Query psy10133
Match_columns 342
No_of_seqs 160 out of 1199
Neff 9.6
Searched_HMMs 46136
Date Fri Aug 16 18:42:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10133.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10133hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0154 GatA Asp-tRNAAsn/Glu-t 100.0 1.2E-62 2.6E-67 461.2 27.0 307 11-338 162-473 (475)
2 TIGR00132 gatA glutamyl-tRNA(G 100.0 1.2E-61 2.6E-66 458.7 30.4 315 12-331 145-460 (460)
3 PRK00012 gatA aspartyl/glutamy 100.0 1.6E-61 3.5E-66 457.8 29.9 315 11-329 144-459 (459)
4 PRK06169 putative amidase; Pro 100.0 1.7E-60 3.7E-65 450.8 29.9 303 11-341 161-465 (466)
5 PRK07235 amidase; Provisional 100.0 2.7E-60 5.8E-65 450.9 28.9 316 12-332 177-501 (502)
6 PRK08137 amidase; Provisional 100.0 6.3E-59 1.4E-63 443.5 30.7 312 12-341 168-492 (497)
7 PRK07042 amidase; Provisional 100.0 6.6E-59 1.4E-63 439.8 29.5 298 12-339 161-459 (464)
8 PRK07139 amidase; Provisional 100.0 1.3E-58 2.8E-63 433.8 30.9 307 12-333 126-434 (439)
9 PRK07487 amidase; Provisional 100.0 1.1E-58 2.4E-63 438.5 29.5 296 11-338 161-463 (469)
10 PRK07486 amidase; Provisional 100.0 1.3E-58 2.8E-63 440.1 29.1 299 12-335 167-474 (484)
11 PRK06102 hypothetical protein; 100.0 2.1E-58 4.7E-63 434.6 27.9 284 12-333 162-450 (452)
12 PRK07056 amidase; Provisional 100.0 2.1E-58 4.5E-63 435.0 27.6 283 12-333 166-452 (454)
13 PRK06170 amidase; Provisional 100.0 4E-58 8.7E-63 437.6 29.1 301 12-336 165-487 (490)
14 TIGR02715 amido_AtzE amidohydr 100.0 3.4E-58 7.4E-63 433.6 26.4 289 12-331 155-447 (452)
15 PRK08186 allophanate hydrolase 100.0 6.6E-58 1.4E-62 441.1 28.6 294 12-336 157-452 (600)
16 PRK09201 amidase; Provisional 100.0 4.4E-58 9.4E-63 434.0 26.7 291 12-333 162-456 (465)
17 PRK06061 amidase; Provisional 100.0 1.3E-57 2.7E-62 432.4 29.6 296 12-336 170-472 (483)
18 PRK05962 amidase; Validated 100.0 6.9E-58 1.5E-62 427.8 27.1 284 11-334 135-423 (424)
19 PRK07488 indole acetimide hydr 100.0 2.6E-57 5.7E-62 429.8 29.7 299 12-338 163-471 (472)
20 TIGR02713 allophanate_hyd allo 100.0 1.6E-57 3.4E-62 434.2 28.3 291 12-334 120-413 (561)
21 PRK12470 amidase; Provisional 100.0 7.8E-57 1.7E-61 424.7 28.3 291 12-337 161-457 (462)
22 PF01425 Amidase: Amidase; In 100.0 1E-57 2.2E-62 432.7 19.1 297 12-322 137-441 (441)
23 PRK06529 amidase; Provisional 100.0 3.5E-56 7.6E-61 423.2 29.3 298 12-331 153-477 (482)
24 PRK08310 amidase; Provisional 100.0 2.9E-56 6.3E-61 413.2 25.9 276 12-332 117-394 (395)
25 PRK07869 amidase; Provisional 100.0 1.7E-55 3.7E-60 417.3 28.1 298 12-336 163-466 (468)
26 PLN02722 indole-3-acetamide am 100.0 2.2E-55 4.8E-60 408.8 24.8 277 11-331 117-421 (422)
27 PRK06828 amidase; Provisional 100.0 3.1E-54 6.7E-59 407.5 29.8 296 12-340 178-490 (491)
28 PRK06707 amidase; Provisional 100.0 4.9E-53 1.1E-57 401.4 29.3 289 12-338 233-534 (536)
29 PRK11910 amidase; Provisional 100.0 7.5E-52 1.6E-56 392.5 29.2 282 11-339 323-613 (615)
30 KOG1211|consensus 100.0 2.2E-52 4.7E-57 382.4 13.2 316 11-330 171-493 (506)
31 PRK06565 amidase; Validated 100.0 1.4E-49 3E-54 374.5 23.7 323 12-338 168-560 (566)
32 KOG1212|consensus 100.0 3.9E-47 8.4E-52 351.0 22.4 310 14-339 211-559 (560)
33 COG3340 PepE Peptidase E [Amin 64.0 74 0.0016 27.0 8.8 43 109-154 32-74 (224)
34 COG1049 AcnB Aconitase B [Ener 58.2 4.2 9.1E-05 39.4 0.7 38 36-76 382-420 (852)
35 COG1797 CobB Cobyrinic acid a, 56.2 40 0.00086 31.9 6.6 36 107-150 243-279 (451)
36 PRK15468 carboxysome structura 44.2 64 0.0014 23.9 4.7 65 63-148 39-108 (111)
37 COG3603 Uncharacterized conser 43.7 18 0.00039 27.3 1.9 18 129-146 110-127 (128)
38 PF12965 DUF3854: Domain of un 39.7 1E+02 0.0022 23.9 5.7 43 109-152 70-112 (130)
39 PF00885 DMRL_synthase: 6,7-di 36.5 76 0.0016 25.1 4.6 44 108-154 2-48 (144)
40 PF03698 UPF0180: Uncharacteri 33.8 20 0.00044 25.1 0.8 20 131-150 10-29 (80)
41 COG1654 BirA Biotin operon rep 33.1 59 0.0013 22.8 3.1 22 128-149 33-54 (79)
42 PF14359 DUF4406: Domain of un 30.6 85 0.0018 22.6 3.7 24 124-147 11-34 (92)
43 PRK03094 hypothetical protein; 30.4 32 0.0007 24.1 1.4 20 131-150 10-29 (80)
44 PF06953 ArsD: Arsenical resis 30.4 2E+02 0.0044 22.0 5.9 33 122-155 21-53 (123)
45 PF07849 DUF1641: Protein of u 30.3 69 0.0015 19.3 2.7 20 123-142 21-40 (42)
46 PLN02404 6,7-dimethyl-8-ribity 28.0 1.8E+02 0.0039 22.9 5.3 43 107-152 5-50 (141)
47 PF10432 bact-PGI_C: Bacterial 25.3 3.5E+02 0.0076 21.5 7.1 58 108-168 71-128 (155)
48 PRK14569 D-alanyl-alanine synt 25.1 2E+02 0.0044 25.6 6.0 42 108-151 2-44 (296)
49 TIGR00825 EIIBC-GUT PTS system 24.9 26 0.00057 30.9 0.2 39 24-75 67-106 (331)
50 PF09383 NIL: NIL domain; Int 23.0 1.2E+02 0.0026 20.6 3.3 20 129-148 57-76 (76)
51 PF03612 EIIBC-GUT_N: Sorbitol 22.2 37 0.0008 27.8 0.6 37 24-73 67-103 (183)
52 PRK00061 ribH 6,7-dimethyl-8-r 21.9 2.5E+02 0.0055 22.4 5.3 43 107-152 10-55 (154)
53 PRK03437 3-isopropylmalate deh 20.8 2.2E+02 0.0048 26.2 5.3 39 108-149 3-43 (344)
54 PRK12359 flavodoxin FldB; Prov 20.7 3.3E+02 0.0071 22.2 5.8 43 105-147 75-117 (172)
No 1
>COG0154 GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-62 Score=461.21 Aligned_cols=307 Identities=42% Similarity=0.670 Sum_probs=241.6
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.||||+|++++|+|||||||||+|||||||||||||+||||+.|++|+++++|++|||||||+|+++++++|+|+|+.|.
T Consensus 162 AaAVAag~~~~alGSDtGGSIR~PAa~cGvvGlKPT~Grvsr~g~~~~a~sld~~GplartV~D~a~l~~v~~g~D~~d~ 241 (475)
T COG0154 162 AAAVAAGLVPLALGSDTGGSIRIPAAFCGLVGLKPTYGRVSRYGVVPLASSLDQIGPLARTVRDAALLLDVIAGPDPRDS 241 (475)
T ss_pred HHHHHhCCcchhcccCCCCchhhhhhhhCceeeCCCCCccCCCCCccccCCcCccCcccCCHHHHHHHHHHHcCCCCccc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred -CCccCCCCCcCccCCCCCCcEEEEeccCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcc--hhHHHHHHhHH
Q psy10133 91 -TTVQKNISPVTLDQLDLSRLVIGVPEEYKS-EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQS--SIVTYSILNQC 166 (342)
Q Consensus 91 -~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~-~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~--~~~~~~~~~~~ 166 (342)
.+.+.+..+ .....+++++|||++.++.. .+.++++.++++++++.|+++|++|+++++|.... ....|.
T Consensus 242 ~~~~~~~~~~-~~~~~~~~~lrigv~~~~~~~~~~~~~v~~~~~~a~~~l~~~Ga~v~~v~lp~~~~~~~~~~~~----- 315 (475)
T COG0154 242 PLPPPPPVPP-ALAGKDLKGLRIGVPKELGGGGPLDPDVRAAFEAAVKALEAAGAEVVEVSLPLLSDDYALAAYY----- 315 (475)
T ss_pred ccccccCccc-hhhccCCCCcEEEEECcccccCCCcHHHHHHHHHHHHHHHHCCCEEEeccCCchhhhhhhhHHH-----
Confidence 333222222 11146678899999998876 36788999999999999999999999999985432 222221
Q ss_pred HHHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHh
Q psy10133 167 EVASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWH 246 (342)
Q Consensus 167 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~ 246 (342)
+..+++..++.+.. . . +...+...+.+.++.|+..|...+....+...+.++.+ +.+++.+.++|
T Consensus 316 -----~~~~~~~~~~~~~~-~-----~-~~~~~~~~~~~~v~~ri~~G~~~~~~~~~~a~~~~~~~--~~i~~~~~~~f- 380 (475)
T COG0154 316 -----LARFDGERYGLRAA-D-----L-YGKTRAEGFGPEVKRRIMLGTYLLSAGYYDAYYRRAQK--TLIRRAFDKLF- 380 (475)
T ss_pred -----HHHhhhhhhhhcch-h-----h-hhhhhhhcccHHHHHHHhccccccchHHHHHHHHHHHH--HHHHHHHHHHH-
Confidence 22233333333211 0 0 33455677999999999999888763333333333222 44588899999
Q ss_pred cCCCEEEecCCCCCCCCcch-hhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHH
Q psy10133 247 SGVHALVTPTTLTTAPLVSQ-YIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLA 325 (342)
Q Consensus 247 ~~~D~li~Pt~~~~ap~~~~-~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a 325 (342)
+++|+||+||++.++|++++ ...............||.++|++|+|+++||+|++.+|||+||||+|++|+|..||++|
T Consensus 381 ~~~D~ll~Pt~~~~a~~ig~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlqlig~~~~d~~LL~~a 460 (475)
T COG0154 381 EEVDVLLTPTTPTPAPKIGESESDGDDPLEMYLLDVFTVPANLAGLPAISVPAGFTADGLPVGLQLIGPAFDDATLLRLA 460 (475)
T ss_pred HhCCEEEeCCCCCCCcccccccccccCHHHHhhhccccccccccCCCeEEeccCCCCCCCCeeEEEecCCCCHHHHHHHH
Confidence 78999999999999999987 21111222223344689999999999999999998889999999999999999999999
Q ss_pred HHHHHhcCCCccc
Q psy10133 326 HWLESQVEFNIEK 338 (342)
Q Consensus 326 ~~le~~~~~~~~~ 338 (342)
++||++++|+...
T Consensus 461 ~~~E~~~~~~~~~ 473 (475)
T COG0154 461 AALEQALGWHRRP 473 (475)
T ss_pred HHHHHhhCCCCCC
Confidence 9999999987654
No 2
>TIGR00132 gatA glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit. This orthology group is more narrowly defined here than in Proc Natl Acad Aci USA 94, 11819-11826 (1997). In particular, a Rhodococcus homolog found in association with nitrile hydratase genes and described as an enantiomer-selective amidase active on several 2-aryl propionamides, is excluded here. It is likely, however, that the amidase subunit GatA is not exclusively a part of the Glu-tRNA(Gln) amidotransferase heterotrimer and restricted to that function in all species.
Probab=100.00 E-value=1.2e-61 Score=458.72 Aligned_cols=315 Identities=41% Similarity=0.671 Sum_probs=252.7
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|.++.|+.
T Consensus 145 aaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~~~~d~~ 224 (460)
T TIGR00132 145 AAVAADLAPFSLGSDTGGSIRQPASFCGVVGFKPTYGRVSRYGLVAYASSLDQIGPFARTVEDIALLLDVISGHDKRDST 224 (460)
T ss_pred HHHHcCCCCeEeecCCCCcchhhhHhcCceeECCCCCcCCCCCCcCcccCCCcccCeeCCHHHHHHHHHHHcCCCCCCCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CccCCCCCcCcc-CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHHH
Q psy10133 92 TVQKNISPVTLD-QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVAS 170 (342)
Q Consensus 92 ~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~~ 170 (342)
+.+.|+.++... ..+.+++|||++.+++.. ++++++++++++++.|+++|++|+++++|........+..++..|...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~-~~~~v~~a~~~a~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~~ 303 (460)
T TIGR00132 225 SAKVPDPEFFEELKKDLKGLKVGVVKEFSEE-MDKEVQEKFENALEVLEELGAEIVEVSFPHVKYALPIYYIISPSEASS 303 (460)
T ss_pred ccCCCccchhhhhhcccCCCEEEEECccccc-CCHHHHHHHHHHHHHHHHCCCEEEEeCCCcHHHHHHHHHHHHHHHHHH
Confidence 765554333211 234678999999876543 799999999999999999999999999886554445556667778877
Q ss_pred HhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10133 171 NMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGVH 250 (342)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D 250 (342)
++..|++..++++.. ...+..+++...+...+.+.++.++..|...+.......+|.++++.|+.+++.+.++| +++|
T Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~-~~~D 381 (460)
T TIGR00132 304 NLARYDGIRYGYRIE-EPNSLKELYAKTRAEGFGEEVKRRIMLGNYALSAGYYDKYYLKAQKVRTLIIDDFLKLF-EEVD 381 (460)
T ss_pred HHhcccccccccccc-ccccHHHHHhhcchhhcCHHHHHHHHccccccccchhhHHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 777765443332211 12334455544444567788888887776555433344668889999999999999999 7899
Q ss_pred EEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHHH
Q psy10133 251 ALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLES 330 (342)
Q Consensus 251 ~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le~ 330 (342)
+||+|+++.+||+++..... .. .......||.++|++|+|+++||+|...+|+|+||||+|++|+|+.||++|+++|+
T Consensus 382 ~ll~Pt~~~~a~~~~~~~~~-~~-~~~~~~~~t~~~nl~g~PaisvP~g~~~~GlPvGlqlig~~~~D~~lL~~A~~le~ 459 (460)
T TIGR00132 382 VIVSPTAPTLPFKIGEKLDD-PL-EMYLSDILTVPANLAGLPAISVPCGVKEKGLPIGLQIIGKCFDDKTLLQVSYAFEQ 459 (460)
T ss_pred EEEeCCCCCCCCCcccccCc-hH-hhhcccceeccccccCCCcEEEecCcCCCCCCeeEEEECCCCchHHHHHHHHHHhh
Confidence 99999999999998753211 10 11112237999999999999999999889999999999999999999999999997
Q ss_pred h
Q psy10133 331 Q 331 (342)
Q Consensus 331 ~ 331 (342)
+
T Consensus 460 ~ 460 (460)
T TIGR00132 460 A 460 (460)
T ss_pred C
Confidence 3
No 3
>PRK00012 gatA aspartyl/glutamyl-tRNA amidotransferase subunit A; Reviewed
Probab=100.00 E-value=1.6e-61 Score=457.78 Aligned_cols=315 Identities=43% Similarity=0.665 Sum_probs=250.5
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.||||+|++++|+|||||||||+|||||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|.++.|+
T Consensus 144 AaaVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vp~~G~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~ 223 (459)
T PRK00012 144 AAAVAAGLAPAALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRYGLIAFASSLDQIGPFARTVEDAALLLNAIAGHDPKDS 223 (459)
T ss_pred HHHHHcCCCceEEeeCCCCccchhHHHcCceeecCCCCcccCCCCcCcccCCCcccCccCCHHHHHHHHHHHhCCCCCCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CCccCCCCCcCcc-CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHH
Q psy10133 91 TTVQKNISPVTLD-QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVA 169 (342)
Q Consensus 91 ~~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~ 169 (342)
.+.+.+..++... ..+.+++|||++.+++...++++++++++++++.|+++|++|+++++|........+..++..|..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 303 (459)
T PRK00012 224 TSADVPVPDYTAALGKDIKGLKIGVPKEYFGEGLDPEVKEAVEAAIKKLEDLGAEIVEVSLPHTKYALPAYYIIAPAEAS 303 (459)
T ss_pred ccccCCCCchhhhhcccccccEEEEEcccccccCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchHHHHHHHHHHHHHHHH
Confidence 7654332222111 234688999999877655689999999999999999999999999987655555556667777887
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
.++..|++..++++.. ....+.+++...+...+.+.++.++..|...+..+..+.+|.++++.|+.+++.|.++| +++
T Consensus 304 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~-~~~ 381 (459)
T PRK00012 304 SNLARYDGVRYGYRAE-DAKDLEEMYEKTRSEGFGEEVKRRIMLGTYVLSAGYYDAYYLKAQKVRTLIKQDFEKAF-EKV 381 (459)
T ss_pred HHHhhccccccccccc-ccccHHHHHhhhhhhccCHHHHHHHHhCcchhccccchHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 7777665433322211 12234445543444567788888888776554433344568888999999999999999 789
Q ss_pred CEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLE 329 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le 329 (342)
|+||+|+++.+||+++..... ... ......||.++|++|+|+++||+|++.+|+|+||||+|++|+|+.||++|+++|
T Consensus 382 D~ll~Pt~~~~a~~~~~~~~~-~~~-~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlvg~~~~D~~LL~~a~~~E 459 (459)
T PRK00012 382 DVILGPTAPTTAFKIGEKTDD-PLA-MYLSDIFTVPANLAGLPAISVPAGFDDGGLPVGLQLIGKYFDEETLLNVAYAFE 459 (459)
T ss_pred CEEEeCCCCCCCcccccccCc-hHh-hhccccccccccccCCCcEEEecCCCCCCCCEEEEEECCCCchHHHHHHHHHhC
Confidence 999999999999998753211 111 111223799999999999999999988899999999999999999999999986
No 4
>PRK06169 putative amidase; Provisional
Probab=100.00 E-value=1.7e-60 Score=450.84 Aligned_cols=303 Identities=24% Similarity=0.323 Sum_probs=243.3
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.||||+|++++|+|||||||||+|||||||||||||+||+|+.|+.|++ ++|++|||||||+|+++++++|.|++..|+
T Consensus 161 AaaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~vs~~g~~~~~-~~d~~Gp~arsv~D~~~~~~~l~g~~~~d~ 239 (466)
T PRK06169 161 AAAVALGMGPLSVGTDGGGSVRIPASFCGTFGFKPTFGRVPLYPASPFG-TLAHVGPMTRTVADAALLLDVIARPDARDW 239 (466)
T ss_pred HHHHHcCCCceeeecCCCCcchhchHhhCceeecCCCCccCCCCCCCCc-cccccCCeeCCHHHHHHHHHHhcCCCCCCC
Confidence 3689999999999999999999999999999999999999999998886 899999999999999999999999998888
Q ss_pred CCccCCCCCcCcc-CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHH
Q psy10133 91 TTVQKNISPVTLD-QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVA 169 (342)
Q Consensus 91 ~~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~ 169 (342)
.+.+.+..++... ..+.+++||||+.+++...++++++++++++++.|+++|++|++++++. ......+..++..+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~ 318 (466)
T PRK06169 240 SALPPPTTSFLDALDRDVRGLRIAYSPTLGYVDVDPEVAALVAQAVQRLAALGARVEEVDPGF-SDPVEAFHVLWFAGAA 318 (466)
T ss_pred cccCCCCcchhhhhccCCCCCEEEEECCcCCCCCCHHHHHHHHHHHHHHHHcCCEEEEeCCCc-chHHHHHHHHHHHHHH
Confidence 7665432222111 3456789999998777667899999999999999999999999988652 2233344444444444
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
..+..+. ..+...+.+.++.++..|..++. .+|.++++.|+.+++.|.++| +++
T Consensus 319 ~~~~~~~--------------------~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~-~~~ 372 (466)
T PRK06169 319 RLLRALP--------------------PGQRALLDPGLRRIAERGATYSA-----SDYLDATAVRAALGARMGAFH-ERY 372 (466)
T ss_pred HHHHHhh--------------------hcchhhcCHHHHHHHHhcccCCH-----HHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 3332211 11224577788888888876553 778899999999999999999 789
Q ss_pred CEEEecCCCCCCCCcchhhhcc-cccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLD-NREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWL 328 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~-~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~l 328 (342)
|+||+|+++.+||+++...... ..........||.++|++|+|+++||+|.+.+|||+||||+|++++|+.||++|+.+
T Consensus 373 D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQlvg~~~~d~~lL~~a~~l 452 (466)
T PRK06169 373 DLLLTPTLPIPAFEAGHDVPPGSGLTDWTQWTPFTYPFNLTQQPAASVPCGFTAAGLPVGLQIVGPRHSDDLVLRVARAY 452 (466)
T ss_pred CEEEeCCCCCCCCCCCccCCCccchhhhhhhhcccccccccCCCeEEEecCcCCCCCceEEEEecCCCcHHHHHHHHHHH
Confidence 9999999999999886521110 011111123489999999999999999998899999999999999999999999999
Q ss_pred HHhcCCCcccccc
Q psy10133 329 ESQVEFNIEKLLM 341 (342)
Q Consensus 329 e~~~~~~~~~~~~ 341 (342)
|+.++|..+++-|
T Consensus 453 e~~~~~~~~~p~~ 465 (466)
T PRK06169 453 EQALPWPHGAPAA 465 (466)
T ss_pred HhhcCcccCCCCC
Confidence 9999998777654
No 5
>PRK07235 amidase; Provisional
Probab=100.00 E-value=2.7e-60 Score=450.86 Aligned_cols=316 Identities=27% Similarity=0.354 Sum_probs=240.9
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|||||||||||+||+||||||||||+||||+.|++|++.++|++|||||||+|+++++++|.|+|..|+.
