BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10139
(106 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|383855598|ref|XP_003703297.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Megachile
rotundata]
Length = 754
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 68/80 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RPYKKPELY + R+GI+DR+RN M IL +AF RDNTYHL R+VWND
Sbjct: 218 LKERLIHLLALRPYKKPELYDRINREGIKDRERNVMTTILKQVAFMRDNTYHLHRYVWND 277
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWP+Y++Q+K MLK R+
Sbjct: 278 VQEDWPYYTEQEKAMLKRRK 297
>gi|328784149|ref|XP_393419.3| PREDICTED: RNA polymerase II elongation factor ELL-like [Apis
mellifera]
Length = 752
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 68/80 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RPYKKPELY + R+G+++R+RN M IL +AF RDNTYHL R+VWND
Sbjct: 217 LKERLIHLLALRPYKKPELYDRINREGLKERERNIMTTILKQVAFMRDNTYHLHRYVWND 276
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWP+Y++Q+K MLK R+
Sbjct: 277 VQEDWPYYTEQEKAMLKRRK 296
>gi|307191477|gb|EFN75009.1| RNA polymerase II elongation factor ELL [Camponotus floridanus]
Length = 541
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 70/80 (87%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IH+LA+RPYKKPELY + ++G+R+++++ MM IL +A+ RDNTYHLQRH+WND
Sbjct: 5 LKERLIHVLALRPYKKPELYDRINKEGLREKEKSIMMTILKQVAYMRDNTYHLQRHIWND 64
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY++Q+K ML+ R+
Sbjct: 65 VQEDWPFYTEQEKTMLRRRK 84
>gi|345482824|ref|XP_003424673.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Nasonia
vitripennis]
Length = 620
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 67/80 (83%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RP+K+PELY +TR+GIR++++N + +L IAF RDNTYHL R VWND
Sbjct: 128 LKERLIHLLALRPFKRPELYDRITREGIREKEKNVIATVLKQIAFMRDNTYHLHRCVWND 187
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY+ Q+K MLK R+
Sbjct: 188 VQEDWPFYTDQEKAMLKRRK 207
>gi|193648109|ref|XP_001947940.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Acyrthosiphon pisum]
Length = 517
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 68/80 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L+DRIIHLLA+RPYKKPEL + L RDG++D+DR Q+M++L+ +A A+DN Y+L RH+WN+
Sbjct: 220 LRDRIIHLLALRPYKKPELISILNRDGLKDKDRTQIMSVLSHVAQAKDNAYYLLRHIWNE 279
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFYS QD +LK R+
Sbjct: 280 VQEDWPFYSSQDHIVLKRRK 299
>gi|380020092|ref|XP_003693930.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like [Apis florea]
Length = 751
Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 68/80 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RPYKKPELY + R+G+++R+RN M IL +AF RDNTYHL R+VWND
Sbjct: 218 LKERLIHLLALRPYKKPELYDRINREGLKERERNIMTTILKQVAFMRDNTYHLHRYVWND 277
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWP+Y++Q+K MLK R+
Sbjct: 278 VQEDWPYYTEQEKAMLKRRK 297
>gi|350402001|ref|XP_003486332.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Bombus
impatiens]
Length = 747
Score = 117 bits (294), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 66/80 (82%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RPYKKPELY + R+GI+DR+R M IL +AF RDNTYHL R+VWND
Sbjct: 220 LKERLIHLLALRPYKKPELYDRINREGIKDRERTAMPMILKQVAFMRDNTYHLHRYVWND 279
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V +DWP+Y++Q+K MLK R+
Sbjct: 280 VLEDWPYYTEQEKTMLKRRK 299
>gi|340714745|ref|XP_003395885.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bombus
terrestris]
Length = 746
Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 67/80 (83%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RPYKKPELY + R+GI+DR+R+ M IL +AF RDNTYHL R+VWND
Sbjct: 220 LRERLIHLLALRPYKKPELYDRINREGIKDRERSAMPMILKQVAFMRDNTYHLHRYVWND 279
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V +DWP+Y++Q+K MLK R+
Sbjct: 280 VLEDWPYYTEQEKAMLKRRK 299
>gi|322797009|gb|EFZ19323.1| hypothetical protein SINV_03092 [Solenopsis invicta]
Length = 657
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/80 (58%), Positives = 67/80 (83%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IH+LA+RPYKKPELY + ++G+RDR+R M IL +A+ RDNTYHL RH+WND
Sbjct: 133 LKERLIHVLALRPYKKPELYDRINKEGLRDRERPVMTTILKQVAYMRDNTYHLNRHIWND 192
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY++Q++ ML+ R+
Sbjct: 193 VQEDWPFYTEQERTMLRRRK 212
>gi|332022815|gb|EGI63088.1| RNA polymerase II elongation factor ELL [Acromyrmex echinatior]
Length = 528
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 67/80 (83%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IH+LA+RPYKKPELY + ++G+R+R+R M +L +A+ RDNTYHL RH+WND
Sbjct: 114 LKERLIHVLALRPYKKPELYERIKKEGLRERERPVMQTLLKQVAYMRDNTYHLYRHIWND 173
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY++Q++ ML+ R+
Sbjct: 174 VQEDWPFYTEQERTMLRRRK 193
>gi|357618195|gb|EHJ71272.1| hypothetical protein KGM_11843 [Danaus plexippus]
Length = 681
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 72/103 (69%), Gaps = 7/103 (6%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+I LLA++P+KKPELYA L +GI++++R+ + IL I +DN YHL+RH+WND
Sbjct: 297 LKERLIQLLALKPFKKPELYARLISEGIKEKERSMVNKILPEIGTLKDNCYHLRRHIWND 356
Query: 62 VQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDKNML 104
V +DWPFY++++K+MLK R+ ++TP S N L
Sbjct: 357 VNEDWPFYTEEEKHMLKRRKP-------QNLTPPLSSDSANSL 392
>gi|307214939|gb|EFN89784.1| RNA polymerase II elongation factor ELL2 [Harpegnathos saltator]
Length = 685
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/80 (53%), Positives = 66/80 (82%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IHLLA+RP K+PE+Y + ++GIR+R++ +M +L +A RDN+YHL RHVWND
Sbjct: 96 LKERLIHLLALRPLKRPEIYDRINKEGIREREKPIVMTLLRQVANMRDNSYHLLRHVWND 155
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY++Q++ ML+ R+
Sbjct: 156 VQEDWPFYTEQERAMLRRRK 175
>gi|443692223|gb|ELT93871.1| hypothetical protein CAPTEDRAFT_226667 [Capitella teleta]
Length = 606
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
L++R++HLLA+RP+KKPEL A L +DGIRDRDRN + IL +A RDN+Y L RH+
Sbjct: 274 LKERVVHLLAIRPFKKPELIARLQKDGIRDRDRNSLFPILKTVALFNPRDNSYSLLRHLL 333
Query: 60 NDVQDDWPFYSQQDKNMLKSRE 81
++V++DWPFY++ D+ +LK R+
Sbjct: 334 SEVKEDWPFYTETDRQLLKRRK 355
>gi|321470781|gb|EFX81756.1| hypothetical protein DAPPUDRAFT_317378 [Daphnia pulex]
Length = 244
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 59/77 (76%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R+IH+LA+R YKKPEL L ++G++++D+ +M +L+ I +D YHL RH+WND
Sbjct: 167 LRERLIHMLAIRSYKKPELVTRLHKEGLKEKDKKLIMNVLSAIGLMKDQAYHLARHIWND 226
Query: 62 VQDDWPFYSQQDKNMLK 78
V DDWPFY+ Q+K +LK
Sbjct: 227 VHDDWPFYTDQEKQILK 243
>gi|157112024|ref|XP_001657379.1| hypothetical protein AaeL_AAEL006021 [Aedes aegypti]
gi|108878210|gb|EAT42435.1| AAEL006021-PA [Aedes aegypti]
Length = 661
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 61/80 (76%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IH+LA+RPYK+PE+ L +DG+R +R + IL I+ RDN Y L RHVWND
Sbjct: 310 IRERLIHMLALRPYKRPEIILKLQQDGVRKEERKCISQILTNISSMRDNVYSLHRHVWND 369
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
VQ+DWPFY++Q++ +LK R+
Sbjct: 370 VQEDWPFYTEQERQILKRRK 389
>gi|170036275|ref|XP_001845990.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878867|gb|EDS42250.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 625
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 12 VRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWNDVQDDWPFYSQ 71
+RPYKKPELYA L +DGIR +++N + L IA RDN Y+L RH+WNDVQ+DWPFYS+
Sbjct: 301 IRPYKKPELYAKLAQDGIRGQEKNCIAQALKAIASMRDNVYYLHRHMWNDVQEDWPFYSE 360
Query: 72 QDKNMLKSRE 81
QD+ LK R+
Sbjct: 361 QDRQTLKRRK 370
>gi|195020238|ref|XP_001985153.1| GH16905 [Drosophila grimshawi]
gi|193898635|gb|EDV97501.1| GH16905 [Drosophila grimshawi]
Length = 1137
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 60/80 (75%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R++HLLA++P+KKPELY+ L +GIRDRDRN M L I+ NTY+L+ +WND
Sbjct: 379 LRERLVHLLALKPFKKPELYSRLKNEGIRDRDRNLMSKTLTEISTMSHNTYNLRHQMWND 438
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 439 VDENWPFFSEQELQQLKRRK 458
>gi|242003767|ref|XP_002422854.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212505724|gb|EEB10116.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 441
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++R+IHLLA+RPYKKPEL ++RDG+ ++DR + +L+ +A DN +H R +WN
Sbjct: 126 LRERVIHLLALRPYKKPELCDRMSRDGLSEKDRKLLPQVLSQVAKLGTDNAFHPIRGIWN 185
Query: 61 DVQDDWPFYSQQDKNMLKSRE 81
DVQ+DWPFY+ QD+ +L+ R+
Sbjct: 186 DVQEDWPFYTDQDRQILRRRK 206
>gi|195379438|ref|XP_002048486.1| GJ13997 [Drosophila virilis]
gi|194155644|gb|EDW70828.1| GJ13997 [Drosophila virilis]
Length = 835
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++P+KKPELYA L +GI+DR+RN + IL I+ NT++L+R +WND
Sbjct: 124 IRERLIHLLALKPFKKPELYARLKNEGIKDRERNLIGNILTDISTMSHNTFNLRRQIWND 183
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 184 VDENWPFFSEQELQQLKRRK 203
>gi|77455296|gb|ABA86457.1| CG32217 [Drosophila yakuba]
Length = 1043
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 374 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 433
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 434 VDENWPFFSEQEVQQLKRRK 453
>gi|77455298|gb|ABA86458.1| CG32217 [Drosophila yakuba]
Length = 1041
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 372 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 431
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 432 VDENWPFFSEQEVQQLKRRK 451
>gi|45550656|ref|NP_649155.3| Su(Tpl), isoform A [Drosophila melanogaster]
gi|281366481|ref|NP_001163477.1| Su(Tpl), isoform B [Drosophila melanogaster]
gi|45445818|gb|AAF49098.3| Su(Tpl), isoform A [Drosophila melanogaster]
gi|209863150|gb|ACI88733.1| LD19974p [Drosophila melanogaster]
gi|221307744|gb|ACM16731.1| LD12841p [Drosophila melanogaster]
gi|272455250|gb|ACZ94748.1| Su(Tpl), isoform B [Drosophila melanogaster]
Length = 1059
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 379 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 438
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 439 VDENWPFFSEQEVQQLKRRK 458
>gi|15991717|gb|AAL13036.1| ELL [Drosophila melanogaster]
Length = 1060
