BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10135
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1
SV=2
Length = 568
Score = 337 bits (865), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 186/404 (46%), Positives = 245/404 (60%), Gaps = 79/404 (19%)
Query: 2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
D + KDK DRAT EQV+DPRTRMILFK+++RG+++E+NGCISTGKEANVYHAS
Sbjct: 145 DMYRIKDKADRATVEQVLDPRTRMILFKMLTRGIITEINGCISTGKEANVYHASTANG-- 202
Query: 62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
+ AIKI+KTSILVFKDRDKYV+GEFRFRHGYCK NPRKMV+TWAEKEMRNL
Sbjct: 203 -------ESRAIKIYKTSILVFKDRDKYVSGEFRFRHGYCKGNPRKMVKTWAEKEMRNLI 255
Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLY 181
R+ + + P+PI+L+SHVL+M+FIG+D PA LK+ L+ES A +LY + + M R+Y
Sbjct: 256 RLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRRMY 315
Query: 182 NKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPV-- 239
LVHADLSE+NML H ++IIDV+QSVEHDHPHAL+FLRKDC NV F + + V
Sbjct: 316 QDARLVHADLSEFNMLYHGGGVYIIDVSQSVEHDHPHALEFLRKDCANVNDFFMRHSVAV 375
Query: 240 ----------------------------------------SDD--DEKIFKKWDSDYVTS 257
S D DE++FK+ Y+
Sbjct: 376 MTVRELFEFVTDPSITHENMDAYLSKAMEIASQRTKEERSSQDHVDEEVFKRA---YIPR 432
Query: 258 SDEDEENVVDFERDINLI-------KSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQD 310
+ + +N +ERD+++I + + ++YQ + GL DLSG + +P LL
Sbjct: 433 TLNEVKN---YERDMDIIMKLKEEDMAMNAQQDNILYQTVTGLKKDLSGVQKVPALLENQ 489
Query: 311 ------KDDEETGESSEGDSDSGSEEERGSKFVNSARPRDETAE 348
D E+ G S D+DS EE+G + ARP+ T +
Sbjct: 490 VEERTCSDSEDIGSSECSDTDS---EEQG----DHARPKKHTTD 526
>sp|Q54VD8|RIO1_DICDI Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum
GN=rio1 PE=3 SV=1
Length = 574
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/335 (48%), Positives = 221/335 (65%), Gaps = 49/335 (14%)
Query: 4 IKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHA-SPGANYKI 62
++ DK DRAT EQV+DPRTR++LFK+I++G SE+NGCISTGKEANVYHA +P
Sbjct: 150 VRIVDKEDRATTEQVLDPRTRLMLFKMINKGAFSEINGCISTGKEANVYHAFTPN----- 204
Query: 63 ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
E+E A+K++KTSILVFKDRD+YV GEFRFR GY K NPRKMV+ WAEKE RNLTR
Sbjct: 205 -----EEERAVKVYKTSILVFKDRDRYVTGEFRFRRGYSKHNPRKMVKVWAEKEFRNLTR 259
Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYN 182
+ + G+ P P++L++H+L+MTFIG+DG+ A +LKD +++ +Y +C+ MM L++
Sbjct: 260 LKNAGIPCPTPLILRNHILVMTFIGKDGYAAPRLKDATVSQEKFGVIYLDCIKMMRTLFH 319
Query: 183 KCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVT----------- 231
KC LVHADLSEYNML +K L+IIDV+QSVEHDHPH+L FLR DC NVT
Sbjct: 320 KCRLVHADLSEYNMLYYKNQLYIIDVSQSVEHDHPHSLDFLRMDCSNVTDFFRKKEVNTM 379
Query: 232 ------VFVILNPVSDDD-----EKIFKKWDSDYVTSSDE--DEE------------NVV 266
F+ +++D+ EK+ +K S T+ ++ EE ++
Sbjct: 380 FIQELFEFITDLTITEDNIDQYLEKMLEKIQSRGETTDEQKIQEEVFRNAYIPRTLDQII 439
Query: 267 DFERDINLIKSGQGSSNTLIYQNIVGLNADLSGPK 301
D +RD+ I+ G+G + YQN+ GL+ DL K
Sbjct: 440 DLDRDMEKIERGEGRD--IFYQNLTGLSKDLQNIK 472
>sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2
SV=2
Length = 567
Score = 315 bits (807), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 178/372 (47%), Positives = 228/372 (61%), Gaps = 60/372 (16%)
Query: 5 KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHAS-PGANYKIE 63
+ KDK DRAT EQV+DPRTRMILFKL+ + +SE++GCISTGKEANVY+AS P +
Sbjct: 147 RIKDKADRATVEQVLDPRTRMILFKLLHKDHISEIHGCISTGKEANVYYASTPSGESR-- 204
Query: 64 NLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRM 123
