Query psy10137
Match_columns 625
No_of_seqs 546 out of 3201
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 18:47:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cxl_A N-chimerin; SH2, RHO-GA 100.0 5.1E-50 1.8E-54 440.3 15.7 253 69-326 206-463 (463)
2 3byi_A RHO GTPase activating p 100.0 3.5E-41 1.2E-45 333.2 14.0 195 134-329 16-214 (214)
3 2osa_A N-chimaerin; RHO-GAP, G 100.0 2.6E-41 9E-46 331.1 12.7 193 134-326 5-202 (202)
4 2ee4_A RHO GTPase activating p 100.0 2.2E-41 7.4E-46 333.4 10.8 197 132-329 7-205 (209)
5 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 6E-41 2E-45 334.9 11.7 203 130-333 14-226 (229)
6 3fk2_A Glucocorticoid receptor 100.0 2.5E-40 8.6E-45 333.5 16.2 194 134-328 50-245 (246)
7 1tx4_A P50-rhogap; complex (GT 100.0 1.5E-40 5.1E-45 324.7 13.4 189 134-326 5-198 (198)
8 3msx_B RHO GTPase-activating p 100.0 3.6E-40 1.2E-44 322.9 14.9 191 133-326 8-201 (201)
9 1ow3_A RHO-GTPase-activating p 100.0 1.2E-39 4.1E-44 327.7 13.5 193 133-329 40-237 (242)
10 1f7c_A Rhogap protein; GTPase 100.0 2.9E-39 9.9E-44 322.8 13.2 195 135-330 16-220 (231)
11 2ovj_A Mgcracgap, RAC GTPase-a 100.0 2.4E-38 8.3E-43 309.6 17.9 189 140-330 4-198 (201)
12 1pbw_A Rhogap domain, phosphat 100.0 2.6E-39 8.8E-44 320.0 9.3 189 135-329 5-201 (216)
13 3kuq_A RHO GTPase-activating p 100.0 2.2E-38 7.4E-43 315.9 11.9 169 129-298 12-183 (228)
14 3eap_A RHO GTPase-activating p 100.0 2.4E-37 8.3E-42 315.7 13.0 191 132-326 59-257 (271)
15 2xs6_A Phosphatidylinositol 3- 100.0 9.6E-38 3.3E-42 307.0 3.3 180 134-328 19-211 (214)
16 3qis_A Inositol polyphosphate 100.0 6.3E-32 2.1E-36 287.1 12.5 141 151-298 198-338 (366)
17 2ee4_A RHO GTPase activating p 100.0 2.4E-30 8.2E-35 254.6 11.5 160 373-532 41-207 (209)
18 3byi_A RHO GTPase activating p 100.0 5.7E-30 2E-34 252.8 11.6 135 373-507 49-186 (214)
19 3msx_B RHO GTPase-activating p 100.0 2.1E-29 7.2E-34 246.4 12.4 133 373-507 40-174 (201)
20 2osa_A N-chimaerin; RHO-GAP, G 100.0 1.8E-29 6.1E-34 247.0 10.7 135 373-507 38-176 (202)
21 3fk2_A Glucocorticoid receptor 100.0 3E-29 1E-33 252.6 12.5 136 373-508 82-219 (246)
22 3kuq_A RHO GTPase-activating p 100.0 1.3E-29 4.5E-34 252.4 9.7 137 373-510 50-188 (228)
23 1tx4_A P50-rhogap; complex (GT 100.0 1.8E-29 6E-34 246.3 9.7 131 373-505 40-172 (198)
24 1pbw_A Rhogap domain, phosphat 100.0 3.8E-29 1.3E-33 247.1 11.2 133 373-507 39-176 (216)
25 1f7c_A Rhogap protein; GTPase 100.0 7.8E-29 2.7E-33 247.3 13.0 157 373-529 51-218 (231)
26 2ovj_A Mgcracgap, RAC GTPase-a 100.0 5.9E-29 2E-33 243.0 11.8 133 373-507 31-166 (201)
27 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 9.6E-29 3.3E-33 246.5 12.4 157 373-530 51-222 (229)
28 1ow3_A RHO-GTPase-activating p 100.0 1.4E-28 4.7E-33 247.2 10.7 131 373-505 76-208 (242)
29 3eap_A RHO GTPase-activating p 99.9 2.2E-27 7.4E-32 242.2 11.7 131 374-507 97-228 (271)
30 3cxl_A N-chimerin; SH2, RHO-GA 99.9 5.4E-26 1.9E-30 249.4 12.0 136 373-508 299-438 (463)
31 3qis_A Inositol polyphosphate 99.9 4.5E-26 1.6E-30 242.0 11.0 128 373-507 213-340 (366)
32 2xs6_A Phosphatidylinositol 3- 99.9 7E-27 2.4E-31 229.7 3.0 122 373-507 54-177 (214)
33 2enn_A NPKC-theta, protein kin 99.4 6E-14 2E-18 114.5 2.9 60 66-125 17-76 (77)
34 2yuu_A NPKC-delta, protein kin 99.4 2.2E-13 7.6E-18 112.9 4.5 60 67-126 12-71 (83)
35 2enz_A NPKC-theta, protein kin 99.3 8.3E-13 2.8E-17 104.2 3.6 56 69-124 9-64 (65)
36 2row_A RHO-associated protein 99.3 5.4E-13 1.9E-17 109.4 1.3 58 67-124 19-81 (84)
37 3uej_A NPKC-delta, protein kin 99.3 5.5E-13 1.9E-17 105.2 1.3 59 68-126 5-63 (65)
38 2db6_A SH3 and cysteine rich d 99.3 1.2E-12 4.2E-17 105.8 2.7 58 68-125 13-71 (74)
39 1y8f_A UNC-13 homolog A, MUNC1 99.3 1.2E-12 4.1E-17 103.5 2.6 56 69-124 10-65 (66)
40 2eli_A Protein kinase C alpha 99.3 3.4E-12 1.2E-16 106.1 4.7 59 68-126 13-71 (85)
41 1ptq_A Protein kinase C delta 99.2 1.8E-12 6.2E-17 96.7 2.2 50 73-122 1-50 (50)
42 1rfh_A RAS association (ralgds 99.2 4.3E-12 1.5E-16 97.8 1.6 52 69-123 7-59 (59)
43 2fnf_X Putative RAS effector N 99.2 1E-11 3.5E-16 99.6 3.7 51 70-123 21-72 (72)
44 1faq_A RAF-1; transferase, ser 99.2 9.1E-12 3.1E-16 93.6 2.9 51 70-124 1-51 (52)
45 4b6d_A RAC GTPase-activating p 99.1 3.2E-11 1.1E-15 93.1 3.3 56 69-125 5-60 (61)
46 3pfq_A PKC-B, PKC-beta, protei 98.8 8.3E-10 2.8E-14 126.6 0.0 59 67-125 32-90 (674)
47 1kbe_A Kinase suppressor of RA 98.7 2.9E-09 1E-13 78.0 2.5 45 71-120 3-47 (49)
48 3ky9_A Proto-oncogene VAV; cal 98.5 4.9E-08 1.7E-12 110.0 3.1 57 69-126 515-571 (587)
49 2vrw_B P95VAV, VAV1, proto-onc 98.3 1.5E-07 5.2E-12 101.1 3.4 57 69-126 343-399 (406)
50 3pfq_A PKC-B, PKC-beta, protei 97.8 6.5E-06 2.2E-10 94.2 3.8 56 70-125 100-155 (674)
51 1r79_A Diacylglycerol kinase, 96.1 0.0026 9E-08 51.9 2.5 57 69-125 24-81 (84)
52 1v5n_A PDI-like hypothetical p 72.8 1.6 5.3E-05 35.8 2.0 43 72-118 37-79 (89)
53 3nw0_A Non-structural maintena 42.5 7.5 0.00026 37.8 1.1 33 82-118 179-211 (238)
54 2ct0_A Non-SMC element 1 homol 33.9 13 0.00044 29.1 1.0 35 80-118 12-46 (74)
55 2csz_A Synaptotagmin-like prot 32.1 18 0.00063 28.4 1.6 34 84-117 26-59 (76)
56 1wil_A KIAA1045 protein; ring 27.3 17 0.00059 29.1 0.7 33 83-118 15-47 (89)
57 2zet_C Melanophilin; complex, 27.2 26 0.00091 31.5 2.0 35 82-116 67-101 (153)
58 1zbd_B Rabphilin-3A; G protein 24.7 30 0.001 30.4 1.8 37 82-118 54-90 (134)
59 2gmg_A Hypothetical protein PF 23.2 38 0.0013 28.3 2.1 30 79-108 63-92 (105)
60 1ccd_A Clara cell 17 KD protei 21.7 1.6E+02 0.0054 23.0 5.4 45 225-272 19-66 (77)
61 3l32_A Phosphoprotein; antipar 20.1 34 0.0012 23.7 0.9 9 22-30 4-12 (45)
No 1
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=100.00 E-value=5.1e-50 Score=440.25 Aligned_cols=253 Identities=30% Similarity=0.566 Sum_probs=228.9
Q ss_pred ccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccccCCcccccceeecccccccccC
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLARSSAARSHGHRVFGVPLSQLSSS 148 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~~~~~~~~~~~~FG~~L~~l~~~ 148 (625)
..++|.|..+++..||+|++|++++||.++||++|.+|++.||++|...++..|+... ....++||++|+.++..
T Consensus 206 iv~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~~vp~~C~~~~-----~~~~~vFG~~L~~~~~~ 280 (463)
T 3cxl_A 206 YEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSKMVPNDCKPDL-----KHVKKVYSCDLTTLVKA 280 (463)
T ss_dssp -CBCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHTTSCSBCCGGG-----GGCCCCTTSCHHHHHHH
T ss_pred cCCCcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCccccccccccccccccccc-----cccccccccccchhhhc
Confidence 4678999999999999999999998888899999999999999999999999997653 23467999999998875
Q ss_pred -CCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcC-CCCCCCcc-CcChHHHHHHHHHHHHhCCCCCCC
Q psy10137 149 -DGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEG-KLPELELE-VYSVHILANLLKLFLREMPEPLLT 225 (625)
Q Consensus 149 -~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g-~~~~~~~~-~~d~~~va~~lK~fLr~Lp~pLl~ 225 (625)
...||.+|..|+++|+++|+.+|||||++|+.+.+++|++.||++ +..++... ..|+|+||++||.|||+||+||+|
T Consensus 281 ~~~~vP~iv~~~i~~le~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~dv~~va~lLK~flReLPePLi~ 360 (463)
T 3cxl_A 281 HTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLIT 360 (463)
T ss_dssp HTCSSCHHHHHHHHHHHHHCSCSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHHHHHHHHHHCSSCSSC
T ss_pred cCCCCCeeHHHHHHHHHhcCCCCCceeEecCCHHHHHHHHHHHHhcCCcCCcccccCCCcchhhhHHHHHHHhcCCCCCC
Confidence 448999999999999999999999999999999999999999984 22333322 249999999999999999999999
Q ss_pred hhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhccccccccCCCCchh
Q psy10137 226 FEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAPCILRQRHFPAQD 303 (625)
Q Consensus 226 ~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf~P~Llr~~~~~~~~ 303 (625)
+++|+.|+++++..+ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||+.|||+||||+|++++..+...