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 379 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 438
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 439 VDENWPFFSEQEVQQLKRRK 458
>gi|77455290|gb|ABA86454.1| CG32217 [Drosophila melanogaster]
Length = 1047
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 372 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 431
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 432 VDENWPFFSEQEVQQLKRRK 451
>gi|77455300|gb|ABA86459.1| CG32217 [Drosophila erecta]
Length = 1050
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 373 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 432
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 433 VDENWPFFSEQEVQQLKRRK 452
>gi|78214289|gb|ABB36459.1| AT31092p [Drosophila melanogaster]
Length = 808
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 134 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 193
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 194 VDENWPFFSEQEVQQLKRRK 213
>gi|77455292|gb|ABA86455.1| CG32217 [Drosophila simulans]
Length = 1045
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 372 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 431
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 432 VDENWPFFSEQEVQQLKRRK 451
>gi|195591655|ref|XP_002085554.1| GD12242 [Drosophila simulans]
gi|194197563|gb|EDX11139.1| GD12242 [Drosophila simulans]
Length = 1056
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 379 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 438
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 439 VDENWPFFSEQEVQQLKRRK 458
>gi|195128579|ref|XP_002008740.1| GI13662 [Drosophila mojavensis]
gi|193920349|gb|EDW19216.1| GI13662 [Drosophila mojavensis]
Length = 1071
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++P+KKPELYA L +GI+DR+RN + IL I+ NT++L+R +WND
Sbjct: 347 IRERLIHLLALKPFKKPELYARLKNEGIKDRERNLIGNILTDISTMSHNTFNLRRQMWND 406
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 407 VDENWPFFSEQELQQLKRRK 426
>gi|77455294|gb|ABA86456.1| CG32217 [Drosophila simulans]
Length = 1048
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 373 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 432
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 433 VDENWPFFSEQEVQQLKRRK 452
>gi|195354290|ref|XP_002043631.1| GM15678 [Drosophila sechellia]
gi|194127799|gb|EDW49842.1| GM15678 [Drosophila sechellia]
Length = 1057
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 379 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 438
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 439 VDENWPFFSEQEVQQLKRRK 458
>gi|427784071|gb|JAA57487.1| Putative rna polymerase ii elongation factor ell [Rhipicephalus
pulchellus]
Length = 525
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 60/76 (78%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWNDV 62
++R+IHLLA+RPYKKPEL A L ++GI+++DR + A+L+ +A +DN+Y L RH WN V
Sbjct: 204 RERVIHLLALRPYKKPELLARLMKEGIKEQDRKGLSAVLSQVAVLKDNSYCLARHAWNQV 263
Query: 63 QDDWPFYSQQDKNMLK 78
DDWP+Y+ +++ ++K
Sbjct: 264 CDDWPYYTPEEQELVK 279
>gi|194751937|ref|XP_001958280.1| GF10841 [Drosophila ananassae]
gi|190625562|gb|EDV41086.1| GF10841 [Drosophila ananassae]
Length = 1110
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 62/80 (77%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R++HLLA++ +KKPEL+A L +GIRDR+RNQ+ IL I+ NTY+L+R +WND
Sbjct: 415 IRERLVHLLALKAFKKPELFARLKNEGIRDRERNQITNILMDISTMSHNTYNLRRQMWND 474
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WPF+S+Q+ LK R+
Sbjct: 475 VDENWPFFSEQELQQLKRRK 494
>gi|189242036|ref|XP_967115.2| PREDICTED: similar to AGAP004795-PA [Tribolium castaneum]
Length = 597
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA+RP+KK EL+ +T++G+R++ N + +IL I+F +DN YHL R +WN+
Sbjct: 187 IKERLIHLLALRPFKKVELHDRITKEGVREK--NGITSILKQISFMKDNCYHLNRAMWNE 244
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V +DWPFY++ ++ MLK R+
Sbjct: 245 VNEDWPFYTESERQMLKRRK 264
>gi|270015918|gb|EFA12366.1| hypothetical protein TcasGA2_TC002072 [Tribolium castaneum]
Length = 632
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA+RP+KK EL+ +T++G+R++ N + +IL I+F +DN YHL R +WN+
Sbjct: 222 IKERLIHLLALRPFKKVELHDRITKEGVREK--NGITSILKQISFMKDNCYHLNRAMWNE 279
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V +DWPFY++ ++ MLK R+
Sbjct: 280 VNEDWPFYTESERQMLKRRK 299
>gi|195428617|ref|XP_002062368.1| GK17503 [Drosophila willistoni]
gi|194158453|gb|EDW73354.1| GK17503 [Drosophila willistoni]
Length = 1144
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 61/80 (76%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IHLLA++ +KKPEL+A L +GIRDR+RN + IL I+ NTY+L+R +WND
Sbjct: 385 IRERLIHLLALKTFKKPELFARLKNEGIRDRERNLITGILTDISTMSHNTYNLRRQMWND 444
Query: 62 VQDDWPFYSQQDKNMLKSRE 81
V ++WP++S+Q+ LK R+
Sbjct: 445 VDENWPYFSEQELQQLKRRK 464
>gi|198466495|ref|XP_002135203.1| GA23928 [Drosophila pseudoobscura pseudoobscura]
gi|198150626|gb|EDY73830.1| GA23928 [Drosophila pseudoobscura pseudoobscura]
Length = 1115
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 62/81 (76%)
Query: 1 MLQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWN 60
+++R+IHLLA++ +KKPEL+A L +GIR+R+RN + +IL I+ NTY+L+R +WN
Sbjct: 419 TIRERLIHLLALKAFKKPELFARLNNEGIRERERNLITSILKDISTMAQNTYNLRRQMWN 478
Query: 61 DVQDDWPFYSQQDKNMLKSRE 81
DV ++WP++S+Q+ LK R+
Sbjct: 479 DVDENWPYFSEQEVQQLKRRK 499
>gi|158297841|ref|XP_318017.4| AGAP004795-PA [Anopheles gambiae str. PEST]
gi|157014520|gb|EAA13291.5| AGAP004795-PA [Anopheles gambiae str. PEST]
Length = 639
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 55/79 (69%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+++R+IH+LA++PYK+PEL L +DG+R + IL I+ RD L R++WN+
Sbjct: 312 IKERLIHMLALKPYKRPELVVKLQQDGVRKEEMKCTQQILKTISSTRDGVLILHRNIWNE 371
Query: 62 VQDDWPFYSQQDKNMLKSR 80
VQDDWPFYS+QD+ +K R
Sbjct: 372 VQDDWPFYSEQDRQAVKRR 390
>gi|449282906|gb|EMC89641.1| RNA polymerase II elongation factor ELL2, partial [Columba livia]
Length = 539
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%), Gaps = 8/105 (7%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L RDG+ +D+N + IL +A +DN+Y L+ +++ D
Sbjct: 143 DRVIHLLALKNYKKPELLARLQRDGVNQKDKNSLGIILQQVANLNPKDNSYTLKDYLFKD 202
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQN-FSENHSITPFYSQQD 100
+Q DWP YS+ DK L+ SR+L QN S +HS +P S +D
Sbjct: 203 IQKDWPGYSEIDKQSLELILSRKLNSSQNATSTSHSGSPVNSNKD 247
>gi|74183899|dbj|BAE24514.1| unnamed protein product [Mus musculus]
Length = 606
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYSETDRQTLDLVLSRKLNPSQNASTSRSESPLCSSKD 311
>gi|327263225|ref|XP_003216421.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Anolis
carolinensis]
Length = 639
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 7/96 (7%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA++ YKKPEL A L +DG+ +DRN + AIL +A +DN+Y L+ HV+
Sbjct: 202 RDRVIHLLALKTYKKPELLARLLKDGVSQKDRNSLAAILQQVANLNPKDNSYTLKEHVYK 261
Query: 61 DVQDDWPFYSQQDKNMLK---SRELLQNFSENHSIT 93
+VQ DWP Y++ D+ L+ SR+L N S+N + T
Sbjct: 262 EVQKDWPGYNEIDRQSLELILSRKL--NSSQNATST 295
>gi|74181941|dbj|BAE32669.1| unnamed protein product [Mus musculus]
Length = 626
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYSETDRQTLDLVLSRKLNPSQNASTSRSESPLCSSKD 311
>gi|148705160|gb|EDL37107.1| mCG5549 [Mus musculus]
Length = 623
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 192 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 251
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 252 LQRDWPGYSETDRQTLDLVLSRKLNPSQNASTSRSESPLCSSKD 295
>gi|116256447|ref|NP_620403.2| RNA polymerase II elongation factor ELL2 [Mus musculus]
gi|341940492|sp|Q3UKU1.2|ELL2_MOUSE RecName: Full=RNA polymerase II elongation factor ELL2
Length = 639
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYSETDRQTLDLVLSRKLNPSQNASTSRSESPLCSSKD 311
>gi|74219142|dbj|BAE26710.1| unnamed protein product [Mus musculus]
Length = 639
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYSETDRQTLDLELSRKLNPSQNASTSRSESPLCSSKD 311
>gi|223462695|gb|AAI51189.1| Ell2 protein [Mus musculus]
Length = 639
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYSETDRQTLDLVLSRKLNPSQNASTSRSESPLCSSKD 311
>gi|118104340|ref|XP_424711.2| PREDICTED: RNA polymerase II elongation factor ELL2 [Gallus gallus]
Length = 636
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L RDG+ +DRN + A+L +A +DN+Y L+ +++ D
Sbjct: 202 DRVIHLLALKTYKKPELLARLQRDGVNLKDRNSLTAVLQQVANLNPKDNSYTLKDYLYKD 261
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP Y++ DK L+
Sbjct: 262 IQKDWPGYNEVDKQTLE 278
>gi|354475689|ref|XP_003500060.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Cricetulus griseus]
Length = 700
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 269 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 328
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L+ SR+L QN + S +P S +D
Sbjct: 329 LQRDWPGYSETDRRSLESVLSRKLNPSQNAGTSRSESPMCSSKD 372
>gi|344242293|gb|EGV98396.1| RNA polymerase II elongation factor ELL2 [Cricetulus griseus]
Length = 507
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 76 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 135
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ D+ L+ SR+L QN + S +P S +D
Sbjct: 136 LQRDWPGYSETDRRSLESVLSRKLNPSQNAGTSRSESPMCSSKD 179
>gi|326935287|ref|XP_003213706.1| PREDICTED: RNA polymerase II elongation factor ELL2-like, partial
[Meleagris gallopavo]
Length = 127
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA++ YKKPEL A L RDG+ +DRN + AIL +A +DN+Y L+ +++
Sbjct: 46 RDRVIHLLALKTYKKPELLARLQRDGVNLKDRNSLTAILQQVANLNPKDNSYTLKDYLFK 105
Query: 61 DVQDDWPFYSQQDKNMLK 78
D+Q DWP Y++ DK L+
Sbjct: 106 DIQKDWPGYNEVDKQTLE 123
>gi|149058900|gb|EDM09907.1| elongation factor RNA polymerase II 2, isoform CRA_b [Rattus
norvegicus]
Length = 624
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 192 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 251
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ DK L SR+L QN + +P S +D
Sbjct: 252 LQRDWPGYSETDKQTLDLVLSRKLNPSQNAGTSRPESPMCSSKD 295
>gi|301607791|ref|XP_002933477.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Xenopus
(Silurana) tropicalis]
Length = 630