T Consensus 177 AaVAaG~v~~aiGtDtGGSIRiPAa~cGvvGlKPT~G~vp~~G~~~~~~sld~~Gpmarsv~D~a~ll~viag~d~~d~~ 256 (502)
T PRK07235 177 ALVAAGEVDMAIGGDQGGSIRIPSAWCGIYGMKPTHGLVPYTGAFPIERTIDHLGPMTATVRDNALLLEVIAGRDGLDPR 256 (502)
T ss_pred HHHHcCCCCeEEecCCCCCcCccHHHcCcceecCCCcccCCCCCCCcccccCeeeceeCCHHHHHHHHHHHcCCCCCCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCC-CcCcc-CCCCCCcEEEEeccCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHH
Q psy10133 92 TVQKNIS-PVTLD-QLDLSRLVIGVPEEYKS-EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEV 168 (342)
Q Consensus 92 ~~~~p~~-~~~~~-~~~~~~lrIg~~~~~~~-~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~ 168 (342)
+.+.++. ++... ..+.+++|||++.+++. ..++++|+++++++++.|+++|++|+++++|........|..+...+.
T Consensus 257 ~~~~~~~~~~~~~l~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~V~~v~~p~~~~~~~~~~~~~~~~~ 336 (502)
T PRK07235 257 QPAQPPVDDYTAALDRGVKGLKIGILREGFGLPNSEPEVDEAVRAAAKRLEDLGATVEEVSIPLHRLALAIWNPIATEGA 336 (502)
T ss_pred ccccCCccchhHHhccCCcCCEEEEeccccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhHHHHHHHHHHHHH
Confidence 7653322 22111 34568899999987543 468999999999999999999999999998865444444544333222
Q ss_pred HHHhhhhcccccCCcCCC-CCCChHHHH---HhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHH
Q psy10133 169 ASNMARYTGLFYGHRVTP-SVNSTDQLL---AETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRV 244 (342)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~ 244 (342)
... .+++..+++.... ......+.+ ...+...+.+.++.++..|..... .....+|.++++.|+.+++.+.++
T Consensus 337 ~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~y~~a~~~r~~~~~~~~~~ 413 (502)
T PRK07235 337 TAQ--MMLGNGYGFNWKGLYDTGLLDAFGAGWRERADDLSETVKLVMLLGQYGLE-RYHGRYYAKARNLARRLRAAYDEA 413 (502)
T ss_pred HHH--hhhccccccccccccchhHHHHHhhhhhcchhhcCHHHHHHHHhcccccc-cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 221 1233222211000 001111222 123345688889888887764321 223467899999999999999999
Q ss_pred HhcCCCEEEecCCCCCCCCcchhhhc-ccc-cccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHH
Q psy10133 245 WHSGVHALVTPTTLTTAPLVSQYIQL-DNR-EQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLL 322 (342)
Q Consensus 245 ~~~~~D~li~Pt~~~~ap~~~~~~~~-~~~-~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL 322 (342)
| +++|+||+||+|.+||+++..... ... ........||.+||++|+|+++||+|+ .+|||+|+||+|++|+|+.||
T Consensus 414 ~-~~~Dvll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PalsvP~g~-~~GlPvGlQlvg~~~~D~~lL 491 (502)
T PRK07235 414 L-RKYDLLVMPTTPMVATPLPAPDASREEYVSRALEMIANTAPFDVTGHPAMSVPCGL-VDGLPVGLMLVGRHFDEATIL 491 (502)
T ss_pred H-hcCCEEeeCCCCCCCCCcccccCchHHHHHHHHhhhccCccchhhCCCeEEEECCc-CCCCCeEEEEeCCCCCHHHHH
Confidence 9 789999999999999988642100 000 011113347999999999999999999 589999999999999999999
Q ss_pred HHHHHHHHhc
Q psy10133 323 NLAHWLESQV 332 (342)
Q Consensus 323 ~~a~~le~~~ 332 (342)
++|+++|++.
T Consensus 492 ~~A~~~E~~~ 501 (502)
T PRK07235 492 RAAAAFEASG 501 (502)
T ss_pred HHHHHHHhhh
Confidence 9999999865
No 6
>PRK08137 amidase; Provisional
Probab=100.00 E-value=6.3e-59 Score=443.50 Aligned_cols=312 Identities=28% Similarity=0.368 Sum_probs=242.6
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|+++.|+.
T Consensus 168 aAVAaG~~~~aiGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~ 247 (497)
T PRK08137 168 AAVAAGLAAVAIGTETDGSITCPAAINGLVGLKPTVGLVSRDGIVPISHSQDTAGPMTRTVADAAAVLTAIAGGDPADPA 247 (497)
T ss_pred HHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCceeCCCCCCcccccCcccCeeCCHHHHHHHHHHHhCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCcc----CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHH
Q psy10133 92 TVQKNISPVTLD----QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCE 167 (342)
Q Consensus 92 ~~~~p~~~~~~~----~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e 167 (342)
+.+.|+....+. ....+++||||+.+++ ..+++++++++++++.|+++|++|+++++|........+..++..|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~lrIgv~~~~~--~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~e 325 (497)
T PRK08137 248 TASAPAPAVDYVAALDADALRGARLGVARNYL--GYHPEVDAQFERALAELKAAGAVVIDVVDLDDGDWGEAEKVVLLHE 325 (497)
T ss_pred cccCCCCccchhhhccccccCCCEEEEEchhc--cCCHHHHHHHHHHHHHHHHCCCEEEeccCCchhhHHHHHHHHHHHH
Confidence 765543211111 1236789999998765 4799999999999999999999999998776544444556677778
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHHhhh------hhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHH--HH
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLAETR------KDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLI--AQ 239 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~--~~ 239 (342)
...++..+........ ....+.+++...+ ...+.+.++.++..+..++ ..+|.++++.++.. ++
T Consensus 326 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~~~~~~~~ 397 (497)
T PRK08137 326 FKAGLNAYLRSTAPHA---PVRTLADLIAFNRAQHAREMPYFGQELFEQAQAAPGLD-----DPAYLDALADAKRLAGPE 397 (497)
T ss_pred HHHHHHHHHHHhcCCC---CCCCHHHHHHHhhccchhhhcccCHHHHHHHHccCCCC-----HHHHHHHHHHHHHHHHHH
Confidence 8777766532110000 1233444443222 2456677777777666544 36677776644443 47
Q ss_pred HHHHHHh-cCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCCh
Q psy10133 240 DFLRVWH-SGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQD 318 (342)
Q Consensus 240 ~~~~~~~-~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D 318 (342)
.|.++|+ .++|+||+|+++ ++|+++.... . . ....+|.++|++|+|+++||+|+. +|||+||||+|++|+|
T Consensus 398 ~~~~~~~~~~~D~ll~Pt~~-~ap~~~~~~~-~----~-~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGvQlig~~~~d 469 (497)
T PRK08137 398 GIDAALKEHRLDALVAPTTG-PAWLIDLING-D----S-FGGSSSTPAAVAGYPHLTVPMGQV-QGLPVGLSFIGAAWSE 469 (497)
T ss_pred HHHHHHHhCCCCEEEeCCCC-CCcccccccc-c----c-cccccccccHhhCCCeEEEeCCCC-CCcCeEEEEECCCCCH
Confidence 8889993 279999999998 8888864211 1 1 112367899999999999999995 8999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCcccccc
Q psy10133 319 GLLLNLAHWLESQVEFNIEKLLM 341 (342)
Q Consensus 319 ~~LL~~a~~le~~~~~~~~~~~~ 341 (342)
+.||++|+++|+..+|+.+.++-
T Consensus 470 ~~LL~~a~~lE~~~~~~~~p~~~ 492 (497)
T PRK08137 470 ARLLELGYAYEQATHARREPRFV 492 (497)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCC
Confidence 99999999999999998766543
No 7
>PRK07042 amidase; Provisional
Probab=100.00 E-value=6.6e-59 Score=439.83 Aligned_cols=298 Identities=22% Similarity=0.265 Sum_probs=230.3
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|.. ++|++|||||||+|+++++++|.|+|+.|+.
T Consensus 161 aaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~Grv~~~g~~----~~d~~Gp~arsv~D~a~~l~vl~g~d~~d~~ 236 (464)
T PRK07042 161 AAAAAGYGPLHLGTDIGGSVRLPAGWCGIVGLKPSLGRIPIDPPY----TGRCAGPMTRTVDDAALLMSVLSRPDARDGT 236 (464)
T ss_pred HHHHcCCCceeeecCCCCccccchHhhCceeecCCCCccCCCCCc----cccccCCccCCHHHHHHHHHHhcCCCCCCcc
Confidence 689999999999999999999999999999999999999998853 3589999999999999999999999998887
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKS-EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVAS 170 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~-~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~~ 170 (342)
+.+.+..++.......+++||||+.+++. ..++++++++++++++.|+++|++|++++++........+..++..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (464)
T PRK07042 237 SLPPQDIDWSDLDIDVRGLRIGLMLDAGCGLAVDPEVRAAVEAAARRFEAAGAIVEPVPPFLTRAMLDGLDRFWRARLWS 316 (464)
T ss_pred ccCCCCcChhhhccCcCCCEEEEECcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCchhHHHHHHHHHHHHHHHHH
Confidence 66432111110023457899999977653 36899999999999999999999999987543322222222222222222
Q ss_pred HhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10133 171 NMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGVH 250 (342)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D 250 (342)
.+..+ . ..+...+.+.++.++..|..++. .+|.++...|+.+++.+.++| +++|
T Consensus 317 ~~~~~-------------------~-~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~~~~~~~~~~~~~-~~~D 370 (464)
T PRK07042 317 DLAAL-------------------P-PERRAKVLPYIRRWAEGGADLSG-----VEAVRGFNQTFAMRAAAARLF-AEFD 370 (464)
T ss_pred HHHHH-------------------h-hhhhhhcCHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 22111 1 11234567778888877766553 677888888889999999999 7899
Q ss_pred EEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHHH
Q psy10133 251 ALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLES 330 (342)
Q Consensus 251 ~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le~ 330 (342)
+||+||++.+||+++................||.+||++|+|+++||+|.+.+|||+||||+|++++|+.||++|+.+|+
T Consensus 371 ~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQlvg~~~~D~~lL~~a~~le~ 450 (464)
T PRK07042 371 YVLSPVAPVPAFPAEWASPTNDPARPFEHIAFTVPWNMSEQPAASINCGFTRDGLPIGLQIVGPRFDDLGVLRLAKAFEG 450 (464)
T ss_pred EEEcCCCCCCCCCcccccccccchhhhcccccccceeccCCCeEEeecCcCCCCCCeEEEEecCCCcHHHHHHHHHHHHH
Confidence 99999999999988642111111111123348999999999999999999889999999999999999999999999999
Q ss_pred hcCCCcccc
Q psy10133 331 QVEFNIEKL 339 (342)
Q Consensus 331 ~~~~~~~~~ 339 (342)
+++|+++++
T Consensus 451 ~~~~~~~~~ 459 (464)
T PRK07042 451 WRGPQRPWP 459 (464)
T ss_pred hccccccCC
Confidence 999988753
No 8
>PRK07139 amidase; Provisional
Probab=100.00 E-value=1.3e-58 Score=433.78 Aligned_cols=307 Identities=28% Similarity=0.507 Sum_probs=242.5
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+| +++|+|||||||||+|||||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|+++.|+.
T Consensus 126 AaVAag-~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~G~~p~~~sld~~Gp~arsv~D~a~~~~vl~g~d~~d~~ 204 (439)
T PRK07139 126 ATFNKN-ISFAIGSDTGDSVRLPASFIGKVGFKPSYGAISRYGLFAYASSLDTVAYFTHNVNDAIILSKVLFGKDENDLT 204 (439)
T ss_pred HHHHCC-CCEEEEcCCCcchhhhHHHcCeEEEeCCCCCcCCCCcccCcccCCccccccCCHHHHHHHHHHHcCCCcCCcc
Confidence 688887 6999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCC--cchhHHHHHHhHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHT--QSSIVTYSILNQCEVA 169 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~--~~~~~~~~~~~~~e~~ 169 (342)
+.+.++.. ....+++|||++..+ ..++++++++++++++.|+++|++|+++++|.. ......+..++..|..
T Consensus 205 ~~~~~~~~----~~~~~~lrig~~~~~--~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~ 278 (439)
T PRK07139 205 SVDVKINN----VKKTKPKKVAYLDCF--KELEEYVAKKYKKLINILKSENIEVEKIKIDEKLLKAIKPVYKIISYSEAS 278 (439)
T ss_pred ccccCccc----ccccCCCEEEEECcc--ccCCHHHHHHHHHHHHHHHHCCCEEEEeCCChhHHHHHHHHHHHHHHHHHH
Confidence 77655432 134577999997543 357999999999999999999999999987742 1122334445556666
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
.++.++.+..++... .....++++...+...+.+.++.++..|..++..+....+|.++++.|+.+++.|.++| +++
T Consensus 279 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~f-~~~ 355 (439)
T PRK07139 279 SNLANLNGIAFGNRE--KGSSWEEIMINTRSEGFGKMVQKRLILGSYFLEEENQEKYFLKAKKVRRVIKNYYESIH-NKF 355 (439)
T ss_pred HHHHhhccccccccc--ccccHHHHHHhcchhccCHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 666655433222211 12234455444455668888888988887655433334568889999999999999999 789
Q ss_pred CEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLE 329 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le 329 (342)
|+||+||++.+||+++..... . . ....++|.++|++|+|+++||+| ..+|||+||||+|++|+|..||++|+++|
T Consensus 356 D~ll~Pt~~~~ap~~~~~~~~-~--~-~~~~~~t~~~nl~G~PaisvP~g-~~~glPiGlqivg~~~~D~~LL~~A~~lE 430 (439)
T PRK07139 356 DIVIYPAYADIAPDIDENENK-S--D-NYMDYILTISNLVGNPSLSIPLG-KYNNLPFNLAIDSKIYDDEKLLSYSLYIE 430 (439)
T ss_pred CEEEeCCCCCCCCcccccccc-h--h-hhhhhcccCcccCCCCeEEEeCC-CCCCCCeEEEEECCCCChHHHHHHHHHHH
Confidence 999999999999988652100 0 0 11122478899999999999999 57899999999999999999999999999
Q ss_pred HhcC
Q psy10133 330 SQVE 333 (342)
Q Consensus 330 ~~~~ 333 (342)
+.++
T Consensus 431 ~~~~ 434 (439)
T PRK07139 431 ELIK 434 (439)
T ss_pred HHhc
Confidence 9875
No 9
>PRK07487 amidase; Provisional
Probab=100.00 E-value=1.1e-58 Score=438.47 Aligned_cols=296 Identities=21% Similarity=0.231 Sum_probs=233.5
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCccc----C-CCCCCccccCCCCHHHHHHHHHHHcCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIP----L-VNSMDVPGILTRTVEDCATVYNVIAGS 85 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p----~-~~~~d~~Gp~arsv~Dl~~~~~~l~g~ 85 (342)
.||||+|++++|+|||||||||+|||||||||||||+||||+.|+++ + +.++|++|||||||+|+++++++|.|+
T Consensus 161 AaAVAaG~~~~alGtDtgGSIRiPAa~cGvvGlKPT~G~is~~g~~~~~~~l~~~~~~~~Gplarsv~D~a~~~~~l~g~ 240 (469)
T PRK07487 161 AAAVAAGIGAIAHGTDIGGSIRYPAYACGVHGLRPTLGRVPAYNASSPERPIGAQLMSVQGPLARTVADLRLALAAMAAP 240 (469)
T ss_pred HHHHHcCCCceeeecCCCCccccchhhcCceeecCCCCccCCCCCCccccccccccccccCCeeCCHHHHHHHHHHHhCC
Confidence 37999999999999999999999999999999999999999999873 3 347899999999999999999999999
Q ss_pred CCCCCCCccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCCCcchhHHHHHHh
Q psy10133 86 DHRDPTTVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKV-SLPHTQSSIVTYSILN 164 (342)
Q Consensus 86 ~~~d~~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~-~~p~~~~~~~~~~~~~ 164 (342)
++.|+.+.+.++. .+.+++|||++.+++...++++++++++++++.|+++|++|+++ ++|........|..++
T Consensus 241 d~~d~~~~~~~~~------~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~ 314 (469)
T PRK07487 241 DPRDPWWVPAPLE------GPPRPKRVALCVRPDGLDVDPEVEAALRDAARRLEDAGWTVEEVDDTPPLREAAELQERLW 314 (469)
T ss_pred CCCCCccCCCCcc------CCCCCcEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCchHHHHHHHHHHH
Confidence 9988876654421 33578999999877666789999999999999999999999998 7776555555566666
Q ss_pred HHHHHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHH
Q psy10133 165 QCEVASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRV 244 (342)
Q Consensus 165 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~ 244 (342)
..|...++..+.. .. ....+.+.+...+..+..++ ..+|.++++.|+.+++.|.++
T Consensus 315 ~~e~~~~~~~~~~-~~------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~r~~~~~~~~~~ 370 (469)
T PRK07487 315 LGDGYEALLAAAE-AE------------------GDPGALAALRGQRAKARPLD-----LAGYMNALARRATLTRQWQLF 370 (469)
T ss_pred HHHHHHHHHHHHH-hh------------------chhhhhHHHHHHHHhccCCC-----HHHHHHHHHHHHHHHHHHHHH
Confidence 6676666543211 00 00112333333334444333 377889999999999999999
Q ss_pred HhcCCCEEEecCCCCCCCCcchhhh-cccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHH
Q psy10133 245 WHSGVHALVTPTTLTTAPLVSQYIQ-LDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLN 323 (342)
Q Consensus 245 ~~~~~D~li~Pt~~~~ap~~~~~~~-~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~ 323 (342)
| +++|+||+||++.+||+++.... ............+|.++|++|+|+++||+|.+ +|||+|+||+|++|+|+.||+
T Consensus 371 ~-~~~D~ll~Pt~p~~a~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~-~GlPvGlQlvg~~~~D~~lL~ 448 (469)
T PRK07487 371 F-EDYPLLLMPVSAELPFPDDLDRQGAEGFRRVWEAQLPQIALPFMGLPGLSVPTGLV-GGVPVGVQLVAGRFREDLCLA 448 (469)
T ss_pred H-hcCCEEEcCCCCCCCCCCCCcCCchhhhhHHHHhhcccccccccCCCeEEEECccC-CCcceeEEEeCCCCCHHHHHH
Confidence 9 78999999999999998864211 00111101112357789999999999999984 799999999999999999999
Q ss_pred HHHHHHHhcCCCccc
Q psy10133 324 LAHWLESQVEFNIEK 338 (342)
Q Consensus 324 ~a~~le~~~~~~~~~ 338 (342)
+|+++|+.++++++-
T Consensus 449 ~a~~lE~~~~~~~~~ 463 (469)
T PRK07487 449 AGEAIEARGGPPTPI 463 (469)
T ss_pred HHHHHHHhhCCCCcc
Confidence 999999999998764
No 10
>PRK07486 amidase; Provisional
Probab=100.00 E-value=1.3e-58 Score=440.05 Aligned_cols=299 Identities=25% Similarity=0.285 Sum_probs=231.2
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcc-cCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLI-PLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~-p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|.+ ++++++|++|||||||+|+++++++|.|+|+.|+
T Consensus 167 aaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~G~vs~~g~~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~ 246 (484)
T PRK07486 167 AALALRMLPVADGSDMMGSLRNPAAFNNVYGFRPSQGRVPHGPGGDVFVQQLGTEGPMGRTVEDVALLLAVQAGYDPRDP 246 (484)
T ss_pred HHHHcCCCceEeecCCCCCeecchhhhCceeecCCCCcccCCCCcccccccccccCCeeCCHHHHHHHHHHHhCCCCCCC
Confidence 799999999999999999999999999999999999999999865 7889999999999999999999999999999988
Q ss_pred CCccCCCCCcCcc-CCCCCCcEEEEeccCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCc-chhHHHHHHhHHH
Q psy10133 91 TTVQKNISPVTLD-QLDLSRLVIGVPEEYKS-EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQ-SSIVTYSILNQCE 167 (342)
Q Consensus 91 ~~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~-~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~-~~~~~~~~~~~~e 167 (342)
.+...+..++... ..+.+++||||+.+++. ..++++++++++++++.|+++|++|+++.++... .....+..+...+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~ 326 (484)
T PRK07486 247 LSLAEDPARFAQPLEADLRGKRIAWLGDWGGYLPMEAGVLELCEAALATLRELGCDVEAALPAFPPERLWRAWLTLRHFL 326 (484)
T ss_pred ccccCCCcchhhHhccCCCCCEEEEeCcccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCcchHHHHHHHHHHHHHH
Confidence 7654321111111 23567899999987654 3689999999999999999999999988765321 1122332222212
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHH-hhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHh
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLA-ETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWH 246 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~ 246 (342)
....+..+ +. ..+...+.+.++.++..|..++. .+|.++++.|+.+++.|.++|
T Consensus 327 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~- 381 (484)
T PRK07486 327 VGGSLLAL-------------------YRDPARRALLKPEAIWEIEGGLALTA-----AQVYEASVIRSAWYQALLRLF- 381 (484)
T ss_pred HHHhHHHH-------------------hccccchhhcCHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHH-
Confidence 11111110 00 11224567778888877776653 678889999999999999999
Q ss_pred cCCCEEEecCCCCCCCCcchhhh----cccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHH
Q psy10133 247 SGVHALVTPTTLTTAPLVSQYIQ----LDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLL 322 (342)
Q Consensus 247 ~~~D~li~Pt~~~~ap~~~~~~~----~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL 322 (342)
+++|+||+|+++.++|+++.... ............||.++|++|+|+++||+|.+.+|||+||||+|++|+|+.||
T Consensus 382 ~~~D~ll~Pt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~glPvGlQlvg~~~~D~~lL 461 (484)
T PRK07486 382 ERYDFLALPTAQVFPFDAEWRWPRAIAGRAMDTYHRWMEVVVPATLAGLPAISVPVGFNAAGLPMGMQIIGPPRADLAVL 461 (484)
T ss_pred hcCCEEEcCCCCCCCCccccccccccccchhhhhhhhhcccccccccCCCeEEEECCcCCCCCceEEEEECCCCCHHHHH
Confidence 78999999999999988754110 00001111122368899999999999999998899999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy10133 323 NLAHWLESQVEFN 335 (342)
Q Consensus 323 ~~a~~le~~~~~~ 335 (342)
++|+.+|+.++|+
T Consensus 462 ~~a~~le~~~~~~ 474 (484)
T PRK07486 462 QLAHAYEQATDWV 474 (484)
T ss_pred HHHHHHHhccCcc
Confidence 9999999999985
No 11
>PRK06102 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-58 Score=434.60 Aligned_cols=284 Identities=26% Similarity=0.318 Sum_probs=227.6
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|.++.|..
