RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10135
(351 letters)
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal
domain {Archaeoglobus fulgidus [TaxId: 2234]}
Length = 191
Score = 88.7 bits (219), Expect = 2e-21
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 29/199 (14%)
Query: 36 VSEVNGCISTGKEANVYHASPGANYKIENLELEKEFAIKIFKTSILVFKD-RDKYVNGEF 94
V + + GKE+ V++ E E +K K FK ++K G+
Sbjct: 1 VDAIGKLMGEGKESAVFNCY---------SEKFGECVVKFHKVGHTSFKKVKEKRDYGDL 51
Query: 95 RFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAA 154
F + A E R L ++ GL VPK + + +LM I
Sbjct: 52 HFS---------VLAIRSARNEFRALQKLQ--GLAVPKVYAWEGNAVLMELIDAKEL--- 97
Query: 155 KLKDTPLTESGACKLYRECVVMMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEH 214
+ ++ + + + Y+ +VH DLS+YN+LV + ++IID QSVE
Sbjct: 98 ----YRVRVENPDEVLDMILEEVAKFYH-RGIVHGDLSQYNVLVSEEGIWIIDFPQSVEV 152
Query: 215 DHPHALQFLRKDCDNVTVF 233
+ L +D N+ +
Sbjct: 153 GEEGWREILERDVRNIITY 171
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein
kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 31.1 bits (70), Expect = 0.17
Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 23/160 (14%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
L +E+AIKI + ++ +++ YV E K+ T+ + E
Sbjct: 25 VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLY 84
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
Y++ L+ +I + G E+ E V +
Sbjct: 85 FGLSYAKNGE------------LLKYIRKIG---------SFDETCTRFYTAEIVSALEY 123
Query: 180 LYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHDHPH 218
L+ K ++H DL N+L+ + I D +
Sbjct: 124 LHGKG-IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 162
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 362
Score = 30.0 bits (66), Expect = 0.41
Identities = 14/141 (9%), Positives = 47/141 (33%), Gaps = 9/141 (6%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+ +++ A+KI + + + + + R + K A ++
Sbjct: 30 WLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND----ADNTKEDSMGANHILKL 85
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
L P + ++ K + + ++ ++ ++ +
Sbjct: 86 LDHFN-----HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDY 140
Query: 180 LYNKCHLVHADLSEYNMLVHK 200
++ +C ++H D+ N+L+
Sbjct: 141 MHRRCGIIHTDIKPENVLMEI 161
>d1c8na_ b.121.4.7 (A:) Necrovirus coat protein {TNV (Tobacco
necrosis virus) [TaxId: 12054]}
Length = 189
Score = 29.1 bits (65), Expect = 0.50
Identities = 8/79 (10%), Positives = 22/79 (27%), Gaps = 1/79 (1%)
Query: 222 FLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFERDINLIKSGQGS 281
L D + + V+ D+ + + + ++N +++ G +
Sbjct: 106 ILNTDVTPTSAIYVDVDVTRFDKAWYSTIGTAAFAALTAFDQNQFCPCT-VHIGSDGGPA 164
Query: 282 SNTLIYQNIVGLNADLSGP 300
+L P
Sbjct: 165 VAVPPGDIFFKYVIELIEP 183
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic
domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 277
Score = 29.3 bits (65), Expect = 0.58
Identities = 14/147 (9%), Positives = 44/147 (29%), Gaps = 18/147 (12%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+ +L L ++ A+K+ + + E + A
Sbjct: 24 HLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE---------------AQNAAALNHPA 68
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ +Y + ++M ++ + P+T A ++ + +
Sbjct: 69 IVAVY--DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 126
Query: 180 LYNKCHLVHADLSEYNMLVHKATLFII 206
+ ++H D+ N+++ +
Sbjct: 127 SHQN-GIIHRDVKPANIMISATNAVKV 152
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 350
Score = 29.4 bits (65), Expect = 0.73
Identities = 19/140 (13%), Positives = 45/140 (32%), Gaps = 22/140 (15%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+++ E +A+KI +V + ++ E R K+ ++ +
Sbjct: 58 MLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ Y + + + + G +E A + V+
Sbjct: 118 MVMEY------------VAGGEMFSHLRRIG---------RFSEPHARFYAAQIVLTFEY 156
Query: 180 LYNKCHLVHADLSEYNMLVH 199
L+ L++ DL N+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLID 175
