Query psy10147
Match_columns 179
No_of_seqs 181 out of 1200
Neff 10.8
Searched_HMMs 46136
Date Fri Aug 16 19:03:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10147.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10147hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532|consensus 99.9 1.5E-21 3.2E-26 149.4 13.6 174 1-178 217-400 (466)
2 COG2271 UhpC Sugar phosphate p 99.7 5E-17 1.1E-21 120.3 11.5 138 35-178 245-389 (448)
3 TIGR00894 2A0114euk Na(+)-depe 99.7 4.1E-16 8.9E-21 120.5 15.6 147 32-178 251-403 (465)
4 PRK09556 uhpT sugar phosphate 99.6 1.7E-14 3.8E-19 111.6 14.4 135 37-178 253-392 (467)
5 TIGR00886 2A0108 nitrite extru 99.5 1.6E-13 3.6E-18 102.6 12.6 138 34-178 217-360 (366)
6 TIGR00893 2A0114 d-galactonate 99.5 1.1E-12 2.5E-17 98.4 15.7 145 32-178 205-354 (399)
7 PLN00028 nitrate transmembrane 99.5 5.7E-13 1.2E-17 103.4 13.4 143 34-178 244-390 (476)
8 COG2223 NarK Nitrate/nitrite t 99.5 3.6E-13 7.9E-18 100.0 11.5 137 33-178 209-356 (417)
9 PRK10406 alpha-ketoglutarate t 99.5 8.8E-13 1.9E-17 101.2 14.0 138 33-178 233-379 (432)
10 TIGR00881 2A0104 phosphoglycer 99.5 4.3E-12 9.2E-17 95.0 15.7 139 34-178 208-353 (379)
11 TIGR00903 2A0129 major facilit 99.4 1.7E-12 3.7E-17 97.7 11.8 135 34-178 184-323 (368)
12 PRK11273 glpT sn-glycerol-3-ph 99.4 9.1E-12 2E-16 96.1 14.7 70 37-106 248-318 (452)
13 PRK11663 regulatory protein Uh 99.4 1.6E-11 3.4E-16 94.4 15.6 69 38-106 239-308 (434)
14 TIGR00897 2A0118 polyol permea 99.4 1.3E-11 2.9E-16 93.8 15.0 136 34-178 214-357 (402)
15 PRK10133 L-fucose transporter; 99.4 3.2E-11 6.8E-16 92.8 14.5 136 33-177 249-388 (438)
16 TIGR00712 glpT glycerol-3-phos 99.3 5E-11 1.1E-15 91.7 14.0 71 37-107 246-317 (438)
17 TIGR02332 HpaX 4-hydroxyphenyl 99.3 3.5E-11 7.6E-16 91.9 13.0 135 35-178 236-376 (412)
18 TIGR00900 2A0121 H+ Antiporter 99.3 6.6E-11 1.4E-15 88.2 13.9 137 33-178 201-344 (365)
19 TIGR00883 2A0106 metabolite-pr 99.3 3.1E-11 6.7E-16 90.8 11.6 136 32-175 207-352 (394)
20 TIGR00901 2A0125 AmpG-related 99.3 9.3E-11 2E-15 87.7 12.6 135 34-178 198-352 (356)
21 KOG2533|consensus 99.3 2.3E-11 4.9E-16 94.2 9.4 76 30-105 261-337 (495)
22 TIGR00899 2A0120 sugar efflux 99.3 2.1E-10 4.4E-15 86.2 14.4 135 35-178 192-330 (375)
23 KOG4686|consensus 99.3 4.2E-11 9E-16 85.4 9.7 128 41-177 263-394 (459)
24 PF07690 MFS_1: Major Facilita 99.3 2.2E-11 4.9E-16 90.4 8.6 137 35-178 199-342 (352)
25 TIGR01272 gluP glucose/galacto 99.3 6.1E-10 1.3E-14 82.0 16.0 131 37-176 135-270 (310)
26 PRK03545 putative arabinose tr 99.3 2.7E-10 5.8E-15 86.3 14.5 136 34-178 197-336 (390)
27 TIGR00902 2A0127 phenyl propri 99.3 5.3E-10 1.1E-14 84.6 16.0 133 34-177 197-334 (382)
28 PRK10054 putative transporter; 99.3 1.9E-10 4.1E-15 87.4 13.1 127 42-177 7-138 (395)
29 PRK09952 shikimate transporter 99.3 3.6E-10 7.8E-15 87.0 14.7 131 37-176 244-384 (438)
30 TIGR00896 CynX cyanate transpo 99.2 4.6E-10 1E-14 84.0 14.4 72 35-107 190-262 (355)
31 PRK10642 proline/glycine betai 99.2 6.2E-10 1.3E-14 86.9 15.6 136 32-176 238-383 (490)
32 TIGR00890 2A0111 Oxalate/Forma 99.2 4.3E-10 9.3E-15 84.1 13.9 135 34-178 197-338 (377)
33 PRK15034 nitrate/nitrite trans 99.2 2.5E-10 5.3E-15 87.8 12.5 73 33-107 243-316 (462)
34 PRK11102 bicyclomycin/multidru 99.2 4.3E-10 9.4E-15 84.6 13.7 74 34-107 186-260 (377)
35 TIGR00710 efflux_Bcr_CflA drug 99.2 2.5E-10 5.4E-15 86.0 12.3 136 34-178 198-342 (385)
36 PRK14995 methyl viologen resis 99.2 3.6E-10 7.7E-15 88.3 13.1 133 37-178 254-394 (495)
37 PRK03699 putative transporter; 99.2 9.8E-10 2.1E-14 83.4 14.4 67 41-107 204-271 (394)
38 PRK15075 citrate-proton sympor 99.2 1E-09 2.3E-14 84.3 14.4 134 35-176 230-372 (434)
39 TIGR00711 efflux_EmrB drug res 99.2 7.9E-10 1.7E-14 85.9 13.7 133 37-178 250-391 (485)
40 TIGR00886 2A0108 nitrite extru 99.2 5.9E-10 1.3E-14 83.4 12.6 126 43-177 2-132 (366)
41 PRK09705 cynX putative cyanate 99.2 1.1E-09 2.4E-14 83.2 13.8 70 37-107 200-270 (393)
42 PRK11128 putative 3-phenylprop 99.2 3E-09 6.4E-14 80.5 16.0 135 33-177 196-334 (382)
43 TIGR00895 2A0115 benzoate tran 99.2 1.2E-09 2.6E-14 82.4 13.8 127 42-178 250-381 (398)
44 PRK11010 ampG muropeptide tran 99.2 1E-09 2.3E-14 85.6 13.3 138 33-178 213-359 (491)
45 PRK15011 sugar efflux transpor 99.2 1.9E-09 4.1E-14 81.8 14.3 119 50-177 224-346 (393)
46 PRK11551 putative 3-hydroxyphe 99.2 2.1E-09 4.6E-14 81.7 14.2 126 43-178 221-351 (406)
47 COG2814 AraJ Arabinose efflux 99.1 1.9E-09 4.1E-14 80.8 13.1 131 35-177 204-341 (394)
48 PRK10489 enterobactin exporter 99.1 1.6E-09 3.5E-14 82.8 13.1 135 34-178 216-355 (417)
49 PRK11043 putative transporter; 99.1 1.7E-09 3.7E-14 82.2 12.8 139 33-178 194-338 (401)
50 PRK15402 multidrug efflux syst 99.1 2.5E-09 5.5E-14 81.4 13.7 75 33-107 206-281 (406)
51 TIGR00892 2A0113 monocarboxyla 99.1 1.8E-09 3.9E-14 83.6 12.9 136 37-178 236-376 (455)
52 TIGR00891 2A0112 putative sial 99.1 1.8E-09 3.9E-14 81.7 12.3 122 48-178 244-371 (405)
53 PRK09584 tppB putative tripept 99.1 3.1E-09 6.6E-14 83.2 13.3 122 37-167 15-143 (500)
54 PRK12307 putative sialic acid 99.1 3.1E-09 6.7E-14 81.3 12.7 135 34-178 220-364 (426)
55 PRK11646 multidrug resistance 99.1 3.7E-09 8.1E-14 80.5 13.0 124 45-177 13-141 (400)
56 PRK15462 dipeptide/tripeptide 99.1 2.3E-09 4.9E-14 83.3 11.4 126 42-176 9-143 (493)
57 PRK15034 nitrate/nitrite trans 99.1 1.4E-08 3E-13 78.3 15.3 128 40-176 32-168 (462)
58 PLN00028 nitrate transmembrane 99.1 1.1E-08 2.4E-13 79.6 14.8 121 47-177 41-165 (476)
59 TIGR00924 yjdL_sub1_fam amino 99.1 2.5E-09 5.3E-14 83.3 10.9 124 43-175 11-145 (475)
60 PRK10504 putative transporter; 99.0 8.5E-09 1.8E-13 80.0 13.5 133 37-178 256-396 (471)
61 PRK11652 emrD multidrug resist 99.0 1.6E-08 3.4E-13 76.8 14.2 138 33-178 198-341 (394)
62 PRK11663 regulatory protein Uh 99.0 5.3E-09 1.2E-13 80.5 11.6 125 44-178 25-154 (434)
63 PRK10504 putative transporter; 99.0 1.5E-08 3.3E-13 78.6 14.1 126 42-177 10-140 (471)
64 TIGR01299 synapt_SV2 synaptic 99.0 1.6E-08 3.5E-13 82.1 14.3 85 85-178 603-691 (742)
65 PRK10213 nepI ribonucleoside t 99.0 3.5E-08 7.7E-13 75.0 15.4 71 34-104 208-279 (394)
66 TIGR00792 gph sugar (Glycoside 99.0 5.4E-09 1.2E-13 80.2 10.9 135 34-178 214-361 (437)
67 PRK03633 putative MFS family t 99.0 2.7E-08 5.8E-13 75.3 14.3 127 41-177 5-136 (381)
68 TIGR02718 sider_RhtX_FptX side 99.0 2.8E-08 6.1E-13 75.3 14.3 73 34-107 200-274 (390)
69 PRK10473 multidrug efflux syst 99.0 3.2E-08 6.8E-13 75.1 14.3 74 34-107 195-269 (392)
70 PRK08633 2-acyl-glycerophospho 99.0 5E-09 1.1E-13 89.2 10.9 136 34-178 224-365 (1146)
71 TIGR00887 2A0109 phosphate:H+ 99.0 1.8E-08 4E-13 78.9 13.0 136 33-178 272-435 (502)
72 PRK09528 lacY galactoside perm 99.0 1.1E-08 2.3E-13 78.4 11.2 71 37-107 5-76 (420)
73 TIGR01299 synapt_SV2 synaptic 99.0 3.2E-08 7E-13 80.4 14.3 107 61-177 186-297 (742)
74 TIGR00885 fucP L-fucose:H+ sym 99.0 8.5E-08 1.8E-12 73.4 15.7 129 34-171 224-356 (410)
75 TIGR00891 2A0112 putative sial 99.0 4.4E-08 9.6E-13 74.1 14.1 125 44-178 14-143 (405)
76 TIGR02332 HpaX 4-hydroxyphenyl 99.0 3.3E-08 7.1E-13 75.6 13.4 125 44-178 10-139 (412)
77 cd06174 MFS The Major Facilita 99.0 4.5E-08 9.7E-13 72.4 13.8 129 42-178 175-308 (352)
78 PRK09874 drug efflux system pr 98.9 6.8E-08 1.5E-12 73.4 14.9 125 43-177 15-148 (408)
79 COG2807 CynX Cyanate permease 98.9 3.7E-08 7.9E-13 72.6 12.6 71 36-107 202-273 (395)
80 PRK12382 putative transporter; 98.9 2E-08 4.4E-13 76.1 11.7 66 42-107 15-81 (392)
81 PRK03699 putative transporter; 98.9 5.9E-08 1.3E-12 73.8 14.2 123 44-176 9-136 (394)
82 PRK09528 lacY galactoside perm 98.9 6E-09 1.3E-13 79.8 8.8 130 34-172 215-352 (420)
83 PRK09848 glucuronide transport 98.9 1.1E-08 2.5E-13 78.9 10.3 136 34-178 220-369 (448)
84 PRK03633 putative MFS family t 98.9 9.9E-08 2.1E-12 72.2 15.0 73 34-107 192-265 (381)
85 PRK06814 acylglycerophosphoeth 98.9 4.2E-09 9.1E-14 89.8 8.3 73 34-106 217-290 (1140)
86 PF13347 MFS_2: MFS/sugar tran 98.9 2.6E-08 5.6E-13 76.5 11.5 138 32-178 215-365 (428)
87 PF07690 MFS_1: Major Facilita 98.9 6E-08 1.3E-12 72.0 13.0 122 48-178 2-128 (352)
88 TIGR00805 oat sodium-independe 98.9 5E-09 1.1E-13 84.1 7.6 74 34-107 322-397 (633)
89 PRK11195 lysophospholipid tran 98.9 2.6E-08 5.6E-13 75.8 11.0 134 35-178 198-337 (393)
90 PRK12307 putative sialic acid 98.9 7.5E-08 1.6E-12 73.7 13.5 124 44-177 20-148 (426)
91 PF11700 ATG22: Vacuole efflux 98.9 7.1E-08 1.5E-12 75.0 13.0 137 34-177 273-422 (477)
92 PRK10213 nepI ribonucleoside t 98.9 1.3E-07 2.8E-12 72.0 14.2 122 46-177 24-150 (394)
93 TIGR00889 2A0110 nucleoside tr 98.9 1.1E-07 2.3E-12 73.0 13.7 133 35-177 201-350 (418)
94 PRK05122 major facilitator sup 98.9 3E-08 6.5E-13 75.3 10.6 67 41-107 14-81 (399)
95 COG0738 FucP Fucose permease [ 98.9 1.5E-07 3.3E-12 70.3 13.5 131 34-173 228-361 (422)
96 PRK11902 ampG muropeptide tran 98.9 1.2E-07 2.6E-12 72.3 13.4 75 33-107 200-276 (402)
97 PF05977 MFS_3: Transmembrane 98.9 6.2E-08 1.4E-12 76.1 11.9 136 34-178 210-350 (524)
98 PRK10091 MFS transport protein 98.9 1.2E-07 2.7E-12 71.7 13.2 71 37-107 194-265 (382)
99 PRK15403 multidrug efflux syst 98.8 7E-08 1.5E-12 73.9 12.0 69 33-101 209-278 (413)
100 TIGR00882 2A0105 oligosacchari 98.8 8.7E-08 1.9E-12 72.8 12.4 67 41-107 1-68 (396)
101 TIGR00900 2A0121 H+ Antiporter 98.8 6.4E-08 1.4E-12 72.1 11.5 121 47-177 4-134 (365)
102 PRK11646 multidrug resistance 98.8 1.7E-07 3.6E-12 71.5 13.8 135 34-178 200-340 (400)
103 PRK10489 enterobactin exporter 98.8 4.4E-08 9.5E-13 74.9 10.6 135 33-177 8-152 (417)
104 PRK10207 dipeptide/tripeptide 98.8 5.5E-08 1.2E-12 76.0 11.3 117 42-167 14-136 (489)
105 TIGR00882 2A0105 oligosacchari 98.8 6.8E-08 1.5E-12 73.4 11.6 74 34-107 207-284 (396)
106 TIGR00895 2A0115 benzoate tran 98.8 1E-07 2.3E-12 71.8 12.5 122 47-178 22-148 (398)
107 TIGR00890 2A0111 Oxalate/Forma 98.8 2.6E-08 5.7E-13 74.5 9.1 116 52-177 13-132 (377)
108 TIGR00712 glpT glycerol-3-phos 98.8 3.1E-08 6.7E-13 76.3 9.5 128 40-178 25-161 (438)
109 PRK03545 putative arabinose tr 98.8 7.6E-08 1.6E-12 73.0 11.5 124 44-177 11-139 (390)
110 PRK10091 MFS transport protein 98.8 1.1E-07 2.3E-12 72.0 12.2 125 42-176 3-132 (382)
111 PRK11273 glpT sn-glycerol-3-ph 98.8 1.2E-07 2.7E-12 73.3 12.8 106 61-177 48-162 (452)
112 PRK03893 putative sialic acid 98.8 5.8E-08 1.2E-12 75.8 10.9 110 60-178 293-409 (496)
113 PRK03893 putative sialic acid 98.8 2.9E-07 6.3E-12 71.9 14.4 124 44-177 22-150 (496)
114 TIGR00710 efflux_Bcr_CflA drug 98.8 8.9E-08 1.9E-12 72.1 11.2 121 47-177 10-135 (385)
115 PRK11551 putative 3-hydroxyphe 98.8 2.1E-07 4.5E-12 70.9 13.2 124 44-177 17-145 (406)
116 TIGR00897 2A0118 polyol permea 98.8 1.9E-07 4.2E-12 71.1 12.7 126 42-177 13-147 (402)
117 TIGR00711 efflux_EmrB drug res 98.8 3.8E-07 8.2E-12 71.0 14.3 122 46-177 6-132 (485)
118 PRK05122 major facilitator sup 98.8 1.1E-06 2.3E-11 66.9 16.3 116 51-178 225-345 (399)
119 TIGR00899 2A0120 sugar efflux 98.8 1.2E-07 2.6E-12 71.2 10.9 59 49-107 4-63 (375)
120 PRK11043 putative transporter; 98.8 2.5E-07 5.4E-12 70.4 12.7 113 54-175 15-134 (401)
121 COG2223 NarK Nitrate/nitrite t 98.8 7.8E-08 1.7E-12 72.0 9.4 126 42-177 14-146 (417)
122 TIGR00881 2A0104 phosphoglycer 98.8 1.7E-08 3.7E-13 75.5 6.1 117 51-177 4-125 (379)
123 PRK10473 multidrug efflux syst 98.8 3.4E-07 7.3E-12 69.5 13.0 124 44-177 5-133 (392)
124 cd06174 MFS The Major Facilita 98.7 1.1E-07 2.4E-12 70.3 9.8 122 46-177 3-129 (352)
125 KOG2504|consensus 98.7 3.5E-07 7.5E-12 71.7 12.9 133 36-176 292-429 (509)
126 PRK11195 lysophospholipid tran 98.7 2.9E-07 6.3E-12 70.1 11.5 125 42-178 3-131 (393)
127 COG2814 AraJ Arabinose efflux 98.7 5.2E-07 1.1E-11 67.9 12.5 127 42-178 13-144 (394)
128 PRK09705 cynX putative cyanate 98.7 2.5E-07 5.5E-12 70.3 11.0 110 58-177 25-138 (393)
129 TIGR00893 2A0114 d-galactonate 98.7 1.4E-07 3E-12 70.8 9.3 111 58-178 10-125 (399)
130 TIGR00903 2A0129 major facilit 98.7 3.4E-07 7.3E-12 69.2 11.3 114 54-177 3-120 (368)
131 PRK10133 L-fucose transporter; 98.7 1.4E-06 3.1E-11 67.3 14.3 122 44-175 28-157 (438)
132 PF12832 MFS_1_like: MFS_1 lik 98.7 2E-07 4.2E-12 54.2 7.3 60 47-107 5-65 (77)
133 KOG1330|consensus 98.7 1.6E-07 3.6E-12 71.2 8.5 125 44-178 35-164 (493)
134 PRK11652 emrD multidrug resist 98.7 7.3E-07 1.6E-11 67.7 12.3 122 45-176 11-137 (394)
135 TIGR00879 SP MFS transporter, 98.7 6.9E-07 1.5E-11 68.9 12.3 125 44-178 286-426 (481)
136 TIGR00806 rfc RFC reduced fola 98.7 1.5E-06 3.2E-11 67.0 13.6 110 60-178 43-157 (511)
137 PTZ00207 hypothetical protein; 98.7 1.5E-06 3.2E-11 69.2 13.9 115 53-178 38-162 (591)
138 TIGR00885 fucP L-fucose:H+ sym 98.6 1.6E-06 3.6E-11 66.4 13.4 124 44-177 5-136 (410)
139 TIGR00892 2A0113 monocarboxyla 98.6 1.5E-06 3.2E-11 67.5 13.2 110 59-178 36-150 (455)
140 TIGR00898 2A0119 cation transp 98.6 8.8E-07 1.9E-11 69.4 11.9 134 33-178 314-453 (505)
141 COG2271 UhpC Sugar phosphate p 98.6 1.7E-07 3.6E-12 70.5 7.2 124 44-177 31-159 (448)
142 PRK15402 multidrug efflux syst 98.6 1.5E-06 3.3E-11 66.2 12.7 108 59-176 30-142 (406)
143 PRK09556 uhpT sugar phosphate 98.6 2.8E-07 6.2E-12 71.6 8.8 107 61-177 48-164 (467)
144 PRK12382 putative transporter; 98.6 3.7E-06 8E-11 63.8 14.3 114 53-178 227-345 (392)
145 PRK15011 sugar efflux transpor 98.6 2.2E-06 4.7E-11 65.2 12.8 66 41-107 14-81 (393)
146 PRK10077 xylE D-xylose transpo 98.5 2.4E-06 5.2E-11 66.5 12.5 111 58-178 287-407 (479)
147 PRK15403 multidrug efflux syst 98.5 1.8E-06 3.8E-11 66.2 11.6 106 62-177 36-146 (413)
148 PRK09669 putative symporter Ya 98.5 1.3E-06 2.8E-11 67.5 10.7 74 33-107 220-294 (444)
149 PRK11102 bicyclomycin/multidru 98.5 1E-06 2.2E-11 66.3 9.9 109 59-177 8-121 (377)
150 PF01306 LacY_symp: LacY proto 98.5 1.1E-06 2.3E-11 66.8 9.8 69 39-107 4-73 (412)
151 PRK09874 drug efflux system pr 98.5 9.8E-07 2.1E-11 67.1 9.8 132 37-177 213-353 (408)
152 PRK11902 ampG muropeptide tran 98.5 2.5E-06 5.3E-11 65.1 11.9 120 47-177 4-136 (402)
153 PRK10429 melibiose:sodium symp 98.5 5.7E-07 1.2E-11 70.1 8.4 127 45-175 9-147 (473)
154 PRK14995 methyl viologen resis 98.5 7.2E-06 1.6E-10 64.3 14.5 123 45-177 9-137 (495)
155 TIGR00792 gph sugar (Glycoside 98.5 1.9E-07 4.2E-12 71.7 5.6 121 52-176 9-141 (437)
156 PRK09669 putative symporter Ya 98.5 3.9E-07 8.4E-12 70.4 7.1 125 46-174 13-149 (444)
157 TIGR00879 SP MFS transporter, 98.5 1.9E-06 4.2E-11 66.4 10.8 92 77-177 70-169 (481)
158 KOG0569|consensus 98.5 6.8E-07 1.5E-11 69.2 8.0 137 31-177 254-410 (485)
159 PRK10429 melibiose:sodium symp 98.5 1.5E-06 3.2E-11 67.8 9.8 73 34-107 223-296 (473)
160 TIGR01301 GPH_sucrose GPH fami 98.5 2.3E-06 5E-11 66.5 10.7 122 46-176 8-157 (477)
161 COG2270 Permeases of the major 98.5 2.2E-06 4.7E-11 64.6 10.0 136 33-177 243-383 (438)
162 PF03825 Nuc_H_symport: Nucleo 98.5 1.4E-05 2.9E-10 61.2 14.6 134 35-177 200-343 (400)
163 PRK08633 2-acyl-glycerophospho 98.5 2.9E-06 6.2E-11 72.7 11.9 133 37-178 4-146 (1146)
164 PF06609 TRI12: Fungal trichot 98.4 6E-06 1.3E-10 65.6 12.4 127 39-176 37-171 (599)
165 COG2211 MelB Na+/melibiose sym 98.4 3E-06 6.4E-11 65.2 10.4 134 35-177 229-376 (467)
166 PRK09848 glucuronide transport 98.4 2E-06 4.3E-11 66.6 9.4 64 45-108 11-75 (448)
167 PRK11462 putative transporter; 98.4 2.8E-06 6.1E-11 66.0 10.0 127 46-176 13-151 (460)
168 PRK10406 alpha-ketoglutarate t 98.4 2.1E-05 4.5E-10 60.7 14.5 118 49-176 29-165 (432)
169 PRK11010 ampG muropeptide tran 98.4 1.2E-05 2.5E-10 63.2 13.3 131 37-177 7-149 (491)
170 KOG3626|consensus 98.4 1.6E-06 3.4E-11 69.8 8.3 72 34-105 384-457 (735)
171 TIGR00896 CynX cyanate transpo 98.4 3.6E-06 7.9E-11 63.0 9.8 106 61-177 19-128 (355)
172 PRK10642 proline/glycine betai 98.4 2E-05 4.3E-10 61.8 14.2 122 46-177 20-160 (490)
173 PF03825 Nuc_H_symport: Nucleo 98.4 1.2E-05 2.5E-10 61.5 12.5 60 47-107 7-67 (400)
174 PRK09952 shikimate transporter 98.4 2.2E-05 4.8E-10 60.7 14.2 123 45-176 25-166 (438)
175 TIGR00889 2A0110 nucleoside tr 98.4 1.1E-05 2.3E-10 62.1 12.1 61 47-107 7-68 (418)
176 COG3104 PTR2 Dipeptide/tripept 98.4 6.3E-06 1.4E-10 63.4 10.6 122 38-167 16-148 (498)
177 PRK06814 acylglycerophosphoeth 98.4 7.3E-06 1.6E-10 70.4 12.3 136 37-178 6-151 (1140)
178 KOG2615|consensus 98.4 1.9E-06 4.1E-11 64.2 7.4 114 56-178 42-163 (451)
179 PRK10077 xylE D-xylose transpo 98.4 7.6E-06 1.6E-10 63.7 11.3 95 74-177 51-162 (479)
180 TIGR00902 2A0127 phenyl propri 98.4 5.6E-06 1.2E-10 62.8 10.1 61 45-106 7-68 (382)
181 KOG0253|consensus 98.4 5.5E-06 1.2E-10 61.8 9.5 135 34-177 315-476 (528)
182 TIGR00887 2A0109 phosphate:H+ 98.3 2.9E-05 6.3E-10 61.1 14.0 93 76-177 54-157 (502)
183 PRK11462 putative transporter; 98.3 2.3E-05 5E-10 61.0 13.3 73 34-107 220-293 (460)
184 PF05977 MFS_3: Transmembrane 98.3 2.1E-05 4.5E-10 62.1 12.6 131 38-177 6-145 (524)
185 PRK15075 citrate-proton sympor 98.3 2.8E-05 6E-10 60.0 13.1 124 44-177 17-159 (434)
186 PF03137 OATP: Organic Anion T 98.3 1.3E-07 2.8E-12 74.6 0.0 74 33-106 296-371 (539)
187 KOG2504|consensus 98.3 7.1E-06 1.5E-10 64.4 9.5 123 45-177 45-176 (509)
188 PRK10054 putative transporter; 98.3 3.5E-06 7.6E-11 64.2 7.7 132 36-176 200-339 (395)
189 KOG1330|consensus 98.3 8.8E-06 1.9E-10 62.1 9.1 143 34-176 236-390 (493)
190 PF01306 LacY_symp: LacY proto 98.2 0.00018 3.9E-09 54.9 15.6 134 34-176 212-353 (412)
191 PRK11128 putative 3-phenylprop 98.2 1.8E-05 3.8E-10 60.0 10.2 56 51-107 13-69 (382)
192 TIGR00898 2A0119 cation transp 98.2 3E-06 6.5E-11 66.4 6.2 104 64-177 111-222 (505)
193 PF06609 TRI12: Fungal trichot 98.2 0.00013 2.7E-09 58.3 14.3 137 33-178 301-448 (599)
194 COG2211 MelB Na+/melibiose sym 98.1 2E-05 4.3E-10 60.8 8.7 126 45-174 15-152 (467)
195 PTZ00207 hypothetical protein; 98.1 0.00015 3.3E-09 57.9 12.8 138 34-172 345-488 (591)
196 TIGR00894 2A0114euk Na(+)-depe 98.1 2.9E-05 6.2E-10 60.4 8.6 98 72-178 70-174 (465)
197 TIGR00901 2A0125 AmpG-related 98.0 6.3E-05 1.4E-09 56.3 9.8 112 61-177 7-125 (356)
198 KOG2563|consensus 98.0 2.2E-05 4.7E-10 59.8 6.9 74 32-106 256-330 (480)
199 KOG0254|consensus 98.0 0.00019 4.2E-09 56.7 12.4 87 82-177 94-184 (513)
200 TIGR00880 2_A_01_02 Multidrug 98.0 5.6E-05 1.2E-09 48.3 7.9 86 84-178 5-94 (141)
201 PF03209 PUCC: PUCC protein; 98.0 0.00045 9.8E-09 52.3 13.1 70 33-102 199-269 (403)
202 KOG3764|consensus 98.0 4.3E-05 9.4E-10 57.5 7.6 107 31-144 259-366 (464)
203 TIGR00805 oat sodium-independe 97.9 3.6E-05 7.7E-10 62.3 6.4 51 57-107 47-98 (633)
204 PF06813 Nodulin-like: Nodulin 97.8 0.00011 2.4E-09 52.5 7.3 113 53-176 13-136 (250)
205 PF13347 MFS_2: MFS/sugar tran 97.8 1.2E-05 2.6E-10 61.9 2.4 121 51-175 10-144 (428)
206 TIGR01301 GPH_sucrose GPH fami 97.7 0.0024 5.3E-08 50.0 14.0 36 42-77 258-294 (477)
207 KOG0569|consensus 97.7 0.00081 1.7E-08 52.5 11.0 108 63-177 39-158 (485)
208 TIGR02718 sider_RhtX_FptX side 97.7 0.0007 1.5E-08 51.5 10.1 63 44-107 3-69 (390)
209 KOG0255|consensus 97.7 0.00015 3.3E-09 57.3 6.7 96 71-175 111-211 (521)
210 PRK10207 dipeptide/tripeptide 97.6 0.0057 1.2E-07 48.2 14.6 138 37-178 262-422 (489)
211 KOG3764|consensus 97.6 0.0003 6.6E-09 53.1 7.1 93 76-177 104-202 (464)
212 PF06963 FPN1: Ferroportin1 (F 97.6 0.0053 1.2E-07 47.5 13.7 72 33-106 250-322 (432)
213 TIGR00788 fbt folate/biopterin 97.6 0.00062 1.4E-08 53.2 8.8 60 44-105 28-88 (468)
214 TIGR00883 2A0106 metabolite-pr 97.6 0.0018 3.9E-08 48.7 11.1 80 89-177 47-138 (394)
215 KOG2615|consensus 97.4 0.0018 3.9E-08 48.8 9.1 121 50-178 269-395 (451)
216 PF06779 DUF1228: Protein of u 97.4 0.0016 3.4E-08 38.4 7.1 76 55-140 5-81 (85)
217 KOG0254|consensus 97.4 0.0016 3.5E-08 51.5 8.9 127 41-177 294-437 (513)
218 COG2807 CynX Cyanate permease 97.3 0.0039 8.4E-08 46.7 9.7 107 61-178 31-141 (395)
219 TIGR00924 yjdL_sub1_fam amino 97.3 0.047 1E-06 43.0 16.2 132 44-177 274-423 (475)
220 PF01770 Folate_carrier: Reduc 97.2 0.015 3.3E-07 44.5 12.0 70 35-104 240-312 (412)
221 PF11700 ATG22: Vacuole efflux 97.1 0.013 2.9E-07 46.0 11.2 77 83-167 76-157 (477)
222 TIGR00788 fbt folate/biopterin 97.0 0.00097 2.1E-08 52.2 3.8 135 35-178 245-394 (468)
223 KOG0252|consensus 96.9 0.0081 1.8E-07 46.6 8.2 31 77-107 83-114 (538)
224 KOG3762|consensus 96.9 0.00051 1.1E-08 53.8 1.9 55 52-107 21-76 (618)
225 COG0738 FucP Fucose permease [ 96.9 0.039 8.5E-07 42.1 11.6 62 63-134 34-96 (422)
226 PF00083 Sugar_tr: Sugar (and 96.8 5.4E-06 1.2E-10 64.0 -9.9 135 33-178 239-392 (451)
227 PF00083 Sugar_tr: Sugar (and 96.7 0.00013 2.9E-09 56.4 -2.4 87 82-177 51-144 (451)
228 KOG0252|consensus 96.5 0.0043 9.3E-08 48.0 4.3 126 42-177 304-448 (538)
229 KOG3762|consensus 96.5 0.009 2E-07 47.1 6.0 131 37-177 366-501 (618)
230 COG2270 Permeases of the major 96.3 0.016 3.4E-07 44.4 6.5 99 61-167 34-146 (438)
231 PF05631 DUF791: Protein of un 96.3 0.19 4.1E-06 37.9 11.6 62 42-107 37-99 (354)
232 KOG2533|consensus 96.2 0.21 4.5E-06 39.7 12.2 98 71-177 74-176 (495)
233 KOG2532|consensus 96.1 0.022 4.9E-07 44.6 6.5 97 72-177 67-170 (466)
234 TIGR00926 2A1704 Peptide:H+ sy 96.0 0.065 1.4E-06 43.9 8.9 51 57-107 2-53 (654)
235 PRK09584 tppB putative tripept 96.0 0.45 9.8E-06 37.8 13.2 119 53-176 283-423 (500)
236 KOG2816|consensus 95.6 0.05 1.1E-06 42.7 6.5 128 41-177 239-372 (463)
237 PF03209 PUCC: PUCC protein; 95.5 0.095 2.1E-06 40.1 7.5 37 68-105 5-42 (403)
238 KOG0255|consensus 95.5 0.6 1.3E-05 37.1 12.5 80 89-177 362-448 (521)
239 KOG2816|consensus 95.4 0.18 4E-06 39.6 9.0 82 87-178 72-155 (463)
240 KOG0637|consensus 95.4 0.043 9.4E-07 42.5 5.3 85 45-134 35-120 (498)
241 KOG2325|consensus 95.3 0.099 2.1E-06 41.1 7.1 114 44-165 36-158 (488)
242 TIGR00806 rfc RFC reduced fola 94.9 0.29 6.3E-06 38.7 8.6 67 37-103 257-324 (511)
243 KOG2563|consensus 94.7 1 2.2E-05 35.2 10.8 40 66-106 68-108 (480)
244 KOG0253|consensus 94.5 0.22 4.7E-06 38.1 6.8 52 56-107 91-143 (528)
245 PF05978 UNC-93: Ion channel r 94.1 1.1 2.4E-05 29.8 13.8 86 80-175 38-129 (156)
246 KOG3810|consensus 93.5 0.14 3.1E-06 38.6 4.2 96 37-142 229-329 (433)
247 COG0477 ProP Permeases of the 93.1 2.2 4.8E-05 30.2 11.1 107 60-176 20-136 (338)
248 KOG3098|consensus 92.6 4.3 9.3E-05 32.1 11.9 71 37-107 235-309 (461)
249 PF07672 MFS_Mycoplasma: Mycop 91.4 1.9 4E-05 31.3 7.5 23 31-53 83-105 (267)
250 PF02990 EMP70: Endomembrane p 91.2 2.4 5.3E-05 34.0 8.9 34 75-108 290-324 (521)
251 COG2962 RarD Predicted permeas 90.9 5 0.00011 29.4 9.6 64 33-104 60-124 (293)
252 PF03092 BT1: BT1 family; Int 90.0 1.5 3.3E-05 34.2 6.7 59 65-131 12-74 (433)
253 PRK15462 dipeptide/tripeptide 89.8 9 0.00019 30.7 15.1 93 82-176 313-418 (493)
254 PF05631 DUF791: Protein of un 89.3 3.6 7.8E-05 31.2 7.8 64 34-100 236-301 (354)
255 KOG1237|consensus 85.3 16 0.00036 29.8 10.0 63 44-106 39-102 (571)
256 PF01770 Folate_carrier: Reduc 84.6 17 0.00037 28.4 9.9 96 62-166 23-123 (412)
257 PF03137 OATP: Organic Anion T 84.1 0.32 6.9E-06 39.1 0.0 57 47-104 8-65 (539)
258 PF06963 FPN1: Ferroportin1 (F 82.2 23 0.00049 27.9 12.0 63 44-106 4-67 (432)
259 KOG1479|consensus 80.9 25 0.00053 27.5 10.6 63 43-107 19-82 (406)
260 KOG3574|consensus 78.3 6 0.00013 30.8 4.9 60 42-107 31-98 (510)
261 KOG4686|consensus 74.3 0.17 3.8E-06 37.3 -3.8 61 43-105 42-107 (459)
262 COG5336 Uncharacterized protei 71.1 22 0.00048 22.0 5.8 19 87-105 52-70 (116)
263 KOG4332|consensus 69.7 2.7 5.9E-05 31.0 1.3 41 68-108 62-103 (454)
264 PF11872 DUF3392: Protein of u 67.8 26 0.00057 21.6 6.0 18 56-73 63-80 (106)
265 PF13940 Ldr_toxin: Toxin Ldr, 67.5 10 0.00022 17.9 2.5 20 83-102 14-33 (35)
266 KOG4332|consensus 67.0 51 0.0011 24.7 9.3 66 36-107 242-308 (454)
267 PF08566 Pam17: Mitochondrial 65.3 40 0.00087 22.9 7.6 15 33-47 25-42 (173)
268 PF03092 BT1: BT1 family; Int 65.1 7.5 0.00016 30.4 3.0 27 151-177 333-360 (433)
269 KOG3098|consensus 64.9 71 0.0015 25.5 12.2 109 56-174 23-141 (461)
270 PF13000 Acatn: Acetyl-coenzym 63.1 82 0.0018 25.7 11.3 66 37-106 273-338 (544)
271 PF11947 DUF3464: Protein of u 62.2 26 0.00056 23.3 4.6 12 164-175 123-134 (153)
272 PF13493 DUF4118: Domain of un 62.1 13 0.00028 22.4 3.2 22 85-106 83-104 (105)
273 PF03219 TLC: TLC ATP/ADP tran 56.3 1.1E+02 0.0023 24.8 11.7 72 33-105 271-347 (491)
274 COG3104 PTR2 Dipeptide/tripept 55.9 1.1E+02 0.0024 24.8 12.7 36 82-117 329-364 (498)
275 PF07857 DUF1632: CEO family ( 55.0 80 0.0017 23.0 6.6 22 52-73 188-209 (254)
276 PRK03612 spermidine synthase; 51.2 1.3E+02 0.0029 24.4 12.7 48 56-103 28-76 (521)
277 KOG3574|consensus 48.9 1.3E+02 0.0028 23.9 7.0 51 35-86 258-308 (510)
278 KOG0637|consensus 46.8 1.5E+02 0.0033 23.9 9.8 65 41-105 278-360 (498)
279 KOG4830|consensus 45.0 28 0.00061 25.8 2.9 57 50-107 25-91 (412)
280 COG1268 BioY Uncharacterized c 44.6 1E+02 0.0022 21.2 5.4 20 87-106 92-111 (184)
281 PF02694 UPF0060: Uncharacteri 44.6 76 0.0016 19.7 7.3 28 78-105 54-82 (107)
282 KOG1726|consensus 42.7 96 0.0021 22.1 5.2 39 34-72 28-66 (225)
283 PRK02237 hypothetical protein; 41.4 56 0.0012 20.3 3.4 26 80-105 58-84 (109)
284 TIGR00769 AAA ADP/ATP carrier 40.9 1.9E+02 0.0041 23.3 11.5 73 33-106 255-332 (472)
285 PF14068 YuiB: Putative membra 40.0 88 0.0019 19.1 4.1 23 85-107 75-97 (102)
286 PF04226 Transgly_assoc: Trans 38.8 59 0.0013 16.8 3.9 18 89-106 3-20 (48)
287 KOG2325|consensus 38.4 2.2E+02 0.0047 23.1 8.0 38 44-81 264-301 (488)
288 KOG3626|consensus 36.5 39 0.00084 28.7 2.9 59 46-105 101-160 (735)
289 PF04341 DUF485: Protein of un 35.6 98 0.0021 18.4 7.4 40 34-73 6-47 (91)
290 KOG4830|consensus 34.5 47 0.001 24.7 2.7 52 30-81 189-240 (412)
291 PF13000 Acatn: Acetyl-coenzym 33.3 16 0.00035 29.4 0.3 62 46-107 4-70 (544)
292 PF09605 Trep_Strep: Hypotheti 32.1 1.7E+02 0.0037 20.1 8.0 21 87-107 162-182 (186)
293 TIGR00880 2_A_01_02 Multidrug 32.0 1.2E+02 0.0026 18.3 9.2 11 91-101 101-111 (141)
294 PF02487 CLN3: CLN3 protein; 31.8 2.6E+02 0.0056 22.1 14.6 42 136-177 332-377 (402)
295 PF01810 LysE: LysE type trans 30.1 1.8E+02 0.0038 19.6 8.7 18 90-107 146-163 (191)
296 PF02990 EMP70: Endomembrane p 29.6 3.1E+02 0.0068 22.4 7.7 29 82-110 302-330 (521)
297 TIGR00949 2A76 The Resistance 28.4 1.9E+02 0.0041 19.4 6.1 10 95-104 148-157 (185)
298 TIGR03061 pip_yhgE_Nterm YhgE/ 26.2 1.7E+02 0.0037 19.3 4.3 17 35-51 3-19 (164)
299 PF04547 Anoctamin: Calcium-ac 25.9 3.4E+02 0.0073 21.5 10.1 44 33-76 113-156 (452)
300 TIGR00769 AAA ADP/ATP carrier 25.9 3.6E+02 0.0077 21.8 11.7 61 42-107 7-74 (472)
301 PF13073 DUF3937: Protein of u 25.3 1.3E+02 0.0029 16.6 3.6 16 61-76 24-39 (73)
302 KOG2601|consensus 25.3 3.5E+02 0.0077 21.6 6.9 61 46-106 31-92 (503)
303 COG2715 SpmA Uncharacterized m 24.3 1.8E+02 0.0039 20.0 3.9 46 62-107 143-189 (206)
304 COG1811 Uncharacterized membra 24.3 2.7E+02 0.0059 19.9 5.8 47 89-144 15-61 (228)
305 KOG1277|consensus 24.2 1.3E+02 0.0028 24.2 3.6 36 82-117 328-363 (593)
306 PRK02935 hypothetical protein; 23.3 2E+02 0.0042 17.9 5.9 21 115-135 13-33 (110)
307 COG1280 RhtB Putative threonin 23.0 2.7E+02 0.0058 19.4 9.1 14 61-74 131-144 (208)
308 TIGR00939 2a57 Equilibrative N 23.0 3.9E+02 0.0084 21.2 9.2 123 51-174 5-145 (437)
309 PF04474 DUF554: Protein of un 22.3 3E+02 0.0066 19.7 5.6 15 117-131 33-47 (226)
310 PF11023 DUF2614: Protein of u 21.7 2.2E+02 0.0048 17.9 5.7 17 115-131 12-28 (114)
311 PF05052 MerE: MerE protein; 21.2 55 0.0012 18.6 0.9 10 1-10 1-10 (75)
312 COG4591 LolE ABC-type transpor 21.0 3.2E+02 0.0068 21.6 5.3 9 73-81 308-316 (408)
313 PF09527 ATPase_gene1: Putativ 20.1 1.5E+02 0.0033 15.4 5.7 18 88-105 11-28 (55)
No 1
>KOG2532|consensus
Probab=99.88 E-value=1.5e-21 Score=149.37 Aligned_cols=174 Identities=32% Similarity=0.599 Sum_probs=144.6
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCCcccccCCCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy10147 1 MSSPDVEP----VSRRPTVPPPQPPPSAKMVTITNGPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGAN 76 (179)
Q Consensus 1 ~~~p~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~ 76 (179)
.|+|++++ +|++.+.+...+++.++ ..+.||+++++++.+|..++..++.+++.+.+.+|+|+|+.+++|+|
T Consensus 217 ~d~P~~h~~is~~El~~I~~~k~~~~~~~----~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~ 292 (466)
T KOG2532|consen 217 SDSPSKHPNISEKELKYIEKGKSEAHVKK----KPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD 292 (466)
T ss_pred cCCcccCCCCCHHHHHHHHhcccccccCC----CCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC
Confidence 37777765 56666655544332221 15789999999999999999999999999999999999999999999
Q ss_pred cccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcch--HHHHHH---HHHHHH
Q psy10147 77 SHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDN--LLFAVI---ISMGLS 150 (179)
Q Consensus 77 ~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~ 150 (179)
..+.| +.++|++...+..+++|.++||+.+|..+....||.+..++..+.++.++.+.+.++ .+..++ ++.++.
T Consensus 293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~ 372 (466)
T KOG2532|consen 293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS 372 (466)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc
Confidence 99999 699999999999999999999998876677778999999999999888888777652 323333 667788
Q ss_pred HhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 151 AFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+...++......|..|++.+...|+.|+
T Consensus 373 g~~~~Gf~~~~~~~apq~a~~l~g~~~~ 400 (466)
T KOG2532|consen 373 GFNISGFYKNHQDIAPQHAGFVMGIINF 400 (466)
T ss_pred ccchhhhHhhhhhccchHHHHHHHHHHH
Confidence 8888889999999999999999998875
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=5e-17 Score=120.31 Aligned_cols=138 Identities=19% Similarity=0.250 Sum_probs=99.0
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
++-+++||.+|.+++++++.+..-|++..|.|.|+.|+.|+|..+++. ..+.-+++..|.+++||+|||+.+.+
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr----- 319 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR----- 319 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc-----
Confidence 345778999999999999999999999999999999999999999994 77888999999999999999987431
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcchH--HHHHH--HHHHHHHhh-hhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVDNL--LFAVI--ISMGLSAFN-SAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
|....++.+++..+.+..+...++. +...+ ..+|++-.. ....-....|..|++ .|++.|+.+.