T Consensus 162 aaVAaG~~~~alGtDtgGSiRiPAa~cGv~G~KPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~a~~~~~l~g~~~~~~~ 241 (452)
T PRK06102 162 VAVAAGLVPVAMGTDTGGSVRIPAAFNGLVGYKATRGRYSMDGVFPLAKSLDSLGPLCRSVRDAVWIDAAMRGLTAPDVV 241 (452)
T ss_pred HHHHcCCCceEEecCCCCcchhhhHHhCceeEecCCCcccCCCCcccccccCcccCccCCHHHHHHHHHHHcCCCCcccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998654422
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhH---HHHHHhHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIV---TYSILNQCEV 168 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~---~~~~~~~~e~ 168 (342)
. .+.+++|||+..+++...++++++++++++++.|+++|++|+++++|....... .+..+...|.
T Consensus 242 ~------------~~~~~~ri~~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~e~ 309 (452)
T PRK06102 242 R------------RPLAGLRLVVPETVVFDDAEPGVRAAFEAAVERLQAAGALVERQAFPAFQEILDLIARHGWLVTAEA 309 (452)
T ss_pred c------------cCCCCCEEEEecchhcccCCHHHHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHHHHHHHHHHH
Confidence 1 224568999988766556899999999999999999999999998876433222 2223334454
Q ss_pred HHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy10133 169 ASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSG 248 (342)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~ 248 (342)
+..+..+. ...+...+.+.++.++..|..++. .+|.++++.|+.+++.|.++| +
T Consensus 310 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~-~- 363 (452)
T PRK06102 310 FALHQERL-------------------DGPDAARMDPRVVKRTRLGRKITA-----SDYIALLEARERLIAQVTREL-G- 363 (452)
T ss_pred HHHHHHHh-------------------hccchhhCCHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHH-c-
Confidence 44332211 011223467778888877776553 778899999999999999999 5
Q ss_pred CCEEEecCCCCCCCCcchhhhccc-ccc-cccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHH
Q psy10133 249 VHALVTPTTLTTAPLVSQYIQLDN-REQ-CSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAH 326 (342)
Q Consensus 249 ~D~li~Pt~~~~ap~~~~~~~~~~-~~~-~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~ 326 (342)
+|+||+||++.+||+++....... ... ......||.+||++|+|+++||+|.+.+|||+||||+|++|+|+.||++|+
T Consensus 364 ~D~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~~~~glPvGlQivg~~~~D~~lL~~a~ 443 (452)
T PRK06102 364 GALLATPTVAHVAPPLAPLEADDDLFFATNLKTLRNTMPGNFLDMCGVSLPCGTGAAGMPVGLLLSAPAGRDERLLRAAL 443 (452)
T ss_pred CCEEEeCCCCCCCCCccccccCchhhhhhhhhhhhcCccccccCCCeEEEecCCCCCCCCEEEEEECCCCCHHHHHHHHH
Confidence 899999999999998865311111 000 111224799999999999999999988999999999999999999999999
Q ss_pred HHHHhcC
Q psy10133 327 WLESQVE 333 (342)
Q Consensus 327 ~le~~~~ 333 (342)
.+|++++
T Consensus 444 ~le~~l~ 450 (452)
T PRK06102 444 AVEAVIR 450 (452)
T ss_pred HHHHHhc
Confidence 9999874
No 12
>PRK07056 amidase; Provisional
Probab=100.00 E-value=2.1e-58 Score=434.96 Aligned_cols=283 Identities=27% Similarity=0.367 Sum_probs=228.9
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.+.++.|+.
T Consensus 166 aaVAag~~~~alGtDtgGSIRiPAa~cGv~GlKPT~G~vs~~G~~~~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~d~~ 245 (454)
T PRK07056 166 VSVADGMAAAALGTDTGGSIRIPAALCGLTGFKPTARRVPLQGAVPLSTTLDSIGPLARSVACCALVDAVLAGEEPVVPA 245 (454)
T ss_pred HHHHcCCCceEEeeCCCCccccchHhhCceeeccCCCccCCCCcccCccccCcccCccCCHHHHHHHHHHhcCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999998877653
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHH--HHHhHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTY--SILNQCEVA 169 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~--~~~~~~e~~ 169 (342)
. .+.+++||||+.+++...++++++++++++++.|+++|++|+++++|........+ ..++..|.+
T Consensus 246 ~------------~~~~~lrig~~~~~~~~~~~~~v~~~~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~e~~ 313 (454)
T PRK07056 246 A------------RPLEGLRLAVPTTVVLDGLDATVAAAFERALKRLSAAGAIIEEIAFPELAELAEINAKGGFSAAESY 313 (454)
T ss_pred c------------ccccCcEEEEcchhhccCCCHHHHHHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhhhHHHHHHH
Confidence 2 23467999999876655689999999999999999999999999987643322221 123333433
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
..+.. ++ ..+...+.+.++.++..|..++. .+|.++++.|+.+++.|.++| +++
T Consensus 314 ~~~~~-------------------~~-~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~-~~~ 367 (454)
T PRK07056 314 AWHRP-------------------LL-ARHRDQYDPRVAARILRGEPMSA-----ADYIDLLAARAAWIARAAARL-ARF 367 (454)
T ss_pred HHHHH-------------------HH-hhhhhhCCHHHHHHHHcCCCCCH-----HHHHHHHHHHHHHHHHHHHHH-ccC
Confidence 32221 11 12335677888888888876553 678889999999999999999 799
Q ss_pred CEEEecCCCCCCCCcchhhhcc-cc-cccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLD-NR-EQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHW 327 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~-~~-~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~ 327 (342)
|+||+|+++.+||++++..... .. ........||.+||++|+|+++||+|. .+|+|+||||+|++++|+.||++|++
T Consensus 368 D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~g~PaisvP~g~-~~glPvGlqivg~~~~D~~lL~~a~~ 446 (454)
T PRK07056 368 DALVMPTVPIVPPRIADLEADDAAFFRTNALLLRNPSLINFLDGCALSLPCHA-PGEAPVGLMLAGAPGRDDRLLAIALA 446 (454)
T ss_pred CEEEECCCCCCCCCcccccccchhhHHHHHHHhhcCccchhcCCCEEEEeCCC-CCCCCEEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999986531000 00 001112237999999999999999996 67999999999999999999999999
Q ss_pred HHHhcC
Q psy10133 328 LESQVE 333 (342)
Q Consensus 328 le~~~~ 333 (342)
+|+.++
T Consensus 447 le~~l~ 452 (454)
T PRK07056 447 VEAVLR 452 (454)
T ss_pred HHHHhc
Confidence 999873
No 13
>PRK06170 amidase; Provisional
Probab=100.00 E-value=4e-58 Score=437.65 Aligned_cols=301 Identities=28% Similarity=0.333 Sum_probs=226.6
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCccc-----C--CCCCCccccCCCCHHHHHHHHHHHcC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIP-----L--VNSMDVPGILTRTVEDCATVYNVIAG 84 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p-----~--~~~~d~~Gp~arsv~Dl~~~~~~l~g 84 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|++| + +.++|++|||||||+|+++++++|.|
T Consensus 165 aAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~Grv~~~G~~~~~~~~~~~~~~~d~~Gp~arsv~D~a~~l~~l~g 244 (490)
T PRK06170 165 AALAAGFGALSIGSDIGGSLRVPAHYCGVYAHKPTLGLVPLRGHIPPPAPALPGQADLAVAGPMARSARDLALLLDVMAG 244 (490)
T ss_pred HHHHcCCCceeeecCCCCccccChHHhCceeecCCCCcCcCCCcCCccccccccccccccccCccCCHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999999999999988 4 34689999999999999999999999
Q ss_pred CCCCCCC---CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEec--CCCCcchhHH
Q psy10133 85 SDHRDPT---TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVS--LPHTQSSIVT 159 (342)
Q Consensus 85 ~~~~d~~---~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~--~p~~~~~~~~ 159 (342)
+++.|+. ....|.. ...+.+++|||++.+++...++++++++++++++.|+++|++|++++ ++........
T Consensus 245 ~d~~d~~~~~~~~~~~~----~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~ 320 (490)
T PRK06170 245 PDPLDGGVAYRLALPPA----RHGRLKDFRVLVLDEHPLLPTDAAVRAAIERLAAALADAGARVVRHSPLLPDLAESARL 320 (490)
T ss_pred CCccccccccccCCCcc----cccccCCCEEEEECCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEEcCCCCCchHHHHHH
Confidence 9887743 1111110 02345789999998876667899999999999999999999999986 3333333344
Q ss_pred HHHHhHHHHHHHhhhhcccccCCcCCCCCCChHHHHHh-hhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHH
Q psy10133 160 YSILNQCEVASNMARYTGLFYGHRVTPSVNSTDQLLAE-TRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIA 238 (342)
Q Consensus 160 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~ 238 (342)
|..++..+....+... ..++.... .....+.+.++.++..+..++ ..+|.++++.|+.++
T Consensus 321 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~a~~~r~~~~ 381 (490)
T PRK06170 321 YMRLLFAASAARFPPD--------------AYADAQARAAGLSADDRSLAAERLRGAVLS-----HRDWLFADAAREELR 381 (490)
T ss_pred HHHHHHHHHhhccchh--------------HHHHhhhccccccchhHHHHHHHhccccCC-----HHHHHHHHHHHHHHH
Confidence 4444433332221100 00000000 011224445555666665544 377889999999999
Q ss_pred HHHHHHHhcCCCEEEecCCCCCCCCcchhhhc-------cccc-ccccccccccCCCCCCCCeEEecCCCCCCCCceeEE
Q psy10133 239 QDFLRVWHSGVHALVTPTTLTTAPLVSQYIQL-------DNRE-QCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQ 310 (342)
Q Consensus 239 ~~~~~~~~~~~D~li~Pt~~~~ap~~~~~~~~-------~~~~-~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiq 310 (342)
+.|.++| +++|+||+|+++.+||+++..... +... .......||.++|++|+|+++||+|++.+|||+|||
T Consensus 382 ~~~~~~~-~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQ 460 (490)
T PRK06170 382 AAWRRFF-AEFDVVLCPVTPTPAFPHDHAPDPLERRIDIDGVSYPYWDQLVWAGLATLPGLPATAIPIGLSATGLPVGVQ 460 (490)
T ss_pred HHHHHHH-hcCCEEEeCCCCCCCCCCCccccccccccccCCcccchhhhhhhcceecccCCCeEEEECCcCCCCCceeEE
Confidence 9999999 789999999999999998653110 0000 001112478999999999999999998899999999
Q ss_pred EecCCCChHHHHHHHHHHHHhcC-CCc
Q psy10133 311 LMAPNFQDGLLLNLAHWLESQVE-FNI 336 (342)
Q Consensus 311 lvg~~~~D~~LL~~a~~le~~~~-~~~ 336 (342)
|+|++|+|+.||++|+.+|+.++ |..
T Consensus 461 lig~~~~D~~LL~~a~~lE~~~~~~~~ 487 (490)
T PRK06170 461 IVGPALEDRTPLRLAELLEEEFGGFRP 487 (490)
T ss_pred EecCCCCHHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999854 543
No 14
>TIGR02715 amido_AtzE amidohydrolase, AtzE family. Members of this protein family are aminohydrolases related to, but distinct from, glutamyl-tRNA(Gln) amidotransferase subunit A. The best characterized member is the biuret hydrolase of Pseudomonas sp. ADP, which hydrolyzes ammonia from the three-nitrogen compound biuret to yield allophanate. Allophanate is also an intermediate in urea degradation by the urea carboxylase/allophanate hydrolase pathway, an alternative to urease.
Probab=100.00 E-value=3.4e-58 Score=433.62 Aligned_cols=289 Identities=31% Similarity=0.498 Sum_probs=228.9
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|+++.|+.
T Consensus 155 aaVAag~~~~alGtDtgGSiRiPAa~cGv~GlKPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~~~~d~~ 234 (452)
T TIGR02715 155 AAVAAGLVPFSLGSDTNGSIRVPASLCGVFGLKPTYGRLSRQGVFPFVASLDHVGPFARSVEDLALAYDVMQGPDPQDPF 234 (452)
T ss_pred HHHHCCCCceEEeeCCCCcchhhHHHhCceeeeCCCCCccCCCCCCCccccCcccCeeCCHHHHHHHHHHhcCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCcc-CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHHH
Q psy10133 92 TVQKNISPVTLD-QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVAS 170 (342)
Q Consensus 92 ~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~~ 170 (342)
+.+.|+.++... ..+.+++||||+.+++....+++++++++++++.|+.. +++++|........+..++..|...
T Consensus 235 ~~~~p~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~----~~v~~~~~~~~~~~~~~~~~~e~~~ 310 (452)
T TIGR02715 235 CTDRPAEPTVPLLPAGISGLRIAVLGGWFQQNADPEALAAVGRVAKALGAT----TIVELPDAERARAAAFVITASEGGN 310 (452)
T ss_pred cccCCCcchhhhhhcCCCCCEEEEECccccCCCCHHHHHHHHHHHHhcCCe----eeecCCchHHHHHHHHHHHHHHHHH
Confidence 776665432111 23467899999987765568999999999999988543 2344554333333344445555444
Q ss_pred HhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10133 171 NMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGVH 250 (342)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D 250 (342)
.+..+ + ..+.+.+.+.++.++..|..++ ..+|.++++.|+.+++.|.++| +++|
T Consensus 311 ~~~~~-------------------~-~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~a~~~r~~~~~~~~~~~-~~~D 364 (452)
T TIGR02715 311 LHLDA-------------------L-RTRPQDFDPATRDRLLAGALLP-----ASWYAQAQRFRHWFRDAIRELF-QRVD 364 (452)
T ss_pred HHHHH-------------------h-hhchhhcCHHHHHHHHcccCCC-----HHHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 33211 1 1223457788888888887655 3778899999999999999999 7899
Q ss_pred EEEecCCCCCCCCcchhhh-ccc--ccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHH
Q psy10133 251 ALVTPTTLTTAPLVSQYIQ-LDN--REQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHW 327 (342)
Q Consensus 251 ~li~Pt~~~~ap~~~~~~~-~~~--~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~ 327 (342)
+||+|+++.+||+++.... .+. .........||.+||++|+|+++||+|. .+|||+|+||+|++++|+.||++|++
T Consensus 365 vll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~glPvGlQivg~~~~D~~lL~~a~~ 443 (452)
T TIGR02715 365 VLIAPATPCSAPLIGQETMIIDGVPVPVRANLGIFTQPISFAGLPVLAAPLPR-PGRLPIGVQLIAAPWREDLCLRAAAV 443 (452)
T ss_pred EEEeCCCCCCCCcCcccccccCccchhhhhhHHhcCccchhcCCCeEEEeCCC-CCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999865210 011 0111112248999999999999999998 68999999999999999999999999
Q ss_pred HHHh
Q psy10133 328 LESQ 331 (342)
Q Consensus 328 le~~ 331 (342)
+|+.
T Consensus 444 le~~ 447 (452)
T TIGR02715 444 LERQ 447 (452)
T ss_pred HHHh
Confidence 9985
No 15
>PRK08186 allophanate hydrolase; Provisional
Probab=100.00 E-value=6.6e-58 Score=441.07 Aligned_cols=294 Identities=26% Similarity=0.353 Sum_probs=236.2
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|+++||||||||||||+||+||||||||||+||+|+.|++|++.++|++|||||||+|+++++++|.|.|+.|+.