AIKI+KTSIL+FKDRDKYV GEFRFR GYCK NPRKMVRTWAEKEMRNL R+
Sbjct: 205 --------AIKIYKTSILMFKDRDKYVTGEFRFRRGYCKGNPRKMVRTWAEKEMRNLCRL 256
Query: 124 YSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNK 183
+ + P+PI L+SHVLLM FIG+D PA LK+ L+ES A +LY + + M ++Y
Sbjct: 257 KTANIPCPEPIRLRSHVLLMGFIGKDDMPAPLLKNVQLSESKARELYLQVIQYMRKMYQD 316
Query: 184 CHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF---------- 233
LVHADLSE+NML H ++IIDV+QSVEHDHPHAL+FLRKDC NV F
Sbjct: 317 ARLVHADLSEFNMLYHGGDVYIIDVSQSVEHDHPHALEFLRKDCTNVNDFFSKHAVAVMT 376
Query: 234 ------VILNPVSDDDE---------KIFKKWDSDYVTSSDE-DEE------------NV 265
+ +P D +I + + TS D DEE V
Sbjct: 377 VRELFDFVTDPSITADNMDAYLEKAMEIASQRTKEEKTSQDHVDEEVFKQAYIPRTLNEV 436
Query: 266 VDFERDINL---IKSGQGSSNT----LIYQNIVGLNADLSGPKLIPELLAQDKDDEETGE 318
++ERD+++ +K + NT ++YQ ++GL DLSG + +P LL + E E
Sbjct: 437 KNYERDVDIMMRLKEEDMALNTQQDNILYQTVMGLKKDLSGVQKVPALL----ESEVKEE 492
Query: 319 SSEGDSDSGSEE 330
+ G D+G E
Sbjct: 493 TCFGSDDAGGSE 504
>sp|O42650|RIO1_SCHPO Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio1 PE=3 SV=2
Length = 497
Score = 301 bits (771), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 175/387 (45%), Positives = 228/387 (58%), Gaps = 71/387 (18%)
Query: 2 DRIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYK 61
D+ KDK DRAT+EQV+DPRTRMIL KLI+ G +SE+NGCISTGKEANVYHA+
Sbjct: 85 DKSSIKDKSDRATSEQVLDPRTRMILLKLINNGTISEINGCISTGKEANVYHATN----- 139
Query: 62 IENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT 121
E K FAIKI+KTSILVFKDRD+YV+GEFRFRHGY K+NPRKMVR WAEKE+RNL
Sbjct: 140 ----EDGKHFAIKIYKTSILVFKDRDRYVSGEFRFRHGYNKRNPRKMVRLWAEKEIRNLK 195
Query: 122 RMYSEGLNVPKPILLKSHVLLMTFIGED-GWPAAKLKDTPLTESGACKLYRECVVMMWRL 180
R+ + G+ P+PILLK HVLLM+F+G+ GW KLKD +T A KLY+ M L
Sbjct: 196 RVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRIL 255
Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNV-TVFVILNPV 239
++ CHLVHADLSEYN+L HK ++ IDV+QSVEHDHP ++ FLR D N+ T F LN
Sbjct: 256 FHVCHLVHADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTFFRRLNAG 315
Query: 240 SDDDEKIFKKWDSDYVTSSDEDE----------------------------------ENV 265
++FK ++T E + V
Sbjct: 316 CLSLPQLFK-----FITEEGSCEKEAMKTRLNAIYEEEPTTEEYEEEFLKTYVPRTLDEV 370
Query: 266 VDFERDINLIKSGQGSSNTLIYQNIVGLNADLS-----------GPKLIPELLAQDKDDE 314
D +RD ++ +G N+L+Y+++ LN D +++P ++ DD
Sbjct: 371 YDIDRDTEIVNAG--GVNSLVYKHL--LNTDFQKLDLNDTTKNQNDQILPNETSESDDDA 426
Query: 315 ETGESSEGDSDSGSEEERGSKFVNSAR 341
+ S E +EEER S +SA+
Sbjct: 427 NSISSME------NEEERTSDSKSSAK 447
>sp|Q9DBU3|RIOK3_MOUSE Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2
SV=3
Length = 519
Score = 241 bits (615), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 162/228 (71%), Gaps = 2/228 (0%)
Query: 8 DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
+K + +TAE+ +DP+TR++++K+++ GM+ + GCISTGKE+ V+HA G+ + K +
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEDEKEDGK 281
Query: 66 ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
+ E AIK+FKT++ FK+RDKY+ +FRF+ + K NPRK++R WAEKEM NLTRM
Sbjct: 282 AIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQK 341
Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
G+ P +LLK H+L+M+FIG D PA KLK+ L+ Y + + +M +LYN+C
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSNEEMKDAYYQTLHLMQQLYNECT 401
Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
LVHADLSEYNML H +++IDV+QSVE HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449
>sp|Q12196|RIO1_YEAST Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO1 PE=1 SV=1