T Consensus 320 -R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 320 -RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred -cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 3333334444444444444444322 32222 222221111 233566778888987 9999998765
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.72 E-value=4.1e-16 Score=120.45 Aligned_cols=147 Identities=25% Similarity=0.434 Sum_probs=102.9
Q ss_pred CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 32 GPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
+.+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+++ +..++.++..++.+++|+++||+.+|...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~ 330 (465)
T TIGR00894 251 SLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTL 330 (465)
T ss_pred CCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999999999999999999999 57888999999999999999998866433
Q ss_pred hh-hhHHHHHHHHhHHhHHHHHHHhh-cchHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 111 VL-TVRRLMTSIGLIGPAVFLIFFCA-VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 111 ~~-~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
.+ ..++.....+.....+....... ..+.+..+. ++.+..+......+....|..|+.+|++.|+.|+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 403 (465)
T TIGR00894 331 SLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGL 403 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHH
Confidence 22 22333333332222222222222 222332222 2222333334455666778888889999998875
No 4
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.62 E-value=1.7e-14 Score=111.58 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=89.9
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
++++++.+|...+..++.....+++.+|+|.|+++.+|+|+.+++ +...+.++..++.+++|+++||+++| +
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-------~ 325 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-------R 325 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------c
Confidence 378899999999999998888999999999999999999999988 47778888999999999999999765 2
Q ss_pred HHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhh-hhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 116 RLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFN-SAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.................+...++.+...+ +..+..... .........|..|++ +|++.|+.|+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~ 392 (467)
T PRK09556 326 ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGT 392 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 11111111111111112222223332222 222221111 112235666888875 9999999875
No 5
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.54 E-value=1.6e-13 Score=102.62 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=96.9
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+.+++++++++|...+..++.....+.+..+.|.|+++.+|+++.+++ +..+..+.+.++.+++|+++||+++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~----- 291 (366)
T TIGR00886 217 DQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA----- 291 (366)
T ss_pred HHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----
Confidence 456788899999888888887778888999999999999999999988 56677788899999999999999865
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
|...............+.+.... +.+..+. +.....+...+..++...+..|+++|++.|+.++
T Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~ 360 (366)
T TIGR00886 292 --RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGA 360 (366)
T ss_pred --hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHH
Confidence 22222222222222222222222 2322222 3333444556667888888889889999998875
No 6
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.52 E-value=1.1e-12 Score=98.37 Aligned_cols=145 Identities=18% Similarity=0.245 Sum_probs=96.2
Q ss_pred CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 32 GPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
+..+++++++++++...+..++.....+.+..+.|.|+++.+|+++.+++ +.....+...++.+++|+++||+++|...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 284 (399)
T TIGR00893 205 KYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS 284 (399)
T ss_pred ccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34577889999999999999999899999999999999999999998888 47777888999999999999999876311
Q ss_pred hhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 111 VLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
... .......+.+............+..+..+. +..+..+ ..+..++...|..|++ +|++.|+.++
T Consensus 285 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (399)
T TIGR00893 285 LVF-ARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINS 354 (399)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHH
Confidence 100 011111111111111111111222222222 2222222 3566788889988765 9999998764
No 7
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.50 E-value=5.7e-13 Score=103.42 Aligned_cols=143 Identities=11% Similarity=0.037 Sum_probs=96.9
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.+++.++++++|...+..++.....+.+..|+|.|+.+++|+++.+++ +..++.+++.++.+++|+++||+++|...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~- 322 (476)
T PLN00028 244 VLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR- 322 (476)
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc-
Confidence 356678889999888877777777778889999999998999999988 577888999999999999999998764321
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
.|+.......++.++..+.+...++.+..+. +.....+...+..++...+..|+++|++.|+.+.
T Consensus 323 -~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 390 (476)
T PLN00028 323 -GRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGA 390 (476)
T ss_pred -hhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhc
Confidence 1333333333333333333333333332222 2222222334456667777778889999988764
No 8
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.50 E-value=3.6e-13 Score=99.95 Aligned_cols=137 Identities=14% Similarity=0.220 Sum_probs=100.4
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.+++.++++++.|.+.+.++....++-++..++|.|+++++|.++.++| +.+.....+.+..+++|+++||++.+
T Consensus 209 ~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~---- 284 (417)
T COG2223 209 AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR---- 284 (417)
T ss_pred hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch----
Confidence 4577888999999999999999999999999999999999999999999 57777788999999999999999865
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhc-------chHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAV-------DNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
|.... ....+++....+... .+....+. ....+.+...+..+..+...+|++.|.+.|++..
T Consensus 285 ---rv~~~--~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga 356 (417)
T COG2223 285 ---RVTLA--VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGA 356 (417)
T ss_pred ---hHHHH--HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHH
Confidence 33222 222222222222221 12222222 2223444556668888888899999999988764
No 9
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.50 E-value=8.8e-13 Score=101.17 Aligned_cols=138 Identities=12% Similarity=0.160 Sum_probs=89.5
Q ss_pred CcHHHHhhcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 33 PRWISFISHWSLWSVYIAHFA-MNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
.++++++++++.+...+...+ ....+|.+.+|+|.|+++.+|++..+.+ ...+..+...++.++.|+++||++||
T Consensus 233 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr--- 309 (432)
T PRK10406 233 GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR--- 309 (432)
T ss_pred ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---
Confidence 358889999988876665554 3677888999999999998999988887 46667777788889999999999765
Q ss_pred hhhhHHHHHHHHhHHhHHHH-HH--HhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 111 VLTVRRLMTSIGLIGPAVFL-IF--FCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+ .....+.+...... +. ....++.+..+. ++.+..+...+..+....|.+|++ |+++.|+.+.
T Consensus 310 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~ 379 (432)
T PRK10406 310 ----T-SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYA 379 (432)
T ss_pred ----H-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHH
Confidence 2 22222221111111 11 111222232222 222333333445678889999875 9999988653
No 10
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.47 E-value=4.3e-12 Score=94.99 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=90.0
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.++++++++.+|...+..++.....+.+..|.|.|+++.+|+++.+++ +.....++..++.+++|+++||..+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---- 283 (379)
T TIGR00881 208 FLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR---- 283 (379)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc----
Confidence 456788899999998888888888889999999999999999999888 477777888999999999999875431
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhh--cchHHHHHH--HHHHHHH-hhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCA--VDNLLFAVI--ISMGLSA-FNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
|.................+.. ..+.+.... +..+... ......+....|..|++ +|++.|+.++
T Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 353 (379)
T TIGR00881 284 --RGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGF 353 (379)
T ss_pred --chHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHH
Confidence 111111111111111111211 122222222 2222211 12333456778888765 9999998875
No 11
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.45 E-value=1.7e-12 Score=97.67 Aligned_cols=135 Identities=12% Similarity=0.031 Sum_probs=88.5
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+++++++++.+|...+..++....+|++.+|+|+|+++ .|++.. ++ ...++.+.+.+ ..++++||..||+.
T Consensus 184 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~~~r~~~--- 255 (368)
T TIGR00903 184 EFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLI---GVAVIPDRVARAGL--- 255 (368)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHH---HHHHhhHHhhhhhh---
Confidence 47789999999999999999999999999999999976 688865 55 46666665555 45899999866421
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
|+.......+..++....+....+.+..+. ++..+.....+..+++.+|.+|++ ||++.|+.|+
T Consensus 256 --r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~ 323 (368)
T TIGR00903 256 --RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGF 323 (368)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhH
Confidence 122121122222222323333333332222 222233333455788999999886 9999998875
No 12
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=9.1e-12 Score=96.14 Aligned_cols=70 Identities=19% Similarity=0.248 Sum_probs=60.8
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.+++++.+|...+..++.....+++..|+|.|++++.|++..+++ +..+..++..++.+++|+++||+++
T Consensus 248 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~ 318 (452)
T PRK11273 248 YVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR 318 (452)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 367889999998888888888899999999999999999988888 4666677888899999999999954
No 13
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.42 E-value=1.6e-11 Score=94.37 Aligned_cols=69 Identities=20% Similarity=0.222 Sum_probs=60.2
Q ss_pred HhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 38 FISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
+++++.+|...+..++.....+++.+|+|.|+++.+|+++.+++ ......+++.++.+++|+++||+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~ 308 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFN 308 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhcc
Confidence 56788999888888888788888899999999888999999988 4777788899999999999999854
No 14
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.42 E-value=1.3e-11 Score=93.84 Aligned_cols=136 Identities=16% Similarity=0.235 Sum_probs=88.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++++++++|.+|...+..++.....+++.+|.|.|+++ +|+++.+.+ +.....+++.++.++.|+++||+++|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~----- 287 (402)
T TIGR00897 214 AATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM----- 287 (402)
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----
Confidence 45678899999998888888888999999999999865 899998888 46677888999999999999999764
Q ss_pred hhHHHHHHHHhHHhHH---HHHHHh--hcchHHHHHH--HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAV---FLIFFC--AVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+ .....+.+...+ .+.... ..++.+...+ +..+..............+..|+++|++.|+.|+
T Consensus 288 --~-~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 357 (402)
T TIGR00897 288 --N-TVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAPKHKGAAMSVLNL 357 (402)
T ss_pred --h-HHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcchhHHHHHHHHH
Confidence 2 111111111111 111111 1123332222 2222211112233455667778889999998875
No 15
>PRK10133 L-fucose transporter; Provisional
Probab=99.37 E-value=3.2e-11 Score=92.83 Aligned_cols=136 Identities=5% Similarity=-0.030 Sum_probs=92.9
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYM-SSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l-~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
.++++++++|.++...+..++.....++...|.|.|+ ++.+|+++.++++ .....++..+|++++|++.||+++|
T Consensus 249 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~--- 325 (438)
T PRK10133 249 ASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH--- 325 (438)
T ss_pred hhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---
Confidence 3467889999998888888888888888888999985 6678999999995 6777788899999999999999764
Q ss_pred hhhhHHHHHHHHhHHhHHHHHHHhhcchHHHH-HH-HHHHHHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 111 VLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFA-VI-ISMGLSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
+... .+.+.....+......++.+.. .+ +...+.+...+..++...+..|++.+++.++.+
T Consensus 326 -----~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~ 388 (438)
T PRK10133 326 -----KVLA-AYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV 388 (438)
T ss_pred -----HHHH-HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh
Confidence 2222 2232322222222222222221 12 333345555777888888888877767766554
No 16
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.34 E-value=5e-11 Score=91.69 Aligned_cols=71 Identities=17% Similarity=0.263 Sum_probs=61.6
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+++++.+|...+..++.....+++.+|+|.|+++..|+++.++++ ..+..+.+.++++++|+++||++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 246 YVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4678899999888888888888999999999999989999999884 6667788899999999999998643
No 17
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.34 E-value=3.5e-11 Score=91.90 Aligned_cols=135 Identities=17% Similarity=0.203 Sum_probs=85.4
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSY-LGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+++++ ++.+|...+..++....++++.+|+|.|+++. .|+++.+++ +...+.+...+|.+++|+++||+++|
T Consensus 236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r----- 309 (412)
T TIGR02332 236 LREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER----- 309 (412)
T ss_pred HHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-----
Confidence 44444 68889999999999999999999999999883 467877888 57888899999999999999999754
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH-HHHHHHHh--hhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI-ISMGLSAF--NSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
+.. .....+.....+......++....+. +..+..+. ..+..+....|..|+ ++|++.|+.|+
T Consensus 310 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~ 376 (412)
T TIGR02332 310 --KHH-TALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINA 376 (412)
T ss_pred --HHH-HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHH
Confidence 221 11122222222222212222222222 22222222 122344555666665 59999998875
No 18
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=6.6e-11 Score=88.21 Aligned_cols=137 Identities=11% Similarity=0.050 Sum_probs=92.3
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIM-QWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
.+++++++++.++...+..+......+... .+.|.|.++.+|+++.+.+ +.....++..++.++.+++.||.+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 277 (365)
T TIGR00900 201 EGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM--- 277 (365)
T ss_pred hHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh---
Confidence 346678889999888887777777777666 8999999988999998888 46677788889999999999998653
Q ss_pred hhhhHHHHHHHHhHHhHHHHHHHhhcch-HHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 111 VLTVRRLMTSIGLIGPAVFLIFFCAVDN-LLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.....+....++........++ .+...+ +..+ ..+...+...+...|..|++ +|++.|+.++
T Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (365)
T TIGR00900 278 ------ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFS 344 (365)
T ss_pred ------HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 2233333333333333333332 333222 2222 22333555678888888765 9999998764
No 19
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.32 E-value=3.1e-11 Score=90.79 Aligned_cols=136 Identities=11% Similarity=0.173 Sum_probs=88.4
Q ss_pred CCcHHHHhhcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcC
Q psy10147 32 GPRWISFISHWS--LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 32 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
..++++++++++ ++...+..++.....+....++|.|+++++|+++.+.+ +.....+...++.+++|+++||+++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~- 285 (394)
T TIGR00883 207 RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR- 285 (394)
T ss_pred cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-
Confidence 345677777765 77777777777788888899999999998999998888 46677788899999999999999764
Q ss_pred CchhhhHHHHHHHHhHHhHHH---HHHHhhcchHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHH
Q psy10147 109 WTVLTVRRLMTSIGLIGPAVF---LIFFCAVDNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAI 175 (179)
Q Consensus 109 ~~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi 175 (179)
+.....+.+..... ...+...++.+.... +.. ...+...+..++...|..|++ |+++.++
T Consensus 286 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 286 -------PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeee
Confidence 22222222222111 111111223333222 222 223344566788899998865 7766554
No 20
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.29 E-value=9.3e-11 Score=87.70 Aligned_cols=135 Identities=10% Similarity=0.089 Sum_probs=89.2
Q ss_pred cHHHHhhcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhh-HHHHHHHHHHHHHHHHHHHhcC
Q psy10147 34 RWISFISHWS---LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMP-YVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 34 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~-~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
+++++++++. ++...+..++.....+....++|.|+++ +|+++.+.+ +.... .+...++.+++|+++||+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~- 275 (356)
T TIGR00901 198 PIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL- 275 (356)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-
Confidence 5667777765 7777777777778888889999999988 899999888 44433 356789999999999999864
Q ss_pred CchhhhHHHHHHHHhHHhHHHHHHHhhc-----------chHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHH
Q psy10147 109 WTVLTVRRLMTSIGLIGPAVFLIFFCAV-----------DNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTF 173 (179)
Q Consensus 109 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 173 (179)
+ ... .+.+..++....+... ++.+.... +.....+...+...+...+..|++ +|+..
T Consensus 276 ------~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~ 347 (356)
T TIGR00901 276 ------Y-ALL-LFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQM 347 (356)
T ss_pred ------H-HHH-HHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHH
Confidence 2 222 2223322222222111 22232222 222334455777899999998765 99999
Q ss_pred HHhhc
Q psy10147 174 AISNT 178 (179)
Q Consensus 174 gi~~~ 178 (179)
|+.++
T Consensus 348 g~~~~ 352 (356)
T TIGR00901 348 ALLSS 352 (356)
T ss_pred HHHHH
Confidence 98764
No 21
>KOG2533|consensus
Probab=99.29 E-value=2.3e-11 Score=94.16 Aligned_cols=76 Identities=20% Similarity=0.272 Sum_probs=68.4
Q ss_pred CCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 30 TNGPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
.++..+++.+++|.+|..++..++.....|++.+|+|.|+.+..|+|..++. +.....++++++.+++|+++||+.
T Consensus 261 ~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 261 FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 3455678999999999999999999999999999999999996679999999 577788999999999999999963
No 22
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.29 E-value=2.1e-10 Score=86.16 Aligned_cols=135 Identities=14% Similarity=0.160 Sum_probs=83.2
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
.++.+++++++......++..........++|.|+++++|.++.+.++ .........++.+++|+++||+++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~------ 265 (375)
T TIGR00899 192 VRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR------ 265 (375)
T ss_pred hhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch------
Confidence 445667777776665555555555666778999999999999988884 5555556677888999999999764
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HH-HHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--IS-MGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+.. ..+.+...+........++.+.... +. ....+...+.......|..|++++++.|+.+.
T Consensus 266 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (375)
T TIGR00899 266 --RLM-LLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTN 330 (375)
T ss_pred --hHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHH
Confidence 222 2233333322222222333333222 21 22233334556677788888887788887653
No 23
>KOG4686|consensus
Probab=99.28 E-value=4.2e-11 Score=85.42 Aligned_cols=128 Identities=10% Similarity=0.138 Sum_probs=91.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMT 119 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~ 119 (179)
.|++|...++.+++..+++-+.+..|.++++.+|+|+.+++ .....+.++.+.+++.|.++||.+++ - ++.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-------~-~wv 334 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-------L-WWV 334 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-------e-hhH
Confidence 57899999999999999999999999999999999999999 67788888999999999999999875 1 222
Q ss_pred HHHhHHhHHHHHHHhh-cchHHHHHH-HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 120 SIGLIGPAVFLIFFCA-VDNLLFAVI-ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..+.+.....-..+.+ .-+++..+. +++.. ......+|..++.+.|++ .|++.|...
T Consensus 335 ~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsy-sllAcslWP~va~~vpE~qLGTaygf~q 394 (459)
T KOG4686|consen 335 ASACILTLLGHSGLFFTFLSPYTSMTFLGLSY-SLLACSLWPCVASLVPEEQLGTAYGFIQ 394 (459)
T ss_pred HHHHHHHHHHhhhHHhhhccHHHHHHHHhhhH-HHHHHHHhhhhhhhCCHHHhcchHHHHH
Confidence 2222222222222221 123443333 22211 122334799999999987 899988765
No 24
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.28 E-value=2.2e-11 Score=90.35 Aligned_cols=137 Identities=20% Similarity=0.303 Sum_probs=90.0
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-cccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGAN-SHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~-~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++.+++++.+|......++.....+....++|.|+++.+|++ ..+.+ +..+..+.+.++.++.|+++||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 273 (352)
T PF07690_consen 199 FKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR----- 273 (352)
T ss_dssp CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----
T ss_pred cccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----
Confidence 667778887775666666666788889999999999999999 67777 47777888888899999999997653
Q ss_pred hhHHHHH-HHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 113 TVRRLMT-SIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
+.... ..........+......++....+. +..+ ..+...+...+...+..|+ ++|++.|+.++
T Consensus 274 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 342 (352)
T PF07690_consen 274 --RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNS 342 (352)
T ss_dssp --HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 22222 2222222211111122222233222 2222 3444566788888998875 59999998874
No 25
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.27 E-value=6.1e-10 Score=82.03 Aligned_cols=131 Identities=11% Similarity=0.014 Sum_probs=87.9
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSY--LGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
+++++|.++...+..+++....-++..|++.|+.+. +|+++.+++ .......+..+|.++++++.||++.|
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~------ 208 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG------ 208 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH------
Confidence 567788899888888888888999999999999864 689998888 47778889999999999999999754
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccchhHHHHHHHh
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPNHAGVTFAIS 176 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~ 176 (179)
+.+ ..+.+...+........+....... +...+.+..++...+...+..|++.++++++.
T Consensus 209 --~~l-~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~ 270 (310)
T TIGR01272 209 --RYL-AFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL 270 (310)
T ss_pred --HHH-HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH
Confidence 222 2233333333322222222221112 22233344466667777777777766666654
No 26
>PRK03545 putative arabinose transporter; Provisional
Probab=99.27 E-value=2.7e-10 Score=86.32 Aligned_cols=136 Identities=10% Similarity=0.119 Sum_probs=86.0
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+++++++++.++...+..++.....+....++|.|+++.+|+++.+++ +.....+++.++.++.|+++||+++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~----- 271 (390)
T PRK03545 197 SLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG----- 271 (390)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----
Confidence 456788999988777777776677777788899999988899998888 46667788899999999999998643
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHH-HhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLS-AFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
.......+............++.+.... +..+.. ............+..|+++|.+.|+.+.
T Consensus 272 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 336 (390)
T PRK03545 272 ----FLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSG 336 (390)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 2222222222222222222333332222 222221 1223335566677778778888776653
No 27
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.27 E-value=5.3e-10 Score=84.57 Aligned_cols=133 Identities=11% Similarity=0.084 Sum_probs=88.7
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++++++|+|++|...+..++.....+.+..+.|.|+++ .|+++.+.| +.....+...++.++.+++.||++.|
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~----- 270 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR----- 270 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----
Confidence 46789999999999988888888888999999999977 799999888 45555555666666667777776532
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
..+..+.+...+........++.+..+. +-....+...+....++.+. |+ +++++.++.+
T Consensus 271 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 271 ----DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred ----HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHH
Confidence 3344566665555555555555554333 22223344444456666666 54 4777766654
No 28
>PRK10054 putative transporter; Provisional
Probab=99.26 E-value=1.9e-10 Score=87.43 Aligned_cols=127 Identities=13% Similarity=0.166 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+.++.+.+..++...+.+....++|.|+++++|+|..+.|+ .....+...++.++.|+++||+++| ..+.
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k---------~~~~ 77 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK---------RYML 77 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc---------hhHH
Confidence 34667777888888889999999999999999999999994 7777788899999999999999865 2233
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.+.+...+..+.+.+.++.+..++ ...+ ..+...+.......|..|+ +|+.+.|+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (395)
T PRK10054 78 LAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNY 138 (395)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHH
Confidence 344444444444444555444333 1111 2222344466777787765 4888877765
No 29
>PRK09952 shikimate transporter; Provisional
Probab=99.26 E-value=3.6e-10 Score=87.00 Aligned_cols=131 Identities=10% Similarity=0.064 Sum_probs=80.7
Q ss_pred HHhhcHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q psy10147 37 SFISHWSLWSVYI-AHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTV 114 (179)
Q Consensus 37 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~ 114 (179)
.++++++.|...+ ..++.....|....|.|.|+++.+|++..... ...+..+...++.++.|+++||++||
T Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr------- 316 (438)
T PRK09952 244 ALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR------- 316 (438)
T ss_pred HHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-------
Confidence 4667777766544 45566778888999999999998999886544 34445566788889999999999865
Q ss_pred HHHHHHHHhHHhHHHHHH--Hh-hcc-hHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 115 RRLMTSIGLIGPAVFLIF--FC-AVD-NLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 115 r~~~~~~~~~~~~~~~~~--~~-~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+ ... .+.+...+.... .. ... ..+..+. +.....+...+..++++.|.+|.+ |+++.|+.