T Consensus 157 aAVAaG~~~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vGp~Arsv~D~~~~l~vl~g~d~~D~~ 236 (600)
T PRK08186 157 VAVALGLVSFALGTDTAGSGRVPAAFNNIVGLKPTLGLLSTRGVVPACRTLDCVSVFALTVDDADAVLAVMAGFDPADPY 236 (600)
T ss_pred HHHHcCCcceEeeecCCCcchhhhHHhCceEEeCCCCcccCCCcccccccCCceecccCCHHHHHHHHHHhcCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCC-CCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcc-hhHHHHHHhHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYK-SEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQS-SIVTYSILNQCEVA 169 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~-~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~-~~~~~~~~~~~e~~ 169 (342)
+.+.|+.. .....+++|||++.+.. ....+++++++++++++.|+++|++|+++++|.... ....|...+..|.+
T Consensus 237 s~~~p~~~---~~~~~~~lrIgv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~ei~~~~~~~~~~~~~~~~~~ae~~ 313 (600)
T PRK08186 237 SRANPADA---PAALPAGPRVGVPRAAQLEFFGDAEAEAAFAAALARLEALGAELVEIDFSPFLEAARLLYEGPWVAERY 313 (600)
T ss_pred cccCCccc---ccccCCCCEEEEEcchhccccCCHHHHHHHHHHHHHHHHcCCeEEEecchhHHHHHHHHHHHHHHHHHH
Confidence 77655321 12235679999986422 122589999999999999999999999999876432 23344444555554
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
..+..+ + ..+...+.+.++.++..|..++. .+|.++++.|+.+++.+.++| .++
T Consensus 314 ~~~~~~-------------------~-~~~~~~~~p~~~~~i~~g~~~sa-----~~~~~a~~~r~~l~~~~~~~~-~~~ 367 (600)
T PRK08186 314 AAVGEF-------------------L-EAHPDAVDPVVRGIIAGAAAFSA-----ADAFRALYRLAELRRAAEAVL-AGI 367 (600)
T ss_pred HHHHHH-------------------H-hhChhhcCHHHHHHHHhCcCCCH-----HHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 443322 1 12234577788888887776654 778889999999999999999 799
Q ss_pred CEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLE 329 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le 329 (342)
|+||+||+|.+++ +.+.. .+....+.....||.++|++|+|+++||+|+..+|||+||||+|++|+|+.||++|+.+|
T Consensus 368 D~Ll~Pt~p~~~~-~~~~~-~~~~~~~~~~~~yT~~~Nl~glPAisvP~g~~~~GlPvGvqlig~~~~D~~LL~~A~~le 445 (600)
T PRK08186 368 DALLVPTAPTHPT-IAEVA-ADPIGLNSRLGTYTNFVNLLDLCALAVPAGFRADGLPFGVTLIAPAFADQALADLAARLQ 445 (600)
T ss_pred CEEEeCCCCCCCC-chhhc-CCchhhhhhhhhccccccccCCCeEEEecccCCCCCCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999874 33321 111111122334899999999999999999988999999999999999999999999999
Q ss_pred HhcCCCc
Q psy10133 330 SQVEFNI 336 (342)
Q Consensus 330 ~~~~~~~ 336 (342)
+.++|+.
T Consensus 446 ~~~~~~~ 452 (600)
T PRK08186 446 AALALPL 452 (600)
T ss_pred hhccccc
Confidence 9988743
No 16
>PRK09201 amidase; Provisional
Probab=100.00 E-value=4.4e-58 Score=433.98 Aligned_cols=291 Identities=31% Similarity=0.471 Sum_probs=231.5
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|++|++.++|++|||||||+|+++++++|.|+++.|+.
T Consensus 162 aaVAaG~~~~alGtDtgGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~s~d~~Gp~arsv~D~a~~l~~l~g~d~~d~~ 241 (465)
T PRK09201 162 AAVAAGLVPFTLGSDTNGSIRVPASLCGIFGLKPTYGRLSRAGSFPFVASLDHIGPFARSVADLALVYDVLQGPDPQDPF 241 (465)
T ss_pred HHHHcCCCceEEecCCCCcchhhhHHhCceeeeCCCCccCCCCCCCcccccCcccCccCCHHHHHHHHHHhcCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCcc-CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHHH
Q psy10133 92 TVQKNISPVTLD-QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVAS 170 (342)
Q Consensus 92 ~~~~p~~~~~~~-~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~~ 170 (342)
+.+.|+..+... ..+.+++||||+.+++...++++++++++++++.|+.. +++++|........+..+...|...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~----~~v~~~~~~~~~~~~~~~~~~e~~~ 317 (465)
T PRK09201 242 QADRPAEPTAPLLDRGAEGLRIAVLGGYFAQWADPEARAAVDRVAKALGAT----REVELPEAARARAAAFIITASEGGN 317 (465)
T ss_pred cccCCCcchhhhhccCCCCCEEEEECccccCCCCHHHHHHHHHHHHHccCc----eeecCCchhHHHHHHHHHHHHHHHH
Confidence 776665432111 33467899999987765568999999999999998643 2344554433333344455555554
Q ss_pred HhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy10133 171 NMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGVH 250 (342)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~D 250 (342)
.+..+ + ..+.+.+.+.++.++..|..++ ..+|.++++.|+.+++.|.++| +++|
T Consensus 318 ~~~~~-------------------~-~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~a~~~r~~~~~~~~~~~-~~~D 371 (465)
T PRK09201 318 LHLPA-------------------L-RTRPQDFDPASRDRLLAGAMLP-----AAWYVQAQRFRRWFRQAVLELF-EHVD 371 (465)
T ss_pred HHHHH-------------------H-hhhhhhcCHHHHHHHHhhcCCC-----HHHHHHHHHHHHHHHHHHHHHH-hcCC
Confidence 33221 1 1223457788888888887655 3778999999999999999999 7899
Q ss_pred EEEecCCCCCCCCcchhhh---cccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHH
Q psy10133 251 ALVTPTTLTTAPLVSQYIQ---LDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHW 327 (342)
Q Consensus 251 ~li~Pt~~~~ap~~~~~~~---~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~ 327 (342)
+||+|+++.++|+++.... ............||.+||++|+|+++||+|. .+|||+||||+|++|+|+.||++|+.
T Consensus 372 ~ll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~-~~GlPvGlQivg~~~~D~~lL~~A~~ 450 (465)
T PRK09201 372 VLIAPATPCSAPLIGQETMRIDGVELPVRANLGILTQPISFIGLPVVAVPLRT-PGGLPIGVQLIAAPWREDLALRAAAA 450 (465)
T ss_pred EEEeCCCCCCCCcccccccccCcchhhhhhhHHHhCccccccCCCeEEEeCCC-CCCcCeEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999875311 0011111112348999999999999999996 67999999999999999999999999
Q ss_pred HHHhcC
Q psy10133 328 LESQVE 333 (342)
Q Consensus 328 le~~~~ 333 (342)
+|++-.
T Consensus 451 le~~~~ 456 (465)
T PRK09201 451 LEQQGV 456 (465)
T ss_pred HHhhCc
Confidence 998654
No 17
>PRK06061 amidase; Provisional
Probab=100.00 E-value=1.3e-57 Score=432.39 Aligned_cols=296 Identities=22% Similarity=0.257 Sum_probs=228.8
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+||+||||||||||+||||+.|+.+.+.++|++|||||||+|+++++++|.|+++.|+.
T Consensus 170 aAVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~ 249 (483)
T PRK06061 170 AAVAAGLVTAAIGSDGAGSVRIPAAWTHLVGIKPQRGRISTWPLPEAFNGLTVNGPLARTVADAALLLDAASGNHPGDRH 249 (483)
T ss_pred HHHHcCCCceEeecCCCCcchhchhhcCceeecCCCCccCCCCCCcccccCceeCCEeCCHHHHHHHHHHHhCCCCCCCc
Confidence 68999999999999999999999999999999999999999999998889999999999999999999999999988876
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCC----CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKS----EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCE 167 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~----~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e 167 (342)
+.+.+... .......+++|||++.++.. ..++++++++++++++.|+++|++|++++++..... . . ....+
T Consensus 250 ~~~~~~~~-~~~~~~~~~lrig~~~~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~-~-~--~~~~~ 324 (483)
T PRK06061 250 RPPPVTVS-DAVGRAPGPLRIALSTRFPFTGFPAKLHPEIRAAVRRVAEQLALLGHTVVPADPDYGLRL-G-L--NFLPR 324 (483)
T ss_pred ccCCccch-hhhccCCCCcEEEEECCccccccccCCCHHHHHHHHHHHHHHHHCCCEEEEeCCchhhHH-H-H--HHHHH
Confidence 53322100 00023457899999876532 357999999999999999999999998874322111 0 0 01111
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHS 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~ 247 (342)
....+..+.. . ..+...+.+.++.++..|..++. .+|.++++.|+.+++.|.++| +
T Consensus 325 ~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~-~ 380 (483)
T PRK06061 325 STAGLRDWAE---------------R---LGDPVLLDPRTVSNARMGRLLSQ-----AILRLARAAEAAAQRRVGSIF-D 380 (483)
T ss_pred HHHHHHHHHh---------------h---ccChhhCCHHHHHHHHhcccCCH-----HHHHHHHHHHHHHHHHHHHHH-h
Confidence 1111111100 0 01123467778888877776553 778899999999999999999 7
Q ss_pred CCCEEEecCCCCCCCCcchhhhccccc---ccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHH
Q psy10133 248 GVHALVTPTTLTTAPLVSQYIQLDNRE---QCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNL 324 (342)
Q Consensus 248 ~~D~li~Pt~~~~ap~~~~~~~~~~~~---~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~ 324 (342)
++|+||+|+++.+||+++......... .......||.+||++|+|+++||+|.+.+|||+||||+|++++|+.||++
T Consensus 381 ~~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~GlPvGlQivg~~~~D~~LL~~ 460 (483)
T PRK06061 381 IVDVVLAPTTAQPPPRVGAFDRLGGWATDRAMIAACPYTWPWNVLGWPSINVPAGFTSDGLPIGAQLMGPANSEPLLISL 460 (483)
T ss_pred cCCEEEcCCCCCCCCCcccccccccchhhhhhhhcccccccccccCCCeEEEecCcCCCCCCeeeEEECCCCCHHHHHHH
Confidence 899999999999999987532111100 00112248999999999999999999889999999999999999999999
Q ss_pred HHHHHHhcCCCc
Q psy10133 325 AHWLESQVEFNI 336 (342)
Q Consensus 325 a~~le~~~~~~~ 336 (342)
|+.+|++++|+.
T Consensus 461 A~~le~~~~~~~ 472 (483)
T PRK06061 461 AAQLEAVSGWAE 472 (483)
T ss_pred HHHHHhhcCccc
Confidence 999999999864
No 18
>PRK05962 amidase; Validated
Probab=100.00 E-value=6.9e-58 Score=427.83 Aligned_cols=284 Identities=27% Similarity=0.379 Sum_probs=226.1
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|.++.|+
T Consensus 135 AaaVAaG~~~~alGtDtgGSiRiPAa~cGv~GlKPT~G~v~~~G~~~~~~s~d~~Gp~arsv~D~~~~~~vl~g~~~~~~ 214 (424)
T PRK05962 135 AVSVAEGTSEIAIGSDTGGSVRIPAALNGLVGFKPTARRIPLEGAFPLSPSLDSIGPLARTVADCAAADAVMAGEKPIPL 214 (424)
T ss_pred HHHHHcCCCceEEeeCCCCcchhhhHhhCceeeecCCCceeCCCcccCccccCccccccCCHHHHHHHHHHHcCCCCCcc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred CCccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhH-HH--HHHhHHH
Q psy10133 91 TTVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIV-TY--SILNQCE 167 (342)
Q Consensus 91 ~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~-~~--~~~~~~e 167 (342)
.. ...+++|||++.+++...++++++++++++++.|+++|++|+++++|....... .+ ..+...|
T Consensus 215 ~~------------~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~e 282 (424)
T PRK05962 215 EV------------LPVAGLRIGLPKGYLLADMEPDVAAAFEASLAALEKAGARIADLAIDDLIARLAEATRIGSIAGIE 282 (424)
T ss_pred cc------------cCcCCcEEEEEcccccccCCHHHHHHHHHHHHHHHHCCCEEEEeccchHHHHHHHHHHHhHHHHHH
Confidence 21 124579999998777667899999999999999999999999998764321111 11 1233334
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHS 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~ 247 (342)
....+..+ + ..+...+.+.++.++..|..++ ..+|.++++.|+.+++.|.++| .
T Consensus 283 ~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~a~~~r~~~~~~~~~~~-~ 336 (424)
T PRK05962 283 ASHIHADW-------------------L-ADLDANVDIRVKRPLSRRIKVP-----LEAYHRLMRTRAALARAMDERL-A 336 (424)
T ss_pred HHHHHHHH-------------------H-hhchhhCCHHHHHHHHhccCCC-----HHHHHHHHHHHHHHHHHHHHHh-c
Confidence 33332211 1 1223457788888888886555 3778899999999999999999 7
Q ss_pred CCCEEEecCCCCCCCCcchhhhccc-cccc-ccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHH
Q psy10133 248 GVHALVTPTTLTTAPLVSQYIQLDN-REQC-SVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLA 325 (342)
Q Consensus 248 ~~D~li~Pt~~~~ap~~~~~~~~~~-~~~~-~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a 325 (342)
++|+||+|+++.++|+++....... .... .....||.++|++|+|+++||++. +|+|+||||+|++++|+.||++|
T Consensus 337 ~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~G~Pa~svP~g~--~glPvGlqlvg~~~~D~~lL~~a 414 (424)
T PRK05962 337 GFDMFALPATPIVAPTIASVSEDEEEYDRVENLLLRNTQVANQFDLCSITLPMPG--MALPAGLMLTARNGSDRRLLAAA 414 (424)
T ss_pred CCCEEEeCCCCCCCCCccccccchHHHHHHHHHHHhhCcCccccCCCeEEEECCC--CCCCEEEEEECCCCCHHHHHHHH
Confidence 9999999999999998875311100 1000 012238999999999999999984 69999999999999999999999
Q ss_pred HHHHHhcCC
Q psy10133 326 HWLESQVEF 334 (342)
Q Consensus 326 ~~le~~~~~ 334 (342)
+++|+.+.+
T Consensus 415 ~~le~~l~~ 423 (424)
T PRK05962 415 ASVEKLLEH 423 (424)
T ss_pred HHHHHHhcc
Confidence 999998753
No 19
>PRK07488 indole acetimide hydrolase; Validated
Probab=100.00 E-value=2.6e-57 Score=429.78 Aligned_cols=299 Identities=28% Similarity=0.370 Sum_probs=230.9
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||+|+.|++|+++++|++|||||||+|+++++++|.|.++.++.
T Consensus 163 aaVAaG~~~~alGtDtgGSIRiPAa~cGvvG~KPT~G~vs~~G~~p~~~~~d~~Gp~arsv~D~a~~~~vl~g~d~~~~~ 242 (472)
T PRK07488 163 AAVAARLAPAGLGTDTGGSVRIPAALCGVVGLRPTVGRYSGDGVVPISHTRDTVGPIARSVADLALLDAVITGDAALPAP 242 (472)
T ss_pred HHHHcCCCceeeecCCCCCeecChHhhCceeeccCCCCCCCCCcccccccCCcccCccCCHHHHHHHHHHhcCCCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999997764321
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhH-HHHHHhHHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIV-TYSILNQCEVAS 170 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~-~~~~~~~~e~~~ 170 (342)
.+.+++|||++.+++...++++++++++++++.|+++|++|+++++|....... .+..+...|...
T Consensus 243 -------------~~~~~lrig~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~e~~~ 309 (472)
T PRK07488 243 -------------VALAGLRLGVPAAPFWDGLDPDVAAVAEAALAKLAAAGVTFVELDLPGLHELNEAVGFPIALYEALA 309 (472)
T ss_pred -------------cCcCCCEEEEEcchhccCCCHHHHHHHHHHHHHHHHCCCEEEeeCCcCHHHHhhhHHHHHHHHHHHH
Confidence 234679999998766667899999999999999999999999998876433222 233455667777
Q ss_pred HhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhc---ccchhhhhchHHHHHHHHHH-HHHHHHHHHHHHh
Q psy10133 171 NMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILA---GNYFLLKRNYENYFLKALKV-RSLIAQDFLRVWH 246 (342)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~a~~~-r~~~~~~~~~~~~ 246 (342)
++.+|... .+. ....++++.. ...+.++.++.. +..++ ..+|.++++. |+.+++.+.++|+
T Consensus 310 ~~~~~~~~-~~~-----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~~~a~~~~r~~~~~~~~~~~~ 374 (472)
T PRK07488 310 DLRAYLRE-NGA-----GVSFEELVAR----IASPDVRAIFRDLLDPPQIS-----EDAYRAALDVGRPRLQAWYRQAFA 374 (472)
T ss_pred HHHHHHHh-cCC-----CCCHHHHHhh----ccCHHHHHHHHHHhhcccCC-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77665321 111 1122333321 123444444322 22222 3668888777 8899999999992
Q ss_pred c-CCCEEEecCCCCCCCCcchhhhc----ccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHH
Q psy10133 247 S-GVHALVTPTTLTTAPLVSQYIQL----DNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLL 321 (342)
Q Consensus 247 ~-~~D~li~Pt~~~~ap~~~~~~~~----~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~L 321 (342)
+ ++|+||+|+++.++|++++.... ...........||.++|++|+|+++||+|++.+|||+||||+|++|+|..|
T Consensus 375 ~~~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~G~PaisvP~g~~~~glPvGlqlig~~~~d~~L 454 (472)
T PRK07488 375 RHGLDAILFPTTPLTAPPIGDDDTVILNGAAVPTFARVIRNTDPASNAGLPGLSLPAGLTPHGLPVGLELDGPAGSDRRL 454 (472)
T ss_pred hCCCCEEEeCCCCCCCccccccccccccccchhhhhhhhcccccccccCCCeEEEecCCCCCCCCeeEEEeCCCCCHHHH
Confidence 1 79999999999999998753110 000111112337899999999999999999888999999999999999999
Q ss_pred HHHHHHHHHhcCCCccc
Q psy10133 322 LNLAHWLESQVEFNIEK 338 (342)
Q Consensus 322 L~~a~~le~~~~~~~~~ 338 (342)
|++|+++|+.++++.+.
T Consensus 455 L~~A~~lE~~~~~~~~~ 471 (472)
T PRK07488 455 LAIGRALERVLGRLPAP 471 (472)
T ss_pred HHHHHHHHHhhCCCCCC
Confidence 99999999999886643
No 20
>TIGR02713 allophanate_hyd allophanate hydrolase. Allophanate hydrolase catalyzes the second reaction in an ATP-dependent two-step degradation of urea to ammonia and C02, following the action of the biotin-containing urea carboxylase. The yeast enzyme, a fusion of allophanate hydrolase to urea carboxylase, is designated urea amidolyase.
Probab=100.00 E-value=1.6e-57 Score=434.22 Aligned_cols=291 Identities=24% Similarity=0.341 Sum_probs=233.1
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|+++||+|||||||||+|||||||||||||+||||+.|++|.+.++|++|||||||+|++.++++|.|+|+.|+.
T Consensus 120 aAVAaG~v~~alGTDtgGSiRiPAa~cGlvGlKPT~G~vs~~Gv~p~~~slD~vG~~Arsv~D~~~~l~v~~g~d~~d~~ 199 (561)
T TIGR02713 120 VAVARGLVPFALGTDTAGSGRVPAALNNIVGLKPTKGLVSTTGVVPACRSLDCVSIFALTVADAEQVLRIAAAPDARDPY 199 (561)
T ss_pred HHHHcCCCceEEeecCCCcchhhhHHhCceeEecCCCCccCCCccccccCCCeeechhCCHHHHHHHHHhhcCCCCcCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CccCCCCCcCccCCCCCCcEEEEecc--CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcc-hhHHHHHHhHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEE--YKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQS-SIVTYSILNQCEV 168 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~--~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~-~~~~~~~~~~~e~ 168 (342)
+.+.|+... ....+++||||+.. ... ..+++++++++++++.|+++|++|++++++.... ....|...+..|.