Length = 484
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 125/247 (50%), Positives = 165/247 (66%), Gaps = 16/247 (6%)
Query: 3 RIKT-KDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANY- 60
R KT KDK +RAT E V+DPRT L +++RG+++++NGC+STGKEANVYHA G
Sbjct: 41 RAKTSKDKANRATVENVLDPRTMRFLKSMVTRGVIADLNGCLSTGKEANVYHAFAGTGKA 100
Query: 61 --------KIENLELE---KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMV 109
+ E LE + E+AIKI+KTSILVFKDR++YV+GEFRFR+ + NPRKM+
Sbjct: 101 PVIDEETGQYEVLETDGSRAEYAIKIYKTSILVFKDRERYVDGEFRFRNSRSQHNPRKMI 160
Query: 110 RTWAEKEMRNLTRMYSEG-LNVPKPILLKSHVLLMTFIGE-DGWPAAKLKDTPLTESGAC 167
+ WAEKE RNL R+Y G + PKPI +K++VL+M F+ +G+ + KLKD P
Sbjct: 161 KIWAEKEFRNLKRIYQSGVIPAPKPIEVKNNVLVMEFLSRGNGFASPKLKDYPYKNRDEI 220
Query: 168 -KLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKD 226
Y V M LY C LVHADLSEYN +VH L++IDV+QSVE +HP +L FLR D
Sbjct: 221 FHYYHTMVAYMRLLYQVCRLVHADLSEYNTIVHDDKLYMIDVSQSVEPEHPMSLDFLRMD 280
Query: 227 CDNVTVF 233
NV ++
Sbjct: 281 IKNVNLY 287
>sp|Q1RMT7|RIOK3_BOVIN Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2
SV=1
Length = 519
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 163/228 (71%), Gaps = 2/228 (0%)
Query: 8 DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
+K + +TAE+ +DP+TR++++K+++ GM+ + GCISTGKE+ V+HA G+ + K ++
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDGKEDSK 281
Query: 66 ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
+ E AIK+FKT++ FK+RDKY+ +FRF+ + K NPRK++R WAEKEM NLTRM
Sbjct: 282 VIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQR 341
Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
G+ P +LLK H+L+M+FIG D PA KLK+ L+ Y + + +M +LY++C
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLSSEEMKDAYYQTLHLMQQLYDECT 401
Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
LVHADLSEYNML H +++IDV+QSVE HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449
>sp|O14730|RIOK3_HUMAN Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1
SV=2
Length = 519
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 162/228 (71%), Gaps = 2/228 (0%)
Query: 8 DKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGA--NYKIENL 65
+K + +TAE+ +DP+TR++++K+++ GM+ + GCISTGKE+ V+HA G+ + K ++
Sbjct: 222 EKKEHSTAEKAVDPKTRLLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSK 281
Query: 66 ELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYS 125
+ E AIK+FKT++ FK+RDKY+ +FRF+ + K NPRK++R WAEKEM NL RM
Sbjct: 282 VIPTECAIKVFKTTLNEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQR 341
Query: 126 EGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH 185
G+ P +LLK H+L+M+FIG D PA KLK+ L + Y + + +M +LY++C
Sbjct: 342 AGIPCPTVVLLKKHILVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECT 401
Query: 186 LVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
LVHADLSEYNML H +++IDV+QSVE HPH L+FL +DC NV+ F
Sbjct: 402 LVHADLSEYNMLWHAGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQF 449
>sp|Q8SVI7|RIO1_ENCCU Probable serine/threonine-protein kinase RIO1 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=RIO1 PE=3
SV=1
Length = 409
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 191/345 (55%), Gaps = 29/345 (8%)
Query: 5 KTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVY--HASPGANYK- 61
+ KDK DRAT ++V+D RT +L +L +RG + + G + TGKE+NVY AS K
Sbjct: 31 RKKDKSDRATVDKVLDKRTLKVLERLQARGKLVNLQGSLCTGKESNVYLGEASTSLCSKF 90
