQMKQRDERGRREGSPRGRR 113
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGF 95
+ + + +T ED+ AF YG + +V++ R+ GF FV F D+RDAEDA+
Sbjct: 16 LKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALDSM 75
Query: 96 DGREINGRRVRVEMS 110
DG ++GR +RV+M+
Sbjct: 76 DGAIMDGRELRVQMA 90
>gi|76573323|gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
Length = 269
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M R+ IYV + ++ED F YG I ++ + PP + FVEFE RDA
Sbjct: 1 MSGRFSRSIYVGNLPADIKEL--EVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDA 58
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 59 EDAIRGRDGYNFDGCRLRVELAH 81
>gi|170579742|ref|XP_001894964.1| ADP-ribose pyrophosphatase, mitochondrial precursor [Brugia malayi]
gi|158598261|gb|EDP36190.1| ADP-ribose pyrophosphatase, mitochondrial precursor, putative
[Brugia malayi]
Length = 401
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + +D+ F YG I ++ + R+ GFGFV F RRDAE A+ DGR +
Sbjct: 297 ISYQTAPQDLRRLFEKYGEIGDIHIPRDRYTKQSKGFGFVRFYSRRDAEYAMDRMDGRWV 356
Query: 101 NGRRVRVEMSNPQK-MRGRSNGRSGGDRGYRGSVR 134
+GR +RV M+ ++ + RS R+GG GYR S R
Sbjct: 357 DGREIRVAMARYERPIDERS--RNGGSSGYRSSRR 389
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 82 EAMDGRMLDGRELRVQMA 99
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ V PP + FVEFE RDAEDA++G DG ++G R+RVE+
Sbjct: 20 EHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|427784005|gb|JAA57454.1| Putative alternative splicing factor [Rhipicephalus pulchellus]
Length = 181
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNP-PGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
+ + D+E F YG + V + FV++ED RDAEDAV+ +GREI G+ V V
Sbjct: 15 DTRERDVEQVFERYGRLLRCDVKYGTGMAYAFVDYEDHRDAEDAVKYENGREIRGQSVVV 74
Query: 108 EMSNPQKMRGRSNGRSGGDR-GYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
E + R +G DR GY+ D+CY C GH+ARDC
Sbjct: 75 EWARGPSFR----PSAGKDRMGYQSF-----------DECYRCRRTGHWARDC 112
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+T ED+ F G + ++++ R+ GF FV F D+RDAEDA+ DGR ++GR
Sbjct: 57 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRE 116
Query: 105 VRVEMS 110
+RV+M+
Sbjct: 117 LRVQMA 122
>gi|156406725|ref|XP_001641195.1| predicted protein [Nematostella vectensis]
gi|156228333|gb|EDO49132.1| predicted protein [Nematostella vectensis]
Length = 189
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
S + D+E+ F YG + + +GF+E+ED RDAE+A+R + R++ G R+
Sbjct: 14 SKETKLRDLENVFYLYGKLLRCDLK---TAYGFIEYEDPRDAEEAMRRENNRKLFGSRIV 70
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 162
VE G+RG V + RP D+C+ CG GH+A C SR
Sbjct: 71 VEYVR------------SGERG--KPVGGQTRPTVVGDECFVCGKLGHWASSCPSR 112
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S ++ ++D+E F YG I+++ + + GFGFVEF+D RDAEDAV DG+E+ RV
Sbjct: 11 LSPTAREKDVERFFKGYGRIRDIDLKK---GFGFVEFDDPRDAEDAVYELDGKELCNERV 67
Query: 106 RVE 108
+E
Sbjct: 68 TIE 70
>gi|392882418|gb|AFM90041.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
gi|392884370|gb|AFM91017.1| cold-inducible RNA-binding protein-like protein [Callorhinchus
milii]
Length = 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 8/96 (8%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+ ++ +E+ F+ YG + V V R GFGFV FE+ DA DA+ G +G+ ++GR+
Sbjct: 16 TDEQTLEEVFAKYGDVSEVIVIRERDTQRSKGFGFVTFENPDDARDALAGMNGKTVDGRQ 75
Query: 105 VRVE---MSNPQKMRGRSNGRSGGDRGYRGSVRARG 137
+RV+ S+ + R +G+S G+ +RG +RG
Sbjct: 76 IRVDHAGKSSGNRSRSYQSGQSYGNYSFRGGRSSRG 111
>gi|210075657|ref|XP_502448.2| YALI0D05547p [Yarrowia lipolytica]
gi|199425767|emb|CAG80636.2| YALI0D05547p [Yarrowia lipolytica CLIB122]
Length = 339
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
+ KE IED FS +GPIK V + +N +GF+EF+ DA A DG+ +NG +
Sbjct: 24 DTNKEQIEDLFSSHGPIKEVKLIKN---YGFIEFDSLDDAIRAKDNVDGQPLNGEPLFCT 80
Query: 109 MSNPQKMRGRSNGRSGGDRGYRGSVR 134
+NP K+R R DR RG R
Sbjct: 81 YANPIKVREPRTYRDRNDRNDRGGDR 106
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 82 EAMDGRMLDGRELRVQMA 99