T Consensus 317 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~ 384 (438)
T PRK09952 317 R-VYI-TGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVG 384 (438)
T ss_pred H-HHH-HHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHH
Confidence 2 222 222222222111 11 112 2222222 222233344556788999999865 87777764
No 30
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.25 E-value=4.6e-10 Score=83.96 Aligned_cols=72 Identities=15% Similarity=0.219 Sum_probs=60.8
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+++++++.+|...+..++....++....|+|.|+++ .|+|+.+.+ +.....++..+++++.|+++||+++|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 190 PVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred CchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 4577889998887777777778888899999999987 699998888 57778889999999999999998543
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.25 E-value=6.2e-10 Score=86.88 Aligned_cols=136 Identities=11% Similarity=0.159 Sum_probs=81.1
Q ss_pred CCcHHHHhhc-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcC
Q psy10147 32 GPRWISFISH-WSLWS-VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 32 ~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
+.++++++++ ++.+. .....++....+|++..|+|.|+++.+|++..++++ .....++..++.+++|+++||++||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr- 316 (490)
T PRK10642 238 KVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR- 316 (490)
T ss_pred cCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-
Confidence 3467777763 33332 333445566788899999999999888998877664 5556677889999999999999864
Q ss_pred CchhhhHHHHHHHHhHH-hH--HHHHHHhhcchHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 109 WTVLTVRRLMTSIGLIG-PA--VFLIFFCAVDNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 109 ~~~~~~r~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+. +..+.+. .. ...+.....++....+. +.. ...+...+.......+.+|++ ||++.|+.
T Consensus 317 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~ 383 (490)
T PRK10642 317 -------PF-VILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA 383 (490)
T ss_pred -------HH-HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHH
Confidence 22 2222221 11 11111112222222222 111 122333445667777888876 99888763
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.24 E-value=4.3e-10 Score=84.11 Aligned_cols=135 Identities=15% Similarity=0.120 Sum_probs=85.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+.+++++++.++...+..++..........+.+.|.++ +|++..+.+ +.....+...++.++.|+++||+++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----- 270 (377)
T TIGR00890 197 TVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ----- 270 (377)
T ss_pred hHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----
Confidence 45678889988887777776666666666777777654 788887777 47778888999999999999999764
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcch--HHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDN--LLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+. ...+.+...+........++ ....+. +.....+...........|..|++ +|++.|+.+.
T Consensus 271 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 338 (377)
T TIGR00890 271 ---KT-MSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYT 338 (377)
T ss_pred ---hh-hhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHH
Confidence 22 22333333333333332222 111111 111122233445567788888755 9998888764
No 33
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.23 E-value=2.5e-10 Score=87.78 Aligned_cols=73 Identities=10% Similarity=0.094 Sum_probs=58.2
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++++++|+|+.|...+.+++.+.++.++..++|.|+++.+ +..... ...+..+.+.++.+++|+++||++++
T Consensus 243 ~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~ 316 (462)
T PRK15034 243 ADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV 316 (462)
T ss_pred HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch
Confidence 34667899999999999999999999999999999998865 332222 23344577889999999999999864
No 34
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.23 E-value=4.3e-10 Score=84.61 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=62.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
++++++++++++...+..++.....+.+..+.|.++.+.+|+++.+.+ +.....++..++.+++|++.||+++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~ 260 (377)
T PRK11102 186 NFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL 260 (377)
T ss_pred HHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 456788899888877777777777888888999999998999999988 46677788899999999999999764
No 35
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.23 E-value=2.5e-10 Score=85.96 Aligned_cols=136 Identities=15% Similarity=0.170 Sum_probs=88.3
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++++++++++++...+...+.....+....+.|.++++.+|+++.+.+ +.....++..++.+++|++.||+++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~----- 272 (385)
T TIGR00710 198 TFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK----- 272 (385)
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----
Confidence 456788899998888877777778888899999999999999999988 46667788899999999999998764
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhh---cc-hHH-HHHH--HHHHH-HHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCA---VD-NLL-FAVI--ISMGL-SAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+... .+.....+....+.. .. ..+ ..+. ...+. .+...+.......|..|+++|++.++.|+
T Consensus 273 --~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 342 (385)
T TIGR00710 273 --SLLR--MGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGT 342 (385)
T ss_pred --HHHH--HHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHH
Confidence 2211 122222211111111 11 111 1111 11111 22334455666677778778888887664
No 36
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.22 E-value=3.6e-10 Score=88.34 Aligned_cols=133 Identities=12% Similarity=-0.019 Sum_probs=90.5
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
++++++.++...+..++.....++...++|.|+|+.+|+|+.++|+ .....++..++.++.|++.||+++|
T Consensus 254 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-------- 325 (495)
T PRK14995 254 RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-------- 325 (495)
T ss_pred HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------
Confidence 6889999988888888888889999999999999999999999995 5566678889999999999999753
Q ss_pred HHHHHHHhHHhHHHHHHHhh---cchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 116 RLMTSIGLIGPAVFLIFFCA---VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+ ....+.+...+....+.. .++.+.... +.....+...........+..|++ +|.+.++.|+
T Consensus 326 ~-~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 394 (495)
T PRK14995 326 L-VATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETM 394 (495)
T ss_pred H-HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHH
Confidence 2 223344333333322221 122322222 222223333445566666666654 8888888774
No 37
>PRK03699 putative transporter; Provisional
Probab=99.20 E-value=9.8e-10 Score=83.44 Aligned_cols=67 Identities=9% Similarity=0.138 Sum_probs=57.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
++.++...+..++.....+.+..|+|.|+++++|+|+.+++ +.....++..++.+++|+++||+++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 271 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ 271 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh
Confidence 45667777777777788889999999999999999999988 57777888999999999999999764
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=99.20 E-value=1e-09 Score=84.33 Aligned_cols=134 Identities=13% Similarity=0.178 Sum_probs=80.4
Q ss_pred HHHHhhcHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 35 WISFISHWSLWSV-YIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++++.++++.+.. .+..++.....+.+..|.|.|+++.+|++..++++ ..+..+++.++.+++|+++||+++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r----- 304 (434)
T PRK15075 230 FRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR----- 304 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----
Confidence 4445556655543 33344456677888999999999989999888884 6667788899999999999999864
Q ss_pred hhHHHHHHHHhHHhHHHHHH---HhhcchHHHH-H-H-HHHHHHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 113 TVRRLMTSIGLIGPAVFLIF---FCAVDNLLFA-V-I-ISMGLSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+.......+........ ....++.... . . +.....+...+..+....|..|++ ||++.|+.
T Consensus 305 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~ 372 (434)
T PRK15075 305 ---PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLA 372 (434)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHH
Confidence 22222121111111111 1111222111 1 1 222233333445667888988876 88887764
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.19 E-value=7.9e-10 Score=85.85 Aligned_cols=133 Identities=16% Similarity=0.080 Sum_probs=89.3
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
++++++.++...+..++.....++..+++|.|+++.+|+++.++++ .....++..++.+++|++.||+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-------- 321 (485)
T TIGR00711 250 RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-------- 321 (485)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH--------
Confidence 6788999988888888888889999999999999999999999994 6667788899999999999998753
Q ss_pred HHHHHHHhHHhHHHHHHHh--hc-c-hHHHHHH--HHH-HHHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 116 RLMTSIGLIGPAVFLIFFC--AV-D-NLLFAVI--ISM-GLSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.....+.+...+...... .. + +.+.... +.. ...+...........+..|+ ++|++.|+.|+
T Consensus 322 -~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 391 (485)
T TIGR00711 322 -KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNF 391 (485)
T ss_pred -HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHH
Confidence 223334444433333332 11 1 2222222 111 12222233444555565664 59999998774
No 40
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.19 E-value=5.9e-10 Score=83.44 Aligned_cols=126 Identities=13% Similarity=0.208 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSI 121 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~ 121 (179)
.+|..++..+......+.+..++|.++++++|+|+.+.++ .....++..++.+++|+++||+++| .....
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR---------YTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch---------HHHHH
Confidence 3567777788888888889999998899999999999994 7788889999999999999999864 22334
Q ss_pred HhHHhHHHHHHHhhcc-hHHHHHH--HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 122 GLIGPAVFLIFFCAVD-NLLFAVI--ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 122 ~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
+.+...+..+.....+ +.+..++ +..+..+.........+.+..|+ +|+.+.++.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 132 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKIQGTALGLAA 132 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 4444444444444444 4444433 33333333344456777888765 4888887754
No 41
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.18 E-value=1.1e-09 Score=83.18 Aligned_cols=70 Identities=13% Similarity=0.200 Sum_probs=59.4
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+.+++++.|...+..++....+++..+|+|.|+++ +|+++.++| +..+..++..++.++.|++.||+++|
T Consensus 200 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~ 270 (393)
T PRK09705 200 RVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR 270 (393)
T ss_pred ccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 45667888887777777788888999999999987 799999999 57778888999999999999998654
No 42
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.18 E-value=3e-09 Score=80.50 Aligned_cols=135 Identities=10% Similarity=0.114 Sum_probs=85.6
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.++++++++|.+|...+..++.......+..+.|.|+++ .|+++.+.| +.....+...+..++.|++.||+++|
T Consensus 196 ~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---- 270 (382)
T PRK11128 196 PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR---- 270 (382)
T ss_pred chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH----
Confidence 457899999999988887777777777788888999865 799988888 45555566677777888888887543
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
..+..+.+...+....+...++.+..++ +..+ ..+...+....+..+..++++++..++.+
T Consensus 271 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (382)
T PRK11128 271 -----DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYS 334 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHH
Confidence 2233444444444444444555554333 2222 22333444455555555555666666554
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=99.18 E-value=1.2e-09 Score=82.39 Aligned_cols=127 Identities=15% Similarity=0.137 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+..+...+..++.....+....|+| ++.+.+|+++.+++ +.....++..++.+++|+++||+++| ....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~ 319 (398)
T TIGR00895 250 RITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTAL 319 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHH
Confidence 3445555566666777788888999 55666899998888 47777888999999999999998653 2222
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
...+.............+.+.... +.. ...+...+..++...|..|++ +|++.|+.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 381 (398)
T TIGR00895 320 LLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIG 381 (398)
T ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence 222222222222221223332222 222 233344566788899988765 9999888764
No 44
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.17 E-value=1e-09 Score=85.64 Aligned_cols=138 Identities=12% Similarity=0.187 Sum_probs=87.4
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-h-hhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-T-AMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~-~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
.+++++++++..|...+..++.....+....+.|.|+.+++|+|+.+.++ . ....++..+|.+++|+++||+++|
T Consensus 213 ~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~--- 289 (491)
T PRK11010 213 APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF--- 289 (491)
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH---
Confidence 35778888887777666666666777777888999998889999999984 4 355678899999999999999864
Q ss_pred hhhhHHHHHHHHhHHhH--HHHHHHhhc-chHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 111 VLTVRRLMTSIGLIGPA--VFLIFFCAV-DNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+.....+.+... +....+... ++.+.... +.....+...+..++...+..+++ .++..|+.|.
T Consensus 290 -----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s 359 (491)
T PRK11010 290 -----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSA 359 (491)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 222222221111 111112222 23222221 222233444555677778887765 7777777664
No 45
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.16 E-value=1.9e-09 Score=81.84 Aligned_cols=119 Identities=13% Similarity=0.099 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHH
Q psy10147 50 AHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAV 128 (179)
Q Consensus 50 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~ 128 (179)
.........+.+..++|.|+++.+|+++.+.+ +.....+...++.+++|+++||+++| + .. ..+.+....
T Consensus 224 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~-~~-~~~~~~~~~ 294 (393)
T PRK15011 224 ICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-------F-LM-RVAAVAGVC 294 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H-HH-HHHHHHHHH
Confidence 33444445556677999999999999998888 45555667788899999999999764 2 22 222222222
Q ss_pred HHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 129 FLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 129 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
........++.+..+. +.....+...+.......|..|+++|++.++.+
T Consensus 295 ~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~ 346 (393)
T PRK15011 295 FYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYT 346 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHH
Confidence 2222222333333222 222233333444556678888888888887764
No 46
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.15 E-value=2.1e-09 Score=81.72 Aligned_cols=126 Identities=16% Similarity=0.225 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSI 121 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~ 121 (179)
..+...+..++.....+....|+|.|+++ .|+++.+.+ +.....++..++.++.|+++||+++| +. ...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--------~~-~~~ 290 (406)
T PRK11551 221 ATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPR--------RV-VLL 290 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH--------HH-HHH
Confidence 34444455555566777888899999987 699998888 47777788999999999999999754 22 222
Q ss_pred HhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 122 GLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+.+...+.+..+...++.+...+ +..++ .+...+..++...|..|++ +|++.|+.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 351 (406)
T PRK11551 291 IYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVA 351 (406)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHH
Confidence 33323333333333333333222 22222 2223455677888888765 9999888764
No 47
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.14 E-value=1.9e-09 Score=80.79 Aligned_cols=131 Identities=15% Similarity=0.217 Sum_probs=90.1
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
..+++|+|.++...+..++...+.|...+|+-.++++..|+|....++ .....+++.+|+.++|+++|| +.|
T Consensus 204 ~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~------ 276 (394)
T COG2814 204 LLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR------ 276 (394)
T ss_pred HHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch------
Confidence 557899999999999999999999999999999999999999988884 777889999999999999999 432
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhc-chHHHHHH-HHHHHHHhh----hhchhhhhhhccchhHHHHHHHhh
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAV-DNLLFAVI-ISMGLSAFN----SAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
+.+.. ......+.+..+... ++.+..+. +.. .++. ....+....+..|+.++.+.++++
T Consensus 277 --~~l~~-~~~l~a~~~l~l~~~~~~~~~~~~~~~~--wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~ 341 (394)
T COG2814 277 --RALIA-ALLLLALALLALTFTGASPALALALLFL--WGFAFSPALQGLQTRLARLAPDAADLAGSLNV 341 (394)
T ss_pred --hHHHH-HHHHHHHHHHHHHHhcchHHHHHHHHHH--HHHHhhhhhhHHHHHhcccCCCchHHHHHHHH
Confidence 23322 222222333333333 33433333 222 2222 223444555545677777777654
No 48
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.14 E-value=1.6e-09 Score=82.81 Aligned_cols=135 Identities=12% Similarity=0.097 Sum_probs=83.3
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
+++.++++|.++...+..++.. ..+++..+.|.|+++.+|+++.+.+ +.....++..++.++.+++.||.++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~------ 288 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARP------ 288 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCc------
Confidence 3556777888766655555433 3456778999999998999998888 4666677788888888988887422
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
++. ...+.+...+....+...++.+.... +..++ .+...+...+.+.+..|++ +|++.|+.++
T Consensus 289 --~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 355 (417)
T PRK10489 289 --GLL-MLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTA 355 (417)
T ss_pred --chH-HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 122 22333333333333333444333222 22222 2222344567888888875 9999988754
No 49
>PRK11043 putative transporter; Provisional
Probab=99.13 E-value=1.7e-09 Score=82.21 Aligned_cols=139 Identities=8% Similarity=-0.001 Sum_probs=82.2
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.++++++++++++...+...+.....+.+..+.|.|+++ +|+++.+.++ .....++..+|.++++++.||+++|.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~--- 269 (401)
T PRK11043 194 LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ--- 269 (401)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH---
Confidence 357788999998877766666667777888899998876 7999988885 44455667777888888888876431
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhh--cchHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCA--VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
..+. ................. .++.+..+. +.....+...+.......+..|+++|.+.|+.|+
T Consensus 270 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 338 (401)
T PRK11043 270 --LLPW-LLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNT 338 (401)
T ss_pred --HHHH-HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHH
Confidence 0111 11111111111111111 222222222 1112223334445555566667779999988875
No 50
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.13 E-value=2.5e-09 Score=81.42 Aligned_cols=75 Identities=5% Similarity=-0.088 Sum_probs=60.2
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++++++++|.++...+..++.....+...++.|.|+++.+|+++.+.++ .....++..++.++.|+++||+++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~ 281 (406)
T PRK15402 206 RDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLR 281 (406)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 34667889999988887777776667777888999999989999988884 4555567788999999999998754
No 51
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.13 E-value=1.8e-09 Score=83.58 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=87.8
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
++++++.++...+..++.....+....++|.|+++ .|+++.+++ +..+..++..++.+++|+++||...+ . .|
T Consensus 236 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~---~~ 309 (455)
T TIGR00892 236 SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR--P---HV 309 (455)
T ss_pred HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--H---HH
Confidence 57889999988888888778888888999999876 699999888 47777788889999999999973211 0 02
Q ss_pred HHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 116 RLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+.....+.+...+..+.....++.+..++ +..++ .+...+..++.+.|..|++ +|++.|+.++
T Consensus 310 ~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 376 (455)
T TIGR00892 310 QYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTI 376 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHH
Confidence 22222223322222222333344443322 22222 2233445677778877664 8999888764
No 52
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.12 E-value=1.8e-09 Score=81.71 Aligned_cols=122 Identities=15% Similarity=0.147 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHh
Q psy10147 48 YIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGP 126 (179)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~ 126 (179)
.....+.....+....++|.|+.+++|+++.+.+ +.....++..++.++.|+++||+++| +... .+.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~-~~~~~~ 314 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR--------KAYV-CSLLAG 314 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch--------hhhH-HHHHHH
Confidence 3333444455556778999999999999999888 47777788999999999999999764 2222 222222
Q ss_pred HHH-HHHHhhcchHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 127 AVF-LIFFCAVDNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 127 ~~~-~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
... .......++.+...+ ... .+.+...+.......|..|++ +|++.|+.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 371 (405)
T TIGR00891 315 QLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQ 371 (405)
T ss_pred HHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHH
Confidence 111 111222222222222 111 222223445677788888765 9999988764
No 53
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.10 E-value=3.1e-09 Score=83.22 Aligned_cols=122 Identities=10% Similarity=0.068 Sum_probs=77.7
Q ss_pred HHhhcHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHH-HHhcCCchhh
Q psy10147 37 SFISHWS-LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADN-LVSHSWTVLT 113 (179)
Q Consensus 37 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr-~~~r~~~~~~ 113 (179)
+.+++|+ ++..++..++...++|++..++|.|+++++|++..+++. ............+++|+++|| +++|
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r------ 88 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK------ 88 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH------
Confidence 4557764 888888999999999999999999999999999988773 434333444445789999999 4754
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcc-hHHHHHH--HHHH-HHHhhhhchhhhhhhccch
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVD-NLLFAVI--ISMG-LSAFNSAGFLASHADIAPN 167 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~ 167 (179)
.....+.+...+........+ ..+...+ ...+ ..+...+...+...+.+|+
T Consensus 89 ---~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~ 143 (500)
T PRK09584 89 ---RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK 143 (500)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC
Confidence 233344444444444443332 2222222 2222 2333345566778888763
No 54
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.09 E-value=3.1e-09 Score=81.32 Aligned_cols=135 Identities=16% Similarity=0.125 Sum_probs=80.6
Q ss_pred cHHHHhhcHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q psy10147 34 RWISFISHWSLWSVYIA---HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSW 109 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~ 109 (179)
+++++++++.++..... .++.....+.+..++|.|+++ .|+++.+.+ +.....++..++.+++|+++||+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-- 296 (426)
T PRK12307 220 SMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-- 296 (426)
T ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--
Confidence 56788888876543332 233334445577899999987 599988888 46677788999999999999999754
Q ss_pred chhhhHHHHHHHHhHHhHHHHHHHhh-cchHHHHHH---HHHHHHH-hhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 110 TVLTVRRLMTSIGLIGPAVFLIFFCA-VDNLLFAVI---ISMGLSA-FNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+. ...+.+...+....+.. .......+. .+.+... ...+..+..+.|..|++ +|++.|+.+.
T Consensus 297 ------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 364 (426)
T PRK12307 297 ------KT-FSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYN 364 (426)
T ss_pred ------HH-HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHH
Confidence 22 22333333322222221 112111111 2221111 11334567778888875 9999887653
No 55
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.09 E-value=3.7e-09 Score=80.52 Aligned_cols=124 Identities=13% Similarity=0.166 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
+......++...+.+....++|.|+++++|+|+.+.|+ .....+...+..+++|+++||+++| ..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k---------~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK---------PMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch---------HHHHHHH
Confidence 44556777777888889999999999999999999994 6666777888889999999999754 3344455
Q ss_pred HHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 124 IGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
+...+........++.+...+ +..+. .+...+...+.+.+..|+ +++.+.|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 141 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLM 141 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 555555554444455544333 22232 223345567778888765 5999988865
No 56
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.08 E-value=2.3e-09 Score=83.28 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHH-HhcCCchhhhHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNL-VSHSWTVLTVRRLMT 119 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~-~~r~~~~~~~r~~~~ 119 (179)
+.++..+...+.....+|++..++|.|+++.+|+++.+++ ..........++.+++|+++||+ ++| +. .
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr--------r~-i 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR--------MA-V 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH--------HH-H
Confidence 3466777777888899999999999999999999999988 46666777888999999999999 654 32 3
Q ss_pred HHHhHHhHHHHHHHhhcc-hHHHHHH-HHH--HHHHhhhhchhhhhhhccch---hHHHHHHHh
Q psy10147 120 SIGLIGPAVFLIFFCAVD-NLLFAVI-ISM--GLSAFNSAGFLASHADIAPN---HAGVTFAIS 176 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~---~~g~~~gi~ 176 (179)
..+.+...+....+...+ ....... +.. ...+...+...+.+.|.+|+ +|+++.++.
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~ 143 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLM 143 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHH
Confidence 345444444433333221 1111122 222 22233345567888898864 376666654
No 57
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.07 E-value=1.4e-08 Score=78.31 Aligned_cols=128 Identities=12% Similarity=0.112 Sum_probs=89.6
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHH
Q psy10147 40 SHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLM 118 (179)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~ 118 (179)
.++.++...+......+.++.+....+.+-++++|+|+.|.+ +..++.+.+.++.+..|++.||++.| +..
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R--------~v~ 103 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR--------RWT 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HHH
Confidence 356777777777777777777777777766657999999999 58888889999988899999999864 332
Q ss_pred HHHHhHHhHHHHHHHhhc-----chHHHHHH--HHHHHHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 119 TSIGLIGPAVFLIFFCAV-----DNLLFAVI--ISMGLSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
..+.+..++..+..... ++.+..++ ...++.+..++.....+.+.+|++ +|.+.|+.
T Consensus 104 -~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~~rG~A~Gi~ 168 (462)
T PRK15034 104 -VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKAKQGSALGIN 168 (462)
T ss_pred -HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHhHhHHHHHHH
Confidence 23333334444444432 34444433 444444555666778888888865 99999887
No 58
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.06 E-value=1.1e-08 Score=79.64 Aligned_cols=121 Identities=13% Similarity=0.075 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIG 125 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~ 125 (179)
.+...++.....+....++|. +++++|++..+.++ .....++..++.+++|+++||+++| + ....+.+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r--------~-~~~~~~~~ 110 (476)
T PLN00028 41 SWISFFTCFVSTFAAAPLLPI-IRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR--------Y-GSAFLLML 110 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------H-HHHHHHHH
Confidence 333344444445555555565 56778999999884 6667778889999999999999864 2 23334444
Q ss_pred hHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 126 PAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
..+..+.....++.+..++ +..++...........+.+.+|+ +||.+.|+.+
T Consensus 111 ~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~~~~~i~~~~~~~~rg~a~g~~~ 165 (476)
T PLN00028 111 TAPAVFCMSLVSSATGFIAVRFFIGFSLATFVSCQYWMSTMFNGKIVGTANGIAA 165 (476)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcChhheeHHHHHHH
Confidence 4444444444445444333 33332222222234456787875 5998888764
No 59
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.06 E-value=2.5e-09 Score=83.25 Aligned_cols=124 Identities=14% Similarity=0.102 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCcccch-hhhhhHHHHHHHHHHHHHHHHH-HHhcCCchhhhHHHH
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSY--LGANSHSLS-FTAMPYVLNSLFCIVAGHFADN-LVSHSWTVLTVRRLM 118 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr-~~~r~~~~~~~r~~~ 118 (179)
.++.+.+..++...++|++..++|.|+++. +|++..+++ +.....+...++.+++|+++|| +++| ..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~---------~~ 81 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK---------KT 81 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH---------HH
Confidence 356777778888899999999999999987 899999999 4777778899999999999999 6653 33
Q ss_pred HHHHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch----hHHHHHHH
Q psy10147 119 TSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN----HAGVTFAI 175 (179)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~----~~g~~~gi 175 (179)
+..+.+...+....+...++.+...+ ...+. .+...+...+...+.+|+ +|+.+.++
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~ 145 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTL 145 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehh
Confidence 44555555555555554444333322 22222 223345567777777753 25555554
No 60
>PRK10504 putative transporter; Provisional
Probab=99.04 E-value=8.5e-09 Score=80.01 Aligned_cols=133 Identities=9% Similarity=0.041 Sum_probs=84.4
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
++++|+.++...+..++..........+.|.|++..+|+++.++++ .....+...++.++.|+++||+++|
T Consensus 256 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-------- 327 (471)
T PRK10504 256 KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-------- 327 (471)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch--------
Confidence 5889999988888888877777777788999999888999998885 4444555667778999999999764
Q ss_pred HHHHHHHhHHhHHHHHHHhhc---chHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 116 RLMTSIGLIGPAVFLIFFCAV---DNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+. ...+.....+....+... ++.+.... ... ...+...+.......+..|++ +|.+.|+.++
T Consensus 328 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 396 (471)
T PRK10504 328 RV-LVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSM 396 (471)
T ss_pred HH-HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHH
Confidence 22 222333332222222221 22221111 222 223333555667777777655 8888887664
No 61
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.03 E-value=1.6e-08 Score=76.79 Aligned_cols=138 Identities=12% Similarity=0.033 Sum_probs=82.4
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.+++++++++.++...+..+........+..+.|.++++.+|+++.+.++ ...+.++..++.++.+++.||.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~---- 273 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL---- 273 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 45677888998887666666666666667778899999989999888774 5555566667777777777776421
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhh--cchHHHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCA--VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
............+....... ..+.+.... +.....+...+...+...+..|+++|++.++.+.
T Consensus 274 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (394)
T PRK11652 274 ----MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGG 341 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 12121222222222211111 112232222 2222233345566777778888888888887763
No 62
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.03 E-value=5.3e-09 Score=80.46 Aligned_cols=125 Identities=17% Similarity=0.245 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+..++.....+.+..++|.+.++ +|+|+.+.+ +.....++..++.+++|+++||+++| ..+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~~~~~ 94 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR---------YFMGIG 94 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc---------hhHHHH
Confidence 4445555555555566778888987665 899999988 47778888999999999999999764 233445
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.+...+..+.....++.+...+ +..+ ..+...+...+.+.+.+|+ +||.+.|+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 154 (434)
T PRK11663 95 LIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNT 154 (434)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5555545554444555544333 2222 2333455667788888876 49999888753
No 63
>PRK10504 putative transporter; Provisional
Probab=99.02 E-value=1.5e-08 Score=78.63 Aligned_cols=126 Identities=17% Similarity=0.223 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+.+|...+..++.....+.+..++|.+.++ +|.++.+.++ .....+...++.+++|+++||+++| +. ..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r--------~~-~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR--------NI-FF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH--------HH-HH
Confidence 456777888888888888888999998865 8999998884 5566677789999999999999865 22 22
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.+...+........++.+..++ +..++ .+...+...+.+.|..|++ ++.+.|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVT 140 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 333333333333333444444333 22222 2233455677788888765 888877664
No 64
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.01 E-value=1.6e-08 Score=82.10 Aligned_cols=85 Identities=13% Similarity=0.068 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--H-HHHHHHhhhhchhhhh
Q psy10147 85 MPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--I-SMGLSAFNSAGFLASH 161 (179)
Q Consensus 85 ~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 161 (179)
+..++..+|.+++|+++||++|| ..+..+.++.++..+.+....+....++ + ..++.+...+..++++
T Consensus 603 l~~l~~i~G~il~g~L~Dr~GRr---------~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~ 673 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDKIGRL---------RMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLT 673 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44467788999999999999854 3344555555555555544443333222 2 2222333456678899
Q ss_pred hhccchh-HHHHHHHhhc
Q psy10147 162 ADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 162 ~~~~~~~-~g~~~gi~~~ 178 (179)
+|.+|.+ ||++.|+.++
T Consensus 674 aEl~Pt~~Rgta~Gi~~~ 691 (742)
T TIGR01299 674 VELYPSDKRATAFGFLNA 691 (742)
T ss_pred HHHcCHHHHHHHHHHHHH
Confidence 9999976 9999998764
No 65
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.01 E-value=3.5e-08 Score=75.04 Aligned_cols=71 Identities=7% Similarity=0.031 Sum_probs=53.8
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHH
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNL 104 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~ 104 (179)
+.++++++|.+|...+..++.....+....+.+.++.+++|+++.+.++ .....++..++.++.+++.||.
T Consensus 208 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~ 279 (394)
T PRK10213 208 NTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS 279 (394)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3567889999998877777777777777777755455678999988884 6666677888888888888874
No 66
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.00 E-value=5.4e-09 Score=80.23 Aligned_cols=135 Identities=14% Similarity=0.139 Sum_probs=83.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.+++++++|.++...+..++.....+....+.+.|.+..++ ++.+.+ +..+..+...++.++.++++||+++|
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~----- 287 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK----- 287 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 46678889999988888888877777777777777766555 444455 45566788889999999999999754
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhc-chHHHHHH---HHHHHHHhhhhchhhhhhhccc--------hhHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAV-DNLLFAVI---ISMGLSAFNSAGFLASHADIAP--------NHAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~gi~~~ 178 (179)
+. ...+.+...+........ ++.+..++ +.....+...+..++...|..+ +++|.+.|+.|+
T Consensus 288 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 361 (437)
T TIGR00792 288 ---IL-FAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTF 361 (437)
T ss_pred ---HH-HHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHH
Confidence 22 223333333333333222 23232222 2222233345556777777643 347888887764
No 67
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.00 E-value=2.7e-08 Score=75.27 Aligned_cols=127 Identities=7% Similarity=-0.017 Sum_probs=84.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMT 119 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~ 119 (179)
++.++...+..+...........++|.|.++ +|.|..+.| ......++..++.++.|+++||+++| ...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k---------~~~ 74 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN---------RSY 74 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---------HHH
Confidence 3557778888888878888888999998875 799999999 47788889999999999999999864 233
Q ss_pred HHHhHHhHHHHHHHhhcchHHHHHH--HHHHHH-Hhhhhchhhhhhhccc-hhHHHHHHHhh
Q psy10147 120 SIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLS-AFNSAGFLASHADIAP-NHAGVTFAISN 177 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~g~~~gi~~ 177 (179)
..+.+...+........++.+..++ +..+.. +...+.......+..+ ++|+.+.|+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (381)
T PRK03633 75 YLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYM 136 (381)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3455555444444444555554433 322222 2223333344455554 45888877654
No 68
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.99 E-value=2.8e-08 Score=75.34 Aligned_cols=73 Identities=11% Similarity=-0.010 Sum_probs=59.0
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhH-HHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPY-VLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~-~~~~ig~~~~g~l~dr~~~r 107 (179)
++++++|+|.++......++..........+.|.|+++ .|+++++.|+ ..... ....++.+++|++.||+++|
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 56788999988888877778777788888899999987 6999999994 44444 46677888999999999764
No 69
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.99 E-value=3.2e-08 Score=75.06 Aligned_cols=74 Identities=5% Similarity=-0.051 Sum_probs=58.1
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
..++.+++++++...+...+.......+..+.|.++++.+|+++.+.+ +.....+...++.++.+++.||+++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~ 269 (392)
T PRK10473 195 ENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR 269 (392)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 345678888887766665555555666778889999998999998888 46677788889999999999999754
No 70
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=5e-09 Score=89.25 Aligned_cols=136 Identities=17% Similarity=0.227 Sum_probs=89.9
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc-cch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSH-SLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~-~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.++.+++++.++...+..++.....+.+..++|.|+++.+|++.. +.+ +.....++..++.+++|+++||++++
T Consensus 224 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~---- 299 (1146)
T PRK08633 224 NLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL---- 299 (1146)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc----
Confidence 466678888888877777777777778889999999999999988 778 46667777888889999998887643
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+ ...++.++..+..+.+....+.+..++ +..+ ..+.......+.+.+..|++ +|++.|+.++
T Consensus 300 ---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~ 365 (1146)
T PRK08633 300 ---G--LVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNF 365 (1146)
T ss_pred ---c--chhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHH
Confidence 1 122233333333333333333333323 2222 22333455677888887765 9998887764
No 71
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.97 E-value=1.8e-08 Score=78.92 Aligned_cols=136 Identities=14% Similarity=0.216 Sum_probs=75.4
Q ss_pred CcHHHHhhc---HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-------------hhhhhHHHHHH
Q psy10147 33 PRWISFISH---WS----LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-------------FTAMPYVLNSL 92 (179)
Q Consensus 33 ~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-------------l~~~~~~~~~i 92 (179)
.++++++++ ++ .+......++....+|+...|.|.++++ .|+++.+++ ...+..++..+
T Consensus 272 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 350 (502)
T TIGR00887 272 ASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVP 350 (502)
T ss_pred hhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 357777753 22 2223334455566778888899999975 688765322 11222345566
Q ss_pred HHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc----ch-HHHHHH-HHHHHHHh-hhhchhhhhhhcc
Q psy10147 93 FCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV----DN-LLFAVI-ISMGLSAF-NSAGFLASHADIA 165 (179)
Q Consensus 93 g~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~-~~~~~~~~-~~~~~~~~~~~~~ 165 (179)
+.+++++++||++|| .....+.++..+....+... .. ....+. +...+.+. ..+..+.+..|.+
T Consensus 351 g~~~~~~l~dr~gRR---------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 421 (502)
T TIGR00887 351 GYWVTVFLVDIIGRK---------PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF 421 (502)
T ss_pred HHHHHHHHhhhhcch---------hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC
Confidence 888999999999865 22222333333222222211 11 111111 22122222 2345677789999
Q ss_pred chh-HHHHHHHhhc
Q psy10147 166 PNH-AGVTFAISNT 178 (179)
Q Consensus 166 ~~~-~g~~~gi~~~ 178 (179)
|.+ |+++.|+.++
T Consensus 422 p~~~R~~~~g~~~~ 435 (502)
T TIGR00887 422 PTRYRSTAHGISAA 435 (502)
T ss_pred chhHHHHHHHHHHH
Confidence 977 9999998774
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.97 E-value=1.1e-08 Score=78.43 Aligned_cols=71 Identities=13% Similarity=0.232 Sum_probs=64.0
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
..++++++|...+..++...+++....++|.|+++++|+|+.+.| ......+...++.++.|+++||+++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r 76 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLK 76 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 356788999999999998888888999999999999999999999 58888899999999999999999865
No 73
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.96 E-value=3.2e-08 Score=80.42 Aligned_cols=107 Identities=15% Similarity=0.044 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchH
Q psy10147 61 IMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNL 139 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 139 (179)
+...+|. +++.+|++..+.+ +.....++.++|.+++|+++||++|| ..+..+.++..+..++....++.
