BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10138
(183 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189242036|ref|XP_967115.2| PREDICTED: similar to AGAP004795-PA [Tribolium castaneum]
Length = 597
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 55/173 (31%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
+ +S+S F P Y +YTTI D +QRRR+K DF+ Y EY+ LH +E V+ RF L
Sbjct: 472 GAVAKVDSSSEF-PDYLTEYTTIKDADQRRRFKADFNADYAEYKDLHGIVEKVSRRFVDL 530
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
+ +L++E + + RF L+ Q
Sbjct: 531 ELKLKQE-------------------------------------DASSPRFKDLKKQ--- 550
Query: 126 ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
IVREY+ENK D + + +RRF+YLH+KLSHIK+LV YD
Sbjct: 551 --------------IVREYNENKNDLEHQKLKRRFQYLHDKLSHIKRLVLEYD 589
>gi|270015918|gb|EFA12366.1| hypothetical protein TcasGA2_TC002072 [Tribolium castaneum]
Length = 632
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 82/173 (47%), Gaps = 55/173 (31%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
+ +S+S F P Y +YTTI D +QRRR+K DF+ Y EY+ LH +E V+ RF L
Sbjct: 507 GAVAKVDSSSEF-PDYLTEYTTIKDADQRRRFKADFNADYAEYKDLHGIVEKVSRRFVDL 565
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
+ +L++E + + RF L+ Q
Sbjct: 566 ELKLKQE-------------------------------------DASSPRFKDLKKQ--- 585
Query: 126 ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
IVREY+ENK D + + +RRF+YLH+KLSHIK+LV YD
Sbjct: 586 --------------IVREYNENKNDLEHQKLKRRFQYLHDKLSHIKRLVLEYD 624
>gi|427784071|gb|JAA57487.1| Putative rna polymerase ii elongation factor ell [Rhipicephalus
pulchellus]
Length = 525
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 55/174 (31%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
AT S NST+ +P+Y YT I EQR RYK DF+ Y+EY+ LH+ IE+V+ RF L
Sbjct: 399 ATPSPRNSTNQ-VPEYVTKYTEITSEEQRGRYKADFNAEYEEYKALHSTIESVSKRFTDL 457
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
++ LR GS ++ ++ Q+ R
Sbjct: 458 EDCLRTAREGS-------------------------------------EQWNRVKQQIVR 480
Query: 126 ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDS 179
E Y E+K D++++ RR+F+YLH+KL+HIK+LV YDS
Sbjct: 481 E-----------------YEESKRDQRYQQARRKFQYLHDKLAHIKRLVMDYDS 517
>gi|47215192|emb|CAG01399.1| unnamed protein product [Tetraodon nigroviridis]
Length = 672
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 48/175 (27%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
F+T ST P Y Y +V +QR+ YK+DF+ Y EY++LHA++E+V RF+
Sbjct: 538 FSTNST--------PDYVVKYLPLVSGDQRQSYKDDFNAEYDEYRLLHARVESVTRRFSQ 589
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L Q R+ PG+ H+ R C F
Sbjct: 590 LDAQCRKLVPGTKEHQVADR-----------CSF-------------------------- 612
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRK-FEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P +F ++Q+ +++EY + K D + ++R EYLHNKL+HIK+L+ +D
Sbjct: 613 --SPSAFTSLKMQEEVLKEYKKMKQDSPNYHVEKQRCEYLHNKLAHIKRLIADFD 665
>gi|383855598|ref|XP_003703297.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Megachile
rotundata]
Length = 754
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 54/168 (32%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
S+ P Y YTTI EQRRRYK +F+ Y+EY+ LH ++ V+ RFA LQ +L++E
Sbjct: 612 SSEYPDYLTYYTTISSAEQRRRYKAEFNADYEEYRRLHTQVAKVSKRFAQLQERLKQE-- 669
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSF-AH 133
ET G++ +
Sbjct: 670 ---------------------------------------------------ETSGNWDEY 678
Query: 134 KQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
++I+ I+ EY+E K D ++ +RRF YLH KLSHIK+LV YD+ N
Sbjct: 679 EEIRRQILHEYNETKRDPVHKETKRRFHYLHEKLSHIKRLVLEYDTQN 726
>gi|340714745|ref|XP_003395885.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bombus
terrestris]
Length = 746
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 52/161 (32%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YTTI +EQRRRYK +F+ Y+EYQ LH ++ V+ RF LQ++L++E
Sbjct: 611 PDYLTYYTTISSMEQRRRYKEEFNADYEEYQRLHTQVAKVSIRFTELQDRLKQE------ 664
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
+A G E +++I+
Sbjct: 665 -EALGNWDE---------------------------------------------YQEIKQ 678
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDS 179
I EY+E K D K ++ + RF YLH KLSHIK+LV YD+
Sbjct: 679 QIFDEYNETKNDPKHKETKHRFHYLHEKLSHIKRLVLEYDA 719
>gi|328784149|ref|XP_393419.3| PREDICTED: RNA polymerase II elongation factor ELL-like [Apis
mellifera]
Length = 752
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 52/167 (31%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
S+ P Y YTTI EQRRRYK +F+ Y+EY+ LHA++ V+ RF LQ +L++E
Sbjct: 613 SSEYPDYLTYYTTISSSEQRRRYKAEFNADYEEYRRLHAQVANVSKRFTQLQERLKQE-- 670
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHK 134
+A G E ++
Sbjct: 671 -----EASGNWEE---------------------------------------------YE 680
Query: 135 QIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+++ I+ +Y+E K D ++ +RRF YLH KLSHIK+LV YD+ N
Sbjct: 681 EVRRQILHDYNETKRDPVHKEIKRRFHYLHEKLSHIKRLVLEYDTQN 727
>gi|380020092|ref|XP_003693930.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like [Apis florea]
Length = 751
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 78/167 (46%), Gaps = 52/167 (31%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
S+ P Y YTTI EQRRRYK +F+ Y+EY+ LHA++ V+ RF LQ +L++E
Sbjct: 612 SSEYPDYLTYYTTISSSEQRRRYKAEFNADYEEYRRLHAQVANVSKRFTQLQERLKQE-- 669
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHK 134
+A G E ++
Sbjct: 670 -----EASGNWEE---------------------------------------------YE 679
Query: 135 QIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+++ I+ +Y+E K D ++ +RRF YLH KLSHIK+LV YD+ N
Sbjct: 680 EVRRQILHDYNETKRDPVHKEXKRRFHYLHEKLSHIKRLVLEYDTQN 726
>gi|321470782|gb|EFX81757.1| hypothetical protein DAPPUDRAFT_317377 [Daphnia pulex]
Length = 140
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 80/176 (45%), Gaps = 56/176 (31%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G + ++T T + Y Y TIV EQR RYK DF+ Y EY+ L
Sbjct: 15 GLSASTTPTETDS--EPYTLQYRTIVSGEQRSRYKEDFNSQYNEYRNL------------ 60
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
HKA I+ V+ RF+ L+ +L
Sbjct: 61 ---------------HKA---------------------------IDKVSKRFSHLEEEL 78
Query: 124 RRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDS 179
R++ G+ A ++I+ IVREY EN D K+ + +RRF +LH KL+HIK+LV +D+
Sbjct: 79 RQQDEGTSAWQRIKSQIVREYKENLRDAKYREAKRRFHHLHEKLAHIKRLVLEWDT 134
>gi|410921254|ref|XP_003974098.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 625
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 55/173 (31%)
Query: 12 NSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+S+S + +Y YT I EQR+RYKNDF+ Y EY+ LHA+IE + F L N+L+
Sbjct: 506 SSSSPVVAEYLLKYTVISSPEQRQRYKNDFNAEYSEYRGLHARIECITRHFTVLDNELK- 564
Query: 72 ETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSF 131
+++ ++ ++ NQ
Sbjct: 565 ------------------------------------QLQQGTDKYKTVNNQ--------- 579
Query: 132 AHKQIQDTIVREYHENK-TDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
I++EYH+ K T+ + + R EYLHNKLSHIKKL+ YD L+
Sbjct: 580 --------IIKEYHKIKETNPNYSQDKNRCEYLHNKLSHIKKLIATYDQQQLQ 624
>gi|241176299|ref|XP_002399526.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495153|gb|EEC04794.1| conserved hypothetical protein [Ixodes scapularis]
Length = 299
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 54/160 (33%)
Query: 23 KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQ 82
+ Y I + EQR RYK DF+ Y+EY+ LH+ +E V+ RF+ L++ LR GS
Sbjct: 189 RKYVEITNQEQRGRYKADFNAEYEEYKTLHSTVEQVSRRFSDLEDSLRNSREGS------ 242
Query: 83 GRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVR 142
++ ++ Q+ R
Sbjct: 243 -------------------------------DQWNRIKQQIMR----------------- 254
Query: 143 EYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
EY ENK D++++ RR+F+YLH+KL+HIK+LV YDS L
Sbjct: 255 EYEENKRDQRYQQTRRKFQYLHDKLAHIKRLVVDYDSRAL 294
>gi|349603613|gb|AEP99406.1| RNA polymerase II elongation factor ELL2-like protein, partial
[Equus caballus]
Length = 135
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 4 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 62
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS + + V
Sbjct: 63 RFIKLDAQRKRLSPGS------------------------------KEYQNVHEEVLQEY 92
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 93 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 127
>gi|432854415|ref|XP_004067890.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Oryzias
latipes]
Length = 623
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 55/180 (30%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S +S+ P + Y+ I EQR+RYKNDF+ Y EY+ LHA+IE + +F
Sbjct: 498 GVCDRSGVPPSSSQTPDFLLKYSEIRSPEQRQRYKNDFNAEYSEYRALHARIEGITRQFT 557
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L NQL+R ++ ++ ++ NQ
Sbjct: 558 VLDNQLKR-------------------------------------LQQGTEQYKTIHNQ- 579
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
I++EYH+ KT+ + + R EYLHNKL+HIKKL+ +D L
Sbjct: 580 ----------------ILQEYHKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEFDQQQL 623
>gi|334325737|ref|XP_001364314.2| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Monodelphis domestica]
Length = 647
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 53/174 (30%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHAK+ETVA RF
Sbjct: 519 VCTASTDPSSTIELPDYLIKYIAIVSHEQRQNYKDDFNAEYDEYRTLHAKMETVARRFIK 578
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L Q +R +PGS + +T+ ++
Sbjct: 579 LDAQRKRLSPGSKEY------------------------------QTIHEEVLEEYKKIN 608
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 609 QSSPN--------------YHEEK---------YRCEYLHNKLAHIKRLIGEFD 639
>gi|345325610|ref|XP_001512162.2| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ornithorhynchus anatinus]
Length = 627
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 79/174 (45%), Gaps = 53/174 (30%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
+ ST S++ LP Y Y IV EQR+ YKNDF+ Y EY+ LHA++ETVA RF
Sbjct: 499 VCSASTDPSSTIELPDYLMKYIAIVSYEQRQTYKNDFNAEYDEYRKLHARMETVARRFIK 558
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L Q +R +PG+ + ++ H E V + +++
Sbjct: 559 LDAQRKRLSPGTKEY-------QIVH-------------------EEVLQEY----RKIK 588
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 589 QSSPN--------------YHEEK---------YRCEYLHNKLAHIKRLIGEFD 619
>gi|73952028|ref|XP_546016.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1
[Canis lupus familiaris]
Length = 641
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 510 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 568
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 569 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 598
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 599 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 633
>gi|47208953|emb|CAF92244.1| unnamed protein product [Tetraodon nigroviridis]
Length = 653
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 55/173 (31%)
Query: 12 NSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+S+S +Y Y+ I EQR+RYKNDF+ Y EY+ LHA+IE + F L N+L+
Sbjct: 534 SSSSPEAAEYLSKYSVISSPEQRQRYKNDFNAEYSEYRGLHARIECITRHFTVLDNELK- 592
Query: 72 ETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSF 131
+++ ++ ++ NQ
Sbjct: 593 ------------------------------------QLQQGTDKYKTVHNQ--------- 607
Query: 132 AHKQIQDTIVREYHENK-TDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
I++EYH+ K T+ + + R EYLHNKLSHIK+L+ YD L+
Sbjct: 608 --------IIKEYHKIKETNPNYSQDKNRCEYLHNKLSHIKRLIAAYDQQQLQ 652
>gi|344265401|ref|XP_003404773.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Loxodonta
africana]
Length = 657
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 524 VKEG-CTVSTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 582
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 583 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 612
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 613 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 647
>gi|350580940|ref|XP_003123844.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1 [Sus
scrofa]
Length = 640
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 509 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 567
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 568 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 597
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 598 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|281346301|gb|EFB21885.1| hypothetical protein PANDA_017751 [Ailuropoda melanoleuca]
Length = 575
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 445 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 503
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 504 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 533
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 534 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 568
>gi|431907914|gb|ELK11521.1| RNA polymerase II elongation factor ELL2 [Pteropus alecto]
Length = 641
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 510 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 568
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 569 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 598
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 599 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 633
>gi|301784983|ref|XP_002927908.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ailuropoda melanoleuca]
Length = 578
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 447 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 505
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 506 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 535
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 536 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 570
>gi|194220055|ref|XP_001918212.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Equus
caballus]
Length = 579
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 448 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 506
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 507 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 536
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 537 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 571
>gi|296485037|tpg|DAA27152.1| TPA: elongation factor, RNA polymerase II, 2 [Bos taurus]
Length = 642
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 516 TASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 575
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 576 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 605
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 606 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 634
>gi|410948988|ref|XP_004001557.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2 [Felis catus]
Length = 642
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 511 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 569
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 570 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 599
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 600 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 634
>gi|348587458|ref|XP_003479485.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Cavia
porcellus]
Length = 642
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G+ T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 511 VKEGY-TASVEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 569
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS + + V
Sbjct: 570 RFIKLDAQRKRLSPGS------------------------------KEYQNVHEEVLQEY 599
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 600 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 634
>gi|329755297|ref|NP_001178075.1| RNA polymerase II elongation factor ELL2 [Bos taurus]
Length = 642
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 516 TASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 575
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 576 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 605
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 606 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 634
>gi|440903168|gb|ELR53864.1| RNA polymerase II elongation factor ELL2, partial [Bos grunniens
mutus]
Length = 591
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 465 TASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 524
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 525 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 554
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 555 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 583
>gi|426231162|ref|XP_004009609.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Ovis aries]
Length = 711
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 585 TASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 644
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 645 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 674
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 675 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 703
>gi|348527690|ref|XP_003451352.1| PREDICTED: RNA polymerase II elongation factor ELL [Oreochromis
niloticus]
Length = 622
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 55/180 (30%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G +++ S+S + Y YT I EQR+RYKNDF+ Y EY+ LHA+IE + +F
Sbjct: 497 GMCNSTSIPSSSPEVADYLLKYTVISSPEQRQRYKNDFNAEYSEYRGLHARIEGITRQFT 556
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L N+L+ +L H ++ ++ NQ
Sbjct: 557 VLDNELK----------------QLQHG---------------------TDKYKTVHNQ- 578
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
I++EY + KT+ + + R EYLHNKL+HIKKL+ YD L
Sbjct: 579 ----------------ILQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYDQQQL 622
>gi|417403577|gb|JAA48588.1| Putative rna polymerase ii elongation factor [Desmodus rotundus]
Length = 641
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 510 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 568
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
+F L Q +R +PGS ++ H E V +
Sbjct: 569 KFIKLDAQRKRLSPGSKEYQN-------IH-------------------EEVLQEY---- 598
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 599 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 633
>gi|417410468|gb|JAA51707.1| Putative rna polymerase ii elongation factor ell2 isoform 1,
partial [Desmodus rotundus]
Length = 407
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 276 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 334
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
+F L Q +R +PGS ++ H E V +
Sbjct: 335 KFIKLDAQRKRLSPGSKEYQN-------IH-------------------EEVLQEY---- 364
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 365 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 399
>gi|417411071|gb|JAA51989.1| Putative rna polymerase ii elongation factor, partial [Desmodus
rotundus]
Length = 482
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 351 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 409
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
+F L Q +R +PGS ++ H E V +
Sbjct: 410 KFIKLDAQRKRLSPGSKEYQN-------IH-------------------EEVLQEY---- 439
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 440 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 474
>gi|74183641|dbj|BAE36656.1| unnamed protein product [Mus musculus]
Length = 178
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 47 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 105
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS + + V
Sbjct: 106 RFIKLDAQRKRLSPGS------------------------------KEYQNVHEEVLQEY 135
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 136 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 170
>gi|291395028|ref|XP_002713987.1| PREDICTED: elongation factor, RNA polymerase II, 2 [Oryctolagus
cuniculus]
Length = 640
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 79/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T T ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 509 VKEG-CTAPTEPPSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 567
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 568 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 597
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIKKL+ +D
Sbjct: 598 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKKLIGDFD 632
>gi|354475689|ref|XP_003500060.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Cricetulus griseus]
Length = 700
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 569 VKEG-CTASMEPSSTIELPDYLVKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 627
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 628 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 657
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 658 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 692
>gi|444512766|gb|ELV10162.1| RNA polymerase II elongation factor ELL2 [Tupaia chinensis]
Length = 538
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++E VA
Sbjct: 407 VKEG-CTASTEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMENVAR 465
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 466 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 495
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 496 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 530
>gi|148705160|gb|EDL37107.1| mCG5549 [Mus musculus]
Length = 623
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 492 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 550
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 551 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 580
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 581 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 615
>gi|116256447|ref|NP_620403.2| RNA polymerase II elongation factor ELL2 [Mus musculus]
gi|341940492|sp|Q3UKU1.2|ELL2_MOUSE RecName: Full=RNA polymerase II elongation factor ELL2
Length = 639
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 508 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 566
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 567 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 596
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 597 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 631
>gi|293345072|ref|XP_001054852.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1
[Rattus norvegicus]
gi|293356940|ref|XP_226624.5| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 2
[Rattus norvegicus]
Length = 640
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 514 TASMEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 573
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 574 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 603