T Consensus 361 ~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~~~~ 440 (463)
T 3cxl_A 361 YDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDAMA 440 (463)
T ss_dssp TTTHHHHHHHHHCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCCCSCTTG
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHhhccccCCCCccHHH
Confidence 999999999998654 789999999999999999999999999999999999999999999999999999997666667
Q ss_pred hHHhhHHHHHHHHHHHHhhHHHh
Q psy10137 304 ALSDISRQTLCIELIISEQLKKL 326 (625)
Q Consensus 304 ~~~~~~~~~~~ve~lI~~~~~if 326 (625)
.+.++..+..+|++||+|+..||
T Consensus 441 ~~~~~~~~~~vve~LI~~~~~iF 463 (463)
T 3cxl_A 441 ALNDIRYQRLVVELLIKNEDILF 463 (463)
T ss_dssp GGGGHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHHHHHHHHHHHHhchhhcC
Confidence 78899999999999999998887
No 2
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=333.18 Aligned_cols=195 Identities=31% Similarity=0.554 Sum_probs=173.7
Q ss_pred cceeecccccccccC-CCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccC-cChHHHHHH
Q psy10137 134 GHRVFGVPLSQLSSS-DGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEV-YSVHILANL 211 (625)
Q Consensus 134 ~~~~FG~~L~~l~~~-~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~-~d~~~va~~ 211 (625)
..++||++|..++.. +..||.++.+|+.+|+++|+++|||||++|+..++++|++.+++|....++... .|+|+||++
T Consensus 16 ~~~vFG~~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~dvh~va~l 95 (214)
T 3byi_A 16 KDQIFGSHLHKVCERENSTVPWFVKQCIEAVEKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDIHVVTGA 95 (214)
T ss_dssp CCCSTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGCSHHHHHHH
T ss_pred cCCccCCcHHHHHHHcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCCCcccccchHHHHHH
Confidence 457999999998874 448999999999999999999999999999999999999999998543333223 399999999
Q ss_pred HHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhc
Q psy10137 212 LKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVF 289 (625)
Q Consensus 212 lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf 289 (625)
||.|||+||+||+|+++|+.|+.+.+..+ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+||
T Consensus 96 LK~flreLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~NLa~vf 175 (214)
T 3byi_A 96 LKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVF 175 (214)
T ss_dssp HHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHHHhHHHh
Confidence 99999999999999999999999998655 7899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhhh
Q psy10137 290 APCILRQRHFPAQDALSDISRQTLCIELIISEQLKKLADA 329 (625)
Q Consensus 290 ~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d~ 329 (625)
||+|+|++.... ....++..+..+|++||+|+.+||+++
T Consensus 176 ~P~Ll~~~~~~~-~~~~~~~~~~~vve~LI~~~~~iF~~d 214 (214)
T 3byi_A 176 GPTLLRAENETG-NMAIHMVYQNQIAELMLSEYSKIFGSE 214 (214)
T ss_dssp HHHHHCCTTSSS-CHHHHHHHHHHHHHHHHHTHHHHHC--
T ss_pred ccccCCCCCccH-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999865432 234577889999999999999999875
No 3
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=331.08 Aligned_cols=193 Identities=33% Similarity=0.612 Sum_probs=173.9
Q ss_pred cceeecccccccccCC-CCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcC-CCCCCCccC-cChHHHHH
Q psy10137 134 GHRVFGVPLSQLSSSD-GKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEG-KLPELELEV-YSVHILAN 210 (625)
Q Consensus 134 ~~~~FG~~L~~l~~~~-~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g-~~~~~~~~~-~d~~~va~ 210 (625)
..++||++|+.++..+ ..||.++.+|+++|+++|+.+|||||++|+..++++|++.|++| ...++.... .|+|+||+
T Consensus 5 ~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~d~~~~~~~d~~~va~ 84 (202)
T 2osa_A 5 VKKVYSCDLTTLVKAHTTKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITG 84 (202)
T ss_dssp --CCTTSCHHHHHHHHTCSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHH
T ss_pred CCCccCCChHHHHHHcCCCCCcHHHHHHHHHHHhCCCcCCeeeecCcHHHHHHHHHHHHcCCCccCCCccccccHHHHHH
Confidence 3569999999988754 48999999999999999999999999999999999999999984 323333222 59999999
Q ss_pred HHHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhh
Q psy10137 211 LLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIV 288 (625)
Q Consensus 211 ~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaiv 288 (625)
+||.|||+||+||+|+++|+.|+.+.+..+ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+|
T Consensus 85 lLK~flreLpePLl~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~NLa~v 164 (202)
T 2osa_A 85 ALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIV 164 (202)
T ss_dssp HHHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHH
T ss_pred HHHHHHHhCCCccCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHH
Confidence 999999999999999999999999988754 789999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHh
Q psy10137 289 FAPCILRQRHFPAQDALSDISRQTLCIELIISEQLKKL 326 (625)
Q Consensus 289 f~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if 326 (625)
|||+|+|++..+....+.++..+..+|++||+|+..||
T Consensus 165 f~P~Ll~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF 202 (202)
T 2osa_A 165 FGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF 202 (202)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HccccCCCCCccHHHHHHHHHHHHHHHHHHHHcccccC
Confidence 99999999766666678899999999999999999887
No 4
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=100.00 E-value=2.2e-41 Score=333.45 Aligned_cols=197 Identities=27% Similarity=0.476 Sum_probs=176.3
Q ss_pred cccceeecccccccccCCCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHHH
Q psy10137 132 SHGHRVFGVPLSQLSSSDGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILANL 211 (625)
Q Consensus 132 ~~~~~~FG~~L~~l~~~~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~~ 211 (625)
....++||++|.+++..+..||.++.+|+++|+++|+.+|||||++|+..++++|++.|++|...++....+|+|+||++
T Consensus 7 ~~~~~~FG~~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~~va~l 86 (209)
T 2ee4_A 7 GWESNYFGMPLQDLVTAEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGA 86 (209)
T ss_dssp SSCCSSSSSCHHHHSCSSCCSCHHHHHHHHHHHHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHHHHHHH
T ss_pred CCCCCeeCCcHHHHHhcCCCCChHHHHHHHHHHHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHH
Confidence 34567999999999987789999999999999999999999999999999999999999998533222224799999999
Q ss_pred HHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhc
Q psy10137 212 LKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVF 289 (625)
Q Consensus 212 lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf 289 (625)
||.|||+||+||+|+++|+.|+++++..+ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+||
T Consensus 87 LK~flreLPePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLaivf 166 (209)
T 2ee4_A 87 LKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICF 166 (209)
T ss_dssp HHHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHH
T ss_pred HHHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHh
Confidence 99999999999999999999999998765 8899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhhh
Q psy10137 290 APCILRQRHFPAQDALSDISRQTLCIELIISEQLKKLADA 329 (625)
Q Consensus 290 ~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d~ 329 (625)
||+|+|++..+ ...+.+...+..+|++||+|+..+|+++
T Consensus 167 ~P~L~~~~~~~-~~~l~~~~~~~~vve~LI~~~~~iF~~~ 205 (209)
T 2ee4_A 167 WPTLMRPDFEN-REFLSTTKIHQSVVETFIQQCQFFFYNG 205 (209)
T ss_dssp HHHHSCCCCCS-SCCSCCCTTHHHHHHHHHHTHHHHTTCC
T ss_pred cccccCCCCcc-HHHHHHhHHHHHHHHHHHHhhHHHcCCC
Confidence 99999986433 2345566778899999999999999754
No 5
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=334.85 Aligned_cols=203 Identities=32% Similarity=0.571 Sum_probs=166.5
Q ss_pred cccccceeecccccccccCCC-CccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccC--cChH
Q psy10137 130 ARSHGHRVFGVPLSQLSSSDG-KVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEV--YSVH 206 (625)
Q Consensus 130 ~~~~~~~~FG~~L~~l~~~~~-~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~--~d~~ 206 (625)
++..+.++||++|.+++...+ .||.+|.+|+++|+++|+ +|||||++|+..++++|++.|++|....+..+. +|+|
T Consensus 14 ~~~~~~~vFG~~L~~~~~~~~~~vP~iv~~~i~~i~~~gl-~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~~dvh 92 (229)
T 3iug_A 14 LYFQGERVFGCDLGEHLLNSGFEVPQVLQSCTAFIERYGI-VDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIH 92 (229)
T ss_dssp ----CCCSTTSCHHHHHHHHCCSSCHHHHHHHHHHHHHCC-STTTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTTTCHH
T ss_pred CCCCCCCeECcchHHHHHhcCCCCCHHHHHHHHHHHHcCC-CCCCeecCCcHHHHHHHHHHHhcCCCCCccccccccchH
Confidence 445667899999999877544 899999999999999999 799999999999999999999998654444332 4999
Q ss_pred HHHHHHHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccc
Q psy10137 207 ILANLLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNS 284 (625)
Q Consensus 207 ~va~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~n 284 (625)
+||++||.|||+||+||+|+++|+.|+.+....+ +++..++.++.+||++|+.||.||+.||++|+++++.|+||++|
T Consensus 93 ~va~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 172 (229)
T 3iug_A 93 SVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKN 172 (229)
T ss_dssp HHHHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHH
T ss_pred HHHHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCChHH
Confidence 9999999999999999999999999999988654 88999999999999999999999999999999999999999999
Q ss_pred hhhhccccccccCCCC-----chhhHHhhHHHHHHHHHHHHhhHHHhhhhHhhh
Q psy10137 285 LAIVFAPCILRQRHFP-----AQDALSDISRQTLCIELIISEQLKKLADALSDI 333 (625)
Q Consensus 285 Laivf~P~Llr~~~~~-----~~~~~~~~~~~~~~ve~lI~~~~~if~d~~~~~ 333 (625)
||+||||+|+|++... ....+.++..+..+|++||+|+..||+++....
T Consensus 173 LAivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~~~~~ 226 (229)
T 3iug_A 173 LAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRISMA 226 (229)
T ss_dssp HHHHHHHHHCCC-------------------CHHHHHHHHHTHHHHTC------
T ss_pred HHHHHhccccCCCcccccccchHHHHHHHHHHHHHHHHHHHhHHHhCCCcHHhh
Confidence 9999999999986422 234567888999999999999999999876543
No 6
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=333.49 Aligned_cols=194 Identities=29% Similarity=0.534 Sum_probs=178.1
Q ss_pred cceeecccccccccCCCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHHHHH
Q psy10137 134 GHRVFGVPLSQLSSSDGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILANLLK 213 (625)
Q Consensus 134 ~~~~FG~~L~~l~~~~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~~lK 213 (625)
...+||++|..++..++.||.+|.+|+++|+++|+.+|||||++|+..++++|++.|++|....+...++|+|+||++||
T Consensus 50 ~~~vFGv~L~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh~va~lLK 129 (246)
T 3fk2_A 50 ESNYFGVPLTTVVTPEKPIPIFIERCIEYIEATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMK 129 (246)
T ss_dssp CCSSTTSCGGGGCCSSSCSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHHHHHHHHH
T ss_pred CCCeeCCCHHHHhcCCCCCChHHHHHHHHHHHhCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHHHHHHHHH
Confidence 45699999999998888999999999999999999999999999999999999999999865555445679999999999
Q ss_pred HHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhccc
Q psy10137 214 LFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAP 291 (625)
Q Consensus 214 ~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf~P 291 (625)
.|||+||+||+|+++|+.|+.+.+..+ +++.+++.++.+||++|+.||.||+.||++|+++++.|+||+.|||+||||
T Consensus 130 ~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLAivf~P 209 (246)
T 3fk2_A 130 SFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWP 209 (246)
T ss_dssp HHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHH
T ss_pred HHHHhCCCccCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhHHHhcc
Confidence 999999999999999999999988765 789999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhh
Q psy10137 292 CILRQRHFPAQDALSDISRQTLCIELIISEQLKKLAD 328 (625)
Q Consensus 292 ~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d 328 (625)
+|+|++. ...+.+.++..+..+|++||+|+..||.+
T Consensus 210 ~Llrp~~-~~~~~~~~~~~~~~ive~LI~~~~~iF~n 245 (246)
T 3fk2_A 210 TLMRPDF-STMDALTATRTYQTIIELFIQQCPFFFYN 245 (246)
T ss_dssp HHHCCCS-SSSCHHHHHHHHHHHHHHHHHTHHHHHC-
T ss_pred cccCCCC-ccHHHHHHHHHHHHHHHHHHHhHHHhcCC
Confidence 9999854 34556778888899999999999999965
No 7
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=100.00 E-value=1.5e-40 Score=324.70 Aligned_cols=189 Identities=30% Similarity=0.569 Sum_probs=173.0
Q ss_pred cceeecccccccccCCC---CccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCc-ChHHHH
Q psy10137 134 GHRVFGVPLSQLSSSDG---KVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVY-SVHILA 209 (625)
Q Consensus 134 ~~~~FG~~L~~l~~~~~---~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~-d~~~va 209 (625)
+.++||++|+.++...+ .||.++.+|+++|+++|+.+|||||++|+..++++|++.|++|. .++++.+ |+|++|
T Consensus 5 ~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~--~~~~~~~~d~~~~a 82 (198)
T 1tx4_A 5 PNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGL--PVDFDQYNALHLPA 82 (198)
T ss_dssp TTCCTTSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTC--CCCGGGSSCTHHHH