T Consensus 186 is~ilp~-i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR---------~~lii~lil~~i~~ll~afa~s~ 255 (742)
T TIGR01299 186 VGFVLPS-AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK---------QCLLICLSVNGFFAFFSSFVQGY 255 (742)
T ss_pred HHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHHhhH
Confidence 3444554 5667899998888 57778899999999999999999864 22333444444344444444444
Q ss_pred HHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 140 LFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 140 ~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+..++ +.. ...+...+...+++.|..|++ ||...++.+
T Consensus 256 ~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~ 297 (742)
T TIGR01299 256 GFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLC 297 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 44333 222 233344667889999999865 888877654
No 74
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.96 E-value=8.5e-08 Score=73.38 Aligned_cols=129 Identities=7% Similarity=-0.002 Sum_probs=81.7
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYL-GANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
++++++++|+++...+..++......+..++++.|.++.. +.+...++ +.........+|.++++++.||+++|
T Consensus 224 ~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~---- 299 (410)
T TIGR00885 224 SLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH---- 299 (410)
T ss_pred hHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH----
Confidence 4567889999998888888887777788899999997632 33333334 45555677889999999999998653
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHHH-H-HHHHHHHhhhhchhhhhhhccchhHHH
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAV-I-ISMGLSAFNSAGFLASHADIAPNHAGV 171 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~g~ 171 (179)
+.+. ...+...+........++..... + +..++.+..++..++...+..++++..
T Consensus 300 ----~~l~-i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~ 356 (410)
T TIGR00885 300 ----KVLM-AYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKY 356 (410)
T ss_pred ----HHHH-HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 3333 23333333333333333322222 2 333344444677788888877776433
No 75
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.95 E-value=4.4e-08 Score=74.13 Aligned_cols=125 Identities=6% Similarity=0.039 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+...++..+......+......|. +++++|+++.+.+ +.....++..++.++.|+++||++|| + .+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r--------~-~~~~~ 83 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR--------L-PMVTS 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------H-HHHHH
Confidence 445666666666666666677776 5677999999999 57788889999999999999999864 2 23334
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.+...+..+.....++.+..+. +..+ ..+...+...+.+.|..|+ +|+.+.++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 143 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLIS 143 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHH
Confidence 4444444444444445444333 2222 2233455567778888875 48888887653
No 76
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.95 E-value=3.3e-08 Score=75.64 Aligned_cols=125 Identities=11% Similarity=-0.064 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+.+++...-...+.+..| .+++++|++..+.| +.....++..++.+..|+++||+++| ..+..+
T Consensus 10 ~~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r---------~~~~~~ 79 (412)
T TIGR02332 10 IIFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR---------RWIAGI 79 (412)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH---------HHHHHH
Confidence 34444555555555555566666 68888999999999 47788888999999999999999864 233445
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.+...+........++.+..++ +..++ .+...+.....+.|.+|+ +||.+.|+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~ 139 (412)
T TIGR02332 80 MVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMI 139 (412)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 5555545554555555544433 33332 223345556778888876 59999888753
No 77
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.95 E-value=4.5e-08 Score=72.43 Aligned_cols=129 Identities=21% Similarity=0.314 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
|.++...+..++..........+.|.++++.+|.+..+.+ ......++..++.++.++++||+++| ++ ...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~~-~~~ 246 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-------RL-LLL 246 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hH-HHH
Confidence 5566677777777888888899999999998899999888 57778888999999999999999764 21 333
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.+.+...+........++.+.... +.....+...+...+...|..|+ ++++..|+.+.
T Consensus 247 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (352)
T cd06174 247 IGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNT 308 (352)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHH
Confidence 444444444444444444333333 22223334456678888898885 59999888764
No 78
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.95 E-value=6.8e-08 Score=73.43 Aligned_cols=125 Identities=18% Similarity=0.275 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-----h-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHH
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSL-----S-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRR 116 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~-----g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~ 116 (179)
.+...++..++..........++|.|+++ +|++..+. | ...+..+...++.++.|+++||+++| +
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~ 85 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK--------I 85 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH--------H
Confidence 34455566666677777788899998866 78886653 5 36677788899999999999999754 2
Q ss_pred HHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 117 LMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
. +..+.+...+........++.+..++ +..++.+...+.......+..|++ ++.+.|+.+
T Consensus 86 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (408)
T PRK09874 86 M-LLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLS 148 (408)
T ss_pred H-HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhHHhHHHHHHHhcCHhhhhHHHHHHH
Confidence 2 33344444444444444444444333 333332323444556666777654 888877664
No 79
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.94 E-value=3.7e-08 Score=72.59 Aligned_cols=71 Identities=13% Similarity=0.179 Sum_probs=64.0
Q ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 36 ISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
..++|+|.-|...+...+++..+|....|+|.+++|. |+|..++| +..+..+...+.++....+++|..++
T Consensus 202 ~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~ 273 (395)
T COG2807 202 RKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQ 273 (395)
T ss_pred cccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3578999999999999999999999999999999985 99999999 68888889999999999999996543
No 80
>PRK12382 putative transporter; Provisional
Probab=98.94 E-value=2e-08 Score=76.11 Aligned_cols=66 Identities=18% Similarity=0.285 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+.++...+..+............+|.|+++++|+|..+.| +.....+...+++++.|+++||+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r 81 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAK 81 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcch
Confidence 3455566666666666777788899999999999999999 57788889999999999999999865
No 81
>PRK03699 putative transporter; Provisional
Probab=98.94 E-value=5.9e-08 Score=73.76 Aligned_cols=123 Identities=8% Similarity=0.023 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+..++.......+...+|.+ .+++|+|..+.+ ......++..++.+++|+++||+++| ..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i-~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r---------~~~~~~ 78 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPI-AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK---------RQLIFG 78 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---------HHHHHH
Confidence 4555555555555566677778885 556899999988 47778888999999999999999864 233344
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
.+...+........++.+..++ ...+ ..+...+...+.+.+..|++ |+.+.++.
T Consensus 79 ~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 136 (394)
T PRK03699 79 FALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFT 136 (394)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHH
Confidence 4444444444444455544333 2222 23333455667778888754 88776654
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.93 E-value=6e-09 Score=79.78 Aligned_cols=130 Identities=11% Similarity=0.091 Sum_probs=75.1
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYL---GANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSW 109 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~ 109 (179)
+.++++++|++|...+..++....+.....+.|.|+.+.+ +.+..+.+ +..+..+...++.+++|+++||+++|
T Consensus 215 ~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-- 292 (420)
T PRK09528 215 DALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-- 292 (420)
T ss_pred HHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 3556788998877666555555555556667898888764 34445556 46666777889999999999999865
Q ss_pred chhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHH
Q psy10147 110 TVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVT 172 (179)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~ 172 (179)
+. ...+.+...+........++.+..+. +..+ ..+........+..+..|++ +++.
T Consensus 293 ------~~-~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~ 352 (420)
T PRK09528 293 ------NA-LLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATI 352 (420)
T ss_pred ------hh-hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeee
Confidence 22 22333333333333444445553333 2111 22222233445566666554 5544
No 83
>PRK09848 glucuronide transporter; Provisional
Probab=98.93 E-value=1.1e-08 Score=78.90 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=85.3
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhh-HHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMP-YVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~-~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.++++++||.++...+..++.....+....+.|.|+++.+|.+....++...+ .+...++.++.++++||+++|
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~----- 294 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK----- 294 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----
Confidence 47789999999999888888888888888889999999889877655553343 456778889999999998753
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH---HHHHHHHhhhhchhhhhhhccch--------hHHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI---ISMGLSAFNSAGFLASHADIAPN--------HAGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~g~~~gi~~~ 178 (179)
+.+ ..+.+...+....+...+ +.+..+. +.....+...+..++...|..+. +.|...|+.++
T Consensus 295 ---~~~-~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 295 ---NTF-LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred ---HHH-HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 222 233333333222222222 2332222 11112233345567777776642 24777777654
No 84
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.93 E-value=9.9e-08 Score=72.18 Aligned_cols=73 Identities=12% Similarity=0.058 Sum_probs=55.0
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++++++++.++......+...........++|.|+++ .|.++.+++ +.....+...++.+..|+++||+++|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~ 265 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL 265 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH
Confidence 45678888887765544444444455566789999987 599988888 56777788899999999999999753
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.92 E-value=4.2e-09 Score=89.78 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=62.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.++.+.+++.+|...+..++.....+.+..++|.|+++.+|.++.+.| +.....++..+|.++.|+++|+..+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~ 290 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRIT 290 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 466788899999988888888888888899999999999999999988 4777788889999999999876543
No 86
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.91 E-value=2.6e-08 Score=76.54 Aligned_cols=138 Identities=15% Similarity=0.169 Sum_probs=91.4
Q ss_pred CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 32 GPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
+..++++++||.++...+..++............+.|.+...|.+.....+.....+...++.++.++++||+++|
T Consensus 215 ~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~---- 290 (428)
T PF13347_consen 215 RDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK---- 290 (428)
T ss_pred ccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce----
Confidence 4457788999999999999998888888888889999998888874333356677788899999999999999875
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhc--chHHHHHH---HHHHHHHhhhhchhhhhhhccc--------hhHHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAV--DNLLFAVI---ISMGLSAFNSAGFLASHADIAP--------NHAGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~gi~~~ 178 (179)
+ ....+.+...+........ ++.+..++ +.....+......++..+|..+ ++.|...|+.++
T Consensus 291 ---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~ 365 (428)
T PF13347_consen 291 ---K--VYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSF 365 (428)
T ss_pred ---e--ehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhh
Confidence 2 2223333333333333322 34444333 2222334445667888888764 125776666553
No 87
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.90 E-value=6e-08 Score=72.02 Aligned_cols=122 Identities=26% Similarity=0.383 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHh
Q psy10147 48 YIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGP 126 (179)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~ 126 (179)
++..++...........+|.++.+++|.++.+.+ +.....+...++.++.|+++||+++| + ....+.+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~l~~~~~~~ 72 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR--------R-VLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH--------H-HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe--------e-eEeehhhhh
Confidence 3455566666666777888678888999999999 47778889999999999999999764 3 444455555
Q ss_pred HHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 127 AVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.+......+.++.+..++ +..+. .+...+...+.+.|..|+ +|+.+.++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 128 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSA 128 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHH
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccc
Confidence 544233333344443333 33333 245567788889999887 59888887653
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.90 E-value=5e-09 Score=84.12 Aligned_cols=74 Identities=12% Similarity=0.167 Sum_probs=64.5
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHH-HHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYV-LNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~-~~~ig~~~~g~l~dr~~~r 107 (179)
.++++++||.++...+..++.....+++.+|+|.|+++++|+++.+++ +..+..+ +..+|.+++|+++||++.+
T Consensus 322 ~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 322 IIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 466789999999999999999999999999999999999999999999 4555444 5678999999999998644
No 89
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.90 E-value=2.6e-08 Score=75.76 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=79.2
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
++.+++++.+........+...........+|.|+++.+|+++.+.|+ .....++..+++++.+++.||.+++
T Consensus 198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~------ 271 (393)
T PRK11195 198 CRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL------ 271 (393)
T ss_pred HHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc------
Confidence 456778887665555544445555666777888999999999999884 6666677778888887777764432
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh--HHHHHHHhhc
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH--AGVTFAISNT 178 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~--~g~~~gi~~~ 178 (179)
+. ...+... +.....+...++.+.... +..+ ..+.......+..++..|++ +|.+.|+.|+
T Consensus 272 --~~-~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~ 337 (393)
T PRK11195 272 --RV-LPAGILM-GLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNF 337 (393)
T ss_pred --ch-HHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhH
Confidence 12 2223222 222222232333333222 2222 22333445667777776664 6888887764
No 90
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.89 E-value=7.5e-08 Score=73.74 Aligned_cols=124 Identities=12% Similarity=0.113 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+....+..+......+......|. +++++|.++.+.+ ......++..++.++.|+++||+++| ..+..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r---------~~l~~~ 89 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK---------PLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHH
Confidence 445555555555555555556665 5677899999988 47778889999999999999999764 334445
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+...+........++.+..++ ...++ .+...+.....+.|..|++ |+.+.++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 148 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLV 148 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHH
Confidence 5555555544444555544444 32222 2334555677788888765 888877654
No 91
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.88 E-value=7.1e-08 Score=74.97 Aligned_cols=137 Identities=13% Similarity=0.093 Sum_probs=92.1
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.+|++.++|....+.+.+++..-+..++......|.++++|++..+.. +..+..+.+.+|++++|++.||++.|
T Consensus 273 t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k----- 347 (477)
T PF11700_consen 273 TFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK----- 347 (477)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----
Confidence 344556678899999999999999999999999999999999999877 46677788999999999999999854
Q ss_pred hhHHHHHHHHhHHh-HHHHHHHh-----h--cchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 113 TVRRLMTSIGLIGP-AVFLIFFC-----A--VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 113 ~~r~~~~~~~~~~~-~~~~~~~~-----~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
++......++.. .+....+. . .++.+...+ +.....|...+..-++..++.|+. .+.-.|+.+
T Consensus 348 --~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~ 422 (477)
T PF11700_consen 348 --TKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYA 422 (477)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence 112222222222 11111111 0 223332222 222334444666788888888865 676666654
No 92
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.88 E-value=1.3e-07 Score=71.98 Aligned_cols=122 Identities=7% Similarity=0.017 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLI 124 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~ 124 (179)
...+..++.....|.....+|.+. +++|+++.+.+ ......+...++.++.|+++||++|| ..+..+.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr---------~~~~~~~~ 93 (394)
T PRK10213 24 SVAFCVACLIIVEFLPVSLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR---------YVVILFAV 93 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH---------HHHHHHHH
Confidence 334444444445555566677754 56899999999 47777888889999999999999764 33334444
Q ss_pred HhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 125 GPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..++..+.....++.+..++ +..+ ..+...+...+.+.|..|++ ++.+.++..
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~ 150 (394)
T PRK10213 94 LLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIF 150 (394)
T ss_pred HHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHH
Confidence 44444444444555554444 3333 23334566777888888754 888887764
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.87 E-value=1.1e-07 Score=73.01 Aligned_cols=133 Identities=12% Similarity=0.132 Sum_probs=82.5
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------ccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANS--------HSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~--------~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
.++++|+|+++...+..++..........+.|.|+++ .|.++ ...+ ...+..+...++.+..|+++||++
T Consensus 201 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 201 AFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred HHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4578889998887777777666666666788888876 46554 3345 355666777888899999999997
Q ss_pred hcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc-hH---HHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 106 SHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD-NL---LFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 106 ~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+| ..+..+.+...+....+.... +. +..++ +..+ ..+...+.....+.|..|++ +|++.|+.+
T Consensus 280 ~r---------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~ 350 (418)
T TIGR00889 280 IK---------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFT 350 (418)
T ss_pred cH---------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 53 333344444444433333222 11 21111 1121 22233445567778888865 999988875
No 94
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.87 E-value=3e-08 Score=75.31 Aligned_cols=67 Identities=21% Similarity=0.286 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
++++....+..+............+|.++++++|.|+.+.| ......++..++.++.|+++||+++|
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r 81 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPK 81 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCc
Confidence 35566677777777777777888999999999999999999 47888899999999999999999875
No 95
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.86 E-value=1.5e-07 Score=70.28 Aligned_cols=131 Identities=11% Similarity=0.102 Sum_probs=94.6
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
...+++++|.++...+..+++-...-....|++.|+.+..|++..++. +....+++.++|..++.++..|+..
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~------ 301 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP------ 301 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH------
Confidence 467899999999999999999999999999999999998888988888 5788889999999999888887743
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccchhHHHHH
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPNHAGVTF 173 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 173 (179)
.|.+...+ +...+.++.....++.+.... +...+.+..++...+...+..|++...+.
T Consensus 302 --~k~Laf~a-~~~ill~~~~~l~~g~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s 361 (422)
T COG0738 302 --EKYLAFYA-LIAILLLLAVALIGGVVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGS 361 (422)
T ss_pred --HHHHHHHH-HHHHHHHHHHHHhcChHHHHHHHHHHHHhHHHHHHHHHHHHhccCccccccc
Confidence 34444333 333333444444555443333 44445566677777777777776644443
No 96
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.86 E-value=1.2e-07 Score=72.30 Aligned_cols=75 Identities=9% Similarity=0.088 Sum_probs=55.1
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhh-HHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMP-YVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~-~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++++++++|.++...+..++..........+.+.++.+++|+++.+.++ .... .++..++.+++|++.||+++|
T Consensus 200 ~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~ 276 (402)
T PRK11902 200 GPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY 276 (402)
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 35778899999887777666655544444455666788888999988884 4343 345788999999999999754
No 97
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.85 E-value=6.2e-08 Score=76.08 Aligned_cols=136 Identities=18% Similarity=0.183 Sum_probs=84.4
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.++-+.++|.+....+..++.+.....+...+|.+.++.+|.++...| +.....++..+|.++.+++.+|+.++
T Consensus 210 G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~----- 284 (524)
T PF05977_consen 210 GLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR----- 284 (524)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----
Confidence 344455567766665555555555556677799999999999988877 46666666667666666665554321
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH-HH-HH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI-IS-MG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
+ +...+.+..++.++.+...++.+.... +. .| ..........+..+...|++ +|.+.++.++
T Consensus 285 ---~-lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~ 350 (524)
T PF05977_consen 285 ---R-LVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQM 350 (524)
T ss_pred ---h-hhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHH
Confidence 2 223344444555555566666555444 21 12 22233445677888888887 9999988764
No 98
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.85 E-value=1.2e-07 Score=71.72 Aligned_cols=71 Identities=14% Similarity=0.237 Sum_probs=56.9
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+.++++..|...+..++.....+....+.|.|+++.+|+++.+.+ +.....++..++.++.|++.||+++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~ 265 (382)
T PRK10091 194 HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL 265 (382)
T ss_pred HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch
Confidence 466788888776666666666666677888889888899999888 46777788999999999999998754
No 99
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.85 E-value=7e-08 Score=73.88 Aligned_cols=69 Identities=4% Similarity=-0.018 Sum_probs=54.1
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHH
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFA 101 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~ 101 (179)
.+++++++||.+|...+..++.....+.+..+.|.++++.+|+++.+.++ ......+..++..+.+++.
T Consensus 209 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~ 278 (413)
T PRK15403 209 RDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFV 278 (413)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35778899999999888888888888888899999999999999999885 4444555556555555543
No 100
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.85 E-value=8.7e-08 Score=72.82 Aligned_cols=67 Identities=13% Similarity=0.233 Sum_probs=61.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
||.+|.+....++...++..+..++|.|+++++|+++.+.| ......+...++.+..|+++||++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr 68 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK 68 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 57889999999999999999999999999999999999999 58888999999999999999999865
No 101
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.85 E-value=6.4e-08 Score=72.14 Aligned_cols=121 Identities=18% Similarity=0.166 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIG 125 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~ 125 (179)
..+..+....+.......+|.|..+ .+.++.+.+ +.....++..++.++.|+++||++|| +. +..+.+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r--------~~-~~~~~~~ 73 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK--------KV-MIGADLI 73 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh--------HH-HHHHHHH
Confidence 4455566666666677788887766 688988888 47778888999999999999999864 22 2233333
Q ss_pred hHHHHHHHhhcc-----hHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 126 PAVFLIFFCAVD-----NLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 126 ~~~~~~~~~~~~-----~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..+......... +.+..++ +.. ...+...+...+...|..|++ |+.+.|+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (365)
T TIGR00900 74 RAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQ 134 (365)
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHH
Confidence 222222222222 4443333 222 233344566788889988764 888887765
No 102
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.84 E-value=1.7e-07 Score=71.54 Aligned_cols=135 Identities=12% Similarity=0.072 Sum_probs=74.8
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHH-HHhcCCch
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADN-LVSHSWTV 111 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr-~~~r~~~~ 111 (179)
++++++++++++...+..+...........++|.|+++..+ ++.+.+ +.....++...+....+++.|| ...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~----- 273 (400)
T PRK11646 200 GMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRL----- 273 (400)
T ss_pred HHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----
Confidence 57788899988766655555444444456789999988655 666667 4555555554444444555544 321
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
++. ...+.+...+....+...++.+..+. ...+ ..+...+...+.+.+..|+ ++|++.|+.++
T Consensus 274 ---~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~ 340 (400)
T PRK11646 274 ---EHR-LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRL 340 (400)
T ss_pred ---hHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHH
Confidence 222 22333333333333334444433322 1121 2223345567778888875 49999888764
No 103
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.84 E-value=4.4e-08 Score=74.94 Aligned_cols=135 Identities=14% Similarity=0.111 Sum_probs=84.1
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.+++.+.+++.++...+..++...+.......+|.+.++ ++.++.+.|+ .....+...++.++.|+++||+++|...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l- 85 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI- 85 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE-
Confidence 355555678888887777777777777778888988766 5778888884 7777888899999999999999876221
Q ss_pred hhhHHHHHHHHhHHhHHHHHH-----HhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIF-----FCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..+.+..++.... +...++.+...+ +..++ .+...+...+...+..|++ ++.+.++.+
T Consensus 86 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (417)
T PRK10489 86 --------LLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITM 152 (417)
T ss_pred --------EehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHH
Confidence 1111111111111 111223333322 22222 2333455567777877654 788777654
No 104
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.84 E-value=5.5e-08 Score=76.01 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHH-HHhcCCchhhhHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADN-LVSHSWTVLTVRRLMT 119 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr-~~~r~~~~~~~r~~~~ 119 (179)
+.+|..++..++...++|++..+++.|+++.+|++..++. ..........+..+++|+++|| +++| ...
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r---------~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK---------RTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH---------HHH
Confidence 3467778888889999999999999999999999998877 3555566677777899999999 7754 233
Q ss_pred HHHhHHhHHHHHHHhhcchHHH-HHH---HHHHHHHhhhhchhhhhhhccch
Q psy10147 120 SIGLIGPAVFLIFFCAVDNLLF-AVI---ISMGLSAFNSAGFLASHADIAPN 167 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~ 167 (179)
..+.+...+..+......+... .++ +.....+...+...+.+.|.+|+
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~ 136 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPP 136 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCC
Confidence 3444444444443333332222 212 21122233455667888888864
No 105
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.84 E-value=6.8e-08 Score=73.41 Aligned_cols=74 Identities=12% Similarity=0.241 Sum_probs=55.7
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYL---GANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++++++|+++|...+..++....+.....+.|.|+++.+ +.+....| +..+..+...++.+..|++.||+++|
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~ 284 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK 284 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5778999999887777666665666667778899998875 34444556 46666777888889999999999865
No 106
>TIGR00895 2A0115 benzoate transport.
Probab=98.84 E-value=1e-07 Score=71.83 Aligned_cols=122 Identities=12% Similarity=0.104 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIG 125 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~ 125 (179)
..+..+......+......|.+. +++|+++.+.+ +.....++..++.++.|+++||+++| .....+.+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~ 91 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK---------RVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH---------HHHHHHHHH
Confidence 33344444444555556667654 55899999888 47777788899999999999999854 233334444
Q ss_pred hHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 126 PAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
..+........++.+..++ +..+ ..+...+...+.+.|..|++ |+.+.|+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 148 (398)
T TIGR00895 92 FSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFC 148 (398)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhh
Confidence 4444444444444443333 2222 22334566788888988765 8888877653
No 107
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.84 E-value=2.6e-08 Score=74.49 Aligned_cols=116 Identities=15% Similarity=0.153 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHH
Q psy10147 52 FAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFL 130 (179)
Q Consensus 52 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~ 130 (179)
.+.....|....+.|. +++++|+|..+.+ ......++..++.+..|+++||++|| .....+.+...+..
T Consensus 13 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r---------~~~~~~~~~~~~~~ 82 (377)
T TIGR00890 13 CFTSGYVYTWTLLAPP-LGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR---------AVAMLGGILYGLGF 82 (377)
T ss_pred HHHhhHHhhhhhHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc---------chhHHhHHHHHHHH
Confidence 3333446666666666 5667899999999 58888899999999999999999875 22233444444444
Q ss_pred HHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 131 IFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 131 ~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
......++.+..++ ...+ ..+...........+..|++|+.+.++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (377)
T TIGR00890 83 TFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIII 132 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHH
Confidence 44444445444433 2111 12222333445566666777888887765
No 108
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.83 E-value=3.1e-08 Score=76.35 Aligned_cols=128 Identities=12% Similarity=0.111 Sum_probs=76.0
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHH
Q psy10147 40 SHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLM 118 (179)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~ 118 (179)
+++.++...+...+.......+..+.|. +++ .|+++.+.+ ......++..++.++.|+++||+++| + .
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~--------~-~ 93 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPY-LVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR--------V-F 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHH-HHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc--------e-e
Confidence 3444555555555555555556667775 455 499999999 47788889999999999999999865 1 2
Q ss_pred HHHHhHHhHHHHHHHhhc----chHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 119 TSIGLIGPAVFLIFFCAV----DNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
...+.+...+..+..... .+.+...+ ...+ ..+...+.....+.|.+|+ +||.+.|+.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~ 161 (438)
T TIGR00712 94 LPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNC 161 (438)
T ss_pred hHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHH
Confidence 223333333333322221 22222222 2222 2233344456677788865 59999888663
No 109
>PRK03545 putative arabinose transporter; Provisional
Probab=98.83 E-value=7.6e-08 Score=73.00 Aligned_cols=124 Identities=10% Similarity=0.092 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+..+......+.....+|. +.+++|.++.+.|+ .....++..++.+..|+++||+++| ..+..+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~ 80 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR---------KLLIGL 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH---------HHHHHH
Confidence 344444444444444444455676 56679999999994 6777778888999999999999864 334445
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHHH-Hhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGLS-AFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.+...+..+.....++.+..++ +..+.. +...+...+...+..|+ +|+.+.|+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~ 139 (390)
T PRK03545 81 FVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLA 139 (390)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHH
Confidence 5555545454555566655544 333332 23345566777888765 5998888754
No 110
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.83 E-value=1.1e-07 Score=72.03 Aligned_cols=125 Identities=10% Similarity=0.015 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+.++...+..++.....+.....+|.+ ++++|++..+.+ ......++..++.++.|+++||+++| ..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK---------HILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH---------HHHH
Confidence 446667777777777777788888885 566899999988 57888899999999999999999754 3334
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHh
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAIS 176 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~ 176 (179)
.+.+..++..+.....++.+..++ ...++ .+...+.......+..|+ +++.+.++.
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGM 132 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHH
Confidence 455555555555555566555444 32222 222334445666777765 477666653
No 111
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.83 E-value=1.2e-07 Score=73.32 Aligned_cols=106 Identities=14% Similarity=0.183 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc---
Q psy10147 61 IMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV--- 136 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--- 136 (179)
+...+|. +++. |+++.+.++ .....++..++.+++|+++||+++| ..+..+.++.++........
T Consensus 48 ~~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k---------~~l~~~~~~~~i~~~~~~~~~~~ 116 (452)
T PRK11273 48 FALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR---------VFLPAGLILAAAVMLFMGFVPWA 116 (452)
T ss_pred HHHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc---------hhHHHHHHHHHHHHHHHHhhhcc
Confidence 4456664 6666 999999994 7778888999999999999999865 23333444443333333322
Q ss_pred -chHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 137 -DNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 137 -~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.+..+. ...+ ..+...+.....+.+.+|++ |+.+.|+.+
T Consensus 117 ~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~ 162 (452)
T PRK11273 117 TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWN 162 (452)
T ss_pred cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHH
Confidence 12322222 2222 22333444456667777654 999888764
No 112
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.82 E-value=5.8e-08 Score=75.81 Aligned_cols=110 Identities=16% Similarity=0.166 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhh-c-
Q psy10147 60 IIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCA-V- 136 (179)
Q Consensus 60 ~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~- 136 (179)
....++|.|+++.+|+++.+++ +.....++..++.+++|+++||+++| +... .+.+...+..+.... .
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~--------~~~~-~~~~~~~~~~~~~~~~~~ 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR--------KAYV-CSLLISQLLIIPVFAIGG 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HHHH-HHHHHHHHHHHHHhhccc
Confidence 3567899999888999999988 57777788999999999999999754 2222 233222222222211 1
Q ss_pred chHHHHHH--HHHHHHH-hhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 137 DNLLFAVI--ISMGLSA-FNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 137 ~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+.+.... ...+..+ .......+...+..|++ +|++.|+.++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 409 (496)
T PRK03893 364 ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYN 409 (496)
T ss_pred cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhh
Confidence 22222111 1111122 22344566778888765 8988887654
No 113
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.81 E-value=2.9e-07 Score=71.89 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+...++..+......+.....+|. +.+++|+|+.+.+ +.....++..++.++.|+++||+++| + ....+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~-~~~~~ 91 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTE-VQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR--------L-AMVIS 91 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH--------H-HHHHH
Confidence 344455555555555555556666 5567899999888 57777888899999999999999764 2 33344
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+..++..+.....++.+...+ +..++ .+...+.....+.|..|++ ++.+.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 150 (496)
T PRK03893 92 IVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLI 150 (496)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 4444444444444444444333 22222 2333555677788888765 888877664
No 114
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.81 E-value=8.9e-08 Score=72.11 Aligned_cols=121 Identities=12% Similarity=0.035 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIG 125 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~ 125 (179)
..+..+.............|. +++++|.|+.+.+ ......++..++.++.|+++||+++| +. ...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r--------~~-~~~~~~~ 79 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR--------PV-LLLGLFI 79 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh--------HH-HHHHHHH
Confidence 333333334444445555666 4566899999999 47778888999999999999999764 22 3334444
Q ss_pred hHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 126 PAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..+..+.....++.+...+ +..+ ..+...+...+.+.|..|++ |+.+.|+.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (385)
T TIGR00710 80 FALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILM 135 (385)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4444444444455444333 2222 22333555678888888754 888888765
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.81 E-value=2.1e-07 Score=70.87 Aligned_cols=124 Identities=8% Similarity=0.053 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+....+..++.....+......|.+. +++|+++.+.+ +.....++..++.++.|+++||+++| +. ...+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--------~~-~~~~ 86 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMA-QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK--------RI-LIVS 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc--------hh-HHHH
Confidence 33444555555555666666777755 55899999999 47778888999999999999999865 22 2233
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.+...+..+.....++.+..++ +..+. .+...+...+.+.|..|+ +|+.+.++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 145 (406)
T PRK11551 87 VALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMY 145 (406)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 3333333333334445544433 33232 233455567888888875 5999888765
No 116
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.79 E-value=1.9e-07 Score=71.14 Aligned_cols=126 Identities=15% Similarity=0.103 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+.+....++.++...+.+....++|.+++ ++|+++.+.++ .....+...++.+++|+++||+++| +. +.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k--------~~-l~ 82 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL--------KT-MM 82 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH--------HH-HH
Confidence 44566677777777777777778898885 47999999994 7777788899999999999999864 22 22
Q ss_pred HHhHHhHHHHHHH---hhc-chHHHHHH--HHHHH-HHhhhhchhhhhhhccc-hhHHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFF---CAV-DNLLFAVI--ISMGL-SAFNSAGFLASHADIAP-NHAGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~---~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~gi~~ 177 (179)
.+.....+..... ... .+.+..+. ...+. .+.......+...+..| ++|+.+.|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 147 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFW 147 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3333333322221 222 23333222 22221 12223334455666654 55999988765
No 117
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.78 E-value=3.8e-07 Score=70.96 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLI 124 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~ 124 (179)
.+.+..+............+|.+. +++|.++.+.+ ......++..++.++.|+++||+++| .....+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~ 75 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIA-GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLISTF 75 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHHH
Confidence 344444455455555666777755 55899999888 47778888999999999999999754 33334555
Q ss_pred HhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 125 GPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
...+........++.+..++ ...++ .+...+...+.+.|..|+ +|+.+.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 132 (485)
T TIGR00711 76 AFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWG 132 (485)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 55545554555555554444 33332 333456678888898875 4998888764
No 118
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.78 E-value=1.1e-06 Score=66.89 Aligned_cols=116 Identities=12% Similarity=0.092 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHH
Q psy10147 51 HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVF 129 (179)
Q Consensus 51 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~ 129 (179)
..+..........|+|.|+++ .|++ +.+ ......++..++.++.|++.||+++| +. ...+.....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~--------~~-~~~~~~~~~~~ 292 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGL--------RV-AIVSLLVEILG 292 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccH--------HH-HHHHHHHHHHH
Confidence 334445566677889998876 4663 345 34556677788899999999998653 22 22333333333
Q ss_pred HHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 130 LIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.......++.+..++ +..+ ..+...+.......+..|++ +|++.|+.+.
T Consensus 293 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 345 (399)
T PRK05122 293 LLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSV 345 (399)
T ss_pred HHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 333333444433322 2222 12223334445566766654 9999988764
No 119
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.77 E-value=1.2e-07 Score=71.19 Aligned_cols=59 Identities=8% Similarity=0.072 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 49 IAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 49 ~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+..++...+.......+|.|+++++|.|..+.|+ ...+.+...+..++.|+++||+++|
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r 63 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDR 63 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 4456666777778889999999999999999994 7777788888999999999999865
No 120
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=2.5e-07 Score=70.37 Aligned_cols=113 Identities=15% Similarity=0.080 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHH--HHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHH
Q psy10147 54 MNWSTYIIMQWLPTY--MSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFL 130 (179)
Q Consensus 54 ~~~~~~~~~~~~p~~--l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~ 130 (179)
.....++...+.|.+ +++++|.++.+.+ ...+..++..++.+++|+++||+++| + .+..+.+...+..