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 30/121 (24%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
IYV S+ + ++D+E+ F +G I ++ + GF FVEF++ + A A+ DG+
Sbjct: 62 IYVGKF--SSRTGEKDLEETFKKFGKILSLDMK---AGFAFVEFDNEKSANQAIDEMDGK 116
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
E++G ++ V+ S+ + R D+CY C GRGH+AR+
Sbjct: 117 EVDGEKLIVQKSHGGRKRS-------------------------SDECYLCRGRGHWARN 151
Query: 159 C 159
C
Sbjct: 152 C 152
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 82 EAMDGRMLDGRELRVQMA 99
>gi|387219571|gb|AFJ69494.1| splicing factor, arginine/serine-rich 1/9 [Nannochloropsis gaditana
CCMP526]
Length = 277
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 54 DIEDAFSYYGPIKNVWVAR--NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
D++D F YG I+ + + R PP + FV FED RDA+DAV D + +G R+RVE++N
Sbjct: 18 DLDDLFYKYGRIRGIDIKRPSRPPAYAFVAFEDPRDAKDAVHYRDNYDFDGGRIRVELAN 77
Query: 112 PQKMRGRSNGRSGG 125
R G GG
Sbjct: 78 ETPRRRDDRGFGGG 91
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 82 EAMDGRMLDGRELRVQMA 99
>gi|324500331|gb|ADY40159.1| Splicing factor, arginine/serine-rich 3 [Ascaris suum]
Length = 244
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 52 KEDIEDAFSYYGPIK--NVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ D+ED F YG I ++ ++R P F F+EF+D RDA DAV G DG +++G R+RVEM
Sbjct: 20 QRDLEDLFYKYGRINYIDIKLSRGAP-FAFIEFDDPRDARDAVHGRDGYDMDGCRIRVEM 78
Query: 110 S 110
+
Sbjct: 79 T 79
>gi|298710995|emb|CBJ32302.1| arginine/serine-rich splicing factor 6 [Ectocarpus siliculosus]
Length = 235
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
+ I S + D++ AF YG I+ + V GF F+EFEDRRDAEDAV DGRE
Sbjct: 5 IYIGHLSPHTRDRDLDRAFGRYGRIEKIDVR---MGFAFIEFEDRRDAEDAVAEMDGREF 61
Query: 101 NGRRVRVE 108
+G R+ V+
Sbjct: 62 DGARIVVQ 69
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|218188085|gb|EEC70512.1| hypothetical protein OsI_01613 [Oryza sativa Indica Group]
Length = 447
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 54 DIEDAFSYYGPIKNV--WVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
++ED F YG I ++ + PPG+ FVEFED RDA+DA+ G D +G R+RVE+++
Sbjct: 211 EVEDLFYKYGRILDIDLKIPPRPPGYAFVEFEDPRDADDAICGRDRYNFDGYRLRVELAH 270
Query: 112 --------PQKMRGRSNGRSGG 125
+ R S+GR GG
Sbjct: 271 GGRGQSYSYDRPRSYSSGRRGG 292
>gi|355702927|gb|EHH29418.1| hypothetical protein EGK_09841 [Macaca mulatta]
Length = 202
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|326476591|gb|EGE00601.1| zinc knuckle domain-containing protein [Trichophyton tonsurans CBS
112818]
gi|326483934|gb|EGE07944.1| zinc knuckle domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 208
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 145 KCYECGGRGHYARDCRSRRSGG---SGRPELCKINGRRVR------VEMSNPQKMRGRSN 195
+CY C G GH DC + R G + R C + G R ++ NPQ +R +
Sbjct: 20 QCYHCQGLGHVQADCPTLRLNGGASNARCYSCNLPGHLARNCPSGGIQQQNPQAVRNAGS 79
Query: 196 GRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSR 237
R G + G+RG R CY+CGG H+ARDC+++
Sbjct: 80 TRGGFNAGFRGGPAGYPR----AATCYKCGGPNHFARDCQAQ 117
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 33/131 (25%)
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGG 166
++ NPQ +R + R G + G+RG R CY+CGG H+ARDC++
Sbjct: 66 IQQQNPQAVRNAGSTRGGFNAGFRGGPAGYPR----AATCYKCGGPNHFARDCQA----- 116
Query: 167 SGRPELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDK-CYECG 225
Q M+ + G+ G R G P + K CY+C
Sbjct: 117 ---------------------QAMKCYACGKLG--HISRDCTAPNGGPLSSVGKVCYKCS 153
Query: 226 GRGHYARDCRS 236
GH +RDC +
Sbjct: 154 QAGHISRDCPT 164
>gi|443712169|gb|ELU05591.1| hypothetical protein CAPTEDRAFT_222188 [Capitella teleta]
Length = 225
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 54 DIEDAFSYYGPIKNVWVARNPP-GFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNP 112
D+ED F YG I V + F++FED RDAEDA++ +GRE G + VE +
Sbjct: 22 DLEDRFEKYGRILRCDVKYGAEMAYAFLDFEDHRDAEDALKEENGREYQGVSMVVEWAKG 81