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
+R+IHLLA++PYKKPE+ A L +DG+ +D+N + IL +A +DN+Y L+ V+ +
Sbjct: 204 ERVIHLLALKPYKKPEILARLHKDGVNQKDKNSLGVILQQVANLNPKDNSYTLKDFVYKE 263
Query: 62 VQDDWPFYSQQDKNMLK---SRELLQNFSENHSIT 93
+Q DWP Y + DK++L SR+L Q+ S S +
Sbjct: 264 IQRDWPGYLEGDKHLLDQVLSRKLNQSQSNTTSTS 298
>gi|293345072|ref|XP_001054852.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1
[Rattus norvegicus]
gi|293356940|ref|XP_226624.5| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 2
[Rattus norvegicus]
Length = 640
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNFSENHSITPFYSQQD 100
+Q DWP YS+ DK L SR+L QN + +P S +D
Sbjct: 268 LQRDWPGYSETDKQTLDLVLSRKLNPSQNAGTSRPESPMCSSKD 311
>gi|114599074|ref|XP_517646.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 4 [Pan
troglodytes]
gi|410226096|gb|JAA10267.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410267212|gb|JAA21572.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410301310|gb|JAA29255.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
gi|410352529|gb|JAA42868.1| elongation factor, RNA polymerase II, 2 [Pan troglodytes]
Length = 640
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 70/107 (65%), Gaps = 12/107 (11%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SRELLQNFSEN-----HSITPFYSQQD 100
+Q DWP YS+ D+ L+ SR+L N S+N HS +P S +D
Sbjct: 268 LQRDWPGYSEIDRRSLESVLSRKL--NPSQNAAGTSHSESPVCSSRD 312
>gi|391348457|ref|XP_003748464.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Metaseiulus occidentalis]
Length = 563
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWNDV 62
+DR+IH+LA+RP+KKPE+ A + ++G++D ++ A+L+ +DNTYHL R W DV
Sbjct: 231 RDRLIHMLAIRPHKKPEILARMNKEGVKDSEKKGTSALLSHNTTLKDNTYHLNRSGWQDV 290
Query: 63 -QDDWPFYSQQDKNMLK 78
+D+WPFY+ ++ ++K
Sbjct: 291 HEDEWPFYTTDERYLVK 307
>gi|403256218|ref|XP_003920787.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Saimiri
boliviensis boliviensis]
Length = 640
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 69/107 (64%), Gaps = 12/107 (11%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SRELLQNFSEN-----HSITPFYSQQD 100
+Q DWP YS+ D+ L+ SR+L N S+N HS +P S +D
Sbjct: 268 LQRDWPGYSEIDRRSLESVLSRKL--NPSQNAAGTSHSESPVCSSRD 312
>gi|426349511|ref|XP_004042342.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Gorilla
gorilla gorilla]
Length = 807
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 71/108 (65%), Gaps = 12/108 (11%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+
Sbjct: 387 RDRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFK 446
Query: 61 DVQDDWPFYSQQDKNMLK---SRELLQNFSEN-----HSITPFYSQQD 100
++Q DWP YS+ D+ L+ SR+L N S+N HS +P S +D
Sbjct: 447 ELQRDWPGYSEIDRRSLESVLSRKL--NPSQNAAGTSHSESPVCSSRD 492
>gi|417403577|gb|JAA48588.1| Putative rna polymerase ii elongation factor [Desmodus rotundus]
Length = 641
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEMDRQSLES 285
>gi|348587458|ref|XP_003479485.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Cavia
porcellus]
Length = 642
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDFVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 IQRDWPGYSEADRRALES 285
>gi|351709869|gb|EHB12788.1| RNA polymerase II elongation factor ELL2, partial [Heterocephalus
glaber]
Length = 575
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 68/107 (63%), Gaps = 12/107 (11%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L RDG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 143 DRVIHLLALKAYKKPELLARLQRDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 202
Query: 62 VQDDWPFYSQQDKNMLK---SRELLQNFSENHSIT-----PFYSQQD 100
+Q DWP YS+ D+ L+ +R+L N S+N + T P S +D
Sbjct: 203 LQRDWPGYSETDRRSLELVLARKL--NPSQNSAGTSRSESPVCSSRD 247
>gi|1946347|gb|AAC51232.1| RNA polymerase II elongation factor ELL2 [Homo sapiens]
gi|20306682|gb|AAH28412.1| Elongation factor, RNA polymerase II, 2 [Homo sapiens]
gi|123981266|gb|ABM82462.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
gi|123996099|gb|ABM85651.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
Length = 640
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEIDRRSLES 285
>gi|155722987|ref|NP_036213.2| RNA polymerase II elongation factor ELL2 [Homo sapiens]
gi|254763293|sp|O00472.2|ELL2_HUMAN RecName: Full=RNA polymerase II elongation factor ELL2
gi|119616466|gb|EAW96060.1| elongation factor, RNA polymerase II, 2 [Homo sapiens]
gi|261858606|dbj|BAI45825.1| elongation factor, RNA polymerase II, 2 [synthetic construct]
Length = 640
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEIDRRSLES 285
>gi|397504437|ref|XP_003822802.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Pan
paniscus]
Length = 640
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEIDRRSLES 285
>gi|417411071|gb|JAA51989.1| Putative rna polymerase ii elongation factor, partial [Desmodus
rotundus]
Length = 482
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 49 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 108
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 109 LQRDWPGYSEMDRQSLES 126
>gi|296194098|ref|XP_002744802.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Callithrix
jacchus]
Length = 640
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEMDRRSLES 285
>gi|62088266|dbj|BAD92580.1| elongation factor, RNA polymerase II, 2 variant [Homo sapiens]
Length = 519
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+ +
Sbjct: 87 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFKE 146
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 147 LQRDWPGYSEIDRRSLES 164
>gi|348510574|ref|XP_003442820.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Oreochromis niloticus]
Length = 707
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DRIIHLLA+RPYKK E+ A L RDGI +DRN + L +A +DN Y L+ +++
Sbjct: 241 FRDRIIHLLALRPYKKLEVLARLQRDGINQKDRNSLGTTLQQVANLNPKDNAYFLKDYIY 300
Query: 60 NDVQDDWPFYSQQDKNML 77
DVQ DWP YS+ +K+ +
Sbjct: 301 RDVQRDWPGYSEDEKSQI 318
>gi|156354196|ref|XP_001623286.1| predicted protein [Nematostella vectensis]
gi|156209969|gb|EDO31186.1| predicted protein [Nematostella vectensis]
Length = 516
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 56/79 (70%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L++R++HLLA+RPYKKPEL L +DG+ +D+N + +L +A +N Y L +H++ +
Sbjct: 263 LRERVLHLLAIRPYKKPELILRLRKDGVILKDKNTLTNLLQQVATISNNQYTLMKHIYAE 322
Query: 62 VQDDWPFYSQQDKNMLKSR 80
VQD WP Y+ +++ +++ +
Sbjct: 323 VQDTWPCYTDEERKVVQRK 341
>gi|355685836|gb|AER97865.1| elongation factor, RNA polymerase II, 2 [Mustela putorius furo]
Length = 523
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 204 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 263
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 264 LQRDWPGYSEIDRRSLES 281
>gi|159164316|pdb|2E5N|A Chain A, Solution Structure Of The Ell_n2 Domain Of Target Of Rna
Polymerase Ii Elongation Factor Ell2
Length = 100
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A ++D +Y L+ +V+
Sbjct: 15 RDRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNSKDLSYTLKDYVFK 74
Query: 61 DVQDDWPFYSQQDKNMLKS 79
++Q DWP YS+ D+ L+S
Sbjct: 75 ELQRDWPGYSEIDRRSLES 93
>gi|345321465|ref|XP_001509178.2| PREDICTED: RNA polymerase II elongation factor ELL-like, partial
[Ornithorhynchus anatinus]
Length = 222
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
++DR++HLLA++PYKKPEL L +DG+ D+ + +IL +A A+DNT L+ ++
Sbjct: 139 IKDRVMHLLALKPYKKPELILRLQKDGLVQPDKELLDSILQQVANTSAKDNTSTLKDCLY 198
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 199 KDVQKDWPGYSEGDQQLLK 217
>gi|441598525|ref|XP_004093148.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2 [Nomascus leucogenys]
Length = 640
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEIDRRSLES 285
>gi|317419075|emb|CBN81113.1| Ell2 protein [Dicentrarchus labrax]
Length = 690
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DRI+HLLA+R YKK E+ A L RDGI +DRN + L +A +DNTY L+ ++
Sbjct: 216 FRDRIVHLLALRSYKKLEVLARLQRDGINQKDRNSLGTTLQQVANLNPKDNTYSLKDFIY 275
Query: 60 NDVQDDWPFYSQQDKNML 77
DVQ DWP YS+ +K+ +
Sbjct: 276 RDVQRDWPGYSEDEKSQV 293
>gi|224087943|ref|XP_002195872.1| PREDICTED: RNA polymerase II elongation factor ELL, partial
[Taeniopygia guttata]
Length = 541
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA++PYKKPEL L +DG+ +D++ + +L +A A+D+T+ L+ V+
Sbjct: 155 FKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVY 214
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQ 98
+VQ DWP YS+ D+ +LK R L++ + + + F +
Sbjct: 215 KEVQKDWPGYSEGDQQLLK-RILVRKLCQPQNSSAFQGE 252
>gi|317419076|emb|CBN81114.1| RNA polymerase II elongation factor ELL2 [Dicentrarchus labrax]
Length = 614
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DRI+HLLA+R YKK E+ A L RDGI +DRN + L +A +DNTY L+ ++
Sbjct: 216 FRDRIVHLLALRSYKKLEVLARLQRDGINQKDRNSLGTTLQQVANLNPKDNTYSLKDFIY 275
Query: 60 NDVQDDWPFYSQQDKNML 77
DVQ DWP YS+ +K+ +
Sbjct: 276 RDVQRDWPGYSEDEKSQV 293
>gi|281346301|gb|EFB21885.1| hypothetical protein PANDA_017751 [Ailuropoda melanoleuca]
Length = 575
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 143 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 202
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 203 LQRDWPGYSEIDRRSLES 220
>gi|297675689|ref|XP_002815799.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Pongo abelii]
Length = 640
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 268 LQRDWPGYSEIDRRSLES 285
>gi|301784983|ref|XP_002927908.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ailuropoda melanoleuca]
Length = 578
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 145 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 204
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 205 LQRDWPGYSEIDRRSLES 222
>gi|61098133|ref|NP_001012865.1| RNA polymerase II elongation factor ELL [Gallus gallus]
gi|53128622|emb|CAG31318.1| hypothetical protein RCJMB04_5a13 [Gallus gallus]
Length = 610
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA++PYKKPEL L +DG+ +D++ + +L +A A+D+T+ L+ V+
Sbjct: 200 FKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVY 259
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQ 98
+VQ DWP YS+ D+ +LK R L++ + + + F +
Sbjct: 260 KEVQKDWPGYSEGDQQLLK-RILVRKLCQPQNSSGFQGE 297