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r--------~-~~~~~~~~~~~~~ 85 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK--------P-VLLAGLSLFALGS 85 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc--------H-HHHHHHHHHHHHH
Confidence 334444455555654 6677899999999 47788888999999999999999865 2 2333443443334
Q ss_pred HHHhhcchHHHHHH--HHHHHH-Hhhhhchhhhhhhccchh-HHHHHHH
Q psy10147 131 IFFCAVDNLLFAVI--ISMGLS-AFNSAGFLASHADIAPNH-AGVTFAI 175 (179)
Q Consensus 131 ~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~-~g~~~gi 175 (179)
......++.+..++ +..+.. +.......+...|..|++ ++.+.+.
T Consensus 86 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (401)
T PRK11043 86 LGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFAT 134 (401)
T ss_pred HHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33444444444333 222221 222334456677777654 5544443
No 121
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.77 E-value=7.8e-08 Score=72.03 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
+++|...+......+.++.+....+. +.+++|+|+.|.+ +.++|.+.+.+..+.-|.+.||++-| ++..
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~-i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR--------~~~~- 83 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVF-IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR--------KWTI- 83 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch--------HHHH-
Confidence 34555555555555555555444444 5688999999999 58999999999999999999999854 3333
Q ss_pred HHhHHhHHHHHHHhhcc---hHHHHHH--HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFFCAVD---NLLFAVI--ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
++.+...+..+.+.+.. +.+..+. +..++.|..++...+++..-+|++ .|.+.|+..
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc
Confidence 34444444444443332 2233333 666667777777888889989876 999999874
No 122
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.76 E-value=1.7e-08 Score=75.54 Aligned_cols=117 Identities=15% Similarity=0.118 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHH
Q psy10147 51 HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVF 129 (179)
Q Consensus 51 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~ 129 (179)
+++.......+....|. +++++|+++.+.+ +.....++..++.++.|+++||+++| ..+..+.+...+.
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~ 73 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR---------VFLPIGLILCAIV 73 (379)
T ss_pred hhHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe---------ehhHHHHHHHHHH
Confidence 34444555556666775 6677999999999 47788889999999999999999865 2233444444444
Q ss_pred HHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 130 LIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.....++.+..++ +..+ ..+...+...+.+.|..|++ |+.+.|+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 125 (379)
T TIGR00881 74 NLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWN 125 (379)
T ss_pred HHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehh
Confidence 444444445444433 2222 23344566778888888764 877766554
No 123
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.76 E-value=3.4e-07 Score=69.46 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+....+..+....+.......+|.+. +++|.+..+.+ ......++..++.++.|+++||++|| ..+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~~~ 74 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIA-ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK---------PVAIPG 74 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh---------HHHHHH
Confidence 34444455555566666667788865 45899998888 46777788889999999999999764 233344
Q ss_pred hHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.+...+........++.+..+. +..+. .+......++.+.|..|+ +|+.+.++.+
T Consensus 75 ~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 133 (392)
T PRK10473 75 AALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLN 133 (392)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 4444444444444444443333 22222 223344567788888865 4888877765
No 124
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.74 E-value=1.1e-07 Score=70.33 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLI 124 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~ 124 (179)
...+..++.....+......|.+.++ +|.++.+.+ ......+...++.++.|+++||++|| + ....+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r--------~-~~~~~~~ 72 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRR--------R-VLLLGLL 72 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCc--------h-hhHHHHH
Confidence 44556667777778888888998765 699998888 47788889999999999999999865 2 3334554
Q ss_pred HhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 125 GPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
...+........++.+.... +..+ ..+...+...+...|..|+ +|+...++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (352)
T cd06174 73 LFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFS 129 (352)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHH
Confidence 54444444444444444333 2222 2233456678888888876 5888887765
No 125
>KOG2504|consensus
Probab=98.74 E-value=3.5e-07 Score=71.67 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=96.3
Q ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q psy10147 36 ISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTV 114 (179)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~ 114 (179)
+++++++.++...+...+...+++....++|.|.. ..|++..++. +..+..+...++.++.|+++|+...+
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~------- 363 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR------- 363 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-------
Confidence 47899999999999999999999999999999988 5799999988 68888899999999999999997533
Q ss_pred HHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHH-hhhhchhhhhhhccch-hHHHHHHHh
Q psy10147 115 RRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSA-FNSAGFLASHADIAPN-HAGVTFAIS 176 (179)
Q Consensus 115 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~-~~g~~~gi~ 176 (179)
++....++++..++..+......+.+..+. +.+++.. ...+.....+.|..+. +-..+.|+.
T Consensus 364 ~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~ 429 (509)
T KOG2504|consen 364 ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLL 429 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHH
Confidence 445555666666666655555655544444 3333322 3233344577777653 355555543
No 126
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.72 E-value=2.9e-07 Score=70.07 Aligned_cols=125 Identities=10% Similarity=-0.024 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
|.++..++..++...+.......+|.+ .+++|.++.+.++ .....+...+..+++|+++||++|| | .+.
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-------~--vl~ 72 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-------R--VMF 72 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-------h--hhH
Confidence 456666666666666555555556655 4567888877774 6677788899999999999999876 2 222
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+.+..++..+......+. .+. +.....+...+...+.+.|..|++ ++.+.|+.++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~--~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~ 131 (393)
T PRK11195 73 IANGIKLLGCLLMLFGIHP--LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEG 131 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 2333222222222222222 222 222233445677788999999865 9999888653
No 127
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.72 E-value=5.2e-07 Score=67.93 Aligned_cols=127 Identities=14% Similarity=0.074 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
..++.+.++.|+.....+.....+|..- +++|.|..++| +...+..+..++.++...+.||+.|| ..+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA-~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr---------~lLl 82 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIA-ADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR---------RLLL 82 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH---------HHHH
Confidence 3467888999999999999999999955 55899999999 57778889999999999999999764 2333
Q ss_pred HHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 121 IGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.......+.-......++.+..++ +.....+..++...+.+.++.|+ +|+.+.|++++
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~ 144 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFT 144 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHH
Confidence 333333334444445566666666 44445666788889999999876 49999988753
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.71 E-value=2.5e-07 Score=70.33 Aligned_cols=110 Identities=12% Similarity=0.049 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc
Q psy10147 58 TYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV 136 (179)
Q Consensus 58 ~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 136 (179)
.+.+...+|. +++++|+|..+.+ ....+.++..++.++.|+++||+++| ..+..+....++........
T Consensus 25 ~~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r---------~~l~~~~~l~~~~~~~~~~a 94 (393)
T PRK09705 25 LTSVGPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER---------RSVAISLLLIAVGALMRELY 94 (393)
T ss_pred hhccchhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHC
Confidence 3556677787 5667999999999 47888889999999999999999864 34445666666666666666
Q ss_pred chHHHHHH--HHHH-HHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 137 DNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 137 ~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
++.+..++ +..+ ..+.........+.+.+|++|+.+.|+.+
T Consensus 95 ~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 138 (393)
T PRK09705 95 PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWS 138 (393)
T ss_pred cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHH
Confidence 66665444 2222 23333444566677777877888877653
No 129
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.70 E-value=1.4e-07 Score=70.84 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc
Q psy10147 58 TYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV 136 (179)
Q Consensus 58 ~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 136 (179)
.+.+....|. +++++|+++.+.+ ......++..++.++.|+++||+++|. ....+.+...+........
T Consensus 10 ~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~---------~~~~~~~~~~~~~~~~~~~ 79 (399)
T TIGR00893 10 RANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK---------TLAVFIVIWGVFTGLQAFA 79 (399)
T ss_pred HHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce---------eeHHHHHHHHHHHHHHHHH
Confidence 3444455555 6777999999999 477888999999999999999998652 1223333333333333444
Q ss_pred chHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 137 DNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 137 ~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
++.+..++ +..+ ..+...+.....+.|..|++ |+.+.++.+.
T Consensus 80 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 125 (399)
T TIGR00893 80 GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNS 125 (399)
T ss_pred cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44444433 2222 23344556778888988754 9998887653
No 130
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.70 E-value=3.4e-07 Score=69.16 Aligned_cols=114 Identities=10% Similarity=-0.056 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHH
Q psy10147 54 MNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIF 132 (179)
Q Consensus 54 ~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~ 132 (179)
....+..+...+|.+ ++++|+|+.+.| +.....++..++.+..|+++||++|| +. ....+.........
T Consensus 3 ~~~~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr--------~~-~~~~~~~~~~~~~~ 72 (368)
T TIGR00903 3 SQAIWVTFSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR--------WF-LFGSLATFAAAAGR 72 (368)
T ss_pred hhHHHHHHHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch--------HH-HHHHHHHHHHHHHH
Confidence 345677777888885 556899999999 47777888999999999999999854 22 22222222222211
Q ss_pred HhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 133 FCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
....++.+..++ +..+..............|..|+ +|+.+.++.+
T Consensus 73 ~~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~ 120 (368)
T TIGR00903 73 LLDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLS 120 (368)
T ss_pred HHHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 122134443333 33332221223334445676664 5999988765
No 131
>PRK10133 L-fucose transporter; Provisional
Probab=98.67 E-value=1.4e-06 Score=67.26 Aligned_cols=122 Identities=11% Similarity=0.070 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+....+..+.............|.+ ++.+|.|+.+.|+ .....++..++.++.|+++||+++| ..+..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r---------~~l~~g 97 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK---------AGIITG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHH
Confidence 3445555555556666677788885 8889999999994 7777889999999999999999864 333344
Q ss_pred hHHhHHHHHHH---hhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHH
Q psy10147 123 LIGPAVFLIFF---CAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAI 175 (179)
Q Consensus 123 ~~~~~~~~~~~---~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi 175 (179)
.....+..+.. ...++.+..++ +..+ ..+.......+.+.+..|++ ++...++
T Consensus 98 ~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~ 157 (438)
T PRK10133 98 LFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNL 157 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHH
Confidence 44444444332 22344443333 2222 23334445566666766655 4434444
No 132
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.67 E-value=2e-07 Score=54.19 Aligned_cols=60 Identities=18% Similarity=0.249 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.-..+++...+...+..|+|.|+++ .|+|+.+.| +.++......++.+++|+++||.+++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4455667777888889999999987 799999999 58888889999999999999999875
No 133
>KOG1330|consensus
Probab=98.66 E-value=1.6e-07 Score=71.20 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
...+.+++....+=-|++-.-++- .++.+|.++...| +.....+...++.|++|+++||++|+ .++..|
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~---------~v~~vG 104 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK---------RVIAVG 104 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc---------eEEeeH
Confidence 445556666666666666555554 6778999999999 58888899999999999999999865 223333
Q ss_pred hHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
..+=.+..+...+....|..++ +....-+.+.+..++.+.|.+|+. |+.+.++.++
T Consensus 105 ~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~ 164 (493)
T KOG1330|consen 105 IFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYF 164 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhh
Confidence 3332333333333444555544 222223345777899999999876 9999999875
No 134
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.66 E-value=7.3e-07 Score=67.68 Aligned_cols=122 Identities=9% Similarity=0.029 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
+...+...+...........+|.+. +++|+|+.+.+ ......+...++.++.|+++||++|| + .+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr--------~-~~~~~~ 80 (394)
T PRK11652 11 FMLVLLVAVGQMAQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR--------P-VILVGM 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh--------H-HHHHHH
Confidence 3344444444444444555667655 56899999999 47778888999999999999999864 2 233344
Q ss_pred HHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHh
Q psy10147 124 IGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAIS 176 (179)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~ 176 (179)
+...+..+.....++.+..++ +..++ .+...........|..++ +++.+.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (394)
T PRK11652 81 SIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLL 137 (394)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 444444443344444443333 22222 122233344555666654 466665554
No 135
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.66 E-value=6.9e-07 Score=68.85 Aligned_cols=125 Identities=20% Similarity=0.209 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+..+........+..+.|.++++ +|++..+++ +.....++..++.+++|+++||+++| +. ...+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--------~~-~~~~ 355 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR--------PL-LLIG 355 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--------HH-HHHH
Confidence 3444444444444445566777776654 699987777 46677788899999999999999764 22 2223
Q ss_pred hHHhHHHHHHHh---h--cch-----HHHHHH---HHHHHHHhh-hhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 123 LIGPAVFLIFFC---A--VDN-----LLFAVI---ISMGLSAFN-SAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 123 ~~~~~~~~~~~~---~--~~~-----~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+...+....+. . .+. .+..+. +..+..+.. .+..+....|..|++ +|++.|+.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 426 (481)
T TIGR00879 356 AAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVA 426 (481)
T ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHH
Confidence 333332222222 1 111 121112 222222222 344567778888865 9999888764
No 136
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.66 E-value=1.5e-06 Score=67.05 Aligned_cols=110 Identities=6% Similarity=0.031 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHhCCCccc-ch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc
Q psy10147 60 IIMQWLPTYMSSYLGANSHS-LS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD 137 (179)
Q Consensus 60 ~~~~~~p~~l~~~~g~~~~~-~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 137 (179)
....+...++.+++|++..+ .| .......+..+..+.+|+++||++.| + ++..+++.-.+..+++.+.+
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K--------~-vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK--------P-VLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch--------H-HHHHHHHHHHHHHHHHHHHH
Confidence 34445555788899999999 88 57778888999999999999999753 3 33344444444555555554
Q ss_pred hHHHHHH--HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 138 NLLFAVI--ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 138 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
+.....+ +..|..-.....+..++..-+|+ +|+.++|+.+.
T Consensus 114 Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~s 157 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRA 157 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 4444333 44443332222677788887875 49999988763
No 137
>PTZ00207 hypothetical protein; Provisional
Probab=98.65 E-value=1.5e-06 Score=69.16 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHH
Q psy10147 53 AMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLI 131 (179)
Q Consensus 53 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~ 131 (179)
......|++..+.|. +++++|+|..+.+ +..+. .....+.+.+|+++||+++| ..+.++.+...++.+
T Consensus 38 ~~~g~~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R---------~vllig~ll~~iG~l 106 (591)
T PTZ00207 38 ICTSFMYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPR---------PIFVLSMTVFCLGTL 106 (591)
T ss_pred HHHHHHHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHH
Confidence 334566777777776 5778999998877 34332 23335566789999999753 344455555555554
Q ss_pred HHhhc------chHHHHHH--HHHHH-HHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 132 FFCAV------DNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 132 ~~~~~------~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
..... .+.+...+ ...+. .+.........+.+.+|++||.+.|+..+
T Consensus 107 l~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~ 162 (591)
T PTZ00207 107 LFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKT 162 (591)
T ss_pred HHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHH
Confidence 44433 23443333 22221 22223345566777889889999988754
No 138
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.63 E-value=1.6e-06 Score=66.37 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
++...+..+............+|. +++++|++..++| +.....++..++.+..|++.||+++| .....+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~-~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r---------~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQ-FQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK---------AGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHH
Confidence 344444444444444444466666 5788999999999 47788889999999999999999864 333445
Q ss_pred hHHhHHHHHHHhh---cchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCA---VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+..++....+.. .++.+..+. +.....+.......+.+.+..|++ ++...++.+
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQ 136 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHH
Confidence 5554444443322 223333333 222223333444556666666644 666665543
No 139
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.63 E-value=1.5e-06 Score=67.48 Aligned_cols=110 Identities=9% Similarity=0.059 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc
Q psy10147 59 YIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD 137 (179)
Q Consensus 59 ~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 137 (179)
+.+..++|.+ ++++|++..+.++ .....+...++.+++|+++||+++| + .+..+.+...+..+.....+
T Consensus 36 ~~~~~~~~~i-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r--------~-~l~~~~~~~~~~~~~~~~~~ 105 (455)
T TIGR00892 36 KAVTVFFKEL-QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR--------P-VVIAGGLLASLGMILASFSS 105 (455)
T ss_pred cchhhhHHHH-HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch--------H-HHHhhHHHHHHHHHHHHHhh
Confidence 3455567764 4568999999884 6666677788899999999999865 2 23334444444444444444
Q ss_pred hHHHHHH---HHHHH-HHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 138 NLLFAVI---ISMGL-SAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 138 ~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+.+.... +..++ .+.........+.+.++++|+.+.|+.++
T Consensus 106 ~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~ 150 (455)
T TIGR00892 106 NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMA 150 (455)
T ss_pred hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHh
Confidence 4443322 11121 12222334556667778779999888764
No 140
>TIGR00898 2A0119 cation transport protein.
Probab=98.62 E-value=8.8e-07 Score=69.43 Aligned_cols=134 Identities=10% Similarity=0.023 Sum_probs=72.4
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
.++++++++|.++...+.......... +.++...+..+.++.+... ...+..+...++.++++++.||++||
T Consensus 314 ~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~l~dr~grr----- 385 (505)
T TIGR00898 314 YSFLDLFRTPNLRKTTLCLMMLWFTTA-FSYYGLVLDLGNLGGNIYL--DLFISGLVELPAKLITLLLIDRLGRR----- 385 (505)
T ss_pred CcHHHHhCChHHHHHHHHHHHHHHHHH-HHHHHHhccccccCCChHH--HHHHHHHHHHHHHHHHHHHHHHhCCH-----
Confidence 467889998887665554433322222 2222222222233444221 13344566778888999999999754
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhcchH--HHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAVDNL--LFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.....+.+..++..+.+...++. +..+. ++.+..+......+.+..|.+|.+ |+++.|+.++
T Consensus 386 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~ 453 (505)
T TIGR00898 386 ----YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCST 453 (505)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHH
Confidence 22333444444343333333222 22222 222333344556788889999876 9998887764
No 141
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.61 E-value=1.7e-07 Score=70.48 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIG 122 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~ 122 (179)
+....+.+.+++..--.+..-.|. ++++.++|..|.| +....++...++..+.|.++||.+.| .++.++
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~~g 100 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeehHH
Confidence 344445555555555555555565 6677789999999 58888899999999999999998743 456678
Q ss_pred hHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 123 LIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
++.+++..+.+.+.++.+...+ +-..+-+...+....++..-+|+ +||+..|+=|
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn 159 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWN 159 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEeh
Confidence 8888888877777765554333 22334445566677777777775 4998766544
No 142
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.61 E-value=1.5e-06 Score=66.23 Aligned_cols=108 Identities=10% Similarity=-0.026 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc
Q psy10147 59 YIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD 137 (179)
Q Consensus 59 ~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 137 (179)
..+...+|. +.+++|.|+.+.+ ......++..++.++.|+++||+++| +. +..+.+...+........+
T Consensus 30 ~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r--------~~-l~~~~~~~~~~~~~~~~~~ 99 (406)
T PRK15402 30 DMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR--------PV-MLAGVAFFILTCLAILLAQ 99 (406)
T ss_pred hhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh--------HH-HHHHHHHHHHHHHHHHHHc
Confidence 334445555 4467899998888 46777788899999999999999764 22 3334444444444344444
Q ss_pred hHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 138 NLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 138 ~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+.+..+. +..+ ..+...+..++.+.|..|++ ++.+.++.
T Consensus 100 ~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 142 (406)
T PRK15402 100 SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALM 142 (406)
T ss_pred cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHH
Confidence 4443333 2222 22233345567777777654 55555543
No 143
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.61 E-value=2.8e-07 Score=71.62 Aligned_cols=107 Identities=15% Similarity=0.103 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHh-----
Q psy10147 61 IMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFC----- 134 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~----- 134 (179)
+....|. +++++|++..+.| +.....++..++.+++|+++||+++| ..+..+.+..++..+...
T Consensus 48 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 48 FKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK---------QFLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred hhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc---------chHHHHHHHHHHHHHHHHHHHhc
Confidence 4445676 5567899999999 47778888999999999999999865 222223222222222211
Q ss_pred hcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 135 AVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 135 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
..++.+..++ +..+ ..+...+.....+.+.+|+ +||.+.|+.+
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~ 164 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWN 164 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeee
Confidence 1234443333 2222 2234455667788888875 4888877654
No 144
>PRK12382 putative transporter; Provisional
Probab=98.59 E-value=3.7e-06 Score=63.82 Aligned_cols=114 Identities=13% Similarity=0.101 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHH
Q psy10147 53 AMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLI 131 (179)
Q Consensus 53 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~ 131 (179)
+..........+.|.|+++ .|++. .++ .....++..++.++.|++.||+++| + .. ..+.....+...
T Consensus 227 l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~-~~-~~~~~~~~~~~~ 294 (392)
T PRK12382 227 LQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGV-------K-VA-IVSLLVETVGLL 294 (392)
T ss_pred HHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------e-eh-HHHHHHHHHHHH
Confidence 3345566677888998876 46653 453 4444566778889999999998764 1 11 122223222333
Q ss_pred HHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccc-hhHHHHHHHhhc
Q psy10147 132 FFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAP-NHAGVTFAISNT 178 (179)
Q Consensus 132 ~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~-~~~g~~~gi~~~ 178 (179)
.....++.+..+. +..+ ..+...+...+...+..| +++|++.|+.++
T Consensus 295 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 345 (392)
T PRK12382 295 LLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAA 345 (392)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3333344333322 2222 222334445566677776 459999998764
No 145
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.58 E-value=2.2e-06 Score=65.24 Aligned_cols=66 Identities=12% Similarity=0.093 Sum_probs=51.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhH-HHHHHHHHHHHHHHHHHHhc
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPY-VLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~-~~~~ig~~~~g~l~dr~~~r 107 (179)
|.+.+...+..++...+...+...+|.|+++++|.|+.+.|+ ..... .....+.+.+++ +||+++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r 81 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDR 81 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccch
Confidence 556777777788888888888999999999999999999994 44444 445555666666 9999875
No 146
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.55 E-value=2.4e-06 Score=66.45 Aligned_cols=111 Identities=20% Similarity=0.241 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhh-
Q psy10147 58 TYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCA- 135 (179)
Q Consensus 58 ~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~- 135 (179)
.+...++.|.++++ .|++...+++ .....+...++.+++|+++||+++| .....+.+...+....+..
T Consensus 287 ~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r---------~~~i~~~~~~~v~~~~l~~~ 356 (479)
T PRK10077 287 INVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK---------PLQIIGALGMAIGMFSLGTA 356 (479)
T ss_pred hhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh---------HHHHHhHHHHHHHHHHHHHH
Confidence 44556677887655 7888776664 5556678889999999999999754 2233344333333332211
Q ss_pred --cchHH-HHHH-HHHH--HHHh-hhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 136 --VDNLL-FAVI-ISMG--LSAF-NSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 136 --~~~~~-~~~~-~~~~--~~~~-~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+... .... +... ..+. ..+..+..+.|.+|++ ||++.|+.+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~ 407 (479)
T PRK10077 357 FYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVA 407 (479)
T ss_pred HhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHH
Confidence 11111 1111 1111 1111 2345788999999865 9999987653
No 147
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.55 E-value=1.8e-06 Score=66.24 Aligned_cols=106 Identities=9% Similarity=-0.033 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHH
Q psy10147 62 MQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLL 140 (179)
Q Consensus 62 ~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (179)
..-+|. +.+++|.+..+.+ ...+..++..++.+.+|+++||++|| ..+..+.+...+........++.+
T Consensus 36 ~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a~~~~ 105 (413)
T PRK15403 36 QPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLFTTSMT 105 (413)
T ss_pred ccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHHcCCHH
Confidence 334444 4567899988888 47777888999999999999999865 233334444444444444455554
Q ss_pred HHHH--HHHHHH-Hhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 141 FAVI--ISMGLS-AFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 141 ~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..++ +..+.. +......++...|..|++ ++.+.++.+
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIIT 146 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4444 333322 222334456777887754 666666543
No 148
>PRK09669 putative symporter YagG; Provisional
Probab=98.53 E-value=1.3e-06 Score=67.51 Aligned_cols=74 Identities=5% Similarity=-0.024 Sum_probs=47.2
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+++++++|+.++...+..++............+.|.+...+ ++...+ +.....+...++.+++++++||+++|
T Consensus 220 ~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~ 294 (444)
T PRK09669 220 KDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV 294 (444)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 356788899998888777776655555444444444443333 222222 34444566778888999999999764
No 149
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.53 E-value=1e-06 Score=66.34 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc
Q psy10147 59 YIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD 137 (179)
Q Consensus 59 ~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 137 (179)
......+|.+.++ +|+++.+.+ +.....++..++.+++|+++||++|| ..+..+.+...+........+
T Consensus 8 ~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~~~ 77 (377)
T PRK11102 8 DMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACALAQ 77 (377)
T ss_pred HHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHHHc
Confidence 3445677887654 899999999 47778888999999999999999754 233445555444444444444
Q ss_pred hHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 138 NLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 138 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+.+.... +..++ .+.......+...|..|++ |+.+.++.+
T Consensus 78 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (377)
T PRK11102 78 TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVT 121 (377)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 4443333 22222 2333455677888888755 888887764
No 150
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.53 E-value=1.1e-06 Score=66.81 Aligned_cols=69 Identities=14% Similarity=0.239 Sum_probs=58.9
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 39 ISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+++.+|......++....+-....+.|.+++++.|+|.++.| +.....+...+.+++.|.++||++.|
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~k 73 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLK 73 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTC
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhh
Confidence 3577899999999999898888999999999998899999999 57788888999999999999999865
No 151
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.53 E-value=9.8e-07 Score=67.11 Aligned_cols=132 Identities=18% Similarity=0.154 Sum_probs=68.1
Q ss_pred HHhhcHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---ch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 37 SFISHWSLWSVY-IAHFAMNWSTYIIMQWLPTYMSSYLGANSHS---LS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 37 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~---~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
+.+++++++... ...+........+..++|.|+.+..+..... .+ +..++.++..++.+..|+++||+++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~---- 288 (408)
T PRK09874 213 TSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE---- 288 (408)
T ss_pred HhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence 455667665433 3333344445556678888888764432221 23 24445667778888999999999764
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
+. ...+.....+....+...++.+...+ +..+ ..+...+...+...+..|+ ++|...++.+
T Consensus 289 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (408)
T PRK09874 289 ----KI-LITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQ 353 (408)
T ss_pred ----hh-HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHH
Confidence 22 22233333333333333333333322 2222 2223344455555565554 4676666543
No 152
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.53 E-value=2.5e-06 Score=65.10 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHH-----HhcCCchhhhHHHHHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNL-----VSHSWTVLTVRRLMTS 120 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~-----~~r~~~~~~~r~~~~~ 120 (179)
....++.+.........-+|.|++++ |+|.++.|+ ..+... .+..+++|+++||+ +|| |++ +.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r-------r~~-l~ 72 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR-------RGW-LL 72 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc-------hhH-HH
Confidence 34556667777777888999999986 999999994 333332 58889999999999 443 333 33
Q ss_pred HHhHHhHHHHHHHhhc---chHHHHHH--HHH-HHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFFCAV---DNLLFAVI--ISM-GLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~---~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.+..++....+... .+.+.... +.. .+.....+...+.+.|..|++ |+.+.++..
T Consensus 73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~ 136 (402)
T PRK11902 73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKV 136 (402)
T ss_pred HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHH
Confidence 3444443333333332 22332222 111 222333556788888888765 888777643
No 153
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.52 E-value=5.7e-07 Score=70.09 Aligned_cols=127 Identities=13% Similarity=0.160 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
+...+..+..+..+..+..|++.|+++.+|+++...| +..+.-+.-++..|+.|+++||...|++. ||.++..+.
T Consensus 9 ~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Gr----rrp~il~g~ 84 (473)
T PRK10429 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGK----FKPWILIGT 84 (473)
T ss_pred HhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCC----cchhHhhhh
Confidence 3555566666677777889999999999999999999 57778888999999999999976443332 234444555
Q ss_pred HHhHHHHHHHhhcc---hH---HHHHH--HHH-HHHHhhhhchhhhhhhcc--chhHHHHHHH
Q psy10147 124 IGPAVFLIFFCAVD---NL---LFAVI--ISM-GLSAFNSAGFLASHADIA--PNHAGVTFAI 175 (179)
Q Consensus 124 ~~~~~~~~~~~~~~---~~---~~~~~--~~~-~~~~~~~~~~~~~~~~~~--~~~~g~~~gi 175 (179)
+..++....+...+ .. ...++ +.. ....+....+.+...|+. +++|...++.
T Consensus 85 i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~ 147 (473)
T PRK10429 85 LANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPY 147 (473)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHH
Confidence 55554443333222 11 11111 111 222333555777888876 3446665544
No 154
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.52 E-value=7.2e-06 Score=64.35 Aligned_cols=123 Identities=10% Similarity=0.070 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
....+..+....-...+..-+|.+. +++|.+..+.+ ......++..++.+.+|+++||+++| ..+..+.
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~-~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk---------~~l~~~~ 78 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLS-MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK---------RLLMLGG 78 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHH
Confidence 3445555555555555666788865 55899988877 46667777888889999999999764 3344455
Q ss_pred HHhHHHHHHHhhcchHHHHHH--HHHHHH-Hhhhhchhhhhhhcc-c-hhHHHHHHHhh
Q psy10147 124 IGPAVFLIFFCAVDNLLFAVI--ISMGLS-AFNSAGFLASHADIA-P-NHAGVTFAISN 177 (179)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~-~-~~~g~~~gi~~ 177 (179)
+...+..+.....++.+..++ ...++. +...+.....+.+.. | ++|+.+.|+..
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~ 137 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWA 137 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 555555555555566655544 333322 222333444454543 4 45888877754
No 155
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.51 E-value=1.9e-07 Score=71.67 Aligned_cols=121 Identities=18% Similarity=0.288 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHH
Q psy10147 52 FAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFL 130 (179)
Q Consensus 52 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~ 130 (179)
+.....+.....+++.|+++.+|+++.++| ...+..+...+..|+.|+++||.++|.+. ||..+..+.+..++..
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Gr----rr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGK----FRPWLLIGAIPFSIVL 84 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCC----cchhHHHhHHHHHHHH
Confidence 344555666778899999999999999999 47778889999999999999997655332 3444444544444444
Q ss_pred HHHhhcch------HHHHHH--HHHH-HHHhhhhchhhhhhhcc--chhHHHHHHHh
Q psy10147 131 IFFCAVDN------LLFAVI--ISMG-LSAFNSAGFLASHADIA--PNHAGVTFAIS 176 (179)
Q Consensus 131 ~~~~~~~~------~~~~~~--~~~~-~~~~~~~~~~~~~~~~~--~~~~g~~~gi~ 176 (179)
+.+...++ .+..+. +... ..+.....+.+...|.. +++|+...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~ 141 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFR 141 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHH
Confidence 33333221 111111 1111 12222344566777765 34577766653
No 156
>PRK09669 putative symporter YagG; Provisional
Probab=98.51 E-value=3.9e-07 Score=70.40 Aligned_cols=125 Identities=13% Similarity=0.107 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLI 124 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~ 124 (179)
...+..+..+..+..+..|++.|+++++|+++.++| +..+.-+...+..|+.|+++||.+.|++. ||..+..+.+
T Consensus 13 ~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Gr----rrp~il~~~~ 88 (444)
T PRK09669 13 GYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQ----FRPYLLWFAI 88 (444)
T ss_pred hhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCC----cchhHHHHHH
Confidence 444555555566667788999999999999999999 47777888999999999999997655433 2344444443
Q ss_pred HhHHHHHHHhhcch------HHHHHH--HHHH-HHHhhhhchhhhhhhccc--hhHHHHHH
Q psy10147 125 GPAVFLIFFCAVDN------LLFAVI--ISMG-LSAFNSAGFLASHADIAP--NHAGVTFA 174 (179)
Q Consensus 125 ~~~~~~~~~~~~~~------~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~--~~~g~~~g 174 (179)
..++........++ .+...+ +... ........+.+...|+.+ ++|....+
T Consensus 89 ~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~ 149 (444)
T PRK09669 89 PFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQS 149 (444)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHH
Confidence 33333332222221 111111 1221 222334456777777763 44665433
No 157
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.50 E-value=1.9e-06 Score=66.40 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=55.8
Q ss_pred cccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc---chHHHHHH--HHHH-H
Q psy10147 77 SHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV---DNLLFAVI--ISMG-L 149 (179)
Q Consensus 77 ~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~-~ 149 (179)
..+.+ +.....++..++.+++|+++||++|| +. +..+.++..+..+..... .+.+..++ +..+ .
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 140 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK--------KS-LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIG 140 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH--------HH-HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Confidence 67777 47788889999999999999999864 22 333333333333333221 12222222 2222 2
Q ss_pred HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 150 SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.+...+...+++.|..|+ +|+.+.++.+
T Consensus 141 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~ 169 (481)
T TIGR00879 141 VGIASALVPMYLSEIAPKALRGALTSLYQ 169 (481)
T ss_pred hhHHHhHHHHHHHccCChhhhhhhhhHHH
Confidence 333455567888898875 4888888765
No 158
>KOG0569|consensus
Probab=98.49 E-value=6.8e-07 Score=69.17 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=83.0
Q ss_pred CCCcHHHHhhcHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHH
Q psy10147 31 NGPRWISFISHWSLW-----SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNL 104 (179)
Q Consensus 31 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~ 104 (179)
.+.++++++++++.. .+.+...-+..+.+...+|...++.+ .|+++.++.+ .....+...+.++++.++.||+
T Consensus 254 ~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~ 332 (485)
T KOG0569|consen 254 KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL 332 (485)
T ss_pred cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456788999876543 23333344455666677777777766 5999988874 7777888999999999999999
Q ss_pred HhcCCchhhhHHHHHHHHhHHhHHHHHHHh----hcc-h-HHHHH---H-HHHH--HHHhh-hhchhhhhhhccchh-HH
Q psy10147 105 VSHSWTVLTVRRLMTSIGLIGPAVFLIFFC----AVD-N-LLFAV---I-ISMG--LSAFN-SAGFLASHADIAPNH-AG 170 (179)
Q Consensus 105 ~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~-~-~~~~~---~-~~~~--~~~~~-~~~~~~~~~~~~~~~-~g 170 (179)
+|| .+++.+..+..+..+.+. ... . .|... . +... .++.. .+.-|-..+|++|+. |.
T Consensus 333 gRR---------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~ 403 (485)
T KOG0569|consen 333 GRR---------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARS 403 (485)
T ss_pred CCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchH
Confidence 875 233333333322222211 111 1 22221 2 2221 22222 445788999999875 88
Q ss_pred HHHHHhh
Q psy10147 171 VTFAISN 177 (179)
Q Consensus 171 ~~~gi~~ 177 (179)
++.++..