Query: 113 QKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCR 160
R +S+ ++ D+CY+C GH+ARDC+
Sbjct: 82 APRRQQSSQQAY-------------------DECYKCHRSGHWARDCK 110
>gi|441656594|ref|XP_003277032.2| PREDICTED: cold-inducible RNA-binding protein [Nomascus leucogenys]
Length = 144
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes]
Length = 297
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 133 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 192
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 193 NGMELDGRRIRVDFS 207
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I + ++ ++D+E F YG IK++ + R GFGFVEFED RDA+DAV DG+E+
Sbjct: 6 VFIGRLNPAAREKDVERFFKGYGRIKDIDLKR---GFGFVEFEDPRDADDAVYELDGKEL 62
Query: 101 NGRRVRVE 108
RV +E
Sbjct: 63 CSERVTIE 70
>gi|157279827|ref|NP_001098427.1| transformer 2b isoform 2 [Oryzias latipes]
gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzias latipes]
Length = 297
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 133 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 192
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 193 NGMELDGRRIRVDFS 207
>gi|388509350|gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 10/76 (13%)
Query: 53 EDIEDAFSYYGPIKNVWVAR-----NPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
ED+ FS++GPIK+V++ R NP GFGFV++ D DA DA DG+ + GR + V
Sbjct: 53 EDLHGPFSHFGPIKDVYLPRDYYTGNPRGFGFVQYVDPADAADAKYHLDGQILLGRELTV 112
Query: 108 EMS-----NPQKMRGR 118
+ P +MR R
Sbjct: 113 VFAEENRKKPAEMRAR 128
>gi|307219198|ref|NP_001182520.1| splicing factor, arginine/serine-rich 2B [Pongo abelii]
Length = 282
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTSP--DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|66911687|gb|AAH97003.1| Sfrs5b protein [Danio rerio]
Length = 164
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
S+ ++D+E F YG I+++ + R GFGFVEF+D RDAEDAV DG+E+ RV +E
Sbjct: 14 SAREKDVERFFKGYGRIRDIDLKR---GFGFVEFDDPRDAEDAVYELDGKELCNERVTIE 70
>gi|427777641|gb|JAA54272.1| Putative sf2 [Rhipicephalus pulchellus]
Length = 223
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+DIED F +G I + + R P F FVEF+D RDAEDAV+ DG + +G R+RVE
Sbjct: 22 KDIEDLFYKFGKITFIDLKNRRGPPFAFVEFDDPRDAEDAVQARDGYDYDGYRLRVEFP- 80
Query: 112 PQKMRGRSNGRSGGDRGYRGSVRARGRP 139
RG + G RG G R RG P
Sbjct: 81 ----RGSAPG-----RGSMGPGRGRGPP 99
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 23 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 82
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 83 EAMDGRMLDGRELRVQMA 100
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ V PP + FVEFE RDAEDA++G DG ++G R+RVE+
Sbjct: 20 EHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|145497457|ref|XP_001434717.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401845|emb|CAK67320.1| unnamed protein product [Paramecium tetraurelia]
Length = 191
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 23/121 (19%)
Query: 39 IYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGR 98
++V+ S ++D+ D F YG IK V + FV F + ++A++A++ +G+
Sbjct: 9 LFVAGYSRSKVQDEKDVRDIFKKYGAIKEVAYK---GSYSFVTFSNEQEAQEALKSTNGQ 65
Query: 99 EINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARD 158
NG++++V++ + +K GR G N +DKC++C GH+AR+
Sbjct: 66 TYNGQKLKVDVVDNRK------GRKTGP--------------NEEDKCFKCNKGGHWARN 105
Query: 159 C 159
C
Sbjct: 106 C 106
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 23 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 82
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 83 EAMDGRMLDGRELRVQMA 100
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|110737295|dbj|BAF00594.1| hypothetical protein [Arabidopsis thaliana]
Length = 261
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 22/147 (14%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAV 92
+YVS + S T DI FS +G + V V R G FV + R DA A
Sbjct: 58 TLYVSNL--DFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVPREDAAKAA 115