T Consensus 200 s~~~p~~~~---~~~~~~lrigv~~~~~~~~-~~~~~v~~a~~~a~~~L~~~G~~v~~v~~~~~~~~~~~l~~~~~~~e~ 275 (561)
T TIGR02713 200 SRPLPAAAL---RRLPPPPRVGVPRAAQLEF-FGDSQAEAAFAAAVERLEALGVEVVEIDFAPFLETAALLYEGPWVAER 275 (561)
T ss_pred ccCCCchhh---cccCCCCEEEEECchhcCC-CCCHHHHHHHHHHHHHHHHCCCEEEEecchhHHHHHHHHHHHHHHHHH
Confidence 766553211 12246799999873 222 2578999999999999999999999999875422 2223333444444
Q ss_pred HHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy10133 169 ASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSG 248 (342)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~ 248 (342)
+..+..+ + ..+...+.+.++.++..|..++. .+|.++++.|+.+++.++++| ++
T Consensus 276 ~~~~~~~-------------------~-~~~~~~~~p~~~~~l~~g~~~sa-----~~~~~a~~~r~~l~~~~~~~~-~~ 329 (561)
T TIGR02713 276 YAAVGEF-------------------V-EAQPDALDPVVRGIITSATRFSA-----ADAFAAQYRLAALRRKAEALL-AG 329 (561)
T ss_pred HHHHHHH-------------------H-hhChhhcCHHHHHHHHhccCCCH-----HHHHHHHHHHHHHHHHHHHHH-hc
Confidence 4333222 1 12334577888888887776653 778889999999999999999 78
Q ss_pred CCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHH
Q psy10133 249 VHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWL 328 (342)
Q Consensus 249 ~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~l 328 (342)
+|+||+||++.+++. .+.. .+..........||.++|++|+|+++||+|+..+|||+||||+|++|+|+.||++|+.+
T Consensus 330 ~DvLl~Pt~p~~~~~-~~~~-~~~~~~~~~~~~yT~~~Nl~glPAisvP~g~~~~GlPvGvqlig~~~~D~~LL~~A~~l 407 (561)
T TIGR02713 330 VDVLLVPTAPTHPTI-EEVL-ADPVGLNSRLGTYTNFVNLLDLCAVAVPAGFRSDGLPFGVTLIGPAFHDAALASLGRRL 407 (561)
T ss_pred CCEEEeCCCCCCCCc-hhcc-CCchhhhhhhhcccccccccCCceEEeecccCCCCCCEEEEEEcCCCChHHHHHHHHHH
Confidence 999999999998653 3321 11111112233589999999999999999998899999999999999999999999999
Q ss_pred HHhcCC
Q psy10133 329 ESQVEF 334 (342)
Q Consensus 329 e~~~~~ 334 (342)
|++.+|
T Consensus 408 e~~~~~ 413 (561)
T TIGR02713 408 QAASAL 413 (561)
T ss_pred HhccCc
Confidence 998766
No 21
>PRK12470 amidase; Provisional
Probab=100.00 E-value=7.8e-57 Score=424.73 Aligned_cols=291 Identities=20% Similarity=0.270 Sum_probs=220.3
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.+.+..|+.
T Consensus 161 aAVAaG~~~~alGtDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~ld~~Gp~ar~v~D~a~~~~vl~~~~~~~~~ 240 (462)
T PRK12470 161 AAVAAGLAPVALGSDGGGSIRIPSTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVPGPEGE 240 (462)
T ss_pred HHHHcCCCceEEecCCCCchhhchhhhCceeecCCCCCcCCCCCCCcccCccccCCeeCCHHHHHHHHHHhcCCCCCCcc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999986543321
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCC---CCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYK---SEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEV 168 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~---~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~ 168 (342)
+... .....+++|||++.+++ ...++++++++++++++.|+++|++|++++++........|....
T Consensus 241 -----~~~~--~~~~~~~lrig~~~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~---- 309 (462)
T PRK12470 241 -----FVAA--AAREPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGHDVVVRDPDYPAATYANYLPRF---- 309 (462)
T ss_pred -----hhhh--hccCCCCCEEEEECCccccCCCCCCHHHHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHHHHHH----
Confidence 1000 01334679999997653 246899999999999999999999999886432211111111000
Q ss_pred HHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy10133 169 ASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSG 248 (342)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~ 248 (342)
...+.... . ...+...+.+.++.++..|..++. .+|......+..+++.|.++| ++
T Consensus 310 ~~~~~~~~-----~-------------~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~ 365 (462)
T PRK12470 310 FRGISDDA-----D-------------AQAHPDRLEARTRAIARLGSFFSD-----RRMAALRAAEVVLSARIQSIF-DD 365 (462)
T ss_pred HHHHHHhh-----c-------------cccChhhcCHHHHHHHHhcccCCH-----HHHHHHHHHHHHHHHHHHHHH-hC
Confidence 00111000 0 011234577778888888876653 455544444558889999999 79
Q ss_pred CCEEEecCCCCCCCCcchhhhcc---cccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHH
Q psy10133 249 VHALVTPTTLTTAPLVSQYIQLD---NREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLA 325 (342)
Q Consensus 249 ~D~li~Pt~~~~ap~~~~~~~~~---~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a 325 (342)
+|+||+||+|.+||+++...... ..........||.++|++|+|+++||+|++.+|||+|+||+|++++|..||++|
T Consensus 366 ~D~ll~Pt~p~~ap~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlqlvg~~~~D~~LL~~A 445 (462)
T PRK12470 366 VDVVVTPGTATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVPWDFDGDGLPMSVQLVGRPYDEATLLALA 445 (462)
T ss_pred CCEEeCCCCCCCCCCCCccCCCcchhhhhhhhhccCcCccchhcCCCeEEEecCcCCCCCceEEEEECCCCcHHHHHHHH
Confidence 99999999999999887532111 000111233479999999999999999998899999999999999999999999
Q ss_pred HHHHHhcCCCcc
Q psy10133 326 HWLESQVEFNIE 337 (342)
Q Consensus 326 ~~le~~~~~~~~ 337 (342)
+++|+..+|+..
T Consensus 446 ~~le~~~~~~~~ 457 (462)
T PRK12470 446 AQIESARPWAHR 457 (462)
T ss_pred HHHHccCCcccc
Confidence 999999988643
No 22
>PF01425 Amidase: Amidase; InterPro: IPR000120 Amidase signature (AS) enzymes are a large group of hydrolytic enzymes that contain a conserved stretch of approximately 130 amino acids known as the AS sequence. They are widespread, being found in both prokaryotes and eukaryotes. AS enzymes catalyse the hydrolysis of amide bonds (CO-NH2), although the family has diverged widely with regard to substrate specificity and function. Nonetheless, these enzymes maintain a core alpha/beta/alpha structure, where the topologies of the N- and C-terminal halves are similar. AS enzymes characteristically have a highly conserved C-terminal region rich in serine and glycine residues, but devoid of aspartic acid and histidine residues, therefore they differ from classical serine hydrolases. These enzymes posses a unique, highly conserved Ser-Ser-Lys catalytic triad used for amide hydrolysis, although the catalytic mechanism for acyl-enzyme intermediate formation can differ between enzymes []. Examples of AS enzymes include: Peptide amidase (Pam) [], which catalyses the hydrolysis of the C-terminal amide bond of peptides. Fatty acid amide hydrolases [], which hydrolyse fatty acid amid substrates (e.g. cannabinoid anandamide and sleep-inducing oleamide), thereby controlling the level and duration of signalling induced by this diverse class of lipid transmitters. Malonamidase E2 [], which catalyses the hydrolysis of malonamate into malonate and ammonia, and which is involved in the transport of fixed nitrogen from bacteroids to plant cells in symbiotic nitrogen metabolism. Subunit A of Glu-tRNA(Gln) amidotransferase [],a heterotrimeric enzyme that catalyses the formation of Gln-tRNA(Gln) by the transamidation of misacylated Glu-tRNA(Gln) via amidolysis of glutamine. ; GO: 0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor; PDB: 1OCL_B 1OBK_A 1OBL_B 1OBJ_A 1OCM_B 1OCH_A 1OCK_B 1OBI_A 1O9Q_A 1O9N_B ....
Probab=100.00 E-value=1e-57 Score=432.70 Aligned_cols=297 Identities=36% Similarity=0.526 Sum_probs=231.0
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|+++||||||||||||+||+||||||||||+|+||+.|++|++.++|++|||||||+|+++++++|+++++.|+.
T Consensus 137 aavaag~~~~a~GtDtgGSiR~PAa~~Gv~GlkPT~G~vs~~G~~~~~~~~d~~GpmaRsv~Dl~~~l~vl~g~~~~d~~ 216 (441)
T PF01425_consen 137 AAVAAGFVPLAIGTDTGGSIRIPAAFCGVVGLKPTRGRVSRDGVFPLSPSFDTVGPMARSVEDLALLLDVLAGPDPWDPD 216 (441)
T ss_dssp HHHHTTSSSEEEEEESSSTTHHHHHHHTSEEEE-STTSS--TTB-CSSTTT-EEEEEESSHHHHHHHHHHHBSCBTTBTT
T ss_pred cccceecccccccccccccccCchhccccceeccccccccccccccccccccccccccCcHHHHHHHHHHhcCCCccCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CccCC--CCCcCcc-CCCCCCcEEEEeccCC-CCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHH
Q psy10133 92 TVQKN--ISPVTLD-QLDLSRLVIGVPEEYK-SEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCE 167 (342)
Q Consensus 92 ~~~~p--~~~~~~~-~~~~~~lrIg~~~~~~-~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e 167 (342)
+...| ...+... ....+++||||+.+++ +..++++++++++++++.|+++|++|+++++|+.......+..+...|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~lrIGv~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~vv~~~~p~~~~~~~~~~~~~~~e 296 (441)
T PF01425_consen 217 SLPVPPPPPDFDAPLPKSLKGLRIGVPRDDGQWVPVDPEVRRAFEEAAEALEAAGAEVVEVDLPDLDEAMDAYYRIFVSE 296 (441)
T ss_dssp SCSTT--SS-CSTTTTSTTTT-EEEEEGGGG-SSTSSHHHHHHHHHHHHHHHHTT-EEEEE--TTGGHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCccccccccccccccccHHHHHHHHHHHHhhcccccccccccCchHHHHHHHHhhhHHHH
Confidence 66543 1112222 5678899999999988 778999999999999999999999999999998876666666666667
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHS 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~ 247 (342)
...++.++ ......+...+...+.+.+..++..+..........+.|.++++.|..+++.+.++| +
T Consensus 297 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~-~ 362 (441)
T PF01425_consen 297 GAANLARY-------------KDFARLLAKWRDPPLSPIVRSRLEQGAAISSAEDDSEYYLQAQRRRARLRRRFDELF-E 362 (441)
T ss_dssp HHHHHTTT-------------CSHHHHHHHHHHHHSHHHHHHHHHHHHHHHCTTTTTTHHHHHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHhhh-------------hHHHHhhhcccccccccchhhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 76665432 122334434445567777777777665544322222448889999999999999999 6
Q ss_pred CCCEEEecCCCCCCCCcchhhhc-cc---ccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHH
Q psy10133 248 GVHALVTPTTLTTAPLVSQYIQL-DN---REQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLL 322 (342)
Q Consensus 248 ~~D~li~Pt~~~~ap~~~~~~~~-~~---~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL 322 (342)
++|+||+|+++.+||+++..... .. .........+|.++|++|+|+++||+|...+|||+||||+|++|+|+.||
T Consensus 363 ~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~t~~~n~~g~PaisvP~g~~~~GlPvGvqlvg~~~~D~~LL 441 (441)
T PF01425_consen 363 EYDALLTPTTPVPAPPIGEPSPLGPDYTALWNLLDFTAYTSPANLAGLPAISVPVGFDPDGLPVGVQLVGRPGSDEKLL 441 (441)
T ss_dssp HSSEEEEESSSSS-BBTTTTCCCTSCHHHHHHHHTTTTTTHHHHHHTHHEEEEEEEEETTTEEEEEEEEESTTBHHHHH
T ss_pred hcceecccCCCcCCCccccccccccchhhhhhhhhhhccccccccccCcceeeecCCCCCCcCEeEEEECCCCCccCcC
Confidence 79999999999999999865321 00 11111233467999999999999999998899999999999999999997
No 23
>PRK06529 amidase; Provisional
Probab=100.00 E-value=3.5e-56 Score=423.16 Aligned_cols=298 Identities=23% Similarity=0.247 Sum_probs=225.0
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCcc-ccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVP-GILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~-Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
||||+|++++|+|||||||||+|||||||||||||+||||..+..+.+.+.|++ |||||||+|+++++++|.|.+..|+
T Consensus 153 aaVAaG~~~~aiGtDtgGSIRiPAa~cGvvGlKPT~Grvp~~~~~~~~~~~~~~~Gpiarsv~D~a~~l~~~~g~~~~~~ 232 (482)
T PRK06529 153 ALVSSGIVALAAASDGGGSIRIPASFNGLIGLKPSRGRIPVGPGSYRGWQGASVHFALTKSVRDTRRLLYYLQMYQMESP 232 (482)
T ss_pred HHHHcCCCceeeecCCCCCeecChHhhCceeEccCCCccCCCCCCccccccccccCCccCcHHHHHHHHHHhhCCCCCCC
Confidence 799999999999999999999999999999999999999987766655666665 7999999999999999999988777
Q ss_pred CCccCCCCCcCccCCCCCCcEEEEeccCC-CCCCCHHHHHHHHHHHHHHHHCCCEEEEec-CCC-CcchhHHHHHHhHHH
Q psy10133 91 TTVQKNISPVTLDQLDLSRLVIGVPEEYK-SEHISPEVMDTWESVLKLMAKAGAQVKKVS-LPH-TQSSIVTYSILNQCE 167 (342)
Q Consensus 91 ~~~~~p~~~~~~~~~~~~~lrIg~~~~~~-~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~-~p~-~~~~~~~~~~~~~~e 167 (342)
.+...+... .......+++|||++.+++ ...++++++++++++++.|+++|++|++++ +|. .......+..++..|
T Consensus 233 ~~~~~~~~~-~~~~~~~~~lrIg~~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~ev~~~p~~~~~~~~~~~~~~~~e 311 (482)
T PRK06529 233 FPLATLSKE-SLFQSLQRPLKIAFYQRSPDGSPVSLDAAKALKQAVTFLREQGHEVVELEEFPLDMTEVMRSYYIMNSVE 311 (482)
T ss_pred cccCCcccc-hhccccCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEcCCCCCCHHHHHHHHHHHHHHH
Confidence 654321110 0001224789999998754 356899999999999999999999999996 453 233445566666666
Q ss_pred HHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhc
Q psy10133 168 VASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHS 247 (342)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~ 247 (342)
....+..+.. .++... ....+.+..+.++..|..++ ..+|.++.+.|+.+++.|.++| .
T Consensus 312 ~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~g~~~~-----~~~~~~a~~~r~~~~~~~~~~f-~ 370 (482)
T PRK06529 312 TAAMFDDIED-ALGRPM--------------TKDDMETMTWAIYQSGQDIP-----AKRYSQVLQKWDTYSATMASFH-E 370 (482)
T ss_pred HHHHHHHHHH-hcCCCC--------------ChhhcCHHHHHHHHHhhcCC-----HHHHHHHHHHHHHHHHHHHHHH-c
Confidence 6554432210 011000 00123444444555555444 3778899999999999999999 7
Q ss_pred CCCEEEecCCCCCCCCcchhhhcc-----------------------cccccccccccccCCCCCCCCeEEecCCCCCCC
Q psy10133 248 GVHALVTPTTLTTAPLVSQYIQLD-----------------------NREQCSVQDYCTQPANLAGCPAISVPINLSHEK 304 (342)
Q Consensus 248 ~~D~li~Pt~~~~ap~~~~~~~~~-----------------------~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~g 304 (342)
++|+||+|+++.+||+++...... ..........||.++|++|+|+++||+|.+.+|
T Consensus 371 ~~D~ll~Pt~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~Nl~G~PaisvP~g~~~~G 450 (482)
T PRK06529 371 TYDLLLTFTTNTPAPKHGQLDPDSKLMANLAQAEIFSSEEQQNLVETMFEKSLAITPYTALANLTGQPAISLPTYETKEG 450 (482)
T ss_pred CCCEEEcCCCCCCCCCCCccCcccchhhhccccccccchhhhhhhhhhhhhhhhcccccccccccCCCeEEeecCcCCCC
Confidence 999999999999999886521100 000001123489999999999999999998899
Q ss_pred CceeEEEecCCCChHHHHHHHHHHHHh
Q psy10133 305 LPVSIQLMAPNFQDGLLLNLAHWLESQ 331 (342)
Q Consensus 305 lPvGiqlvg~~~~D~~LL~~a~~le~~ 331 (342)
||+|+||+|++|+|+.||++|+++|++
T Consensus 451 lPvGlQlvg~~~~D~~lL~~a~~le~~ 477 (482)
T PRK06529 451 LPMGVQLIAAKGREDLLLGIAEQFEAA 477 (482)
T ss_pred CceeEEEecCCCcHHHHHHHHHHHHhc
Confidence 999999999999999999999999986
No 24
>PRK08310 amidase; Provisional
Probab=100.00 E-value=2.9e-56 Score=413.24 Aligned_cols=276 Identities=26% Similarity=0.361 Sum_probs=220.7
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|+.|++.++|++|||||||+|+++++++|.+.++.|+.
T Consensus 117 aaVAag~~~~aiGtDtGGSIRiPAa~cGv~G~KPT~Grvs~~G~~~~~~~~d~~Gp~arsv~D~~~~~~~l~g~~~~~~~ 196 (395)
T PRK08310 117 AAVAGGLADFALGTDTGGSVRAPASFCGLYGLRPTHGRISLEGVMPLAPSFDTVGWFARDIALLERVGEVLLGDDAQEFP 196 (395)
T ss_pred HHHHcCCcceEEecCCCCCeecchHhcCeeEeecCCCcccCCCCcccccCCCeeeeeeCCHHHHHHHHHHHcCCCcccCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999997765421
Q ss_pred CccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCC--cchhHHHHHHhHHHHH
Q psy10133 92 TVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHT--QSSIVTYSILNQCEVA 169 (342)
Q Consensus 92 ~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~--~~~~~~~~~~~~~e~~ 169 (342)
..+||++..++. ..++++++++++++++.|++++.++++++.+.. ......+..+...|.+
T Consensus 197 ----------------~~~ri~~~~~~~-~~~~~~v~~a~~~a~~~L~~~~g~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (395)
T PRK08310 197 ----------------LTQRLLIPVDLF-ALLDPAVRAALEAALARLRPHLGPAKPASVPPLSLDEWYEAFRVLQAAEAW 259 (395)
T ss_pred ----------------cCceEEEecccc-ccCCHHHHHHHHHHHHHHHHhCCceeeecCCcccHHHHHHHHHHHHHHHHH
Confidence 136899987654 458999999999999999986448888875432 2223344444444544
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
..+..+ + ..+...+.+.++.++..|..++. .+|.++.+.|+.+++.+.++| +++
T Consensus 260 ~~~~~~-------------------~-~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~a~~~r~~~~~~~~~~~-~~~ 313 (395)
T PRK08310 260 ETHGAW-------------------I-SSGNPQLGPGVADRFAAGAEVTA-----DQVEAARARRAAFARELAALL-GPD 313 (395)
T ss_pred HHHHHH-------------------H-HhchhhcCHHHHHHHHhhccCCH-----HHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 433321 1 11224467777778877766553 778899999999999999999 789
Q ss_pred CEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLAHWLE 329 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a~~le 329 (342)
|+||+|+++.+||+++.... ...........||.++|++|+|+++||+|. .+|||+||||+|++++|+.||++|+++|
T Consensus 314 Dvll~Pt~~~~a~~~~~~~~-~~~~~~~~~~~~t~~~N~~G~PaisvP~g~-~~glPvglQivg~~~~D~~lL~~a~~le 391 (395)
T PRK08310 314 AVLLLPTVPGAAPLRGAPFE-ALEAYRERALRLLCIAGLAGLPQISLPLAS-VDGAPFGLSLIGPRGSDRSLLALAQTIA 391 (395)
T ss_pred CEEEeCCCCCCCccCCCccc-hHHHHHHHHHhhceeehhcCCCeEEEECCC-CCCCCEEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999999999875311 000000112347999999999999999996 6899999999999999999999999999
Q ss_pred Hhc
Q psy10133 330 SQV 332 (342)
Q Consensus 330 ~~~ 332 (342)
++.
T Consensus 392 ~~~ 394 (395)
T PRK08310 392 AAR 394 (395)
T ss_pred hhh
Confidence 864
No 25
>PRK07869 amidase; Provisional
Probab=100.00 E-value=1.7e-55 Score=417.32 Aligned_cols=298 Identities=24% Similarity=0.274 Sum_probs=211.4
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccC-CCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPL-VNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~-~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
||||+|++++|+|||||||||+|||||||||||||+||||+.|+.|. +.++|++|||||||+|++++++++.|.++.+.
T Consensus 163 aAVAaG~~~~alGTDtgGSiRiPAa~cGvvG~KPT~G~vs~~g~~~~~~~~~d~~Gp~arsv~D~a~l~~v~~g~~~~~~ 242 (468)
T PRK07869 163 ALVAAGVVPIAHANDGGGSIRIPAACCGLVGLKPSRGRLPLDPELRRLPVNIVANGVLTRTVRDTAAFYREAERYYRNPK 242 (468)
T ss_pred HHHHcCCCceeeecCCCCccccchhhcCeeeecCCCCcccCCCCcccCccccceecCeeCcHHHHHHHHHHHhccCccCC
Confidence 68999999999999999999999999999999999999999998764 45789999999999999999999999875432
Q ss_pred CCccCCCCCcCccCCCCCCcEEEEeccCCC-CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHHH
Q psy10133 91 TTVQKNISPVTLDQLDLSRLVIGVPEEYKS-EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEVA 169 (342)
Q Consensus 91 ~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~-~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~~ 169 (342)
.. +.++ . ...+.+++||||+.+++. ..++++++++++++++.|+++|++|+++++|........+.........