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 604 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|223462695|gb|AAI51189.1| Ell2 protein [Mus musculus]
Length = 639
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 508 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 566
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 567 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 596
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 597 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 631
>gi|348510574|ref|XP_003442820.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Oreochromis niloticus]
Length = 707
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 53/176 (30%)
Query: 3 RGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRF 62
+G ST S+ P Y YT +V L+QR+ YK+DF+ Y EY++LHA++E + RF
Sbjct: 577 KGRPVQSTEFSSKIETPDYILKYTALVSLDQRQSYKDDFNAEYDEYRLLHARVENITRRF 636
Query: 63 ASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQ 122
L +Q R+ PG+ H+ K++ E V + +
Sbjct: 637 TQLDSQCRKLAPGTKEHQ-----------KVQ---------------EEVVKEY----KK 666
Query: 123 LRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+++ +P YH+ K R EYLHNKL+HIK+L+ +D
Sbjct: 667 IKQHSPN--------------YHKEKL---------RCEYLHNKLAHIKRLIADFD 699
>gi|74219142|dbj|BAE26710.1| unnamed protein product [Mus musculus]
Length = 639
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 508 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 566
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 567 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 596
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 597 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 631
>gi|149058900|gb|EDM09907.1| elongation factor RNA polymerase II 2, isoform CRA_b [Rattus
norvegicus]
Length = 624
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 53/172 (30%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 498 TASMEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLD 557
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
Q +R +PGS ++ H E V + ++++
Sbjct: 558 AQRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQS 587
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 588 SPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 616
>gi|344242293|gb|EGV98396.1| RNA polymerase II elongation factor ELL2 [Cricetulus griseus]
Length = 507
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 376 VKEG-CTASMEPSSTIELPDYLVKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 434
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 435 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 464
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 465 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 499
>gi|211827792|gb|AAH06925.2| Ell2 protein [Mus musculus]
Length = 372
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 54/178 (30%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 241 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 299
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 300 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 329
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++++ +P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 330 QKIKQSSPN--------------YHEEK---------YRCEYLHNKLAHIKRLIGEFD 364
>gi|301607791|ref|XP_002933477.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Xenopus
(Silurana) tropicalis]
Length = 630
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 57/180 (31%)
Query: 2 KRGFATTSTSN--STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVA 59
K+G T T++ S++T LP Y YT IV EQR+ YK+DF+ Y EY+ LHA++E V
Sbjct: 497 KKGLKDTCTASDPSSTTELPDYMVKYTVIVSSEQRQSYKDDFNSEYDEYRSLHARVENVT 556
Query: 60 SRFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASL 119
+F L Q + +PGS +K
Sbjct: 557 RKFMQLDTQRKSLSPGSKEYKT-------------------------------------- 578
Query: 120 QNQLRRETPGSFAHKQIQDTIVREYHENK-TDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
H+++ ++EY + K T + + + R EYLHNKL+HIK+L+ +D
Sbjct: 579 ------------VHEEV----LQEYRKMKETSPNYYEEKYRCEYLHNKLAHIKRLIGEFD 622
>gi|403256218|ref|XP_003920787.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Saimiri
boliviensis boliviensis]
Length = 640
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMESSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 575 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|296194098|ref|XP_002744802.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Callithrix
jacchus]
Length = 640
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 75/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMESSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 575 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|351709869|gb|EHB12788.1| RNA polymerase II elongation factor ELL2, partial [Heterocephalus
glaber]
Length = 575
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 56/179 (31%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ L
Sbjct: 445 VKEG-CTASMEPSSTIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRAL--------- 494
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
HA+ME TVA RF L
Sbjct: 495 -----------------------------HARME----------------TVARRFIKLD 509
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRK-FEDCRRRFEYLHNKLSHIKKLVFIYD 178
Q +R +PGS ++ + + +++EY + K R + + + R EYLHNKL+HIK+L+ +D
Sbjct: 510 AQRKRLSPGSKEYQNVHEEVLQEYQKIKQSRPNYHEEKYRCEYLHNKLAHIKRLIGEFD 568
>gi|344283083|ref|XP_003413302.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Loxodonta
africana]
Length = 759
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 60/176 (34%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
TSTS++ P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L
Sbjct: 639 TSTSDT-----PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDA 693
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
QLR+ + GS A+ ET +
Sbjct: 694 QLRQLSQGS------------------------------AEYETTRGQ------------ 711
Query: 128 PGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
I++EY + KT+ + ++R EYLH+KL+HIK+L+ YD L
Sbjct: 712 ------------ILQEYRKIKKTNTNYSQEKQRCEYLHSKLAHIKRLIAEYDQRQL 755
>gi|395511271|ref|XP_003759884.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Sarcophilus
harrisii]
Length = 609
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 76/170 (44%), Gaps = 53/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L Q
Sbjct: 485 STDPSSTIELPDYLIKYIAIVSHEQRQNYKDDFNAEYDEYRTLHARMETVARRFIKLDAQ 544
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
+R +PGS ++ H E V + ++ + +P
Sbjct: 545 RKRLSPGSKEYQN-------IH-------------------EEVLEEYK----KINQSSP 574
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 575 N--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 601
>gi|395545599|ref|XP_003774687.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Sarcophilus harrisii]
Length = 636
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 53/170 (31%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
ST S++T P Y Y TIV EQR+ Y++DF+ Y EY+ LHA++E V+ RF
Sbjct: 508 VCPASTDPSSTTEQPDYLIKYVTIVSHEQRQNYEDDFNAEYDEYRTLHARMEAVSKRFIK 567
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L QL+R +PGS + ++ Q+
Sbjct: 568 LDVQLKRLSPGS-------------------------------------KEYQNIHEQVL 590
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLV 174
E +K+I + YHE K R EYLHNKL+HIK+L+
Sbjct: 591 EE------YKKINQS-CPSYHEEKY---------RCEYLHNKLAHIKRLI 624
>gi|307214939|gb|EFN89784.1| RNA polymerase II elongation factor ELL2 [Harpegnathos saltator]
Length = 685
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 52/177 (29%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
A S+ S+ +P Y YTTI +LEQRRRYK F Y+EY+ +HA + V+ RF+
Sbjct: 535 LALGSSMTLDSSQVPNYLTYYTTITNLEQRRRYKIAFHAHYEEYRRVHAMVAAVSQRFSQ 594
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L ++ + +G E C R + I A
Sbjct: 595 LYQRMTEQA-------TRGNSDE---------CQRLKQQIMA------------------ 620
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
EY E K D + +++F YLHNKL+HIKKLV +D+ N
Sbjct: 621 ------------------EYQEKKNDPIHLEAKKQFNYLHNKLAHIKKLVQDFDTQN 659
>gi|157112024|ref|XP_001657379.1| hypothetical protein AaeL_AAEL006021 [Aedes aegypti]
gi|108878210|gb|EAT42435.1| AAEL006021-PA [Aedes aegypti]
Length = 661
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 54/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
+ +N + + +T I +EQRR+YK +F ++EY+ LH +E V+ +FA L+
Sbjct: 532 ANTNKVKSLKDDFSDQFTRITSVEQRRKYKTEFDNDFQEYRRLHEIVERVSRKFAQLEEN 591
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
L+ E R +E R+ +Q Q
Sbjct: 592 LQHE-----------RHNE--------------------------RRYKEIQRQ------ 608
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I++EY E+ D KF++ ++RF YLHNKLSHIK LV YD
Sbjct: 609 -----------IIKEYDESIKDNKFQETKQRFNYLHNKLSHIKHLVHDYD 647
>gi|194388602|dbj|BAG60269.1| unnamed protein product [Homo sapiens]
Length = 390
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 265 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 324
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 325 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 354
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 355 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 382
>gi|31874769|emb|CAD98084.1| hypothetical protein [Homo sapiens]
Length = 309
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 73/171 (42%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 184 TASMEPSAIELPDYSIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 243
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q R RLS + + + V ++++ +
Sbjct: 244 Q------------------------------RKRLSTGSKEYQNVHEEVLQEYQKIKQSS 273
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 274 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 301
>gi|307191477|gb|EFN75009.1| RNA polymerase II elongation factor ELL [Camponotus floridanus]
Length = 541
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 72/163 (44%), Gaps = 52/163 (31%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YTTI + ++RRYK +F +Y EY+ LH+K+ +A+RF SL QL+
Sbjct: 396 PDYLTYYTTISNAIEKRRYKEEFYANYDEYRKLHSKVVVIANRFTSLYEQLQ-------- 447
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
+R S +IE + +
Sbjct: 448 --------------------EYRKSGNLTEIEIITEQMK--------------------- 466
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
REY E K D ++ ++RF YLH+KLSHIK+L+ Y+S N
Sbjct: 467 ---REYKEIKQDIVYQQMKKRFHYLHDKLSHIKRLILEYESEN 506
>gi|332022815|gb|EGI63088.1| RNA polymerase II elongation factor ELL [Acromyrmex echinatior]
Length = 528
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 53/169 (31%)
Query: 13 STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRE 72
ST ++ Y +YTTI + EQ+RRYK +F+ +Y EY+ LH+++ A+R
Sbjct: 378 STGQYV-DYRTEYTTISNPEQKRRYKEEFNANYDEYRRLHSQVLVTANR----------- 425
Query: 73 TPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFA 132
F H + LQ+Q +++
Sbjct: 426 ----FTH-----------------------------------LYTLLQDQ--KKSGNMIE 444
Query: 133 HKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
++ ++ I REY E K + ++ + RF+YLHNKLSHIK+L+ YDS N
Sbjct: 445 SEETKEQIYREYKETKQNPVYQQMKERFDYLHNKLSHIKRLILEYDSEN 493
>gi|297675689|ref|XP_002815799.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Pongo abelii]
Length = 640
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|109078054|ref|XP_001094059.1| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 2
[Macaca mulatta]
Length = 640
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|355750076|gb|EHH54414.1| RNA polymerase II elongation factor ELL2, partial [Macaca
fascicularis]
Length = 590
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 466 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 525
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 526 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 555
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 556 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 583
>gi|114599074|ref|XP_517646.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 4 [Pan
troglodytes]
gi|410226096|gb|JAA10267.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410267212|gb|JAA21572.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410301310|gb|JAA29255.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410352529|gb|JAA42868.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
Length = 640
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|397504437|ref|XP_003822802.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Pan
paniscus]
Length = 640
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|155722987|ref|NP_036213.2| RNA polymerase II elongation factor ELL2 [Homo sapiens]
gi|254763293|sp|O00472.2|ELL2_HUMAN RecName: Full=RNA polymerase II elongation factor ELL2
gi|119616466|gb|EAW96060.1| elongation factor, RNA polymerase II, 2 [Homo sapiens]
gi|261858606|dbj|BAI45825.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
Length = 640
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|355691491|gb|EHH26676.1| RNA polymerase II elongation factor ELL2, partial [Macaca mulatta]
Length = 590
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 466 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 525
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 526 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 555
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 556 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 583
>gi|62088266|dbj|BAD92580.1| elongation factor, RNA polymerase II, 2 variant [Homo sapiens]
Length = 519
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 394 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 453
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 454 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 483
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 484 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 511
>gi|1946347|gb|AAC51232.1| RNA polymerase II elongation factor ELL2 [Homo sapiens]
gi|20306682|gb|AAH28412.1| Elongation factor, RNA polymerase II, 2 [Homo sapiens]
gi|123981266|gb|ABM82462.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
gi|123996099|gb|ABM85651.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
Length = 640
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 515 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 574
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS ++ H E V + ++++ +
Sbjct: 575 QRKRLSPGSKEYQN-------VH-------------------EEVLQEY----QKIKQSS 604
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 605 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|194384546|dbj|BAG59433.1| unnamed protein product [Homo sapiens]
Length = 336
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 211 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 270
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 271 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 300
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 301 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 328
>gi|194390608|dbj|BAG62063.1| unnamed protein product [Homo sapiens]
Length = 310
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 185 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 244
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 245 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 274
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 275 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 302
>gi|90083244|dbj|BAE90704.1| unnamed protein product [Macaca fascicularis]
Length = 310
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 185 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 244
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
Q +R +PGS + + V ++++ +
Sbjct: 245 QRKRLSPGS------------------------------KEYQNVHEEVLQEYQKIKQSS 274
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 275 PN--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 302
>gi|395825652|ref|XP_003786038.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Otolemur
garnettii]
Length = 640
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 53/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
+++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L Q
Sbjct: 516 ASTEPSTIQLPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQ 575
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
+R +PGS ++ H E V + ++++ +P
Sbjct: 576 RKRLSPGSKEYQN-------VH-------------------EEVLQEY----KKIKQSSP 605
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 606 N--------------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|74181941|dbj|BAE32669.1| unnamed protein product [Mus musculus]
Length = 626
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 54/173 (31%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 508 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 566
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
RF L Q +R +PGS ++ H E V +
Sbjct: 567 RFIKLDAQRKRLSPGSKEYQN-------VH-------------------EEVLQEY---- 596
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKL 173
++++ +P YHE K R EYLHNKL+HIK+L
Sbjct: 597 QKIKQSSPN--------------YHEEKY---------RCEYLHNKLAHIKRL 626
>gi|441598525|ref|XP_004093148.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2 [Nomascus leucogenys]
Length = 640
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 72/161 (44%), Gaps = 53/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L Q +R +PGS
Sbjct: 525 LPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSK 584
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++ H E V + ++++ +P
Sbjct: 585 EYQN-------VH-------------------EEVLQEY----QKIKQSSPN-------- 606
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 607 ------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|402872128|ref|XP_003899987.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Papio
anubis]
Length = 640
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 72/161 (44%), Gaps = 53/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L Q +R +PGS
Sbjct: 525 LPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSK 584
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++ H E V + ++++ +P
Sbjct: 585 EYQN-------VH-------------------EEVLQEY----QKIKQSSPN-------- 606
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K R EYLHNKL+HIK+L+ +D
Sbjct: 607 ------YHEEKY---------RCEYLHNKLAHIKRLIGEFD 632
>gi|323650040|gb|ADX97106.1| elongation factor RNA polymerase II 2 [Perca flavescens]
Length = 130
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 53/173 (30%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
ST S++ +P Y Y +V ++QR+ YKNDF+ Y EY++LHA++E + RF L
Sbjct: 4 PVQSTEFSSTIEIPDYVVKYMPMVSMDQRQSYKNDFNAEYDEYRLLHARVENITRRFTQL 63
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
+ R+ PG+ + + V ++++
Sbjct: 64 DAKCRKLAPGT------------------------------KEYQKVQEEVLKEYKKMKQ 93
Query: 126 ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+P YHE K +R EYLHNKL+HIK+L+ +D
Sbjct: 94 HSPN--------------YHEEK---------QRCEYLHNKLAHIKRLIADFD 123
>gi|326934550|ref|XP_003213351.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Meleagris
gallopavo]
Length = 709
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 55/176 (31%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 584 GTCNNSSVPTSTSDMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFT 643
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L ++L++ GS +K
Sbjct: 644 QLDSKLKQLLQGSEEYKT------------------------------------------ 661
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
H QI ++EY + KT+ + + R EYLHNKL+HIKKL+ YD
Sbjct: 662 --------IHDQI----LQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYD 705
>gi|61098133|ref|NP_001012865.1| RNA polymerase II elongation factor ELL [Gallus gallus]
gi|53128622|emb|CAG31318.1| hypothetical protein RCJMB04_5a13 [Gallus gallus]
Length = 610
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 55/176 (31%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 485 GTCNNSSVPTSTSDMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFT 544
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L ++L++ GS +K
Sbjct: 545 QLDSKLKQLLQGSEEYKT------------------------------------------ 562
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
H QI ++EY + KT+ + + R EYLHNKL+HIKKL+ YD
Sbjct: 563 --------IHDQI----LQEYRKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYD 606
>gi|322797009|gb|EFZ19323.1| hypothetical protein SINV_03092 [Solenopsis invicta]
Length = 657
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 54/159 (33%)
Query: 24 DYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQG 83
+YT I LEQ+RRYK +F +Y EY LH+++ A+R
Sbjct: 518 EYTPITSLEQKRRYKEEFYRNYPEYCRLHSEVLVTANR---------------------- 555
Query: 84 RGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQ-IQDTIVR 142
FR+ ++ Q Q +T G+ Q Q+ I R
Sbjct: 556 --------------FRYLYTL--------------WQEQ---KTSGNMIESQETQEQIYR 584
Query: 143 EYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
EY E K DR + + RF+YLHNKL HIK+L+ YDS N
Sbjct: 585 EYKETKQDRVYRQMKERFDYLHNKLEHIKQLISNYDSQN 623
>gi|255958275|ref|NP_001077281.2| elongation factor, RNA polymerase II, 2 [Danio rerio]
Length = 655
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 53/160 (33%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 541 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGTKE 600
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
++ H E V + ++++ +P + KQ
Sbjct: 601 YQE-------VH-------------------EQVLQEY----KKIKQHSPNYYEEKQ--- 627
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
R EYLHNKL+HIK+L+ +D
Sbjct: 628 --------------------RCEYLHNKLAHIKRLIADFD 647
>gi|170036275|ref|XP_001845990.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878867|gb|EDS42250.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 625
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 71/156 (45%), Gaps = 54/156 (34%)
Query: 23 KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQ 82
KD I +EQRR+YK +F ++EY+ LH +E V+ +FA L+ L+ +
Sbjct: 510 KDDFRITTVEQRRKYKTEFDNDFQEYRRLHEIVERVSRKFAQLEEDLQHQ---------- 559
Query: 83 GRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVR 142
+N RR +K+IQ I++
Sbjct: 560 -------------------------------------RNNERR-------YKEIQRQIIK 575
Query: 143 EYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
EY E+ D +F++ ++RF YLH+KLSHIK LV YD
Sbjct: 576 EYDESIKDNRFQETKQRFNYLHSKLSHIKHLVHDYD 611
>gi|94573522|gb|AAI16572.1| Ell2 protein [Danio rerio]
Length = 675
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 53/160 (33%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 561 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGT-- 618