>gi|147904647|ref|NP_001089664.1| elongation factor RNA polymerase II [Xenopus laevis]
gi|72679841|gb|AAI00240.1| MGC115518 protein [Xenopus laevis]
Length = 597
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA++PYKKPEL L +DG+ ++++ + ++L +A A+D TY L+ ++
Sbjct: 198 FKDRVVHLLALKPYKKPELILRLQKDGLSIQEKDLLDSLLQQVANLNAKDCTYTLKDCLY 257
Query: 60 NDVQDDWPFYSQQDKNMLK---SRELLQNFSENHSITP 94
+VQ DWP YS+ D +LK +R+LLQ +N S P
Sbjct: 258 KEVQKDWPGYSEGDHQLLKRILARKLLQQ--QNPSTQP 293
>gi|126323471|ref|XP_001362873.1| PREDICTED: RNA polymerase II elongation factor ELL isoform 1
[Monodelphis domestica]
Length = 611
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DRIIHLLA++PYKKPEL L +DG+ +D++ + ++L +A A+D+TY L+ ++
Sbjct: 200 FRDRIIHLLALKPYKKPELILRLQKDGLSQQDKDMLDSLLQQVANLSAKDSTYTLKDCMY 259
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DW YS+ D+ +LK
Sbjct: 260 KDVQKDWRGYSEGDQQLLK 278
>gi|395825652|ref|XP_003786038.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Otolemur
garnettii]
Length = 640
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 8/105 (7%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVSQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SREL--LQNF-SENHSITPFYSQQD 100
+Q DWP Y++ D+ L+ SR+L QN S + S +P S +D
Sbjct: 268 LQRDWPGYNEIDRRSLESVLSRKLNPSQNVASTSRSESPLCSSRD 312
>gi|114676139|ref|XP_001134697.1| PREDICTED: RNA polymerase II elongation factor ELL [Pan
troglodytes]
Length = 525
Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 174 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 233
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 234 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 264
>gi|395511271|ref|XP_003759884.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Sarcophilus
harrisii]
Length = 609
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL+A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 165 DRVIHLLALKTYKKPELFARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 224
Query: 62 VQDDWPFYSQQDKNMLK---SREL 82
+Q DWP Y++ D+ L+ SR+L
Sbjct: 225 LQKDWPGYNEIDRQSLELVLSRKL 248
>gi|410948988|ref|XP_004001557.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2 [Felis catus]
Length = 642
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 268 LQKDWPGYNEIDRRSLQS 285
>gi|350580940|ref|XP_003123844.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1 [Sus
scrofa]
Length = 640
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 12/107 (11%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK---SRELLQNFSENHSIT-----PFYSQQD 100
+Q DWP Y++ D+ L+ SR+L N S+N + T P S +D
Sbjct: 268 LQRDWPGYNEIDRRSLESVLSRKL--NSSQNAASTSRSESPVCSSRD 312
>gi|73952028|ref|XP_546016.2| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 1
[Canis lupus familiaris]
Length = 641
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 268 LQRDWPGYNELDRRSLES 285
>gi|395513209|ref|XP_003760821.1| PREDICTED: RNA polymerase II elongation factor ELL [Sarcophilus
harrisii]
Length = 594
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR+IHLLA++PYKKPEL L +DG+ +D++ + ++L +A A+D+TY L+ ++
Sbjct: 183 FRDRVIHLLALKPYKKPELILRLQKDGLLSQDKDTLDSLLQQVANLSAKDSTYTLKDCMY 242
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSI 92
DVQ DW YS+ D+ +LK R L++ + ++
Sbjct: 243 KDVQKDWRGYSEGDQQLLK-RILVRKLCQTQNV 274
>gi|334325737|ref|XP_001364314.2| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Monodelphis domestica]
Length = 647
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 9/106 (8%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 209 DRVIHLLALKTYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 268
Query: 62 VQDDWPFYSQQDKNMLK---SREL---LQN-FSENHSITPFYSQQD 100
+Q DWP Y++ D+ L+ SR+L QN S S +P S +D
Sbjct: 269 LQKDWPGYNEIDRQSLELVLSRKLNPSPQNATSTTGSESPICSNKD 314
>gi|326934550|ref|XP_003213351.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Meleagris
gallopavo]
Length = 709
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA++PYKKPEL L +DG+ +D++ + +L +A A+D+T+ L+ V+
Sbjct: 298 FKDRVVHLLALKPYKKPELILRLQKDGLSQQDKDLLDNLLQQVANLSAKDSTFTLKDCVY 357
Query: 60 NDVQDDWPFYSQQDKNMLK 78
+VQ DWP YS+ D+ +LK
Sbjct: 358 KEVQKDWPGYSEGDQQLLK 376
>gi|147907252|ref|NP_001087129.1| elongation factor, RNA polymerase II, 2 [Xenopus laevis]
gi|50417760|gb|AAH78032.1| MGC82755 protein [Xenopus laevis]
Length = 494
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
++R+IHLLA++PYKKPE+ A L +DG+ +D+N + IL +A +DN+Y L+ V+
Sbjct: 203 RERVIHLLALKPYKKPEILARLHKDGVNQKDKNSLGVILQQVANLNPKDNSYTLKDFVFK 262
Query: 61 DVQDDWPFYSQQDKNML 77
++Q DWP Y + DK++L
Sbjct: 263 EIQRDWPGYLEVDKHLL 279
>gi|194220055|ref|XP_001918212.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Equus
caballus]
Length = 579
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 146 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 205
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 206 LQRDWPGYNEIDRRSLES 223
>gi|402872128|ref|XP_003899987.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Papio
anubis]
Length = 640
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 268 LQRDWPGYNEIDRRSLES 285
>gi|109078054|ref|XP_001094059.1| PREDICTED: RNA polymerase II elongation factor ELL2 isoform 2
[Macaca mulatta]
Length = 640
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLRKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 268 LQRDWPGYNEIDRRSLES 285
>gi|395545599|ref|XP_003774687.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Sarcophilus harrisii]
Length = 636
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ ++D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 206 DRVIHLLALKTYKKPELLARLQKDGVNEKDKNSLEAILQQVANLNPKDLSYTLKDNVFKE 265
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP Y++ D+ L+
Sbjct: 266 LQKDWPGYNEIDRQSLE 282
>gi|296485037|tpg|DAA27152.1| TPA: elongation factor, RNA polymerase II, 2 [Bos taurus]
Length = 642
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + A+L +A +D +Y L+ +V+ +
Sbjct: 210 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAVLQQVANLNPKDLSYTLKDYVFKE 269
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 270 LQRDWPGYNEIDRRSLES 287
>gi|329755297|ref|NP_001178075.1| RNA polymerase II elongation factor ELL2 [Bos taurus]
Length = 642
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + A+L +A +D +Y L+ +V+ +
Sbjct: 210 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAVLQQVANLNPKDLSYTLKDYVFKE 269
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 270 LQRDWPGYNEIDRRSLES 287
>gi|159164276|pdb|2DOA|A Chain A, Solution Structure Of The Helical Domain In Human Eleven-
Nineteen Lysine-Rich Leukemia Protein Ell
Length = 104
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++ D
Sbjct: 15 DRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMYKD 74
Query: 62 VQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
VQ DWP YS+ D+ +LK R L++ S S
Sbjct: 75 VQKDWPGYSEGDQQLLK-RVLVRKLSGPSS 103
>gi|440903168|gb|ELR53864.1| RNA polymerase II elongation factor ELL2, partial [Bos grunniens
mutus]
Length = 591
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + A+L +A +D +Y L+ +V+ +
Sbjct: 159 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAVLQQVANLNPKDLSYTLKDYVFKE 218
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 219 LQRDWPGYNEIDRRSLES 236
>gi|351703751|gb|EHB06670.1| RNA polymerase II elongation factor ELL2 [Heterocephalus glaber]
Length = 260
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 16/110 (14%)
Query: 6 IIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWNDVQ 63
+IHLLA + YKKPEL A L RDG+ +D+N + AIL +A +D +Y L+ +V+ ++Q
Sbjct: 14 VIHLLAPKAYKKPELLARLQRDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKELQ 73
Query: 64 DDWPFYSQQDKNMLKS---REL---------LQNFSENHSITPFYSQQDK 101
DWP YS D+ L+S R+L + +FS+N SI + QQDK
Sbjct: 74 RDWPGYSDTDRWSLESVLARKLNPSGPQYLRVDSFSQNGSI--YEDQQDK 121
>gi|426231162|ref|XP_004009609.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Ovis aries]
Length = 711
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + A+L +A +D +Y L+ +V+ +
Sbjct: 279 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAVLQQVANLNPKDLSYTLKDYVFKE 338
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 339 LQRDWPGYNEIDRRSLES 356
>gi|291395028|ref|XP_002713987.1| PREDICTED: elongation factor, RNA polymerase II, 2 [Oryctolagus
cuniculus]
Length = 640
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y+ D+ L+S
Sbjct: 268 LQRDWPGYNDLDRRALES 285
>gi|260813627|ref|XP_002601518.1| hypothetical protein BRAFLDRAFT_95758 [Branchiostoma floridae]
gi|229286816|gb|EEN57530.1| hypothetical protein BRAFLDRAFT_95758 [Branchiostoma floridae]
Length = 614
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWND 61
++R+IHLLA++PYKKPEL L +DGI D+ + IL IA +D+ Y L + ++D
Sbjct: 274 RERVIHLLAMKPYKKPELILRLNKDGI--SDKTLLPDILKEIATLGKDDNYTLNKTAFSD 331
Query: 62 VQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQD 100
VQ+DWPFY+ +++ ++K R L ++ S +P + D
Sbjct: 332 VQEDWPFYTSEERQLVKRR--LAQMRQSPSCSPTTTTHD 368
>gi|431907914|gb|ELK11521.1| RNA polymerase II elongation factor ELL2 [Pteropus alecto]
Length = 641
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKTYKKPELLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y+ D+ L+S
Sbjct: 268 LQRDWPGYNDIDRRSLES 285
>gi|355755623|gb|EHH59370.1| hypothetical protein EGM_09458, partial [Macaca fascicularis]
Length = 576
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 162 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 221
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSI 92
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 222 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQST 253
>gi|441628712|ref|XP_003275964.2| PREDICTED: RNA polymerase II elongation factor ELL [Nomascus
leucogenys]
Length = 755
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|395750766|ref|XP_003780576.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL, partial [Pongo abelii]
Length = 299
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 216 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 275
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 276 KDVQKDWPGYSEGDQQLLK 294
>gi|109123965|ref|XP_001115395.1| PREDICTED: RNA polymerase II elongation factor ELL [Macaca mulatta]