T ss_pred CCCccCCcHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCCeeecCCcHHHHHHHHHHHhCCC--CCCccccccchHHH
Confidence 45699999999987543 89999999999999999999999999999999999999999985 3455554 899999
Q ss_pred HHHHHHHHhCCCCCCChhhHHHHHHHhcCch-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhh
Q psy10137 210 NLLKLFLREMPEPLLTFEYYEEFLRAADLTE-DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIV 288 (625)
Q Consensus 210 ~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~-~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaiv 288 (625)
++||.|||+||+||+|+++|+.|+++.+.++ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+|
T Consensus 83 ~lLK~flreLpePLi~~~l~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~v 162 (198)
T 1tx4_A 83 VILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVV 162 (198)
T ss_dssp HHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHH
T ss_pred HHHHHHHHHCCCcCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHhh
Confidence 9999999999999999999999999887655 889999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHh
Q psy10137 289 FAPCILRQRHFPAQDALSDISRQTLCIELIISEQLKKL 326 (625)
Q Consensus 289 f~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if 326 (625)
|||+|+|++. ....+.++.....++++||+|+.+||
T Consensus 163 f~P~Ll~~~~--~~~~~~~~~~~~~~v~~LI~~~~~iF 198 (198)
T 1tx4_A 163 FGPNLLWAKD--AAITLKAINPINTFTKFLLDHQGELF 198 (198)
T ss_dssp HHHHHCCCSS--HHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred hcccccCCCC--ccccHHHHHHHHHHHHHHHHhHHHhC
Confidence 9999999853 34567888889999999999999887
No 8
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=322.87 Aligned_cols=191 Identities=26% Similarity=0.489 Sum_probs=168.7
Q ss_pred ccceeecccccccccCCCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHHHH
Q psy10137 133 HGHRVFGVPLSQLSSSDGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILANLL 212 (625)
Q Consensus 133 ~~~~~FG~~L~~l~~~~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~~l 212 (625)
.++++||++|++++.. +.||.++.+|+++|+++|+.+|||||++|+...+++|++.+++|. .++++.+|+|+||++|
T Consensus 8 ~~~~vFG~~L~~~~~~-~~vP~~v~~~i~~l~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~--~~~~~~~d~~~va~lL 84 (201)
T 3msx_B 8 MPGQLFGISLPNICEN-DNLPKPVLDMLFFLNQKGPLTKGIFRQSANVKSCRELKEKLNSGV--EVHLDCESIFVIASVL 84 (201)
T ss_dssp --CCCTTSCHHHHSGG-GCCCHHHHHHHHHHHHHGGGSTTTTTSCCCHHHHHHHHHHHHHTC--CCCTTSSCHHHHHHHH
T ss_pred CCCCeeCCcHHHHhcC-CCCCHHHHHHHHHHHHhCCCCCCeeeeCCCHHHHHHHHHHhccCC--CCCCCcccHHHHHHHH
Confidence 3467999999998864 469999999999999999999999999999999999999999985 4566778999999999
Q ss_pred HHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhcc
Q psy10137 213 KLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFA 290 (625)
Q Consensus 213 K~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf~ 290 (625)
|.|||+||+||+|+++|+.|+.+.+..+ ++++.++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+|||
T Consensus 85 K~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf~ 164 (201)
T 3msx_B 85 KDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVA 164 (201)
T ss_dssp HHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHccccHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhhhhhh
Confidence 9999999999999999999999987654 78999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCchhhHHh-hHHHHHHHHHHHHhhHHHh
Q psy10137 291 PCILRQRHFPAQDALSD-ISRQTLCIELIISEQLKKL 326 (625)
Q Consensus 291 P~Llr~~~~~~~~~~~~-~~~~~~~ve~lI~~~~~if 326 (625)
|+|+|++.........+ ......+|++||+||.+||
T Consensus 165 P~ll~~~~~~~~~~~~~~~~~~~~iv~~LI~~~~~IF 201 (201)
T 3msx_B 165 PSILWPPASSSPELENEFTKKVSLLIQFLIENCLRIF 201 (201)
T ss_dssp HHHCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCCCCChHHHHHHHHHHHHHHHHHHHhhHhhC
Confidence 99999965433222222 3344456999999999987
No 9
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=100.00 E-value=1.2e-39 Score=327.73 Aligned_cols=193 Identities=29% Similarity=0.555 Sum_probs=174.1
Q ss_pred ccceeecccccccccCCC---CccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCc-ChHHH
Q psy10137 133 HGHRVFGVPLSQLSSSDG---KVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVY-SVHIL 208 (625)
Q Consensus 133 ~~~~~FG~~L~~l~~~~~---~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~-d~~~v 208 (625)
.+.++||++|+.++..++ .||.++.+|+++|+++|+.+|||||++|+..++++|++.|++|. .++++.+ |+|++
T Consensus 40 ~~~~vFG~~L~~~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~--~~~~~~~~dv~~v 117 (242)
T 1ow3_A 40 LPNQQFGVSLQHLQEKNPEQEPIPIVLRETVAYLQAHALTTEGIFRRSANTQVVREVQQKYNMGL--PVDFDQYNELHLP 117 (242)
T ss_dssp CTTCCSSSCHHHHHHHSTTCCSSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHTTC--CCCGGGSSCTHHH
T ss_pred CCCCccCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHcCCCCCceeeeCCcHHHHHHHHHHHhcCC--CCCcccccchHHH
Confidence 446799999999887543 89999999999999999999999999999999999999999985 3455554 89999
Q ss_pred HHHHHHHHHhCCCCCCChhhHHHHHHHhcCch-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhh
Q psy10137 209 ANLLKLFLREMPEPLLTFEYYEEFLRAADLTE-DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAI 287 (625)
Q Consensus 209 a~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~-~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLai 287 (625)
|++||.|||+||+||+|+++|+.|+++.+.++ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||++|||+
T Consensus 118 a~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAi 197 (242)
T 1ow3_A 118 AVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAV 197 (242)
T ss_dssp HHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHHhHH
Confidence 99999999999999999999999999887655 88999999999999999999999999999999999999999999999
Q ss_pred hccccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhhh
Q psy10137 288 VFAPCILRQRHFPAQDALSDISRQTLCIELIISEQLKKLADA 329 (625)
Q Consensus 288 vf~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d~ 329 (625)
||||+|+|++. ....+.++.....++++||+|+..||++.
T Consensus 198 vf~P~Ll~~~~--~~~~~~~~~~~~~~v~~LI~~~~~iF~~~ 237 (242)
T 1ow3_A 198 VFGPNLLWAKD--AAITLKAINPINTFTKFLLDHQGELFPSP 237 (242)
T ss_dssp HHHHHHCCCSS--HHHHHHTHHHHHHHHHHHHHTHHHHC---
T ss_pred hhcchhCCCCC--ccccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999853 44567888889999999999999999764
No 10
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=100.00 E-value=2.9e-39 Score=322.83 Aligned_cols=195 Identities=31% Similarity=0.527 Sum_probs=157.7
Q ss_pred ceeecccccccccCCC----CccceeeechhhhhhcccccccccccCCCHHHHHHHHH-HHhcCCCCCCCcc---CcChH
Q psy10137 135 HRVFGVPLSQLSSSDG----KVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKT-KIDEGKLPELELE---VYSVH 206 (625)
Q Consensus 135 ~~~FG~~L~~l~~~~~----~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~-~~~~g~~~~~~~~---~~d~~ 206 (625)
.++||++|...+..+. .+|.+|.+|+.+|+++|+.+|||||++|+..++++|++ .+|.|....++++ .+|+|
T Consensus 16 ~pvfgvpl~~~~~~~~~l~~~~p~iv~~ci~~le~~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~dvh 95 (231)
T 1f7c_A 16 EPVYNSNKDNQSEGTAQLDSIGFSIIKKCIHAVETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIK 95 (231)
T ss_dssp ---------------CCSSHHHHHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSCHH
T ss_pred CCccCCcchhccccccccCCcCccHHHHHHHHHHHhCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCccccccccHH
Confidence 3589999998776433 57999999999999999999999999999999999997 5787653445554 47999
Q ss_pred HHHHHHHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccc
Q psy10137 207 ILANLLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNS 284 (625)
Q Consensus 207 ~va~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~n 284 (625)
+||++||.|||+||+||+|+++|+.|+.+++..+ +++.+++.++.+||++|+.||.+|+.||++|+++++.|+||++|
T Consensus 96 ~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~r~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 175 (231)
T 1f7c_A 96 TITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVAN 175 (231)
T ss_dssp HHHHHHHHHHHTSSSCTTCHHHHHHHHHHHTCSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCHHH
Confidence 9999999999999999999999999999998755 78999999999999999999999999999999999999999999
Q ss_pred hhhhccccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhhhH
Q psy10137 285 LAIVFAPCILRQRHFPAQDALSDISRQTLCIELIISEQLKKLADAL 330 (625)
Q Consensus 285 Laivf~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d~~ 330 (625)
||+||||+|+|++.. ....+.++..+..+|++||+|+..||++.-
T Consensus 176 LAivf~P~Ll~~~~~-~~~~~~~~~~~~~vve~LI~~~~~iF~~~~ 220 (231)
T 1f7c_A 176 LGVVFGPTLLRPQEE-TVAAIMDIKFQNIVIEILIENHEKIFNTVP 220 (231)
T ss_dssp HHHHHHHHHSCC----CCSGGGGHHHHHHHHHHHHHTHHHHHHSCC
T ss_pred HHHHhccccCCCCcc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999998643 234567888999999999999999998664
No 11
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=309.60 Aligned_cols=189 Identities=33% Similarity=0.499 Sum_probs=167.6
Q ss_pred ccccccccC-CCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCc-ChHHHHHHHHHHHH
Q psy10137 140 VPLSQLSSS-DGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVY-SVHILANLLKLFLR 217 (625)
Q Consensus 140 ~~L~~l~~~-~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~-d~~~va~~lK~fLr 217 (625)
..|++++.. ...||.++.+|+++|+++|+++|||||++|+..++++|++.|++|... .+++.+ |+|+||++||.|||
T Consensus 4 g~L~~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~-~~~~~~~d~h~va~lLK~flr 82 (201)
T 2ovj_A 4 GMLADFVSQTSPMIPSIVVHCVNEIEQRGLTETGLYRISGCDRTVKELKEKFLRVKTV-PLLSKVDDIHAICSLLKDFLR 82 (201)
T ss_dssp CCGGGGCCSSSSCCCHHHHHHHHHHHHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCSC-CCGGGCCCHHHHHHHHHHHHH
T ss_pred CcHHHHhcccCCCCChHHHHHHHHHHHhCCCcCceeeeCCcHHHHHHHHHHHHcCCCC-ccccccCCHHHHHHHHHHHHH
Confidence 346666664 448999999999999999999999999999999999999999998532 234555 99999999999999
Q ss_pred hCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhccccccc
Q psy10137 218 EMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAPCILR 295 (625)
Q Consensus 218 ~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf~P~Llr 295 (625)
+||+||+|+++|+.|+++.+..+ +++++++.++.+||++|+.||.+|+.||++|+++ +.|+||++|||+||||+|+|
T Consensus 83 eLpePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~ll~ 161 (201)
T 2ovj_A 83 NLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTIVA 161 (201)
T ss_dssp TSSSCTTCTTTHHHHHHHHHCSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHHTC
T ss_pred hCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhhcC
Confidence 99999999999999999998765 7889999999999999999999999999999997 57999999999999999999
Q ss_pred cCCC--CchhhHHhhHHHHHHHHHHHHhhHHHhhhhH
Q psy10137 296 QRHF--PAQDALSDISRQTLCIELIISEQLKKLADAL 330 (625)
Q Consensus 296 ~~~~--~~~~~~~~~~~~~~~ve~lI~~~~~if~d~~ 330 (625)
++.. +....+.++..+..+|++||+|+.++|+.-.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~vv~~LI~~~~~if~~f~ 198 (201)
T 2ovj_A 162 HAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWSQFM 198 (201)
T ss_dssp CSSSSCCHHHHHHHHHHHHHHHHHHHHSCHHHHHGGG
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 8532 2345678999999999999999999997643
No 12
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=100.00 E-value=2.6e-39 Score=320.04 Aligned_cols=189 Identities=22% Similarity=0.429 Sum_probs=160.7
Q ss_pred ceeecccccccccC---CCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHHH
Q psy10137 135 HRVFGVPLSQLSSS---DGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILANL 211 (625)
Q Consensus 135 ~~~FG~~L~~l~~~---~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~~ 211 (625)
..+||++|++++.. ...||.+|.+|+++|+++|+.+|||||++|+..+ ++|++.|++|. ..++++.+|+|+||++
T Consensus 5 ~~~fGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~gl~~eGIfR~sG~~~~-~~l~~~~d~~~-~~~~~~~~dv~~va~l 82 (216)
T 1pbw_A 5 VEQQALTLPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNL-AELRQLLDCDT-PSVDLEMIDVHVLADA 82 (216)
T ss_dssp -------CCCHHHHCCTTSCSCHHHHHHHHHHHHHHTTCTTTTSSCCSCCT-THHHHHSCSSS-SCCCGGGBCHHHHHHH
T ss_pred cccCCCcHHHHHhccCCCCCcCHHHHHHHHHHHHcCCCCCCeeeCCChHHH-HHHHHHHHcCC-CCCCccccCHHHHHHH
Confidence 45899999999873 3489999999999999999999999999999999 99999999974 3567778899999999
Q ss_pred HHHHHHhCCCCCCChhhHHHHHHHhc-Cch--HHHHHHHHHHh--hCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchh
Q psy10137 212 LKLFLREMPEPLLTFEYYEEFLRAAD-LTE--DRVSTLFSILK--TLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLA 286 (625)
Q Consensus 212 lK~fLr~Lp~pLl~~~~y~~~l~~~~-~~~--~~~~~l~~~l~--~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLa 286 (625)
||.|||+||+||+|+++|+.|+.+.+ ..+ ++++.++.++. +||+.|+.||.||+.||++|+++++.|+||++|||
T Consensus 83 LK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLA 162 (216)
T 1pbw_A 83 FKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLS 162 (216)
T ss_dssp HHHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHH
Confidence 99999999999999999999999985 333 78999999999 99999999999999999999999999999999999
Q ss_pred hhccccccccCCCCchhhHHhhHHHHHHHHHHHHhhHHHhhhh
Q psy10137 287 IVFAPCILRQRHFPAQDALSDISRQTLCIELIISEQLKKLADA 329 (625)
Q Consensus 287 ivf~P~Llr~~~~~~~~~~~~~~~~~~~ve~lI~~~~~if~d~ 329 (625)
+||||+|+|++..... .+ ..+..+|++||+|+..||+..