Query: 62 IENLELEKE----------FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRT 111
I+N E +KIFKTSI+ F+DR++Y+ E RF+ +C N RK+++
Sbjct: 91 IKNRYSVTEEPGREGQIVPVVVKIFKTSIMSFRDRERYIRSEKRFQR-FCTSNSRKLIKV 149
Query: 112 WAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYR 171
WAEKE+RNL R+ + G+ P+PI LK+++L+MT IG A +L+D + + C Y+
Sbjct: 150 WAEKEVRNLKRLNNAGIPSPEPIYLKNNILVMTQIGRCSEVAPRLRDASIKDLEGC--YQ 207
Query: 172 ECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVT 231
+CV ++ +Y K LVHADLSE+N+L + +++IDV QSVE DH +A +FL D +N+
Sbjct: 208 QCVKIIRDMYKKAGLVHADLSEFNLLYFEGVVYVIDVGQSVEIDHDNAQRFLIMDINNIN 267
Query: 232 VFVILNPVS-DDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGSSNTLIYQNI 290
F VS +F++ + + +D +D RD + N +++
Sbjct: 268 SFFSRKGVSVAKGNDLFEEISGNVIPLYLKD----IDIGRDAFIPSRVSEVGNE---EDL 320
Query: 291 VGLNADLSGPKLIPELLAQDKDDEETGESSEGDSDS--GSEEERG 333
+ AD + D D TGE+S DSD+ G+ E RG
Sbjct: 321 LAFAADSRSREFGS---TTDSDLSSTGEASVEDSDASLGATESRG 362
>sp|P34649|YOT3_CAEEL Putative RIO-type serine/threonine-protein kinase 3
OS=Caenorhabditis elegans GN=riok-3 PE=3 SV=1
Length = 510
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 148/235 (62%), Gaps = 19/235 (8%)
Query: 3 RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
+++ KDK ++AT + +D TR++L K I++G+ V+G I+TGKE+ V HA+ +
Sbjct: 213 QMRNKDKEEKATMDTSVDSDTRLLLLKWINQGVFDSVDGIIATGKESAVLHAAQDS---- 268
Query: 63 ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
+AIK++KT++ FK+R +YV +FRF KNPR +++ WAE+E NL+R
Sbjct: 269 -----ATSYAIKVYKTTLSEFKNRSEYVKDDFRF------KNPRGVLKIWAEREFMNLSR 317
Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTP---LTESGACKLYRECVVMMWR 179
M GL P+P+ ++ +VL+M+F+G+ G A +LK+ T+ +Y + +M R
Sbjct: 318 MAKHGLPCPQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDDERRNVYDQVQSIMCR 377
Query: 180 LYNKCHLVHADLSEYNMLVHKAT-LFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
+Y +C LVHADLSE+N+L+ + +IDV+Q+++ HP +LQFL +D N+ F
Sbjct: 378 MYKECLLVHADLSEFNLLLTPDNKVHVIDVSQAMDLSHPRSLQFLTRDIQNIITF 432
>sp|O28471|RIO1_ARCFU RIO-type serine/threonine-protein kinase Rio1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio1 PE=1 SV=1
Length = 258
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 138/249 (55%), Gaps = 11/249 (4%)
Query: 3 RIKTKDKHDRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKI 62
RIK KD +R +V+D RT L+KL ++G ++ + G ISTGKEANV++A + K
Sbjct: 15 RIKEKDGEERKIYAEVLDGRTLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKP 74
Query: 63 ENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTR 122
+ A+KI++ F D+Y+ G+ RF + +P++ V W EKE RNL R
Sbjct: 75 VAM------AVKIYRIETSEFDKMDEYLYGDERFDM--RRISPKEKVFIWTEKEFRNLER 126
Query: 123 MYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDT--PLTESGACKLYRECVVMMWRL 180
G++VP+P +VLLM FIGED PA L + L E ++ + V + RL
Sbjct: 127 AKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRL 186
Query: 181 YNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVS 240
Y + LVHADLSEYN++ + ++ ID+ Q+V HP A +L +D N+ F V
Sbjct: 187 YQEAELVHADLSEYNIM-YIDKVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSKYGVK 245
Query: 241 DDDEKIFKK 249
D E++ K+
Sbjct: 246 ADFEEMLKE 254
>sp|Q57886|RIO1_METJA RIO-type serine/threonine-protein kinase Rio1 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio1 PE=3 SV=1
Length = 290
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 122/224 (54%), Gaps = 17/224 (7%)
Query: 11 DRATAEQVMDPRTRMILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKE 70