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
+ + V + ++++ +P + KQ
Sbjct: 619 ----------------------------KEYQEVHEQVLQEYKKIKQHSPNYYEEKQ--- 647
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
R EYLHNKL+HIK+L+ +D
Sbjct: 648 --------------------RCEYLHNKLAHIKRLIADFD 667
>gi|118104340|ref|XP_424711.2| PREDICTED: RNA polymerase II elongation factor ELL2 [Gallus gallus]
Length = 636
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 54/173 (31%)
Query: 7 TTSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
T ST + +ST LP Y K Y IV EQR+ YK+DF+ Y EY+ LHA++E++ +F L
Sbjct: 509 TASTESPSSTNELPDYFKKYIAIVSYEQRQSYKDDFNAEYDEYRNLHARMESITRKFMKL 568
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
Q ++ +PGS + ++ H E V + +Q
Sbjct: 569 DEQRKQLSPGSKEY-------QMLH-------------------EEVLEEYRKIQ----- 597
Query: 126 ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++ + + + R EYLHNKLSHIK+L+ +D
Sbjct: 598 ----------------------QSSPNYREEKHRCEYLHNKLSHIKRLIGEFD 628
>gi|317419075|emb|CBN81113.1| Ell2 protein [Dicentrarchus labrax]
Length = 690
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 53/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST S++ +P Y Y ++ ++QR+ YK+DF+ Y EY++LHA++E + RF L Q
Sbjct: 566 STEFSSTVEMPDYVVKYMPLMSIDQRQSYKDDFNAEYDEYRLLHARVENITRRFTQLDAQ 625
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
R+ PG+ ++ K++ E V + ++++ +P
Sbjct: 626 CRKLAPGTKEYQ-----------KVQ---------------EEVLKEY----KKMKQRSP 655
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K +R EYLHNKL+HIK+L+ +D
Sbjct: 656 N--------------YHEEK---------QRCEYLHNKLAHIKRLIADFD 682
>gi|317419076|emb|CBN81114.1| RNA polymerase II elongation factor ELL2 [Dicentrarchus labrax]
Length = 614
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 53/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST S++ +P Y Y ++ ++QR+ YK+DF+ Y EY++LHA++E + RF L Q
Sbjct: 490 STEFSSTVEMPDYVVKYMPLMSIDQRQSYKDDFNAEYDEYRLLHARVENITRRFTQLDAQ 549
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
R+ PG+ ++ K++ E V + ++++ +P
Sbjct: 550 CRKLAPGTKEYQ-----------KVQ---------------EEVLKEY----KKMKQRSP 579
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
YHE K +R EYLHNKL+HIK+L+ +D
Sbjct: 580 N--------------YHEEK---------QRCEYLHNKLAHIKRLIADFD 606
>gi|147904647|ref|NP_001089664.1| elongation factor RNA polymerase II [Xenopus laevis]
gi|72679841|gb|AAI00240.1| MGC115518 protein [Xenopus laevis]
Length = 597
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 55/176 (31%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G + S+ ++++ +P Y Y I EQR+ YKNDF+ Y Y+ LHA+IE + RF
Sbjct: 468 GACSNSSVPTSTSEMPDYLLKYAAISSQEQRQSYKNDFNAEYSVYRDLHARIERITRRFT 527
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L +QL++ GS +K
Sbjct: 528 QLDSQLKQLCQGSEDYKT------------------------------------------ 545
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
H QI ++EY + K++ + + + R EYLHNKL+HIKKL+ YD
Sbjct: 546 --------IHDQI----LQEYRKIKKSNPNYSEEKNRCEYLHNKLAHIKKLIAQYD 589
>gi|350402001|ref|XP_003486332.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Bombus
impatiens]
Length = 747
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 56/169 (33%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
S+ P Y YTTI EQRRRYK +F+ Y+EY+
Sbjct: 608 SSEYPDYLTYYTTISSTEQRRRYKAEFNADYEEYR------------------------- 642
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE-TPGSFA- 132
RL AK V+ RF LQ++L++E G++
Sbjct: 643 --------------------------RLHTQVAK---VSKRFVQLQDRLKQEEASGNWEE 673
Query: 133 HKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+++I+ I EY+E K++ K ++ + RF YLH KLSHIK+LV YD+ N
Sbjct: 674 YQEIRQQIFDEYNETKSNPKHKETKCRFHYLHEKLSHIKRLVLEYDTQN 722
>gi|432858960|ref|XP_004069024.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 682
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST S T P Y YT +V L+QR+ YK+DF+ Y EY+ LHA++E++ RF L Q
Sbjct: 558 STELSPQTDTPDYALKYTPLVSLDQRQNYKDDFNAEYDEYRQLHARVESITRRFTQLGAQ 617
Query: 69 LRRETPGS 76
R+ TPGS
Sbjct: 618 CRKLTPGS 625
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKT-DRKFEDCRRRFEYLHN 165
A++E++ RF L Q R+ TPGS ++++ + +++EY + K + ++D ++R EYLHN
Sbjct: 602 ARVESITRRFTQLGAQCRKLTPGSKEYQKVHEEVLKEYKKMKQHNPSYQDEKQRCEYLHN 661
Query: 166 KLSHIKKLVFIYD 178
KL+HIK+L+ +D
Sbjct: 662 KLAHIKRLIADFD 674
>gi|193648109|ref|XP_001947940.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Acyrthosiphon pisum]
Length = 517
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 54/169 (31%)
Query: 13 STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRE 72
S + +PKY +D+ I + EQ+++YK++F + +KEY+ L ++ V ++FA L++++
Sbjct: 391 SHTNPIPKYIQDFVRITNKEQKKQYKSEFMKCHKEYKHLAEIMDPVRNKFAKLKDRMLLY 450
Query: 73 TPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFA 132
GS +K L++Q+
Sbjct: 451 PKGSNEYKI-------------------------------------LESQI--------- 464
Query: 133 HKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
++EY E K D K++ + RF+YLHNKLSHIK LV +YD N
Sbjct: 465 --------LQEYTERKHDDKYQAAKTRFDYLHNKLSHIKDLVHLYDKQN 505
>gi|74183899|dbj|BAE24514.1| unnamed protein product [Mus musculus]
Length = 606
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA
Sbjct: 508 VKEG-CTASMEPSSALELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVAR 566
Query: 61 RFASLQNQLRRETPGS 76
RF L Q +R +PGS
Sbjct: 567 RFIKLDAQRKRLSPGS 582
>gi|357618195|gb|EHJ71272.1| hypothetical protein KGM_11843 [Danaus plexippus]
Length = 681
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNK 166
++ VA+ F L+ QL+R P S H+ I+ IV EYH + D ++ RRR YLH K
Sbjct: 591 GRVAQVAALFTQLEQQLKRAEPKSPHHRSIEQRIVEEYHRMRNDADYQRERRRVNYLHRK 650
Query: 167 LSHIKKLVFIYDS-NNLK 183
L+HIK++V YD NLK
Sbjct: 651 LNHIKRMVHQYDQLRNLK 668
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T+ + +T L E+ Y I RR YKN+F+ Y EYQ L+ ++ VA+ F L+
Sbjct: 545 TSVPEENNTTDLVDIERQYPPITSSSTRRAYKNEFANLYTEYQSLYGRVAQVAALFTQLE 604
Query: 67 NQLRRETPGSFAHKA-QGRGSELFH 90
QL+R P S H++ + R E +H
Sbjct: 605 QQLKRAEPKSPHHRSIEQRIVEEYH 629
>gi|348510673|ref|XP_003442869.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 618
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 55/166 (33%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YT I EQR+ YK DF++ Y EY+ LHA+I++V +F L QL+
Sbjct: 500 PDYLLKYTVICSHEQRQSYKQDFNKEYNEYRDLHARIDSVTQQFMDLDTQLK-------- 551
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
QL E S +K +++
Sbjct: 552 -------------------------------------------QLHHE---SHKYKTVRN 565
Query: 139 TIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
I++EY + K++ + + R EYLHNKL+HIKKL+ YD L+
Sbjct: 566 QILQEYRKIKKSNPNYNQDKARCEYLHNKLAHIKKLISEYDQQQLR 611
>gi|41054381|ref|NP_956001.1| RNA polymerase II elongation factor ELL [Danio rerio]
gi|37046873|gb|AAH58072.1| Elongation factor RNA polymerase II [Danio rerio]
Length = 633
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 55/160 (34%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
YT I EQR+ YKNDF+ Y EY+ LHA+IE++ +F L ++L+
Sbjct: 525 YTVISSPEQRQTYKNDFNSEYSEYRGLHARIESITRQFTILDSELK-------------- 570
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
+++ ++ ++ NQ I+ EY
Sbjct: 571 -----------------------QLQQGTDKYKTIHNQ-----------------ILEEY 590
Query: 145 HE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
+ KT+ + + R EYLHNKL+HIKKL+ YD L+
Sbjct: 591 RKIKKTNPNYSQEKNRCEYLHNKLAHIKKLIAEYDQQQLQ 630
>gi|426349511|ref|XP_004042342.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Gorilla
gorilla gorilla]
Length = 807
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ ++ LP Y Y IV EQR+ YK+DF+ Y EY+ LHA++ETVA RF L
Sbjct: 695 TASMEPSAIELPDYLIKYIAIVSYEQRQNYKDDFNAEYDEYRALHARMETVARRFIKLDA 754
Query: 68 QLRRETPGS 76
Q +R +PGS
Sbjct: 755 QRKRLSPGS 763
>gi|444726624|gb|ELW67148.1| RNA polymerase II elongation factor ELL [Tupaia chinensis]
Length = 589
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 53/180 (29%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G ++++ ++++ P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE V RF
Sbjct: 460 GTCSSASVPTSTSETPDYLLKYAAICSSEQRQSYKNDFNAEYSEYRDLHARIERVTRRFT 519
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L QLR+ + GS + + + Q+
Sbjct: 520 QLDAQLRQLSQGS-------------------------------------EEYETTRGQI 542
Query: 124 RRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
+E +++I+ KT+ + ++R EYLH+KL+HIK+ + +D L+
Sbjct: 543 LQE------YRKIK----------KTNTNYSREKQRCEYLHSKLAHIKRRIAEFDQRQLQ 586
>gi|149491565|ref|XP_001517429.1| PREDICTED: RNA polymerase II elongation factor ELL-like, partial
[Ornithorhynchus anatinus]
Length = 297
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y YT I LEQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 221 GTCNNSSVPTSTSEMPDYLLKYTAIASLEQRQTYKNDFNAEYNEYRDLHARIERITRRFT 280
Query: 64 SLQNQLRRETPGSFAHK 80
L +QL++ T GS +K
Sbjct: 281 QLDSQLKQLTQGSEEYK 297
>gi|79158628|gb|AAI08017.1| Ell2 protein, partial [Danio rerio]
Length = 641
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 565 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGT 622
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENK 148
I A++E+V RF L Q RR PG+ ++++ + +++EY + K
Sbjct: 596 ILHARVESVTRRFTKLDAQCRRLAPGTKEYQEVHEQVLQEYKKKK 640
>gi|55250662|gb|AAH85600.1| Ell2 protein, partial [Danio rerio]
Length = 626
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 552 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGT 609
>gi|34783805|gb|AAH56829.1| Ell2 protein, partial [Danio rerio]
Length = 628
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 551 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGT 608
>gi|115313035|gb|AAI24150.1| Ell2 protein [Danio rerio]
Length = 636
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y YT ++ ++QR+ YK+DF+ Y EY++LHA++E+V RF L Q RR PG+
Sbjct: 560 PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGT 617
>gi|348500238|ref|XP_003437680.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 474
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 53/160 (33%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y Y+ I +LEQR RY+ DF Y EY+ LH++I T+ F L ++++ +PG+
Sbjct: 362 PDYVLTYSPITNLEQRERYQEDFCAEYDEYKDLHSRIATITHMFVQLGSKIKSLSPGTQE 421
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
+K T+ + N+ R++ PG
Sbjct: 422 YK------------------------------TMEDQILEKYNKYRKKFPG--------- 442
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Y E K +R EYLH KLS+IK+L+ YD
Sbjct: 443 -----YREEK---------KRCEYLHEKLSYIKQLIMDYD 468
>gi|351699761|gb|EHB02680.1| RNA polymerase II elongation factor ELL, partial [Heterocephalus
glaber]
Length = 557
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 4 GFATTSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRF 62
G S S TST P Y Y I EQR+RYKNDF+ Y EY+ LHA+IE + RF
Sbjct: 428 GACNASASVPTSTSETPDYLLKYVAISSSEQRQRYKNDFNAEYSEYRDLHARIEQITRRF 487
Query: 63 ASLQNQLRRETPGS 76
L QLR+ T GS
Sbjct: 488 TQLDAQLRQLTQGS 501
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ T GS ++ + I++EY + KT+ + ++R EYLH+
Sbjct: 478 ARIEQITRRFTQLDAQLRQLTQGSEEYETTRGQILQEYRKIKKTNTNYSQEKQRCEYLHS 537
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 538 KLAHIKRLIAEYDQWQLQ 555
>gi|301621843|ref|XP_002940254.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL [Xenopus (Silurana) tropicalis]
Length = 602
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 55/172 (31%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G + S+ ++++ +P Y Y I E R+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 473 GACSNSSVPTSTSEMPDYLLKYAAISSQELRQSYKNDFNAEYSEYRDLHARIERITRRFT 532
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L +QL++ GS +K
Sbjct: 533 QLDSQLKQLCQGSEEYKT------------------------------------------ 550
Query: 124 RRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLV 174
H QI ++EY + KT+ + + + R EYLHNKL+HIKK +
Sbjct: 551 --------IHDQI----LQEYRKIKKTNPNYSEEKNRCEYLHNKLAHIKKRI 590
>gi|187608271|ref|NP_001119878.1| MARVEL domain containing 2b [Danio rerio]
Length = 572
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 65/161 (40%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+ Y Y TI E+R RYK F++ Y EY+ LHA+++ + +F + N L R P
Sbjct: 454 IADYVAKYPTIRTDEERERYKAVFNDQYAEYKELHAEVQVLTQKFEEMDN-LMRNLP--- 509
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ P S ++
Sbjct: 510 ------------------------------------------------QRPSSQMEQERI 521
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+IV+EY+ K D +++ R R EYL NKL+HIK+ + YD
Sbjct: 522 SSIVQEYNRKKADPTYQEKRERCEYLKNKLAHIKQKIQEYD 562
>gi|327263225|ref|XP_003216421.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Anolis
carolinensis]
Length = 639
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 55/171 (32%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST +++ LP Y Y IV EQR+ YK DF+ Y EY+ LHA++E+V RF L Q
Sbjct: 515 STDPLSTSELPDYFVKYIAIVSYEQRQSYKEDFNAEYDEYRNLHARMESVTRRFMKLDAQ 574
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFR-FRLSIAAAKIETVASRFASLQNQLRRET 127
+ +PGS + ++ H ++ F+ +R ++++ +
Sbjct: 575 RKLVSPGSKEY-------QILHEEV----FKEYR--------------------KIKQSS 603
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P Y+E K C R EYLHNKL+HIK+L+ +D
Sbjct: 604 PN--------------YNEEK-------C--RCEYLHNKLAHIKRLIGEFD 631
>gi|348558872|ref|XP_003465240.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Cavia
porcellus]
Length = 594
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G TS STS P Y Y I EQR+RYKNDF+ Y EY+ LHA+IE + RF
Sbjct: 466 GACGTSVPTSTSE-TPDYLLKYVAISSSEQRQRYKNDFNSEYSEYRDLHARIEQITRRFT 524
Query: 64 SLQNQLRRETPGS 76
L QLR+ GS
Sbjct: 525 QLDAQLRQLAQGS 537
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ GS ++ + I++EY + KT+ + ++R EYLH+
Sbjct: 514 ARIEQITRRFTQLDAQLRQLAQGSEEYETTRGQILQEYRKIKKTNTNYSREKQRCEYLHS 573
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD + L+
Sbjct: 574 KLAHIKRLIAEYDQSQLQ 591
>gi|77455300|gb|ABA86459.1| CG32217 [Drosophila erecta]
Length = 1050
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 67/168 (39%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ +P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 821 DTDSSSMPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 880
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 881 ---------------------------------------------------SARRCDNGY 889
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + ++RF+YLH KL+HIK+LV YD
Sbjct: 890 GDYDHIKRQIVCEYERINNDRTIGEDKKRFDYLHAKLAHIKQLVMDYD 937
>gi|77455296|gb|ABA86457.1| CG32217 [Drosophila yakuba]
Length = 1043
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 52/165 (31%)
Query: 15 STFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRET 73
S+ +P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 822 SSSMPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE--- 878
Query: 74 PGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAH 133
RR G +
Sbjct: 879 ------------------------------------------------SARRCDNGYGDY 890
Query: 134 KQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I+ IV EY DR + ++RF+YLH KL+HIK+LV YD
Sbjct: 891 DHIKRQIVCEYERINNDRTIGEDKQRFDYLHAKLAHIKQLVMDYD 935
>gi|77455298|gb|ABA86458.1| CG32217 [Drosophila yakuba]
Length = 1041
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 52/165 (31%)
Query: 15 STFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRET 73
S+ +P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 820 SSSMPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE--- 876
Query: 74 PGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAH 133
RR G +
Sbjct: 877 ------------------------------------------------SARRCDNGYGDY 888
Query: 134 KQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I+ IV EY DR + ++RF+YLH KL+HIK+LV YD
Sbjct: 889 DHIKRQIVCEYERINNDRTIGEDKQRFDYLHAKLAHIKQLVMDYD 933
>gi|410950878|ref|XP_003982129.1| PREDICTED: RNA polymerase II elongation factor ELL [Felis catus]
Length = 613
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G +S+ ++++ P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 484 GACNSSSVPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFT 543
Query: 64 SLQNQLRRETPGS 76
L QLR+ + GS
Sbjct: 544 QLDAQLRQLSQGS 556
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 533 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 592
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 593 KLAHIKRLIAEYDQRQLQ 610
>gi|198466495|ref|XP_002135203.1| GA23928 [Drosophila pseudoobscura pseudoobscura]
gi|198150626|gb|EDY73830.1| GA23928 [Drosophila pseudoobscura pseudoobscura]
Length = 1115
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF +L ++
Sbjct: 883 DADSSSSPRYDFSQYVPIHSLEVRRRYKTEFESDYDEYRKLLTRVEGVRNRFQTLSERM- 941
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
+ RR G
Sbjct: 942 --------------------------------------------------DSARRSDNGC 951
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ QI+ IV EY DR + ++RF+YL KL+HIK+LV YD
Sbjct: 952 GDYDQIKRQIVSEYERINNDRTIREDKQRFDYLQAKLAHIKQLVTDYD 999
>gi|73986120|ref|XP_541936.2| PREDICTED: RNA polymerase II elongation factor ELL [Canis lupus
familiaris]
Length = 613
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G +S+ ++++ P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 484 GTCNSSSVPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFT 543
Query: 64 SLQNQLRRETPGS 76
L QLR+ + GS
Sbjct: 544 QLDAQLRQLSQGS 556
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 533 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 592
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 593 KLAHIKRLIAEYDQRQLQ 610
>gi|391348457|ref|XP_003748464.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Metaseiulus occidentalis]
Length = 563
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 54/170 (31%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
ST +S S+ +P+Y Y I EQR RYK+DF Y Y+ LH +++ + +F L+
Sbjct: 444 STGSSPSSDVPEYLGRYVEITSTEQRYRYKDDFRAEYPRYKALHEVLQSYSRKFTKLEMD 503
Query: 69 LRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETP 128
LR + GSE F
Sbjct: 504 LR----------SSEYGSEPF--------------------------------------- 514
Query: 129 GSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++I I+ Y ++K D ++++ R+ F LH KLS+IK+LV YD
Sbjct: 515 -----RRIAAEIMDHYRKSKDDPEYQNARKNFNLLHEKLSYIKQLVAEYD 559
>gi|397487875|ref|XP_003815003.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Pan paniscus]
Length = 516
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 403 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 456
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 457 ---------------------------------------------VRRGTP---EYKVLE 468
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 469 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 513
>gi|410898661|ref|XP_003962816.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 584
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 55/159 (34%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
Y+ I QR+ YK++F+ Y EY++LHA+I+ V +F L QL+
Sbjct: 468 YSVISSYHQRQSYKHEFNSDYSEYRLLHARIDGVTQQFMELNAQLQ-------------- 513
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
QL R+ S +K++ D +++ Y
Sbjct: 514 -------------------------------------QLTRD---SSKYKEVHDQVIQAY 533
Query: 145 HE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
K++ ++ + R EYLHNKL+HIKKL+ YD L
Sbjct: 534 GRIKKSNPNYQQEKTRCEYLHNKLAHIKKLISSYDQQQL 572
>gi|417403292|gb|JAA48457.1| Putative rna polymerase ii elongation factor [Desmodus rotundus]
Length = 610
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 481 GTCNNSSVPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFT 540
Query: 64 SLQNQLRRETPGS 76
L QLR+ + GS
Sbjct: 541 QLDAQLRQLSQGS 553
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 530 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 589
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 590 KLAHIKRLIAEYDQRQLQ 607
>gi|390339057|ref|XP_791824.2| PREDICTED: uncharacterized protein LOC586975 [Strongylocentrotus
purpuratus]
Length = 411
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 54/180 (30%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G + S S+++ +P+Y Y I LEQR +YK +F+ Y +Y+ H IE + +F
Sbjct: 282 GKESPSGDVSSTSVVPEYLMKYRNITSLEQRLKYKEEFNNLYPQYREHHKFIEGIKQKFK 341
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L++ EL+H K +
Sbjct: 342 GLKD-------------------ELYHTKKD----------------------------- 353
Query: 124 RRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
S A+ +QD ++ EY++ D ++ RR++ LH+ L HIK L+ +YD+ ++
Sbjct: 354 ------SEAYDYLQDKVIEEYNKITQDPAYKTKERRWKELHHLLGHIKALIMVYDNEPMQ 407
>gi|432105422|gb|ELK31637.1| RNA polymerase II elongation factor ELL [Myotis davidii]
Length = 508
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 55/180 (30%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G +S+ ++++ P Y Y TI EQR+ YKNDF+ Y EYQ LH + E V RF
Sbjct: 381 GACNSSSVPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYQDLHTRTEQVTRRFT 440
Query: 64 SLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQL 123
L QL+ +LS ++ + +T +
Sbjct: 441 QLDAQLQ------------------------------QLSQSSEEYKTTCGK-------- 462
Query: 124 RRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
I++EY + K ++ + R EYLH+KL+HIK+L YD L+
Sbjct: 463 ----------------ILQEYCKIKKTNYSQE-KHRCEYLHSKLAHIKRLTAEYDQRQLQ 505
>gi|119597643|gb|EAW77237.1| elongation factor RNA polymerase II-like 3, isoform CRA_a [Homo
sapiens]
Length = 427
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 314 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 367
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 368 ---------------------------------------------VRRGTP---EYKVLE 379
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 380 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 424
>gi|45550656|ref|NP_649155.3| Su(Tpl), isoform A [Drosophila melanogaster]
gi|281366481|ref|NP_001163477.1| Su(Tpl), isoform B [Drosophila melanogaster]
gi|45445818|gb|AAF49098.3| Su(Tpl), isoform A [Drosophila melanogaster]
gi|209863150|gb|ACI88733.1| LD19974p [Drosophila melanogaster]
gi|221307744|gb|ACM16731.1| LD12841p [Drosophila melanogaster]
gi|272455250|gb|ACZ94748.1| Su(Tpl), isoform B [Drosophila melanogaster]
Length = 1059
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 819 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 878
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 879 ---------------------------------------------------SARRCDNGY 887
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + + RF+YLH KL+HIK+LV YD
Sbjct: 888 GDYDHIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYD 935
>gi|395847927|ref|XP_003796615.1| PREDICTED: RNA polymerase II elongation factor ELL [Otolemur
garnettii]
Length = 619
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G A+ TS S +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 493 GCASVPTSTSE---MPDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFT 549