T Consensus 163 ivf~P~Ll~~~~~~~~---~~-~~~~~vve~LI~~~~~iF~~~ 201 (216)
T 1pbw_A 163 EIFSPMLFRFSAASSD---NT-ENLIKVIEILISTEWNERQPA 201 (216)
T ss_dssp HHHHHHHHTCSSCCHH---HH-HHHHHHHHHHHHTTC------
T ss_pred HHHhhhcCCCCCCchh---hh-HHHHHHHHHHHhhhHHhcCCC
Confidence 9999999999654332 23 889999999999999999653
No 13
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=315.89 Aligned_cols=169 Identities=27% Similarity=0.462 Sum_probs=153.7
Q ss_pred CcccccceeecccccccccC-CCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHH
Q psy10137 129 AARSHGHRVFGVPLSQLSSS-DGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHI 207 (625)
Q Consensus 129 ~~~~~~~~~FG~~L~~l~~~-~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~ 207 (625)
.++...+++||++|..++.. +..||.+|.+|+++|+++|+.+|||||++|+..++++|++.++.+. ..++++++|+|+
T Consensus 12 ~~~~~~~~vFGv~L~~~~~~~~~~vP~~v~~~i~~l~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~-~~~~~~~~~~~~ 90 (228)
T 3kuq_A 12 ENLYFQGSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAI-DCVNYEGQSAYD 90 (228)
T ss_dssp --CBCTTSSTTCCHHHHHHHHSSSSCHHHHHHHHHHHHHCTTSTTTTTSCCCHHHHHHHHHHHTBSS-SCCCCTTCCHHH
T ss_pred CCCCCCCCEECCchHHHHHHcCCCCCHHHHHHHHHHHHhCCCcCCeeecCCCHHHHHHHHHHHhcCC-CcCCcccCCHHH
Confidence 34456778999999998864 4589999999999999999999999999999999999999998753 346677889999
Q ss_pred HHHHHHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccch
Q psy10137 208 LANLLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSL 285 (625)
Q Consensus 208 va~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nL 285 (625)
||++||.|||+||+||+|+++|+.|+.+++..+ +++++++.++.+||++|+.||.+|+.||++|+++++.|+||+.||
T Consensus 91 va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NL 170 (228)
T 3kuq_A 91 VADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNL 170 (228)
T ss_dssp HHHHHHHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccccCCchhHh
Confidence 999999999999999999999999999986443 789999999999999999999999999999999999999999999
Q ss_pred hhhccccccccCC
Q psy10137 286 AIVFAPCILRQRH 298 (625)
Q Consensus 286 aivf~P~Llr~~~ 298 (625)
|+||||+|||++.
T Consensus 171 Aivf~P~Ll~~~~ 183 (228)
T 3kuq_A 171 AVCLAPSLFHLNT 183 (228)
T ss_dssp HHHHHHHHHTCCC
T ss_pred HHHHhhhhcCCCC
Confidence 9999999999854
No 14
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=315.75 Aligned_cols=191 Identities=28% Similarity=0.446 Sum_probs=159.5
Q ss_pred cccceeeccccccccc----CCCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHH
Q psy10137 132 SHGHRVFGVPLSQLSS----SDGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHI 207 (625)
Q Consensus 132 ~~~~~~FG~~L~~l~~----~~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~ 207 (625)
..++++||++|++++. ..+.||.+|.+|+.+|++ |+.+|||||++|+...+++|++.||+|... +..+|+|+
T Consensus 59 ~~~~~vFGv~L~~l~~~~~~~~~~iP~~l~~~~~~le~-gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~---~~~~~~~~ 134 (271)
T 3eap_A 59 EIGGKIFGVPFNALPHSAVPEYGHIPSFLVDACTSLED-HIHTEGLFRKSGSVIRLKALKNKVDHGEGC---LSSAPPCD 134 (271)
T ss_dssp --CCSSTTSCGGGSCEEEETTTEEEEHHHHHHHHHHGG-GTTC--------CHHHHHHHHHHHHHC--------CCCHHH
T ss_pred CCCCCeeCCcHHHHHhhccCCCCCcChHHHHHHHHHHh-CCCCCCeeeeCCCHHHHHHHHHHHHcCCCC---cccccHHH
Confidence 3456799999999875 245799999999999985 899999999999999999999999998532 35679999
Q ss_pred HHHHHHHHHHhCCCCCCChhhHHHHHHHhcCch-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchh
Q psy10137 208 LANLLKLFLREMPEPLLTFEYYEEFLRAADLTE-DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLA 286 (625)
Q Consensus 208 va~~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~-~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLa 286 (625)
||++||.|||+||+||+|+++|+.|+.+.+..+ ++...++.++..||++|+.||.||+.||++|+++++.|+||++|||
T Consensus 135 va~lLK~fLReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA 214 (271)
T 3eap_A 135 IAGLLKQFFRELPEPILPADLHEALLKAQQLGTEEKNKATLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLA 214 (271)
T ss_dssp HHHHHHHHHHHSSSCSSCGGGHHHHHHHTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHHhCCcccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHH
Confidence 999999999999999999999999999998876 6888888899999999999999999999999999999999999999
Q ss_pred hhccccccccCCCCc---hhhHHhhHHHHHHHHHHHHhhHHHh
Q psy10137 287 IVFAPCILRQRHFPA---QDALSDISRQTLCIELIISEQLKKL 326 (625)
Q Consensus 287 ivf~P~Llr~~~~~~---~~~~~~~~~~~~~ve~lI~~~~~if 326 (625)
+||||+|+|++.... .....++..++.+|++||+|+.+||
T Consensus 215 ivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~IF 257 (271)
T 3eap_A 215 VIFAPNLLQTSEGHEKMSSNTEKKLRLQAAVVQTLIDYASDIG 257 (271)
T ss_dssp HHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHTGGGTT
T ss_pred HHHHhHhccCCCCccchhhhHHHHHHHHHHHHHHHHHhHHHHh
Confidence 999999999965222 1234677889999999999999998
No 15
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=307.04 Aligned_cols=180 Identities=25% Similarity=0.286 Sum_probs=145.3
Q ss_pred cceeeccccccccc---CCCCccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHH
Q psy10137 134 GHRVFGVPLSQLSS---SDGKVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILAN 210 (625)
Q Consensus 134 ~~~~FG~~L~~l~~---~~~~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~ 210 (625)
..++||++|++++. ....||.+|.+|+++|+++|+.+|||||++|+. |++ +...++++.+|+|+||+
T Consensus 19 ~~~vFGv~L~~l~~~~~~~~~vP~iv~~~i~~l~~~Gl~~eGIfR~sG~~-----lr~-----~~~~~dl~~~dvh~va~ 88 (214)
T 2xs6_A 19 YFQSMGLTLPDLPEQFSPPDVAPPLLVKLVEAIERTGLDSESHYRPELPA-----PRT-----DWSLSDVDQWDTAALAD 88 (214)
T ss_dssp ------CCCCCHHHHCCTTCCSCHHHHHHHHHHHHHCTTCSGGGCCSCCC-----CCC-----CCCCTTGGGCCHHHHHH
T ss_pred CCcccCcCHHHHHHhhCCCCCCCHHHHHHHHHHHHhCCCCCCCeeeCHHH-----HHh-----ccccCCCccCCHHHHHH
Confidence 45699999999887 234899999999999999999999999999999 333 22346677789999999
Q ss_pred HHHHHHHhCCCCCCChhhHHHHHHHhcCch--HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhh
Q psy10137 211 LLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIV 288 (625)
Q Consensus 211 ~lK~fLr~Lp~pLl~~~~y~~~l~~~~~~~--~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaiv 288 (625)
+||.|||+||+||+|+++|+.|+.+.+..+ +++. .++.+||++|+.||.||+.||++|+++++.|+||++|||+|
T Consensus 89 lLK~flReLPePLi~~~ly~~~i~~~~~~~~~~~~~---~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAiv 165 (214)
T 2xs6_A 89 GIKSFLLALPAPLVTPEASAEARRALREAAGPVGPA---LEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGAT 165 (214)
T ss_dssp HHHHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGGG---GSTTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHH---HHHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHH
Confidence 999999999999999999999999987654 3333 78999999999999999999999999999999999999999
Q ss_pred ccccccccCCCC--------chhhHHhhHHHHHHHHHHHHhhHHHhhh
Q psy10137 289 FAPCILRQRHFP--------AQDALSDISRQTLCIELIISEQLKKLAD 328 (625)
Q Consensus 289 f~P~Llr~~~~~--------~~~~~~~~~~~~~~ve~lI~~~~~if~d 328 (625)
|||+|+|++... ...++.++..+..+|++||+| .+|..
T Consensus 166 f~P~Ll~~~~~~~~~~~~~~~~~~~~d~~~~~~vve~LI~n--~ife~ 211 (214)
T 2xs6_A 166 FGPLLLRAPPPPSSPPPGGAPDGSEPSPDFPALLVEKLLQE--HLEEQ 211 (214)
T ss_dssp HHHHHHC------------------CCTTHHHHHHHHHHHH--HHHC-
T ss_pred HhhhhcCCcccccccccccchhhhHHhHHHHHHHHHHHHhh--hcccc
Confidence 999999996532 245678999999999999987 45544
No 16
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=99.97 E-value=6.3e-32 Score=287.09 Aligned_cols=141 Identities=22% Similarity=0.372 Sum_probs=131.4
Q ss_pred CccceeeechhhhhhcccccccccccCCCHHHHHHHHHHHhcCCCCCCCccCcChHHHHHHHHHHHHhCCCCCCChhhHH
Q psy10137 151 KVPSLVDRLITTIELRGIYTEGIYRKSGIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYE 230 (625)
Q Consensus 151 ~vP~vl~~~i~~ie~~gl~~eGIfR~sg~~~~v~~L~~~~~~g~~~~~~~~~~d~~~va~~lK~fLr~Lp~pLl~~~~y~ 230 (625)
.||.+|.+|+.+|+++|+.+|||||++|+..++++|++.||.|... ++. .|+|++|++||.|||+||+||+|+++|+
T Consensus 198 ~iP~~v~~~i~~l~~~Gl~~eGIFR~~G~~~~v~~L~~~~d~~~~~--~~~-~dvh~va~lLK~fLReLPePLi~~~ly~ 274 (366)
T 3qis_A 198 QVPKEIWLLVDHLFKYACHQEDLFQTPGMQEELQQIIDCLDTSIPE--TIP-GSNHSVAEALLIFLEALPEPVICYELYQ 274 (366)
T ss_dssp SSCHHHHHHHHHHHHHCTTCTTTTTSCCCHHHHHHHHHHHHHCCCS--SCC-SCHHHHHHHHHHHHHHCSSCSSCHHHHH
T ss_pred CcChHHHHHHHHHHhcCCCCCCeEeCCCCHHHHHHHHHHHcCCCCC--ccc-cCHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 7899999999999999999999999999999999999999998643 333 3999999999999999999999999999
Q ss_pred HHHHHhcCchHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhccCcCCCCccchhhhccccccccCC
Q psy10137 231 EFLRAADLTEDRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAPCILRQRH 298 (625)
Q Consensus 231 ~~l~~~~~~~~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~~~~~~NkMt~~nLaivf~P~Llr~~~ 298 (625)
.|+.+.+.. +.++.++.+||++|+.||.||+.||++|+++++.|+||++|||+||||+|||++.