Query: 93 RGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGR 152
R D + +NGR++ V + D G S + R + +CYECG
Sbjct: 116 RSMDAKILNGRKLTVSI--------------AADNGL-ASEFIKKRVYKDKSRCYECGDE 160
Query: 153 GHYARDCRSRRSGGSGRPELCKINGRR 179
GH + +C + G RP K GRR
Sbjct: 161 GHLSYECPKNQLGPRERPPPPKKRGRR 187
>gi|348519914|ref|XP_003447474.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 279
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D+ D FS YGP+++V + +R GF FV FE+ DA++A
Sbjct: 119 LGVFGLSLYTTERDLRDVFSKYGPLEDVCIVYDQQSRRSRGFAFVYFENTDDAKEAKERA 178
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 179 NGMELDGRRIRVDFS 193
>gi|320169407|gb|EFW46306.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 200
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 49/111 (44%), Gaps = 33/111 (29%)
Query: 54 DIEDAFSYYG-----PIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
D+ED F YG IK V FGFVEFEDRRDAEDA+ +GR + G R+ VE
Sbjct: 16 DLEDIFQPYGRLVRCDIKGGAVY----SFGFVEFEDRRDAEDALNRENGRNVRGVRIAVE 71
Query: 109 MSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC 159
+ Q S D C+ C GH+A+DC
Sbjct: 72 WAKGQNRSADS------------------------DSCFRCNKPGHWAKDC 98
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 82 EAMDGRMLDGRELRVQMA 99
>gi|82540657|ref|XP_724630.1| splicing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23479337|gb|EAA16195.1| splicing factor, arginine/serine-rich 1 [Plasmodium yoelii yoelii]
Length = 309
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 30 MMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPG--FGFVEFEDRRD 87
M+I + IYV + +S D+E+ F +G I V + G F F+EFED RD
Sbjct: 1 MVIRDSVSRIYVGNLPSHVTS--RDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARD 58
Query: 88 AEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGR 138
A DA++ DG + G ++RVE+ + G+ N R G G RGS RGR
Sbjct: 59 AADAIKEKDGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG-RGSKSRRGR 108
>gi|28175406|gb|AAH45210.1| MGC52864 protein [Xenopus laevis]
Length = 460
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 10/157 (6%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+E+I + F YG + N V + + FV +A AV +GRE+NG+++ VE+
Sbjct: 12 TTQEEITELFERYGTVVNCAVMKQ---YAFVHMRGAEEATKAVEDLNGRELNGKKMLVEL 68
Query: 110 SNPQKMRGRSNGRSGGDRGYRGS-VRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
S P+ GS +R + F + EC YA +R S
Sbjct: 69 SKPRPQNTWKIFVGNVSSSCEGSEIR---KIFEEYGRVVECDIVKDYAFVHMTRESEARA 125
Query: 169 RPELC---KINGRRVRVEMSNPQKMRGRSNGRSGGDR 202
E +I G+R+ VEMS+ + G SNG S G R
Sbjct: 126 AIEALNGKEIKGKRINVEMSHKVQRSGTSNGSSHGRR 162
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S+S +I F YG + + ++ + FV +A A+ +G+EI G+R+
Sbjct: 84 VSSSCEGSEIRKIFEEYGRVVECDIVKD---YAFVHMTRESEARAAIEALNGKEIKGKRI 140
Query: 106 RVEMSNPQKMRGRSNGRSGGDR 127
VEMS+ + G SNG S G R
Sbjct: 141 NVEMSHKVQRSGTSNGSSHGRR 162
>gi|357445711|ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 491
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 32/133 (24%)
Query: 49 SSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAEDAVRGFDGREINGR 103
S++ ++DAF YG + V + GFGFV F+D+ E+A+ +G +++GR
Sbjct: 239 STSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDKEAMEEAIEAMNGIDLDGR 298
Query: 104 RVRVEMSNPQ---------------KMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYE 148
+ V+ + PQ + GG RG G +C++
Sbjct: 299 TITVDKAQPQGSRDDDDRHRERGRDSRDRNRSRDYGGSRGSNGG------------ECFK 346
Query: 149 CGGRGHYARDCRS 161
CG GH+AR+C S
Sbjct: 347 CGKPGHFARECPS 359
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 19 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 78
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 79 EAMDGRMLDGRELRVQMA 96
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|49204563|dbj|BAD24705.1| transformer-2b6 [Oryzias latipes]
Length = 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 20 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 79
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 80 NGMELDGRRIRVDFS 94