Length = 573
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 159 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 218
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSI 92
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 219 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQST 250
>gi|301621843|ref|XP_002940254.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL [Xenopus (Silurana) tropicalis]
Length = 602
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA++PYKKPEL L +DG+ ++++ + +L +A A+D TY L+ ++
Sbjct: 198 FKDRVVHLLALKPYKKPELILRLQKDGLSVQEKDLLDGLLQQVANLSAKDCTYTLKDCLY 257
Query: 60 NDVQDDWPFYSQQDKNMLK---SRELLQNFSENHSITP 94
+VQ DWP YS+ D+ +LK +R+LLQ +N S P
Sbjct: 258 KEVQKDWPGYSEGDQQLLKRILARKLLQQ--QNPSTQP 293
>gi|402904807|ref|XP_003915230.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Papio
anubis]
Length = 573
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 159 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 218
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSI 92
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 219 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQST 250
>gi|410921254|ref|XP_003974098.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 625
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 13/102 (12%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRN------QMMAILNGIAFARDNTYHLQ 55
L++R++HLLA++PYKKPEL L +DG++ D++ Q +A LNG RDNT+ L+
Sbjct: 198 LRERLLHLLALKPYKKPELILRLQKDGLQQSDKDCLNSHLQQVANLNG----RDNTFTLK 253
Query: 56 RHVWNDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYS 97
++ ++Q DWP Y++ D+ +LK R L + +N S P S
Sbjct: 254 DFLYKEIQKDWPGYTEGDQQLLK-RILFRK--QNSSAPPLES 292
>gi|432938679|ref|XP_004082541.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Oryzias
latipes]
Length = 610
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++RI+H+LA+RPYK+PEL L RDG+ +++ + + L+ +A RDNT+ L+ +
Sbjct: 210 LRERIMHVLALRPYKRPELILRLQRDGLTGEEKDGLESALSEVAQLSGRDNTFVLKESFY 269
Query: 60 NDVQDDWPFYSQQDKNMLK 78
D++ DWP Y+ D+ +LK
Sbjct: 270 KDLRKDWPGYTPGDQQLLK 288
>gi|344265401|ref|XP_003404773.1| PREDICTED: RNA polymerase II elongation factor ELL2 [Loxodonta
africana]
Length = 657
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL A L +DG+ +D+N + IL +A +D +Y L+ +V+ +
Sbjct: 221 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGTILQQVANLNPKDLSYTLKDYVFKE 280
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP Y++ D+ L+S
Sbjct: 281 LQRDWPGYNEIDRRSLES 298
>gi|432858960|ref|XP_004069024.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 682
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L+DRIIHLLA++ YKK E+ L RDGI +DRN + L +A +DNTY L+ ++
Sbjct: 229 LRDRIIHLLALKSYKKLEVLGRLQRDGINQKDRNSLGTTLQQVANLNPKDNTYSLKDFIY 288
Query: 60 NDVQDDWPFYSQQDKNML 77
DVQ DWP YS ++K +
Sbjct: 289 RDVQRDWPGYSDEEKTQV 306
>gi|149757364|ref|XP_001500713.1| PREDICTED: RNA polymerase II elongation factor ELL [Equus caballus]
Length = 592
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D+T L+ V+
Sbjct: 186 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANVNAKDSTCTLKDCVY 245
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 246 KDVQKDWPGYSEGDQQLLK-RMLIRKLCQPQS 276
>gi|345325610|ref|XP_001512162.2| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ornithorhynchus anatinus]
Length = 627
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPE+ A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 191 DRVIHLLALKTYKKPEILARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 250
Query: 62 VQDDWPFYSQQDKNMLK---SREL 82
+Q DWP Y++ D+ L+ SR+L
Sbjct: 251 LQKDWPGYNEIDRQSLELILSRKL 274
>gi|297718662|gb|ADI50266.1| elongation factor RNA polymerase II [Gobiocypris rarus]
Length = 515
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/95 (36%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++R++HLLA++PY+KPEL LT++G+ +D+ + ++L +A ++DNT+ L+ ++
Sbjct: 160 LRERLVHLLALKPYRKPELLVRLTKEGLSPQDKETLDSLLQQVANLNSKDNTFTLKDCLF 219
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITP 94
+VQ DWP Y++ D+ +LK R L++ + S P
Sbjct: 220 KEVQKDWPGYTEVDQQILK-RILVRKLCKPQSSAP 253
>gi|344241335|gb|EGV97438.1| RNA polymerase II elongation factor ELL [Cricetulus griseus]
Length = 545
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A RD+T LQ ++
Sbjct: 142 FRDRVLHLLALRPYRKAELLLRLQKDGLTQSDKDTLDSLLQQVASVNPRDSTCTLQDCMY 201
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 202 KDVQKDWPGYSEGDQQLLK 220
>gi|41054381|ref|NP_956001.1| RNA polymerase II elongation factor ELL [Danio rerio]
gi|37046873|gb|AAH58072.1| Elongation factor RNA polymerase II [Danio rerio]
Length = 633
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/95 (37%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++R++HLLA++PY+KPEL LT+DG+ +D+ + ++L +A ++DNT+ L+ ++
Sbjct: 196 LRERLVHLLALKPYRKPELLVRLTKDGLSFQDKETLDSLLQQVANLNSKDNTFTLKDCLF 255
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITP 94
+VQ DWP Y++ D+ +LK R L++ + S P
Sbjct: 256 KEVQKDWPGYTEVDQQILK-RILVRKLCKPQSNAP 289
>gi|344283083|ref|XP_003413302.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Loxodonta
africana]
Length = 759
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L RDG+ D++ + +L +A A+D T L+ ++
Sbjct: 367 FRDRVLHLLALRPYRKAELLLRLQRDGLSQPDKDALDGLLQQVANVSAKDGTCTLKDSMY 426
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYS 97
DVQ DWP YS+ D+ +L+ R L++ + + F S
Sbjct: 427 KDVQRDWPGYSEGDRQLLQ-RMLVRKVCQPQGASTFPS 463
>gi|255958275|ref|NP_001077281.2| elongation factor, RNA polymerase II, 2 [Danio rerio]
Length = 655
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 201 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 260
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 261 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 307
>gi|354473872|ref|XP_003499156.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Cricetulus
griseus]
Length = 692
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFA--RDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A RD+T LQ ++
Sbjct: 289 FRDRVLHLLALRPYRKAELLLRLQKDGLTQSDKDTLDSLLQQVASVNPRDSTCTLQDCMY 348
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 349 KDVQKDWPGYSEGDQQLLK 367
>gi|47215192|emb|CAG01399.1| unnamed protein product [Tetraodon nigroviridis]
Length = 672
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
+DRI+HLLA+R YKK E+ A L RDGI +DRN + + L +A +DNTY L+ ++
Sbjct: 199 FRDRIVHLLALRSYKKLEVLARLQRDGINQKDRNSLGSALQQVATLNPKDNTYSLKDCIY 258
Query: 60 NDVQDDWPFYSQQDKNMLK 78
VQ DWP YS+ +K ++
Sbjct: 259 RYVQRDWPGYSEDEKTQVE 277
>gi|355691491|gb|EHH26676.1| RNA polymerase II elongation factor ELL2, partial [Macaca mulatta]
Length = 590
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA++ KKPE A L +DG+ +D+N + AIL +A +D +Y L+ +V+
Sbjct: 158 KDRVIHLLALKACKKPEPLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFK 217
Query: 61 DVQDDWPFYSQQDKNMLKS 79
++Q DWP YS+ D+ L+S
Sbjct: 218 ELQRDWPGYSEIDRRSLES 236
>gi|119605113|gb|EAW84707.1| elongation factor RNA polymerase II, isoform CRA_a [Homo sapiens]
Length = 605
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 191 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 250
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 251 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 281
>gi|5729812|ref|NP_006523.1| RNA polymerase II elongation factor ELL [Homo sapiens]
gi|1706635|sp|P55199.1|ELL_HUMAN RecName: Full=RNA polymerase II elongation factor ELL; AltName:
Full=Eleven-nineteen lysine-rich leukemia protein
gi|601793|gb|AAA57120.1| ELL [Homo sapiens]
gi|29165820|gb|AAH49195.1| Elongation factor RNA polymerase II [Homo sapiens]
gi|119605114|gb|EAW84708.1| elongation factor RNA polymerase II, isoform CRA_b [Homo sapiens]
Length = 621
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|397493869|ref|XP_003817818.1| PREDICTED: RNA polymerase II elongation factor ELL [Pan paniscus]
Length = 621
Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|348558872|ref|XP_003465240.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Cavia
porcellus]
Length = 594
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L RDG+ D++ + +L +A A+D T L+ ++
Sbjct: 206 FRDRVLHLLALRPYRKAELLLRLQRDGLAQADKDALDGLLQQMANVSAKDGTCTLRDCMY 265
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITP 94
DVQ DWP YS+ D+ +LK R L++ + S+ P
Sbjct: 266 KDVQRDWPGYSEGDQQLLK-RVLVRKPCQPQSVEP 299
>gi|355750076|gb|EHH54414.1| RNA polymerase II elongation factor ELL2, partial [Macaca
fascicularis]
Length = 590
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ KKPE A L +DG+ +D+N + AIL +A +D +Y L+ +V+ +
Sbjct: 159 DRVIHLLALKACKKPEPLARLQKDGVNQKDKNSLGAILQQVANLNPKDLSYTLKDYVFKE 218
Query: 62 VQDDWPFYSQQDKNMLKS 79
+Q DWP YS+ D+ L+S
Sbjct: 219 LQRDWPGYSEIDRRSLES 236
>gi|410222566|gb|JAA08502.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410259612|gb|JAA17772.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410294514|gb|JAA25857.1| elongation factor RNA polymerase II [Pan troglodytes]
gi|410352777|gb|JAA42992.1| elongation factor RNA polymerase II [Pan troglodytes]
Length = 621
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|62087168|dbj|BAD92031.1| elongation factor RNA polymerase II variant [Homo sapiens]
Length = 565
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 151 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 210
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 211 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 241
>gi|426387822|ref|XP_004060361.1| PREDICTED: RNA polymerase II elongation factor ELL [Gorilla gorilla
gorilla]
Length = 564
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 150 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 209
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 210 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 240
>gi|158259671|dbj|BAF85794.1| unnamed protein product [Homo sapiens]
Length = 621
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|55250662|gb|AAH85600.1| Ell2 protein, partial [Danio rerio]
Length = 626
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 212 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 271