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 337
Score = 29.0 bits (64), Expect = 0.76
Identities = 18/141 (12%), Positives = 43/141 (30%), Gaps = 22/141 (15%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+ + +A+KI + +++ KD + E R + + +
Sbjct: 22 ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
Y+ G + + ++ TE A E +V
Sbjct: 82 FVMEYANGGELFFHL---------------------SRERVFTEERARFYGAE-IVSALE 119
Query: 180 LYNKCHLVHADLSEYNMLVHK 200
+ +V+ D+ N+++ K
Sbjct: 120 YLHSRDVVYRDIKLENLMLDK 140
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 28.9 bits (64), Expect = 0.90
Identities = 17/149 (11%), Positives = 43/149 (28%), Gaps = 24/149 (16%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+K+ + A K+ + + + + ++ E
Sbjct: 23 FKVSHKPSGLVMARKLIH------LEIKPAIRNQII-----------RELQVLHECNSPY 65
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ Y + + + M + K + E K+ + +
Sbjct: 66 IVGFYGAFYSDGEISIC------MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTY 119
Query: 180 LYNKCHLVHADLSEYNMLV-HKATLFIID 207
L K ++H D+ N+LV + + + D
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCD 148
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein
kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 28.1 bits (62), Expect = 1.3
Identities = 24/170 (14%), Positives = 49/170 (28%), Gaps = 28/170 (16%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
Y + AIK + T E+
Sbjct: 21 YSGIRVSDNLPVAIKHVEKD--------------------RISDWGELPNGTRVPMEVVL 60
Query: 120 LTRMYSEGLNVPKPILL----KSHVLLMTFIGEDGWPAAKLKD-TPLTESGACKLYRECV 174
L ++ S V + + S VL++ + + L E A + + +
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120
Query: 175 VMMWRLYNKCHLVHADLSEYNMLV--HKATLFIIDVAQSVEHDHPHALQF 222
+ +N ++H D+ + N+L+ ++ L +ID F
Sbjct: 121 EAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF 169
>d1vsra_ c.52.1.15 (A:) Very short patch repair (VSR) endonuclease
{Escherichia coli [TaxId: 562]}
Length = 134
Score = 27.2 bits (60), Expect = 1.5
Identities = 12/54 (22%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Query: 81 LVFKDRDK--YVNGEFRFRHGYCK-KNPRKMVRTWAEKEMRN--LTRMYSEGLN 129
V + + +G F H K P W EK +N R L
Sbjct: 30 FVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDISRLQ 83
>d1ikna2 b.2.5.3 (A:19-191) p65 subunit of NF-kappa B (NFKB),
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 173
Score = 27.9 bits (62), Expect = 1.5
Identities = 16/90 (17%), Positives = 25/90 (27%), Gaps = 2/90 (2%)
Query: 204 FIIDVAQSVEHDHPHALQFLRKDCDNVTVFVILNPVSDDDEKIFKKWDSDYVTSSDEDEE 263
I + PH + + KDC + L P D F+ V D ++
Sbjct: 54 VRISLVTKDPPHRPHPHELVGKDCRDGYYEADLCP--DRSIHSFQNLGIQCVKKRDLEQA 111
Query: 264 NVVDFERDINLIKSGQGSSNTLIYQNIVGL 293
+ + N N V L
Sbjct: 112 ISQRIQTNNNPFHVPIEEQRGDYDLNAVRL 141
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
{Cow (Bos taurus) [TaxId: 9913]}
Length = 364
Score = 28.2 bits (62), Expect = 1.5
Identities = 21/139 (15%), Positives = 41/139 (29%), Gaps = 19/139 (13%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
Y + K +A+K K R K GE N R M+ + +
Sbjct: 21 YGCRKADTGKMYAMKCLD------KKRIKMKQGETLAL------NERIMLSLVSTGDCPF 68
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ M + + + G L + + Y +++
Sbjct: 69 IVCMSYAFHT-------PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 121
Query: 180 LYNKCHLVHADLSEYNMLV 198
+ +V+ DL N+L+
Sbjct: 122 HMHNRFVVYRDLKPANILL 140
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 321
Score = 28.1 bits (62), Expect = 1.8
Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 28/162 (17%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
++ +K + K K V E + +N + ++ E
Sbjct: 22 HRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELV 77
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ + GL+ + I + L E + +
Sbjct: 78 MIFEFISGLD------------IFERINTSAF--------ELNEREIVSYVHQVCEALQF 117
Query: 180 LYNKCHLVHADLSEYNMLVHK---ATLFIIDVAQSVEHDHPH 218
L+ ++ H D+ N++ +T+ II+ Q+ +
Sbjct: 118 LH-SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 316