D TA +V D RT M LF L++ ++E G +++GKEA V+ A G Y+
Sbjct: 50 DLKTANEVFDKRTLMTLFSLLAGKHLTEYIGIVNSGKEAVVFKARKGKFYR--------- 100
Query: 71 FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNV 130
A+K+++ + FK KY+ G+ RF K + R+++ W EKE RNL R SE +N
Sbjct: 101 -AVKVYRVATCDFKTMSKYIQGDPRFHLR--KSSRRQIIHAWVEKEFRNLRRA-SEIINA 156
Query: 131 PKPILLKSHVLLMTFIGEDGWPAAKLKDTP-LTESGACKLYRECVVMMWRLYNKCHLVHA 189
PK L + +VL+M F+G G PA KLKD L K+ +E M +LY + LVH
Sbjct: 157 PKARLRRENVLVMDFVGYRGIPAPKLKDMQDLDWEKYFKIIKES---MKKLYEEGELVHG 213
Query: 190 DLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
DLSEYN+LV ID +QSV HP A L +DC N+ F
Sbjct: 214 DLSEYNILVKDDEPVFIDFSQSVITQHPLAHPLLIRDCINICNF 257
>sp|Q03021|RIO1_THEAC RIO-type serine/threonine-protein kinase Rio1 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=rio1 PE=3 SV=1
Length = 186
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 101/179 (56%), Gaps = 8/179 (4%)
Query: 68 EKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEG 127
+K A+KIFK S L F KY+ G+ RF +N +V W KE NL + +
Sbjct: 9 KKFVAVKIFKMSTLKFMSIRKYIEGDQRFSKIRIDRN--DIVPVWVRKEYTNLMALENAH 66
Query: 128 LNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLV 187
+ PKPI ++L+M++IG PA +LKD + E +Y + + M R+Y +V
Sbjct: 67 VPAPKPIGFFKNILVMSYIGTKSGPAPQLKDVEIDEG----IYDQVIDGMRRMYAN-RIV 121
Query: 188 HADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKI 246
HADLSEYNML H+ F ID+AQ+V+ DHP A +FL +D NV+ F + + D +KI
Sbjct: 122 HADLSEYNMLFHRKVYF-IDLAQAVDMDHPMAAEFLERDIVNVSNFFQKHGIETDPDKI 179
>sp|P40160|RIO2_YEAST Serine/threonine-protein kinase RIO2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO2 PE=1 SV=1
Length = 425
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 28/217 (12%)
Query: 25 MILFKLISRGMVSEVNGCISTGKEANVYHAS-PGANYKIENLELEKEFAIKIFKTSILVF 83
+ L +++R V V I GKE+++Y S N ++ + ++ +TS
Sbjct: 83 LALKTMLNRDTVYSVGNTIGVGKESDIYKVSDKNGNPRVMKIH-------RLGRTSFHSV 135
Query: 84 KDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLM 143
++ Y+ + N + R A KE + ++ +YS+G VP+P H+++M
Sbjct: 136 RNNRDYL------KKSNQGANWMHLSRLAANKEYQFMSMLYSKGFKVPEPFDNSRHIVVM 189
Query: 144 TFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV----- 198
I +G+P +L+ KLY + + + L N L+H D +E+N+++
Sbjct: 190 ELI--EGYPMRRLR----KHKNIPKLYSDLMCFIVDLANSG-LIHCDFNEFNIMIKDKLE 242
Query: 199 --HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
+ +ID Q + H A + ++D D + F
Sbjct: 243 DENDCGFVVIDFPQCISIQHQDADYYFQRDVDCIRRF 279
>sp|Q9CQS5|RIOK2_MOUSE Serine/threonine-protein kinase RIO2 OS=Mus musculus GN=Riok2 PE=1
SV=1
Length = 547
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFK 84
+ L L SR +V V + GKE+++Y AN + L L+ ++ +TS K
Sbjct: 83 LALKTLSSRQVVESVGNQMGVGKESDIYIV---ANEAGQQLALKLH---RLGRTSFRNLK 136
Query: 85 DRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMT 144
++ Y + RH + + R A KE + +Y VPKPI H ++M
Sbjct: 137 NKRDY----HKHRHNV---SWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVIME 189
Query: 145 FIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKAT-L 203
I +G+P ++ +Y E + ++ +L N L+H D +E+N+++ K +
Sbjct: 190 LI--NGYPLCQIHHV----EDPASVYDEAMELIVKLGNHG-LIHGDFNEFNLMLDKDDHI 242
Query: 204 FIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEE 263
+ID Q V HP+A + +D + F + K F Y T SD +E
Sbjct: 243 TMIDFPQMVSTSHPNAEWYFDRDVKCIREFFM---------KRFSYESELYPTFSDIRKE 293
Query: 264 NVVDFE 269
+ +D E
Sbjct: 294 DSLDVE 299
>sp|Q9BVS4|RIOK2_HUMAN Serine/threonine-protein kinase RIO2 OS=Homo sapiens GN=RIOK2 PE=1
SV=2