T Consensus 243 ~~-~~~~--~--~~~~~~~lrigv~~~~~~~~~~~p~v~~a~~~a~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~ 317 (468)
T PRK07869 243 LP-PIGD--V--TGPGKQRLRIAVVTDSVTGREADPEVREAVLATARLLEELGHRVEPVDLPVPASFVDDFLLYWGFLAF 317 (468)
T ss_pred CC-chhh--h--cccCCCCCEEEEECCccCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchHHHHHHHHHHHHHHHH
Confidence 11 1111 0 012357899999987664 5689999999999999999999999999877532221111111110000
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFLRVWHSGV 249 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~~~~~~~~ 249 (342)
. ...+...... ..+.+...+.+..+....... ...++.++.+.|+.+++.+.++| +++
T Consensus 318 ~-~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~-~~~ 375 (468)
T PRK07869 318 A-LVRGGRRTFG-------------------PSFDRTRLDNLTLGLARHARR-NLHRLPLAIARLRRLRRVYARFF-GTY 375 (468)
T ss_pred H-HHhhhhhhcc-------------------cccCHHHhhHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHH-hcC
Confidence 0 0000000000 001111111111110000000 11346677778888889999999 789
Q ss_pred CEEEecCCCCCCCCcchhhhcccc----cccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHHHH
Q psy10133 250 HALVTPTTLTTAPLVSQYIQLDNR----EQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLNLA 325 (342)
Q Consensus 250 D~li~Pt~~~~ap~~~~~~~~~~~----~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~~a 325 (342)
|+||+||++.+||+++........ ........||.++|++|+|+++||+|++.+|||+||||+|++++|+.||++|
T Consensus 376 Dvll~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~~~GlPvGlQivg~~~~D~~lL~~A 455 (468)
T PRK07869 376 DVVLTPTLAHTTPEIGYLDPTQDFDTVLDRLISYVAFTPLQNATGEPAISLPLGQSSDGLPVGMMFSADVGDEATLLELA 455 (468)
T ss_pred CEEecCCCCCCCCCCCccCccccchhhhHHHhcccccCccccccCCCceeeecCcCCCCCCeeEEEecCCCchHHHHHHH
Confidence 999999999999998752111000 0011223479999999999999999998899999999999999999999999
Q ss_pred HHHHHhcCCCc
Q psy10133 326 HWLESQVEFNI 336 (342)
Q Consensus 326 ~~le~~~~~~~ 336 (342)
+.+|+..+|+.
T Consensus 456 ~~le~~~~~~~ 466 (468)
T PRK07869 456 YELEEAQPWPR 466 (468)
T ss_pred HHHHhcCCCcc
Confidence 99999988864
No 26
>PLN02722 indole-3-acetamide amidohydrolase
Probab=100.00 E-value=2.2e-55 Score=408.77 Aligned_cols=277 Identities=25% Similarity=0.340 Sum_probs=219.1
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.||||+|++++|+|||||||||+||+||||||||||+||||+.|++|+++++|++|||||||+|+++++++|.|.+..|+
T Consensus 117 AaAVAaG~~p~AlGtDtgGSIRiPAa~cGvvG~KPT~G~vp~~G~~pla~sld~~G~~ar~v~D~a~~~~~l~g~~~~d~ 196 (422)
T PLN02722 117 AVAVGAKLVDFSLGTDTGGSVRVPASYCGIFGFRPSHGAVSTVGVIPMAQSFDTVGWFARDPVILKRVGHVLLQQPDVNP 196 (422)
T ss_pred HHHHHcCCCceEeecCCCcccccChhHcceEEEecCCCccCCCCCCcccCCCCcccceeCCHHHHHHHHHHHcCCCCCCC
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999876553
Q ss_pred CCccCCCCCcCccCCCCCCcEEEEeccCCC--CCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcc-hhHH--------
Q psy10133 91 TTVQKNISPVTLDQLDLSRLVIGVPEEYKS--EHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQS-SIVT-------- 159 (342)
Q Consensus 91 ~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~--~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~-~~~~-------- 159 (342)
. ..+||+++.+++. ...++++.++++++++.|+++|+++++++++.... ....
T Consensus 197 ~----------------~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~g 260 (422)
T PLN02722 197 I----------------KPSQIIIAEDCFQLSSIPHDRLVQVLVKSVEKLFGGGDIVKHVNLGDYVEDKVPSLKHFMSKE 260 (422)
T ss_pred c----------------CCceEEechhhhhhcccccHHHHHHHHHHHHHHhcCCCeeeecchhHHHHHhHHHHHHHhhcc
Confidence 2 2469999876553 23568899999999999999999998887653211 1111
Q ss_pred -----------------HHHHhHHHHHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhc
Q psy10133 160 -----------------YSILNQCEVASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRN 222 (342)
Q Consensus 160 -----------------~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 222 (342)
+..+..+|....+. .++ ..+.+.+.+.++.++..|..++.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-------------------~~~-~~~~~~~~~~v~~~~~~g~~~s~--- 317 (422)
T PLN02722 261 IKEQEYNIPSLAALSSAMRLLQRYEFKINHG-------------------EWI-TAVKPEFGPGISERIWEAVRTTE--- 317 (422)
T ss_pred cccceecchhHHHHHHHHHHHHHHHHHHHHH-------------------HHH-HhhhhhCCHHHHHHHHHhccCCH---
Confidence 11111112111111 111 22345689999999999987764
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCC
Q psy10133 223 YENYFLKALKVRSLIAQDFLRVWHSGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSH 302 (342)
Q Consensus 223 ~~~~~~~a~~~r~~~~~~~~~~~~~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~ 302 (342)
.+|.++++.|+++++.+.++| +++|+||+||+|.+||+++... ............+|.++|++|+|+++||++..
T Consensus 318 --~~y~~a~~~r~~~~~~~~~~~-~~~D~Ll~Pt~p~~ap~~~~~~-~~~~~~~~~~~~~t~~~nl~G~PaisvP~g~~- 392 (422)
T PLN02722 318 --EKIDACQSVKTELRAALTTLL-GEFGVLVIPTVPGPPPKLQADP-TTLESFRARAFSLLSIAGVSGFCQVSIPLGLH- 392 (422)
T ss_pred --HHHHHHHHHHHHHHHHHHHHh-cCCCEEEeCCCCCCCCCcccCc-chHHHHHHHHHHhhhcccccCCCEEEEeCCCC-
Confidence 789999999999999999999 8999999999999999886321 00000000122478999999999999999985
Q ss_pred CCCceeEEEecCCCChHHHHHHHHHHHHh
Q psy10133 303 EKLPVSIQLMAPNFQDGLLLNLAHWLESQ 331 (342)
Q Consensus 303 ~glPvGiqlvg~~~~D~~LL~~a~~le~~ 331 (342)
+|||+||||+|++++|..||++|+.+.+.
T Consensus 393 ~glPvGlqivg~~~~D~~lL~~a~~l~~~ 421 (422)
T PLN02722 393 DNLPVSVSLLAKHGSDGFLLNLVESLYGT 421 (422)
T ss_pred CCCCEEEEEECCCCChHHHHHHHHHHHhh
Confidence 79999999999999999999999988753
No 27
>PRK06828 amidase; Provisional
Probab=100.00 E-value=3.1e-54 Score=407.49 Aligned_cols=296 Identities=23% Similarity=0.293 Sum_probs=223.9
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|++++|+|||||||||+||+||||||||||+|+||+.|++|+++++|++|||||||+|+++++++|.|+++.|+.
T Consensus 178 aaVAag~~~~aiGtDtgGSiRiPAa~cGvvGlKPT~G~vs~~G~~p~~~s~d~~Gp~arsv~D~a~~~~~l~g~d~~d~~ 257 (491)
T PRK06828 178 IAVAANFTVVSVGTETDGSILSPAVQNSVVGIKPTVGLISRRGIIPFTYSQDTAGPFARTVTDAAILLGSLTGVDEKDVV 257 (491)
T ss_pred HHHHcCCCceEeecCCCCccccchhhcCceeecCCCCCccCCCCCCCccCCCeeccccCCHHHHHHHHHHHhCCCccCcc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred CccCCC---CCcCcc--CCCCCCcEEEEeccCC--CCCCCHHHHHHHHHHHHHHHHCCCEEEE-ecCCCCcchhHHHHHH
Q psy10133 92 TVQKNI---SPVTLD--QLDLSRLVIGVPEEYK--SEHISPEVMDTWESVLKLMAKAGAQVKK-VSLPHTQSSIVTYSIL 163 (342)
Q Consensus 92 ~~~~p~---~~~~~~--~~~~~~lrIg~~~~~~--~~~~~~~v~~a~~~~~~~L~~~G~~v~~-~~~p~~~~~~~~~~~~ 163 (342)
+...+. .++... ..+.+++||||+.+.. +...+++++++++++++.|+++|++|++ +++|..... ....+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~lrigv~~~~~~~~~~~~~~v~~a~~~a~~~L~~~G~~v~~~~~~p~~~~~--~~~~~ 335 (491)
T PRK06828 258 THKSEGIAEHDYTKYLDANGLNGAKIGVYNNAPKEYYESGEYDEKLFKETIEVLRSEGATVVEDIDIPSFHRE--WSWGV 335 (491)
T ss_pred ccccCcCCCCchhhhhccccCCCCEEEEEcCccccccCCCHHHHHHHHHHHHHHHhcCCEEEecccCccchhH--HHHHH
Confidence 654221 111000 1246889999965311 2247999999999999999999999998 777753322 12234
Q ss_pred hHHHHHHHhhhhcccccCCcCCCCCCChHHHHHh-----hhhhcccHHHHH-HHhcccchhhhhchHHHHHHHHHHHHHH
Q psy10133 164 NQCEVASNMARYTGLFYGHRVTPSVNSTDQLLAE-----TRKDAFGLVVKS-RILAGNYFLLKRNYENYFLKALKVRSLI 237 (342)
Q Consensus 164 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~a~~~r~~~ 237 (342)
...|+..++..|........ ...+..+++.. .+...+.+.... ++..|..++ ..+|.++++.|..+
T Consensus 336 ~~~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~y~~a~~~r~~~ 407 (491)
T PRK06828 336 LLYELKHSLDNYLSKLPSTI---PVHSISELMEFNENIAERALKYGQTKLERRKDFPNTLR-----NPEYLNARLEDIYF 407 (491)
T ss_pred HHHHHHHHHHHHHHhcCCCC---CCCCHHHHHHHhhhchhhhhccCHHHHHHHHhcCCCCC-----hHHHHHHHHHHHHh
Confidence 45677666666532111000 12334444432 222346664443 355665444 36688888887764
Q ss_pred --HHHHHHHHhc-CCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecC
Q psy10133 238 --AQDFLRVWHS-GVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAP 314 (342)
Q Consensus 238 --~~~~~~~~~~-~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~ 314 (342)
++.+.++|.+ ++|+||+|+++.. .++|++|+|+++||+|++.+|||+||||+|+
T Consensus 408 ~~~~~~~~~~~~~~~D~ll~Pt~~~~-----------------------~~~~~~GlPaisvP~G~~~~GlPvGlQlig~ 464 (491)
T PRK06828 408 SQEQGIDFALEKYNLDAILFPSYIGS-----------------------TICAKAGYPSIAIPAGYMEGGRPFGITLAST 464 (491)
T ss_pred hhHHHHHHHHHhcCCCEEEeCCCCcc-----------------------cchhhcCCCeEEeecCCCCCCcCeEEEEECC
Confidence 3688999932 5999999998742 2457999999999999988899999999999
Q ss_pred CCChHHHHHHHHHHHHhcCCCccccc
Q psy10133 315 NFQDGLLLNLAHWLESQVEFNIEKLL 340 (342)
Q Consensus 315 ~~~D~~LL~~a~~le~~~~~~~~~~~ 340 (342)
+|+|..||++|.++|++++|+.+..|
T Consensus 465 ~~~D~~LL~~A~a~E~~~~~r~~P~~ 490 (491)
T PRK06828 465 AFSEGTLIKLAYAFEQATKHRKIPGL 490 (491)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999887665543
No 28
>PRK06707 amidase; Provisional
Probab=100.00 E-value=4.9e-53 Score=401.35 Aligned_cols=289 Identities=25% Similarity=0.305 Sum_probs=224.5
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|++++|||||||||||+||++|||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|.|+.|+.
T Consensus 233 aAVAag~~~~aiGtDtgGSIr~PAs~~GvvGlKPT~G~vs~~Gv~p~s~slDt~Gp~artV~D~a~~l~~~~g~d~~d~~ 312 (536)
T PRK06707 233 TVVAADFAPLAVGTETTGSIVAPAAQQSVVGLRPSLGMVSRTGIIPLAETLDTAGPMARTVKDAATLFNAMIGYDEKDVM 312 (536)
T ss_pred HHHhCCCCceEEecCCCCcccccHHHcCeEEEeCCCCcccCCCCcCcccccCeecCeeCCHHHHHHHHHHHcCCCCCccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CccCCC---CCcCcc--CCCCCCcEEEEeccCCCCCCCHHHHHH-HHHHHHHHHHCCCEEEE-ecCCCCcchhHHHHHHh
Q psy10133 92 TVQKNI---SPVTLD--QLDLSRLVIGVPEEYKSEHISPEVMDT-WESVLKLMAKAGAQVKK-VSLPHTQSSIVTYSILN 164 (342)
Q Consensus 92 ~~~~p~---~~~~~~--~~~~~~lrIg~~~~~~~~~~~~~v~~a-~~~~~~~L~~~G~~v~~-~~~p~~~~~~~~~~~~~ 164 (342)
+...|. .++... ...++++|||++.++. .++++.++ ++++++.|+++|++|++ +++|... . .+..+.
T Consensus 313 ~~~~~~~~~~~~~~~l~~~~l~~~rigv~~~~~---~~~~~~~a~~~~a~~~L~~~Ga~iv~~~~l~~~~--~-~~~~~~ 386 (536)
T PRK06707 313 TEKVKDKERIDYTKDLSIDGLKGKKIGLLFSVD---QQDENRKAVAEKIRKDLQDAGAILTDYIQLNNGG--V-DNLQTL 386 (536)
T ss_pred cccccccCCcchhhhccccCCCCCEEEEECCcC---CCHHHHHHHHHHHHHHHHHcCCEEEeccCCchhh--H-HHHHHH
Confidence 653331 121111 2347889999997763 57888888 58899999999999999 8876422 1 233455
Q ss_pred HHHHHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhh-----chHHHHHHHHHHHHHHHH
Q psy10133 165 QCEVASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKR-----NYENYFLKALKVRSLIAQ 239 (342)
Q Consensus 165 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~a~~~r~~~~~ 239 (342)
..|+..++..|.+..++.. ..+..+++... .+.++.++..|+...... ..+.++..+.+.|+.+++
T Consensus 387 ~~e~~~~l~~y~~~~~~~~----~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 457 (536)
T PRK06707 387 EYEFKHNVNDYFSQQKNVP----VKSLEEIIAFN-----KKDSKRRIKYGQTLIEASEKSAITKDEFEKVVQTSQENAKK 457 (536)
T ss_pred HHHHHHHHHHHHhhhcCCC----CCCHHHHHHhc-----CHHHHHHHHccchhhhhhhhcccccHHHHHHHHHHHHHHHH
Confidence 6888888888765433221 12344444211 245666776676433211 122344456677778888
Q ss_pred HHHHHHh-cCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCCh
Q psy10133 240 DFLRVWH-SGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQD 318 (342)
Q Consensus 240 ~~~~~~~-~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D 318 (342)
.++++|. +++|+||+|.. ..|.++|++|+|+++||+|++.+|+|+|+||+|++|+|
T Consensus 458 ~~~~~~~~~~~Dall~p~~-----------------------~~t~~an~aG~PaitvP~G~~~~GlP~Glqlig~~~~e 514 (536)
T PRK06707 458 ELDRYLVEKGLDALVMINN-----------------------EEVLLSAVAGYPELAVPAGYDNNGEPVGAVFVGKQFGE 514 (536)
T ss_pred HHHHHHhhCCCCEEEecCC-----------------------CcchhhHhcCCCeEEEecccCCCCCCeEEEEECCCCCh
Confidence 8999992 38999999831 03668899999999999999889999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCccc
Q psy10133 319 GLLLNLAHWLESQVEFNIEK 338 (342)
Q Consensus 319 ~~LL~~a~~le~~~~~~~~~ 338 (342)
..||++|+++|++++.+.+.
T Consensus 515 ~~LL~~A~~~E~~~~~r~~p 534 (536)
T PRK06707 515 KELFNIGYAYEQQSKNRKPP 534 (536)
T ss_pred HHHHHHHHHHHHhCcCCCCC
Confidence 99999999999999876543
No 29
>PRK11910 amidase; Provisional
Probab=100.00 E-value=7.5e-52 Score=392.52 Aligned_cols=282 Identities=21% Similarity=0.300 Sum_probs=213.9
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.+|||+|++++|||||||||||+||+||||||||||+|++|+.|++|+++++|++|||||||+|++.++++|.|.+..++
T Consensus 323 AAAVAaG~a~~AiGTDTgGSIR~PAa~cGvVGlKPT~G~vSr~GviPls~slDtvGPmaRsV~D~a~ll~vi~g~~~~~~ 402 (615)
T PRK11910 323 ATAATSDFAAIAIGTETNGSIITPASAQSAVGYKPSQGLVNNKGIIPLSSRFDTPGPLTRTVNDAYLTTNALTNTTSNPP 402 (615)
T ss_pred HHHHhcCCceEEeecCCCCccccchHHcCceeEecCCCCCCCCCCcCCcCCCCeeccccCCHHHHHHHHHHhcCCCCcCc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999998765443
Q ss_pred CCccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE-ecCCCCcchhHHHHHHhHHHHH
Q psy10133 91 TTVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKK-VSLPHTQSSIVTYSILNQCEVA 169 (342)
Q Consensus 91 ~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~-~~~p~~~~~~~~~~~~~~~e~~ 169 (342)
. + ..+++++||||+.+ ..++++.++++++++.|+++|++|++ +.+|........+..++..|+.
T Consensus 403 l----~-------~~~lkglRIGv~~~----~~~~~v~~a~~~a~~~L~~~Ga~Vve~~~~p~~~~~~~~~~~l~~~E~~ 467 (615)
T PRK11910 403 L----S-------TDALKGKRIGLLAD----GESNEETAVIKKIKLDLQKAGATIIEGIAVGEFEQKDTDYASLLNADFK 467 (615)
T ss_pred c----C-------cccCCCCEEEEECC----CCCHHHHHHHHHHHHHHHHCCCEEEeCCCCccHHHHHHHHHHHHHHHHH
Confidence 2 1 13467899999865 25789999999999999999999998 5566544445566778889999
Q ss_pred HHhhhhcccccCCcCCCCCCChHHHHHhhhh-----hcccHHHHHHHhcccc-hhhhhchHHHHHHHHHHHHHHHHHHHH
Q psy10133 170 SNMARYTGLFYGHRVTPSVNSTDQLLAETRK-----DAFGLVVKSRILAGNY-FLLKRNYENYFLKALKVRSLIAQDFLR 243 (342)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~a~~~r~~~~~~~~~ 243 (342)
.++..|...... ...++++++..... ..+.+. .++..+.. .+. ++.+..+++.|+.+++.+++
T Consensus 468 ~~l~~yl~~~~~-----~v~sL~dl~~fn~~~~~~~~~~gq~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~ 536 (615)
T PRK11910 468 HDLNQFLQVNHS-----PMSTLESIIQFNQTNPTRNMKYGQS--ELVKSQQSTITK----QQADNLASNLIQSSQNELDS 536 (615)
T ss_pred HHHHHHHHhcCC-----CCCCHHHHHHHHhcCcccccCcCHH--HHHhhhccCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 999888642111 22345555432221 112222 11222211 111 12222355666777788888
Q ss_pred HHh-cCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCC-CCCceeEEEecCCCChHHH
Q psy10133 244 VWH-SGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSH-EKLPVSIQLMAPNFQDGLL 321 (342)
Q Consensus 244 ~~~-~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~-~glPvGiqlvg~~~~D~~L 321 (342)
+|. +++|+||+|+... ...+ .++++|+|+++||+|++. +|+|+|+||+|++|+|+.|
T Consensus 537 ~~~~~~lDalv~P~~~~-------------------~~~~--~~~~aG~PaItVP~G~~~~~GlPvGlqliG~~~sE~~L 595 (615)
T PRK11910 537 VLQKDKLDAVVTIGMGG-------------------SVMF--LAPIAGNPELTIPAGYDEESNQPISLTFITARNSDKIL 595 (615)
T ss_pred HHHHCCCcEEEeCCCCC-------------------cchh--hhhhcCCCeEEecccCCCCCCcCeEEEEECCCCCHHHH
Confidence 883 4899999996311 0012 345999999999999976 6999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccc
Q psy10133 322 LNLAHWLESQVEFNIEKL 339 (342)
Q Consensus 322 L~~a~~le~~~~~~~~~~ 339 (342)
|++|+++|++++.+.+..