T Consensus 404 aa~s~~~ 410 (485)
T KOG0569|consen 404 AAQSVAT 410 (485)
T ss_pred HHHHHHH
Confidence 8776654
No 159
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.48 E-value=1.5e-06 Score=67.81 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=51.0
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++.+++|+.++...+..++.....+....+.+.|.+...+ +....+ +.....+...++.++.++++||+++|
T Consensus 223 ~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk 296 (473)
T PRK10429 223 IVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRR 296 (473)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 34456688888888888888777777777777765554433 444444 34444567788889999999999864
No 160
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.48 E-value=2.3e-06 Score=66.51 Aligned_cols=122 Identities=15% Similarity=0.096 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHH----HHhcCCchhhhHHHHHH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADN----LVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr----~~~r~~~~~~~r~~~~~ 120 (179)
......+.....+.....+++.|+++ +|.++...+ ......+.+.+..++.|+++|| +||| +.++.
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--------rp~il 78 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--------RPFIA 78 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--------HHHHH
Confidence 44444444455666667788887754 899998888 4677778899999999999995 6654 34444
Q ss_pred HHhHHhHHHHHHHhhcchH--------------HH-HHH-HHH----HHHHhhhhchhhhhhhccchh---HHHHHHHh
Q psy10147 121 IGLIGPAVFLIFFCAVDNL--------------LF-AVI-ISM----GLSAFNSAGFLASHADIAPNH---AGVTFAIS 176 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~--------------~~-~~~-~~~----~~~~~~~~~~~~~~~~~~~~~---~g~~~gi~ 176 (179)
.+.+...+.+..+.+.++. +. ... +++ .......+...+.+.|..|++ ++.+.++.
T Consensus 79 ~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~ 157 (477)
T TIGR01301 79 AGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHH
Confidence 4455554444444443221 11 111 111 233344666788999999743 35666654
No 161
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.48 E-value=2.2e-06 Score=64.61 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=90.1
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.++|++.+++.+....++.+...=+..+.......|-.+.+|++..+..+ .....+..++|++++|++.||++.|
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k---- 318 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK---- 318 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----
Confidence 34666777888899999999999999999999999999999999999884 6677789999999999999999754
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHH-HH--HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFA-VI--ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+.. ..+++...+..+........... +. +.....|...+..-++.....|++ .+.-.|+.+
T Consensus 319 ---~vl--~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglya 383 (438)
T COG2270 319 ---PVL--MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYA 383 (438)
T ss_pred ---eee--hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhh
Confidence 112 22332222222222222212111 11 222222333555677777877754 666555554
No 162
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.48 E-value=1.4e-05 Score=61.15 Aligned_cols=134 Identities=16% Similarity=0.238 Sum_probs=78.7
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
..+++|+|+++...+..++.....-.+.+|.+.|+++.-|++....+ +..+..+.-.+.....+++..|++.
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~------- 272 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGI------- 272 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-------
Confidence 34799999998888888888788888889999999986447666656 3333333334444445555444432
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhc-chHHHHH-H--HHHHHHHh----hhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAV-DNLLFAV-I--ISMGLSAF----NSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~----~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+.++.++.+..++=...+... ++.+... + +...+.|. .......++.+..|++ ++++-|+.+
T Consensus 273 --~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~ 343 (400)
T PF03825_consen 273 --KWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYS 343 (400)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHH
Confidence 233444554444333334444 3333222 2 32233333 3444566777777876 788777664
No 163
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.46 E-value=2.9e-06 Score=72.71 Aligned_cols=133 Identities=10% Similarity=0.090 Sum_probs=78.3
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--chh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS--LSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~--~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
.+++++.++.+++..++...........+..++.+.++.+... .++ ..+..+...++.+++|+++||++||
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------ 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------ 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence 3566777777777777766666555555555666666665433 343 5566777889999999999999864
Q ss_pred hHHHHHHHHhHHhHHHHH---HHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 114 VRRLMTSIGLIGPAVFLI---FFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
..+..+.++..+..+ ......+.+..++ +..+ ..+...+...+++.|..|++ ++.+.|+.++
T Consensus 78 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 146 (1146)
T PRK08633 78 ---RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEA 146 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHH
Confidence 222223222211111 1112233333333 2222 33344566778889988754 8888887653
No 164
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.45 E-value=6e-06 Score=65.60 Aligned_cols=127 Identities=16% Similarity=0.214 Sum_probs=75.3
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q psy10147 39 ISHWSLWSVYIAHFAMNWSTYII----MQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTV 114 (179)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~ 114 (179)
+++++++......++.....|.. ..-+| +..++.|-++..+.+.....+...++.++.|+++|.+|||
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~-~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr------- 108 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILP-YINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR------- 108 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-------
Confidence 34566665554444333333322 23334 4445567665444456666788899999999999999854
Q ss_pred HHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 115 RRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 115 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
.+.+.+.++..++.+.-..+++....+. ...+. .+. .......+.|+.|.+ |+.+.++.
T Consensus 109 --~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~-~~~~~~~isEl~p~k~R~~~~~~~ 171 (599)
T PF06609_consen 109 --YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGV-QELAALAISELVPNKWRGLGLAIA 171 (599)
T ss_pred --HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHH-HHHHHHHHHHhcccchhhhHhHHH
Confidence 5566677777777776666666555444 11121 222 223455678888755 77766544
No 165
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.45 E-value=3e-06 Score=65.24 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=88.2
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
+..+++|+++....+..++...+..........|.+..+|.+.....+ .........++.++...+++|+++|
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk------ 302 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK------ 302 (467)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH------
Confidence 346778999988888888888888888888888888888888777764 4444455566688999999999864
Q ss_pred hHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH---HHHHHHHhhhhchhhhhhhccc--------hhHHHHHHHhh
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI---ISMGLSAFNSAGFLASHADIAP--------NHAGVTFAISN 177 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~gi~~ 177 (179)
+. ...+.++..+....+.+.+ +.+..++ +.....+...+..|++++|... +..|...|+++
T Consensus 303 --~~-~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t 376 (467)
T COG2211 303 --KL-FLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT 376 (467)
T ss_pred --HH-HHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH
Confidence 22 3334444444444443333 3333333 3334445557778999999763 22566666554
No 166
>PRK09848 glucuronide transporter; Provisional
Probab=98.43 E-value=2e-06 Score=66.56 Aligned_cols=64 Identities=14% Similarity=0.215 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcC
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
+...+..+..+........+++.|+++..|+++.++| +..+..+...+..++.|+++||.++|.
T Consensus 11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~ 75 (448)
T PRK09848 11 VGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRW 75 (448)
T ss_pred HhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCC
Confidence 3455555555666666777888899999999999999 477778889999999999999986653
No 167
>PRK11462 putative transporter; Provisional
Probab=98.43 E-value=2.8e-06 Score=66.05 Aligned_cols=127 Identities=11% Similarity=0.033 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLI 124 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~ 124 (179)
...+..+..+..+..+..|++.|+.+..|+++..+| +..+.-+.-++..|+.|+++||...|.+. ||.++.++.+
T Consensus 13 ~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr----~rp~il~g~i 88 (460)
T PRK11462 13 GYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK----FRPWVLFGAL 88 (460)
T ss_pred hhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC----cchhHhHHHH
Confidence 455555556666777788999999999999999999 57777788899999999999987655443 4445555544
Q ss_pred HhHHHHHHHhhcch------H-HHHHH-H-HHHHHHhhhhchhhhhhhccc--hhHHHHHHHh
Q psy10147 125 GPAVFLIFFCAVDN------L-LFAVI-I-SMGLSAFNSAGFLASHADIAP--NHAGVTFAIS 176 (179)
Q Consensus 125 ~~~~~~~~~~~~~~------~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~--~~~g~~~gi~ 176 (179)
..++....+...+. . +..+. + ......+...++.+...|+.+ ++|...+++-
T Consensus 89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r 151 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWR 151 (460)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHH
Confidence 44444443332221 1 11111 2 122233335567888888875 4577776643
No 168
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.41 E-value=2.1e-05 Score=60.67 Aligned_cols=118 Identities=10% Similarity=0.076 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC---CCcccc---h-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q psy10147 49 IAHFAMNWSTYIIMQWLPTYMSSYLG---ANSHSL---S-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSI 121 (179)
Q Consensus 49 ~~~~~~~~~~~~~~~~~p~~l~~~~g---~~~~~~---g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~ 121 (179)
+..++...-...+....| ++.++++ .+..+. + .....+++..+|.+++|+++||++|| ..+..
T Consensus 29 ~~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr---------~~l~~ 98 (432)
T PRK10406 29 SGNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK---------KSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH---------HHHHH
Confidence 334444444444333444 5666664 444332 2 23445566679999999999999864 33444
Q ss_pred HhHHhHHHHHHHhhcchHH--------HHH-H-HHHHH-HHhhhhchhhhhhhccch-hHHHHHHHh
Q psy10147 122 GLIGPAVFLIFFCAVDNLL--------FAV-I-ISMGL-SAFNSAGFLASHADIAPN-HAGVTFAIS 176 (179)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~--------~~~-~-~~~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~ 176 (179)
+.+..++........++.. ..+ . +..++ .+...+...+++.|..|+ +||...++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~ 165 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQ 165 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHH
Confidence 5555544444443333221 122 2 33332 233466678889998875 488776653
No 169
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.41 E-value=1.2e-05 Score=63.19 Aligned_cols=131 Identities=16% Similarity=0.086 Sum_probs=81.0
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHH-----HhcCCch
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNL-----VSHSWTV 111 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~-----~~r~~~~ 111 (179)
+..++++.+...+.++......+.....+|.++++. |.|..+.+....... ..++.+++|.++||+ +||
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~~-~~~~~~l~gpl~Dr~~~~~~Grr---- 80 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVGQ-AYVFKFLWSPLMDRYTPPFLGRR---- 80 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHH-HHHHHHHHHHHHHcccccCCCCc----
Confidence 345667777888888888888888888999998874 899888884211111 126789999999998 543
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhc---chHHHHHH---HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAV---DNLLFAVI---ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
|.+ +..+.+...+........ .+.+.... +...+.+.......++..|..|+ +||.+.++.+
T Consensus 81 ---r~~-ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~ 149 (491)
T PRK11010 81 ---RGW-LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISV 149 (491)
T ss_pred ---hHH-HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHH
Confidence 333 333444443333322222 23333222 22223333455577888898874 5888777654
No 170
>KOG3626|consensus
Probab=98.41 E-value=1.6e-06 Score=69.77 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=62.7
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhh-hHHHHHHHHHHHHHHHHHHH
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAM-PYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~-~~~~~~ig~~~~g~l~dr~~ 105 (179)
..+++++||.+....+...+......++.+|+|-|+++++|.++..+. ++.. ...+..+|.+++|++..|+.
T Consensus 384 s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 384 SIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 466788999999999999999999999999999999999999999988 5444 44567789999999988874
No 171
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.40 E-value=3.6e-06 Score=63.00 Aligned_cols=106 Identities=17% Similarity=0.187 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchH
Q psy10147 61 IMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNL 139 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 139 (179)
....+|. +++++|+|+.+.+ ....+.++..++.++.|+++||+++| +. +..+.+...+..... ..++.
T Consensus 19 ~~~~lp~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r--------~~-~~~~~~~~~~~~~~~-~~~~~ 87 (355)
T TIGR00896 19 VGPLLPQ-IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE--------RS-VAAGLLLIAAGILIR-SAPGT 87 (355)
T ss_pred CcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch--------HH-HHHHHHHHHHHHHHH-HhccH
Confidence 3456677 4556899999999 48888899999999999999999865 22 223333333333322 33444
Q ss_pred HHHHH--HHHHH-HHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 140 LFAVI--ISMGL-SAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 140 ~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
+..++ +..++ .+.........+.+..|++++.+.++.+
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYS 128 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHH
Confidence 43333 22222 2222334455667777777888877764
No 172
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.40 E-value=2e-05 Score=61.80 Aligned_cols=122 Identities=8% Similarity=0.088 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----ch-h--hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS----LS-F--TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLM 118 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~g-l--~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~ 118 (179)
...+..++...-+..+....| ++.+.++.+..+ .+ + ....+++..+|.+++|+++||+||| ..
T Consensus 20 ~~~~g~~~~~~d~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr---------~~ 89 (490)
T PRK10642 20 AASLGNAMEWFDFGVYGFVAY-ALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQ---------KI 89 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH---------HH
Confidence 334444444333333344444 566666543322 12 1 2445577889999999999999864 33
Q ss_pred HHHHhHHhHHHHHHHhhcchHHH--------HHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 119 TSIGLIGPAVFLIFFCAVDNLLF--------AVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
+..+.++.++..+.....++... .++ +..+ ..+...+...+++.|.+|+ +||...++.+
T Consensus 90 l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~ 160 (490)
T PRK10642 90 LAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLD 160 (490)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHH
Confidence 44555555555555555554321 122 3322 2334456678889999875 4888766543
No 173
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.39 E-value=1.2e-05 Score=61.53 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+...++.+...+..+..++|.|+++ .|+|..|.| +.+...+...++.++.|.++||..++
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~ 67 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSA 67 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhH
Confidence 4445555566666678889999988 589999999 68888899999999999999998653
No 174
>PRK09952 shikimate transporter; Provisional
Probab=98.39 E-value=2.2e-05 Score=60.67 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcccchhh-----hhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHH
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYL--GANSHSLSFT-----AMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRL 117 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--g~~~~~~gl~-----~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~ 117 (179)
+...+..++...-...+....|.++.+.+ +.++.+..+. ...+++..+|.++.|+++||++|| .
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr---------~ 95 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK---------R 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH---------H
Confidence 33444444444444444445566666554 6666532222 233455678888899999999864 3
Q ss_pred HHHHHhHHhHHHHHHHhhcchHHH--------HHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 118 MTSIGLIGPAVFLIFFCAVDNLLF--------AVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
.+..+.+...+........++... .++ ...++ .+...+....++.|..|++ ||...+..
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~ 166 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGV 166 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 344455555555555555554331 111 22222 2233445567888988754 87665544
No 175
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.38 E-value=1.1e-05 Score=62.10 Aligned_cols=61 Identities=20% Similarity=0.156 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+.+..++.+..+-....+++.|+++++|++..+.| +.....++..++.+..|+++||+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~ 68 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSA 68 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 44555666666666778999999999999999999 58889999999999999999998754
No 176
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.38 E-value=6.3e-06 Score=63.38 Aligned_cols=122 Identities=17% Similarity=0.192 Sum_probs=82.4
Q ss_pred HhhcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 38 FISHW-SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLG----ANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 38 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g----~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
.+++| .++.+...-+.--+.+|++...+-.|++.+++ +|.+++. +........-+..+++||++||+.-+
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~---- 91 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT---- 91 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch----
Confidence 34443 46788889999999999999999999999998 9988876 66666666667788999999998543
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH-HHH--HHHHhhhhchhhhhhhccch
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI-ISM--GLSAFNSAGFLASHADIAPN 167 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~ 167 (179)
|+. +..+.++..++.+.+...+ ......+ +.. ...|..=+...+.+.|..|+
T Consensus 92 ---~~t-I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~ 148 (498)
T COG3104 92 ---RRT-IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK 148 (498)
T ss_pred ---hHH-HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCC
Confidence 333 3456666666666666553 2222222 211 22333345567777777753
No 177
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.38 E-value=7.3e-06 Score=70.36 Aligned_cols=136 Identities=14% Similarity=0.114 Sum_probs=70.8
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhCCCc-ccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTY----MSSYLGANS-HSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----l~~~~g~~~-~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
.++++++++.++...++...+.+....-++.+ +.+..+.+. ...++ .....+...+.++++|+++||+++|..
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~- 84 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL- 84 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH-
Confidence 46666666666665555544433322222222 222222222 22344 455667788999999999999987510
Q ss_pred hhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 111 VLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+......++..+..... ...++.+..++ +..+ ..++..+...+.+.+..|++ ++.+.|+.++
T Consensus 85 ----~~~~~~~~~~~~~~~~~~-~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~ 151 (1140)
T PRK06814 85 ----AKILKFAEIGIAALAIYG-FHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEA 151 (1140)
T ss_pred ----HHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHH
Confidence 011111112222211111 12244444433 3333 34455677888899988765 8888887754
No 178
>KOG2615|consensus
Probab=98.37 E-value=1.9e-06 Score=64.23 Aligned_cols=114 Identities=15% Similarity=0.135 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc----ccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHH
Q psy10147 56 WSTYIIMQWLPTYMSSYLGANS----HSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFL 130 (179)
Q Consensus 56 ~~~~~~~~~~p~~l~~~~g~~~----~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~ 130 (179)
...|.+.+++-.-+++..+.+. .-+| +...+.+...+.++.+|.++||+|| |..+..++++.++..
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGR---------kpvll~c~~~va~s~ 112 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGR---------KPVLLACLIGVALSY 112 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCc---------hHHHHHHHHHHHHHH
Confidence 5567777777777777666554 3356 4666778899999999999999985 466677777777766
Q ss_pred HHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 131 IFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 131 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
..+....+....+. +..|.+-...+...+++.|+.++ +++.+.+.+++
T Consensus 113 ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~ 163 (451)
T KOG2615|consen 113 LLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGT 163 (451)
T ss_pred HHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHhhcChhhccceeeeeeh
Confidence 66666655522222 56666666677889999999864 48877766553
No 179
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.37 E-value=7.6e-06 Score=63.68 Aligned_cols=95 Identities=20% Similarity=0.085 Sum_probs=58.4
Q ss_pred CCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc---------ch---HH
Q psy10147 74 GANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV---------DN---LL 140 (179)
Q Consensus 74 g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~---------~~---~~ 140 (179)
+.+..+.++ .....++..++.+++|+++||++|| +. +..+.++..+..+..... ++ .+
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr--------~~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 121 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR--------DS-LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVP 121 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--------HH-HHHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 777778884 7788899999999999999999875 22 223333333222222110 11 11
Q ss_pred HHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 141 FAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 141 ~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..++ +..+ ..+...+...+++.|..|++ ||.+.++.+
T Consensus 122 ~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~ 162 (479)
T PRK10077 122 EFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQ 162 (479)
T ss_pred HHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHH
Confidence 2222 2222 33444666788899999755 999888754
No 180
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.36 E-value=5.6e-06 Score=62.75 Aligned_cols=61 Identities=7% Similarity=0.160 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
+...+.+++...+......++|.|+++ +|+|..+.| +.....+...++.++.|.++||++|
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~ 68 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANH 68 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 345556666666667778899999976 799999999 4777788899999999999999865
No 181
>KOG0253|consensus
Probab=98.35 E-value=5.5e-06 Score=61.78 Aligned_cols=135 Identities=10% Similarity=0.074 Sum_probs=82.7
Q ss_pred cHHHHhh---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------CCCcccch-h--hhhhHHHH
Q psy10147 34 RWISFIS---HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYL-----------------GANSHSLS-F--TAMPYVLN 90 (179)
Q Consensus 34 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-----------------g~~~~~~g-l--~~~~~~~~ 90 (179)
....++. .++.+..+.+++.....+|+.........|... +-.....- + ..+.....
T Consensus 315 ~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslae 394 (528)
T KOG0253|consen 315 GTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAE 394 (528)
T ss_pred chHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhh
Confidence 3444443 244566777778888888887766555555432 11111111 2 45566778
Q ss_pred HHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc--chHHHHHH-HHHHHHHhhhhchhhhhhhccch
Q psy10147 91 SLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV--DNLLFAVI-ISMGLSAFNSAGFLASHADIAPN 167 (179)
Q Consensus 91 ~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 167 (179)
..|.++.+++.||+||| .-+....+...++.+.+... ++....+. .+-.+....+...+++..|++|.
T Consensus 395 fPGlLIt~~iverlGRK---------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 395 FPGLLITGVIVERLGRK---------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPT 465 (528)
T ss_pred CCchhHHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccch
Confidence 89999999999999864 44444555555555444433 23333333 44455555677789999999997
Q ss_pred h-HHHHHHHhh
Q psy10147 168 H-AGVTFAISN 177 (179)
Q Consensus 168 ~-~g~~~gi~~ 177 (179)
. |+++.|.-.
T Consensus 466 avRatgvGtcS 476 (528)
T KOG0253|consen 466 AVRATGVGTCS 476 (528)
T ss_pred hhhhcchhhhh
Confidence 6 877776543
No 182
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.34 E-value=2.9e-05 Score=61.07 Aligned_cols=93 Identities=11% Similarity=-0.055 Sum_probs=55.7
Q ss_pred Ccccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcch------HHHHHH--HH
Q psy10147 76 NSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDN------LLFAVI--IS 146 (179)
Q Consensus 76 ~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--~~ 146 (179)
+..+.+ +.....++..++.+++|+++||++|| .....+.+...+..+......+ .+..++ +.
T Consensus 54 ~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l 124 (502)
T TIGR00887 54 PSSVSAAVNGSASIGTLAGQLFFGWLADKLGRK---------RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFW 124 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH---------HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHH
Confidence 334445 46667788999999999999999864 2233333333333332222221 222222 22
Q ss_pred H-HHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 147 M-GLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 147 ~-~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
. ...+...+....++.|..|++ ||.+.++.+
T Consensus 125 ~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~ 157 (502)
T TIGR00887 125 LGVGIGGDYPLSAIITSEFATKKWRGAMMAAVF 157 (502)
T ss_pred HHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHH
Confidence 2 233344666789999999865 999988765
No 183
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=2.3e-05 Score=61.02 Aligned_cols=73 Identities=12% Similarity=-0.030 Sum_probs=45.6
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++.+++|+.++......++..............|.+..+|.+. ..+ +.....+.+.++.+++++++||+++|
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 35567788887776655555555444444444444444444332 223 34556677888899999999998764
No 184
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.32 E-value=2.1e-05 Score=62.13 Aligned_cols=131 Identities=17% Similarity=0.244 Sum_probs=81.1
Q ss_pred HhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHH
Q psy10147 38 FISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRR 116 (179)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~ 116 (179)
-+|+|.|..+++.....+.+......-++-++.+ ..-|+...++ .....+...+..+++|.++||+.|| +
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr--------r 76 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR--------R 76 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--------H
Confidence 3678888888888888888887777777766655 3556666664 5556667778888999999999765 2
Q ss_pred HHHHHHhHHhH--HHHHHHhhc--chHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 117 LMTSIGLIGPA--VFLIFFCAV--DNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 117 ~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+...-++... ..+..+... .+.+..+. +..+ +..+..+...+.+.++.|++ ...+.++.+
T Consensus 77 ili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s 145 (524)
T PF05977_consen 77 ILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNS 145 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHH
Confidence 32222221111 111112222 23444333 3333 33455777899999999865 666666554
No 185
>PRK15075 citrate-proton symporter; Provisional
Probab=98.31 E-value=2.8e-05 Score=60.01 Aligned_cols=124 Identities=13% Similarity=0.175 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hh-hhh-----HHHHHHHHHHHHHHHHHHHhcCCchhhhHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FT-AMP-----YVLNSLFCIVAGHFADNLVSHSWTVLTVRR 116 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~-~~~-----~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~ 116 (179)
....++..++...-...+....|. +.++++.+..+.+ +. ... .+...++.++.|+++||++||
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr--------- 86 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR--------- 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH---------
Confidence 344555555555555556667776 5566788877654 32 111 122246788999999999864
Q ss_pred HHHHHHhHHhHHHHHHHhhcchHHH--------HHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 117 LMTSIGLIGPAVFLIFFCAVDNLLF--------AVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..+..+.+...+........++.+. .++ +..++ .+...+....++.|..|++ ||.+.++.+
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~ 159 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQS 159 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHH
Confidence 2333444444444444444444331 111 22222 2223444567889988754 888887643
No 186
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.30 E-value=1.3e-07 Score=74.59 Aligned_cols=74 Identities=14% Similarity=0.192 Sum_probs=0.0
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhh-hHHHHHHHHHHHHHHHHHHHh
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAM-PYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~-~~~~~~ig~~~~g~l~dr~~~ 106 (179)
...+++++||.+....+...+......++.+|+|.|++++|+.++.++. +... ...+.++|.+++|++..|++-
T Consensus 296 ~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl 371 (539)
T PF03137_consen 296 KALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKL 371 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecC
Confidence 4566889999999999999999999999999999999999999999988 4433 334678999999999999853
No 187
>KOG2504|consensus
Probab=98.29 E-value=7.1e-06 Score=64.43 Aligned_cols=123 Identities=14% Similarity=0.112 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q psy10147 45 WSVYIAHFAMNWSTYII----MQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMT 119 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~----~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~ 119 (179)
|...++.+......+++ -.+.+. +++.++.+..++++ ..+......+..++.+.+.||++-| ...
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~-~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R---------~v~ 114 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEE-LMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR---------TVM 114 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHH-HHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch---------HHH
Confidence 34444444444444443 334444 45567888887774 6677777888899999999999753 455
Q ss_pred HHHhHHhHHHHHHHhhcchHHHHHH----HHHHHHHhhhhchhhhhhhccchhHHHHHHHhh
Q psy10147 120 SIGLIGPAVFLIFFCAVDNLLFAVI----ISMGLSAFNSAGFLASHADIAPNHAGVTFAISN 177 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~ 177 (179)
+.|.++..+.++...++.+.|..++ +.....++.+....+.+...++++|+.|.|+..
T Consensus 115 i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~ 176 (509)
T KOG2504|consen 115 IAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAV 176 (509)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhh
Confidence 6677777778887778777766555 222233344555566666777888999998865
No 188
>PRK10054 putative transporter; Provisional
Probab=98.29 E-value=3.5e-06 Score=64.22 Aligned_cols=132 Identities=11% Similarity=0.093 Sum_probs=70.2
Q ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--Ccccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchh
Q psy10147 36 ISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGA--NSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVL 112 (179)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~ 112 (179)
++++++++++...+..++.......+..+.+.|+....+. +....+. .....+......+..|++.||.++|
T Consensus 200 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~----- 274 (395)
T PRK10054 200 SVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR----- 274 (395)
T ss_pred hhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----
Confidence 5778899998888888877777776777888888654333 3333342 2233333344456667777776433
Q ss_pred hhHHHHHHHHhHHhHHHHHHHhhc-chHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 113 TVRRLMTSIGLIGPAVFLIFFCAV-DNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 113 ~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
.....+.+...+....+... ++.+...+ +..+. .+...+...+.+.+..|++ +|+..+..
T Consensus 275 ----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 339 (395)
T PRK10054 275 ----PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ 339 (395)
T ss_pred ----hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH
Confidence 22223333333333333322 33332222 22221 1222344566677777754 66665543
No 189
>KOG1330|consensus
Probab=98.27 E-value=8.8e-06 Score=62.09 Aligned_cols=143 Identities=17% Similarity=0.219 Sum_probs=81.8
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---Ccccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGA---NSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSW 109 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~ 109 (179)
+++.+.+++.+-...+..........++..|.|.+.+..+.+ +..+.. +..+..+++.+|.+++|.++||+.+...
T Consensus 236 Dl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~ 315 (493)
T KOG1330|consen 236 DLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFP 315 (493)
T ss_pred HHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcc
Confidence 444555667666666666666666677778888877765544 333344 4667778899999999999999876322
Q ss_pred --chhhhHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH---HHHHHHHhhhhchhhhhhhccc-hhHHHHHHHh
Q psy10147 110 --TVLTVRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI---ISMGLSAFNSAGFLASHADIAP-NHAGVTFAIS 176 (179)
Q Consensus 110 --~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~gi~ 176 (179)
...+.-......++.+++..+....... +.+..++ ++........+...-...+..| ++|.++.++.
T Consensus 316 ~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~ 390 (493)
T KOG1330|consen 316 NSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALD 390 (493)
T ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHH
Confidence 2222223333444444444444433322 2222222 2222233334455555666654 5588887764
No 190
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.24 E-value=0.00018 Score=54.94 Aligned_cols=134 Identities=10% Similarity=0.117 Sum_probs=81.6
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---Ccccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCC
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGA---NSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSW 109 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~---~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~ 109 (179)
...+++|+|++|.+.+........++.+-...|.|+...++- +....| +.....+.-++...+.+++.+|++.|
T Consensus 212 ~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-- 289 (412)
T PF01306_consen 212 DVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-- 289 (412)
T ss_dssp HHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH--
Confidence 355788999999988888888788888888899999875432 222344 34444556667777788888888753
Q ss_pred chhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--H-HHHHHHhhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 110 TVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--I-SMGLSAFNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+.+.+.+. ...+=.......++++.... + -..-...+.....-+..+.+|++ .++...+.
T Consensus 290 ------~~Lllag~-i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 290 ------NLLLLAGV-IMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp ------HHHHHHHH-HHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred ------hHHHHHHH-HHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 44443333 33333444555666665444 3 33334445555677777777766 66666553
No 191
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.23 E-value=1.8e-05 Score=60.03 Aligned_cols=56 Identities=7% Similarity=0.135 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 51 HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 51 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++...+...+..++|.|+++ +|.|..+.| +.....+...++.+++|.++||++|+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~ 69 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQL 69 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcch
Confidence 555556677788899999976 699999999 57778888999999999999999864
No 192
>TIGR00898 2A0119 cation transport protein.
Probab=98.23 E-value=3e-06 Score=66.44 Aligned_cols=104 Identities=11% Similarity=0.043 Sum_probs=68.6
Q ss_pred HHHHHHHHHhCCC---cccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchH
Q psy10147 64 WLPTYMSSYLGAN---SHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNL 139 (179)
Q Consensus 64 ~~p~~l~~~~g~~---~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 139 (179)
..|. ++++++++ ..+.+ ...+..++..++.++.|+++||++|| .....+.+...+..+.....++.
T Consensus 111 ~~~~-i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr---------~~~~~~~~~~~i~~~~~~~~~~~ 180 (505)
T TIGR00898 111 FSST-IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK---------KVLLLSTLVTAVSGVLTAFSPNY 180 (505)
T ss_pred cccc-EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch---------HHHHHHHHHHHHHHHHHHHcccH
Confidence 4455 45668888 67777 47788899999999999999999864 23334555555455445555555
Q ss_pred HHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 140 LFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 140 ~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+..++ +..+ ..+...+...+.+.|..|++ |+.+.++.+
T Consensus 181 ~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~ 222 (505)
T TIGR00898 181 TVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQ 222 (505)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHH
Confidence 54444 2222 22333666788889988765 888777653
No 193
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.18 E-value=0.00013 Score=58.30 Aligned_cols=137 Identities=9% Similarity=0.072 Sum_probs=81.1
Q ss_pred CcHHHHhhc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---cchh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISH-WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSH---SLSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~---~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.|. +++++ +.+....++.+...+.+|....+.|......++-|+. +.++ ......+..+|..+.|.+..++++-
T Consensus 301 ~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~ 379 (599)
T PF06609_consen 301 FPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI 379 (599)
T ss_pred CCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch
Confidence 444 68887 4566666777777888888889999999988888764 4554 4455566778888888888776421
Q ss_pred CCchhhhHHHHHHHHhHHhHHHHHHHh--hcchH--HHHHH-HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 108 SWTVLTVRRLMTSIGLIGPAVFLIFFC--AVDNL--LFAVI-ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 108 ~~~~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
| +.++++.+....++-.+. ..++. +..+. ++....+.........++-..|++ .|+++|+..+
T Consensus 380 -------K-w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s 448 (599)
T PF06609_consen 380 -------K-WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGS 448 (599)
T ss_pred -------h-HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHH
Confidence 3 333344444433322222 22222 22222 333333333334455555555654 8888887643
No 194
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.13 E-value=2e-05 Score=60.81 Aligned_cols=126 Identities=14% Similarity=0.183 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
.......+..+........|+..|++++.|+++..+| +..+.-+.=++.-|+.|.++||-++|++. ||.+++.+.
T Consensus 15 i~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~Gr----fRP~lL~g~ 90 (467)
T COG2211 15 IGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGR----FRPWLLWGA 90 (467)
T ss_pred HhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccccc----ccHHHHHHh
Confidence 3556666666677777889999999999999999999 56677788899999999999987766554 455555665
Q ss_pred HHhHHHHHHHhhcc------hHHHHHH--HHH-HHHHhhhhchhhhhhhcc--chhHHHHHH
Q psy10147 124 IGPAVFLIFFCAVD------NLLFAVI--ISM-GLSAFNSAGFLASHADIA--PNHAGVTFA 174 (179)
Q Consensus 124 ~~~~~~~~~~~~~~------~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~--~~~~g~~~g 174 (179)
+..++...+....+ +.....+ +.. .+......++.+...++. |++|....+
T Consensus 91 ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s 152 (467)
T COG2211 91 IPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTS 152 (467)
T ss_pred HHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHH
Confidence 55555444443332 1122222 222 223333555777777776 445655544
No 195
>PTZ00207 hypothetical protein; Provisional
Probab=98.07 E-value=0.00015 Score=57.91 Aligned_cols=138 Identities=11% Similarity=0.064 Sum_probs=88.6
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--ch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS--LS-FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~--~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
++++.+++..+|++++..+|....-..+.+.+-.+.+..-|.+... .. +..+..+.+.+|.+..|+++....+|...
T Consensus 345 t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~ 424 (591)
T PTZ00207 345 TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAE 424 (591)
T ss_pred hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccc
Confidence 7888899999999999999998888888999999887743774433 33 57888899999999999998444444322
Q ss_pred hhhhHHHHHHHHhHHhHHHHHHHh-hcc--hHHHHHHHHHHHHHhhhhchhhhhhhccchhHHHH
Q psy10147 111 VLTVRRLMTSIGLIGPAVFLIFFC-AVD--NLLFAVIISMGLSAFNSAGFLASHADIAPNHAGVT 172 (179)
Q Consensus 111 ~~~~r~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 172 (179)
++..|...+.+..+ +.+..+.+. ..+ ......++.....|...+...+...|++.++-|+-
T Consensus 425 ~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~ 488 (591)
T PTZ00207 425 DRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKH 488 (591)
T ss_pred cccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHH
Confidence 22224444444444 222222222 222 12222223334455667777888888887655554
No 196
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.06 E-value=2.9e-05 Score=60.39 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=60.8
Q ss_pred HhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhh--cchHHHHHH--HH
Q psy10147 72 YLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCA--VDNLLFAVI--IS 146 (179)
Q Consensus 72 ~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~ 146 (179)
+++++..+.| +.....++..++.+.+|+++||+++| ..+..+.+...+..+.... ..+.+..++ +.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK---------WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc---------hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 5788888888 47778889999999999999999865 2222333333333322221 122222222 33
Q ss_pred HHH-HHhhhhchhhhhhhccch-hHHHHHHHhhc
Q psy10147 147 MGL-SAFNSAGFLASHADIAPN-HAGVTFAISNT 178 (179)
Q Consensus 147 ~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~~ 178 (179)
.++ .+...+.....+.+..|+ +|+.+.|+.+.