T Consensus 275 ~~~~~~~~~----~~~~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~ 338 (366)
T 3qis_A 275 RCLDSAYDP----RICRQVISQLPRCHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPP 338 (366)
T ss_dssp HHHHHTTCH----HHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC
T ss_pred HHHHHhhhH----HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCC
Confidence 999998743 4578899999999999999999999999999999999999999999999999964
No 17
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=99.96 E-value=2.4e-30 Score=254.57 Aligned_cols=160 Identities=23% Similarity=0.339 Sum_probs=140.3
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--EDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~~~ 450 (625)
+|+.++||||++|+.+++++|++.+++|...++...++|+|+||++||.|||+||+||+|.++|+.|+.+++.. ++++
T Consensus 41 ~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~~va~lLK~flreLPePLi~~~l~~~~~~~~~~~~~~~~~ 120 (209)
T 2ee4_A 41 TGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERL 120 (209)
T ss_dssp TCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHHHHHHHHHHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHH
T ss_pred hCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHH
Confidence 58999999999999999999999999987554432357999999999999999999999999999999998764 4789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCC-----CchhHHHHHHHHHHhHh
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGK-----LPESELAIHSKIQELKT 525 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~-----~~~~~~~~~~~I~~l~~ 525 (625)
+.++.++.+||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+++..++. .......+...|.++..
T Consensus 121 ~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLaivf~P~L~~~~~~~~~~l~~~~~~~~vve~LI~~~~~ 200 (209)
T 2ee4_A 121 HALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQF 200 (209)
T ss_dssp HHHHHHTTTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHSCCCCCSSCCSCCCTTHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHhcccccCCCCccHHHHHHhHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999999999999876542 12345677788888888
Q ss_pred hcccCCc
Q psy10137 526 KIDEGKL 532 (625)
Q Consensus 526 ~~d~~~~ 532 (625)
.|.++++
T Consensus 201 iF~~~~~ 207 (209)
T 2ee4_A 201 FFYNGEI 207 (209)
T ss_dssp HTTCCCC
T ss_pred HcCCCCC
Confidence 8877653
No 18
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=99.96 E-value=5.7e-30 Score=252.79 Aligned_cols=135 Identities=28% Similarity=0.504 Sum_probs=124.4
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCc-chhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVY-SVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--EDR 449 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~-d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~~ 449 (625)
+|+.++||||++|+.+++++|++.+|+|...+++...+ |+|+||++||.|||+||+||+|.++|+.|+.+.+.. +++
T Consensus 49 ~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~dvh~va~lLK~flreLPePLl~~~l~~~~~~~~~~~~~~~~ 128 (214)
T 3byi_A 49 RGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTR 128 (214)
T ss_dssp HTTTSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGCSHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHH
T ss_pred hCCCCCCccccCCCHHHHHHHHHHHhcCCCCCCCcccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHH
Confidence 58999999999999999999999999997655543334 999999999999999999999999999999998754 478
Q ss_pred HHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 450 VSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 450 ~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
++.++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+++..+.
T Consensus 129 ~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~NLa~vf~P~Ll~~~~~~ 186 (214)
T 3byi_A 129 IEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTLLRAENET 186 (214)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHCCTTSS
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHHHhHHHhccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999987654
No 19
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=99.96 E-value=2.1e-29 Score=246.42 Aligned_cols=133 Identities=24% Similarity=0.369 Sum_probs=124.1
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--EDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~~~ 450 (625)
+|+.++||||++|+.+++++|++.+++|... +++.+|+|+||++||.|||+||+||+|.++|+.|+.+.+.. ++++
T Consensus 40 ~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~--~~~~~d~~~va~lLK~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~ 117 (201)
T 3msx_B 40 KGPLTKGIFRQSANVKSCRELKEKLNSGVEV--HLDCESIFVIASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKI 117 (201)
T ss_dssp HGGGSTTTTTSCCCHHHHHHHHHHHHHTCCC--CTTSSCHHHHHHHHHHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHH
T ss_pred hCCCCCCeeeeCCCHHHHHHHHHHhccCCCC--CCCcccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHccccHHHHH
Confidence 5889999999999999999999999999744 45567999999999999999999999999999999998764 4789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
+.++.++.+||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+|++...
T Consensus 118 ~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf~P~ll~~~~~~ 174 (201)
T 3msx_B 118 NTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNLAVCVAPSILWPPASS 174 (201)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHCCCCTTS
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhhhhhhhccccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999987654
No 20
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=247.05 Aligned_cols=135 Identities=27% Similarity=0.531 Sum_probs=122.5
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccC-CCCCCCcCC-cchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEG-KLPELELEV-YSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--ED 448 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~-~~~~~~~~~-~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~ 448 (625)
+|+.++||||++|+.+++++|++.+|++ ...+++... .|+|+||++||.|||+||+||+|.++|+.|+.+.+.. ++
T Consensus 38 ~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~d~~~~~~~d~~~va~lLK~flreLpePLl~~~~~~~~~~~~~~~~~~~ 117 (202)
T 2osa_A 38 RGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDE 117 (202)
T ss_dssp HCTTSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHHHHHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHH
T ss_pred hCCCcCCeeeecCcHHHHHHHHHHHHcCCCccCCCccccccHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHHhcCCHHH
Confidence 5899999999999999999999999985 333444323 4999999999999999999999999999999998764 47
Q ss_pred HHHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 449 RVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 449 ~~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
+++.++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|++++...
T Consensus 118 ~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~NLa~vf~P~Ll~~~~~~ 176 (202)
T 2osa_A 118 QLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELD 176 (202)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCCCCC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHccccCCCCCcc
Confidence 89999999999999999999999999999999999999999999999999999987654
No 21
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=99.96 E-value=3e-29 Score=252.57 Aligned_cols=136 Identities=23% Similarity=0.396 Sum_probs=126.2
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--EDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~~~ 450 (625)
+|+.++||||++|+.+++++|++.+|+|...++...++|+|+||++||.|||+||+||+|+++|+.|+.+.... ++++
T Consensus 82 ~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh~va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~ 161 (246)
T 3fk2_A 82 TGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKL 161 (246)
T ss_dssp HCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHH
T ss_pred hCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHHHHHHHHHHHHHhCCCccCCHHHHHHHHHHhccCCHHHHH
Confidence 58999999999999999999999999998766665667999999999999999999999999999999998764 4789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCC
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGK 508 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~ 508 (625)
+.++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+|+..+..
T Consensus 162 ~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLAivf~P~Llrp~~~~~ 219 (246)
T 3fk2_A 162 HALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLSICFWPTLMRPDFSTM 219 (246)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHHCCCSSSS
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhHHHhcccccCCCCccH
Confidence 9999999999999999999999999999999999999999999999999999765543
No 22
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=252.39 Aligned_cols=137 Identities=24% Similarity=0.354 Sum_probs=123.4
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhcc--chHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADL--TEDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~--~~~~~ 450 (625)
+|+.++||||++|+.+++++|++.++.+. ..++++++|+|+||++||.|||+||+||||.++|+.|+.+++. .++++
T Consensus 50 ~gl~~eGIfR~sG~~~~i~~L~~~~d~~~-~~~~~~~~~~~~va~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~ 128 (228)
T 3kuq_A 50 HCLDQVGLFRKSGVKSRIQALRQMNEGAI-DCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRL 128 (228)
T ss_dssp HCTTSTTTTTSCCCHHHHHHHHHHHTBSS-SCCCCTTCCHHHHHHHHHHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHH
T ss_pred hCCCcCCeeecCCCHHHHHHHHHHHhcCC-CcCCcccCCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHH
Confidence 58999999999999999999999998764 2456677899999999999999999999999999999998875 35789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCCCc
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGKLP 510 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~~~ 510 (625)
++++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+||+++......
T Consensus 129 ~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~s 188 (228)
T 3kuq_A 129 QAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCLAPSLFHLNTLKREN 188 (228)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHTCCCC----
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccccCCchhHhHHHHhhhhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999987654433
No 23
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=99.96 E-value=1.8e-29 Score=246.29 Aligned_cols=131 Identities=30% Similarity=0.525 Sum_probs=121.5
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCc-chhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc-hHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVY-SVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT-EDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~-d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~-~~~~ 450 (625)
+|+.++||||++|+.+++++|++.+|+|...++ +.+ |+|++|++||.|||+||+||+|.++|+.|+.+.+.. ++++
T Consensus 40 ~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~--~~~~d~~~~a~lLK~flreLpePLi~~~l~~~~~~~~~~~~~~~~ 117 (198)
T 1tx4_A 40 HALTTEGIFRRSANTQVVREVQQKYNMGLPVDF--DQYNALHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRV 117 (198)
T ss_dssp HCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCG--GGSSCTHHHHHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHH
T ss_pred hCCCCCCeeecCCcHHHHHHHHHHHhCCCCCCc--cccccchHHHHHHHHHHHHCCCcCCCHHHHHHHHHHHcCCHHHHH
Confidence 689999999999999999999999999975443 343 899999999999999999999999999999987654 4789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccC
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKID 505 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~ 505 (625)
+.++.++.+||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+++++
T Consensus 118 ~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~vf~P~Ll~~~~ 172 (198)
T 1tx4_A 118 PATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKD 172 (198)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCSS
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHhhhcccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999764
No 24
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=99.96 E-value=3.8e-29 Score=247.14 Aligned_cols=133 Identities=20% Similarity=0.377 Sum_probs=123.6
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhcc---chHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADL---TEDR 449 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~---~~~~ 449 (625)
+|+.++||||++|+.++ ++|++.||+|. ..++++.+|+|+||++||.|||+||+||||.++|+.|+.+.+. .+++
T Consensus 39 ~gl~~eGIfR~sG~~~~-~~l~~~~d~~~-~~~~~~~~dv~~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~ 116 (216)
T 1pbw_A 39 KGLECSTLYRTQSSSNL-AELRQLLDCDT-PSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEY 116 (216)
T ss_dssp HHTTCTTTTSSCCSCCT-THHHHHSCSSS-SCCCGGGBCHHHHHHHHHHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHH
T ss_pred cCCCCCCeeeCCChHHH-HHHHHHHHcCC-CCCCccccCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 69999999999999999 99999999985 3456677899999999999999999999999999999999852 3478
Q ss_pred HHHHHHHHh--hCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 450 VSTLFSILK--TLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 450 ~~~~~~li~--~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
++.++.++. +||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|++++.+.
T Consensus 117 ~~~l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~ 176 (216)
T 1pbw_A 117 IQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAAS 176 (216)
T ss_dssp HHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHTCSSCC
T ss_pred HHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHHhhhcCCCCCCc
Confidence 999999999 9999999999999999999999999999999999999999999987765
No 25
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=99.96 E-value=7.8e-29 Score=247.31 Aligned_cols=157 Identities=28% Similarity=0.456 Sum_probs=126.2
Q ss_pred ccccCCCCCCCCcccchHHHHHH-HhccCCCCCCCcC---CcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKT-KIDEGKLPELELE---VYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT-- 446 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~-~l~~~~~~~~~~~---~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~-- 446 (625)
+|+.++||||++|+.+++++|++ .+|.|....++++ .+|+|+||++||.|||+||+||+|.++|+.|+.+++..
T Consensus 51 ~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~dvh~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~ 130 (231)
T 1f7c_A 51 RGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWEIKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQ 130 (231)
T ss_dssp HCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSCHHHHHHHHHHHHHTSSSCTTCHHHHHHHHHHHTCSSH
T ss_pred hCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCccccccccHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhcCCH
Confidence 58899999999999999999987 5788754444443 47999999999999999999999999999999998764
Q ss_pred hHHHHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCCCch-----hHHHHHHHHH
Q psy10137 447 EDRVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGKLPE-----SELAIHSKIQ 521 (625)
Q Consensus 447 ~~~~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~~~~-----~~~~~~~~I~ 521 (625)
+++++.++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|++++.+..... ....+...|.