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 272 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 318
>gi|431922019|gb|ELK19192.1| RNA polymerase II elongation factor ELL [Pteropus alecto]
Length = 610
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A A+D T L+ V+
Sbjct: 204 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDMLDSLLQQVANVNAKDGTCTLKDCVY 263
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 264 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 294
>gi|115313035|gb|AAI24150.1| Ell2 protein [Danio rerio]
Length = 636
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 220 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 279
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 280 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 326
>gi|998549|gb|AAB34056.1| MEN chimeric transcription factor [Homo sapiens]
Length = 576
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 162 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 221
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 222 KDVQKDWPGYSEGDQQLLK 240
>gi|417403292|gb|JAA48457.1| Putative rna polymerase ii elongation factor [Desmodus rotundus]
Length = 610
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A A+D T L+ V+
Sbjct: 204 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDTLDSLLQQVANVNAKDGTCTLKDCVY 263
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 264 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 294
>gi|79158628|gb|AAI08017.1| Ell2 protein, partial [Danio rerio]
Length = 641
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 225 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 284
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 285 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 331
>gi|34783805|gb|AAH56829.1| Ell2 protein, partial [Danio rerio]
Length = 628
Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 211 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 270
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 271 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 317
>gi|403303437|ref|XP_003942333.1| PREDICTED: RNA polymerase II elongation factor ELL [Saimiri
boliviensis boliviensis]
Length = 621
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|355703328|gb|EHH29819.1| Eleven-nineteen lysine-rich leukemia protein [Macaca mulatta]
Length = 621
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|300797566|ref|NP_001179027.1| RNA polymerase II elongation factor ELL [Bos taurus]
gi|296486201|tpg|DAA28314.1| TPA: elongation factor RNA polymerase II [Bos taurus]
Length = 616
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A A+D T L+ V+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDSLLQQVANVNAKDGTCTLKDCVY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 297
>gi|384949640|gb|AFI38425.1| RNA polymerase II elongation factor ELL [Macaca mulatta]
Length = 621
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|348510673|ref|XP_003442869.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 618
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
L++R++HLLA+RPY++PEL L +DG+ D+N + ++L + +RD+TY L+ ++
Sbjct: 211 LRERVMHLLALRPYRRPELILRLQKDGLTAGDKNMLDSVLMEVTKLNSRDSTYVLKDSLY 270
Query: 60 NDVQDDWPFYSQQDKNMLK 78
++Q DWP Y+ D+ +LK
Sbjct: 271 KELQKDWPGYTSGDQQLLK 289
>gi|94573522|gb|AAI16572.1| Ell2 protein [Danio rerio]
Length = 675
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWN 60
+DR+IHLLA+R YKK E+ A L RDG+ +DRN + L+ +A +DN+Y L+ ++
Sbjct: 221 RDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLHQVANLNPKDNSYSLKDFIFR 280
Query: 61 DVQDDWPFYSQQDK---NMLKSRELLQNFSENHSITPFYSQQDKNMLKR 106
+VQ DWP Y++ D+ + + +R+L N S +P +++ + LKR
Sbjct: 281 EVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSP--TKEPTSPLKR 327
>gi|73986120|ref|XP_541936.2| PREDICTED: RNA polymerase II elongation factor ELL [Canis lupus
familiaris]
Length = 613
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ V+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDGLLQQVANVNAKDGTCTLKDCVY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 297
>gi|410950878|ref|XP_003982129.1| PREDICTED: RNA polymerase II elongation factor ELL [Felis catus]
Length = 613
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ V+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDGLLQQVANVNAKDGTCTLKDCVY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 297
>gi|301753927|ref|XP_002912776.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Ailuropoda
melanoleuca]
Length = 613
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ V+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDGLLQQVANVNAKDGTCTLKDCVY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 297
>gi|440904017|gb|ELR54590.1| RNA polymerase II elongation factor ELL, partial [Bos grunniens
mutus]
Length = 582
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A A+D T L+ V+
Sbjct: 170 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDSLLQQVANVNAKDGTCTLKDCVY 229
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 230 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 260
>gi|281343539|gb|EFB19123.1| hypothetical protein PANDA_000556 [Ailuropoda melanoleuca]
Length = 623
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ V+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDALDGLLQQVANVNAKDGTCTLKDCVY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RMLVRKLCQPQS 297
>gi|380804503|gb|AFE74127.1| RNA polymerase II elongation factor ELL, partial [Macaca mulatta]
Length = 279
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T LQ ++
Sbjct: 203 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLQDCMY 262
Query: 60 NDVQDDWPFYSQQDKNM 76
DVQ DWP YS+ D+ +
Sbjct: 263 KDVQKDWPGYSEGDQQL 279
>gi|351699761|gb|EHB02680.1| RNA polymerase II elongation factor ELL, partial [Heterocephalus
glaber]
Length = 557
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ V+
Sbjct: 160 FRDRVLHLLALRPYRKAELLLRLQKDGLAQVDKDALDGLLQQVANVSAKDGTCTLRDCVY 219
Query: 60 NDVQDDWPFYSQQDKNMLK---SRELLQ 84
DVQ DWP YS+ D+ +LK +R+L Q
Sbjct: 220 KDVQKDWPGYSEGDQQLLKRVLTRKLCQ 247
>gi|47208953|emb|CAF92244.1| unnamed protein product [Tetraodon nigroviridis]
Length = 653
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 56/79 (70%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++R++HLLA++PYKKPEL L +DG++ D++ + + L +A ++DNT+ L+ +
Sbjct: 204 LRERLLHLLALKPYKKPELILRLQKDGLQQSDKDCLNSHLQQVANLNSKDNTFTLKDFFY 263
Query: 60 NDVQDDWPFYSQQDKNMLK 78
++Q DWP Y++ D+ +LK
Sbjct: 264 KEIQKDWPGYTEGDQQLLK 282
>gi|395847927|ref|XP_003796615.1| PREDICTED: RNA polymerase II elongation factor ELL [Otolemur
garnettii]
Length = 619
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ ++
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGLAQADKDTLDGLLQQVANVSAKDGTCTLRDCMY 266
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 267 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 297
>gi|348527690|ref|XP_003451352.1| PREDICTED: RNA polymerase II elongation factor ELL [Oreochromis
niloticus]
Length = 622
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++R++HLLA++PYKKPEL L +DG+ D++ + + L IA R+NT+ L+ ++
Sbjct: 199 LRERLVHLLALKPYKKPELILRLQKDGLLPLDKDSLDSHLQQIANLNGRENTFTLKDFLY 258
Query: 60 NDVQDDWPFYSQQDKNMLK 78
++Q DWP Y++ D+ +LK
Sbjct: 259 KEIQKDWPGYTEGDQQLLK 277
>gi|296233302|ref|XP_002761954.1| PREDICTED: RNA polymerase II elongation factor ELL, partial
[Callithrix jacchus]
Length = 560
Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + +L +A A+D T L+ ++
Sbjct: 146 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLRDCMY 205
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
DVQ DWP YS+ D+ +LK R L++ + S
Sbjct: 206 KDVQKDWPGYSEGDQQLLK-RVLVRKLCQPQS 236
>gi|157822233|ref|NP_001100774.1| RNA polymerase II elongation factor ELL [Rattus norvegicus]
gi|149036043|gb|EDL90709.1| elongation factor RNA polymerase II (predicted) [Rattus norvegicus]
Length = 604
Score = 68.2 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFA--RDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A +D T LQ ++
Sbjct: 204 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDTLDSLLQQVASVNPKDGTCTLQDCMY 263
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSIT 93
+VQ DWP YS+ D+ +LK R L++ + S T
Sbjct: 264 KNVQKDWPGYSEGDQQLLK-RVLMRKLCQPQSAT 296
>gi|124358953|ref|NP_031950.2| RNA polymerase II elongation factor ELL [Mus musculus]
gi|341940493|sp|O08856.2|ELL_MOUSE RecName: Full=RNA polymerase II elongation factor ELL; AltName:
Full=Eleven-nineteen lysine-rich leukemia protein
gi|74186604|dbj|BAE34775.1| unnamed protein product [Mus musculus]
gi|148696896|gb|EDL28843.1| elongation factor RNA polymerase II [Mus musculus]
Length = 602
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A +D T LQ ++
Sbjct: 204 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDTLDSLLQQVASVNPKDGTCTLQDCMY 263
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSIT 93
+Q DWP YS+ D+ +LK R L++ + + T
Sbjct: 264 KSLQKDWPGYSEGDRQLLK-RMLMRKLCQPQNAT 296
>gi|1947073|gb|AAC53150.1| ELL [Mus musculus]
gi|15928703|gb|AAH14816.1| Elongation factor RNA polymerase II [Mus musculus]
gi|19353178|gb|AAH24894.1| Elongation factor RNA polymerase II [Mus musculus]
Length = 602
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ D++ + ++L +A +D T LQ ++
Sbjct: 204 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDTLDSLLQQVASVNPKDGTCTLQDCMY 263
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHSIT 93
+Q DWP YS+ D+ +LK R L++ + + T
Sbjct: 264 KSLQKDWPGYSEGDRQLLK-RMLMRKLCQPQNAT 296
>gi|432852932|ref|XP_004067457.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 453
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFA--RDNTYHLQRHVW 59
L+DRIIHLLA++PY+KPEL L R+ +D+ ++ A+L +A +D++Y L+ +
Sbjct: 200 LKDRIIHLLALKPYRKPELLLWLERERSAPKDKAELGAVLEEVAKVSLKDSSYLLRDDFY 259
Query: 60 NDVQDDWPFYSQQDKNML 77
VQ DWP YS+++K ++
Sbjct: 260 KYVQRDWPCYSEEEKQLI 277
>gi|348500238|ref|XP_003437680.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 474
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
L+DRI+HLLA++PYKKPEL L R+ +D+ ++ AIL +A +D++Y L+ +
Sbjct: 200 LKDRILHLLALKPYKKPELLLWLERERASPKDKAELGAILEEVAKLNPKDSSYSLRDDFY 259