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 174 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTS 174 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 332 233355667788888875 59999887653
No 197
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.04 E-value=6.3e-05 Score=56.32 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc---
Q psy10147 61 IMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD--- 137 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--- 137 (179)
+..-+|.++++ +|+|.++.|+.....+...+ .++.|.++||+..|...+ ||.++..+.+..++....+.+..
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 44567777765 69999998842222333333 889999999984221000 33333344444443333333321
Q ss_pred hHHHHHH--HHHH-HHHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 138 NLLFAVI--ISMG-LSAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 138 ~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
+.+.... +..+ ..+.......+.+.|..|+ +|+.+.|+..
T Consensus 82 ~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~ 125 (356)
T TIGR00901 82 DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYI 125 (356)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHH
Confidence 2222222 2222 2223345577888898865 4888877654
No 198
>KOG2563|consensus
Probab=98.02 E-value=2.2e-05 Score=59.84 Aligned_cols=74 Identities=14% Similarity=-0.020 Sum_probs=57.9
Q ss_pred CCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 32 GPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
..++++.++|+++....+++......+++..+.+-.-+.- .|++...+|+ .....+.++++..+.|.+.||..+
T Consensus 256 ~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~ 330 (480)
T KOG2563|consen 256 PKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKK 330 (480)
T ss_pred HHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3456788999999988888888877777777766643433 4788778885 677778899999999999999743
No 199
>KOG0254|consensus
Probab=98.01 E-value=0.00019 Score=56.67 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=59.2
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHH-HHHHhhhhchh
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISM-GLSAFNSAGFL 158 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 158 (179)
+.....++..++++++|+++|++||| ..+..+.+...+..+....+.+.....+ +.. ...|.......
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk---------~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~p 164 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRK---------KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcch
Confidence 46777889999999999999999864 3344455555555555555555555444 222 23344456678
Q ss_pred hhhhhccchh-HHHHHHHhh
Q psy10147 159 ASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 159 ~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+..|+.|++ ||...+..+
T Consensus 165 iy~sEiap~~~RG~l~~~~~ 184 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQ 184 (513)
T ss_pred hhHhhcCChhhhHHHHHHHH
Confidence 9999999886 998877654
No 200
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.00 E-value=5.6e-05 Score=48.26 Aligned_cols=86 Identities=21% Similarity=0.237 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHH-HHHhhhhchhhh
Q psy10147 84 AMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMG-LSAFNSAGFLAS 160 (179)
Q Consensus 84 ~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~ 160 (179)
....++..++.++.|++.||+++| +. ...+.....+........++.+.... +..+ ..+...+.....
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK--------PV-LLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAAL 75 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh--------HH-HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 345567788899999999998764 22 23333333333333333344443333 2222 233345567788
Q ss_pred hhhccchh-HHHHHHHhhc
Q psy10147 161 HADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 161 ~~~~~~~~-~g~~~gi~~~ 178 (179)
..|..|++ ++.+.++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~ 94 (141)
T TIGR00880 76 IADIYPPEERGVALGLMSA 94 (141)
T ss_pred HHHHCChhhhhHHHHHHHH
Confidence 88888765 8888887664
No 201
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.98 E-value=0.00045 Score=52.29 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=52.5
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHH
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFAD 102 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~d 102 (179)
..|+++..+|....+...-+....+++.=-..+-.|--+++|+++.++. +...-..+..+|..+.|++..
T Consensus 199 ~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~ 269 (403)
T PF03209_consen 199 EAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS 269 (403)
T ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566777888776666666666565555555777788899999999988 777777788888888888755
No 202
>KOG3764|consensus
Probab=97.97 E-value=4.3e-05 Score=57.49 Aligned_cols=107 Identities=14% Similarity=-0.010 Sum_probs=76.1
Q ss_pred CCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCC
Q psy10147 31 NGPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSW 109 (179)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~ 109 (179)
+..++++++++|.++.....-...+...-..---+|.+..|.+.-+..+.|+ .....+...+++.+.|.++||+...
T Consensus 259 ~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~-- 336 (464)
T KOG3764|consen 259 QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL-- 336 (464)
T ss_pred cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCch--
Confidence 4457899999999998888777777777777778889999988855558886 4445577889999999999999743
Q ss_pred chhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH
Q psy10147 110 TVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI 144 (179)
Q Consensus 110 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
|+.....+++...........+++....++
T Consensus 337 -----~wl~~~~gl~~~G~~~~~iP~~~~~~~L~v 366 (464)
T KOG3764|consen 337 -----RWLLSLGGLATVGVSSGPIPFATSIAQLWV 366 (464)
T ss_pred -----hHHHHHHHHHHHHHHhchhHhhhhHHHHhh
Confidence 544445555554444444445554444444
No 203
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.89 E-value=3.6e-05 Score=62.27 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 57 STYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 57 ~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
...++..-.-.-+++.++++..+.| +.....++..++.++.+++.||.+||
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~ 98 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP 98 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc
Confidence 3334444333446778999999999 57788889999999999999998765
No 204
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.82 E-value=0.00011 Score=52.47 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHH
Q psy10147 53 AMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLI 131 (179)
Q Consensus 53 ~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~ 131 (179)
......|.+..|.|. +++.+|+|.+|.. +...-.++..+| +..|.+.|+++. +....++.+....+..
T Consensus 13 ~~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp---------~~~l~iG~~~~~~GY~ 81 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGP---------WVVLLIGAVLGFVGYG 81 (250)
T ss_pred HhcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcch---------HHHHHHHHHHHHHHHH
Confidence 445678889999998 6778999999977 455556666664 778999999863 3444455555555554
Q ss_pred HHhh--cc-----hHHHHHH-HHHHHHHhhh--hchhhhhhhccchhHHHHHHHh
Q psy10147 132 FFCA--VD-----NLLFAVI-ISMGLSAFNS--AGFLASHADIAPNHAGVTFAIS 176 (179)
Q Consensus 132 ~~~~--~~-----~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~gi~ 176 (179)
.... .+ ..|...+ ...+..+.+. .........-+|++||++.|+.
T Consensus 82 ~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgil 136 (250)
T PF06813_consen 82 LLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGIL 136 (250)
T ss_pred HHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhh
Confidence 4332 11 1222222 3333333222 2233444456799999998875
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.80 E-value=1.2e-05 Score=61.90 Aligned_cols=121 Identities=13% Similarity=0.140 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHH
Q psy10147 51 HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVF 129 (179)
Q Consensus 51 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~ 129 (179)
.+...........+++.|+++..|+++...| .....-+..++..|+.|.++||...|.+. ||..+..+.+..++.
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Gr----rrp~~l~g~i~~~~~ 85 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGR----RRPWILIGAILLALS 85 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccc----cceEeehhhHHHHHH
Confidence 4555666667778999999999999999989 47777788999999999999954433222 334444555555555
Q ss_pred HHHHhhc-c---hH----HHHHH--H-HHHHHHhhhhchhhhhhhccc--hhHHHHHHH
Q psy10147 130 LIFFCAV-D---NL----LFAVI--I-SMGLSAFNSAGFLASHADIAP--NHAGVTFAI 175 (179)
Q Consensus 130 ~~~~~~~-~---~~----~~~~~--~-~~~~~~~~~~~~~~~~~~~~~--~~~g~~~gi 175 (179)
...+... + +. ....+ + .-....+....+.+...|+.+ ++|....+.
T Consensus 86 ~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~ 144 (428)
T PF13347_consen 86 FFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSW 144 (428)
T ss_pred HHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHH
Confidence 4444433 2 11 11111 1 122223335557888888875 346665554
No 206
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.74 E-value=0.0024 Score=50.01 Aligned_cols=36 Identities=8% Similarity=0.224 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCc
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSS-YLGANS 77 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~ 77 (179)
+.++.++++.++.-.+++.+..|...|+.+ .++-++
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~ 294 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSV 294 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCC
Confidence 568899999999999999999999998885 566554
No 207
>KOG0569|consensus
Probab=97.71 E-value=0.00081 Score=52.51 Aligned_cols=108 Identities=11% Similarity=0.199 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhCCCccc--ch-----hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHh-
Q psy10147 63 QWLPTYMSSYLGANSHS--LS-----FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFC- 134 (179)
Q Consensus 63 ~~~p~~l~~~~g~~~~~--~g-----l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~- 134 (179)
.|.-.-+.+.+|.+..+ .. ...+..+++++|+.++|+++||+|||... ....+..+.++ .+..+.
T Consensus 39 ~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l------~~~~~l~~~~~-~~~~~s~ 111 (485)
T KOG0569|consen 39 SFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNAL------LLSNLLAVLAA-LLMGLSK 111 (485)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH------HHHHHHHHHHH-HHHHHHH
Confidence 34434445556744433 22 23456689999999999999999976210 11111111112 122222
Q ss_pred hcchHHHHHH--HHHH-HHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 135 AVDNLLFAVI--ISMG-LSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 135 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
..++....++ +..| ..+........+..|..|++ ||....+.+
T Consensus 112 ~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~ 158 (485)
T KOG0569|consen 112 SAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQ 158 (485)
T ss_pred HhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHH
Confidence 2233444444 3333 45556777888999999987 998766543
No 208
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.67 E-value=0.0007 Score=51.46 Aligned_cols=63 Identities=19% Similarity=0.308 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh---hhhhHHHHHHHHHHH-HHHHHHHHhc
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF---TAMPYVLNSLFCIVA-GHFADNLVSH 107 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl---~~~~~~~~~ig~~~~-g~l~dr~~~r 107 (179)
+......++.+..........+|.|+++. |+|..+.|+ ..+|+....+..++. ++.+||.++|
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r 69 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRR 69 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcc
Confidence 34566677788777777889999999875 999999994 356777777777766 4467777654
No 209
>KOG0255|consensus
Probab=97.67 E-value=0.00015 Score=57.27 Aligned_cols=96 Identities=13% Similarity=0.166 Sum_probs=66.8
Q ss_pred HHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHH
Q psy10147 71 SYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISM 147 (179)
Q Consensus 71 ~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 147 (179)
+.++.+.....+ ..+..++..+|.++.|.++||+|| |.....+.+...++-+.....++.+...+ ...
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GR---------k~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGR---------KPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLS 181 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhccc---------HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 334555555554 777888999999999999999875 45556677776666666677777766555 333
Q ss_pred H-HHHhhhhchhhhhhhccc-hhHHHHHHH
Q psy10147 148 G-LSAFNSAGFLASHADIAP-NHAGVTFAI 175 (179)
Q Consensus 148 ~-~~~~~~~~~~~~~~~~~~-~~~g~~~gi 175 (179)
+ ..+......+.++.|..+ ++|+.+..+
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHH
Confidence 3 333446667888899885 558888776
No 210
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.61 E-value=0.0057 Score=48.24 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=68.8
Q ss_pred HHhhcHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-------hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYI-A-HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-------FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-------l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++|++.+....+ . .......+....+.+|.|.++..+.+ ..| +..+..+...+..++.+++.||+++|
T Consensus 262 ~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~--~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r 339 (489)
T PRK10207 262 KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHE--ILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK 339 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccc--ccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC
Confidence 3455555444332 2 22333334444577888887644432 223 22222344557788889999999887
Q ss_pred CCchhhhHHHHHHHHhHHhHHHHH-------HHhhc---chHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHH
Q psy10147 108 SWTVLTVRRLMTSIGLIGPAVFLI-------FFCAV---DNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTF 173 (179)
Q Consensus 108 ~~~~~~~r~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~ 173 (179)
+.......+... +++..++.+. ..... .+.+..+. +..+. -++..+...+.+.+..|++ +|.++
T Consensus 340 ~~~~~~~~k~~~--G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~ 417 (489)
T PRK10207 340 GKDLSMPMKFTL--GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFIL 417 (489)
T ss_pred CCCCCcHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHH
Confidence 533322233222 2222222221 11111 12333222 22222 2233555577777778876 99998
Q ss_pred HHhhc
Q psy10147 174 AISNT 178 (179)
Q Consensus 174 gi~~~ 178 (179)
|+.++
T Consensus 418 g~~~l 422 (489)
T PRK10207 418 GMWFL 422 (489)
T ss_pred HHHHH
Confidence 88653
No 211
>KOG3764|consensus
Probab=97.61 E-value=0.0003 Score=53.10 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=67.5
Q ss_pred Ccccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHH-
Q psy10147 76 NSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSA- 151 (179)
Q Consensus 76 ~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~- 151 (179)
+..+.| +.+.-.+...+.+++.|.+.||+++| ..++.|++.+....+.+.+..+.+..++ ...+...
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~---------ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYK---------IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccc---------cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 345577 57777789999999999999999854 6667788887777777777776665555 4444433
Q ss_pred hhhhchhhhhhhccchh--HHHHHHHhh
Q psy10147 152 FNSAGFLASHADIAPNH--AGVTFAISN 177 (179)
Q Consensus 152 ~~~~~~~~~~~~~~~~~--~g~~~gi~~ 177 (179)
+....-.++++|.+|++ ||.+.|+.-
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGial 202 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIAL 202 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHH
Confidence 33444578899999864 799988753
No 212
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.58 E-value=0.0053 Score=47.48 Aligned_cols=72 Identities=11% Similarity=0.196 Sum_probs=51.9
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.+|+..++++.++......++ +....++-..+..|+.++ |+++...| +-....+.+..|..+..++.+|+|-
T Consensus 250 ~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl 322 (432)
T PF06963_consen 250 RGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL 322 (432)
T ss_pred ccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 456666666655544443333 444666777888899887 99999888 5666777788888999999888863
No 213
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.57 E-value=0.00062 Score=53.24 Aligned_cols=60 Identities=15% Similarity=0.113 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
...+...++..... +.....++.++.+++|+|+.+.+ +.....+...+ .+++|.++||+.
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~ 88 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFP 88 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcC
Confidence 34555677777777 77888899999999999999986 55555544444 666999999995
No 214
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.57 E-value=0.0018 Score=48.71 Aligned_cols=80 Identities=19% Similarity=0.183 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHH--------HHH--HHHHH-HHhhhhch
Q psy10147 89 LNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLF--------AVI--ISMGL-SAFNSAGF 157 (179)
Q Consensus 89 ~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~~-~~~~~~~~ 157 (179)
...++.++.|+++||+++| ..+..+.+...+........++... .++ +..+. .+...+..
T Consensus 47 ~~~i~~~~~G~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~ 117 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRK---------KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGA 117 (394)
T ss_pred HhhhHHHHhhhhhhhhhhH---------HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhcccccccc
Confidence 3356889999999999864 3333455444444444444433221 111 22222 12234456
Q ss_pred hhhhhhccch-hHHHHHHHhh
Q psy10147 158 LASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 158 ~~~~~~~~~~-~~g~~~gi~~ 177 (179)
...+.|..|+ +|+...++.+
T Consensus 118 ~~~~~~~~~~~~r~~~~~~~~ 138 (394)
T TIGR00883 118 ALYLAEYAPPGKRGFYGSFQQ 138 (394)
T ss_pred HHHhhhcCCcccchHHHHHHH
Confidence 6778888865 4877766543
No 215
>KOG2615|consensus
Probab=97.44 E-value=0.0018 Score=48.84 Aligned_cols=121 Identities=8% Similarity=-0.030 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHH
Q psy10147 50 AHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAV 128 (179)
Q Consensus 50 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~ 128 (179)
..+.+...+-+..++.+.+..+.+|+++.+.| +.....+.+.+....-....||... . .+......+.....
T Consensus 269 ~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~---~----~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 269 HYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG---N----IKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhcccccccccc---c----hhhHHHHHHHHHHH
Confidence 33344333333444444544667899999999 5666666555533333333333211 0 12223334433333
Q ss_pred HHHHHhhcchHHHHHHHHHHHH----Hhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 129 FLIFFCAVDNLLFAVIISMGLS----AFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
.+..+.......... ++..+. ..........+....|+. ||++.|+..+
T Consensus 342 ~~llls~~~~~~~l~-~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~S 395 (451)
T KOG2615|consen 342 AFLLLSLARTPVVLY-LGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRS 395 (451)
T ss_pred HHHHHhccccchhhh-HHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHH
Confidence 333333333222111 222222 222333455555566654 9999998653
No 216
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.42 E-value=0.0016 Score=38.38 Aligned_cols=76 Identities=12% Similarity=0.141 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHH
Q psy10147 55 NWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFF 133 (179)
Q Consensus 55 ~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~ 133 (179)
..+-+.+...+|. ++++.++|..+++ +...-+++..+|.+...++.++..+ +.....+++...+.....
T Consensus 5 GigRFayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRP---------RRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccH---------HHHHHHHHHHHHHHHHHH
Confidence 3456677778888 5566799999999 5777888899999988888776322 233344555555555555
Q ss_pred hhcchHH
Q psy10147 134 CAVDNLL 140 (179)
Q Consensus 134 ~~~~~~~ 140 (179)
...++.+
T Consensus 75 a~~~~~~ 81 (85)
T PF06779_consen 75 ALTHSFW 81 (85)
T ss_pred HHHhchH
Confidence 5444443
No 217
>KOG0254|consensus
Probab=97.37 E-value=0.0016 Score=51.55 Aligned_cols=127 Identities=15% Similarity=0.133 Sum_probs=77.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHH
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTS 120 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~ 120 (179)
++.++...+..+.+..+.....+|.+.++++. |.+........+..+...++..++.++.||++|| .++.
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr---------~lll 363 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKSDTFLASIILGVVNFLGTLVATYLVDRFGRR---------KLLL 363 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHH
Confidence 44456677777777778888889999987764 6654322235566777888888899999999753 4444
Q ss_pred HHhHHhHHHHHHHhhc----c--------hHHHHHH-HHH--HHHHhh-hhchhhhhhhccchh-HHHHHHHhh
Q psy10147 121 IGLIGPAVFLIFFCAV----D--------NLLFAVI-ISM--GLSAFN-SAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 121 ~~~~~~~~~~~~~~~~----~--------~~~~~~~-~~~--~~~~~~-~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.....+..+.+... . ..+..+. ... ..+... .+..|....|.+|.+ |+.+.++..
T Consensus 364 ~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~ 437 (513)
T KOG0254|consen 364 FGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAV 437 (513)
T ss_pred HhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHH
Confidence 5555554444433211 1 1122222 222 122222 444677889999976 777766643
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.0039 Score=46.75 Aligned_cols=107 Identities=16% Similarity=0.128 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchH
Q psy10147 61 IMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNL 139 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 139 (179)
.-..++. +++++|+|...+| ++.+|.+...+.+++..+++.|++.+ |. ...+++...+....-... +.
T Consensus 31 vgPLL~~-Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-------r~--l~~~Llli~~G~~iR~~~-~~ 99 (395)
T COG2807 31 VGPLLDE-IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-------RS--LFLALLLIAAGILIRSLG-GL 99 (395)
T ss_pred hhhhHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-------HH--HHHHHHHHHHHHHHHhcc-cH
Confidence 3344444 5566899999999 69999999999999999999999753 32 233444444444433322 22
Q ss_pred HHHHH---HHHHHHHhhhhchhhhhhhccchhHHHHHHHhhc
Q psy10147 140 LFAVI---ISMGLSAFNSAGFLASHADIAPNHAGVTFAISNT 178 (179)
Q Consensus 140 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gi~~~ 178 (179)
+..+. +.....+.........+.+-+|++.+..+|++.+
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~ 141 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYST 141 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHH
Confidence 33333 2222233345557777888889988888887653
No 219
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.30 E-value=0.047 Score=42.96 Aligned_cols=132 Identities=13% Similarity=0.072 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc----ch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS----LS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLM 118 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~----~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~ 118 (179)
+....+...+....+.-..+.+|.|.++..+.+... .+ +..+..+...+..++..++-.|+.+|...+....|
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k-- 351 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK-- 351 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH--
Confidence 333444444444444445666788777765554322 23 34444444455444444444455554222222222
Q ss_pred HHHHhHHhHHHHHHHhh---------cchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 119 TSIGLIGPAVFLIFFCA---------VDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 119 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
+.++.+..++.+..... ..+.++.+. +..+. -.+..+..++...+..|++ ||...|+..
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~ 423 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWF 423 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 23344444433333221 124444333 22222 2234667788888999876 999988765
No 220
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.20 E-value=0.015 Score=44.55 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=45.0
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCcccch-hhhhhHHHHHHHHHHHHHHHHHH
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLG--ANSHSLS-FTAMPYVLNSLFCIVAGHFADNL 104 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g--~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~ 104 (179)
+++..++|.++.-.+-+.+...+++-+.+|......+.-. -+..--| .-+...+.++++.+..|++..++
T Consensus 240 ~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w 312 (412)
T PF01770_consen 240 FKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW 312 (412)
T ss_pred HHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch
Confidence 3345567877776676777778888888888887776511 1111234 35566677777888888874333
No 221
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.10 E-value=0.013 Score=46.01 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=42.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhh-cchHH-HHHH---HHHHHHHhhhhch
Q psy10147 83 TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCA-VDNLL-FAVI---ISMGLSAFNSAGF 157 (179)
Q Consensus 83 ~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~---~~~~~~~~~~~~~ 157 (179)
..+..+..++..|+.|-++|+-++| ++.+.. ......+....+.+ .++.+ ...+ ++..........+
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~R-------k~~l~~-~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfy 147 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRR-------KRFLLI-FTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFY 147 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccc-------hHHHHH-HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667788889999999986654 333333 33333333333333 23333 2222 4444444556667
Q ss_pred hhhhhhccch
Q psy10147 158 LASHADIAPN 167 (179)
Q Consensus 158 ~~~~~~~~~~ 167 (179)
.++..++.++
T Consensus 148 na~LP~la~~ 157 (477)
T PF11700_consen 148 NAYLPDLARP 157 (477)
T ss_pred HHHhHhhcCC
Confidence 8888888753
No 222
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.95 E-value=0.00097 Score=52.20 Aligned_cols=135 Identities=13% Similarity=0.001 Sum_probs=65.3
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLT 113 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~ 113 (179)
.++.+++|.++...+..++.....-+....+-.+.++.+|+++.+.|+ .....++..++..+.+++.+|++.
T Consensus 245 l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~------- 317 (468)
T TIGR00788 245 LRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPY------- 317 (468)
T ss_pred HHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCH-------
Confidence 445667787776554444411111111111111344568999999994 555445555555555544443321
Q ss_pred hHHHHHHHHhHHhHHHHHHHh-----h-----cchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhhc
Q psy10147 114 VRRLMTSIGLIGPAVFLIFFC-----A-----VDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISNT 178 (179)
Q Consensus 114 ~r~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~~ 178 (179)
|+. ...+.+...+...... + .++.+.... +-....+.........+.+..|++ .|+..|+.++
T Consensus 318 -r~~-l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s 394 (468)
T TIGR00788 318 -RLL-FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLAS 394 (468)
T ss_pred -HHH-HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHH
Confidence 333 3334433333221111 0 011111111 222233444556688888888765 8888887764
No 223
>KOG0252|consensus
Probab=96.91 E-value=0.0081 Score=46.55 Aligned_cols=31 Identities=19% Similarity=0.143 Sum_probs=25.0
Q ss_pred cccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 77 SHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 77 ~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+...+ ......++.++|.++.|++.||++||
T Consensus 83 s~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 83 SGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 33344 36777889999999999999999976
No 224
>KOG3762|consensus
Probab=96.91 E-value=0.00051 Score=53.78 Aligned_cols=55 Identities=18% Similarity=0.211 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 52 FAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 52 ~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++...+..+...+++|..+ +|+++.+.| ++..--++.+++.|++|+++||+.+|
T Consensus 21 ~~~~~~~g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~ 76 (618)
T KOG3762|consen 21 LFFGARFGSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKR 76 (618)
T ss_pred eeeeecccccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhc
Confidence 33344555577788898876 799999999 66555567899999999999999765
No 225
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.90 E-value=0.039 Score=42.09 Aligned_cols=62 Identities=16% Similarity=0.120 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHh
Q psy10147 63 QWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFC 134 (179)
Q Consensus 63 ~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~ 134 (179)
...|. +++.++++..++++ ....+.+..++.+..|++.+|++.| .-+..++.+.++.+.++.
T Consensus 34 iLip~-l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk---------~gi~lgL~l~avg~~lF~ 96 (422)
T COG0738 34 ILIPH-LKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK---------AGIVLGLLLYAVGAALFW 96 (422)
T ss_pred hhHHH-HHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH---------HHHHHHHHHHHHHHHHHh
Confidence 34455 88999999999995 7778888899999999999999854 334456666666666654
No 226
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.76 E-value=5.4e-06 Score=64.03 Aligned_cols=135 Identities=14% Similarity=0.178 Sum_probs=67.2
Q ss_pred CcHHHHhhcHH----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 33 PRWISFISHWS----LWSVYIAHF-AMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 33 ~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
..++++++++. ........+ ....+.+....+.|.++++ .+.+... ....+..+...++.+++.++.||++||
T Consensus 239 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GRr 316 (451)
T PF00083_consen 239 ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNSF-LATLILGLVNFLGTLLAIFLIDRFGRR 316 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccc-ccccccc-ccccccccccccccccccccccccccc
Confidence 34666766533 222222222 2233444455666665544 5776651 123334455666677788999999875
Q ss_pred CCchhhhHHHHHHHHhHHhHHHHHHHh-----hcch----HHHHHH---HHHHHHH-hhhhchhhhhhhccchh-HHHHH
Q psy10147 108 SWTVLTVRRLMTSIGLIGPAVFLIFFC-----AVDN----LLFAVI---ISMGLSA-FNSAGFLASHADIAPNH-AGVTF 173 (179)
Q Consensus 108 ~~~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~ 173 (179)
.....+.+..++...... ..++ ....+. +.....+ ...+..+.+..|.+|.+ |+++.
T Consensus 317 ---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~ 387 (451)
T PF00083_consen 317 ---------KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGI 387 (451)
T ss_pred ---------cccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccc
Confidence 222233333332222221 1111 111111 2222222 22344678889999976 88887
Q ss_pred HHhhc
Q psy10147 174 AISNT 178 (179)
Q Consensus 174 gi~~~ 178 (179)
|+...
T Consensus 388 ~~~~~ 392 (451)
T PF00083_consen 388 GLSYA 392 (451)
T ss_pred ccccc
Confidence 77653
No 227
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.75 E-value=0.00013 Score=56.39 Aligned_cols=87 Identities=15% Similarity=0.090 Sum_probs=54.6
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc---hHHHHHH--HHHH-HHHhhhh
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD---NLLFAVI--ISMG-LSAFNSA 155 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~-~~~~~~~ 155 (179)
+.....++..+|++++|+++||+||| .....+.+...+..+.....+ +.+...+ +..| ..|....
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRK---------PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHhhhccccccccccccccccc---------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36677788999999999999999875 223334444444444444444 4443333 2222 3344466
Q ss_pred chhhhhhhccchh-HHHHHHHhh
Q psy10147 156 GFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 156 ~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
....+..|..|++ ||...++.+
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~ 144 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQ 144 (451)
T ss_pred ccccccccccccccccccccccc
Confidence 6788899998754 887765544
No 228
>KOG0252|consensus
Probab=96.51 E-value=0.0043 Score=48.00 Aligned_cols=126 Identities=16% Similarity=0.185 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-----hh-----hhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-----TA-----MPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-----~~-----~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
+..+..+..++....+.|+...+....+++ .|+.+.+.-+ .+ +.......|..+...++|+++
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG------ 376 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG------ 376 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh------
Confidence 456677888899999999999999998876 4776654322 11 111222334555667889987
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcch----HHHHHH---HHHHHHHhh-hhchhhhhhhccchh-HHHHHHHhh
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDN----LLFAVI---ISMGLSAFN-SAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
|++..+.+.++..++.+.+...-+ ....++ +..++..+. ........+|.+|.+ ||+..|+.-
T Consensus 377 ---Rk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsA 448 (538)
T KOG0252|consen 377 ---RKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISA 448 (538)
T ss_pred ---hHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHH
Confidence 556677787777776665543322 111111 333333333 334678889999987 999988753
No 229
>KOG3762|consensus
Probab=96.49 E-value=0.009 Score=47.12 Aligned_cols=131 Identities=11% Similarity=0.129 Sum_probs=78.4
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVR 115 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r 115 (179)
+++.++....+.+..+....+...+.+++=-++++ .+-.+..-| ..+.-.++-++.-++.+++..|+++-
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-------- 436 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-------- 436 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--------
Confidence 45667776666666666656666666666444444 454444455 34444455566666777888887642
Q ss_pred HHHHHHHhHHhHHHHHHHhhcchHHHHHH---HHHHHHHhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 116 RLMTSIGLIGPAVFLIFFCAVDNLLFAVI---ISMGLSAFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.++..++.....=++.+.+..++|..+. +-....+..+...-+++....|++ +.++-|+..
T Consensus 437 -~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~ 501 (618)
T KOG3762|consen 437 -NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQ 501 (618)
T ss_pred -ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHH
Confidence 2233344444444455556667776554 333345566777788888888876 888777654
No 230
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.35 E-value=0.016 Score=44.41 Aligned_cols=99 Identities=14% Similarity=0.204 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHhCC---Ccccch----h-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHH
Q psy10147 61 IMQWLPTYMSSYLGA---NSHSLS----F-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIF 132 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~---~~~~~g----l-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~ 132 (179)
..++.|.|+++..+- ++.+.. + .++..+..++-.|+-|.++|+.+.| |+++..+.. ...+..+.
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~R-------k~~~~~f~~-i~i~~~~~ 105 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPR-------KKFFGFFTA-IGIISTFL 105 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCc-------chHHHHHHH-HHHHHHHH
Confidence 456778888887655 555432 2 3445566677788889999998866 444433333 33333334
Q ss_pred Hhhcc--hHHHHHH----HHHHHHHhhhhchhhhhhhccch
Q psy10147 133 FCAVD--NLLFAVI----ISMGLSAFNSAGFLASHADIAPN 167 (179)
Q Consensus 133 ~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 167 (179)
+.+.+ +.+...+ ++...+......+.+++.+..++
T Consensus 106 L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k 146 (438)
T COG2270 106 LWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTK 146 (438)
T ss_pred HHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCc
Confidence 44333 2333322 33344445566678888887754
No 231
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.27 E-value=0.19 Score=37.89 Aligned_cols=62 Identities=18% Similarity=0.338 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
++++..........+....+.+ ..| +.+|++..+.+ +....++.+.+..++.|.++||+|||
T Consensus 37 r~yl~vY~La~~aDWLQGpY~Y--~LY--~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk 99 (354)
T PF05631_consen 37 RKYLLVYLLAMAADWLQGPYLY--ALY--ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK 99 (354)
T ss_pred HHHHHHHHHHHHHHHhhcchhH--HHH--HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 3444444333444444332222 333 45899999988 67777788888899999999999864
No 232
>KOG2533|consensus
Probab=96.22 E-value=0.21 Score=39.65 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=59.6
Q ss_pred HHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHH
Q psy10147 71 SYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISM 147 (179)
Q Consensus 71 ~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 147 (179)
++.++...+-+ +..+.+++.+++.+.++.+.||+.- .+.+...+++......+ -...++.+..+. +..
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l--------s~~l~~~~~~w~~~~~~-~~~~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL--------SKGLSVSGILWGLFGFL-TAAVHSFPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh--------HHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHH
Confidence 44556666666 5778889999999999999999852 33444333333332222 222445544444 444
Q ss_pred HHHH-hhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 148 GLSA-FNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 148 ~~~~-~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
|++- ...+....++..-+.+ ++|.-.|+.+
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~ 176 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWY 176 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHH
Confidence 4333 3366667777776754 5888887765
No 233
>KOG2532|consensus
Probab=96.12 E-value=0.022 Score=44.62 Aligned_cols=97 Identities=16% Similarity=0.078 Sum_probs=61.6
Q ss_pred HhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcc--hHHHHHH--HH
Q psy10147 72 YLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVD--NLLFAVI--IS 146 (179)
Q Consensus 72 ~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~ 146 (179)
++++++.+-+ +......+..++.+.+|+++||++.| +. ...+.+..++..++.+... +.+..++ +.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r--------~v-~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~l 137 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR--------RV-FFISGLISALLTLLTPLAASIGFYLLLVLRFL 137 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch--------HH-HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHH
Confidence 5777888888 47778889999999999999999854 33 3345555555555544432 2232222 44
Q ss_pred HHH-HHhhhhchhhhhhhccch-hHHHHHHHhh
Q psy10147 147 MGL-SAFNSAGFLASHADIAPN-HAGVTFAISN 177 (179)
Q Consensus 147 ~~~-~~~~~~~~~~~~~~~~~~-~~g~~~gi~~ 177 (179)
.|+ .+..++........-.|. +|+...++..
T Consensus 138 qGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~ 170 (466)
T KOG2532|consen 138 QGLGQGVLFPAIGSILAKWAPPNERSTFIAILT 170 (466)
T ss_pred hHHHHhHHHhhhhceeeeECCHHHHHHHHHHHH
Confidence 443 334466666666666664 5887777653
No 234
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.01 E-value=0.065 Score=43.92 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 57 STYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 57 ~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+|++...+..|+++.+|++..++. ..........+..+++|+++|++..+
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~ 53 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK 53 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4678888999999999999988776 45555566677788999999987644
No 235
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=95.96 E-value=0.45 Score=37.79 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHHHHH--HhCCCcccch-------hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 53 AMNWSTYIIMQWLPTYMSS--YLGANSHSLS-------FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 53 ~~~~~~~~~~~~~p~~l~~--~~g~~~~~~g-------l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
.....+|....-+|+++.. ..+.+....| +..+..+...+..++.+++-+|+++|... .++ +.+++
T Consensus 283 ~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~---~~~--~~~G~ 357 (500)
T PRK09584 283 LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPM---PHK--FAIGM 357 (500)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCc---HHH--HHHHH
Confidence 4445666677777777664 2223322222 23333344455556666665666554221 122 33444
Q ss_pred HHhHHHHHHHhhcc---------hHHHHHH--HHHHHHH-hhhhchhhhhhhccchh-HHHHHHHh
Q psy10147 124 IGPAVFLIFFCAVD---------NLLFAVI--ISMGLSA-FNSAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 124 ~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
+..++.+....... +.++.+. +..++.. +..+...+.+.+..|++ ||...|+.