T Consensus 131 ~~r~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~~~~~~~~~~~vve~LI~ 210 (231)
T 1f7c_A 131 ESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIE 210 (231)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHSCC---CCSGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999876543221 1223444555
Q ss_pred HhHhhccc
Q psy10137 522 ELKTKIDE 529 (625)
Q Consensus 522 ~l~~~~d~ 529 (625)
++...|..
T Consensus 211 ~~~~iF~~ 218 (231)
T 1f7c_A 211 NHEKIFNT 218 (231)
T ss_dssp THHHHHHS
T ss_pred HHHHhCCC
Confidence 55554444
No 26
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=99.96 E-value=5.9e-29 Score=243.03 Aligned_cols=133 Identities=29% Similarity=0.454 Sum_probs=120.9
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCc-chhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVY-SVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--EDR 449 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~-d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~~ 449 (625)
+|+.++||||++|+.+++++|++.+++|.... +++.+ |+|+||++||.|||+||+||+|.++|+.|+.+.+.. +++
T Consensus 31 ~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~~-~~~~~~d~h~va~lLK~flreLpePLi~~~l~~~~~~~~~~~~~~~~ 109 (201)
T 2ovj_A 31 RGLTETGLYRISGCDRTVKELKEKFLRVKTVP-LLSKVDDIHAICSLLKDFLRNLKEPLLTFRLNRAFMEAAEITDEDNS 109 (201)
T ss_dssp HTTTSTTTTTSCCCHHHHHHHHHHHHTTCSCC-CGGGCCCHHHHHHHHHHHHHTSSSCTTCTTTHHHHHHHHHCSSHHHH
T ss_pred hCCCcCceeeeCCcHHHHHHHHHHHHcCCCCc-cccccCCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHH
Confidence 58999999999999999999999999986432 23455 999999999999999999999999999999998764 478
Q ss_pred HHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 450 VSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 450 ~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
++.++.++.+||+.|+.+|.||+.||++|+++ +.|+||++|||+||||+|++++..+
T Consensus 110 ~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~ll~~~~~~ 166 (201)
T 2ovj_A 110 IAAMYQAVGELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTIVAHAVPN 166 (201)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHHTCCSSSS
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhhcCCCCCC
Confidence 89999999999999999999999999999996 6899999999999999999976554
No 27
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=99.95 E-value=9.6e-29 Score=246.50 Aligned_cols=157 Identities=26% Similarity=0.448 Sum_probs=130.4
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCC--cchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEV--YSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--ED 448 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~--~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~ 448 (625)
+|+ +|||||++|+.+++++|++.+++|...++..+. +|+|+||++||.|||+||+||+|.++|+.|+.+.+.. ++
T Consensus 51 ~gl-~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~~dvh~va~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~ 129 (229)
T 3iug_A 51 YGI-VDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIHSVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEE 129 (229)
T ss_dssp HCC-STTTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTTTCHHHHHHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHH
T ss_pred cCC-CCCCeecCCcHHHHHHHHHHHhcCCCCCccccccccchHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHH
Confidence 467 799999999999999999999999866655433 4999999999999999999999999999999998764 47
Q ss_pred HHHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCC-----------CchhHHHHH
Q psy10137 449 RVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGK-----------LPESELAIH 517 (625)
Q Consensus 449 ~~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~-----------~~~~~~~~~ 517 (625)
++..++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|++++.... .......+.
T Consensus 130 ~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~~~vve 209 (229)
T 3iug_A 130 RLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVE 209 (229)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHCCC-------------------CHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCChHHHHHHHhccccCCCcccccccchHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999875321 111234555
Q ss_pred HHHHHhHhhcccC
Q psy10137 518 SKIQELKTKIDEG 530 (625)
Q Consensus 518 ~~I~~l~~~~d~~ 530 (625)
..|.++...|...
T Consensus 210 ~LI~~~~~iF~~~ 222 (229)
T 3iug_A 210 FILNHVDVLFSGR 222 (229)
T ss_dssp HHHHTHHHHTC--
T ss_pred HHHHhHHHhCCCc
Confidence 6666666666653
No 28
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=99.95 E-value=1.4e-28 Score=247.17 Aligned_cols=131 Identities=30% Similarity=0.522 Sum_probs=121.6
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCc-chhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc-hHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVY-SVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT-EDRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~-d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~-~~~~ 450 (625)
+|+.++||||++|+.+++++|++.+|+|...++ +.+ |+|++|++||.|||+||+||+|.++|+.|+.+.+.. ++++
T Consensus 76 ~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~--~~~~dv~~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~ 153 (242)
T 1ow3_A 76 HALTTEGIFRRSANTQVVREVQQKYNMGLPVDF--DQYNELHLPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRV 153 (242)
T ss_dssp HCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCG--GGSSCTHHHHHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHH
T ss_pred cCCCCCceeeeCCcHHHHHHHHHHHhcCCCCCc--ccccchHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCHHHHH
Confidence 589999999999999999999999999975443 444 899999999999999999999999999999987754 5789
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccC
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKID 505 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~ 505 (625)
+.++.++.+||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+++++
T Consensus 154 ~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~ 208 (242)
T 1ow3_A 154 PATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLAVVFGPNLLWAKD 208 (242)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCSS
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHHhHHhhcchhCCCCC
Confidence 9999999999999999999999999999999999999999999999999999764
No 29
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=99.94 E-value=2.2e-27 Score=242.17 Aligned_cols=131 Identities=24% Similarity=0.360 Sum_probs=111.1
Q ss_pred cccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccch-HHHHH
Q psy10137 374 QIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLTE-DRVST 452 (625)
Q Consensus 374 ~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~~-~~~~~ 452 (625)
|+.++||||++|+.+++++|++.||+|... +..+|+|+||++||.|||+||+||||+++|+.|+.+.+..+ ++...
T Consensus 97 gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~---~~~~~~~~va~lLK~fLReLPePLl~~~ly~~~~~~~~~~~~~~~~~ 173 (271)
T 3eap_A 97 HIHTEGLFRKSGSVIRLKALKNKVDHGEGC---LSSAPPCDIAGLLKQFFRELPEPILPADLHEALLKAQQLGTEEKNKA 173 (271)
T ss_dssp GTTC--------CHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHSSSCSSCGGGHHHHHHHTTSCHHHHHHH
T ss_pred CCCCCCeeeeCCCHHHHHHHHHHHHcCCCC---cccccHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHhHHHHHHH
Confidence 689999999999999999999999998754 34679999999999999999999999999999999988754 67888
Q ss_pred HHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 453 LFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 453 ~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|++++++.
T Consensus 174 ~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~ 228 (271)
T 3eap_A 174 TLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFAPNLLQTSEGH 228 (271)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHhHhccCCCCc
Confidence 8889999999999999999999999999999999999999999999999988643
No 30
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=99.93 E-value=5.4e-26 Score=249.40 Aligned_cols=136 Identities=27% Similarity=0.521 Sum_probs=123.3
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCC-CCCCCcCC-cchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccc--hH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGK-LPELELEV-YSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLT--ED 448 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~-~~~~~~~~-~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~--~~ 448 (625)
+|+.++||||++|+.+++++|++.||++. ..+++.+. .|+|+||++||.|||+||+||||.++|+.|+.+++.. ++
T Consensus 299 ~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~dv~~va~lLK~flReLPePLi~~~ly~~~~~~~~~~~~~~ 378 (463)
T 3cxl_A 299 RGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDE 378 (463)
T ss_dssp HCSCSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHHHHHHHHHHHHHHCSSCSSCTTTHHHHHHHHHCCCHHH
T ss_pred cCCCCCceeEecCCHHHHHHHHHHHHhcCCcCCcccccCCCcchhhhHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCHHH
Confidence 68999999999999999999999999853 33444322 4999999999999999999999999999999998763 57
Q ss_pred HHHHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCCC
Q psy10137 449 RVSTLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEGK 508 (625)
Q Consensus 449 ~~~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~~ 508 (625)
+++.++.++..||++|+.+|.||+.||++|+++++.|+||++|||+||||+|+++++...
T Consensus 379 ~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLAivf~P~Ll~~~~~~~ 438 (463)
T 3cxl_A 379 QLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDA 438 (463)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHHHHHCCCCCSCT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHHHHhhccccCCCCccH
Confidence 899999999999999999999999999999999999999999999999999999887653
No 31
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=99.93 E-value=4.5e-26 Score=242.01 Aligned_cols=128 Identities=20% Similarity=0.290 Sum_probs=117.0
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccchHHHHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLTEDRVST 452 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~~~~~~~ 452 (625)
+|+.++||||++|+.+++++|++.+|+|...+++ .|+|++|++||.|||+||+||||+++|+.|+.+.+. .+.
T Consensus 213 ~Gl~~eGIFR~~G~~~~v~~L~~~~d~~~~~~~~---~dvh~va~lLK~fLReLPePLi~~~ly~~~~~~~~~----~~~ 285 (366)
T 3qis_A 213 YACHQEDLFQTPGMQEELQQIIDCLDTSIPETIP---GSNHSVAEALLIFLEALPEPVICYELYQRCLDSAYD----PRI 285 (366)
T ss_dssp HCTTCTTTTTSCCCHHHHHHHHHHHHHCCCSSCC---SCHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHHTTC----HHH
T ss_pred cCCCCCCeEeCCCCHHHHHHHHHHHcCCCCCccc---cCHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHhhh----HHH
Confidence 5889999999999999999999999999765433 399999999999999999999999999999999874 356
Q ss_pred HHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 453 LFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 453 ~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
++.++..||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|||++.+.
T Consensus 286 ~~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~~~ 340 (366)
T 3qis_A 286 CRQVISQLPRCHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPPNL 340 (366)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC--
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCCcc
Confidence 7889999999999999999999999999999999999999999999999988754
No 32
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=99.92 E-value=7e-27 Score=229.66 Aligned_cols=122 Identities=23% Similarity=0.146 Sum_probs=102.8
Q ss_pred ccccCCCCCCCCcccchHHHHHHHhccCCCCCCCcCCcchhHHHHHHHHHHhcCCCCCCChhhHHHHHHHhccch--HHH
Q psy10137 373 RQIRSSKPKPFPQIHSKIQELKTKIDEGKLPELELEVYSVHILANLLKLFLREMPEPLLTFEYYEEFLRAADLTE--DRV 450 (625)
Q Consensus 373 ~~l~~~gifR~~G~~~~i~~L~~~l~~~~~~~~~~~~~d~~~va~lLK~flr~LpePLi~~~l~~~~~~~~~~~~--~~~ 450 (625)
+|+.+|||||++|+. |++ .+ ...+++.+|+|+||++||.|||+||+||||.++|+.|+++++..+ ++.
T Consensus 54 ~Gl~~eGIfR~sG~~-----lr~---~~--~~~dl~~~dvh~va~lLK~flReLPePLi~~~ly~~~i~~~~~~~~~~~~ 123 (214)
T 2xs6_A 54 TGLDSESHYRPELPA-----PRT---DW--SLSDVDQWDTAALADGIKSFLLALPAPLVTPEASAEARRALREAAGPVGP 123 (214)
T ss_dssp HCTTCSGGGCCSCCC-----CCC---CC--CCTTGGGCCHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGG
T ss_pred hCCCCCCCeeeCHHH-----HHh---cc--ccCCCccCCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHH
Confidence 489999999999988 443 12 235566789999999999999999999999999999999987643 233
Q ss_pred HHHHHHHhhCChhhHHHHHHHHHHHHHHHhcccccCCcccccccccccccccccCCC
Q psy10137 451 STLFSILKTLPKPNFDLMERLIFHLARVAYHEEANRMTPNSLAIVFAQELKTKIDEG 507 (625)
Q Consensus 451 ~~~~~li~~Lp~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa~~faP~ll~~~~~~ 507 (625)
. .++.+||+.|+.+|.||+.||++|+++++.|+||++|||+||||+|+|++.+.
T Consensus 124 ~---~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~Ll~~~~~~ 177 (214)
T 2xs6_A 124 A---LEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGATFGPLLLRAPPPP 177 (214)
T ss_dssp G---GSTTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC-----
T ss_pred H---HHHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHhhhhcCCcccc
Confidence 2 68899999999999999999999999999999999999999999999988753
No 33
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.41 E-value=6e-14 Score=114.48 Aligned_cols=60 Identities=20% Similarity=0.488 Sum_probs=55.3
Q ss_pred cccccCCCeeceeEeccCCccccccccccccccccccccccccccccccccccccccccc
Q psy10137 66 DRIVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLA 125 (625)
Q Consensus 66 ~~~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~ 125 (625)
+...++||.|..++|..||+|++|+++||++.+||++|++|+++||++|..+++..|...