Query: 60 NDVQDDWPFYSQQDKNML 77
VQ DWP Y++++K ++
Sbjct: 260 RHVQRDWPGYNEEEKQLV 277
>gi|350595944|ref|XP_003484209.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Sus
scrofa]
Length = 609
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKKPEL L +DGI DRN + IL +A +D +Y L+ +V+ +
Sbjct: 215 DRVIHLLALKNYKKPELLLRLQKDGISQNDRNSLGKILEQVANLNTQDYSYTLKDYVFQE 274
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP YS ++ L+
Sbjct: 275 LQRDWPGYSDLERQSLE 291
>gi|432854415|ref|XP_004067890.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Oryzias
latipes]
Length = 623
Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L++R++HLLA++PY+KPEL L RDG+ D++ + + L +A ++D+T+ L+ +
Sbjct: 202 LRERLMHLLALKPYRKPELILRLQRDGLSQLDKDSLDSHLQQVANLNSKDSTFTLKDFLL 261
Query: 60 NDVQDDWPFYSQQDKNMLK 78
D+Q DWP Y++ D +LK
Sbjct: 262 KDIQKDWPGYTEGDLQLLK 280
>gi|410926659|ref|XP_003976795.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 376
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFA--RDNTYHLQRHVW 59
++RIIHLLA++ Y+KPEL + R+ RD+ ++ IL +A +D++Y L+ H +
Sbjct: 185 FRERIIHLLALKAYRKPELLLWMERERASPRDKAELGGILEEVAKVNPKDSSYMLRDHFY 244
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFS 87
VQ DWP YS+++K ML R L + +S
Sbjct: 245 KLVQKDWPSYSEEEK-MLIGRLLARMYS 271
>gi|348506220|ref|XP_003440658.1| PREDICTED: RNA polymerase II elongation factor ELL-like
[Oreochromis niloticus]
Length = 523
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
L+DRIIHLLA++PY+KPEL L R+ +D+ + ++L +A +D++Y L+ ++
Sbjct: 196 LRDRIIHLLALKPYRKPELLLWLDRERATPKDKADLTSVLEEVAKLSPKDHSYSLKDELY 255
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
VQ DWP Y +++K ++ R L++ HS
Sbjct: 256 RHVQRDWPGYLEEEKQLIH-RLLIRKLQPLHS 286
>gi|432105422|gb|ELK31637.1| RNA polymerase II elongation factor ELL [Myotis davidii]
Length = 508
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +DG+ ++ + ++L +A +D L+ V+
Sbjct: 204 FRDRVLHLLALRPYQKAELLLQLQKDGLVQAHKDTLDSLLQQVANMNTKDGICTLKDCVY 263
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 264 KDVQKDWPGYSEGDQQLLK 282
>gi|109511341|ref|XP_001070647.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Rattus
norvegicus]
gi|293351257|ref|XP_002727731.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Rattus
norvegicus]
Length = 634
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNT--YHLQRHVW 59
+DR+IHLLA++ YKK EL L +DGI+ D N + IL +A T Y L+ ++
Sbjct: 214 FRDRVIHLLALKDYKKSELLVQLQKDGIKINDSNFLGKILLQVANLNATTLSYTLKDSIF 273
Query: 60 NDVQDDWPFYSQQDKNML 77
+VQ DWP Y+++DK L
Sbjct: 274 KEVQRDWPGYNKEDKQSL 291
>gi|410907233|ref|XP_003967096.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Takifugu
rubripes]
Length = 550
Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILN--GIAFARDNTYHLQRHVW 59
L+DRIIH LA++PY+KPEL L R+ +D+ + ++L G +DN+Y L+ +
Sbjct: 146 LRDRIIHHLALKPYRKPELLLWLERERAGPKDKADLTSVLEEVGKLNPKDNSYALKDEFY 205
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
VQ DWP Y +++K + R L++ ++HS
Sbjct: 206 RHVQRDWPGYLEEEKQFVH-RLLIRKLQQHHS 236
>gi|256052883|ref|XP_002569978.1| ell related [Schistosoma mansoni]
Length = 740
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++RIIH+LA+RPY++PEL L+RDG+ + Q+ IL+ + R + Y+L V +
Sbjct: 107 LRERIIHILALRPYQRPELLLRLSRDGLSHTQKEQISDILSSVGRVGRQSAYYLIPSVVS 166
Query: 61 DVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDKN 102
++ +WP Y+ ++ R ++ + S TP S D++
Sbjct: 167 ELDANWPGYTGAER-----RRIISLKTSQQSQTPPKSPTDRS 203
>gi|47214209|emb|CAG00837.1| unnamed protein product [Tetraodon nigroviridis]
Length = 178
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFA--RDNTYHLQRHVW 59
++RIIHLLA++ Y+KPEL + ++ RD+ ++ IL +A +D +Y LQ H +
Sbjct: 96 FRERIIHLLALKAYRKPELLLWMEQEKASPRDKAELGGILEEVAKVNPKDGSYVLQDHFY 155
Query: 60 NDVQDDWPFYSQQDKNML 77
VQ DWP YS++++ ++
Sbjct: 156 RLVQKDWPNYSEEERRLI 173
>gi|353231690|emb|CCD79045.1| ell related [Schistosoma mansoni]
Length = 740
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++RIIH+LA+RPY++PEL L+RDG+ + Q+ IL+ + R + Y+L V +
Sbjct: 107 LRERIIHILALRPYQRPELLLRLSRDGLSHTQKEQISDILSSVGRVGRQSAYYLIPSVVS 166
Query: 61 DVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDKN 102
++ +WP Y+ ++ R ++ + S TP S D++
Sbjct: 167 ELDANWPGYTGAER-----RRIISLKTSQQSQTPPKSPTDRS 203
>gi|256052881|ref|XP_002569977.1| ell related [Schistosoma mansoni]
Length = 840
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++RIIH+LA+RPY++PEL L+RDG+ + Q+ IL+ + R + Y+L V +
Sbjct: 207 LRERIIHILALRPYQRPELLLRLSRDGLSHTQKEQISDILSSVGRVGRQSAYYLIPSVVS 266
Query: 61 DVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDKN 102
++ +WP Y+ ++ R ++ + S TP S D++
Sbjct: 267 ELDANWPGYTGAER-----RRIISLKTSQQSQTPPKSPTDRS 303
>gi|353231689|emb|CCD79044.1| ell related [Schistosoma mansoni]
Length = 840
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++RIIH+LA+RPY++PEL L+RDG+ + Q+ IL+ + R + Y+L V +
Sbjct: 207 LRERIIHILALRPYQRPELLLRLSRDGLSHTQKEQISDILSSVGRVGRQSAYYLIPSVVS 266
Query: 61 DVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDKN 102
++ +WP Y+ ++ R ++ + S TP S D++
Sbjct: 267 ELDANWPGYTGAER-----RRIISLKTSQQSQTPPKSPTDRS 303
>gi|358420758|ref|XP_003584723.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bos
taurus]
Length = 755
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L RDG+ + + + + IL +A ++ +Y L+ V+ +
Sbjct: 338 DRVIHLLALKDYKKHELLVRLQRDGMTEEEMDSLGKILQEVAHLNTQNRSYSLKNCVFKE 397
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP YS+ D+ L+
Sbjct: 398 LQKDWPGYSEVDRQTLE 414
>gi|432110995|gb|ELK34467.1| RNA polymerase II elongation factor ELL [Myotis davidii]
Length = 506
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVW 59
+DR++HLLA+RPY+K EL L +D + ++ + ++L +A +D + L+ V+
Sbjct: 225 FRDRVLHLLALRPYQKAELLLQLQKDSLAQAHKDTLDSLLQQVANMNTKDGSCTLKDCVY 284
Query: 60 NDVQDDWPFYSQQDKNMLK 78
DVQ DWP YS+ D+ +LK
Sbjct: 285 KDVQKDWPGYSEGDQQLLK 303
>gi|359081561|ref|XP_003588145.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Bos
taurus]
Length = 625
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L RDG+ + + + + IL +A ++ +Y L+ V+ +
Sbjct: 208 DRVIHLLALKDYKKHELLVRLQRDGMTEEEMDSLGKILQEVAHLNTQNRSYSLKNCVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP YS+ D+ L+
Sbjct: 268 LQKDWPGYSEVDRQTLE 284
>gi|410989541|ref|XP_004001019.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Felis
catus]
Length = 662
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L +DGI D N + IL +A ++ +Y L+ +V+ +
Sbjct: 242 DRVIHLLALKAYKKSELLLRLQKDGITKDDENTLGEILQQVANLNTQNFSYTLKDYVFKE 301
Query: 62 VQDDWPFYSQQDKNMLK 78
V DWP YS+ D+ L+
Sbjct: 302 VHKDWPGYSELDRQSLE 318
>gi|410898661|ref|XP_003962816.1| PREDICTED: RNA polymerase II elongation factor ELL-like [Takifugu
rubripes]
Length = 584
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L+DR+IHLL +RPYK+ EL L RDG+ D + + + +L + + +T+ L+ ++
Sbjct: 212 LRDRVIHLLVLRPYKRSELVLRLRRDGVTDGEGDGLEPVLREVGELSCGDTFVLKNGLFK 271
Query: 61 DVQDDWPFYSQQDKNMLK 78
DVQ DWP Y+ ++ +LK
Sbjct: 272 DVQKDWPGYTAGERQLLK 289
>gi|301778247|ref|XP_002924541.1| PREDICTED: RNA polymerase II elongation factor ELL2-like
[Ailuropoda melanoleuca]
Length = 626
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L +DGI ++N + IL +A ++ +Y L+ +V+ +
Sbjct: 208 DRVIHLLALKDYKKHELLIRLEKDGITKTEKNSLGEILRQVANLNTQNFSYTLKDYVFKE 267
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP Y++ +K LK
Sbjct: 268 LQKDWPGYNEAEKQSLK 284
>gi|281343280|gb|EFB18864.1| hypothetical protein PANDA_013909 [Ailuropoda melanoleuca]
Length = 592
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L +DGI ++N + IL +A ++ +Y L+ +V+ +
Sbjct: 175 DRVIHLLALKDYKKHELLIRLEKDGITKTEKNSLGEILRQVANLNTQNFSYTLKDYVFKE 234
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP Y++ +K LK
Sbjct: 235 LQKDWPGYNEAEKQSLK 251
>gi|432863306|ref|XP_004070072.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Oryzias
latipes]
Length = 599
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
L++RIIHLLA++PY+KPE+ L R+ +D+ ++M +L + +D +Y L+ +
Sbjct: 196 LKERIIHLLALKPYRKPEVLLWLERERASLKDKAELMPVLEEVGKLNPKDQSYSLKDEFY 255
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
VQ DW Y +++K ++ R L++ +HS
Sbjct: 256 RCVQKDWAGYLEEEKQLIH-RLLIRKLQPSHS 286
>gi|426258254|ref|XP_004022730.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Ovis
aries]
Length = 602
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVWND 61
+R+IHLLA++ YKK EL L RDG+ D++ + +L +A +D +Y L+ V+ +
Sbjct: 222 ERVIHLLALKDYKKHELLVRLQRDGMTAEDKDSLGKLLQEVAHLNTQDRSYSLKNCVFKE 281
Query: 62 VQDDWPFYSQQDKNMLK 78
+Q DWP Y++ D+ L+
Sbjct: 282 LQRDWPGYNELDRQALE 298
>gi|47229929|emb|CAG10343.1| unnamed protein product [Tetraodon nigroviridis]
Length = 574
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++R+IHLL +RPY++ EL L +DG+ DRD + + ++L + +R + + L+ ++
Sbjct: 207 LKERLIHLLVLRPYRRSELLLRLQKDGLTDRDGDGLDSVLKEVGDLSRGDAFVLKSGLFA 266
Query: 61 DVQDDWPFYSQQDKNMLK 78
+VQ DWP Y+ + +LK
Sbjct: 267 EVQKDWPGYTAGELQLLK 284
>gi|440904318|gb|ELR54846.1| RNA polymerase II elongation factor ELL2, partial [Bos grunniens
mutus]
Length = 601
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVWND 61
DR+IHLLA++ YKK EL L RDG+ + + + + IL +A ++ +Y L+ V+ +
Sbjct: 216 DRVIHLLALKDYKKHELLVRLQRDGMTEEEMDSLGKILQEVAHLNTQNRSYSLKNCVFKE 275
Query: 62 VQDDWPFYSQQDKNMLK 78
+ DWP YS+ D+ L+
Sbjct: 276 LHKDWPGYSEVDRQTLE 292
>gi|47224180|emb|CAG13100.1| unnamed protein product [Tetraodon nigroviridis]
Length = 534
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF-ARDN---TYHLQRH 57
L+DRI+HLLA++PY+KPEL L R+ +D+ + ++L+ + +D +Y L+
Sbjct: 131 LRDRIVHLLALKPYRKPELLLWLERERAAPKDKADLTSVLDEVRLWTKDQVKYSYALKDE 190
Query: 58 VWNDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
+ VQ DWP Y +++K + R L++ ++HS
Sbjct: 191 FYRHVQRDWPGYLEEEKQFVH-RLLIRKLQQHHS 223
>gi|196013091|ref|XP_002116407.1| hypothetical protein TRIADDRAFT_60487 [Trichoplax adhaerens]
gi|190580998|gb|EDV21077.1| hypothetical protein TRIADDRAFT_60487 [Trichoplax adhaerens]
Length = 415
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDG-IRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
+DR+IH LA++P K EL L +DG +D N++ +IL +A ++N ++L +H++++
Sbjct: 190 KDRVIHYLAIQPLNKLELLTRLHKDGRANKKDTNRLGSILKEVAVMKNNKFYLHKHLYSE 249
Query: 62 VQ-DDWPFYSQQDKNML 77
VQ D + Y++ DK ++