T Consensus 596 L~~A~a~Eq~t~~r~~P~ 613 (615)
T PRK11910 596 LNMGYAYEQQSKNRKSPN 613 (615)
T ss_pred HHHHHHHHHhcCCCCCCC
Confidence 999999999999776554
No 30
>KOG1211|consensus
Probab=100.00 E-value=2.2e-52 Score=382.43 Aligned_cols=316 Identities=44% Similarity=0.716 Sum_probs=271.6
Q ss_pred cccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCC
Q psy10133 11 NFTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDP 90 (342)
Q Consensus 11 ~~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~ 90 (342)
.+|||+|+++||+|||||||+|+||++|||+|||||+|++|+.|++|++.++|++||+||||.|+..+++++.|.|..|.
T Consensus 171 A~aVaa~l~~~alGtDTgGSvR~PAa~~gvvG~KPT~G~~Sr~Gvip~~~SlD~vGi~a~tv~D~~~v~~~~~g~d~~d~ 250 (506)
T KOG1211|consen 171 AAAVAAGLCDFALGTDTGGSVRVPAAYCGVVGFKPTYGRVSRFGVIPLSNSLDTVGIFARTVYDAVEVLGAIVGIDELDS 250 (506)
T ss_pred HHHHHhccchhhccccCCCCccCcHHhcCccccccCcceecccccchhhhcccccchhhcccchhHHHhhhhcCCCccCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCC-CcCcc---CCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHH
Q psy10133 91 TTVQKNIS-PVTLD---QLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQC 166 (342)
Q Consensus 91 ~~~~~p~~-~~~~~---~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~ 166 (342)
.+...|.+ .+..+ ..+.+++|+|++.++.....+.++.+.+++..+.|+..|..+.++.+|........|......
T Consensus 251 ~t~~~p~~~~~~~~~~~~~~l~~~r~GIp~~~~~~~~~~~v~~~~~~~~~~l~~~~~~~~~~~lp~~~~~~~~~~~~s~~ 330 (506)
T KOG1211|consen 251 TTLAQPAPFPIVLELIGSMDLSGLRIGIPKERLVQGLSSGVLSLWEELADLLGSLGAKVNEVSLPTTINGLCGYSLSSAS 330 (506)
T ss_pred ccccCCcccccchhhcccccccccccCceeecccccccHHHHHHHHHHHHHhhcccccceeeecchhhhccccccccchh
Confidence 88887764 11111 347889999999999888888999999999999999999999999999887777777888888
Q ss_pred HHHHHhhhhcccccCCcCCCCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHH---H
Q psy10133 167 EVASNMARYTGLFYGHRVTPSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFL---R 243 (342)
Q Consensus 167 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~---~ 243 (342)
|..+++.+|++..++++.. .+...++++...|+..++.+++.|+..|+.++......+.+.++++.|+...+.+. +
T Consensus 331 ea~s~laryd~~~~~~r~~-~~~~~~~v~~~~rs~~~n~~v~~~i~~g~~~l~~~~~~~~f~~a~~~rr~i~~~~~~~~~ 409 (506)
T KOG1211|consen 331 EAASNLARYDGILYGHRRD-FKVADEEVYALSRSFGFNFEVKGRILSGNYILAKENDQDYFEKALEVRRLIQEDFNRRKA 409 (506)
T ss_pred hhhhhHHHHHHHHhhcchh-hhhccceeeeeccccccchhhcceeeccceehhhhhhHHHHHHHHHHHHHHHHhhhhccc
Confidence 9999999999998888754 44556677777778888889999999999888877777888899999998888877 4
Q ss_pred HHhcCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCCCCCCCceeEEEecCCCChHHHHH
Q psy10133 244 VWHSGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINLSHEKLPVSIQLMAPNFQDGLLLN 323 (342)
Q Consensus 244 ~~~~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~~~~glPvGiqlvg~~~~D~~LL~ 323 (342)
.+ +++|+|++|| .+++.+....+.+........+.++.++|++|+|+++||+|...+|+|+|+|++|..++|..++.
T Consensus 410 ~~-~~vD~l~~pt--~~~~~~~~~~~~~~~~~~~~~~~~~~~anlaGlP~isiP~G~~~~g~P~glqi~g~~~~e~~~~~ 486 (506)
T KOG1211|consen 410 AL-EGVDYLVTPT--APPPLYREFEKETLFAVSTLDDIFTQPANLAGLPAISIPVGLKNGGLPIGLQIMGGAFAEPTLID 486 (506)
T ss_pred cc-ccCCeeeccC--CCCcchhhhhhcccccccccccceeecccccCCCceEEeeeecCCCCceEEEeecccccchHHHH
Confidence 56 7899999999 33444443332223333334556899999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q psy10133 324 LAHWLES 330 (342)
Q Consensus 324 ~a~~le~ 330 (342)
++.++++
T Consensus 487 l~~~~~~ 493 (506)
T KOG1211|consen 487 LALAIGQ 493 (506)
T ss_pred HHHhhcc
Confidence 9999887
No 31
>PRK06565 amidase; Validated
Probab=100.00 E-value=1.4e-49 Score=374.50 Aligned_cols=323 Identities=20% Similarity=0.226 Sum_probs=211.7
Q ss_pred ccccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHHHHHHHHHHHcCCCCCCCC
Q psy10133 12 FTGQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVEDCATVYNVIAGSDHRDPT 91 (342)
Q Consensus 12 ~~~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~ 91 (342)
+|||+|+++||+|||||||||+||++|||||||||+|++|+.|++|+++++|++|||||||+|+++++++|.|.|+.|..
T Consensus 168 aAVAag~~~~alGtDtgGSIR~PAa~~GivG~KPT~G~vs~~Gv~p~~~s~D~vGp~aRsV~D~a~~l~vl~g~D~~d~~ 247 (566)
T PRK06565 168 TATAASFSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYARTMADLLEVLDVIVADDPDTRG 247 (566)
T ss_pred HHHhCCCCcceeecCCCCchhhhHHHcCeeEEeCCCCccCCCCcccccCCCCeecceeCCHHHHHHHHHHhcCCCccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999887743
Q ss_pred C---------cc----CCCCCcCc--c-CCCCCCcEEEEeccCCCCC--------------------CCHHHHHHHHHHH
Q psy10133 92 T---------VQ----KNISPVTL--D-QLDLSRLVIGVPEEYKSEH--------------------ISPEVMDTWESVL 135 (342)
Q Consensus 92 ~---------~~----~p~~~~~~--~-~~~~~~lrIg~~~~~~~~~--------------------~~~~v~~a~~~~~ 135 (342)
. .+ .+..++.. . ..+++++|||++..+++.. +++++.+++++++
T Consensus 248 ~~~~~~~~~~~p~~~~~~~~~y~~~~~~~~~l~g~RIGv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~a~ 327 (566)
T PRK06565 248 DLWRLQPWVPIPKASEVRPASYLALAAGADALKGKRFGVPRMYINADPDAGTSENPGIGGPTGQRIHTRPSVIDLWEAAR 327 (566)
T ss_pred chhhccccccCccccccCccchhhhhccccCCCCCEEEEEChhhccccccccccccccccccccccCCCHHHHHHHHHHH
Confidence 1 11 11111110 0 2457889999988764321 4789999999999
Q ss_pred HHHHHCCCEEEEecCCCCcch-hHHH-------HHHhHHHHH---------HHhhhhcccccCCcCCCCCCChHHHHHhh
Q psy10133 136 KLMAKAGAQVKKVSLPHTQSS-IVTY-------SILNQCEVA---------SNMARYTGLFYGHRVTPSVNSTDQLLAET 198 (342)
Q Consensus 136 ~~L~~~G~~v~~~~~p~~~~~-~~~~-------~~~~~~e~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (342)
+.|+++|++|+++++|..... ...+ ......|+. ..+..|.... +.. ...++.++....
T Consensus 328 ~~L~~~Ga~vv~v~~p~~~~~e~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~yL~~~-~~~---~~~sl~di~~~~ 403 (566)
T PRK06565 328 RALEAAGAEVIEVDFPLVSNCEGDRPGAPTVFNRGLVSPEFLHDELWELSGWAFDDFLRAN-GDP---KLNRLADVDGPQ 403 (566)
T ss_pred HHHHHCCCEEEEeecCCccccccccccccccccccccchhhhhccccchhHHHHHHHHHhc-CCC---CCCCHHHhhhhh
Confidence 999999999999998863211 0000 011223332 1244443221 110 223444444311
Q ss_pred hh---hcccH----HHH---HHHhc-ccchhhhhchHHHHHHHHHHHHHHHH-HHHHHH-hcCCCEEEecCCCCCCCCcc
Q psy10133 199 RK---DAFGL----VVK---SRILA-GNYFLLKRNYENYFLKALKVRSLIAQ-DFLRVW-HSGVHALVTPTTLTTAPLVS 265 (342)
Q Consensus 199 ~~---~~~~~----~~~---~~~~~-g~~~~~~~~~~~~~~~a~~~r~~~~~-~~~~~~-~~~~D~li~Pt~~~~ap~~~ 265 (342)
.. ...-+ .+. +.+.. ..+......+...+.+.++.++..++ .++++| .+++|+||+|+.+..+|...
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~e~~~~~~~lDalv~P~~~~~~~~~~ 483 (566)
T PRK06565 404 IFPHDPGTLPNREGDLAAGMDEYVNMAKRGLKSWDQIPTLPDGLRGLEKTRKLDLEDWMDGLGLDAVLFPTVADVGPADA 483 (566)
T ss_pred cccCcccccccchhhhhhhHHHHHHHhhcCCCChhhccchHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCCccccc
Confidence 00 00000 000 00000 00000000011233344444444444 456666 35899999999988887765
Q ss_pred hhhhccccc--cccccccccc-CCCCCCCCeEEecCCCC-CCCCceeEEEecCCCChHHHHHHHHHHHHhcCCCccc
Q psy10133 266 QYIQLDNRE--QCSVQDYCTQ-PANLAGCPAISVPINLS-HEKLPVSIQLMAPNFQDGLLLNLAHWLESQVEFNIEK 338 (342)
Q Consensus 266 ~~~~~~~~~--~~~~~~~~t~-~~n~~g~Pai~vP~g~~-~~glPvGiqlvg~~~~D~~LL~~a~~le~~~~~~~~~ 338 (342)
+........ ++......+. ..+.+|+|+|+||+|+. ..|||+||+|+|++|+|..||++|++||++.+.|.+.
T Consensus 484 ~~~~~~~~~~~~~g~~~~ng~~a~~~~G~P~vtVP~G~~~~~G~PvGl~~~G~a~~e~~Ll~~A~a~E~~~~~r~~p 560 (566)
T PRK06565 484 DVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDNALLRFAAAFEATGSRRMVP 560 (566)
T ss_pred cccchhhhhccccCcccccchhhHHhcCCCeeEeeccccCCCCCCeeEEeecCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 432110000 0001112233 34899999999999987 4799999999999999999999999999999877654
No 32
>KOG1212|consensus
Probab=100.00 E-value=3.9e-47 Score=351.05 Aligned_cols=310 Identities=24% Similarity=0.250 Sum_probs=216.4
Q ss_pred ccCCCCeeeeeccCCCcccccccccCceeeccCCCccCCCCcccCCC----CCCccccCCCCHHHHHHHHHHHcCCC---
Q psy10133 14 GQGPVPTIALGSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVN----SMDVPGILTRTVEDCATVYNVIAGSD--- 86 (342)
Q Consensus 14 ~Aag~~~~aiGtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~----~~d~~Gp~arsv~Dl~~~~~~l~g~~--- 86 (342)
++||.++||||||+|||||+||+|||++|+|||.+|+|..|..+... .+-++|||+|+++|+..+++++.+..
T Consensus 211 igaggS~lGiGsDigGSiRiPa~f~Gl~GlKPT~~r~~~~G~~~~~~g~~~~~~~~GPm~r~v~dl~~~L~~~i~~~~~~ 290 (560)
T KOG1212|consen 211 LGAGGSLLGIGSDIGGSIRIPAAFCGLFGLKPTPGRVSVKGHHPSVPGRETIMLVIGPMTRDVEDLVLLLRLMIGDSGPK 290 (560)
T ss_pred HhCCcceeccccccCCceeechhhccccccCCCCCeeeecCcCCCCCcccccccccCcccccHHHHHHHHHHhcCCcccc
Confidence 57889999999999999999999999999999999999999977543 34589999999999999999999954
Q ss_pred CCCCCCccCCCCCcCccCCCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHH
Q psy10133 87 HRDPTTVQKNISPVTLDQLDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQC 166 (342)
Q Consensus 87 ~~d~~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~ 166 (342)
..|+.+.+.|+.+.. ....++++||+..+++..++.|.+++|+.++++.|++.|++++++.+|........+.. ...
T Consensus 291 ~~~p~~~p~~~~~~~--y~~~~~~~ig~~~~dg~~~~~pa~~RAv~~~~~~l~~~g~~~~~f~~~~~~~~~~~~~~-~~~ 367 (560)
T KOG1212|consen 291 LLDPYPVPVKFMEVF--YKSSDKLVIGYYVDDGFFDPSPAMQRAVQETIDLLEKAGHEVVPFDLPDLKHVADMFFR-VMP 367 (560)
T ss_pred ccCCCCCCchhhhhh--hhccCCccceEEecCCCCCcCHHHHHHHHHHHHHHHhcCcceeEecCCcchHHHHHHHH-Hcc
Confidence 468888888876543 35567899999988888889999999999999999999999999999988754444433 221
Q ss_pred HHHHHh-hhhc--ccccCCcCC-CCCCChHHHHHhhhhhcccHHHHHHHhcccchhhhhchHHHHHHHHHHHHHHHHHHH
Q psy10133 167 EVASNM-ARYT--GLFYGHRVT-PSVNSTDQLLAETRKDAFGLVVKSRILAGNYFLLKRNYENYFLKALKVRSLIAQDFL 242 (342)
Q Consensus 167 e~~~~~-~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~a~~~r~~~~~~~~ 242 (342)
+....+ ..+. ..+.-.... ........++... .... ..-........ ...-....+.+..++.++.++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---l~~~-~~~~~~i~~~~---~~~~~~~~~~~~~~e~yrlk~~ 440 (560)
T KOG1212|consen 368 DDGDYISEMYLLDIGDPTLNLFVKFVELPKVFLGRS---LHSY-IVLPFCIMDAK---NSDTAELRQNYEDIESYRLKFI 440 (560)
T ss_pred cccchhhHHhhcccCccccchheeeeeccHHHHhhh---hhhh-HhHHHHHHhhc---ccchHHHHHHHHHHHHHHHHHH
Confidence 211111 1111 000000000 0011111111100 0000 00000000000 0001223334445555666665
Q ss_pred HHH-hcCCCEEEecCCCCCCCCcchhhhcccccccccccccccCCCCCCCCeEEecCCC---------------------
Q psy10133 243 RVW-HSGVHALVTPTTLTTAPLVSQYIQLDNREQCSVQDYCTQPANLAGCPAISVPINL--------------------- 300 (342)
Q Consensus 243 ~~~-~~~~D~li~Pt~~~~ap~~~~~~~~~~~~~~~~~~~~t~~~n~~g~Pai~vP~g~--------------------- 300 (342)
..| ..+.||||||+++.+||+|+...... ....||.+||++|+||++||++.
T Consensus 441 ~~~~~~~~dVll~Ps~~~pA~~h~~P~~~~------~~~~Yt~LfN~Ld~Pag~vpvt~v~~~d~~~~~~~~~D~~~~~~ 514 (560)
T KOG1212|consen 441 LYWLLGKDDVLICPSFPTPAPPHNYPLLLV------NGFSYTGLFNVLDFPAGVVPVTTVTQKDEKEEEYPMNDKWATKV 514 (560)
T ss_pred HHHHcCCCCEEEeCCCCCCCCcCCCchhhc------cchhHHHHHHhccCCcccccccccchhhhcccccccccHHHHhC
Confidence 555 36899999999999999998643211 14469999999999999999863
Q ss_pred -----CCCCCceeEEEecCCCChHHHHHHHHHHHHhcC-CCcccc
Q psy10133 301 -----SHEKLPVSIQLMAPNFQDGLLLNLAHWLESQVE-FNIEKL 339 (342)
Q Consensus 301 -----~~~glPvGiqlvg~~~~D~~LL~~a~~le~~~~-~~~~~~ 339 (342)
...|||+|||++|.+|+|+.||++|+.+|+.++ |-++..
T Consensus 515 ~~g~~~s~GlPigVQVVa~p~~delcL~va~~lE~~~gg~~~p~~ 559 (560)
T KOG1212|consen 515 PKGSLDSRGLPIGVQVVANPNQDELCLAVARELERKFGGWVRPGP 559 (560)
T ss_pred cccccCCCCCceeEEEecCCCchHHHHHHHHHHHHHhCCccCCCC
Confidence 357999999999999999999999999999884 766643
No 33
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=63.98 E-value=74 Score=26.97 Aligned_cols=43 Identities=23% Similarity=0.161 Sum_probs=32.1
Q ss_pred CcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCc
Q psy10133 109 RLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQ 154 (342)
Q Consensus 109 ~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~ 154 (342)
+.||.+.+.... +.+.+.=++++.+.|+++|.++.++++....
T Consensus 32 ~~~i~FIPtAs~---~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~ 74 (224)
T COG3340 32 RKTIAFIPTASV---DSEDDFYVEKVRNALAKLGLEVSELHLSKPP 74 (224)
T ss_pred CceEEEEecCcc---ccchHHHHHHHHHHHHHcCCeeeeeeccCCC
Confidence 559998776553 3455556677888899999999999876543
No 34
>COG1049 AcnB Aconitase B [Energy production and conversion]
Probab=58.22 E-value=4.2 Score=39.41 Aligned_cols=38 Identities=34% Similarity=0.550 Sum_probs=27.0
Q ss_pred cccCceeeccCCCccCCCCcccCCCCCCccccCCCC-HHHHH
Q psy10133 36 SYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRT-VEDCA 76 (342)
Q Consensus 36 a~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~ars-v~Dl~ 76 (342)
..|||-|+||..---|. +..-.|+|+.|||+|+ ++|++
T Consensus 382 rAcGv~girpGtycepk---mttVGSQDTTGpMTrdElk~lA 420 (852)
T COG1049 382 RACGVPGIRPGTYCEPK---MTTVGSQDTTGPMTRDELKDLA 420 (852)
T ss_pred hccCCccccCCCcccce---eeeeccccCCCCccHHHHHHHH
Confidence 47999999997654443 3344689999999997 34443
No 35
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=56.22 E-value=40 Score=31.85 Aligned_cols=36 Identities=22% Similarity=0.182 Sum_probs=26.5
Q ss_pred CCCcEEEEecc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecC
Q psy10133 107 LSRLVIGVPEE-YKSEHISPEVMDTWESVLKLMAKAGAQVKKVSL 150 (342)
Q Consensus 107 ~~~lrIg~~~~-~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~ 150 (342)
..+.||+|-.+ .|.+ -+.+.++.|+++|++++.+++
T Consensus 243 ~~~~rIAVA~D~AF~F--------yY~~nl~~Lr~~GAelv~FSP 279 (451)
T COG1797 243 PLGVRIAVARDAAFNF--------YYPENLELLREAGAELVFFSP 279 (451)
T ss_pred CcCceEEEEecchhcc--------ccHHHHHHHHHCCCEEEEeCC
Confidence 34479999654 3333 346678889999999999985
No 36
>PRK15468 carboxysome structural protein EutS; Provisional
Probab=44.19 E-value=64 Score=23.93 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=45.2
Q ss_pred CccccCCCCHHHHHHHHHHHcCCCCCCCCCccCCCCCcCccCCCCCCcEEEEeccCCCC----CCCHHHHHHHHHHHHHH
Q psy10133 63 DVPGILTRTVEDCATVYNVIAGSDHRDPTTVQKNISPVTLDQLDLSRLVIGVPEEYKSE----HISPEVMDTWESVLKLM 138 (342)
Q Consensus 63 d~~Gp~arsv~Dl~~~~~~l~g~~~~d~~~~~~p~~~~~~~~~~~~~lrIg~~~~~~~~----~~~~~v~~a~~~~~~~L 138 (342)
+.+|.|+-|....+.+..=++ ....+..||+.+.|.+. .--.+|+.+++++++.|
T Consensus 39 ~AIGIlTiTP~E~aIIAaDIA---------------------~Kaa~V~igF~DRFsGslvitGdvs~Ve~Al~~V~~~l 97 (111)
T PRK15468 39 GAIGIMTLTPGETAMIAGDLA---------------------LKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGL 97 (111)
T ss_pred CceEEEEeCcchHHHHHHHhh---------------------hhccCcEEeeeeccceeEEEEccHHHHHHHHHHHHHHH
Confidence 477777777776666553333 11235678998776542 23478999999999999
Q ss_pred HH-CCCEEEEe
Q psy10133 139 AK-AGAQVKKV 148 (342)
Q Consensus 139 ~~-~G~~v~~~ 148 (342)
++ +|+.+.++
T Consensus 98 ~~~L~F~~~~i 108 (111)
T PRK15468 98 GRLLNYTLCEM 108 (111)
T ss_pred HhhcCcccccc
Confidence 98 89887664
No 37
>COG3603 Uncharacterized conserved protein [Function unknown]
Probab=43.65 E-value=18 Score=27.30 Aligned_cols=18 Identities=28% Similarity=0.460 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHCCCEEE
Q psy10133 129 DTWESVLKLMAKAGAQVK 146 (342)
Q Consensus 129 ~a~~~~~~~L~~~G~~v~ 146 (342)
+.+++++++|+++||+|.