>gi|157278159|ref|NP_001098179.1| transformer 2b isoform 5 [Oryzias latipes]
gi|49204555|dbj|BAD24704.1| transformer-2b5 [Oryzias latipes]
Length = 183
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGF 95
+ + S +T+ D++D FS YGP+ +V + +R GF FV FE+ DA++A
Sbjct: 20 LGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKA 79
Query: 96 DGREINGRRVRVEMS 110
+G E++GRR+RV+ S
Sbjct: 80 NGMELDGRRIRVDFS 94
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 10/75 (13%)
Query: 54 DIEDAFSYYGPIKNVWV-----ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVE 108
D+ F YGP+ +V+V R P GF +V+FED RDAEDA+ D + I GR++ ++
Sbjct: 25 DLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQ 84
Query: 109 MS-----NPQKMRGR 118
+ P +M+G+
Sbjct: 85 FAQGDRKTPNQMKGK 99
>gi|30585341|gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gi|61371531|gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
gi|61371536|gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ V PP + FVEFE RDAEDA++G DG ++G R+RVE+
Sbjct: 20 EHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|15055543|ref|NP_115285.1| serine/arginine-rich splicing factor 8 [Homo sapiens]
gi|74761217|sp|Q9BRL6.1|SRSF8_HUMAN RecName: Full=Serine/arginine-rich splicing factor 8; AltName:
Full=Pre-mRNA-splicing factor SRP46; Short=Splicing
factor SRp46; AltName: Full=Splicing factor,
arginine/serine-rich 2B
gi|14141201|gb|AAK54350.1| SRp46 splicing factor [Homo sapiens]
gi|119587358|gb|EAW66954.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587359|gb|EAW66955.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|119587360|gb|EAW66956.1| Splicing factor, arginine/serine-rich, 46kD, isoform CRA_a [Homo
sapiens]
gi|189069077|dbj|BAG35415.1| unnamed protein product [Homo sapiens]
gi|193785751|dbj|BAG51186.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTSP--DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|332837526|ref|XP_001139465.2| PREDICTED: serine/arginine-rich splicing factor 8 isoform 1 [Pan
troglodytes]
gi|410045734|ref|XP_003952050.1| PREDICTED: serine/arginine-rich splicing factor 8 isoform 2 [Pan
troglodytes]
gi|410226370|gb|JAA10404.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410255620|gb|JAA15777.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410295516|gb|JAA26358.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348530|gb|JAA40869.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348532|gb|JAA40870.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
gi|410348534|gb|JAA40871.1| serine/arginine-rich splicing factor 8 [Pan troglodytes]
Length = 282
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTSP--DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|313227858|emb|CBY23007.1| unnamed protein product [Oikopleura dioica]
Length = 336
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS 110
D+EDAF +G IK + + GFGFVEF+D RDAEDA+ +G + G R+ VE++
Sbjct: 17 DVEDAFRKFGRIKEISL---KNGFGFVEFDDVRDAEDAIHEMNGERLCGDRITVELA 70
>gi|34784708|gb|AAH57783.1| SFRS2B protein [Homo sapiens]
Length = 275
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 13 MITLKVDNLTYRTSP--DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 71 AEAAMDGAELDGRELRVQVA 90
>gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens]
Length = 272
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 36 MLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPP-----GFGFVEFEDRRDAED 90
M+ + V + TS + + F YG + +V++ R P GF FV F DRRDA+D
Sbjct: 3 MITLKVDNLTYRTSP--DSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 60
Query: 91 AVRGFDGREINGRRVRVEMS 110
A DG E++GR +RV+++
Sbjct: 61 AEAAMDGAELDGRELRVQVA 80
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 52 KEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+ +IED F YG I ++ V PP + FVEFE RDAEDA++G DG ++G R+RVE+
Sbjct: 20 EHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGCRLRVEL 79
Query: 110 SN 111
++
Sbjct: 80 AH 81