Length = 552
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 27/215 (12%)
Query: 25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIF---KTSIL 81
+ L L SR +V V + GKE+++Y I E ++FA+K+ +TS
Sbjct: 83 LALKTLSSRQVVESVGNQMGVGKESDIY---------IVANEEGQQFALKLHRLGRTSFR 133
Query: 82 VFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVL 141
K++ Y + RH + + R A KE + +Y VPKPI H +
Sbjct: 134 NLKNKRDY----HKHRHNV---SWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAV 186
Query: 142 LMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKA 201
+M I +G+P ++ +Y E + ++ +L N L+H D +E+N+++ ++
Sbjct: 187 VMELI--NGYPLCQIHHV----EDPASVYDEAMELIVKLANHG-LIHGDFNEFNLILDES 239
Query: 202 T-LFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI 235
+ +ID Q V HP+A + +D + F +
Sbjct: 240 DHITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFM 274
>sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2 OS=Dictyostelium discoideum
GN=rio2 PE=3 SV=1
Length = 522
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFK 84
+ L L+SRG+ S V I GKE+++Y + N +E +K+ + + FK
Sbjct: 81 LALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDN---------QEMVLKLHRLGRVSFK 131
Query: 85 DRDKYVNGEFRFRHGYCKKNPRK----MVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHV 140
+ Y K + R A KE + +Y G VP PI H
Sbjct: 132 --------TIKNNRDYLKHRKSASWLYLSRLAALKEFAYMKALYENGFPVPTPIDYNRHC 183
Query: 141 LLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH- 199
++M+ G+P ++ + K+Y + + ++ +L + L+H D +E+N+L++
Sbjct: 184 IVMS--RARGYPLTQI----VQLRHPSKVYSDLMNLIVKLAS-YGLIHGDFNEFNILIND 236
Query: 200 KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
+ + +ID Q V H +A + +D + VF
Sbjct: 237 EEEITLIDFPQMVSTSHLNAEMYFDRDVTCIRVF 270
>sp|Q9P7W5|RIO2_SCHPO Serine/threonine-protein kinase rio2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio2 PE=3 SV=2
Length = 344
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 41/220 (18%)
Query: 25 MILFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFK 84
+ L L R V V I GKE++VY + + K++ +KI + + F+
Sbjct: 83 LALKALSKRASVYSVGNQIGVGKESDVY---------VVGDQKGKQYILKIHRLGRISFR 133
Query: 85 ----DRDKYVN---GEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLK 137
+RD N G +++ + R A KE + ++ G VP PI
Sbjct: 134 SVKNNRDYLRNRKTGSWQY-----------LSRLAATKEFAFMKILHEHGFPVPAPIDHS 182
Query: 138 SHVLLMTFIGEDGWP---AAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY 194
H ++M I D +P ++D P LY+ + ++ R + + L+H D +E+
Sbjct: 183 RHCIIMEMI--DAFPLRAVTDIRDPP-------ALYQTLMDIIVR-FARNGLIHGDFNEF 232
Query: 195 NMLVHK-ATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
N++V + T +ID Q V HP A + +D + +
Sbjct: 233 NIIVREDGTAVVIDFPQMVSTSHPDAQFYFDRDVQCIVQY 272
>sp|Q58473|RIO2_METJA RIO-type serine/threonine-protein kinase Rio2 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio2 PE=3 SV=1
Length = 270
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 30 LISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKDRDKY 89
+ +G++ + + GKE +VY L +E +K K F R K
Sbjct: 58 FVKKGILKAIGNKLGVGKEGDVYTVL---------LSDGREAVLKFHKHGRTCF-TRGKR 107
Query: 90 VNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLM-TFIGE 148
G +H ++ AE+E L ++ + VP+PI H ++M +GE
Sbjct: 108 YRGYLADKHHISWLYVSRLT---AEREFEILNELFPI-VKVPEPIEWNRHAIIMGKVVGE 163
Query: 149 DGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCH------LVHADLSEYNMLV-HKA 201
+ LK L+E + + E + W++ + +H DLSE+N+L+
Sbjct: 164 E------LKRLDLSEFMSKE---EIKDLFWKIIEEVKKAYEIGYIHGDLSEFNILLDENG 214