Query: 64 SLQNQLRRETPGS 76
L QLR+ + GS
Sbjct: 550 QLDAQLRQLSQGS 562
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 539 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 598
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 599 KLAHIKRLIAEYDQRQLQ 616
>gi|15991717|gb|AAL13036.1| ELL [Drosophila melanogaster]
Length = 1060
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 820 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 879
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 880 ---------------------------------------------------SARRCDNGY 888
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + + RF+YLH KL+HIK+LV YD
Sbjct: 889 GDYDHIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYD 936
>gi|77455290|gb|ABA86454.1| CG32217 [Drosophila melanogaster]
Length = 1047
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 813 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 872
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 873 ---------------------------------------------------SARRCDNGY 881
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + + RF+YLH KL+HIK+LV YD
Sbjct: 882 GDYDHIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYD 929
>gi|10130023|gb|AAG13463.1| RNA polymerase II elongation factor ELL3 [Homo sapiens]
Length = 397
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|193786605|dbj|BAG51928.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 238 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 291
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 292 ---------------------------------------------VRRGTP---EYKVLE 303
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 304 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 348
>gi|441628712|ref|XP_003275964.2| PREDICTED: RNA polymerase II elongation factor ELL [Nomascus
leucogenys]
Length = 755
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 12/91 (13%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGSEE 566
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKI 109
+ ++EP L++A AKI
Sbjct: 567 Y------------EVEPPAAYCALALAGAKI 585
>gi|13376768|ref|NP_079441.1| RNA polymerase II elongation factor ELL3 [Homo sapiens]
gi|48428154|sp|Q9HB65.2|ELL3_HUMAN RecName: Full=RNA polymerase II elongation factor ELL3
gi|10439104|dbj|BAB15432.1| unnamed protein product [Homo sapiens]
gi|16306850|gb|AAH06548.1| Elongation factor RNA polymerase II-like 3 [Homo sapiens]
gi|17939488|gb|AAH19293.1| Elongation factor RNA polymerase II-like 3 [Homo sapiens]
gi|48146833|emb|CAG33639.1| ELL3 [Homo sapiens]
gi|119597644|gb|EAW77238.1| elongation factor RNA polymerase II-like 3, isoform CRA_b [Homo
sapiens]
gi|312151396|gb|ADQ32210.1| elongation factor RNA polymerase II-like 3 [synthetic construct]
Length = 397
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|193785167|dbj|BAG54320.1| unnamed protein product [Homo sapiens]
Length = 397
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|343958286|dbj|BAK62998.1| RNA polymerase II elongation factor ELL3 [Pan troglodytes]
Length = 397
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|350536499|ref|NP_001233428.1| RNA polymerase II elongation factor ELL3 [Pan troglodytes]
gi|343960238|dbj|BAK63973.1| RNA polymerase II elongation factor ELL3 [Pan troglodytes]
gi|410206690|gb|JAA00564.1| elongation factor RNA polymerase II-like 3 [Pan troglodytes]
Length = 397
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|78214289|gb|ABB36459.1| AT31092p [Drosophila melanogaster]
Length = 808
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 574 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 633
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 634 ---------------------------------------------------SARRCDNGY 642
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + + RF+YLH KL+HIK+LV YD
Sbjct: 643 GDYDHIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYD 690
>gi|16768980|gb|AAL28709.1| LD12812p [Drosophila melanogaster]
Length = 430
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 190 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERL- 248
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 249 --------------------------------------------------ESARRCDNGY 258
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY DR + + RF+YLH KL+HIK+LV YD
Sbjct: 259 GDYDHIKRQIVCEYERINNDRTIGEDKERFDYLHAKLAHIKQLVMDYD 306
>gi|431922019|gb|ELK19192.1| RNA polymerase II elongation factor ELL [Pteropus alecto]
Length = 610
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G +S+ ++++ P Y Y TI EQR+ YKNDF+ Y EY+ LH++IE + RF
Sbjct: 481 GTCNSSSIPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHSRIEQITRRFT 540
Query: 64 SLQNQLRRETPGS 76
L QLR+ + GS
Sbjct: 541 QLDAQLRQLSQGS 553
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
++IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 530 SRIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 589
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 590 KLAHIKRLIAEYDQRQLQ 607
>gi|426378876|ref|XP_004056134.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Gorilla
gorilla gorilla]
Length = 397
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 338 ---------------------------------------------VQRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILAFEEKN 394
>gi|47224180|emb|CAG13100.1| unnamed protein product [Tetraodon nigroviridis]
Length = 534
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 53/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y TI LEQR+RYK DF Y EY+ LH +I + F L +++ TPG+
Sbjct: 424 LPDYLIKYRTITALEQRQRYKEDFCAEYDEYRALHDRIGAITEMFVQLGSKINTLTPGTQ 483
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+K ME + + ++ + +++ PG
Sbjct: 484 EYKI-----------ME---------------DQILQKY----RKYKKKFPG-------- 505
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Y E K +R EYLH KLSHIK L+ YD
Sbjct: 506 ------YREEK---------KRCEYLHQKLSHIKGLITDYD 531
>gi|195379438|ref|XP_002048486.1| GJ13997 [Drosophila virilis]
gi|194155644|gb|EDW70828.1| GJ13997 [Drosophila virilis]
Length = 835
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 54/161 (33%)
Query: 19 PKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
P+Y+ Y I LE RRRYK +F Y EY+ L +E V +RF L
Sbjct: 603 PRYDFSQYAPIRTLEVRRRYKTEFESDYDEYRKLLTSVEDVRNRFQDL------------ 650
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ ++E R +Q++R+
Sbjct: 651 ----------------------------SKRLEGARRRGGGDYDQIKRQ----------- 671
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
IV EY +DR + RF+YLH KL+HIK+LV YD
Sbjct: 672 --IVSEYERINSDRSIHKDKLRFDYLHAKLAHIKQLVMDYD 710
>gi|198430405|ref|XP_002128540.1| PREDICTED: similar to elongation factor RNA polymerase II [Ciona
intestinalis]
Length = 679
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNK 166
AK+ A RFA Q QL+ + G+ +K IQ ++ EY + K + ++ R R +YLH K
Sbjct: 558 AKVAAEAKRFAEWQMQLKEQKEGTDQYKVIQRRVLHEYSKLKENAEYWKDRTRMQYLHRK 617
Query: 167 LSHIKKLVFIYDS 179
L HIK+LV YDS
Sbjct: 618 LKHIKELVLQYDS 630
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 23 KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
K Y I +QR +Y+ DFS YKEY +L+AK+ A RFA Q QL+ + G+ +K
Sbjct: 528 KKYKVIEGSDQRNKYRQDFSAEYKEYLLLYAKVAAEAKRFAEWQMQLKEQKEGTDQYK 585
>gi|355777999|gb|EHH63035.1| hypothetical protein EGM_15922 [Macaca fascicularis]
Length = 416
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 303 VPDYLLQYRAIRSAEQQHAYERDFETDYAEYRILHARVGTASQRFTELGAEIKR------ 356
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 357 ---------------------------------------------VQRGTP---EYKVLE 368
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 369 DKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 413
>gi|300797566|ref|NP_001179027.1| RNA polymerase II elongation factor ELL [Bos taurus]
gi|296486201|tpg|DAA28314.1| TPA: elongation factor RNA polymerase II [Bos taurus]
Length = 616
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE V RF L QLR+ + GS
Sbjct: 502 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRGLHARIERVTRRFTQLDAQLRQLSQGS 559
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE V RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 536 ARIERVTRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 595
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 596 KLAHIKRLIAEYDQRQLQ 613
>gi|410961397|ref|XP_003987269.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Felis catus]
Length = 399
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 65/164 (39%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y YT I EQ+R Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 286 VPDYLLQYTAIHSAEQQRAYEQDFEMDYTEYRILHARVGAASQRFRELGAEIKRVQQGTP 345
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 346 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 367
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 368 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 396
>gi|440904017|gb|ELR54590.1| RNA polymerase II elongation factor ELL, partial [Bos grunniens
mutus]
Length = 582
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE V RF L QLR+ + GS
Sbjct: 468 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRGLHARIERVTRRFTQLDAQLRQLSQGS 525
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE V RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 502 ARIERVTRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 561
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 562 KLAHIKRLIAEYDQRQLQ 579
>gi|355692668|gb|EHH27271.1| hypothetical protein EGK_17433 [Macaca mulatta]
Length = 416
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 303 VPDYLLQYRAIRSAEQQHAYERDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 356
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 357 ---------------------------------------------VQRGTP---EYKVLE 368
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 369 DKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 413
>gi|354473872|ref|XP_003499156.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Cricetulus
griseus]
Length = 692
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
A T TS S P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L
Sbjct: 570 APTPTSES-----PDYLLKYPAISSSEQRQSYKNDFNAEYNEYRSLHARIEQITRRFTQL 624
Query: 66 QNQLRRETPGS 76
QLR+ + GS
Sbjct: 625 DAQLRQLSQGS 635
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + +RR EYLH
Sbjct: 612 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSREKRRCEYLHR 671
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 672 KLAHIKRLIAEYDQRQLQ 689
>gi|221115460|ref|XP_002154956.1| PREDICTED: uncharacterized protein LOC100199756 [Hydra
magnipapillata]
Length = 288
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 48/73 (65%)
Query: 110 ETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSH 169
+++ ++F L RR+ GS + ++Q+ I+ Y++ + D K+++ ++R E LH KLSH
Sbjct: 216 DSITTKFIELDRSWRRQEKGSDEYYRLQNEIIDSYNKQQADEKYKEMKKRCEELHMKLSH 275
Query: 170 IKKLVFIYDSNNL 182
IKKLV YD+ ++
Sbjct: 276 IKKLVVDYDNGHM 288
>gi|184186702|gb|ACC69115.1| RNA polymerase II elongation factor ELL3 (predicted) [Rhinolophus
ferrumequinum]
Length = 136
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 68/180 (37%), Gaps = 53/180 (29%)
Query: 2 KRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASR 61
+R + + +P Y Y I EQ+R Y+ DF Y EY++LHA++ + R
Sbjct: 7 QRPSVQADSESPNPEGVPDYLLQYGAIHSTEQQRAYEQDFETDYAEYRILHARVAAASQR 66
Query: 62 FASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQN 121
F L +++R G+ HK + KI +F
Sbjct: 67 FMDLGAEIKRVQQGTPEHK-----------------------VLEEKIVQEYKKF----- 98
Query: 122 QLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
R+ PG Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 99 --RKRNPG--------------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 133
>gi|426230280|ref|XP_004009204.1| PREDICTED: RNA polymerase II elongation factor ELL [Ovis aries]
Length = 417
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE V RF L QLR+ + GS
Sbjct: 303 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRGLHARIERVTRRFTQLDAQLRQLSQGS 360
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE V RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 337 ARIERVTRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 396
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 397 KLAHIKRLIAEYDQRQLQ 414
>gi|194751937|ref|XP_001958280.1| GF10841 [Drosophila ananassae]
gi|190625562|gb|EDV41086.1| GF10841 [Drosophila ananassae]
Length = 1110
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 19 PKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
P+Y+ Y I LE RRRYK +F Y EY L ++ETV RF L +L
Sbjct: 883 PRYDFSQYVPIQTLEVRRRYKTEFESDYTEYCKLLTRVETVRKRFQDLSERLE------- 935
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
A + E + ++ Q+
Sbjct: 936 ---------------------------GARRHENGYGDYDHIKQQI-------------- 954
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
V EY +D +D ++RF+YLH KL+HIK+LV YD
Sbjct: 955 ---VSEYERINSDHTIQDDKQRFDYLHAKLAHIKQLVMDYD 992
>gi|77455292|gb|ABA86455.1| CG32217 [Drosophila simulans]
Length = 1045
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 811 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 870
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 871 ---------------------------------------------------SARRCDNGY 879
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY D + ++RF+YLH KL+HIK+LV YD
Sbjct: 880 GDYDHIKRQIVCEYERINNDHTIGEDKQRFDYLHAKLAHIKQLVMDYD 927
>gi|195354290|ref|XP_002043631.1| GM15678 [Drosophila sechellia]
gi|194127799|gb|EDW49842.1| GM15678 [Drosophila sechellia]
Length = 1057
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 817 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 876
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 877 ---------------------------------------------------SARRCDNGY 885
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY D + ++RF+YLH KL+HIK+LV YD
Sbjct: 886 GDYDHIKRQIVCEYERINNDHTIGEDKQRFDYLHAKLAHIKQLVMDYD 933
>gi|195128579|ref|XP_002008740.1| GI13662 [Drosophila mojavensis]
gi|193920349|gb|EDW19216.1| GI13662 [Drosophila mojavensis]
Length = 1071
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 64/161 (39%), Gaps = 54/161 (33%)
Query: 19 PKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
P+Y+ Y I LE RRRYK +F Y EY+ L +E V +RF L
Sbjct: 825 PRYDFSQYAPIRTLEVRRRYKTEFESDYDEYRKLLTSVEDVRNRFQDL------------ 872
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ ++E R +Q++R+
Sbjct: 873 ----------------------------STRLEGARRRGGGDYDQIKRQ----------- 893
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
IV EY +DR + + RF+YLH KL++IK+LV YD
Sbjct: 894 --IVSEYERINSDRNIHNDKLRFDYLHAKLAYIKQLVMDYD 932
>gi|344241335|gb|EGV97438.1| RNA polymerase II elongation factor ELL [Cricetulus griseus]
Length = 545
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
A T TS S P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L
Sbjct: 423 APTPTSES-----PDYLLKYPAISSSEQRQSYKNDFNAEYNEYRSLHARIEQITRRFTQL 477
Query: 66 QNQLRRETPGS 76
QLR+ + GS
Sbjct: 478 DAQLRQLSQGS 488
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + +RR EYLH
Sbjct: 465 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSREKRRCEYLHR 524
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 525 KLAHIKRLIAEYDQRQLQ 542
>gi|410907233|ref|XP_003967096.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Takifugu
rubripes]
Length = 550
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 53/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y+TI LEQR++YK DF Y EY+ LH +I + F L +++ +PG+
Sbjct: 436 LPDYLIKYSTITSLEQRQKYKEDFCGEYDEYRALHDRIGAITEMFVQLGSKINTLSPGTQ 495
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+K ME + + ++ + +++ PG
Sbjct: 496 EYKI-----------ME---------------DQILQKY----RKYKKKFPG-------- 517
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Y E K +R EYLH KLSHIK L+ YD
Sbjct: 518 ------YREEK---------KRCEYLHQKLSHIKGLITDYD 543
>gi|77455294|gb|ABA86456.1| CG32217 [Drosophila simulans]
Length = 1048
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 814 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 873
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 874 ---------------------------------------------------SARRCDNGY 882
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY D + ++RF+YLH KL+HIK+LV YD
Sbjct: 883 GDYDHIKRQIVCEYERINNDHTIGEDKQRFDYLHAKLAHIKQLVMDYD 930
>gi|301753927|ref|XP_002912776.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Ailuropoda
melanoleuca]
Length = 613
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 499 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFTQLDAQLRQLSQGS 556
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 533 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 592
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 593 KLAHIKRLIAEYDQRQLQ 610
>gi|195591655|ref|XP_002085554.1| GD12242 [Drosophila simulans]
gi|194197563|gb|EDX11139.1| GD12242 [Drosophila simulans]
Length = 1056
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 65/168 (38%), Gaps = 52/168 (30%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
++ S+ P+Y+ Y I LE RRRYK +F Y EY+ L ++E V +RF L +L
Sbjct: 818 DTDSSATPRYDFSQYVPIQTLEVRRRYKTEFESDYDEYRKLLTRVEDVRNRFQDLSERLE 877
Query: 71 RETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGS 130
RR G
Sbjct: 878 ---------------------------------------------------SARRCDNGY 886
Query: 131 FAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+ IV EY D + ++RF+YLH KL+HIK+LV YD
Sbjct: 887 GDYDHIKRQIVCEYERINNDHTIGEDKQRFDYLHAKLAHIKQLVMDYD 934
>gi|297296291|ref|XP_002804791.1| PREDICTED: RNA polymerase II elongation factor ELL3-like isoform 2
[Macaca mulatta]
Length = 592
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R G+
Sbjct: 479 VPDYLLQYRAIRSAEQQHAYERDFETDYAEYRILHARVGTASQRFIELGAEIKRVQRGTP 538
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+K + + + R+ PG
Sbjct: 539 EYK------------------------------VLEDKIVQEYKKFRKRYPG-------- 560
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 561 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 589
>gi|281182979|ref|NP_001162438.1| RNA polymerase II elongation factor ELL3 [Papio anubis]
gi|163781049|gb|ABY40816.1| elongation factor RNA polymerase II-like 3 (predicted) [Papio
anubis]
Length = 399
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 286 VPDYLLQYRAIRSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 339
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 340 ---------------------------------------------VQRGTP---EYKVLE 351
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 352 DKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 396
>gi|345319276|ref|XP_001517921.2| PREDICTED: RNA polymerase II elongation factor ELL3-like
[Ornithorhynchus anatinus]
Length = 323
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCR---RRFEYL 163
A++ V+ RF L +++R GS HK + D IV EY K +++ D R RR EYL
Sbjct: 245 ARVGAVSRRFTQLGAEMKRVQRGSPQHKVLADKIVHEY--RKFQKRYPDYREEKRRCEYL 302
Query: 164 HNKLSHIKKLVFIYDSNN 181
H KLSHIK L+ ++ N
Sbjct: 303 HQKLSHIKGLIVAFEEKN 320
>gi|332235342|ref|XP_003266863.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Nomascus
leucogenys]
Length = 397
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 284 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 338 ---------------------------------------------VQRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|281343539|gb|EFB19123.1| hypothetical protein PANDA_000556 [Ailuropoda melanoleuca]
Length = 623
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 509 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFTQLDAQLRQLSQGS 566
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 543 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 602
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 603 KLAHIKRLIAEYDQRQLQ 620
>gi|242003767|ref|XP_002422854.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212505724|gb|EEB10116.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 441
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 54/154 (35%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
YTTI + QRR+YK +F Y EY+ LHA ++ V +F+ L+++L
Sbjct: 337 YTTITNDAQRRQYKEEFISCYPEYKALHANMDKVTQKFSRLKDEL--------------- 381
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
+K + + F L N+L I EY
Sbjct: 382 ----------------------SKHDKTSKEFRDL-NKL----------------IKSEY 402
Query: 145 HENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++ D+ +++ ++RF YLH KLS IKKLV YD
Sbjct: 403 NDRLADKTYQEEKKRFYYLHGKLSRIKKLVSEYD 436
>gi|149757364|ref|XP_001500713.1| PREDICTED: RNA polymerase II elongation factor ELL [Equus caballus]
Length = 592
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 478 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFTQLDAQLRQLSQGS 535
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 512 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 571
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 572 KLAHIKRLIAEYDQRQLQ 589
>gi|157822233|ref|NP_001100774.1| RNA polymerase II elongation factor ELL [Rattus norvegicus]
gi|149036043|gb|EDL90709.1| elongation factor RNA polymerase II (predicted) [Rattus norvegicus]
Length = 604
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
A+ TS S + P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L
Sbjct: 480 ASVPTSTSET---PDYLLKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQL 536
Query: 66 QNQLRRETPGS 76
QLR+ + GS
Sbjct: 537 DAQLRQLSQGS 547
>gi|84569932|gb|AAI11076.1| Ell2 protein, partial [Rattus norvegicus]
Length = 87
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENK-TDRKFEDCRRRFEYLHN 165
A++ETVA RF L Q +R +PGS ++ + + +++EY + K + + + + R EYLHN
Sbjct: 7 ARMETVARRFIKLDAQRKRLSPGSKEYQNVHEEVLQEYQKIKQSSPNYHEEKYRCEYLHN 66
Query: 166 KLSHIKKLVFIYD 178
KL+HIK+L+ +D
Sbjct: 67 KLAHIKRLIGEFD 79
>gi|109080886|ref|XP_001109518.1| PREDICTED: RNA polymerase II elongation factor ELL3-like isoform 1
[Macaca mulatta]
Length = 399
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ T + RF L +++R
Sbjct: 286 VPDYLLQYRAIRSAEQQHAYERDFETDYAEYRILHARVGTASQRFIELGAEIKR------ 339
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 340 ---------------------------------------------VQRGTP---EYKVLE 351
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 352 DKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 396
>gi|348506220|ref|XP_003440658.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 523
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 70/171 (40%), Gaps = 53/171 (30%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T S T+ LP Y Y+TI LEQR++Y DF Y EY+ LH +I + F L +
Sbjct: 400 TPVSCGTAEDLPDYLTKYSTITALEQRQKYNEDFCAEYDEYRALHDRIGAITEMFVQLGS 459
Query: 68 QLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRET 127