>gi|68075657|ref|XP_679748.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56500569|emb|CAH96908.1| splicing factor, putative [Plasmodium berghei]
Length = 287
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 30 MMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPG--FGFVEFEDRRD 87
M+I + IYV + +S D+E+ F +G I V + G F F+EFED RD
Sbjct: 1 MVIRDSVSRIYVGNLPSHVTS--RDVENEFRKFGTILKCDVKKTVSGAAFAFIEFEDARD 58
Query: 88 AEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGR 138
A DA++ DG + G ++RVE+ + G+ N R G G RGS RGR
Sbjct: 59 AADAIKEKDGCDFGGNKLRVEVPFNARDNGKYNSRGRGMMG-RGSKSRRGR 108
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 7/77 (9%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNV-----WVARNPPGFGFVEFEDRRDAEDAV 92
++VS + TS +K +++ FS YGPIK + V P G+ F+EFE RD + A
Sbjct: 99 TLFVSRISYKTSESK--LKNEFSQYGPIKKIRLVTDQVTGKPKGYAFIEFEKERDMKIAY 156
Query: 93 RGFDGREINGRRVRVEM 109
+ DG++I+ RRV V++
Sbjct: 157 KQADGQKIDDRRVLVDI 173
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus rotundus]
Length = 278
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 41 VSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREI 100
V I + S+ ++D+E F YG I+++ + R GFGFVEFED RDA+DAV DG+E+
Sbjct: 6 VFIGRLNPSAREKDVERFFKGYGRIRDIDLKR---GFGFVEFEDPRDADDAVYELDGKEL 62
Query: 101 NGRRVRVE 108
RV +E
Sbjct: 63 CSERVTIE 70
>gi|357464165|ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
gi|355491412|gb|AES72615.1| RNA-binding protein [Medicago truncatula]
Length = 380
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 31 MIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVW--VARNPPGFGFVEFEDRRDA 88
M +R+ IYV + + +IED F YG I + V PP + FVEF++ RDA
Sbjct: 108 MSSRFSRTIYVGNLPADIRES--EIEDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDA 165
Query: 89 EDAVRGFDGREINGRRVRVEMSN 111
EDA+RG DG +G R+RVE+++
Sbjct: 166 EDAIRGRDGYNFDGCRLRVELAH 188
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F D+RDAEDA+
Sbjct: 24 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 83
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 84 EAMDGRMLDGRELRVQMA 101
>gi|156379214|ref|XP_001631353.1| predicted protein [Nematostella vectensis]
gi|156218392|gb|EDO39290.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 54 DIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQ 113
D+E YG I+++ + R G+GFVEF+D RDAEDAV +GR++ G RV VE S +
Sbjct: 17 DVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKGR 73
Query: 114 KMRG 117
+ G
Sbjct: 74 RSEG 77
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S+ ++ +D++D F YG + + G G VEFE + D A+ D E+ GRR+
Sbjct: 114 LSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTELGGRRI 173
Query: 106 RV 107
RV
Sbjct: 174 RV 175
>gi|354496140|ref|XP_003510185.1| PREDICTED: RNA-binding protein 4 [Cricetulus griseus]
gi|344250268|gb|EGW06372.1| RNA-binding protein 4 [Cricetulus griseus]
Length = 360
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 23/119 (19%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVR 106
S + T +++ F YGP+ + ++ + FV E DA +A+RG D E G+R+
Sbjct: 86 SPTCTNQELRAKFEEYGPVIECDIVKD---YAFVHMERAEDAVEAIRGLDNTEFQGKRMH 142
Query: 107 VEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSG 165
V++S + G G CY CG GH++++C RSG
Sbjct: 143 VQLSTSRLRTAPGMGDQSG--------------------CYRCGKEGHWSKECPVDRSG 181
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEM 109
+T+++I F YG + + +N +GFV ED+ AEDA+R +++G + VE
Sbjct: 13 ATEQEIRSLFEQYGKVLECDIIKN---YGFVHIEDKTAAEDAIRNLHHYKLHGVNINVEA 69
Query: 110 S-NPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDCRSRRSGGSG 168
S N K + + + +RA+ + P EC YA R
Sbjct: 70 SKNKSKASTKLHVGNISPTCTNQELRAKFEEYGP---VIECDIVKDYAFVHMERAEDAVE 126
Query: 169 R---PELCKINGRRVRVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECG 225
+ + G+R+ V++S + G G CY CG
Sbjct: 127 AIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQSG--------------------CYRCG 166
Query: 226 GRGHYARDCRSRRSG 240
GH++++C RSG