Score = 27.8 bits (61), Expect = 2.2
Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 23/160 (14%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+ I + + +A+K+ K I+V + ++ N E +M T+ + +
Sbjct: 21 HLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 80
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ Y EG L +P + K Y V +
Sbjct: 81 MIMDYIEG-----------GELFSLLRKSQRFP-----------NPVAKFYAAEVCLALE 118
Query: 180 LYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHDHPH 218
+ +++ DL N+L+ + I D +
Sbjct: 119 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT 158
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 320
Score = 27.4 bits (60), Expect = 2.6
Identities = 31/161 (19%), Positives = 51/161 (31%), Gaps = 24/161 (14%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCK-KNPRKMVRTWAEKEMR 118
+ E + + FAIK K +++ D + E R + M T+ KE
Sbjct: 19 FLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 78
Query: 119 NLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMW 178
Y G + LM I S A E ++ +
Sbjct: 79 FFVMEYLNGGD------------LMYHIQSCH---------KFDLSRATFYAAEIILGLQ 117
Query: 179 RLYNKCHLVHADLSEYNMLVHK-ATLFIIDVAQSVEHDHPH 218
L+ +V+ DL N+L+ K + I D E+
Sbjct: 118 FLH-SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 157
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 263
Score = 27.2 bits (60), Expect = 2.7
Identities = 22/167 (13%), Positives = 46/167 (27%), Gaps = 29/167 (17%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
Y + + A+K+ + L + + E V + N
Sbjct: 23 YLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE---------------VEIQSHLRHPN 67
Query: 120 LTRMYSEGLNVPKPILLKSHV---LLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVM 176
+ R+Y + + L+ + + + + E E
Sbjct: 68 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---------KFDEQRTATYITELANA 118
Query: 177 MWRLYNKCHLVHADLSEYN-MLVHKATLFIIDVAQSVEHDHPHALQF 222
+ ++K ++H D+ N +L L I D SV
Sbjct: 119 LSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 27.1 bits (59), Expect = 3.4
Identities = 28/147 (19%), Positives = 45/147 (30%), Gaps = 30/147 (20%)
Query: 69 KEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRNLTRMYSEGL 128
+E A+KIF + R+ + RH N+ +
Sbjct: 27 EEVAVKIFSSREERSWFREAEIYQTVMLRH-------------------ENILGFIAADN 67
Query: 129 NVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWRLYNKC---- 184
K + + L++ E G L +T G KL + L+ +
Sbjct: 68 ---KDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 185 ---HLVHADLSEYNMLV-HKATLFIID 207
+ H DL N+LV T I D
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIAD 151
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9
{Human (Homo sapiens) [TaxId: 9606]}
Length = 318
Score = 27.2 bits (59), Expect = 3.6
Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 16/149 (10%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
+K + + ++ A+K + E + +N ++ K
Sbjct: 27 FKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNLIEICRTKA--- 82
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
P S L+ F D T S ++ + + ++
Sbjct: 83 ----------SPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 132
Query: 180 LYNKCHLVHADLSEYNMLVHK-ATLFIID 207
++ + ++H D+ N+L+ + L + D
Sbjct: 133 IH-RNKILHRDMKAANVLITRDGVLKLAD 160
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase
kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId:
9986]}
Length = 277
Score = 26.6 bits (58), Expect = 4.2
Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 24/197 (12%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAE-KEMR 118
+ + KE+A+KI + ++ K V +
Sbjct: 20 RRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT---------LKEVDILRKVSGHP 70
Query: 119 NLTRMYSEGLNVPKPIL---LKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVV 175
N+ ++ L L L ++ E L+E K+ R +
Sbjct: 71 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV---------TLSEKETRKIMRALLE 121
Query: 176 MMWRLYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFV 234