T Consensus 17 ~~~~~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~ 76 (77)
T 2enn_A 17 KVHHVKCHEFTATFFPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDKVIAKCTGS 76 (77)
T ss_dssp CCEESSSCEEEEECCSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSSCCSCCCCC
T ss_pred ccccCCCCccEEEcCCCCcCccccChhhccccccccCcCCCCCcCCHhHHhhCcCCCCCC
Confidence 356689999999999999999999999888889999999999999999999999999753
No 34
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=2.2e-13 Score=112.88 Aligned_cols=60 Identities=23% Similarity=0.523 Sum_probs=55.8
Q ss_pred ccccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccc
Q psy10137 67 RIVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLAR 126 (625)
Q Consensus 67 ~~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~ 126 (625)
...++||.|..++|..||+|++|+++||++.+||++|.+|+++||++|..+++..|....
T Consensus 12 ~~~~~~H~F~~~~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~v~~~C~~~~ 71 (83)
T 2yuu_A 12 IHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTA 71 (83)
T ss_dssp EECGGGCCEEEECCSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGTCCSCCSSCC
T ss_pred CcccCCCceEeEeCCCCcChhhcChhhccccccccccCCcCCeeChhhhhhCCCcCCCcc
Confidence 556889999999999999999999998888899999999999999999999999998664
No 35
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=99.30 E-value=8.3e-13 Score=104.15 Aligned_cols=56 Identities=27% Similarity=0.600 Sum_probs=52.4
Q ss_pred ccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGL 124 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~ 124 (625)
...+|.|..+++..||+|++|++++|+..+||++|++|+++||++|..+++..|+.
T Consensus 9 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~ 64 (65)
T 2enz_A 9 IDMPHRFKVYNYKSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTKVANLCGI 64 (65)
T ss_dssp CCCCCCEEECCCCSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTTSCSCTTT
T ss_pred CCCCCccEeEcCCCCcCchhcChhheecCCcccccCCCCCccCHhHHhhCcCcCCC
Confidence 35799999999999999999999998888999999999999999999999999963
No 36
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.28 E-value=5.4e-13 Score=109.37 Aligned_cols=58 Identities=28% Similarity=0.627 Sum_probs=53.3
Q ss_pred ccccCCCeeceeEeccCCccccccccccccccc--ccccccccccccccccc---cccccccc
Q psy10137 67 RIVYLGHELESKIINIPTACEICNSLFKWPIER--MLVCQNCRHTCHRKCYT---RIMGECGL 124 (625)
Q Consensus 67 ~~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~q--g~~C~~C~~~~HkkC~~---~i~~~C~~ 124 (625)
.+.++||.|..++|..||+|++|+++||+.++| |++|+.|+++||++|.. .++..|+.
T Consensus 19 ~~~~~~H~F~~~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~k~~~v~~~C~~ 81 (84)
T 2row_A 19 YICHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMDKKEEIIAPCKV 81 (84)
T ss_dssp CEEETTEEEEEECCSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHHHTCTTCCCCST
T ss_pred eEEcCCcceEeEcCCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhCCccccccccCc
Confidence 356889999999999999999999998888887 99999999999999999 68888974
No 37
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=99.28 E-value=5.5e-13 Score=105.23 Aligned_cols=59 Identities=24% Similarity=0.475 Sum_probs=54.3
Q ss_pred cccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccc
Q psy10137 68 IVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLAR 126 (625)
Q Consensus 68 ~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~ 126 (625)
..+++|.|..+++..|++|++|++++|+..+||++|.+|++.+|++|..+++..|+.+.
T Consensus 5 ~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~~~ 63 (65)
T 3uej_A 5 ASVGSHRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCEFIV 63 (65)
T ss_dssp EEEEECCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSEEEEEC
T ss_pred eEeCCceEEeEeCCCCCcccccChhhhccCceeeECCCCCCeEchhHhhhCCCcCCCcc
Confidence 45789999999999999999999998888899999999999999999999999997553
No 38
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.2e-12 Score=105.80 Aligned_cols=58 Identities=19% Similarity=0.500 Sum_probs=53.0
Q ss_pred cccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccc-ccccc
Q psy10137 68 IVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMG-ECGLA 125 (625)
Q Consensus 68 ~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~-~C~~~ 125 (625)
....+|.|..++|..||+|++|++++|+.++||++|++|++.||++|..+++. .|...
T Consensus 13 ~~~~~H~F~~~~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~v~~~~C~~~ 71 (74)
T 2db6_A 13 VNDKPHKFKDHFFKKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSYVEMQRCSGP 71 (74)
T ss_dssp SCSSBCCEEEEECSSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGGGSSSBCCCC
T ss_pred ccCCCCceEEeeCCCCcCchhcChhhccccCCccccCCCCCccChhHHhhCCCCcCCCC
Confidence 35689999999999999999999998887899999999999999999999986 58754
No 39
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=99.26 E-value=1.2e-12 Score=103.50 Aligned_cols=56 Identities=27% Similarity=0.536 Sum_probs=49.5
Q ss_pred ccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGL 124 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~ 124 (625)
...+|.|..++|..||+|++|++++|+..+||++|.+|+++||++|..+++..|.+
T Consensus 10 ~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~v~~~C~~ 65 (66)
T 1y8f_A 10 GGIQHNFEVWTATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDLLNADCKL 65 (66)
T ss_dssp ---CCCEEEEECSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHHSCCCC--
T ss_pred CCCCcccEeeeCCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhhCcCcCCC
Confidence 35789999999999999999999988878999999999999999999999999964
No 40
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=3.4e-12 Score=106.13 Aligned_cols=59 Identities=24% Similarity=0.532 Sum_probs=54.5
Q ss_pred cccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccc
Q psy10137 68 IVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLAR 126 (625)
Q Consensus 68 ~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~ 126 (625)
....+|.|..++|..||+|++|++++|+..+||++|.+|++.||++|..+++..|+...
T Consensus 13 ~~~~~H~F~~~~~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~v~~~C~~~~ 71 (85)
T 2eli_A 13 DPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVINVPSLCGMDH 71 (85)
T ss_dssp CTTTSCCCEEECCSSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTTSCSCCCCCC
T ss_pred CCCCCcccEeeeCCCCcCCcccCccccccccCCCcCCCcCCccCHhHHhhcCCcCCcch
Confidence 34679999999999999999999998888899999999999999999999999998654
No 41
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=99.24 E-value=1.8e-12 Score=96.70 Aligned_cols=50 Identities=28% Similarity=0.616 Sum_probs=47.5
Q ss_pred CeeceeEeccCCcccccccccccccccccccccccccccccccccccccc
Q psy10137 73 HELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGEC 122 (625)
Q Consensus 73 H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C 122 (625)
|.|..+++..||+|++|++++||..+||++|++|++++|++|..+++..|
T Consensus 1 H~F~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C 50 (50)
T 1ptq_A 1 HRFKVYNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLC 50 (50)
T ss_dssp CCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHTTSCSCC
T ss_pred CCCEeecCCCCCCcCCCCceeeccCCccCEeCCCCCeECHHHhhhcCCCC
Confidence 89999999999999999999888789999999999999999999998876
No 42
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=99.18 E-value=4.3e-12 Score=97.79 Aligned_cols=52 Identities=29% Similarity=0.682 Sum_probs=48.3
Q ss_pred ccCCCeece-eEeccCCccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELES-KIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECG 123 (625)
Q Consensus 69 ~~~~H~F~~-~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~ 123 (625)
...||.|.. +++..||+|++|++++ ++||++|++|+++||++|..+++..|+
T Consensus 7 ~~~~H~F~~~~~~~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~~v~~~C~ 59 (59)
T 1rfh_A 7 RGEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 59 (59)
T ss_dssp CCSSCCCEECCCSSCCEECTTTCSEE---CSCCEECTTTSCEECHHHHTTCCCCCC
T ss_pred CCCCCcCeeeeccCCCeEchhcchhh---hhCccEeCCCCCeEehhhhhhCcCCCC
Confidence 357999999 9999999999999987 489999999999999999999999884
No 43
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=99.17 E-value=1e-11 Score=99.57 Aligned_cols=51 Identities=29% Similarity=0.708 Sum_probs=47.8
Q ss_pred cCCCeece-eEeccCCccccccccccccccccccccccccccccccccccccccc
Q psy10137 70 YLGHELES-KIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECG 123 (625)
Q Consensus 70 ~~~H~F~~-~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~ 123 (625)
..||.|.. +++..||+|++|++++ ++||++|.+|+++||++|..+++..|.
T Consensus 21 ~~~H~F~~~~~~~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~~V~~~C~ 72 (72)
T 2fnf_X 21 GEGHRFVELALRGGPGWCDLCGREV---LRQALRCANCKFTCHSECRSLIQLDCR 72 (72)
T ss_dssp CSSCCCEECCCCSSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGGGCCSCCC
T ss_pred CCCCccceeecCCCCcchhhhhHHH---HhCcCccCCCCCeechhhhccCcCCCC
Confidence 47999999 9999999999999987 589999999999999999999999884
No 44
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=99.17 E-value=9.1e-12 Score=93.65 Aligned_cols=51 Identities=24% Similarity=0.497 Sum_probs=47.3
Q ss_pred cCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccc
Q psy10137 70 YLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGL 124 (625)
Q Consensus 70 ~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~ 124 (625)
+++|.|..++|..||+|++|++++| ||++|++|++.+|++|..+++..|++
T Consensus 1 ~~~H~F~~~~~~~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~v~~~C~~ 51 (52)
T 1faq_A 1 LTTHNFARKTFLKLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTKVPTMCVD 51 (52)
T ss_dssp CCCCCCEEECCSSCEECTTSSSEEC----SEEECTTTTCCBCSTTSSSSSSCCCC
T ss_pred CCCceeEeEeCCCCcCCCCcccccc----cCCEeCCCCCeEChhHHhhCcCcCCC
Confidence 3689999999999999999999865 89999999999999999999999964
No 45
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=99.10 E-value=3.2e-11 Score=93.12 Aligned_cols=56 Identities=27% Similarity=0.431 Sum_probs=50.5
Q ss_pred ccCCCeeceeEeccCCccccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLA 125 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~ 125 (625)
..++|+|..+++..|++|++|++.++ ..+||++|.+|++.||++|...++.+|.+.
T Consensus 5 ~~~~H~F~~kt~~~~~~C~~Cg~~i~-~gkq~~kC~dC~~~cH~~C~~~~~~~C~p~ 60 (61)
T 4b6d_A 5 SMRLHDFVSKTVIKPESCVPCGKRIK-FGKLSLKCRDCRVVSHPECRDRCPLPCIPT 60 (61)
T ss_dssp CBCCCCEEEEECCSCEECTTTCCEEC-TTCEEEEESSSSCEECGGGGGGSCSSCCCC
T ss_pred cccceeEEeeeccCCcccccccCEEE-EeeEeeECCCCCCeEchhHhhcCCCCCCCC
Confidence 35789999999999999999999754 568999999999999999999999999753
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.76 E-value=8.3e-10 Score=126.57 Aligned_cols=59 Identities=20% Similarity=0.383 Sum_probs=0.0
Q ss_pred ccccCCCeeceeEeccCCccccccccccccccccccccccccccccccccccccccccc
Q psy10137 67 RIVYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLA 125 (625)
Q Consensus 67 ~~~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~ 125 (625)
.+..+||.|..++|..||+|++|+.++||..+||++|..|+++||++|..+++..|...
T Consensus 32 ~~~~~~H~f~~~~~~~p~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C~~~v~~~c~~~ 90 (674)
T 3pfq_A 32 VHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVCSFVVHKRCHEFVTFSCPGA 90 (674)
T ss_dssp -----------------------------------------------------------
T ss_pred CcccCCceEEeeeCCCCCccccccccccccCCceeECCCCCCCcChhhcCcCcccCCCc
Confidence 45578999999999999999999999998899999999999999999999999999654
No 47
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=98.75 E-value=2.9e-09 Score=78.04 Aligned_cols=45 Identities=24% Similarity=0.619 Sum_probs=39.9
Q ss_pred CCCeeceeEeccCCcccccccccccccccccccccccccccccccccccc
Q psy10137 71 LGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMG 120 (625)
Q Consensus 71 ~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~ 120 (625)
.+|.|..+++. +|+|++|++.|| +|++|.+|++.||++|..+++.