Sbjct: 167 KEGHWSKECPVDRSG 181
>gi|389609107|dbj|BAM18165.1| serine/arginine rich splicing factor [Papilio xuthus]
Length = 151
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAV 92
++ + + + +T ED+ F G + ++++ R+ GF FV F DRRDAEDA+
Sbjct: 1 MVSLKVDNLTYRTTAEDLRRVFERCGDVGDIYIPRDRYTRESRGFAFVRFFDRRDAEDAL 60
Query: 93 RGFDGREINGRRVRVEMS 110
DGR ++GR +RV+M+
Sbjct: 61 DSLDGRMLDGRELRVQMA 78
>gi|340506876|gb|EGR32928.1| splicing arginine serine-rich 4, putative [Ichthyophthirius
multifiliis]
Length = 243
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 28/119 (23%)
Query: 47 STSSTKEDIEDAFSYYGPIKNVWV-ARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRV 105
S + K D+E+ F YG +K + + A +GF+EF+D RDA+DA+ + E G+++
Sbjct: 31 SKDADKRDLENIFKKYGTVKEIKIKATGSNHYGFIEFQDHRDAKDALDDCNNMEFKGKQI 90
Query: 106 RVEMSNPQKMRGRSNGRSGGDRGYRGSVRARGRPFNPDDKCYECGGRGHYARDC-RSRR 163
R+E + K R R N C+ CG H +DC RSRR
Sbjct: 91 RLEFGHGGKRR-REN-------------------------CFNCGYSNHATKDCTRSRR 123
>gi|115843186|ref|XP_001198082.1| PREDICTED: serine/arginine-rich splicing factor 2-like
[Strongylocentrotus purpuratus]
Length = 141
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAVRGFDGREI 100
+ S+T ED+ F YG + ++++ R+ GF FV + D+RDAEDA+ DG
Sbjct: 21 LTYSTTPEDLRRCFEKYGEVGDIYIPRDKFSRESRGFAFVRYPDKRDAEDAMDSMDGNLY 80
Query: 101 NGRRVRVEMS 110
+GR++RV+M+
Sbjct: 81 DGRKLRVQMA 90
>gi|340372565|ref|XP_003384814.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Amphimedon
queenslandica]
Length = 169
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 38 VIYVSIVLCSTSSTKEDIEDAFSYYGPIKNVWVARNP-----PGFGFVEFEDRRDAEDAV 92
++ + + S T ++I+ F YG + ++++ R+P GF FV F ++RDAEDA+
Sbjct: 1 MVSLKVDNLSFRMTPDEIKPIFEKYGEVGDIYIPRDPYTKESRGFAFVRFYEKRDAEDAM 60
Query: 93 RGFDGREINGRRVRVEMS---NPQKMRGR 118
DG I+GR +RV+++ P + +GR
Sbjct: 61 ERLDGYVIDGREMRVQLARYGRPNENKGR 89
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 40 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 99
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 100 DGRQIRVDQAGKS-----SDNRS---RGYRG 122
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 50 STKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRR 104
+T ED+ F YG + +V++ R+ GF FV + D+RDAEDA+ DG ++GR
Sbjct: 25 TTPEDLRRCFEKYGDVGDVYIPRDRFTRESRGFAFVRYYDKRDAEDALDAMDGATLDGRE 84
Query: 105 VRVEMS 110
+RV+M+
Sbjct: 85 LRVQMA 90
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|391330558|ref|XP_003739725.1| PREDICTED: serine/arginine-rich splicing factor 1-like [Metaseiulus
occidentalis]
Length = 217
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSN 111
+DIED F YG I + + R P F FVEFED RDAEDAV DG + +G ++RVE
Sbjct: 21 KDIEDLFHKYGKITFIDLKNRRGPPFAFVEFEDPRDAEDAVSARDGYDYDGYKLRVEFPR 80
Query: 112 PQKMRGR 118
R R
Sbjct: 81 GNSARPR 87
>gi|195152782|ref|XP_002017315.1| GL22249 [Drosophila persimilis]
gi|198454070|ref|XP_001359460.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
gi|194112372|gb|EDW34415.1| GL22249 [Drosophila persimilis]
gi|198132637|gb|EAL28606.2| GA20008 [Drosophila pseudoobscura pseudoobscura]
Length = 263
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 53 EDIEDAFSYYGPIKNVWVA-RNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMS- 110
+DI+D F +G + V + R P F FVEFED RDA+DAV+ DG + +G R+RVE
Sbjct: 21 KDIQDLFHKFGKVTFVDLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDGYRLRVEFPR 80
Query: 111 --NPQKMRGRSNGRS 123
P RG N R+
Sbjct: 81 GGGPGSYRGNRNDRN 95
>gi|159470953|ref|XP_001693621.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283124|gb|EDP08875.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 286
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 53 EDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRV 107
ED+ F YG +K+V++ R+ P GFGF+EF++ RDAEDA+ D +NGR + V
Sbjct: 65 EDLRAKFEKYGELKDVYIPRDYYTQRPRGFGFIEFKETRDAEDAMYNLDRSVVNGREISV 124
Query: 108 EMS 110
S
Sbjct: 125 TFS 127
>gi|4502847|ref|NP_001271.1| cold-inducible RNA-binding protein [Homo sapiens]