Sbjct: 250 VQVDKFSSYTENDKRLV 266
>gi|291408560|ref|XP_002720578.1| PREDICTED: elongation factor RNA polymerase II-like [Oryctolagus
cuniculus]
Length = 595
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDN--TYHLQRHVW 59
+DR+IHLLA+R YKK EL L +D + DR+ + IL +A + +Y L V+
Sbjct: 171 FRDRVIHLLALRDYKKSELLIRLQKDSTQINDRDSLEKILQEVAHLNTSNLSYTLNDDVF 230
Query: 60 NDVQDDWPFYSQQDKNMLKSRELLQNFSENHS 91
++Q DWP Y+ D+ L EL+ + E+ S
Sbjct: 231 KEIQKDWPGYNDIDRQSL---ELVLSLKEDPS 259
>gi|193883668|gb|ACF28314.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883670|gb|ACF28315.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883672|gb|ACF28316.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883674|gb|ACF28317.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883676|gb|ACF28318.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883678|gb|ACF28319.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883680|gb|ACF28320.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883682|gb|ACF28321.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883684|gb|ACF28322.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883686|gb|ACF28323.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883688|gb|ACF28324.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883690|gb|ACF28325.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883692|gb|ACF28326.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
gi|193883696|gb|ACF28328.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
Length = 194
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAIL 41
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL
Sbjct: 148 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNIL 187
>gi|193883694|gb|ACF28327.1| hypothetical protein CG32217, partial [Drosophila melanogaster]
Length = 194
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAIL 41
+++R+IHLLA++ +KKPEL+A L +GIRDR+RNQ+ IL
Sbjct: 148 IRERLIHLLALKAFKKPELFARLKNEGIRDRERNQITNIL 187
>gi|189531659|ref|XP_694180.3| PREDICTED: hypothetical protein LOC565819 [Danio rerio]
Length = 593
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAF--ARDNTYHLQRHVW 59
L++R+IH+LA++PY KPEL L R+ +D+ + +L+ +A +++++ L+ +
Sbjct: 198 LRERVIHILALKPYSKPELLLWLEREKASPKDKADLSPVLDEVAKLNPKEHSFTLKDDFY 257
Query: 60 NDVQDDWPFYSQQDKNMLK 78
V+ DWP Y ++++ +++
Sbjct: 258 RHVRKDWPGYVEEERQLIQ 276
>gi|395839212|ref|XP_003792491.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like [Otolemur garnettii]
Length = 523
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRH-VWN 60
D +IHLLA++ Y+KPE+ L +DG D+N + IL+ + + D +Y L H V+
Sbjct: 195 DTVIHLLALKDYRKPEVLLLLQKDGTXKSDKNSIGKILHQVVNWNSXDFSYTLNXHYVFX 254
Query: 61 DVQDDWPFYSQQDKNMLK 78
++Q DWP ++ D L+
Sbjct: 255 ELQRDWPGXNEADMKXLE 272
>gi|301605344|ref|XP_002932307.1| PREDICTED: RNA polymerase II elongation factor ELL2-like [Xenopus
(Silurana) tropicalis]
Length = 608
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILN--GIAFARDNTYHLQRHVW 59
LQ+ ++HLLA++PYKK ++ A L + G R++ +++A L+ G +D +Y L+ +
Sbjct: 207 LQEWVVHLLALKPYKKQDIIARLEKAGENLREQKELLATLDLVGQLNPKDGSYSLKEEFY 266
Query: 60 NDVQDDWPFYSQQDKNMLKS 79
VQ DW YS +++ ++S
Sbjct: 267 IQVQTDWVGYSPEERQHIES 286
>gi|444512766|gb|ELV10162.1| RNA polymerase II elongation factor ELL2 [Tupaia chinensis]
Length = 538
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 4 DRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAIL 41
DR+IHLLA++ YKKPEL A L +DG+ +D+N + AIL
Sbjct: 176 DRVIHLLALKAYKKPELLARLQKDGVNQKDKNSLGAIL 213
>gi|339234541|ref|XP_003378825.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
gi|316978578|gb|EFV61552.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
Length = 1326
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDN----------- 50
+++RIIH L +RP + L ++G+ D DR Q A N +A R
Sbjct: 224 VRERIIHHLIIRPSTASGMLNRLLKEGLSDVDRQQFEATFNSVAQVRGGKSQSSTAGSGC 283
Query: 51 TYHLQRHVWNDVQDDWPFYSQQDKNMLKSREL 82
Y LQ +++V DWPFY+ ++ +++ REL
Sbjct: 284 VYDLQPQCFSEVSCDWPFYTNYERQLVR-REL 314
>gi|312384109|gb|EFR28916.1| hypothetical protein AND_02552 [Anopheles darlingi]
Length = 179
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 40 ILNGIAFARDNTYHLQRHVWNDVQDDWPFYSQQDKNMLKSR 80
IL I+ RD L R++WN+VQDDWPFYS+QD+ +K R
Sbjct: 7 ILRNISTTRDGMLILHRNIWNEVQDDWPFYSEQDRQAVKRR 47
>gi|358253250|dbj|GAA52662.1| RNA polymerase II elongation factor ELL, partial [Clonorchis
sinensis]
Length = 794
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA-FARDNTYHLQRHVWN 60
L++R+IH+LA+RPY + EL L RDG+ ++Q+ +L + R + Y L V
Sbjct: 159 LRERVIHILALRPYGRAELLLRLQRDGLSQVQKDQLDGLLTKVGRVCRGSAYALSPSVVG 218
Query: 61 DVQDDWPFYSQQDKNMLKS 79
++ WP Y+ +++ + S
Sbjct: 219 ELDPQWPGYTATERSRILS 237
>gi|444726624|gb|ELW67148.1| RNA polymerase II elongation factor ELL [Tupaia chinensis]
Length = 589
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 46/123 (37%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAIL-------------------- 41
+DR++HLLA+RPY+K EL L +DG+ D++ + +L
Sbjct: 246 FRDRVLHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQDWVLGQERATLYPSVCPS 305
Query: 42 -------------------NGIAF-------ARDNTYHLQRHVWNDVQDDWPFYSQQDKN 75
+G A A+D T L+ ++ DVQ DWP YS+ D+
Sbjct: 306 WSASRCVSTLSPVAVAAPGDGHALLQVACVSAKDGTCSLRDCMYKDVQRDWPGYSEGDQQ 365
Query: 76 MLK 78
+LK
Sbjct: 366 LLK 368
>gi|449681147|ref|XP_002154891.2| PREDICTED: RNA polymerase II elongation factor ELL-like [Hydra
magnipapillata]
Length = 434
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 3 QDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWNDV 62
++R+IH+LA++P KKPEL L ++ + +DRN + +L ++ D+ L ++++V
Sbjct: 260 RERVIHVLAIKPLKKPELMTRLQKEAMSQKDRNNLPMVLKQVSTLLDSELKLIPALYSEV 319
Query: 63 Q 63
+
Sbjct: 320 R 320
>gi|198430405|ref|XP_002128540.1| PREDICTED: similar to elongation factor RNA polymerase II [Ciona
intestinalis]
Length = 679
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARD-----NTYHLQR 56
L +R+ H LA+RP K EL L+RD + D ++ IL +A +R + L +
Sbjct: 238 LSERVTHYLALRPLKFQELMIRLSRDQGQP-DAAKLRGILQQVAASRTVGMGVQEFVLNK 296
Query: 57 HVWNDVQDDWPFYSQQDKNMLKSR--ELLQNFSEN 89
+ N+V DWP Y+++++ ++ + E SEN
Sbjct: 297 QLLNEVHADWPGYTEEERVQVRRKLAEFTIKSSEN 331
>gi|47204630|emb|CAF94514.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGI 44
L+DRI+HLLA++PY+KPEL L R+ +D+ + ++L+ +
Sbjct: 131 LRDRIVHLLALKPYRKPELLLWLERERAAPKDKADLTSVLDEV 173
>gi|390339057|ref|XP_791824.2| PREDICTED: uncharacterized protein LOC586975 [Strongylocentrotus
purpuratus]
Length = 411
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 46 FARDNTYHLQRHVWNDVQDDWPFYSQQDKNMLKSRE 81
ARDN+Y L ++++N+V DWP Y+ DK +LK ++
Sbjct: 7 LARDNSYVLNKNLYNEVTLDWPAYTDIDKQLLKRKK 42
>gi|241176299|ref|XP_002399526.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495153|gb|EEC04794.1| conserved hypothetical protein [Ixodes scapularis]
Length = 299
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 56 RHVWNDVQDDWPFYSQQDKNMLK 78
RH WN V DDWPFY+ +++ +LK
Sbjct: 166 RHAWNQVCDDWPFYTPEEQELLK 188
>gi|395754543|ref|XP_003779798.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II elongation factor
ELL2-like, partial [Pongo abelii]
Length = 491
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 5 RIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIA--FARDNTYHLQRHVWNDV 62
R+IH L ++ Y KPEL ++ +D ++ R + I+ +A ++ Y L+ +V+ ++
Sbjct: 159 RVIHFLELKDYXKPELLVSVQKDSLQKITRTPLEKIMYQVANLNTKNIXYVLKNYVFKEL 218
Query: 63 QDDWP 67
Q D P
Sbjct: 219 QRDXP 223
>gi|355685830|gb|AER97863.1| elongation factor RNA polymerase II [Mustela putorius furo]
Length = 237
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGI 29
+DR++HLLA+RPY+K EL L +DG+
Sbjct: 207 FRDRVLHLLALRPYRKAELLLRLQKDGL 234
>gi|426230280|ref|XP_004009204.1| PREDICTED: RNA polymerase II elongation factor ELL [Ovis aries]
Length = 417
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 33 DRNQMMAILNGIAF--ARDNTYHLQRHVWNDVQDDWPFYSQQDKNMLKSRELLQNFSENH 90
D++ + +L +A A+D T L+ V+ DVQ DWP YS+ D+ +LK R L++ +
Sbjct: 38 DKDALDGLLQQVANVNAKDGTCTLKDCVYKDVQKDWPGYSEGDQQLLK-RMLIRKLCQPQ 96
Query: 91 S 91
S
Sbjct: 97 S 97
>gi|440797117|gb|ELR18212.1| hypothetical protein ACA1_369550 [Acanthamoeba castellanii str.
Neff]
Length = 579
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 2 LQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARDNTYHLQRHVWND 61
L+ +I+ LLA+ ++ A + + + + L +A +D YHL++ ++ +
Sbjct: 199 LRTQIVQLLALEALPHEQIEAKCS-----TASKTALASTLQQVAKMKDGLYHLKKEMYRE 253
Query: 62 VQDDWPFYSQQDKNMLKSRELL 83
V +WP ++ +DK + R+ L
Sbjct: 254 VDTNWPSFTPEDKAKVLERKAL 275
>gi|330798750|ref|XP_003287413.1| hypothetical protein DICPUDRAFT_78270 [Dictyostelium purpureum]
gi|325082560|gb|EGC36038.1| hypothetical protein DICPUDRAFT_78270 [Dictyostelium purpureum]
Length = 1003
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 1 MLQDRIIHLLAVRPYKKPELYAALTRDGIRDRDRNQMMAILNGIAFARD-NTYHLQRHVW 59
+++ I+HLLA++PY +L + + + I D++ + IL I++ D N Y +
Sbjct: 544 IIESEILHLLALKPYTLQDLKSKV-QHIITDQNESSFQRILETISYKDDSNHYIINNDKL 602
Query: 60 NDVQDDWPFYSQQDKNMLKSREL 82
N + + W + ++ +K L+ R+L
Sbjct: 603 NMINESW-YKTESEKKELRKRKL 624
>gi|373471096|ref|ZP_09562168.1| glycosyl hydrolase family 2, sugar binding domain protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371761019|gb|EHO49668.1| glycosyl hydrolase family 2, sugar binding domain protein
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 772
Score = 34.7 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 57 HVWNDVQDDWPFYSQQDKNMLKSRELLQNFSENHSITPFYSQQDK 101
H+WN V+D PF + +++ E+L N NH I +Y DK
Sbjct: 247 HLWNGVED--PFLYKLSVKLVRHNEVLDNVEVNHGIREYYVDPDK 289
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,622,468,477
Number of Sequences: 23463169
Number of extensions: 58302354
Number of successful extensions: 132688
Number of sequences better than 100.0: 217
Number of HSP's better than 100.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 132277
Number of HSP's gapped (non-prelim): 263
length of query: 106
length of database: 8,064,228,071
effective HSP length: 74
effective length of query: 32
effective length of database: 6,327,953,565
effective search space: 202494514080
effective search space used: 202494514080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 69 (31.2 bits)