Query: 202 TLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKI 246
IID Q+V HP A +L++D NV + + +DEKI
Sbjct: 215 DFVIIDWPQAVPKYHPDAEFYLKRDIWNVIRYFKKYKIDKEDEKI 259
>sp|O30245|RIO2_ARCFU RIO-type serine/threonine-protein kinase Rio2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio2 PE=1 SV=1
Length = 282
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 41/214 (19%)
Query: 27 LFKLISRGMVSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD- 85
L +L+ G V + + GKE+ V++ E E +K K FK
Sbjct: 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYS---------EKFGECVVKFHKVGHTSFKKV 132
Query: 86 RDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTF 145
++K G+ F +R+ A E R L ++ +GL VPK + + +LM
Sbjct: 133 KEKRDYGDLHF--------SVLAIRS-ARNEFRALQKL--QGLAVPKVYAWEGNAVLMEL 181
Query: 146 IGEDGWPAAKLK------DTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVH 199
I +++ D L E K Y +V H DLS+YN+LV
Sbjct: 182 IDAKELYRVRVENPDEVLDMILEE--VAKFYHRGIV------------HGDLSQYNVLVS 227
Query: 200 KATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
+ ++IID QSVE + L +D N+ +
Sbjct: 228 EEGIWIIDFPQSVEVGEEGWREILERDVRNIITY 261
>sp|F7B645|TM231_XENTR Transmembrane protein 231 OS=Xenopus tropicalis GN=tmem231 PE=2
SV=1
Length = 312
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 214 HDHPHALQFLRKDCDNVTVFVILNPVSDDDEKI---FKKWDSDYVTSSDEDEENVVDFER 270
+ HP L++ C T+F+++ + + F+ + TS+ E++ N V F+
Sbjct: 7 YSHPALLRYRSSICSKATLFILIVLLLTYIPPLLVAFRSYGFWLKTSTYEEQPN-VRFQY 65
Query: 271 DINLIKSGQGSSNTLIYQNIVGLNADLSGPKL-IPELLAQDKDDEETGE 318
D+ LI + N L + G N +L G KL +P + A+++D + G+
Sbjct: 66 DVLLIALSSTTGNYLAWSTYPGFN-NLVGDKLRLPHISAREEDRNQDGK 113
>sp|Q7T316|TM231_DANRE Transmembrane protein 231 OS=Danio rerio GN=tmem231 PE=2 SV=2
Length = 309
Score = 36.2 bits (82), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 214 HDHPHALQFLRKDCDNVTVFV--ILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERD 271
+ HP +++ C T+FV +L + + ++ + +E+ VV F+ D
Sbjct: 7 YAHPALIRYRTCVCTRATLFVCVVLGLTYISPLLVAYRSQGFWLKRNSYEEQPVVKFQYD 66
Query: 272 INLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKDDEETGES 319
+ L+ + N L + N + IPE+ AQ++D + G+S
Sbjct: 67 LILLGVTDTTGNYLAWSTFPNFNRLIGDNLRIPEISAQEEDKNQDGKS 114
>sp|A7HMK2|RIMO_FERNB Ribosomal protein S12 methylthiotransferase RimO
OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM
5306 / Rt17-B1) GN=rimO PE=3 SV=1
Length = 431
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 17/101 (16%)
Query: 212 VEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERD 271
V+ D P+A + CD F + K+ +V+ ED E V +
Sbjct: 135 VDSDLPYAYVKIADGCDRACTFCTI-----------PKFKGGFVSRKLEDIEKEVRY--- 180
Query: 272 INLIKSGQGSSNTLIYQNIVGLNADLSGPKLIPELLAQDKD 312
LI++G+ L+ Q+ G DL G +++PELL + D
Sbjct: 181 --LIENGK-KEIVLVAQDTTGYGVDLYGKQMLPELLKRIND 218
>sp|O13935|TRM4B_SCHPO Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=trm4b PE=3 SV=2
Length = 685
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 71 FAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLT--RMYSEGL 128
FA +FK I +R K+V+G RF + K+ ++++ ++ K +++ R++S G+
Sbjct: 527 FACSLFKEIIEANTNRVKFVHGGVRF---FVKQEISQLLKDFSLKANKDICNFRIHSNGV 583
Query: 129 NVPKPILLKSH 139
N+ P L + H
Sbjct: 584 NIISPFLNEKH 594
>sp|A2SR70|KAE1B_METLZ Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis
protein OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=Mlab_0653 PE=3 SV=1
Length = 525
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 182 NKCHLVHADLSEYNMLVHKATLFIID--VAQSVEHDHPHALQFLRKDCDNVTVFVILNPV 239