T Consensus 110 ~dLekAv~~L~eaGhev~ 127 (128)
T COG3603 110 EDLEKAVKALEEAGHEVL 127 (128)
T ss_pred hhHHHHHHHHHHcCCccc
Confidence 457889999999999974
No 38
>PF12965 DUF3854: Domain of unknown function (DUF3854); InterPro: IPR024385 This is a family of uncharacterised proteins, found by clustering human gut metagenomic sequences [].
Probab=39.70 E-value=1e+02 Score=23.87 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=31.5
Q ss_pred CcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Q psy10133 109 RLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPH 152 (342)
Q Consensus 109 ~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~ 152 (342)
...|.+-.+ .-......|.+++.+..+.|++.|++|.-+..|.
T Consensus 70 ~v~iaFD~D-~~~~Tn~~V~~a~~~l~~~L~~~G~~v~~~~w~~ 112 (130)
T PF12965_consen 70 EVYIAFDAD-TKPKTNKNVRRAIKRLGKLLKEAGCKVKIITWPP 112 (130)
T ss_pred eEEEEecCC-CccchhHHHHHHHHHHHHHHHHCCCEEEEEEeCC
Confidence 344555333 2223568999999999999999999998887763
No 39
>PF00885 DMRL_synthase: 6,7-dimethyl-8-ribityllumazine synthase; InterPro: IPR002180 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase) catalyses the biosynthesis of riboflavin according to the reaction: 2 6,7-dimethyl-8-(1-D-ribityl)lumazine = riboflavin + 4-(1-D-ribitylamino)-5-amino-2,6-dihydroxypyrimidine. The biosynthesis of one riboflavin molecule requires one molecule of GTP and two molecules of ribulose 5-phosphate as substrates. The final step in the biosynthesis of the vitamin involves the dismutation of 6,7-dimethyl-8-ribityllumazine catalyzed by riboflavin synthase. The second product, 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione, is recycled in the biosynthetic pathway by 6,7-dimethyl-8-ribityllumazine synthase []. N-[2,4-dioxo-6-d-ribitylamino-1,2,3,4-tetrahydropyrimidin-5-yl]oxalamic acid derivatives inhibit riboflavin synthase []. This family includes the beta chain of 6,7-dimethyl-8-ribityllumazine synthase 2.5.1.9 from EC. The family also includes a subfamily of distant archaebacterial proteins that may also have the same function for example O28856 from SWISSPROT.; GO: 0009231 riboflavin biosynthetic process, 0009349 riboflavin synthase complex; PDB: 2O6H_D 1C41_C 2OBX_H 1VSX_H 1VSW_3 3JV8_C 3MK3_r 3NQ4_G 2A58_A 2A57_D ....
Probab=36.47 E-value=76 Score=25.06 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=32.2
Q ss_pred CCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCC---EEEEecCCCCc
Q psy10133 108 SRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGA---QVKKVSLPHTQ 154 (342)
Q Consensus 108 ~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~---~v~~~~~p~~~ 154 (342)
+++||++...-+. ..-+.+.++.+.+.|++.|+ ++..+..|...
T Consensus 2 ~~~ri~IV~s~~n---~~i~~~ll~~a~~~l~~~g~~~~~i~~~~VPGa~ 48 (144)
T PF00885_consen 2 SGLRIAIVVSRFN---EEITDRLLEGALEELKRHGVAEENIEVIRVPGAF 48 (144)
T ss_dssp TTEEEEEEEESTT---HHHHHHHHHHHHHHHHHTTTTGGCEEEEEESSGG
T ss_pred CCCEEEEEEEecc---HHHHHHHHHHHHHHHHHcCCCccceEEEEcCCHH
Confidence 4789999876442 24556777889999999998 67777767643
No 40
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=33.81 E-value=20 Score=25.14 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=16.2
Q ss_pred HHHHHHHHHHCCCEEEEecC
Q psy10133 131 WESVLKLMAKAGAQVKKVSL 150 (342)
Q Consensus 131 ~~~~~~~L~~~G~~v~~~~~ 150 (342)
+....+.|++.|++|+++.-
T Consensus 10 Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 10 LSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred chHHHHHHHHCCCEEEecCC
Confidence 45567789999999998764
No 41
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=33.08 E-value=59 Score=22.77 Aligned_cols=22 Identities=9% Similarity=0.175 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHCCCEEEEec
Q psy10133 128 MDTWESVLKLMAKAGAQVKKVS 149 (342)
Q Consensus 128 ~~a~~~~~~~L~~~G~~v~~~~ 149 (342)
+.++.+.++.|++.|++|..+.
T Consensus 33 RtaVwK~Iq~Lr~~G~~I~s~~ 54 (79)
T COG1654 33 RTAVWKHIQQLREEGVDIESVR 54 (79)
T ss_pred HHHHHHHHHHHHHhCCceEecC
Confidence 4788899999999999987653
No 42
>PF14359 DUF4406: Domain of unknown function (DUF4406)
Probab=30.62 E-value=85 Score=22.61 Aligned_cols=24 Identities=13% Similarity=0.120 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEE
Q psy10133 124 SPEVMDTWESVLKLMAKAGAQVKK 147 (342)
Q Consensus 124 ~~~v~~a~~~~~~~L~~~G~~v~~ 147 (342)
....+.++.++.+.|++.|++|+.
T Consensus 11 ~~~N~~~f~~~a~~L~~~G~~vvn 34 (92)
T PF14359_consen 11 PDYNRPAFNAAAKRLRAKGYEVVN 34 (92)
T ss_pred cchHHHHHHHHHHHHHHCCCEEeC
Confidence 355678999999999999999864
No 43
>PRK03094 hypothetical protein; Provisional
Probab=30.39 E-value=32 Score=24.09 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=16.1
Q ss_pred HHHHHHHHHHCCCEEEEecC
Q psy10133 131 WESVLKLMAKAGAQVKKVSL 150 (342)
Q Consensus 131 ~~~~~~~L~~~G~~v~~~~~ 150 (342)
+....+.|++.|++|+++.-
T Consensus 10 Ls~i~~~L~~~GYeVv~l~~ 29 (80)
T PRK03094 10 LTDVQQALKQKGYEVVQLRS 29 (80)
T ss_pred cHHHHHHHHHCCCEEEecCc
Confidence 45567789999999998864
No 44
>PF06953 ArsD: Arsenical resistance operon trans-acting repressor ArsD; InterPro: IPR010712 This family consists of several bacterial arsenical resistance operon trans-acting repressor ArsD proteins. ArsD is a trans-acting repressor of the arsRDABC operon that confers resistance to arsenicals and antimonials in Escherichia coli. It possesses two-pairs of vicinal cysteine residues, Cys(12)-Cys(13) and Cys(112)-Cys(113), that potentially form separate binding sites for the metalloids that trigger dissociation of ArsD from the operon. However, as a homodimer it has four vicinal cysteine pairs [].; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent, 0046685 response to arsenic-containing substance; PDB: 3MWH_A 3KGK_A 3KTB_B.
Probab=30.38 E-value=2e+02 Score=22.02 Aligned_cols=33 Identities=18% Similarity=0.488 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcc
Q psy10133 122 HISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQS 155 (342)
Q Consensus 122 ~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~ 155 (342)
.++++..+ +...++.|+++|++|.+.++.....
T Consensus 21 ~vd~eL~~-~a~~~~~Lk~~gv~v~RyNL~~~P~ 53 (123)
T PF06953_consen 21 SVDPELVR-FAADLDWLKEQGVEVERYNLAQNPQ 53 (123)
T ss_dssp S--HHHHH-HHHHHHHHHHTT-EEEEEETTT-TT
T ss_pred CCCHHHHH-HHHHHHHHHhCCceEEEEccccCHH
Confidence 45666654 6778999999999999999876543
No 45
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=30.32 E-value=69 Score=19.27 Aligned_cols=20 Identities=20% Similarity=0.333 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHHHHCC
Q psy10133 123 ISPEVMDTWESVLKLMAKAG 142 (342)
Q Consensus 123 ~~~~v~~a~~~~~~~L~~~G 142 (342)
-||+|++++.-.+..|+..|
T Consensus 21 ~DpdvqrgL~~ll~~lk~lG 40 (42)
T PF07849_consen 21 RDPDVQRGLGFLLAFLKALG 40 (42)
T ss_pred cCHHHHHHHHHHHHHHHHHc
Confidence 48999999999999998876
No 46
>PLN02404 6,7-dimethyl-8-ribityllumazine synthase
Probab=27.99 E-value=1.8e+02 Score=22.90 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=29.7
Q ss_pred CCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCE---EEEecCCC
Q psy10133 107 LSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQ---VKKVSLPH 152 (342)
Q Consensus 107 ~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~---v~~~~~p~ 152 (342)
..++||++...-+. +.=+.+.++.+.+.|++.|++ +.-+..|-
T Consensus 5 ~~~~ri~IV~s~fn---~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPG 50 (141)
T PLN02404 5 GEGLRFGVVVARFN---EIITKNLLEGALETFKRYSVKEENIDVVWVPG 50 (141)
T ss_pred CCCCEEEEEEecCc---HHHHHHHHHHHHHHHHHcCCCccceEEEEcCc
Confidence 35689999776443 245567778899999999975 34444454
No 47
>PF10432 bact-PGI_C: Bacterial phospho-glucose isomerase C-terminal region; InterPro: IPR019490 Phosphoglucose isomerase (PGI) catalyses the interconversion of phosphoglucose and phosphofructose, and is a component of many sugar metabolic pathways. In some archaea and bacteria PGI activity occurs via a bifunctional enzyme that also exhibits phosphomannose isomerase (PMI) activity. Though not closely related to eukaryotic PGIs, the bifunctional enzyme is similar enough that the sequence includes the cluster of threonines and serines that forms the sugar phosphate-binding site in conventional PGI. This entry represents the C-terminal half of the bifunctional PGI/PMI enzyme, which contains many of the active catalytic site residues. The enzyme is thought to use the same catalytic mechanisms for both glucose ring-opening and isomerisation for the interconversion of glucose 6-phosphate to fructose 6-phosphate [].; GO: 0004347 glucose-6-phosphate isomerase activity, 0004476 mannose-6-phosphate isomerase activity; PDB: 1TZB_A 1X9H_A 1TZC_B 1X9I_A 1WIW_A.
Probab=25.32 E-value=3.5e+02 Score=21.52 Aligned_cols=58 Identities=16% Similarity=0.109 Sum_probs=37.2
Q ss_pred CCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEecCCCCcchhHHHHHHhHHHH
Q psy10133 108 SRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKKVSLPHTQSSIVTYSILNQCEV 168 (342)
Q Consensus 108 ~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~~~~p~~~~~~~~~~~~~~~e~ 168 (342)
.++++-+..+.. .++.++..++.+.+.+++.|+.|+++...........+..+...++
T Consensus 71 ~~~~~v~l~d~~---~~~~~~~r~~~~~e~~~~~~~~v~~v~~~g~s~l~rl~~li~l~d~ 128 (155)
T PF10432_consen 71 GRLRVVLLRDPE---DHPRVQRRVEITREIAEDRGVRVIEVEAEGGSPLERLASLIYLGDY 128 (155)
T ss_dssp TTEEEEEEC-TC---CHHHHHHHHHHHHHHHTTCSSEEEEE--SCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEEEcCC---ccccchhhhHHHHHHHHhcCCcEEEEecCCCCHHHHHHHHHHHHHH
Confidence 456666666533 4577888888888999999999999987765544444444443343
No 48
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=25.07 E-value=2e+02 Score=25.55 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=28.5
Q ss_pred CCcEEEEeccCCCCCCC-HHHHHHHHHHHHHHHHCCCEEEEecCC
Q psy10133 108 SRLVIGVPEEYKSEHIS-PEVMDTWESVLKLMAKAGAQVKKVSLP 151 (342)
Q Consensus 108 ~~lrIg~~~~~~~~~~~-~~v~~a~~~~~~~L~~~G~~v~~~~~p 151 (342)
+++||+++-. +...+ +-.......+.+.|++.|++++.++..
T Consensus 2 ~~~~i~vl~g--g~s~e~~vsl~s~~~v~~aL~~~g~~~~~~~~~ 44 (296)
T PRK14569 2 KNEKIVVLYG--GDSPEREVSLKSGKAVLDSLISQGYDAVGVDAS 44 (296)
T ss_pred CCcEEEEEeC--CCCCchHhHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 3679999754 22222 333455567788899999999988753
No 49
>TIGR00825 EIIBC-GUT PTS system, glucitol/sorbitol-specific, IIBC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria.E. coli consists of IIA protein, a IIC protein and a IIBC protein. This family is specific for the IIBC component.
Probab=24.91 E-value=26 Score=30.87 Aligned_cols=39 Identities=31% Similarity=0.524 Sum_probs=27.2
Q ss_pred eccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCH-HHH
Q psy10133 24 GSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTV-EDC 75 (342)
Q Consensus 24 GtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv-~Dl 75 (342)
=-|.||.+| ||+|=-| |||.-.+.|...| ||||+.+ ||+
T Consensus 67 IIDCGGTlR-----CGiYPkK----~IpTINi~ptgkS----GPLA~fI~Edi 106 (331)
T TIGR00825 67 VIDCGGTLR-----CGIYPKR----RIPTINIHPTGKS----GPLAQFITEDI 106 (331)
T ss_pred EEecCCeee-----ecccccC----CCceeeeccCCCC----chhhhHhcccc
Confidence 358899999 7888544 4665555565444 9999887 654
No 50
>PF09383 NIL: NIL domain; InterPro: IPR018449 This domain is found at the C terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family. ; PDB: 2QRR_A 3CED_A 2QSW_A 3TUZ_D 3TUJ_D 3DHX_B 3TUI_H 3DHW_D.
Probab=22.97 E-value=1.2e+02 Score=20.58 Aligned_cols=20 Identities=15% Similarity=0.390 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHCCCEEEEe
Q psy10133 129 DTWESVLKLMAKAGAQVKKV 148 (342)
Q Consensus 129 ~a~~~~~~~L~~~G~~v~~~ 148 (342)
..++++++.|++.|++|+.+
T Consensus 57 ~~~~~a~~~L~~~~v~vEvl 76 (76)
T PF09383_consen 57 EEIEKAIAYLREQGVEVEVL 76 (76)
T ss_dssp HHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHCCCeEEEC
Confidence 34788899999999998753
No 51
>PF03612 EIIBC-GUT_N: Sorbitol phosphotransferase enzyme II N-terminus; InterPro: IPR011618 Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The Gut family consists only of glucitol-specific permeases, but these occur both in Gram-negative and Gram-positive bacteria. Escherichia coli consists of IIA protein, a IIC protein and a IIBC protein. This entry represents the N-terminal conserved region of the IIBC component.; GO: 0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane
Probab=22.23 E-value=37 Score=27.81 Aligned_cols=37 Identities=30% Similarity=0.502 Sum_probs=24.9
Q ss_pred eccCCCcccccccccCceeeccCCCccCCCCcccCCCCCCccccCCCCHH
Q psy10133 24 GSDTGGSTRNPASYCGVVGFKPTYGTVSRHGLIPLVNSMDVPGILTRTVE 73 (342)
Q Consensus 24 GtDtgGSiR~PAa~~Gl~g~kPt~g~is~~G~~p~~~~~d~~Gp~arsv~ 73 (342)
=-|.||.+| ||||=-| +||.-.+.|..+| ||||+.+.
T Consensus 67 VIDCGGTlR-----CGiYPkK----~IpTINi~ptGkS----GPLAkfIt 103 (183)
T PF03612_consen 67 VIDCGGTLR-----CGIYPKK----RIPTINIHPTGKS----GPLAKFIT 103 (183)
T ss_pred EEecCCcee-----ecccccc----CCceeeeeeCCCC----cchHhhcc
Confidence 358899999 7988544 4555555555444 89888754
No 52
>PRK00061 ribH 6,7-dimethyl-8-ribityllumazine synthase; Provisional
Probab=21.94 E-value=2.5e+02 Score=22.45 Aligned_cols=43 Identities=19% Similarity=0.207 Sum_probs=29.6
Q ss_pred CCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCC---CEEEEecCCC
Q psy10133 107 LSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAG---AQVKKVSLPH 152 (342)
Q Consensus 107 ~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G---~~v~~~~~p~ 152 (342)
.++.||++...-+. ..-+.+.++.+++.|++.| .++..+..|-
T Consensus 10 ~~~~riaIV~s~~n---~~i~~~l~~ga~~~l~~~gv~~~~i~v~~VPG 55 (154)
T PRK00061 10 AKGLRIGIVVARFN---DFITDALLEGALDALKRHGVSEENIDVVRVPG 55 (154)
T ss_pred CCCCEEEEEEecCc---HHHHHHHHHHHHHHHHHcCCCccceEEEECCC
Confidence 45689999876442 2345667788999999999 4455555554
No 53
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=20.82 E-value=2.2e+02 Score=26.18 Aligned_cols=39 Identities=21% Similarity=0.242 Sum_probs=25.0
Q ss_pred CCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCC--EEEEec
Q psy10133 108 SRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGA--QVKKVS 149 (342)
Q Consensus 108 ~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~--~v~~~~ 149 (342)
|..||++.+.++. -|+|-.+..++++.+.+.|+ ++++++
T Consensus 3 k~~~I~vipGDGI---GpEv~~~a~~Vl~a~~~~~~~~~~~~~~ 43 (344)
T PRK03437 3 KTMKLAVIPGDGI---GPEVVAEALKVLDAVAAGGPGVETTEYD 43 (344)
T ss_pred ceEEEEEECCCCc---cHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 4578999887764 57777777777665543244 444443
No 54
>PRK12359 flavodoxin FldB; Provisional
Probab=20.74 E-value=3.3e+02 Score=22.20 Aligned_cols=43 Identities=12% Similarity=0.085 Sum_probs=27.9
Q ss_pred CCCCCcEEEEeccCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q psy10133 105 LDLSRLVIGVPEEYKSEHISPEVMDTWESVLKLMAKAGAQVKK 147 (342)
Q Consensus 105 ~~~~~lrIg~~~~~~~~~~~~~v~~a~~~~~~~L~~~G~~v~~ 147 (342)
.+++++++++...-......+.-..++....+.|++.|++++-
T Consensus 75 ~dl~gK~vAlFG~Gd~~~y~~~f~~a~~~l~~~l~~~Ga~ivG 117 (172)
T PRK12359 75 LNLEGKIVALYGMGDQLGYGEWFLDALGMLHDKLAPKGVKFVG 117 (172)
T ss_pred CCCCCCEEEEEeCCCCccchHHHHHHHHHHHHHHHhCCCeEEe
Confidence 3467788887542111122355677888888888888888765
Done!