T Consensus 3 i~HrF~~~t~~-~t~C~~C~k~i~----~G~kC~~Ck~~cH~kC~~~vp~ 47 (49)
T 1kbe_A 3 VTHRFSTKSWL-SQVCNVCQKSMI----FGVKCKHCRLKCHNKCTKEAPA 47 (49)
T ss_dssp CCCCEEEECCS-SCCCSSSCCSSC----CEEEETTTTEEESSSCTTTSCC
T ss_pred CCcccCccCCC-CcCccccCceeE----CcCCCCCCCCccchhhcCcCCC
Confidence 57999999987 699999999875 5799999999999999997654
No 48
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=98.46 E-value=4.9e-08 Score=110.04 Aligned_cols=57 Identities=25% Similarity=0.600 Sum_probs=50.0
Q ss_pred ccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLAR 126 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~ 126 (625)
..+||.|..+++..||+|++|++++||...||++|..|++.||++|...+ ..|+...
T Consensus 515 ~~~~H~F~~~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~v-~~C~~~~ 571 (587)
T 3ky9_A 515 TANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGRV-PPCGRHG 571 (587)
T ss_dssp TGGGCCEEEECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGGS-CCC----
T ss_pred cccCCceeEEeCCCCcccccccccccccccCCcCCCCCCCccchhhhhcC-CCCCCCC
Confidence 45799999999999999999999988889999999999999999999999 4887553
No 49
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=98.34 E-value=1.5e-07 Score=101.14 Aligned_cols=57 Identities=25% Similarity=0.564 Sum_probs=50.2
Q ss_pred ccCCCeeceeEeccCCcccccccccccccccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLAR 126 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~~ 126 (625)
...||.|..+++..||+|.+|++++||..+||+.|..|++++|++|..+++. |+...
T Consensus 343 ~~~~h~f~~~~~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~~~~~-C~~~~ 399 (406)
T 2vrw_B 343 TANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLGRVPP-CGRHG 399 (406)
T ss_dssp TGGGCCEEEECCSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGGGSCC-C----
T ss_pred cCCCCCCccccCCCCCCCccccchhceeCCCCCCCCCCcCccchhhhhhCCC-CCCCc
Confidence 4679999999999999999999998888899999999999999999999995 97553
No 50
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=97.84 E-value=6.5e-06 Score=94.22 Aligned_cols=56 Identities=25% Similarity=0.567 Sum_probs=51.1
Q ss_pred cCCCeeceeEeccCCccccccccccccccccccccccccccccccccccccccccc
Q psy10137 70 YLGHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRIMGECGLA 125 (625)
Q Consensus 70 ~~~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i~~~C~~~ 125 (625)
...|.|..+++..|++|++|+++++++..||++|..|++.+|++|...++..|+..
T Consensus 100 ~~~h~~~~~~~~~~~~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~~v~~~C~~d 155 (674)
T 3pfq_A 100 RSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVHKRCVMNVPSLCGTD 155 (674)
T ss_dssp --CCCCCEECCSSCCCCSSSCSCCBBSSSCEECCSSSCCCBCSSTTSSSCCCSSSC
T ss_pred cCCcceeecCCCCCCCCCccccccchhhcCccccccCCcchhhhhhhccCcccccc
Confidence 35899999999999999999999888889999999999999999999999999643
No 51
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=96.07 E-value=0.0026 Score=51.88 Aligned_cols=57 Identities=14% Similarity=0.390 Sum_probs=47.9
Q ss_pred ccCCCeeceeEeccCCcccccccccccc-ccccccccccccccccccccccccccccc
Q psy10137 69 VYLGHELESKIINIPTACEICNSLFKWP-IERMLVCQNCRHTCHRKCYTRIMGECGLA 125 (625)
Q Consensus 69 ~~~~H~F~~~~~~~pt~C~~C~~~i~~~-~~qg~~C~~C~~~~HkkC~~~i~~~C~~~ 125 (625)
....|.|..-.+..+++|.+|.+.++.. .-+|++|.=|++++|.+|+..++..|...
T Consensus 24 ~~~~H~WveGNl~~~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~~~~eC~lG 81 (84)
T 1r79_A 24 IAMPHQWLEGNLPVSAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKESLLTKCSGP 81 (84)
T ss_dssp CCBCCCEEESCCCTTCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHHCCSCBCCS
T ss_pred ccceeeEEccCCCCCCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHhccCcCCCC
Confidence 3567999999888889999999976542 23789999999999999999999988643
No 52
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=72.84 E-value=1.6 Score=35.80 Aligned_cols=43 Identities=26% Similarity=0.437 Sum_probs=32.2
Q ss_pred CCeeceeEeccCCcccccccccccccccccccccccccccccccccc
Q psy10137 72 GHELESKIINIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRI 118 (625)
Q Consensus 72 ~H~F~~~~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i 118 (625)
.|....... .+-+|+.|+.... ...|.|..|.+..|..|...-
T Consensus 37 ~H~L~L~~~-~~~~C~~C~~~~~---~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 37 EHELELTRV-QVYTCDKCEEEGT---IWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp TSCEEEECC-SSCCCTTTSCCCC---SCEEECTTTCCCCCHHHHHCS
T ss_pred CCccEEeeC-CCeEeCCCCCcCC---CcEEEcCCCCCeEcHHhcCCC
Confidence 466665443 3789999998633 246999999999999998754
No 53
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=42.50 E-value=7.5 Score=37.81 Aligned_cols=33 Identities=27% Similarity=0.651 Sum_probs=28.3
Q ss_pred cCCcccccccccccccccccccccccccccccccccc
Q psy10137 82 IPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRI 118 (625)
Q Consensus 82 ~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i 118 (625)
....|..|.+.+. +|.+|..|+...|..|..+.
T Consensus 179 ~i~~C~iC~~iv~----~g~~C~~C~~~~H~~C~~~~ 211 (238)
T 3nw0_A 179 AVKICNICHSLLI----QGQSCETCGIRMHLPCVAKY 211 (238)
T ss_dssp TCCBCTTTCSBCS----SCEECSSSCCEECHHHHHHH
T ss_pred CCCcCcchhhHHh----CCcccCccChHHHHHHHHHH
Confidence 4678999999754 58999999999999999775
No 54
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.87 E-value=13 Score=29.11 Aligned_cols=35 Identities=26% Similarity=0.610 Sum_probs=28.7
Q ss_pred eccCCcccccccccccccccccccccccccccccccccc
Q psy10137 80 INIPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRI 118 (625)
Q Consensus 80 ~~~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i 118 (625)
......|..|...+. ++.+|..|+...|..|..+.
T Consensus 12 ~~~i~~C~IC~~~i~----~g~~C~~C~h~fH~~Ci~kW 46 (74)
T 2ct0_A 12 PDAVKICNICHSLLI----QGQSCETCGIRMHLPCVAKY 46 (74)
T ss_dssp SSSSCBCSSSCCBCS----SSEECSSSCCEECHHHHHHH
T ss_pred cCCCCcCcchhhHcc----cCCccCCCCchhhHHHHHHH
Confidence 345578999999754 57899999999999999865
No 55
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.11 E-value=18 Score=28.38 Aligned_cols=34 Identities=21% Similarity=0.569 Sum_probs=26.9
Q ss_pred Cccccccccccccccccccccccccccccccccc
Q psy10137 84 TACEICNSLFKWPIERMLVCQNCRHTCHRKCYTR 117 (625)
Q Consensus 84 t~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~ 117 (625)
-.|..|+.-+......|..|.+|+..+=++|...
T Consensus 26 r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~Crv~ 59 (76)
T 2csz_A 26 RTCARCQESLGRLSPKTNTCRGCNHLVCRDCRIQ 59 (76)
T ss_dssp CBCSSSCCBCSSSCTTTSEETTTTEECCTTSEEE
T ss_pred cchhhhCccccccccCCCcCcccChhhccccccc
Confidence 4699999987777789999999996665666543
No 56
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=27.31 E-value=17 Score=29.07 Aligned_cols=33 Identities=24% Similarity=0.756 Sum_probs=26.0
Q ss_pred CCcccccccccccccccccccccccccccccccccc
Q psy10137 83 PTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRI 118 (625)
Q Consensus 83 pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i 118 (625)
-..|++|..+- ...-+.|..|..++|..|..+.
T Consensus 15 D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 15 DEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp SCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHH
T ss_pred CcccCcccccc---ccceeccccccccccHhhcccc
Confidence 35699998742 3445889999999999999876
No 57
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=27.20 E-value=26 Score=31.45 Aligned_cols=35 Identities=17% Similarity=0.435 Sum_probs=27.8
Q ss_pred cCCcccccccccccccccccccccccccccccccc
Q psy10137 82 IPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYT 116 (625)
Q Consensus 82 ~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~ 116 (625)
....|..|..-+.+....|..|.+|+..+=++|..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~ 101 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH 101 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc
Confidence 35789999997777778899999999666566664
No 58
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=24.69 E-value=30 Score=30.39 Aligned_cols=37 Identities=19% Similarity=0.469 Sum_probs=28.3
Q ss_pred cCCcccccccccccccccccccccccccccccccccc
Q psy10137 82 IPTACEICNSLFKWPIERMLVCQNCRHTCHRKCYTRI 118 (625)
Q Consensus 82 ~pt~C~~C~~~i~~~~~qg~~C~~C~~~~HkkC~~~i 118 (625)
.-..|..|.+-+.+....|-.|.+|+..+=++|...+
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~ 90 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVET 90 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEEC
T ss_pred CCccccccCCCcccccCCCCCCCCCCcccccccCCcc
Confidence 4577999999765556778999999976666776655
No 59
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=23.17 E-value=38 Score=28.29 Aligned_cols=30 Identities=27% Similarity=0.640 Sum_probs=19.2
Q ss_pred EeccCCcccccccccccccccccccccccc
Q psy10137 79 IINIPTACEICNSLFKWPIERMLVCQNCRH 108 (625)
Q Consensus 79 ~~~~pt~C~~C~~~i~~~~~qg~~C~~C~~ 108 (625)
-.-.|-.|..||..|.-.+....+|..|+.
T Consensus 63 L~v~p~~C~~CG~~F~~~~~kPsrCP~CkS 92 (105)
T 2gmg_A 63 LLIKPAQCRKCGFVFKAEINIPSRCPKCKS 92 (105)
T ss_dssp EEECCCBBTTTCCBCCCCSSCCSSCSSSCC
T ss_pred EEEECcChhhCcCeecccCCCCCCCcCCCC
Confidence 345677888888865333345577887774
No 60
>1ccd_A Clara cell 17 KD protein; phospholipase A2 inhibitor; 3.00A {Rattus rattus} SCOP: a.101.1.1
Probab=21.67 E-value=1.6e+02 Score=22.97 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=33.7
Q ss_pred ChhhHHHHHHHhcCch---HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy10137 225 TFEYYEEFLRAADLTE---DRVSTLFSILKTLPKPNFDLMERLIFHLARVA 272 (625)
Q Consensus 225 ~~~~y~~~l~~~~~~~---~~~~~l~~~l~~LP~~n~~~L~~L~~hL~~V~ 272 (625)
+.+.|...+.-...++ +....+++.+.+|+..++..+.- ++.+|.
T Consensus 19 s~~~Y~~~l~~y~~~~~a~eA~~~lK~C~D~ls~e~r~~i~~---~l~kI~ 66 (77)
T 1ccd_A 19 SESNYEAALKPFNPASDLQNAGTQLKRLVDTLPQETRINIVK---LTEKIL 66 (77)
T ss_dssp CHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHSCHHHHHHHHH---HHHHHT
T ss_pred CHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHH---HHHHHH
Confidence 7788888888877666 66778999999999988865543 344444
No 61
>3l32_A Phosphoprotein; antiparallel alpha-helices, viral protein, dimerisation domain; 1.50A {Rabies virus}
Probab=20.06 E-value=34 Score=23.66 Aligned_cols=9 Identities=11% Similarity=0.696 Sum_probs=7.2
Q ss_pred hhhhhHHHH
Q psy10137 22 AFRGFMNEF 30 (625)
Q Consensus 22 ~f~~~l~~f 30 (625)
.||+||||-
T Consensus 4 pfQs~LD~v 12 (45)
T 3l32_A 4 LFQSYLDNV 12 (45)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 589999974
Done!