++ L+ ++VH DL N+L+ + + D S + D L+ + + +
Sbjct: 122 VICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 180
Query: 235 ILNPVSDDDEKIFKKWD 251
I ++D+ K+ D
Sbjct: 181 IECSMNDNHPGYGKEVD 197
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 309
Score = 26.5 bits (58), Expect = 4.8
Identities = 21/153 (13%), Positives = 47/153 (30%), Gaps = 31/153 (20%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEF----RFRHGYCKKNPRKMVRTWAEK 115
Y ++ + AIK S ++ + + E + RH
Sbjct: 32 YFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH----------------- 74
Query: 116 EMRNLTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVV 175
N + L L+M + ++ PL E + +
Sbjct: 75 --PNTIQYRGCYLREHTAW------LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 126
Query: 176 MMWRLYNKCHLVHADLSEYNMLV-HKATLFIID 207
+ L++ +++H D+ N+L+ + + D
Sbjct: 127 GLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGD 158
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 26.5 bits (58), Expect = 5.3
Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 25/169 (14%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
N E+ A+KI R C +N +K + N
Sbjct: 22 QLAVNRVTEEAVAVKIVDMK-----------------RAVDCPENIKKEICINKMLNHEN 64
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ + Y L + + D + E A + + + + +
Sbjct: 65 VVKFYGHRREGNIQY------LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 180 LYNKCHLVHADLSEYNMLV-HKATLFIIDVAQSVEHDHPHALQFLRKDC 227
L+ + H D+ N+L+ + L I D + + + + L K C
Sbjct: 119 LHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human
(Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 26.3 bits (57), Expect = 5.7
Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 24/168 (14%)
Query: 60 YKIENLELEKEFAIKIFKTSILVFKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
K ++A K K R G +++ + V E + N
Sbjct: 27 KKCREKSTGLQYAAKFIKKRRTKSSRR------------GVSREDIEREVSILKEIQHPN 74
Query: 120 LTRMYSEGLNVPKPILLKSHVLLMTFIGEDGWPAAKLKDTPLTESGACKLYRECVVMMWR 179
+ ++ N I L++ + + LTE A + ++ + ++
Sbjct: 75 VITLHEVYENKTDVI------LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 180 LYNKCHLVHADLSEYNMLV-----HKATLFIIDVAQSVEHDHPHALQF 222
+ + H DL N+++ K + IID + + D + +
Sbjct: 129 -LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans
[TaxId: 6239]}
Length = 395
Score = 26.3 bits (57), Expect = 6.4
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 8/101 (7%)
Query: 176 MMWRLYNKCHLVHADLSEYNMLVHKATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVFVI 235
+ + H DL E N+L+ KA+ I + + + + + +I
Sbjct: 210 HISLSKSPVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLI 269
Query: 236 ------LNPVSDDDEKIFKKWDSDYVTSSDEDEENVVDFER 270
N + D F +W DY DE + E
Sbjct: 270 DFEYASYNYRAFDFANHFIEWTIDY--DIDEAPFYKIQTEN 308
>d1odha_ d.239.1.1 (A:) Mgcm1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 158
Score = 25.6 bits (56), Expect = 7.0
Identities = 6/37 (16%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 83 FKDRDKYVNGEFRFRHGYCKKNPRKMVRTWAEKEMRN 119
++ + + + +N ++ + +WA MRN
Sbjct: 17 TDWFQEWPDSYVKHIYSSDDRNAQRHLSSWA---MRN 50
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal
domain {Staphylococcus aureus [TaxId: 1280]}
Length = 80
Score = 24.3 bits (53), Expect = 8.6
Identities = 4/33 (12%), Positives = 9/33 (27%)
Query: 201 ATLFIIDVAQSVEHDHPHALQFLRKDCDNVTVF 233
F + ++ D + L V +
Sbjct: 44 MYRFFVQADSAITTDIKKVIAILETLDFKVEMI 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.133 0.389
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,285,507
Number of extensions: 60479
Number of successful extensions: 269
Number of sequences better than 10.0: 1
Number of HSP's gapped: 262
Number of HSP's successfully gapped: 40
Length of query: 351
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 265
Effective length of database: 1,226,816
Effective search space: 325106240
Effective search space used: 325106240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.9 bits)