++ +PG+ +K ME E + ++ + +++
Sbjct: 460 KINTLSPGTQEYKL-----------ME---------------EQILQKY----RKYKKKF 489
Query: 128 PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
PG Y E K +R YLH KLSHIK L+ YD
Sbjct: 490 PG--------------YREEK---------KRCVYLHKKLSHIKGLITEYD 517
>gi|195428617|ref|XP_002062368.1| GK17503 [Drosophila willistoni]
gi|194158453|gb|EDW73354.1| GK17503 [Drosophila willistoni]
Length = 1144
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 60/172 (34%)
Query: 12 NSTSTFLPKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL- 69
NS+ST +Y+ Y+ I LE RRRYK +F Y EY L ++E V RF L +L
Sbjct: 900 NSSSTL--RYDFSQYSPIRTLEVRRRYKTEFESDYVEYCKLLTRVEDVCKRFQDLSERLE 957
Query: 70 ---RRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
RR+T G G + +
Sbjct: 958 SARRRDT---------GYGGDHY------------------------------------- 971
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I+ IV EY +DR + ++RF+YLH KL+HIK+LV YD
Sbjct: 972 -------DNIEQQIVSEYERIHSDRTIIEDKQRFDYLHAKLAHIKQLVSDYD 1016
>gi|432938679|ref|XP_004082541.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Oryzias
latipes]
Length = 610
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 53/162 (32%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
Y YT+I QR+ YK DF++ Y EY+ LHA+I+ +F L++QL++ GS +K
Sbjct: 494 YLSKYTSICSHSQRQSYKQDFNKEYSEYRDLHARIDHTTRQFLELESQLKQLHRGSLKYK 553
Query: 81 AQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTI 140
TV ++ ++++ P
Sbjct: 554 ------------------------------TVHNKILQKYRKIKKSNPS----------- 572
Query: 141 VREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
Y+++K R EYLHNKL+HIKKL+ +D L
Sbjct: 573 ---YNQDKV---------RCEYLHNKLAHIKKLISDFDQQQL 602
>gi|351697126|gb|EHB00045.1| RNA polymerase II elongation factor ELL2 [Heterocephalus glaber]
Length = 375
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 56/179 (31%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K G T S S++ LP Y + TIV E R+ +DF+ Y EY+ L
Sbjct: 244 VKEG-CTASMELSSTIELPDYLIKHITIVSYEHRQNSMDDFNAEYDEYRAL--------- 293
Query: 61 RFASLQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQ 120
HA+ME TVA RF L
Sbjct: 294 -----------------------------HARME----------------TVAQRFIKLD 308
Query: 121 NQLRRETPGSFAHKQIQDTIVREYHENKTDR-KFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Q + +PGS + + + I++EY + R + + + R EYLHNKL+HIK+L+ +D
Sbjct: 309 AQRKCLSPGSKEDQNVHEEILQEYQKIMQSRPNYHEEKYRCEYLHNKLAHIKRLIGEFD 367
>gi|343959264|dbj|BAK63489.1| RNA polymerase II elongation factor ELL3 [Pan troglodytes]
Length = 397
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 67/165 (40%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y Y++LHA++ T + RF L +++R
Sbjct: 284 IPDYLLQYRAIHSAEQQHAYEQDFETDYAGYRILHARVGTASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+RR TP +K ++
Sbjct: 338 ---------------------------------------------VRRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
D I++EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 DKIIQEYKKFRKQYPSYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|195020238|ref|XP_001985153.1| GH16905 [Drosophila grimshawi]
gi|193898635|gb|EDV97501.1| GH16905 [Drosophila grimshawi]
Length = 1137
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 63/161 (39%), Gaps = 55/161 (34%)
Query: 19 PKYE-KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
P+Y+ +Y I LE RRRYK +F Y EY L +E V+ RF L +L
Sbjct: 906 PRYDFSNYAPIRTLEVRRRYKTEFESDYDEYSKLVTSVEGVSKRFQDLSKRLED------ 959
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
A K G E+ +QI
Sbjct: 960 ARKGGGDYDEI--------------------------------------------KRQI- 974
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
V EY +DR+ + + RF+YLH KL+HIK+LV YD
Sbjct: 975 ---VSEYQRINSDRRIHEDKLRFDYLHAKLAHIKQLVVDYD 1012
>gi|1947073|gb|AAC53150.1| ELL [Mus musculus]
gi|15928703|gb|AAH14816.1| Elongation factor RNA polymerase II [Mus musculus]
gi|19353178|gb|AAH24894.1| Elongation factor RNA polymerase II [Mus musculus]
Length = 602
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 13 STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRE 72
++S+ P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+
Sbjct: 482 TSSSETPDYLLKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQLDAQLRQL 541
Query: 73 TPGS 76
+ GS
Sbjct: 542 SQGS 545
>gi|124358953|ref|NP_031950.2| RNA polymerase II elongation factor ELL [Mus musculus]
gi|341940493|sp|O08856.2|ELL_MOUSE RecName: Full=RNA polymerase II elongation factor ELL; AltName:
Full=Eleven-nineteen lysine-rich leukemia protein
gi|74186604|dbj|BAE34775.1| unnamed protein product [Mus musculus]
gi|148696896|gb|EDL28843.1| elongation factor RNA polymerase II [Mus musculus]
Length = 602
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 13 STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRE 72
++S+ P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+
Sbjct: 482 TSSSETPDYLLKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQLDAQLRQL 541
Query: 73 TPGS 76
+ GS
Sbjct: 542 SQGS 545
>gi|355685833|gb|AER97864.1| elongation factor RNA polymerase II [Mustela putorius furo]
Length = 313
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y TI EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 199 PDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITRRFTQLDAQLRQLSQGS 256
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 233 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 292
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 293 KLAHIKRLIAEYDQRQLQ 310
>gi|351707449|gb|EHB10368.1| RNA polymerase II elongation factor ELL3 [Heterocephalus glaber]
Length = 392
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 64/165 (38%), Gaps = 53/165 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y TI EQ+R Y+ DF Y +Y++LHA++ + RF L +++R PG+
Sbjct: 279 VPDYLLQYRTIHSTEQQRAYEQDFEADYAQYRILHARVGAASQRFIELGAEIKRTQPGTP 338
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 339 EHK-----------------------VLEDKIVQEYKKF-------RKRYPG-------- 360
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
Y E K R EYLH KLSHIK L+ + N
Sbjct: 361 ------YKEEK---------HRCEYLHQKLSHIKGLILESEGKNW 390
>gi|403303437|ref|XP_003942333.1| PREDICTED: RNA polymerase II elongation factor ELL [Saimiri
boliviensis boliviensis]
Length = 621
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ T GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLTQGS 564
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ T GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLTQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|126323471|ref|XP_001362873.1| PREDICTED: RNA polymerase II elongation factor ELL isoform 1
[Monodelphis domestica]
Length = 611
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 482 GTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFT 541
Query: 64 SLQNQLRRETPGS 76
L +L++ + GS
Sbjct: 542 QLDAELKQLSQGS 554
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L +L++ + GS ++ + I++EY + KT+ + + R EYLHN
Sbjct: 531 ARIERITRRFTQLDAELKQLSQGSEEYETTRGQILQEYWKIKKTNTNYSQEKYRCEYLHN 590
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIKKL+ YD L+
Sbjct: 591 KLAHIKKLIAEYDQRQLQ 608
>gi|449282906|gb|EMC89641.1| RNA polymerase II elongation factor ELL2, partial [Columba livia]
Length = 539
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 14 TSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRET 73
T++ P Y Y IV EQR+ YK+DF+ Y+EY+ LHA++E+++ RF Q + T
Sbjct: 420 TTSEQPDYLVKYVAIVSYEQRQSYKDDFNAEYEEYRNLHARMESISKRFMDFDAQRKLLT 479
Query: 74 PGS 76
PGS
Sbjct: 480 PGS 482
>gi|395513209|ref|XP_003760821.1| PREDICTED: RNA polymerase II elongation factor ELL [Sarcophilus
harrisii]
Length = 594
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 465 GTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFT 524
Query: 64 SLQNQLRRETPGS 76
L +L++ + GS
Sbjct: 525 QLDAELKQLSQGS 537
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L +L++ + GS ++ + I++EY + KT+ + + R EYLHN
Sbjct: 514 ARIERITRRFTQLDAELKQLSQGSEEYETTRGQILQEYWKIKKTNTNYSQEKYRCEYLHN 573
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIKKL+ YD L+
Sbjct: 574 KLAHIKKLIAEYDQRQLQ 591
>gi|296233302|ref|XP_002761954.1| PREDICTED: RNA polymerase II elongation factor ELL, partial
[Callithrix jacchus]
Length = 560
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ T GS
Sbjct: 446 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLTQGS 503
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ T GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 480 ARIERITRRFTQLDAQLRQLTQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 539
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 540 KLAHIKRLIAEYDQRQLQ 557
>gi|392353883|ref|XP_003751624.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Rattus
norvegicus]
Length = 123
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + +RR EYLH
Sbjct: 43 ARIEQITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSREKRRCEYLHR 102
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 103 KLAHIKRLIAEYDQRQLQ 120
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 23 KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
+ Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 13 RKYPAISSSEQRQSYKNDFNAEYSEYRSLHARIEQITRRFTQLDAQLRQLSQGS 66
>gi|224087943|ref|XP_002195872.1| PREDICTED: RNA polymerase II elongation factor ELL, partial
[Taeniopygia guttata]
Length = 541
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%)
Query: 4 GFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFA 63
G S+ ++++ +P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF
Sbjct: 440 GTCNNSSVPTSTSEMPDYLLKYAAISSSEQRQSYKNDFNAEYNEYRDLHARIERITRRFT 499
Query: 64 SLQNQLRRETPGSFAHK 80
L +L++ GS +K
Sbjct: 500 QLDAKLKQLLQGSEEYK 516
>gi|189531659|ref|XP_694180.3| PREDICTED: hypothetical protein LOC565819 [Danio rerio]
Length = 593
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 55/178 (30%)
Query: 6 ATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
T + ++ LP Y Y TI D EQR+RYK DF Y EY+ L
Sbjct: 468 PNTPVTRASPDQLPDYLLKYNTITDSEQRQRYKEDFCAEYDEYRDL-------------- 513
Query: 66 QNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRR 125
H+ G+ +E+F L ++++
Sbjct: 514 -------------HERIGKVTEIF---------------------------VQLGSKIKT 533
Query: 126 ETPGSFAHKQIQDTIVREYHENKTD-RKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
+PG+ +K ++D I+ +Y + K + + ++R EYLH KLSHIK L+ YD L
Sbjct: 534 LSPGTQEYKVMEDQIMEKYKKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDQTQL 591
>gi|158259671|dbj|BAF85794.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|5729812|ref|NP_006523.1| RNA polymerase II elongation factor ELL [Homo sapiens]
gi|1706635|sp|P55199.1|ELL_HUMAN RecName: Full=RNA polymerase II elongation factor ELL; AltName:
Full=Eleven-nineteen lysine-rich leukemia protein
gi|601793|gb|AAA57120.1| ELL [Homo sapiens]
gi|29165820|gb|AAH49195.1| Elongation factor RNA polymerase II [Homo sapiens]
gi|119605114|gb|EAW84708.1| elongation factor RNA polymerase II, isoform CRA_b [Homo sapiens]
Length = 621
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|119605113|gb|EAW84707.1| elongation factor RNA polymerase II, isoform CRA_a [Homo sapiens]
Length = 605
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 491 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 548
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 525 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 584
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 585 KLAHIKRLIAEYDQRQLQ 602
>gi|397493869|ref|XP_003817818.1| PREDICTED: RNA polymerase II elongation factor ELL [Pan paniscus]
Length = 621
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|384949640|gb|AFI38425.1| RNA polymerase II elongation factor ELL [Macaca mulatta]
Length = 621
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|355703328|gb|EHH29819.1| Eleven-nineteen lysine-rich leukemia protein [Macaca mulatta]
Length = 621
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|395756831|ref|XP_002834488.2| PREDICTED: RNA polymerase II elongation factor ELL-like [Pongo
abelii]
Length = 406
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 260 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 317
>gi|426387822|ref|XP_004060361.1| PREDICTED: RNA polymerase II elongation factor ELL [Gorilla gorilla
gorilla]
Length = 564
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 450 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 507
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 484 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 543
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 544 KLAHIKRLIAEYDQRQLQ 561
>gi|395503561|ref|XP_003756133.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Sarcophilus
harrisii]
Length = 392
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A++ V+ RF L +++R G+ HK ++D IV+EY + K +++ R+R EYLH
Sbjct: 315 ARVGAVSRRFMQLGMEIKRVQRGTPEHKVLEDKIVQEYKKFRKRCPGYKEERQRCEYLHQ 374
Query: 166 KLSHIKKLVFIYDSNN 181
KLSHIK L+ ++ N
Sbjct: 375 KLSHIKSLILEFEKNG 390
>gi|62087168|dbj|BAD92031.1| elongation factor RNA polymerase II variant [Homo sapiens]
Length = 565
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 451 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 508
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 485 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 544
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 545 KLAHIKRLIAEYDQRQLQ 562
>gi|998549|gb|AAB34056.1| MEN chimeric transcription factor [Homo sapiens]
Length = 576
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 462 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 519
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 496 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 555
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 556 KLAHIKRLIAEYDQRQLQ 573
>gi|355755623|gb|EHH59370.1| hypothetical protein EGM_09458, partial [Macaca fascicularis]
Length = 576
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 462 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 519
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 496 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 555
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 556 KLAHIKRLIAEYDQRQLQ 573
>gi|109123965|ref|XP_001115395.1| PREDICTED: RNA polymerase II elongation factor ELL [Macaca mulatta]
Length = 573
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 459 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 516
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 493 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 552
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 553 KLAHIKRLIAEYDQRQLQ 570
>gi|395837812|ref|XP_003791823.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Otolemur
garnettii]
Length = 397
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 64/164 (39%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 284 VPDYLLQYKAIHNAEQQHAYERDFETDYAEYRILHARVGAASQRFVELGTEIKRVQRGTP 343
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 344 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 365
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 366 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 394
>gi|402904807|ref|XP_003915230.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Papio
anubis]
Length = 573
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 459 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 516
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 493 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 552
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 553 KLAHIKRLIAEYDQRQLQ 570
>gi|301605344|ref|XP_002932307.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Xenopus
(Silurana) tropicalis]
Length = 608
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 11 SNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
S S S +P Y K Y I +QR+ Y+ DF+ Y EY LHAKI V RF L +++
Sbjct: 489 SASPSAEIPDYCKKYRPITSADQRQVYEKDFTADYTEYLELHAKIGKVQDRFVRLGAKMK 548
Query: 71 RETPGSFAHKAQGR 84
+ G+ HK G+
Sbjct: 549 KLQQGTVEHKMVGK 562
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENK-TDRKFEDCRRRFEYLHN 165
AKI V RF L ++++ G+ HK + I+ EY + K T + + + + EYLH+
Sbjct: 531 AKIGKVQDRFVRLGAKMKKLQQGTVEHKMVGKKILAEYKKFKMTYPGYREEKAKCEYLHH 590
Query: 166 KLSHIKKLVFIYDSN 180
KLSHIK+L+ Y+ N
Sbjct: 591 KLSHIKQLILEYEKN 605
>gi|410222566|gb|JAA08502.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410259612|gb|JAA17772.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410294514|gb|JAA25857.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410352777|gb|JAA42992.1| elongation factor RNA polymerase II [Pan troglodytes]
Length = 621
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 507 PDYLLRYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 564
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 541 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 600
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 601 KLAHIKRLIAEYDQRQLQ 618
>gi|380794765|gb|AFE69258.1| RNA polymerase II elongation factor ELL, partial [Macaca mulatta]
Length = 290
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
P Y Y I EQR+ YKNDF+ Y EY+ LHA+IE + RF L QLR+ + GS
Sbjct: 176 PDYLLKYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLSQGS 233
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A+IE + RF L QLR+ + GS ++ + I++EY + KT+ + + R EYLH+
Sbjct: 210 ARIERITRRFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHS 269
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 270 KLAHIKRLIAEYDQRQLQ 287
>gi|344296949|ref|XP_003420163.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Loxodonta
africana]
Length = 396
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 315 ILHARVGAASQRFMELGAEIKRVQRGTPEHKVLEDKIVKEYKKFRKRYPGYREDKRRCEY 374
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 375 LHQKLSHIKGLILEFEEKN 393
>gi|74000351|ref|XP_544650.2| PREDICTED: RNA polymerase II elongation factor ELL3 [Canis lupus
familiaris]
Length = 397
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L +++R
Sbjct: 284 VPDYLLQYRAIHSAEQQHAYEQDFETDYTEYRILHARVGAASQRFIELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 338 ---------------------------------------------VQRGTP---EYKMLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+ IV+EY + K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 EKIVQEYKKFRKRYPGYREEKRRCEYLHQKLSHIKGLILEFEEKN 394
>gi|149023099|gb|EDL79993.1| rCG26262, isoform CRA_a [Rattus norvegicus]
Length = 298
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 217 ILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYKKFRKRYPSYSEEKRRCEY 276
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 277 LHEKLSHIKGLILEFEEKN 295
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 23 KDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKA 81
+ Y+TI EQ++ Y+ DF Y EY++LHA++ + RF L +++R G+ HK
Sbjct: 190 RQYSTIHSAEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGAEIKRLQRGTPEHKV 248
>gi|58865484|ref|NP_001011957.1| RNA polymerase II elongation factor ELL3 [Rattus norvegicus]
gi|54038782|gb|AAH84693.1| Elongation factor RNA polymerase II-like 3 [Rattus norvegicus]
Length = 387
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 306 ILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYKKFRKRYPSYSEEKRRCEY 365
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 366 LHEKLSHIKGLILEFEEKN 384
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 1 MKRGFATTSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVA 59
+++ + S S S S +P Y Y+TI EQ++ Y+ DF Y EY++LHA++ +
Sbjct: 256 LEQSLSVQSASESPSPEEVPDYLLQYSTIHSAEQQQAYEQDFETDYAEYRILHARVGAAS 315
Query: 60 SRFASLQNQLRRETPGSFAHKA 81
RF L +++R G+ HK
Sbjct: 316 QRFTELGAEIKRLQRGTPEHKV 337
>gi|199599758|gb|ACH91023.1| elongation factor RNA polymerase II-like 3 (predicted) [Otolemur
garnettii]
Length = 140
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 62/164 (37%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 27 VPDYLLQYKAIHNAEQQHAYERDFETDYAEYRILHARVGAASQRFVELGTEIKRVQRGTP 86
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + + + R+ PG
Sbjct: 87 EHK------------------------------VLEEKIVQEYKKFRKRYPG-------- 108
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 109 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 137
>gi|194206715|ref|XP_001918287.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Equus
caballus]
Length = 395
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 282 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGAASQRFVELGAEIKRVQRGTP 341
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 342 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 363
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 364 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 392
>gi|296213821|ref|XP_002753433.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Callithrix
jacchus]
gi|166183781|gb|ABY84146.1| elongation factor RNA polymerase II-like 3 (predicted) [Callithrix
jacchus]
Length = 398
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 317 ILHARVGAASQRFIELGAEIKRVQQGTPEHKVLEDKIVQEYKKFRKRYPGYREEKRRCEY 376
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 377 LHQKLSHIKGLILEFEEKN 395
>gi|158297841|ref|XP_318017.4| AGAP004795-PA [Anopheles gambiae str. PEST]
gi|157014520|gb|EAA13291.5| AGAP004795-PA [Anopheles gambiae str. PEST]
Length = 639
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 54/155 (34%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
+T I +EQRRRYK +F YKEY+ LH +E + +FA ++ L E +
Sbjct: 526 FTRITSVEQRRRYKTEFDNEYKEYRRLHEVLENASRKFAQYEDDLSHEPKDT-------- 577
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
R+ +Q ++ +E SF
Sbjct: 578 -----------------------------QRYKEIQLKILKEYERSFK------------ 596
Query: 145 HENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDS 179
+ KF+ + RF YLH KLSHIK LV YD+
Sbjct: 597 -----NVKFQQDKERFNYLHKKLSHIKLLVRDYDT 626
>gi|169409567|gb|ACA57911.1| elongation factor RNA polymerase II-like 3 (predicted) [Callicebus
moloch]
Length = 399
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 318 ILHARVGAASQRFIELGAEIKRVQQGTPEHKVLEDKIVQEYKKFRKRYPGYREEKRRCEY 377
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 378 LHQKLSHIKGLILEFEEKN 396
>gi|403274426|ref|XP_003928977.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Saimiri
boliviensis boliviensis]
Length = 398
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + +RR EY
Sbjct: 317 ILHARVGAASQRFIELGAEIKRVQQGTPEHKVLEDKIVQEYKKFRKRYPGYREEKRRCEY 376
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 377 LHQKLSHIKGLILEFEEKN 395
>gi|148696109|gb|EDL28056.1| elongation factor RNA polymerase II-like 3, isoform CRA_a [Mus
musculus]
Length = 313