gi|197102572|ref|NP_001124692.1| cold-inducible RNA-binding protein [Pongo abelii]
gi|386782231|ref|NP_001248245.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|397465267|ref|XP_003804430.1| PREDICTED: cold-inducible RNA-binding protein [Pan paniscus]
gi|426386441|ref|XP_004059693.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|5921786|sp|Q14011.1|CIRBP_HUMAN RecName: Full=Cold-inducible RNA-binding protein; AltName: Full=A18
hnRNP; AltName: Full=Glycine-rich RNA-binding protein
CIRP
gi|75070980|sp|Q5RF83.1|CIRBP_PONAB RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|1060893|dbj|BAA11212.1| CIRP [Homo sapiens]
gi|2541973|gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gi|2924760|gb|AAC04895.1| CIRP [Homo sapiens]
gi|12653269|gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
gi|12654167|gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gi|30583259|gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
gi|55725420|emb|CAH89574.1| hypothetical protein [Pongo abelii]
gi|60654971|gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
gi|67970531|dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gi|119589926|gb|EAW69520.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|119589929|gb|EAW69523.1| cold inducible RNA binding protein, isoform CRA_a [Homo sapiens]
gi|157928054|gb|ABW03323.1| cold inducible RNA binding protein [synthetic construct]
gi|157928769|gb|ABW03670.1| cold inducible RNA binding protein [synthetic construct]
gi|197692151|dbj|BAG70039.1| cold inducible RNA binding protein [Homo sapiens]
gi|197692397|dbj|BAG70162.1| cold inducible RNA binding protein [Homo sapiens]
gi|261860266|dbj|BAI46655.1| cold inducible RNA binding protein [synthetic construct]
gi|343958578|dbj|BAK63144.1| cold-inducible RNA-binding protein [Pan troglodytes]
gi|383415637|gb|AFH31032.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|384940732|gb|AFI33971.1| cold-inducible RNA-binding protein [Macaca mulatta]
gi|410224774|gb|JAA09606.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410260066|gb|JAA17999.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410289136|gb|JAA23168.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343217|gb|JAA40555.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343219|gb|JAA40556.1| cold inducible RNA binding protein [Pan troglodytes]
gi|410343223|gb|JAA40558.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 172
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 46 CSTSSTKEDIEDAFSYYGPIKNVWVARN-----PPGFGFVEFEDRRDAEDAVRGFDGREI 100
S + ++ +E FS YG I V V ++ GFGFV FE+ DA+DA+ +G+ +
Sbjct: 13 LSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Query: 101 NGRRVRVEMSNPQKMRGRSNGRSGGDRGYRG 131
+GR++RV+ + S+ RS RGYRG
Sbjct: 73 DGRQIRVDQAGKS-----SDNRS---RGYRG 95
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 11 KLLLCFSSLCQEAEIED-------PVMMIARYMLVIYVSIVLCSTSSTKEDIEDAFSYYG 63
KL C C E + + P + M V + S + + D+E F +G
Sbjct: 7 KLTACVPPFCDEFNLRESERGEFTPCSVPLFIMSSGRVYVGRLSYQARERDVERFFRGFG 66
Query: 64 PIKNVWVARNPPGFGFVEFEDRRDAEDAVRGFDGREINGRRVRVEMSNPQKMRGRSNGRS 123
I+ + + GFGFVEFED RDA+DAV +G+E+ G RV +E + RG + GR
Sbjct: 67 RIREINLKN---GFGFVEFEDYRDADDAVYELNGKELVGERVIIEHA-----RGPARGRD 118
Query: 124 GGDRGYR 130
GYR
Sbjct: 119 EYRYGYR 125
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,484,429,011
Number of Sequences: 23463169
Number of extensions: 252279585
Number of successful extensions: 732428
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5099
Number of HSP's successfully gapped in prelim test: 11169
Number of HSP's that attempted gapping in prelim test: 690055
Number of HSP's gapped (non-prelim): 38015
length of query: 312
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 170
effective length of database: 9,027,425,369
effective search space: 1534662312730
effective search space used: 1534662312730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)