+K + H DL+ NM+ H +++ID ++Q E P + D +F L
Sbjct: 434 HKAGITHGDLTTSNMIWHNDRVYLIDFGLSQMTEEIEP-------RGVDLHVLFQTLEST 486
Query: 240 SDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINL 274
+++ E + + + Y + E ENV+ E +I L
Sbjct: 487 TENPETLKSAFINGYCAAFSE-AENVIRREHEIEL 520
>sp|Q55FV5|Y8550_DICDI Probable serine/threonine-protein kinase DDB_G0268550
OS=Dictyostelium discoideum GN=DDB_G0268550 PE=3 SV=1
Length = 536
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 141 LLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLV 198
+ + FI K K PL E + ++C+ M L+N C+L+H DL N+++
Sbjct: 98 IYLEFIEGKTIYELKKKKFPLNEKQISIILKKCLETMKFLHNNCNLIHMDLKCDNIIL 155
>sp|Q55CZ1|GDT2_DICDI Probable serine/threonine-protein kinase gdt2 OS=Dictyostelium
discoideum GN=gdt2 PE=2 SV=1
Length = 1637
Score = 32.7 bits (73), Expect = 4.2, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 236 LNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSG-------------QGSS 282
+ P+ +++E F+ + +Y SSD E N D E IN+I+ G Q
Sbjct: 1021 IKPIINNNEPFFEDYSDEYDDSSDGAELNEDDVEDYINIIRGGNIKIEAEGELFVRQFER 1080
Query: 283 NTLIYQNIVGLNADLSGPKLIPELLAQD 310
NT + + + P L+P L D
Sbjct: 1081 NTFDQEFFEYKKSKIPSPHLVPSLAHGD 1108
>sp|Q8TGH6|GDA1_CANAL Guanosine-diphosphatase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=GDA1 PE=3 SV=1
Length = 599
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 84 KDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHV 140
K+ D YV F + Y + NP M +++ +E+++L+++ +G K ILL HV
Sbjct: 479 KNSDMYV-----FSYFYDRTNPIGMPSSFSVEELKDLSKLVCQGETFWKDILLDDHV 530
>sp|Q9UUA4|SEC66_SCHPO Translocation protein sec66 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec66 PE=1 SV=1
Length = 192
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/100 (17%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 180 LYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVT----VFVI 235
L N+ + + ++ L + L ++D+A++ P QF+ + C+ + + I
Sbjct: 93 LLNRGGVGDELIRKFGRLEKETELELMDIAKTANSLQPGWNQFIFQTCNEIIENEKIHSI 152
Query: 236 LNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLI 275
++ + D + I ++W ++ + DEE + ++++ ++
Sbjct: 153 IDNIPKDIDSISQRWQTEKILYEAADEELRIQAQKELGVL 192
>sp|A8MK48|MURC_ALKOO UDP-N-acetylmuramate--L-alanine ligase OS=Alkaliphilus oremlandii
(strain OhILAs) GN=murC PE=3 SV=1
Length = 465
Score = 31.6 bits (70), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 29/202 (14%)
Query: 103 KNPRKMVRTWAEKEMRNLTRMYSEGLNVPK-------PILLKSHVLLMTFIGEDGWPAAK 155
K+P +V T A KE N RM ++ N+P+ I++K++ + G G K
Sbjct: 69 KDPDLVVYTAAIKE-HNPERMAAKERNIPQIDRAEMLGIIMKNYKKAIAVSGSHG----K 123
Query: 156 LKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEY--NMLVHKATLFIIDVAQSVE 213
T L ++M + + +V +L E N+ + + FI + + VE
Sbjct: 124 TTTTSLI----------SLIMEYSNLDPTIMVGGELDEIGGNIKIGNSEHFITEACEYVE 173
Query: 214 HD---HPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFER 270
+P L D D++ F LN + + K + ++ D+ NV +
Sbjct: 174 SFLKFYPFIGIILNIDEDHLDYFKDLNHIKEAFRKFINLIPQEGFLIANGDDANVQEILH 233
Query: 271 DI--NLIKSGQGSSNTLIYQNI 290
I NLI G SSNT + +NI
Sbjct: 234 SIECNLITYGLDSSNTFVARNI 255
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,121,693
Number of Sequences: 539616
Number of extensions: 5775671
Number of successful extensions: 27100
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 25676
Number of HSP's gapped (non-prelim): 1136
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)