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 48/158 (30%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
Y I EQ++ Y+ DF Y EY++LHA++ + RF L +++R G+ HK
Sbjct: 200 YRAIHSTEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGAEIKRLQRGTPEHKF--- 256
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
C F++ ++D IV+EY
Sbjct: 257 -----------CVTVFQV---------------------------------LEDKIVQEY 272
Query: 145 HE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+ K + + + R EYLH KLSHIK L+ ++ N
Sbjct: 273 KKFRKRYPSYREEKHRCEYLHQKLSHIKGLILEFEEKN 310
>gi|431896061|gb|ELK05479.1| RNA polymerase II elongation factor ELL3 [Pteropus alecto]
Length = 397
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 55/165 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQR Y+ DF Y EY++LHA++ + +F L +++R
Sbjct: 284 VPDYLLQYGAIHSTEQRHAYEKDFETDYAEYRILHARVGAASQKFMELGAEIKR------ 337
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++R TP +K ++
Sbjct: 338 ---------------------------------------------VQRGTP---EYKVLE 349
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
+ IV EY K + + +RR EYLH KLSHIK L+ ++ N
Sbjct: 350 EKIVHEYKRFRKRHPGYREEKRRCEYLHLKLSHIKGLILEFEEKN 394
>gi|126281927|ref|XP_001365867.1| PREDICTED: RNA polymerase II elongation factor ELL3-like
[Monodelphis domestica]
Length = 389
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
A++ V+ RF L +++R G+ HK ++D IV+EY + K +++ ++R EYLH
Sbjct: 312 ARVGAVSRRFMQLGMEIKRVQRGTPEHKVLEDKIVQEYRKFRKRCPGYKEEKQRCEYLHQ 371
Query: 166 KLSHIKKLVFIYDSN 180
KLSHIK L+ ++ N
Sbjct: 372 KLSHIKSLILEFEKN 386
>gi|410926659|ref|XP_003976795.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 376
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 5/75 (6%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCR---RRFEYL 163
++I T+ F L ++++ +PG+ +K ++D I+ +Y NK +KF R +R EYL
Sbjct: 298 SRIATITHMFVKLGSKIKSLSPGTPEYKMMEDQILEQY--NKYQKKFPGYREEKKRCEYL 355
Query: 164 HNKLSHIKKLVFIYD 178
H KLS+IK+L+ YD
Sbjct: 356 HEKLSYIKQLIVDYD 370
>gi|301754765|ref|XP_002913223.1| PREDICTED: RNA polymerase II elongation factor ELL3-like
[Ailuropoda melanoleuca]
Length = 397
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 284 VPDYLLQYRAIHSAEQQHAYEQDFETDYTEYRILHARVGAASQRFIELGAEIKRVQRGTP 343
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 344 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 365
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 366 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 394
>gi|443692223|gb|ELT93871.1| hypothetical protein CAPTEDRAFT_226667 [Capitella teleta]
Length = 606
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P + + Y I +QR++YK DF+ Y+EY+ LHAKI+ V+++F +L +++RE GS
Sbjct: 494 PDFVRQYPNIRSGDQRQKYKKDFNAEYEEYRQLHAKIDRVSNKFRTLVEKIQREEKGSAG 553
Query: 79 HK 80
++
Sbjct: 554 YE 555
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNK 166
AKI+ V+++F +L +++RE GS ++ ++ I EY K + K+ + R+R +YL+ K
Sbjct: 528 AKIDRVSNKFRTLVEKIQREEKGSAGYENMKSHIFMEYQTVKNNPKYLEQRKRCDYLYKK 587
Query: 167 LSHIKKLVFIYD 178
L HIKK + +D
Sbjct: 588 LGHIKKQITEFD 599
>gi|281338171|gb|EFB13755.1| hypothetical protein PANDA_001008 [Ailuropoda melanoleuca]
Length = 401
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 288 VPDYLLQYRAIHSAEQQHAYEQDFETDYTEYRILHARVGAASQRFIELGAEIKRVQRGTP 347
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 348 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 369
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 370 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 398
>gi|226875266|gb|ACO89006.1| elongation factor RNA polymerase II-like 3 (predicted), 3 prime
[Dasypus novemcinctus]
Length = 358
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I +EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 245 VPDYLLQYRAIHTIEQQHAYEQDFERDYTEYRVLHARVGAASQRFIELGAEIKRVQRGTP 304
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F ++ PG
Sbjct: 305 EHK-----------------------VLEEKIVLEYKKF-------KKRYPG-------- 326
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 327 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 355
>gi|354471705|ref|XP_003498081.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Cricetulus
griseus]
Length = 391
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + ++R EY
Sbjct: 310 ILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYRKFRKRYPSYREEKQRCEY 369
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 370 LHQKLSHIKGLILEFEEKN 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ + + +P Y Y I EQ++ Y+ DF Y EY++LHA++ + RF L
Sbjct: 268 TASESPSPEEVPDYLLQYRAIHSAEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGA 327
Query: 68 QLRRETPGSFAHKA 81
+++R G+ HK
Sbjct: 328 EIKRLQRGTPEHKV 341
>gi|432110995|gb|ELK34467.1| RNA polymerase II elongation factor ELL [Myotis davidii]
Length = 506
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHN 165
+IE + RF L QL + + GS +K + I++EY + KT+ + + +EYLH+
Sbjct: 426 VRIEQITQRFTQLDTQLWQLSQGSKEYKTTRGQILQEYRKIKKTNTNYSQEKHWWEYLHS 485
Query: 166 KLSHIKKLVFIYDSNNLK 183
KL+HIK+L+ YD L+
Sbjct: 486 KLAHIKRLIAEYDQWQLQ 503
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 38 KNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
KNDF+ Y EYQ LH +IE + RF L QL + + GS +K
Sbjct: 411 KNDFNAQYSEYQDLHVRIEQITQRFTQLDTQLWQLSQGSKEYK 453
>gi|260813627|ref|XP_002601518.1| hypothetical protein BRAFLDRAFT_95758 [Branchiostoma floridae]
gi|229286816|gb|EEN57530.1| hypothetical protein BRAFLDRAFT_95758 [Branchiostoma floridae]
Length = 614
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 9 STSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
S + STS +P Y Y I +QR+ YK DF+ Y+EY+ L+A I+ V+ RF++L+ +
Sbjct: 494 SVATSTSE-MPTYISHYPPISKYDQRQSYKMDFNREYEEYKQLYANIQKVSQRFSNLEAE 552
Query: 69 LRRETPGSFAHK 80
LR+ GS +K
Sbjct: 553 LRKLPEGSNNYK 564
>gi|35901198|ref|NP_666085.2| RNA polymerase II elongation factor ELL3 [Mus musculus]
gi|48428045|sp|Q80VR2.1|ELL3_MOUSE RecName: Full=RNA polymerase II elongation factor ELL3
gi|28175443|gb|AAH45151.1| Elongation factor RNA polymerase II-like 3 [Mus musculus]
gi|148696110|gb|EDL28057.1| elongation factor RNA polymerase II-like 3, isoform CRA_b [Mus
musculus]
Length = 395
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEY 162
I A++ + RF L +++R G+ HK ++D IV+EY + K + + + R EY
Sbjct: 314 ILHARVGAASQRFTELGAEIKRLQRGTPEHKVLEDKIVQEYKKFRKRYPSYREEKHRCEY 373
Query: 163 LHNKLSHIKKLVFIYDSNN 181
LH KLSHIK L+ ++ N
Sbjct: 374 LHQKLSHIKGLILEFEEKN 392
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ++ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 282 VPDYLLQYRAIHSTEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGAEIKRLQRGTP 341
Query: 78 AHKA 81
HK
Sbjct: 342 EHKV 345
>gi|194034839|ref|XP_001928178.1| PREDICTED: RNA polymerase II elongation factor ELL3 [Sus scrofa]
Length = 397
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ++ Y+ DF Y EY++LHA++ + RF L +L++ G+
Sbjct: 284 VPDYLLQYRAIHSAEQQQAYEQDFEIDYAEYRILHARVGAASQRFIELGAELKKVQRGTS 343
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 344 EHK-----------------------VLEEKIIQEYKKF-------RKRYPG-------- 365
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K+ R EYLH KLSHIK L+ ++ N
Sbjct: 366 ------YREEKS---------RCEYLHQKLSHIKGLILEFEEKN 394
>gi|432875489|ref|XP_004072867.1| PREDICTED: MARVEL domain-containing protein 2-like [Oryzias
latipes]
Length = 571
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 52/158 (32%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
Y Y +I E R RYK F++ Y EY+ +H ++E +A +F + +
Sbjct: 462 YIVKYPSIHSAEDRDRYKAVFTDQYAEYRDIHKEVEVMAKKFEEMDRMM----------- 510
Query: 81 AQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTI 140
+ +ASR P S ++ + I
Sbjct: 511 -----------------------------QDLASR------------PSSQMEQERINKI 529
Query: 141 VREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++EY K D + + R R EYL NKLSHIK+ + YD
Sbjct: 530 LKEYQMKKADPTYLEKRDRCEYLKNKLSHIKQKIQEYD 567
>gi|432852932|ref|XP_004067457.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 453
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y Y I LEQR++Y+ DF Y EY+ LH++I T+ F L ++++ +PG+
Sbjct: 356 PDYVLKYAPIASLEQRQKYEEDFCAEYDEYKDLHSRIATITRMFVHLSSKIKSLSPGTQE 415
Query: 79 HK 80
+K
Sbjct: 416 YK 417
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNK 166
++I T+ F L ++++ +PG+ +K+ Y E K +R EYLH K
Sbjct: 390 SRIATITRMFVHLSSKIKSLSPGTQEYKKFPG-----YREEK---------KRCEYLHEK 435
Query: 167 LSHIKKLVFIYD 178
LS+IK+L+ YD
Sbjct: 436 LSYIKQLIIDYD 447
>gi|440908645|gb|ELR58642.1| RNA polymerase II elongation factor ELL3 [Bos grunniens mutus]
Length = 395
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L ++ G+
Sbjct: 282 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVAAASQRFIELAAEMNNVQRGTP 341
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HKA + + + R+ PG
Sbjct: 342 EHKA------------------------------LEEKIVQEYKKFRKRYPG-------- 363
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 364 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 392
>gi|296475198|tpg|DAA17313.1| TPA: elongation factor RNA polymerase II-like 3 [Bos taurus]
Length = 395
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L ++ G+
Sbjct: 282 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVAAASQRFIELAAEMNNVQRGTP 341
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HKA + + + R+ PG
Sbjct: 342 EHKA------------------------------LEEKIVQEYKKFRKRYPG-------- 363
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 364 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 392
>gi|350595944|ref|XP_003484209.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Sus
scrofa]
Length = 609
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 55/92 (59%)
Query: 3 RGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRF 62
+G +S S+++ +P Y +Y TI +QR+RY+ +F E ++EY +L+ K+ T++S F
Sbjct: 481 KGVCASSGKTSSASEIPDYLTNYVTIASSQQRQRYEQEFREDFEEYNVLYNKMLTLSSIF 540
Query: 63 ASLQNQLRRETPGSFAHKAQGRGSELFHAKME 94
L ++ ++ +P S ++ + L + KM+
Sbjct: 541 VYLSSKRKQFSPDSKEYQDINKEITLEYQKMK 572
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 108 KIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYH---ENKTDRKFEDCRRRFEYLH 164
K+ T++S F L ++ ++ +P S ++ I I EY E E CR YL+
Sbjct: 532 KMLTLSSIFVYLSSKRKQFSPDSKEYQDINKEITLEYQKMKEKNPTYSAEKCR--CLYLY 589
Query: 165 NKLSHIKKLVFIYD 178
NKL HIK LV YD
Sbjct: 590 NKLVHIKMLVNNYD 603
>gi|114050927|ref|NP_001039591.1| RNA polymerase II elongation factor ELL3 [Bos taurus]
gi|86438368|gb|AAI12767.1| Elongation factor RNA polymerase II-like 3 [Bos taurus]
Length = 395
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L ++ G+
Sbjct: 282 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVAAASQRFIELAAEMNNVQRGTP 341
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HKA + + + R+ PG
Sbjct: 342 EHKA------------------------------LEEKIVQEYKKFRKRYPG-------- 363
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 364 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 392
>gi|284005550|ref|NP_001164787.1| RNA polymerase II elongation factor ELL3 [Oryctolagus cuniculus]
gi|217030874|gb|ACJ74035.1| RNA polymerase II elongation factor ELL3 (predicted) [Oryctolagus
cuniculus]
Length = 385
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 53/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I +EQ++ Y+ DF Y EY+ LHA++ + RF L +++R GS
Sbjct: 272 VPDYLLQYKAIHSVEQQQAYEQDFETDYAEYRTLHARVGAASQRFIELGAEIKRVQRGSP 331
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+K + KI +F R+ PG
Sbjct: 332 EYK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 353
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Y E K RR EYLH KLSHIK L+ ++
Sbjct: 354 ------YREEK---------RRCEYLHQKLSHIKGLILEFE 379
>gi|122064339|sp|Q0IHQ3.1|MALD2_XENTR RecName: Full=MARVEL domain-containing protein 2
gi|114108252|gb|AAI23027.1| mrvldc2 protein [Xenopus (Silurana) tropicalis]
Length = 568
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F++ + EY+ LHA+++ V +F+ L
Sbjct: 450 MPDYVAKYQAIKAEDERERYKAVFNDQFAEYKELHAEVQAVMKKFSELD----------- 498
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++ +L R +++I
Sbjct: 499 ----------------------------------------AVMQKLPRNPENQHEYERIA 518
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+++EY + K + F + + R EYL NKLSHIK+ + YD
Sbjct: 519 -KVLQEYQKKKNEPTFLEKKERCEYLKNKLSHIKQRIQEYD 558
>gi|62859777|ref|NP_001017292.1| MARVEL domain-containing protein 2 [Xenopus (Silurana) tropicalis]
gi|89273909|emb|CAJ83822.1| MARVEL domain containing 2 [Xenopus (Silurana) tropicalis]
Length = 568
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F++ + EY+ LHA+++ V +F+ L
Sbjct: 450 MPDYVAKYQAIKAEDERERYKAVFNDQFAEYKELHAEVQAVMKKFSELD----------- 498
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
++ +L R +++I
Sbjct: 499 ----------------------------------------AVMQKLPRNPENQHEYERIA 518
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+++EY + K + F + + R EYL NKLSHIK+ + YD
Sbjct: 519 -KVLQEYQKKKNEPTFLEKKERCEYLKNKLSHIKQRIQEYD 558
>gi|426248860|ref|XP_004018175.1| PREDICTED: RNA polymerase II elongation factor ELL3, partial [Ovis
aries]
Length = 383
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 61/164 (37%), Gaps = 53/164 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L ++ G+
Sbjct: 270 VPDYLLQYRAIHSAEQQHAYEQDFETDYAEYRILHARVGAASQRFIELAAEMNNVQRGTP 329
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
HK + KI +F R+ PG
Sbjct: 330 EHK-----------------------VLEEKIVQEYKKF-------RKRYPG-------- 351
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNN 181
Y E K RR EYLH KLSHIK L+ ++ N
Sbjct: 352 ------YREEK---------RRCEYLHQKLSHIKGLILEFEEKN 380
>gi|68355064|ref|XP_687068.1| PREDICTED: MARVEL domain-containing protein 2 [Danio rerio]
Length = 545
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 62/163 (38%), Gaps = 52/163 (31%)
Query: 16 TFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPG 75
+P Y Y I EQR +YK F++ Y EY+ LH +++ V +F +
Sbjct: 423 VIMPDYVAKYPAIRTDEQRDQYKAVFNDQYSEYKELHVEVQAVLKKFDEMD--------- 473
Query: 76 SFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQ 135
+QN + P S+ +
Sbjct: 474 -----------------------------------------VMMQN--LPQNPTSYTERD 490
Query: 136 IQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+++Y + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 491 RINKILQDYQKKKMDPSFLEKKERCEYLKNKLSHIKQRIHEYD 533
>gi|327263139|ref|XP_003216378.1| PREDICTED: MARVEL domain-containing protein 2-like [Anolis
carolinensis]
Length = 548
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I E+R RYK F++ + EY+ L A+++ V +F L +R+
Sbjct: 433 MPDYLAKYPAIRTNEERDRYKAVFNDQFAEYKELSAEVQAVLKKFDELDGLMRK------ 486
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
L R+ + H +I+
Sbjct: 487 ---------------------------------------------LPRQPGNTLEHDRIE 501
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ ++++Y + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 502 N-VLQQYKKKKNDPTFLEKKERCEYLKNKLSHIKQRIQEYD 541
>gi|426258254|ref|XP_004022730.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Ovis
aries]
Length = 602
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 54/174 (31%)
Query: 6 ATTSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
T T S ST LP Y Y TI+ EQR RY+ +F Y+EY+ LH K+ + F
Sbjct: 480 VCTPTGKSCSTSELPDYLTSYVTIISSEQRERYEQEFRVDYEEYKALHEKLLPFSKIFVF 539
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L +Q + P S ++ + L + KM
Sbjct: 540 LTSQKEQFPPDSREYEDINKKISLEYQKM------------------------------- 568
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
++ + N + KF R +YL+NKL+HIK L+ YD
Sbjct: 569 -----------------KQMNHNYFEEKF-----RCQYLYNKLAHIKDLINSYD 600
>gi|410989541|ref|XP_004001019.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Felis
catus]
Length = 662
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 53/174 (30%)
Query: 5 FATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
T S +++ P Y Y T+V LEQR+ Y +F Y EYQ LH K+ +++ F
Sbjct: 534 VCTASGETWSASGCPDYLAHYVTVVSLEQRQHYAQEFRAEYDEYQALHTKMLSLSRIFTK 593
Query: 65 LQNQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLR 124
L Q + +P S ++ + L + KM+ C
Sbjct: 594 LDFQRKHLSPDSKEYQEINKKISLEYEKMK--CI-------------------------- 625
Query: 125 RETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
P KQ R YL+NKL+HIK+L+ YD
Sbjct: 626 --NPNYGGEKQ-----------------------RCLYLYNKLAHIKRLIKDYD 654
>gi|348543191|ref|XP_003459067.1| PREDICTED: MARVEL domain-containing protein 2-like [Oreochromis
niloticus]
Length = 615
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 52/160 (32%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
Y Y +I E+R +YK F++ Y EY+ LHA+++ +
Sbjct: 501 YVAKYPSIYTDEERDQYKAVFNDQYAEYKELHAEVQAM---------------------- 538
Query: 81 AQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTI 140
A K E + A+L ++ P S K+ + I
Sbjct: 539 -------------------------AKKFEEMDEMMANLPSR-----PSSQMEKERINGI 568
Query: 141 VREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSN 180
+ EY K D + + R R EYL NKLSHIK+ + Y+ +
Sbjct: 569 LMEYQRKKADPTYLEKRERCEYLKNKLSHIKQKIQEYNKS 608
>gi|281343280|gb|EFB18864.1| hypothetical protein PANDA_013909 [Ailuropoda melanoleuca]
Length = 592
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 53/177 (29%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T S + P Y +Y TI +QR++Y+ +F Y EYQ L+ KI T+++ F +L
Sbjct: 469 TASGETGAAPGRPDYLANYVTIRSSKQRQQYEQEFRLEYDEYQGLYDKILTLSTIFINLD 528
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
++ + +PGS ++ + L + KM
Sbjct: 529 SKRKHLSPGSKEYQDISKKISLEYQKM--------------------------------- 555
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
KQ+ E H R +YL++KL HIKKL+ YD ++K
Sbjct: 556 -------KQMNPNYCAEKH-------------RCQYLYDKLVHIKKLISDYDQQHVK 592
>gi|301778247|ref|XP_002924541.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ailuropoda melanoleuca]
Length = 626
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 71/177 (40%), Gaps = 53/177 (29%)
Query: 7 TTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T S + P Y +Y TI +QR++Y+ +F Y EYQ L+ KI T+++ F +L
Sbjct: 502 TASGETGAAPGRPDYLANYVTIRSSKQRQQYEQEFRLEYDEYQGLYDKILTLSTIFINLD 561
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
++ + +PGS ++ + L + KM
Sbjct: 562 SKRKHLSPGSKEYQDISKKISLEYQKM--------------------------------- 588
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
KQ+ E H R +YL++KL HIKKL+ YD ++K
Sbjct: 589 -------KQMNPNYCAEKH-------------RCQYLYDKLVHIKKLISDYDQQHVK 625
>gi|432884586|ref|XP_004074504.1| PREDICTED: MARVEL domain-containing protein 2-like [Oryzias
latipes]
Length = 555
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I E++ RY+ F++ Y EY+ LH+ ++ +F +
Sbjct: 437 VPDYIAKYPAIRSSEEKDRYRAVFNDQYSEYKELHSDVQATLKKFEEMD----------- 485
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
A I+T+ S Q +L R IQ
Sbjct: 486 -----------------------------AMIQTLPQHPTS-QMELER----------IQ 505
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I+++Y KTD F + + R EYL NKLSHIK+ + Y+
Sbjct: 506 -RILQDYQRKKTDPTFLEKKERCEYLKNKLSHIKQKIQEYE 545
>gi|81294356|gb|AAI08071.1| LOC558720 protein [Danio rerio]
Length = 238
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 62/164 (37%), Gaps = 52/164 (31%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
+P Y Y I EQR +YK F++ Y EY+ LH +++ V +F +
Sbjct: 115 PVIMPDYVAKYPAIRTDEQRDQYKAVFNDQYSEYKELHVEVQAVLKKFDEMD-------- 166
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHK 134
+QN + T S+ +
Sbjct: 167 ------------------------------------------VMMQNLPQNPT--SYTER 182
Query: 135 QIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I+++Y + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 183 DRINKILQDYQKKKMDPSFLEKKERCEYLKNKLSHIKQRIHEYD 226
>gi|344241099|gb|EGV97202.1| RNA polymerase II elongation factor ELL3 [Cricetulus griseus]
Length = 299
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T++ + + +P Y Y I EQ++ Y+ DF Y EY++LHA++ + RF L
Sbjct: 191 TASESPSPEEVPDYLLQYRAIHSAEQQQAYEQDFETDYAEYRILHARVGAASQRFTELGA 250
Query: 68 QLRRETPGSFAHK 80
+++R G+ HK
Sbjct: 251 EIKRLQRGTPEHK 263
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYL 163
I A++ + RF L +++R G+ HK+ Y E K +R EYL
Sbjct: 233 ILHARVGAASQRFTELGAEIKRLQRGTPEHKRYPS-----YREEK---------QRCEYL 278
Query: 164 HNKLSHIKKLVFIYDSNN 181
H KLSHIK L+ ++ N
Sbjct: 279 HQKLSHIKGLILEFEEKN 296
>gi|291190518|ref|NP_001167127.1| MARVEL domain-containing protein 2 [Salmo salar]
gi|223648274|gb|ACN10895.1| MARVEL domain-containing protein 2 [Salmo salar]
Length = 575
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 107 AKIETVASRFASLQNQLRR--ETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYLH 164
A ++ +F L +R + P S + I++EY K D F++ R R EYL
Sbjct: 492 ADVQATTRKFDELDAMMRALPQHPNSQMEYDRVNKILQEYQRKKNDPTFQEKRERCEYLK 551
Query: 165 NKLSHIKKLVFIYD 178
NKL+HIK+ + YD
Sbjct: 552 NKLAHIKQKIHEYD 565
>gi|355685839|gb|AER97866.1| elongation factor RNA polymerase II-like 3 [Mustela putorius furo]
Length = 358
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I EQ+ Y+ DF Y EY++LHA++ + RF L +++R G+
Sbjct: 283 VPDYVLQYRAICSAEQQHAYEQDFETDYTEYRILHARVGAASQRFIELGAEIKRVQRGTP 342
Query: 78 AHKA 81
HK
Sbjct: 343 EHKV 346
>gi|444522493|gb|ELV13393.1| RNA polymerase II elongation factor ELL3 [Tupaia chinensis]
Length = 373
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I +EQ+ Y+ DF Y EY++LHA+I + RF L +++R G+
Sbjct: 275 VPDYFLQYRAIHSVEQQHAYEQDFETDYAEYRILHARIGAASQRFTELGTEIKRVQRGTP 334
Query: 78 AHK 80
HK
Sbjct: 335 EHK 337
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 104 IAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYL 163
I A+I + RF L +++R G+ HK+ + D +RR EYL
Sbjct: 307 ILHARIGAASQRFTELGTEIKRVQRGTPEHKRYP--------------GYRDEKRRCEYL 352
Query: 164 HNKLSHIKKLVFIYDSNN 181
H KLSHIK L+ ++ N
Sbjct: 353 HQKLSHIKGLILEFEEKN 370
>gi|432863306|ref|XP_004070072.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 599
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%)
Query: 8 TSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQN 67
T + +++ +P Y Y++I L+ R++Y +DF Y EY+ LH +I + F L +
Sbjct: 476 TPVNGTSAEEVPDYLIKYSSITSLDLRQQYSSDFCAEYDEYRALHDRIGAITEMFVQLGS 535
Query: 68 QLRRETPGSFAHK 80
++ +PG+ +K
Sbjct: 536 KINTLSPGTQEYK 548
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 108 KIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRK-FEDCRRRFEYLHNK 166
+I + F L +++ +PG+ +K +++ I+++Y + K +++ ++R EYLH K
Sbjct: 522 RIGAITEMFVQLGSKINTLSPGTQEYKLMEEQILQKYQKFKKKFPGYQEEKKRCEYLHKK 581
Query: 167 LSHIKKLVFIYD 178
LSHIK L+ YD
Sbjct: 582 LSHIKGLIAEYD 593
>gi|431907807|gb|ELK11414.1| MARVEL domain-containing protein 2 [Pteropus alecto]
Length = 559
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y I ++R RYK F + + EY+ L A+++ + +F L + R P S
Sbjct: 440 LPDYVAKYPMIQTDDERERYKAVFQDQFSEYKELSAEVQAILRKFDELDAVMSRLPPHS- 498
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
G++ H ++ SR
Sbjct: 499 -------GNQQEHERI--------------------SR---------------------- 509
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 510 --IHEEFKKKKKDPAFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|345304742|ref|XP_003428254.1| PREDICTED: MARVEL domain-containing protein 2 [Ornithorhynchus
anatinus]
Length = 564
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + +
Sbjct: 445 MPDYVAKYPVIQTDDERERYKAVFKDQFSEYKELSAEVQAVLRKFDELDAMMSK-----L 499
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H + R H++I
Sbjct: 500 PHHPENREE----------------------------------------------HERIA 513
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I++E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 514 -KILQEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQDYD 553
>gi|348500997|ref|XP_003438057.1| PREDICTED: MARVEL domain-containing protein 2-like [Oreochromis
niloticus]
Length = 541
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 63/171 (36%), Gaps = 52/171 (30%)
Query: 12 NSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
N + Y Y I +E+R +YK F++ Y+EY+ LH I S+F L + R
Sbjct: 418 NPKVHIIADYIIKYPEISCVEEREKYKAVFNDQYQEYKDLHRDISATLSKFRELDLMMER 477
Query: 72 ETPGSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSF 131
L RET
Sbjct: 478 ---------------------------------------------------LPRETNSKE 486
Query: 132 AHKQIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNL 182
+IQ +IV++YH+ + D F + + R +YL KL HIK + +YD +
Sbjct: 487 DQHRIQ-SIVKKYHQKRNDPTFLEKKERCDYLKAKLCHIKNRIRVYDQETM 536
>gi|363744890|ref|XP_424965.3| PREDICTED: MARVEL domain-containing protein 2 [Gallus gallus]
Length = 508
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 106 AAKIETVASRFASLQNQLRRET--PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYL 163
+ ++ V +F L+ +R+ PGS ++ +++EY + K D F + + R EYL
Sbjct: 425 SVEVHAVLKKFNELEALMRQLPHHPGSIYEQERISKVLQEYEKKKNDPAFLEKKERCEYL 484
Query: 164 HNKLSHIKKLVFIYD 178
NKLSHIK+ + YD
Sbjct: 485 KNKLSHIKQRIQDYD 499
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRET--PG 75
+P Y Y I E R RYK F++ + EY+ L ++ V +F L+ +R+ PG
Sbjct: 391 MPDYLAKYPAIQTNEMRDRYKAVFNDQFAEYKELSVEVHAVLKKFNELEALMRQLPHHPG 450
Query: 76 SF 77
S
Sbjct: 451 SI 452
>gi|157821917|ref|NP_001102406.1| MARVEL domain-containing protein 2 [Rattus norvegicus]
gi|149059196|gb|EDM10203.1| MARVEL (membrane-associating) domain containing 2 (predicted)
[Rattus norvegicus]
Length = 558
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 62/161 (38%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ +F L
Sbjct: 439 MPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQATLRKFDEL------------ 486
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+TV SR ++ R+E H++I
Sbjct: 487 --------------------------------DTVMSRLPH-HSENRQE------HERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 508 -RIHEEFRKKKNDPSFLEKKERCEYLKNKLSHIKQRIQEYD 547
>gi|410903966|ref|XP_003965464.1| PREDICTED: MARVEL domain-containing protein 2-like [Takifugu
rubripes]
Length = 558
Score = 45.1 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 56/163 (34%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR--ETPG 75
LP Y Y TI E+R +Y+ F++ Y EY+ LHA+++ +F + +R + P
Sbjct: 440 LPDYIAKYPTIRTNEERDQYRAVFNDQYAEYKELHAEVQLTQKKFDEMDAMMRSLPQHPS 499
Query: 76 SFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQ 135
S +ME R + RR+
Sbjct: 500 S---------------QME------------------VDRINRILQDYRRK--------- 517
Query: 136 IQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
K D F + + R EYL +KLSHIK+ + YD
Sbjct: 518 ------------KNDPTFLEKKERCEYLKSKLSHIKQKIQEYD 548
>gi|345441809|ref|NP_001230877.1| MARVEL domain containing 2 [Sus scrofa]
Length = 559
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPMIQTDDERERYKAVFQDQFSEYKELSAEVQAVLKKFDELDAMMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H+++ + H++I
Sbjct: 495 PHRSENQQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|426246349|ref|XP_004016957.1| PREDICTED: MARVEL domain-containing protein 2 [Ovis aries]
Length = 559
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L
Sbjct: 440 MPDYVAKYPMIQTGDERERYKAVFQDQFAEYKELSAEVQAVLRKFDEL------------ 487
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 488 --------------------------------DAVMSR-------LPRRSENQQEHERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I +E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHQEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|73950129|ref|XP_544368.2| PREDICTED: MARVEL domain-containing protein 2 [Canis lupus
familiaris]
Length = 554
Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ V +F L
Sbjct: 435 MPDYVAKYPVIQTEDDRERYKAVFQDQFSEYKELSAEVQAVLRKFDEL------------ 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 483 --------------------------------DAVMSR-------LPRCSENQQEHERIS 503
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 504 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 543
>gi|355691368|gb|EHH26553.1| Tricellulin, partial [Macaca mulatta]
gi|355749971|gb|EHH54309.1| Tricellulin, partial [Macaca fascicularis]
Length = 557
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 438 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 492
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 493 PHHSESRQE----------------------------------------------HERIS 506
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 507 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 546
>gi|109077517|ref|XP_001094419.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Macaca
mulatta]
Length = 559
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 495 PHHSESRQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|47210863|emb|CAF92596.1| unnamed protein product [Tetraodon nigroviridis]
Length = 504
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 19/92 (20%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS-------- 76
+ +IVD E+R YK +F + ++EY+ L A+++ + A L Q+ GS
Sbjct: 378 FPSIVDEEERLNYKREFDQDHQEYKSLQAELDGINQELAELDTQMNTHPEGSPQFLDAME 437
Query: 77 -FAH----KAQGRG------SELFHAKMEPCC 97
+ H K G G SE F +K +PCC
Sbjct: 438 RYHHLKSIKKVGAGQCLSVSSEQFQSKKQPCC 469
>gi|355701259|gb|AES01624.1| MARVEL domain containing 2 [Mustela putorius furo]
Length = 561
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 59/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 442 MPDYVVKYPVIQTEDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR------ 495
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
P C +NQ RE
Sbjct: 496 ----------------LPRCS---------------------ENQQERERISR------- 511
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 512 --IHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 550
>gi|47229929|emb|CAG10343.1| unnamed protein product [Tetraodon nigroviridis]
Length = 574
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL 69
Y+ I QR+ YK +F++ Y EY++LHA+I+ V +F L QL
Sbjct: 438 YSVISSRHQRQSYKQEFNQDYSEYRLLHARIDDVTQQFMQLNAQL 482
>gi|109511341|ref|XP_001070647.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Rattus
norvegicus]
gi|293351257|ref|XP_002727731.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Rattus
norvegicus]
Length = 634
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 1 MKRGFATTSTSNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVAS 60
+K+ FA S T+ P+Y +Y+ IV +QR+ Y+++F Y EYQ ++ KI+ +
Sbjct: 503 VKKAFAD-SGKFVTTCGTPEYLSNYSIIVSSDQRQYYEDEFRADYSEYQAMYDKIQISCT 561
Query: 61 RFASLQNQLRRETPGS 76
L ++ + +PGS
Sbjct: 562 PIIDLDSERKGFSPGS 577
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 108 KIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHE-NKTDRKFEDCRRRFEYLHNK 166
KI+ + L ++ + +PGS ++ I I EY + + + KF + + + +L+NK
Sbjct: 555 KIQISCTPIIDLDSERKGFSPGSKEYQDITKKISIEYQKMRQLNPKFCEEKNKCVFLYNK 614
Query: 167 LSHIKKLVFIYDSNNLK 183
L HIKKL+ +D+ +K
Sbjct: 615 LIHIKKLINDFDNQKVK 631
>gi|301760265|ref|XP_002915936.1| PREDICTED: MARVEL domain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 559
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L
Sbjct: 440 MPDYVAKYPVIQTEDERERYKAVFQDQFSEYKELSAEVQAVLRKFDEL------------ 487
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 488 --------------------------------DAVMSR-------LPRCSENQQEHERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKKDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|281337666|gb|EFB13250.1| hypothetical protein PANDA_003970 [Ailuropoda melanoleuca]
Length = 557
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L
Sbjct: 438 MPDYVAKYPVIQTEDERERYKAVFQDQFSEYKELSAEVQAVLRKFDEL------------ 485
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 486 --------------------------------DAVMSR-------LPRCSENQQEHERIS 506
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 507 -RIHEEFKKKKKDPTFLEKKERCDYLKNKLSHIKQRIQEYD 546
>gi|345482824|ref|XP_003424673.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Nasonia
vitripennis]
Length = 620
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 58/161 (36%)
Query: 19 PKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFA 78
P Y YT I EQR RYK DF +KEY+ L ++ + +F L+ +L+ +
Sbjct: 501 PDYLTCYTKISSAEQRTRYKVDFYAGFKEYRKLLVQVVKIKEQFIQLEEELKNK------ 554
Query: 79 HKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQD 138
Q G+ IE + ++++Q+R+E +A
Sbjct: 555 ---QNTGN----------------------IEGI----EAIEHQIRQE----YA------ 575
Query: 139 TIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDS 179
K + R+ YLH+KL HIKKLV YD+
Sbjct: 576 -------------KRKSVYARYYYLHDKLGHIKKLVSDYDA 603
>gi|410924632|ref|XP_003975785.1| PREDICTED: MARVEL domain-containing protein 2-like [Takifugu
rubripes]
Length = 552
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 62/163 (38%), Gaps = 52/163 (31%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHK 80
Y Y I +E+R Y F++ Y+EY+ LH I + SRF L
Sbjct: 434 YIIKYPEIRCVEERETYAAVFNDQYQEYKDLHRDIISTFSRFREL--------------- 478
Query: 81 AQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTI 140
+ V SR L R+ K+IQ ++
Sbjct: 479 -----------------------------DVVMSR-------LLRDGKSPQEQKRIQ-SL 501
Query: 141 VREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYDSNNLK 183
+R Y E K+D F + + R +YL KLSHIK + +D ++
Sbjct: 502 LRTYQEKKSDPSFLEKKERCDYLKAKLSHIKNRIRTFDQETME 544
>gi|297718662|gb|ADI50266.1| elongation factor RNA polymerase II [Gobiocypris rarus]
Length = 515
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETV 58
YT I EQR+ YKNDF+ Y EY+ LH++IE++
Sbjct: 479 YTVISSQEQRQTYKNDFNAEYSEYRGLHSRIESI 512
>gi|395511367|ref|XP_003759931.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2
[Sarcophilus harrisii]
Length = 546
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L+A+++ V +F L + R
Sbjct: 427 MPDYVAKYPVIQSDDERERYKAVFKDQFSEYKELNAEVQAVLRKFDELDAVMSR-----L 481
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 482 PHHSENREE----------------------------------------------HERIS 495
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I++E+ + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 496 -RILQEFKKKKNDPTFLEKKERCEYLKNKLSHIKQRIQEYD 535
>gi|395825430|ref|XP_003785936.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 558
Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V + L
Sbjct: 439 MPDYVAKYPVIQTNDERERYKAVFQDQFAEYKELSAEVQAVLRKLDEL------------ 486
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 487 --------------------------------DAVMSR-------LPRHSENRQEHERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 508 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 547
>gi|291408560|ref|XP_002720578.1| PREDICTED: elongation factor RNA polymerase II-like [Oryctolagus
cuniculus]
Length = 595
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y TI EQR Y+ +F Y EYQ LH+KI T++ F L ++ +
Sbjct: 480 IPDYLTKYFTIASYEQRYYYEQEFRAEYGEYQALHSKILTLSRIFLDLDSKRK------- 532
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
CF P S ++
Sbjct: 533 -------------------CF----------------------------PPDSKEYQDTN 545
Query: 138 DTIVREYHE-NKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I REY + + + ++ ++R YL+NKL HIKKLV +D
Sbjct: 546 KEIAREYRKLRQRNPCYQAEKQRCLYLYNKLVHIKKLVNDFD 587
>gi|149727088|ref|XP_001504100.1| PREDICTED: MARVEL domain-containing protein 2 [Equus caballus]
Length = 559
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I +R RYK F + + EY+ L A+++ V + L
Sbjct: 440 MPDYVAKYPVIHTDGERERYKAVFQDQFSEYKELSAEVQAVLRKLDELH----------- 488
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+L ++L R H++I
Sbjct: 489 ----------------------------------------ALMSRLPRRAENQQEHERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|402871760|ref|XP_003899819.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Papio
anubis]
Length = 559
Score = 42.4 bits (98), Expect = 0.079, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V + L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKLDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 495 PHHSESRQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|47228504|emb|CAG05324.1| unnamed protein product [Tetraodon nigroviridis]
Length = 575
Score = 42.4 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 63/163 (38%), Gaps = 56/163 (34%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR--ETPG 75
LP Y Y +I E+R +Y+ F++ Y EY+ LHA+++ +F + +R + P
Sbjct: 457 LPDYIAKYPSIRTNEERDQYRAVFNDQYAEYKELHAEVQFTQKKFDEMDGMMRSLPQHPT 516
Query: 76 SFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQ 135
S +ME +I + LQ R++ SF K
Sbjct: 517 S---------------QME-----------VDRINRI------LQEYQRKKNDPSFLEK- 543
Query: 136 IQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ R EYL +KLSHIK+ + YD
Sbjct: 544 ---------------------KERCEYLKSKLSHIKQKIQEYD 565
>gi|344272623|ref|XP_003408131.1| PREDICTED: MARVEL domain-containing protein 2 [Loxodonta africana]
Length = 559
Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKLD-------------- 485
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+++ V SR +++ R+E H++I
Sbjct: 486 ------------------------------ELDAVMSRLPH-RSENRQE------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIHEYD 548
>gi|163914823|ref|NP_001106620.1| occludin/ELL domain containing 1 [Xenopus (Silurana) tropicalis]
gi|160773598|gb|AAI55468.1| LOC100127845 protein [Xenopus (Silurana) tropicalis]
Length = 163
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 59/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y I E+R YK F++ + EY+ LHA+++ ++F L + + T G
Sbjct: 47 LPDYVLKYPEIRTAEERESYKAVFNDQFSEYKELHAEVKAAMAKFKELDIMMDKLTRGP- 105
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ A +I+ +A +
Sbjct: 106 -----------------------QSKTAPERIQVIAQK---------------------- 120
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
Y + K D F + + R YL KLSHIKK + YD
Sbjct: 121 ------YEKKKNDPTFIEKKERCVYLKGKLSHIKKQIQAYD 155
>gi|358420758|ref|XP_003584723.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bos
taurus]
Length = 755
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 8 TSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T T + ST LP + Y TI EQR RY+ +F Y+EY+ LH + + F L
Sbjct: 635 TPTGKTCSTSELPDFLTSYVTITSSEQRERYEKEFRVDYEEYKALHETLMPFSKIFVYLT 694
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKM 93
+Q + P S ++ + L + KM
Sbjct: 695 SQKEKFPPDSREYEDINKKISLEYQKM 721
>gi|395511365|ref|XP_003759930.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1
[Sarcophilus harrisii]
Length = 558
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L+A+ +Q LR+
Sbjct: 439 MPDYVAKYPVIQSDDERERYKAVFKDQFSEYKELNAE----------VQAVLRK------ 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+++ V SR ++ R E H++I
Sbjct: 483 ----------------------------FDELDAVMSRLPH-HSENREE------HERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I++E+ + K D F + + R EYL NKLSHIK+ + YD
Sbjct: 508 -RILQEFKKKKNDPTFLEKKERCEYLKNKLSHIKQRIQEYD 547
>gi|359081561|ref|XP_003588145.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bos
taurus]
Length = 625
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 8 TSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T T + ST LP + Y TI EQR RY+ +F Y+EY+ LH + + F L
Sbjct: 505 TPTGKTCSTSELPDFLTSYVTITSSEQRERYEKEFRVDYEEYKALHETLMPFSKIFVYLT 564
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKM 93
+Q + P S ++ + L + KM
Sbjct: 565 SQKEKFPPDSREYEDINKKISLEYQKM 591
>gi|440904318|gb|ELR54846.1| RNA polymerase II elongation factor ELL2, partial [Bos grunniens
mutus]
Length = 601
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 8 TSTSNSTSTF-LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQ 66
T T + ST LP + Y TI EQR RY+ +F Y+EY+ LH + + F L
Sbjct: 513 TPTGKTCSTSELPDFLTSYVTITSSEQRERYEKEFRVDYEEYKALHETLMPFSKIFVYLT 572
Query: 67 NQLRRETPGSFAHKAQGRGSELFHAKM 93
+Q + P S ++ + L + KM
Sbjct: 573 SQKEKFPPDSREYEDINKKISLEYQKM 599
>gi|417402729|gb|JAA48200.1| Putative rna polymerase ii elongation factor [Desmodus rotundus]
Length = 557
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
LP Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 438 LPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 492
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H + G++ H ++ F+
Sbjct: 493 PHHS---GNQQEHERISRILEEFK------------------------------------ 513
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ K D F + + R +YL NKLSHIK+ + YD
Sbjct: 514 --------KKKKDPTFLEKKERCDYLKNKLSHIKQRIQEYD 546
>gi|156354196|ref|XP_001623286.1| predicted protein [Nematostella vectensis]
gi|156209969|gb|EDO31186.1| predicted protein [Nematostella vectensis]
Length = 516
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
Y+K Y I EQR YK DF Y+EY L KI+ V +F L+ L R
Sbjct: 457 YKKQYRPIETYEQRLLYKQDFQVEYEEYLHLKNKIDNVTKKFMELKGSLTR 507
>gi|283806707|ref|NP_848497.2| MARVEL domain-containing protein 2 isoform 2 [Mus musculus]
Length = 278
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 17 FLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 158 VMPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL----------- 206
Query: 77 FAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQI 136
+TV SR ++ R+E H++I
Sbjct: 207 ---------------------------------DTVMSRLPH-HSENRQE------HERI 226
Query: 137 QDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 227 S-RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 267
>gi|348531040|ref|XP_003453018.1| PREDICTED: MARVEL domain-containing protein 2-like [Oreochromis
niloticus]
Length = 559
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+ I++EY K D F + + R EYL NKLSHIK+ + YD
Sbjct: 509 NRILQEYQRKKNDPTFLEKKERCEYLKNKLSHIKQKIQEYD 549
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
+P Y Y I E+R +Y+ F++ Y EY+ LH++++ +F + +R
Sbjct: 441 VPDYIAKYPVIRSDEERDQYRAVFNDQYAEYKELHSEVQATLKKFDEMDAMMR 493
>gi|351703751|gb|EHB06670.1| RNA polymerase II elongation factor ELL2 [Heterocephalus glaber]
Length = 260
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 STSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVA 59
S++ LP Y Y IV E+ + +++DF+ Y EY+ L A++ETVA
Sbjct: 214 SSTIELPHYLIKYIAIVSCEKCQNFQDDFNTEYDEYRALQARMETVA 260
>gi|395754543|ref|XP_003779798.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like, partial [Pongo abelii]
Length = 491
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
+++LP Y Y TIV EQR+ Y+ +F Y Q+L AK+ ++S +L ++ +P
Sbjct: 386 TSWLPDYLXKYFTIVFSEQRQHYELEFIAEYDXXQVLCAKMLMLSSTVINLGSKRNPLSP 445
Query: 75 GS 76
GS
Sbjct: 446 GS 447
>gi|449271201|gb|EMC81727.1| MARVEL domain-containing protein 2, partial [Columba livia]
Length = 420
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 106 AAKIETVASRFASLQNQLRRET--PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYL 163
+ ++ V +F L +R+ P S ++ +++EY + K D F + + R EYL
Sbjct: 337 SVEVHAVLKKFDELDTLMRQLPHHPESVYEQERISKVLQEYRKKKNDPAFLEKKERCEYL 396
Query: 164 HNKLSHIKKLVFIYD 178
NKLSHIK+ + YD
Sbjct: 397 KNKLSHIKQRIQDYD 411
>gi|432913655|ref|XP_004078998.1| PREDICTED: MARVEL domain-containing protein 2-like [Oryzias
latipes]
Length = 564
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 59/154 (38%), Gaps = 52/154 (33%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSFAHKAQGR 84
Y I +E+R Y+ F++ Y+EY+ LH I ++F L
Sbjct: 447 YPVIRCVEERDEYRAVFNDQYQEYKELHCDITATLNKFRELD------------------ 488
Query: 85 GSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREY 144
A +E + + +L +Q R E+ I+++Y
Sbjct: 489 ----------------------AIMERLPKQRKNLMDQERIES------------ILKKY 514
Query: 145 HENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
HE K D F + + R YL KLSHIK + +D
Sbjct: 515 HEKKNDPTFLEKKERCYYLKAKLSHIKTRIQTFD 548
>gi|449514092|ref|XP_002195122.2| PREDICTED: MARVEL domain-containing protein 2 [Taeniopygia guttata]
Length = 528
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 106 AAKIETVASRFASLQNQLRRET--PGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFEYL 163
+ ++ V +F L L++ P S ++ +++EY + K D F + + R EYL
Sbjct: 445 SMEVHAVLKKFDELDALLKQLPHHPESIYEQERISKVLQEYKKKKNDPAFLEKKERCEYL 504
Query: 164 HNKLSHIKKLVFIYD 178
NKLSHIK+ + YD
Sbjct: 505 KNKLSHIKQRIQDYD 519
>gi|110735072|gb|ABG89106.1| tricellulin isoform c [Homo sapiens]
Length = 442
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 323 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 377
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 378 PHHSESRQE----------------------------------------------HERIS 391
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 392 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 431
>gi|403267399|ref|XP_003925821.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 544
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 425 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 479
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 480 PHHSESRQE----------------------------------------------HERIS 493
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 494 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 533
>gi|403267397|ref|XP_003925820.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 556
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 437 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 491
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 492 PHHSESRQE----------------------------------------------HERIS 505
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 506 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 545
>gi|334327058|ref|XP_001369893.2| PREDICTED: hypothetical protein LOC100015924 [Monodelphis
domestica]
Length = 332
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 12 NSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL 69
+ + +P Y Y I +RRRYK F + + EYQ LH + T ++F L+ L
Sbjct: 209 HPQAQLVPDYVLRYPAIYSEAERRRYKAVFQDQHAEYQELHQDVATARAKFQELETLL 266
>gi|84370242|ref|NP_001033691.1| MARVEL domain-containing protein 2 isoform 1 [Mus musculus]
gi|122064338|sp|Q3UZP0.1|MALD2_MOUSE RecName: Full=MARVEL domain-containing protein 2; AltName:
Full=Tricellulin
gi|74227508|dbj|BAE21816.1| unnamed protein product [Mus musculus]
gi|75268182|gb|ABA18656.1| tricellulin isoform a [Mus musculus]
gi|83758677|dbj|BAE54512.1| Tric [Mus musculus]
gi|110735074|gb|ABG89107.1| tricellulin isoform a [Mus musculus]
Length = 555
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 436 MPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL------------ 483
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+TV SR ++ R+E H++I
Sbjct: 484 --------------------------------DTVMSRLPH-HSENRQE------HERIS 504
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 505 -RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 544
>gi|332233762|ref|XP_003266074.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Nomascus
leucogenys]
Length = 559
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 495 PHHSESRQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|397470442|ref|XP_003806831.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Pan
paniscus]
Length = 559
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 495 PHHSESRQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|327269523|ref|XP_003219543.1| PREDICTED: protein dpy-19 homolog 4-like [Anolis carolinensis]
Length = 754
Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 34 RRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQ 68
++ YK DF+ Y EY+ LHA++E++ RF L Q
Sbjct: 3 QQSYKEDFNAEYDEYRTLHARMESITRRFMKLDAQ 37
>gi|148236933|ref|NP_001087667.1| occludin [Xenopus laevis]
gi|51704033|gb|AAH81061.1| MGC81923 protein [Xenopus laevis]
Length = 519
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 21 YEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL 69
++ +Y I EQR+ YK +F+ +EY++L A+++ V+ + L QL
Sbjct: 414 WDSEYPPIASDEQRQEYKQEFASDLQEYKLLQAELDEVSKSLSQLDRQL 462
>gi|296194407|ref|XP_002744994.1| PREDICTED: MARVEL domain-containing protein 2 [Callithrix jacchus]
Length = 556
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 437 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 491
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 492 PHHSESRQE----------------------------------------------HERIS 505
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 506 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 545
>gi|332233764|ref|XP_003266075.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Nomascus
leucogenys]
Length = 547
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 428 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 483 PHHSESRQE----------------------------------------------HERIS 496
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 497 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 536
>gi|297675406|ref|XP_002815671.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 559
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 495 PHHSESRQE----------------------------------------------HERIS 508
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 509 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 548
>gi|158259385|dbj|BAF85651.1| unnamed protein product [Homo sapiens]
Length = 558
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 439 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 493
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 494 PHHSESRQE----------------------------------------------HERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 508 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 547
>gi|347800726|ref|NP_001231663.1| MARVEL domain-containing protein 2 isoform 2 [Homo sapiens]
Length = 546
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 427 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 481
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 482 PHHSESRQE----------------------------------------------HERIS 495
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 496 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 535
>gi|289666784|ref|NP_001033692.2| MARVEL domain-containing protein 2 isoform 1 [Homo sapiens]
gi|317373387|sp|Q8N4S9.2|MALD2_HUMAN RecName: Full=MARVEL domain-containing protein 2; AltName:
Full=Tricellulin
Length = 558
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 439 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 493
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 494 PHHSESRQE----------------------------------------------HERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 508 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 547
>gi|397470444|ref|XP_003806832.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Pan
paniscus]
Length = 547
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 428 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 483 PHHSESRQE----------------------------------------------HERIS 496
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 497 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 536
>gi|297675404|ref|XP_002815670.1| PREDICTED: MARVEL domain-containing protein 2 isoform 1 [Pongo
abelii]
Length = 547
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 428 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 483 PHHSESRQE----------------------------------------------HERIS 496
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 497 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 536
>gi|395839212|ref|XP_003792491.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like [Otolemur garnettii]
Length = 523
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
Y TI+ E+ Y+ +F Y EYQ L+ K+ T++S L + ++ PGS
Sbjct: 415 YLTIISFEEHWNYEEEFRTEYNEYQDLYIKMPTLSSTLIKLDXKRKKLYPGS 466
>gi|297294466|ref|XP_002804448.1| PREDICTED: MARVEL domain-containing protein 2 [Macaca mulatta]
Length = 547
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 428 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 483 PHHSESRQE----------------------------------------------HERIS 496
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 497 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 536
>gi|21707225|gb|AAH33689.1| MARVEL domain containing 2 [Homo sapiens]
gi|83758679|dbj|BAE54513.1| TRIC [Homo sapiens]
gi|110735068|gb|ABG89104.1| tricellulin isoform a [Homo sapiens]
gi|119571662|gb|EAW51277.1| MARVEL domain containing 2, isoform CRA_a [Homo sapiens]
Length = 558
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 439 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 493
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 494 PHHSESRQE----------------------------------------------HERIS 507
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 508 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 547
>gi|410925306|ref|XP_003976122.1| PREDICTED: uncharacterized protein LOC101071307 [Takifugu rubripes]
Length = 1017
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 25 YTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
+ IVD E+R YK +F + ++EY+ L A+++ + A L ++ GS
Sbjct: 916 FPPIVDEEERLSYKREFDQDHQEYKSLQAELDNINQVLAELDREMSAHAEGS 967
>gi|110735070|gb|ABG89105.1| tricellulin isoform a1 [Homo sapiens]
Length = 546
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 427 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR-----L 481
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 482 PHHSESRQE----------------------------------------------HERIS 495
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 496 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 535
>gi|119913019|ref|XP_614589.3| PREDICTED: MARVEL domain-containing protein 2 [Bos taurus]
Length = 559
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPMIQTSDERERYKAVFQDQFAEYKELSAEVQAVLRKFDELDAMMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H+++ + R + + +L+++
Sbjct: 495 PHRSENQQEH--------------------------ERISRIHQELKKK----------- 517
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
K D F + + R +YL NKLSHIK+ + YD
Sbjct: 518 ----------KNDPTFLEKKERCDYLKNKLSHIKQKIQEYD 548
>gi|13097015|gb|AAH03296.1| Mrvldc2 protein, partial [Mus musculus]
Length = 436
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 317 MPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL------------ 364
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+TV SR ++ R+E H++I
Sbjct: 365 --------------------------------DTVMSRLPH-HSENRQE------HERIS 385
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 386 -RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 425
>gi|351712125|gb|EHB15044.1| MARVEL domain-containing protein 2 [Heterocephalus glaber]
Length = 554
Score = 38.5 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A++ Q LR+
Sbjct: 435 MPDYVAKYPMIQTDDERERYKAVFQDQFSEYKELSAEV----------QAVLRK------ 478
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+++ V SR ++ R+E H++I
Sbjct: 479 ----------------------------LDELDAVMSRLPH-HSENRQE------HERIS 503
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL +KLSHIK+ + YD
Sbjct: 504 -RIHEEFKKKKNDPSFLEKKERCDYLKSKLSHIKQQIQDYD 543
>gi|110735078|gb|ABG89109.1| tricellulin isoform c [Mus musculus]
Length = 326
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 207 MPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL------------ 254
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+TV SR ++ R+E H++I
Sbjct: 255 --------------------------------DTVMSRLPH-HSENRQE------HERIS 275
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 276 -RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 315
>gi|440911342|gb|ELR61024.1| MARVEL domain-containing protein 2 [Bos grunniens mutus]
Length = 559
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPMIQTSDERERYKAVFQDQFAEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H+++ + R + + +L+++
Sbjct: 495 PHRSENQQEH--------------------------ERISRIHQELKKK----------- 517
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
K D F + + R +YL NKLSHIK+ + YD
Sbjct: 518 ----------KNDPTFLEKKERCDYLKNKLSHIKQKIQEYD 548
>gi|110735076|gb|ABG89108.1| tricellulin isoform b [Mus musculus]
Length = 373
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 254 MPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL------------ 301
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+TV SR ++ R+E H++I
Sbjct: 302 --------------------------------DTVMSRLPH-HSENRQE------HERIS 322
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 323 -RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 362
>gi|47210862|emb|CAF92595.1| unnamed protein product [Tetraodon nigroviridis]
Length = 517
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQ--DTIVREYHENKTDRKFEDCRRRFEYLH 164
A+++ +A +F + + + S ++ + D I+ EY K+D + + R R EYL
Sbjct: 442 AEVQAMARKFQEMDGMMHNLSILSVLLQERERIDHILTEYQRKKSDPTYLEKRERCEYLK 501
Query: 165 NKLSHIKK 172
NKLSHIK+
Sbjct: 502 NKLSHIKQ 509
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 16 TFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL 69
+ Y Y +I E+R +Y+ F++ Y EY+ LHA+++ +A +F + +
Sbjct: 405 VVIADYVAKYPSIQSDEERDQYRAVFNDQYAEYRELHAEVQAMARKFQEMDGMM 458
>gi|297487580|ref|XP_002696327.1| PREDICTED: MARVEL domain-containing protein 2 [Bos taurus]
gi|296475873|tpg|DAA17988.1| TPA: MARVEL domain containing 2 [Bos taurus]
Length = 559
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPMIQTSDERERYKAVFQDQFAEYKELSAEVQAVLRKFDELDAVMSR-----L 494
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H+++ + R + + +L+++
Sbjct: 495 PHRSENQQEH--------------------------ERISRIHQELKKK----------- 517
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
K D F + + R +YL NKLSHIK+ + YD
Sbjct: 518 ----------KNDPTFLEKKERCDYLKNKLSHIKQKIQEYD 548
>gi|296233221|ref|XP_002761920.1| PREDICTED: occludin/ELL domain-containing protein 1 [Callithrix
jacchus]
Length = 265
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 102 LSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFE 161
+ A AK+ + +R +SL P S Q+ + RE+ + +TD F D + R
Sbjct: 184 VGCAQAKLRQLEARLSSL------PPPQSQKEAQVAVRVWREFEKKQTDPGFLDKQARCH 237
Query: 162 YLHNKLSHIKKLVFIYD 178
YL KL H+K + +D
Sbjct: 238 YLKGKLRHLKTQIQKFD 254
>gi|327263137|ref|XP_003216377.1| PREDICTED: MARVEL domain-containing protein 2-like [Anolis
carolinensis]
Length = 101
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR--E 72
+P Y Y I E+R RYK F++ + EY+ L A+++ V +F L +R+
Sbjct: 18 PIVMPDYLAKYPAIRTNEERDRYKAVFNDQFAEYKELSAEVQAVLKKFDELDGLMRKLPR 77
Query: 73 TPGS 76
PG+
Sbjct: 78 QPGN 81
>gi|29436410|gb|AAH49919.1| MARVEL (membrane-associating) domain containing 2 [Mus musculus]
gi|126522124|gb|AAI32357.1| Marveld2 protein [Mus musculus]
gi|126522462|gb|AAI32331.1| Marveld2 protein [Mus musculus]
Length = 140
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 63/164 (38%), Gaps = 52/164 (31%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETP 74
+P Y Y I + R RYK F + + EY+ L A+++ + +F L
Sbjct: 18 PIVMPDYVAKYPVIQTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDEL--------- 68
Query: 75 GSFAHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHK 134
+TV SR ++ R+E H+
Sbjct: 69 -----------------------------------DTVMSRLPH-HSENRQE------HE 86
Query: 135 QIQDTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
+I I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 87 RIS-RIHEEFRKKKNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 129
>gi|334325125|ref|XP_001380619.2| PREDICTED: hypothetical protein LOC100031321 [Monodelphis domestica]
Length = 1087
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASL 65
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L
Sbjct: 968 MPDYVAKYPAIQSDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDEL 1015
>gi|432884588|ref|XP_004074505.1| PREDICTED: occludin-like [Oryzias latipes]
Length = 493
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 107 AKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDC---RRRFEYL 163
A ++ V R + L +L + GS Q D + EY+ K+ +K D +RR +YL
Sbjct: 420 ADLDKVNRRLSELDEELDQLEEGS---PQFLDAM-DEYNAVKSSKKTPDYLVKKRRCKYL 475
Query: 164 HNKLSHIKKLVFIYD 178
KLSHIKK+V YD
Sbjct: 476 KAKLSHIKKMVSDYD 490
>gi|348543189|ref|XP_003459066.1| PREDICTED: occludin-like [Oreochromis niloticus]
Length = 460
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 22 EKDYTT----IVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGS 76
E+D++ I+D ++R YK +F ++EY+ L A+++++ A L +L R + GS
Sbjct: 352 EEDFSVLLPPILDEQERLAYKQEFDRDHQEYKSLQAELDSINQDLADLDQELDRHSDGS 410
>gi|402871762|ref|XP_003899820.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Papio
anubis]
Length = 547
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 59/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V + L + R
Sbjct: 428 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKLDELDAVMSR-----L 482
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
H ++ R H++I
Sbjct: 483 PHHSESRQE----------------------------------------------HERIS 496
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 497 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 536
>gi|339234541|ref|XP_003378825.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
gi|316978578|gb|EFV61552.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
Length = 1326
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 11 SNSTSTFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLR 70
SN + + KD+ +I EQRRRYK F Y EY + ++ A + NQL+
Sbjct: 436 SNGSPPSNCSFWKDFPSIDSDEQRRRYKQAFDNDYPEYISCYEQLNQFYEEIAIMVNQLK 495
Query: 71 R 71
+
Sbjct: 496 Q 496
>gi|291395480|ref|XP_002714121.1| PREDICTED: MARVEL domain containing 2 [Oryctolagus cuniculus]
Length = 558
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 106 AAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVR---EYHENKTDRKFEDCRRRFEY 162
+A+++ V +F L L R P ++Q + I R E+ + K D F + + R +Y
Sbjct: 473 SAEVQAVLRKFEELDAVLSR-LPQRSDNRQEHERISRIHEEFMKKKNDPSFLEKKERCDY 531
Query: 163 LHNKLSHIKKLVFIYD 178
L NKLSHIK+ + YD
Sbjct: 532 LKNKLSHIKQRIQEYD 547
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L L R
Sbjct: 439 MPDYVAKYPAIQTEDERERYKAVFQDQFSEYKELSAEVQAVLRKFEELDAVLSR 492
>gi|432095517|gb|ELK26669.1| Occludin/ELL domain-containing protein 1 [Myotis davidii]
Length = 188
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 102 LSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRFE 161
L A AK++ + + SL P S Q+ + RE+ + +TD F D + R
Sbjct: 107 LRSAQAKLQQLEALLTSL------PPPQSQKEAQVAARVWREFEKKRTDPGFLDKQARCR 160
Query: 162 YLHNKLSHIKKLVFIYDSNN 181
YL KL H+K + +DS
Sbjct: 161 YLKGKLRHLKAQIQKFDSRG 180
>gi|47202217|emb|CAF89163.1| unnamed protein product [Tetraodon nigroviridis]
Length = 27
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 157 RRRFEYLHNKLSHIKKLVFIYDSNNL 182
+ R EYLHNKL+HIKKL+ YD L
Sbjct: 2 KLRCEYLHNKLAHIKKLISAYDQQQL 27
>gi|432104568|gb|ELK31180.1| MARVEL domain-containing protein 2 [Myotis davidii]
Length = 513
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 15 STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
LP Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 391 PIMLPDYVAKYPVIRTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR 447
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 106 AAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVR---EYHENKTDRKFEDCRRRFEY 162
+A+++ V +F L + R P ++Q + I R E+ + K D F + + R +Y
Sbjct: 428 SAEVQAVLRKFDELDAVMSR-LPHHSGNQQEHERISRIHEEFKKKKKDPTFLEKKERCDY 486
Query: 163 LHNKLSHIKKLVFIYD 178
L NKLSHIK+ + YD
Sbjct: 487 LKNKLSHIKQRIQEYD 502
>gi|395825432|ref|XP_003785937.1| PREDICTED: MARVEL domain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 546
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 60/161 (37%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I ++R RYK F + + EY+ L A+++ V + L
Sbjct: 427 MPDYVAKYPVIQTNDERERYKAVFQDQFAEYKELSAEVQAVLRKLDEL------------ 474
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
+ V SR L R + H++I
Sbjct: 475 --------------------------------DAVMSR-------LPRHSENRQEHERIS 495
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
I E+ + K D F + + R +YL NKLSHIK+ + YD
Sbjct: 496 -RIHEEFKKKKNDPTFLEKKERCDYLKNKLSHIKQRIQEYD 535
>gi|395511890|ref|XP_003760184.1| PREDICTED: uncharacterized protein LOC100932325 [Sarcophilus
harrisii]
Length = 228
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 16 TFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQL 69
FLP ++Y I +QR+ YK +F +EY+ L A+I+ + + L +L
Sbjct: 117 NFLPLILREYPPITSDQQRQLYKKNFDTGLQEYKSLQAEIDEINKDLSRLDKEL 170
>gi|335307078|ref|XP_003360697.1| PREDICTED: MARVEL domain-containing protein 2-like [Sus scrofa]
Length = 541
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 106 AAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVR---EYHENKTDRKFEDCRRRFEY 162
+A+++ V +F L + R P ++Q + I R E+ + K D F + + R +Y
Sbjct: 456 SAEVQAVLKKFDELDAMMSR-LPHRSENQQEHERISRIHEEFKKKKNDPTFLEKKERCDY 514
Query: 163 LHNKLSHIKKLVFIYD 178
L NKLSHIK+ + YD
Sbjct: 515 LKNKLSHIKQRIQEYD 530
>gi|354488330|ref|XP_003506323.1| PREDICTED: MARVEL domain-containing protein 2 [Cricetulus griseus]
Length = 557
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 52/161 (32%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRRETPGSF 77
+P Y Y I + R RYK F + + EY+ L A+++ + +F L + R
Sbjct: 438 MPDYVAKYPVIRTDDDRERYKAVFQDQFSEYKELSAEVQAILRKFDELDAVMSRLP---- 493
Query: 78 AHKAQGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQ 137
R SE F R + + + R++
Sbjct: 494 ------RHSENFQEH---------------------ERISRIHEEFRKK----------- 515
Query: 138 DTIVREYHENKTDRKFEDCRRRFEYLHNKLSHIKKLVFIYD 178
K D F + + R +YL NKLSHIK+ + YD
Sbjct: 516 ----------KNDPSFLEKKERCDYLKNKLSHIKQRIQEYD 546
>gi|413956785|gb|AFW89434.1| hypothetical protein ZEAMMB73_684582 [Zea mays]
Length = 1194
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 9 STSNSTSTFLPKYEKDYT----TIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
S+S+ + F KY+KD I D Q + Y +++E Y Y L+++I+ S F
Sbjct: 1070 SSSDDDNLFFSKYDKDAPELKDPIKDFSQYKDYVQEYNEKYGVYSYLNSQIDKTMSEFLK 1129
Query: 65 LQNQL 69
+Q+ L
Sbjct: 1130 IQDDL 1134
>gi|55730620|emb|CAH92031.1| hypothetical protein [Pongo abelii]
Length = 518
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR 493
>gi|157132904|ref|XP_001662695.1| Ofd1 protein, putative [Aedes aegypti]
gi|108871041|gb|EAT35266.1| AAEL012556-PA [Aedes aegypti]
Length = 1159
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 8 TSTSNST---STFLPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFAS 64
T SNS+ ST P + D R K D +ES + Q +++I ++ S
Sbjct: 174 TEQSNSSPNCSTTTPPAQDDL--------RLGLKCDLAESQLQLQEANSQILSLQSVIDQ 225
Query: 65 LQNQLRR-ETPGSFAHKAQ-GRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQ 122
L+ Q++ +TP A+ R E H + E +F+L IA A++ ++ + L+NQ
Sbjct: 226 LRTQIQTLQTPSEEEEAARTARNKEFRHLQAELADSQFQLQIANAEVLSLQTDITQLKNQ 285
Query: 123 LR 124
++
Sbjct: 286 IK 287
>gi|154757574|gb|AAI51770.1| MARVELD2 protein [Bos taurus]
Length = 530
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPMIQTSDERERYKAVFQDQFAEYKELSAEVQAVLRKFDELDAVMSR 493
>gi|426384497|ref|XP_004058800.1| PREDICTED: MARVEL domain-containing protein 2 [Gorilla gorilla
gorilla]
Length = 559
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 18 LPKYEKDYTTIVDLEQRRRYKNDFSESYKEYQMLHAKIETVASRFASLQNQLRR 71
+P Y Y I ++R RYK F + + EY+ L A+++ V +F L + R
Sbjct: 440 MPDYVAKYPVIQTDDERERYKAVFQDQFSEYKELSAEVQAVLRKFDELDAVMSR 493
>gi|300727557|ref|ZP_07060948.1| putative lipoprotein [Prevotella bryantii B14]
gi|299775260|gb|EFI71861.1| putative lipoprotein [Prevotella bryantii B14]
Length = 643
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 10/117 (8%)
Query: 69 LRRETPGSFAHKA--QGRGSELFHAKMEPCCFRFRLSIAAAKIETVASRFASLQNQLRRE 126
++ TPG + A G+ +F+ K E F + + + K +T +
Sbjct: 188 IKGVTPGKYRIYALQDVDGNFVFNQKSEKIAFSHDIIVPSCKPDTRQDTLWKDSLHINTI 247
Query: 127 TPGSFAHKQIQDTIVREYHENKTDRKFEDCRRR--------FEYLHNKLSHIKKLVF 175
TP + H D ++R + E TDR F R+ F Y + L IK L F
Sbjct: 248 TPIRYTHYYPDDIVLRAFTEQMTDRYFIKSERKDANHFTLFFSYGDDNLPQIKGLNF 304
>gi|417408955|gb|JAA51005.1| Putative rna polymerase ii elongation factor, partial [Desmodus
rotundus]
Length = 241
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 101 RLSIAAAKIETVASRFASLQNQLRRETPGSFAHKQIQDTIVREYHENKTDRKFEDCRRRF 160
+L A K++ + + SL P S Q+ + RE+ + +TD F D + R+
Sbjct: 159 QLDSAQKKLQQLKALLTSL------PPPRSQKEAQVATRVWREFEKKRTDPIFLDKQARY 212
Query: 161 EYLHNKLSHIKKLVFIYDSNN 181
YL +KL H+K + +D+
Sbjct: 213 RYLKSKLRHLKAQIQKFDNRG 233
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,515,428,539
Number of Sequences: 23463169
Number of extensions: 86768400
Number of successful extensions: 272226
Number of sequences better than 100.0: 382
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 271355
Number of HSP's gapped (non-prelim): 730
length of query: 183
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 50
effective length of database: 9,238,593,890
effective search space: 461929694500
effective search space used: 461929694500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 72 (32.3 bits)