T Consensus 358 ~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~ 423 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSW 423 (500)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHH
Confidence 44444443332221 1222222 2222222 33556677788888876 99998875
No 236
>KOG2816|consensus
Probab=95.59 E-value=0.05 Score=42.65 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=75.1
Q ss_pred cHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHH-HHHHHHHhcCCchhhhHHH
Q psy10147 41 HWSLWSVYIAHFAMNWSTYI-IMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAG-HFADNLVSHSWTVLTVRRL 117 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g-~l~dr~~~r~~~~~~~r~~ 117 (179)
+|..+...+..+.......+ ..-..+.|+...+++++.+.+ +...-.....++..+.. .+...++.+ +
T Consensus 239 ~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~--------~- 309 (463)
T KOG2816|consen 239 DRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK--------R- 309 (463)
T ss_pred CccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------h-
Confidence 34455555544444333332 221457788888999999988 66666667777776766 666666543 2
Q ss_pred HHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHHHHhhhhchhhhhhhcc-chhHHHHHHHhh
Q psy10147 118 MTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGLSAFNSAGFLASHADIA-PNHAGVTFAISN 177 (179)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~gi~~ 177 (179)
....|+..-.+....+.+..+.|.... ....+.....+...+...-.. ++++|.+.++..
T Consensus 310 ~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is 372 (463)
T KOG2816|consen 310 LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIIS 372 (463)
T ss_pred HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHH
Confidence 455566665555555555555555444 333333444555555555554 455888777654
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=95.53 E-value=0.095 Score=40.11 Aligned_cols=37 Identities=22% Similarity=0.328 Sum_probs=27.8
Q ss_pred HHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 68 YMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 68 ~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
.+..+++.+..-.+ +.++++.... ..+..|+.||+..
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~ 42 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHP 42 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCc
Confidence 35566888887777 5777776544 5889999999976
No 238
>KOG0255|consensus
Probab=95.52 E-value=0.6 Score=37.13 Aligned_cols=80 Identities=10% Similarity=0.043 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcch--H---HHHHH-HHHHHHHhhhhchhhhhh
Q psy10147 89 LNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDN--L---LFAVI-ISMGLSAFNSAGFLASHA 162 (179)
Q Consensus 89 ~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~-~~~~~~~~~~~~~~~~~~ 162 (179)
.-..+....+...|+++ |+.....+.....+.++...+... . ...+. ++.+..+.+....+....
T Consensus 362 ~~~p~~~~~~~~~~~~g---------R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFG---------RRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSA 432 (521)
T ss_pred HHhhHHHHHHHHHHHhC---------cHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556677778875 445555566665555555544332 1 12222 555556666666789999
Q ss_pred hccchh-HHHHHHHhh
Q psy10147 163 DIAPNH-AGVTFAISN 177 (179)
Q Consensus 163 ~~~~~~-~g~~~gi~~ 177 (179)
|..|.. |..+.+..+
T Consensus 433 el~pt~~r~~~~~~~~ 448 (521)
T KOG0255|consen 433 ELIPTVVRNTAVGAIS 448 (521)
T ss_pred hhccHHHHHHHHHHHH
Confidence 999975 777777654
No 239
>KOG2816|consensus
Probab=95.42 E-value=0.18 Score=39.59 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH-HHHHHHHhhhhchhhhhhhcc
Q psy10147 87 YVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI-ISMGLSAFNSAGFLASHADIA 165 (179)
Q Consensus 87 ~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 165 (179)
.+...+.+++.|.++||++|| .......+...+......... .|..+. -..+......+...++++|..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk---------~~L~~~~~~~~l~~~~~~~~~-~~~~~~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK---------VVLLLPLFGTILPALCLLFQG-YWFFLLLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh---------hhHHHHHHHHHHhHHHHHHHH-HHHhhhcccccchhhhhhhhhhheeecc
Confidence 456778889999999999865 223233333222222222221 222222 222333344666788888887
Q ss_pred ch-hHHHHHHHhhc
Q psy10147 166 PN-HAGVTFAISNT 178 (179)
Q Consensus 166 ~~-~~g~~~gi~~~ 178 (179)
.+ +|....|+.+.
T Consensus 142 ~~~~R~~~~gll~~ 155 (463)
T KOG2816|consen 142 SEEERSSSIGLLSG 155 (463)
T ss_pred chhHHHHHHHHHHH
Confidence 54 48888887653
No 240
>KOG0637|consensus
Probab=95.39 E-value=0.043 Score=42.54 Aligned_cols=85 Identities=21% Similarity=0.151 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHh
Q psy10147 45 WSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGL 123 (179)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~ 123 (179)
.....+.+..-.++-.=..++|.|+++ .|.+-.-.+ .....-+.+.+..++.|..+||-..|.+. ||.++..+.
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GR----RRPfI~~~s 109 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGR----RRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccccc----ccchHHHhh
Confidence 344444444455566667899999987 588876655 23333355777889999999986555332 344455555
Q ss_pred HHhHHHHHHHh
Q psy10147 124 IGPAVFLIFFC 134 (179)
Q Consensus 124 ~~~~~~~~~~~ 134 (179)
...++.++...
T Consensus 110 ~~i~~~l~Lig 120 (498)
T KOG0637|consen 110 LLIAVSLFLIG 120 (498)
T ss_pred HHHHHHHhhhh
Confidence 55555554433
No 241
>KOG2325|consensus
Probab=95.28 E-value=0.099 Score=41.11 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=59.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHH
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSS-YLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSI 121 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~ 121 (179)
++...+..+.....+..+..-.=.|+++ +.+-+....|+ .+...++.++++++.|+.+.|.++- + ..+..
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-------k-~Pli~ 107 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-------K-KPLIV 107 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-------c-cCHHH
Confidence 4455555555555544444444456655 12333344564 6667788899999999988776531 1 22333
Q ss_pred HhHHhHHHHHHH---hhcchHHH--HHH--HHHHHHHhhhhchhhhhhhcc
Q psy10147 122 GLIGPAVFLIFF---CAVDNLLF--AVI--ISMGLSAFNSAGFLASHADIA 165 (179)
Q Consensus 122 ~~~~~~~~~~~~---~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~ 165 (179)
+.+.+.++.+++ .+.++.+. .++ +..|+........-.+.++..
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s 158 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADAS 158 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhcc
Confidence 444444443333 33333222 222 444443334555666666643
No 242
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.90 E-value=0.29 Score=38.66 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=43.2
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHH
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADN 103 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr 103 (179)
+..+|+.++.-.+-+.+...+++-+.+|......+.-+-.+.--| .-++..+.+++..+..|++..+
T Consensus 257 ~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~ 324 (511)
T TIGR00806 257 TIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIR 324 (511)
T ss_pred HHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 445677766555556666777888888888877665331122334 4566667778888888887443
No 243
>KOG2563|consensus
Probab=94.67 E-value=1 Score=35.24 Aligned_cols=40 Identities=20% Similarity=0.318 Sum_probs=27.5
Q ss_pred HHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 66 PTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 66 p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
..|.++.|| +...+- +..+..+......+.+-|+.||.|-
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GL 108 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGL 108 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccch
Confidence 345666677 333333 4667777888888889999999874
No 244
>KOG0253|consensus
Probab=94.51 E-value=0.22 Score=38.15 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 56 WSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 56 ~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.....+...+..-+++..|.+..+..+ ......+..++...+|.++|+++||
T Consensus 91 ~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr 143 (528)
T KOG0253|consen 91 AMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRR 143 (528)
T ss_pred HHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcc
Confidence 333344444555577888877777664 5566678899999999999999976
No 245
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.08 E-value=1.1 Score=29.75 Aligned_cols=86 Identities=17% Similarity=0.226 Sum_probs=45.7
Q ss_pred ch-h-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH--HHHHH-HHhhh
Q psy10147 80 LS-F-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI--ISMGL-SAFNS 154 (179)
Q Consensus 80 ~g-l-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~ 154 (179)
.| . ..+.+....+.+++.+.+.++++. |+.+.++.+.-.+....+.+. +.+..+. ...++ .+...
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~---------K~sm~lg~~~y~~y~~~~~~~-~~~~l~~~s~l~G~~~a~lW 107 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGP---------KWSMILGSLGYAIYIASFFYP-NSYTLYPASALLGFGAALLW 107 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhh---------HHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHhhhhHHhh
Confidence 46 4 666777888999999999999874 344555555554444333333 3333333 22222 22223
Q ss_pred hchhhhhhhccchh-HHHHHHH
Q psy10147 155 AGFLASHADIAPNH-AGVTFAI 175 (179)
Q Consensus 155 ~~~~~~~~~~~~~~-~g~~~gi 175 (179)
...-.++.+...++ ++.-.|+
T Consensus 108 ~aqg~ylt~~s~~~~~~~~~~i 129 (156)
T PF05978_consen 108 TAQGTYLTSYSTEETIGRNTGI 129 (156)
T ss_pred HhhhHHHHHcCCHHHHhhHHHH
Confidence 33344455555433 5555443
No 246
>KOG3810|consensus
Probab=93.49 E-value=0.14 Score=38.59 Aligned_cols=96 Identities=13% Similarity=0.135 Sum_probs=52.8
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----h-hhhhhHHHHHHHHHHHHHHHHHHHhcCCch
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSL----S-FTAMPYVLNSLFCIVAGHFADNLVSHSWTV 111 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~----g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~ 111 (179)
+..++|.++.-.+-+.+...++|-..++......+.- +..+ | .=++....++++.+..|++.-...|.
T Consensus 229 ~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~---~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~---- 301 (433)
T KOG3810|consen 229 ECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA---PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRW---- 301 (433)
T ss_pred HHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC---CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchh----
Confidence 3456777655555566666777778887777666542 2222 2 23344456677777777775443332
Q ss_pred hhhHHHHHHHHhHHhHHHHHHHhhcchHHHH
Q psy10147 112 LTVRRLMTSIGLIGPAVFLIFFCAVDNLLFA 142 (179)
Q Consensus 112 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (179)
+..++..+.+..+..++.....++.|..
T Consensus 302 ---g~~ll~~~s~~~agllf~m~~t~~Iw~~ 329 (433)
T KOG3810|consen 302 ---GDLLLAVGSAVQAGLLFIMAQTQHIWVC 329 (433)
T ss_pred ---hHHHHHHHHHHhhhhhhhhhcccceehh
Confidence 3344444444444444445555555543
No 247
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=93.15 E-value=2.2 Score=30.22 Aligned_cols=107 Identities=18% Similarity=0.205 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHhCCCc--ccch-hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhc
Q psy10147 60 IIMQWLPTYMSSYLGANS--HSLS-FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAV 136 (179)
Q Consensus 60 ~~~~~~p~~l~~~~g~~~--~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 136 (179)
......|.+..+ .+.+. ...+ ......+...++.++.|.++||.++| +. ...+..............
T Consensus 20 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~--~~~~~~~~~~~~~~~~~~ 89 (338)
T COG0477 20 LLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-------KV--LIIGLLLFLLGTLLLALA 89 (338)
T ss_pred hHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-------HH--HHHHHHHHHHHHHHHHhC
Confidence 344455555544 34443 2455 35566667777779999999998543 11 222222111111222222
Q ss_pred ch--HHHHHH--HHHHH-HHhhhhchhhhhhhccch--hHHHHHHHh
Q psy10147 137 DN--LLFAVI--ISMGL-SAFNSAGFLASHADIAPN--HAGVTFAIS 176 (179)
Q Consensus 137 ~~--~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~--~~g~~~gi~ 176 (179)
.+ .+..+. ...+. .+...+...+...+..|+ +++...+..
T Consensus 90 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (338)
T COG0477 90 PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLV 136 (338)
T ss_pred ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 22 232222 22222 223455567777887775 566665543
No 248
>KOG3098|consensus
Probab=92.58 E-value=4.3 Score=32.09 Aligned_cols=71 Identities=8% Similarity=0.021 Sum_probs=39.1
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--Cccc-chh-hhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGA--NSHS-LSF-TAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~--~~~~-~gl-~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+++++++.+.+....+.............|+.+.-.... +... .++ .....++..++....+.+++|..+.
T Consensus 235 ~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~f 309 (461)
T KOG3098|consen 235 KLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGF 309 (461)
T ss_pred HHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhc
Confidence 455678777666665555444444455556655433222 2222 122 4445556666677777788777554
No 249
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=91.43 E-value=1.9 Score=31.29 Aligned_cols=23 Identities=13% Similarity=0.231 Sum_probs=16.5
Q ss_pred CCCcHHHHhhcHHHHHHHHHHHH
Q psy10147 31 NGPRWISFISHWSLWSVYIAHFA 53 (179)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~ 53 (179)
++..+++++|++..|.-.+.+.+
T Consensus 83 ~~~s~~~~LK~K~tw~w~~~Yg~ 105 (267)
T PF07672_consen 83 KKPSYKSILKEKETWKWILIYGI 105 (267)
T ss_pred ccchHHHHHccchHHHHHHHHHH
Confidence 34668899999988876655544
No 250
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=91.21 E-value=2.4 Score=34.01 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=23.4
Q ss_pred CCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcC
Q psy10147 75 ANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 75 ~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
+++..-| +.....+...+++.++|+.+.|+-+..
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~ 324 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSF 324 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 4666556 555555667777788999988877643
No 251
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=90.86 E-value=5 Score=29.45 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=38.6
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-chhhhhhHHHHHHHHHHHHHHHHHH
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS-LSFTAMPYVLNSLFCIVAGHFADNL 104 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-~gl~~~~~~~~~ig~~~~g~l~dr~ 104 (179)
..++++.++|+.+............++....|.|. .|...+. -|+..-|.+...+|.++ +-||+
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn-----~g~~leaSLGY~InPL~~VllG~lf---lkErl 124 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN-----NGHVLEASLGYFINPLVNVLLGRLF---LKERL 124 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC-----CCchhHHHhHHHHHHHHHHHHHHHH---HHhhc
Confidence 34667788888777777666666777777777665 1222211 23555566655665553 55666
No 252
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=89.99 E-value=1.5 Score=34.18 Aligned_cols=59 Identities=19% Similarity=0.254 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHH---hcCCchhhhHHHHHHHHhHHhHHHHH
Q psy10147 65 LPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLV---SHSWTVLTVRRLMTSIGLIGPAVFLI 131 (179)
Q Consensus 65 ~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~---~r~~~~~~~r~~~~~~~~~~~~~~~~ 131 (179)
...|+++++|+++.+.. +..+.. .-....++.|.++|-+- .| ||..+.++.++......
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~-lPw~~Kp~~g~lsD~~pi~G~r-------r~~Y~~i~~~~~~~~~~ 74 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLAS-LPWSIKPLYGLLSDSFPIFGYR-------RKPYMIIGWLLGAVSAL 74 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHh-CchHHhhhHHhhcccccccCCc-------chHHHHHHHHHHHHHHH
Confidence 34568888999998865 322222 23456778999999863 33 45555555555543333
No 253
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=89.79 E-value=9 Score=30.66 Aligned_cols=93 Identities=16% Similarity=0.131 Sum_probs=46.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHh----hc-----chHHHHHH--HHHHHH
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFC----AV-----DNLLFAVI--ISMGLS 150 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~--~~~~~~ 150 (179)
+..+-.+...+..|+.+++-.|..+|...+....|.. .+++..++....+. .. .+.++.+. +.....
T Consensus 313 ~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa--~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 313 FQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFA--LGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHH--HHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 3444444555566666777677654322222334433 33333333332221 11 12333323 333222
Q ss_pred Hhh-hhchhhhhhhccchh-HHHHHHHh
Q psy10147 151 AFN-SAGFLASHADIAPNH-AGVTFAIS 176 (179)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~-~g~~~gi~ 176 (179)
-.+ .+.-.+.+.++.|++ +|...|+.
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w 418 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIY 418 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHH
Confidence 233 555678888999987 88888764
No 254
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=89.30 E-value=3.6 Score=31.24 Aligned_cols=64 Identities=14% Similarity=0.209 Sum_probs=40.1
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHH
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQ-WLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHF 100 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l 100 (179)
.++.+++||+++.+.++..++-..+|.+.. |.|. ++. .+ +..--|+ .....+..++|+.+..++
T Consensus 236 a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPa-L~~-~~-~~~P~GlIFssFM~a~MlGS~lf~~l 301 (354)
T PF05631_consen 236 AWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPA-LDP-DD-EELPLGLIFSSFMVAMMLGSSLFSRL 301 (354)
T ss_pred HHHHHHcCchhHHHHHHHHHHHHHHHHheeeeece-ecC-CC-CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 455677899999999999999999999866 7777 441 01 1112343 333444555555555433
No 255
>KOG1237|consensus
Probab=85.32 E-value=16 Score=29.84 Aligned_cols=63 Identities=13% Similarity=0.044 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.......-.+...+++++...+-.|+.+.+|.+...+. .............+++++++|-+-.
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~g 102 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLG 102 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhH
Confidence 34455556667788888888999999999999885554 3333334455667889999998854
No 256
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=84.60 E-value=17 Score=28.37 Aligned_cols=96 Identities=8% Similarity=0.059 Sum_probs=53.6
Q ss_pred HHHHHHHHHHH-hCCCcccchh--hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcch
Q psy10147 62 MQWLPTYMSSY-LGANSHSLSF--TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDN 138 (179)
Q Consensus 62 ~~~~p~~l~~~-~g~~~~~~gl--~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 138 (179)
..|+..|+.+. .|++..|..- .-.-.-...+..+....+.|.++.| ..++++.+...+...++.+.++
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk---------pviil~~~~~i~t~~lll~~~s 93 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK---------PVIILQALSYIITWLLLLFGTS 93 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHHHHHCc
Confidence 45677788876 8998887652 2222234455566788999998643 3344444444444444445554
Q ss_pred HHHHHH--HHHHHHHhhhhchhhhhhhccc
Q psy10147 139 LLFAVI--ISMGLSAFNSAGFLASHADIAP 166 (179)
Q Consensus 139 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 166 (179)
....-+ +..+.....-..+++++-...+
T Consensus 94 v~~mq~~q~~yg~~~a~evay~sYiys~v~ 123 (412)
T PF01770_consen 94 VLAMQLMQFFYGLATAAEVAYYSYIYSVVD 123 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 443322 5555444444455666665554
No 257
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=84.12 E-value=0.32 Score=39.10 Aligned_cols=57 Identities=7% Similarity=-0.016 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHH
Q psy10147 47 VYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNL 104 (179)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~ 104 (179)
+.+..+.+ ...+++..-.-+-+++.|+++..++|+ ....-++..+..++..++.+|-
T Consensus 8 ~~~~~~~q-~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~ 65 (539)
T PF03137_consen 8 LCLLGLFQ-MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG 65 (539)
T ss_dssp -----------------------------------------------------------
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 33344444 555555555555688899999999994 6667788888888888887774
No 258
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=82.21 E-value=23 Score=27.94 Aligned_cols=63 Identities=21% Similarity=0.422 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.+.+...+++..++--...+-.|.|+.+.+.-+..-.. +...-.+..++..+..|...||..|
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~R 67 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPR 67 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcc
Confidence 45677778888888888889999999998765554444 3444455666777777888888654
No 259
>KOG1479|consensus
Probab=80.88 E-value=25 Score=27.47 Aligned_cols=63 Identities=8% Similarity=0.030 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.++...+.+......+..+.+-.+.|..+..+.++ +- +.......+.+...+.-.+.-+...|
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777777778888888888887777666665 33 44555555556666666666666544
No 260
>KOG3574|consensus
Probab=78.26 E-value=6 Score=30.78 Aligned_cols=60 Identities=13% Similarity=0.217 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhh--hhHHHHHHHHHHHHHHHH-----HHHhc
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTA--MPYVLNSLFCIVAGHFAD-----NLVSH 107 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~--~~~~~~~ig~~~~g~l~d-----r~~~r 107 (179)
+++..+.+.+..+... ++...-+|.+++. .|.|-+..+ +.. .|+..- +++..+.| |+|||
T Consensus 31 ~~illLl~LYllQGiP-~GL~~~iP~lL~a-k~vSyt~~a~fS~ay~P~sLK----llWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIP-LGLIGAIPLLLQA-KGVSYTSQAIFSFAYWPFSLK----LLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhHHHHHHHHHHcCCc-hhHhhhhHHHhcC-CCcchhhhhhhhhhhhHHHHH----HHHHhhhHHHHHHhhccc
Confidence 4566677777777554 4555589998884 477776655 322 344333 34555667 77765
No 261
>KOG4686|consensus
Probab=74.27 E-value=0.17 Score=37.30 Aligned_cols=61 Identities=10% Similarity=0.099 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----cccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 43 SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGAN----SHSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~----~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
++..+.+..+.....++.+ -.|--+|.+++.+ ..+.. +..+...-+.+-+.++|++.||..
T Consensus 42 r~m~lv~mc~lgfgsyfcy--d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f 107 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCY--DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF 107 (459)
T ss_pred HHHHHHHHHHhcccceeec--CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh
Confidence 3444444444333333333 3355556555544 22333 355555566677789999999864
No 262
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.05 E-value=22 Score=22.03 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy10147 87 YVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 87 ~~~~~ig~~~~g~l~dr~~ 105 (179)
++.+.+...+.||+.||+.
T Consensus 52 fIsGilVGa~iG~llD~~a 70 (116)
T COG5336 52 FISGILVGAGIGWLLDKFA 70 (116)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 3445555556788888874
No 263
>KOG4332|consensus
Probab=69.70 E-value=2.7 Score=31.02 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=29.9
Q ss_pred HHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHhcC
Q psy10147 68 YMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVSHS 108 (179)
Q Consensus 68 ~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~r~ 108 (179)
|+-+.+|+...+.| +........++...+.|-++||.||++
T Consensus 62 yLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKr 103 (454)
T KOG4332|consen 62 YLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKR 103 (454)
T ss_pred eeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhcccc
Confidence 45566899988888 554445556666667888999999874
No 264
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=67.79 E-value=26 Score=21.64 Aligned_cols=18 Identities=17% Similarity=0.539 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy10147 56 WSTYIIMQWLPTYMSSYL 73 (179)
Q Consensus 56 ~~~~~~~~~~p~~l~~~~ 73 (179)
+++.....|+..++.+.+
T Consensus 63 FGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 63 FGYGLLIVWLTPLLARQL 80 (106)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 444445556666666543
No 265
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=67.51 E-value=10 Score=17.90 Aligned_cols=20 Identities=15% Similarity=0.398 Sum_probs=13.8
Q ss_pred hhhhHHHHHHHHHHHHHHHH
Q psy10147 83 TAMPYVLNSLFCIVAGHFAD 102 (179)
Q Consensus 83 ~~~~~~~~~ig~~~~g~l~d 102 (179)
.+.|.+.+++.+++.+|+-+
T Consensus 14 LAAP~iagIi~s~iv~w~~~ 33 (35)
T PF13940_consen 14 LAAPIIAGIIASLIVGWLRN 33 (35)
T ss_pred hHhHHHHHHHHHHHHHHHHh
Confidence 45677777777777777744
No 266
>KOG4332|consensus
Probab=66.98 E-value=51 Score=24.69 Aligned_cols=66 Identities=15% Similarity=0.226 Sum_probs=34.2
Q ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 36 ISFISHWSLWSVYIAHFAMNWSTYIIMQ-WLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
+.+.+|.++.++..+...+-..+|++.+ |-|.. .=++.++-. ...+...++++.++.-+..|+..|
T Consensus 242 ~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaL-----spn~e~iPh-GfiFatFMlASmLGSSla~Rl~s~ 308 (454)
T KOG4332|consen 242 RAIASDEKIALLGAIQSLFEGSMYTFVFLWTPAL-----SPNDEEIPH-GFIFATFMLASMLGSSLASRLLSR 308 (454)
T ss_pred HHHhcchHHHHHHHHHHHHhhhhheeeeeecccC-----CCCcccCCc-hhHHHHHHHHHHHhhHHHHHHHhc
Confidence 3456677777666666666666776644 65542 112222211 122223344455666666666544
No 267
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=65.25 E-value=40 Score=22.86 Aligned_cols=15 Identities=13% Similarity=0.311 Sum_probs=6.8
Q ss_pred CcHHHHh---hcHHHHHH
Q psy10147 33 PRWISFI---SHWSLWSV 47 (179)
Q Consensus 33 ~~~~~~~---~~~~~~~~ 47 (179)
.+|-+.| +.++-+..
T Consensus 25 L~W~~ffkLRk~rrr~~~ 42 (173)
T PF08566_consen 25 LTWNEFFKLRKSRRRINL 42 (173)
T ss_pred CCHHHHHHHHHHhhHHHH
Confidence 4555444 44444433
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=65.06 E-value=7.5 Score=30.44 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=17.3
Q ss_pred Hhhhhchhhhhhhccchh-HHHHHHHhh
Q psy10147 151 AFNSAGFLASHADIAPNH-AGVTFAISN 177 (179)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-~g~~~gi~~ 177 (179)
.+.+........++.|+. -|+..|+..
T Consensus 333 ~i~~mP~lvl~a~lcP~G~Egt~yall~ 360 (433)
T PF03092_consen 333 MIAFMPSLVLAARLCPKGSEGTVYALLA 360 (433)
T ss_pred HHHHHHHHHHHHHHCCCCchHHHHHHHH
Confidence 334445667788888875 677666553
No 269
>KOG3098|consensus
Probab=64.89 E-value=71 Score=25.54 Aligned_cols=109 Identities=13% Similarity=0.079 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCc----ccch-h-hhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHH
Q psy10147 56 WSTYIIMQWLPTYMSSYLGANS----HSLS-F-TAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVF 129 (179)
Q Consensus 56 ~~~~~~~~~~p~~l~~~~g~~~----~~~g-l-~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~ 129 (179)
.++..-.......+.....-++ ..+| + .++.+....+.+++++.+.|+++. |+.+.++...-...
T Consensus 23 ~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~---------K~~lv~ga~~y~~f 93 (461)
T KOG3098|consen 23 TAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGP---------KWALVIGATCYAAF 93 (461)
T ss_pred HhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhH---------HHHHHHHhHHHHHH
Confidence 3333334444444444443343 2366 4 677888899999999999999964 45555566555544
Q ss_pred HHHHhhcchHHHHHH--HHHHH-HHhhhhchhhhhhhccchh-HHHHHH
Q psy10147 130 LIFFCAVDNLLFAVI--ISMGL-SAFNSAGFLASHADIAPNH-AGVTFA 174 (179)
Q Consensus 130 ~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~g~~~g 174 (179)
...+.+.. .+...+ ..+|+ .++...+.-.+..+...++ ..+-++
T Consensus 94 ~~gfl~~N-~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nis 141 (461)
T KOG3098|consen 94 PLGFLFPN-SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNIS 141 (461)
T ss_pred HHHHHhcc-hHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHH
Confidence 44444443 333333 22222 2233555566666666443 444333
No 270
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=63.09 E-value=82 Score=25.65 Aligned_cols=66 Identities=8% Similarity=0.040 Sum_probs=41.8
Q ss_pred HHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 37 SFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
++++-|++..+.+.......++-.--.-...=+.| .|++.++.++ ..+.-....++.|+++.|+-+
T Consensus 273 ~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl---~~li~~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 273 KILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLAL---LVLIDFPFQIILPYYIGKWSA 338 (544)
T ss_pred HHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHH---HHHHhhhHHHHHHHHhhhhhc
Confidence 45667888777777777766665554444554555 5998887443 334445555567777777654
No 271
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.16 E-value=26 Score=23.28 Aligned_cols=12 Identities=17% Similarity=0.335 Sum_probs=6.3
Q ss_pred ccchhHHHHHHH
Q psy10147 164 IAPNHAGVTFAI 175 (179)
Q Consensus 164 ~~~~~~g~~~gi 175 (179)
-.|++.|+..|+
T Consensus 123 WD~~r~GSllG~ 134 (153)
T PF11947_consen 123 WDPEREGSLLGW 134 (153)
T ss_pred cCCCCCCCcccH
Confidence 345546665554
No 272
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=62.08 E-value=13 Score=22.44 Aligned_cols=22 Identities=18% Similarity=0.383 Sum_probs=14.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q psy10147 85 MPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 85 ~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
...+...+...+.|.+.||..|
T Consensus 83 ~~~~~~l~va~v~g~l~~~~r~ 104 (105)
T PF13493_consen 83 ITFAVFLVVALVTGYLADRYRR 104 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556666789999999854
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=56.34 E-value=1.1e+02 Score=24.80 Aligned_cols=72 Identities=6% Similarity=0.106 Sum_probs=40.0
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-c---h-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS-L---S-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-~---g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
.+.+.++++|.+..+++...+++.....+-.-.-..+.+.+. |+.+ + | +.....+...+..++++.+.+|+|
T Consensus 271 es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G 347 (491)
T PF03219_consen 271 ESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG 347 (491)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567788888887777777766665555544444555443 3333 2 2 223333444444456666665554
No 274
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=55.92 E-value=1.1e+02 Score=24.79 Aligned_cols=36 Identities=14% Similarity=0.088 Sum_probs=20.1
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHH
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRL 117 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~ 117 (179)
+.++--+.-.+..++..++.-|++++...++.-.|.
T Consensus 329 fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KF 364 (498)
T COG3104 329 FQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKF 364 (498)
T ss_pred HHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHH
Confidence 445544555666667777777766554333333443
No 275
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=54.98 E-value=80 Score=22.99 Aligned_cols=22 Identities=9% Similarity=-0.168 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q psy10147 52 FAMNWSTYIIMQWLPTYMSSYL 73 (179)
Q Consensus 52 ~~~~~~~~~~~~~~p~~l~~~~ 73 (179)
......+|+....=..|++++-
T Consensus 188 Av~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 188 AVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHHhcccchHHHHHhCc
Confidence 3334667776666566776653
No 276
>PRK03612 spermidine synthase; Provisional
Probab=51.18 E-value=1.3e+02 Score=24.40 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHH
Q psy10147 56 WSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADN 103 (179)
Q Consensus 56 ~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr 103 (179)
..-..+.......+...+|-+....++ .+....+..+|..+++++.++
T Consensus 28 ~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 28 ACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333444444455566667777766553 555666667777777666533
No 277
>KOG3574|consensus
Probab=48.92 E-value=1.3e+02 Score=23.87 Aligned_cols=51 Identities=10% Similarity=-0.023 Sum_probs=36.8
Q ss_pred HHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchhhhhh
Q psy10147 35 WISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSFTAMP 86 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl~~~~ 86 (179)
++++++-|.+...+++......++-+--...+.-+.| .|.+..+-++..++
T Consensus 258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~ 308 (510)
T KOG3574|consen 258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVP 308 (510)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeee
Confidence 3466777888777777777777777777777887777 59998886643333
No 278
>KOG0637|consensus
Probab=46.80 E-value=1.5e+02 Score=23.87 Aligned_cols=65 Identities=5% Similarity=0.201 Sum_probs=41.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCcc---------------cch-h-hhhhHHHHHHHHHHHHHHHH
Q psy10147 41 HWSLWSVYIAHFAMNWSTYIIMQWLPTYMSS-YLGANSH---------------SLS-F-TAMPYVLNSLFCIVAGHFAD 102 (179)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~---------------~~g-l-~~~~~~~~~ig~~~~g~l~d 102 (179)
.+..|...+...+.-.+++.+..|...++-+ .++=||. +.| + +++..+...+.+.+.-++.+
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667888888888878888877777766654 4554442 124 4 34444555566666666666
Q ss_pred HHH
Q psy10147 103 NLV 105 (179)
Q Consensus 103 r~~ 105 (179)
|++
T Consensus 358 ~~g 360 (498)
T KOG0637|consen 358 KFG 360 (498)
T ss_pred hcC
Confidence 666
No 279
>KOG4830|consensus
Probab=44.97 E-value=28 Score=25.76 Aligned_cols=57 Identities=14% Similarity=0.264 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHH---------HHHHhc
Q psy10147 50 AHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFA---------DNLVSH 107 (179)
Q Consensus 50 ~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~---------dr~~~r 107 (179)
..+.....--.-.+|+-.|+++. |.++.... ++.+..+.-++..++.|..+ ||+|+|
T Consensus 25 GHmlNDitAScWFTYlllfltqi-glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~ 91 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLTQI-GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRR 91 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHh-cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcce
Confidence 33333333333455666777775 88888777 56666777788888877543 566665
No 280
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.64 E-value=1e+02 Score=21.24 Aligned_cols=20 Identities=10% Similarity=0.174 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q psy10147 87 YVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 87 ~~~~~ig~~~~g~l~dr~~~ 106 (179)
.++..++..+.|++.||..+
T Consensus 92 L~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 92 LIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHhhhc
Confidence 34556677788888888754
No 281
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=44.62 E-value=76 Score=19.68 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=20.0
Q ss_pred ccch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 78 HSLS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 78 ~~~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
...| ..+...-+.++.+++.++..|+..
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~ 82 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVR 82 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcC
Confidence 3455 566666677778888899888763
No 282
>KOG1726|consensus
Probab=42.75 E-value=96 Score=22.13 Aligned_cols=39 Identities=18% Similarity=0.363 Sum_probs=27.8
Q ss_pred cHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy10147 34 RWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSY 72 (179)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~ 72 (179)
..+++.+.-..|.+..+....-...-.+..|+|.|..-.
T Consensus 28 ~i~el~~W~~YWIv~A~~t~~e~~~d~~lsw~P~Y~e~K 66 (225)
T KOG1726|consen 28 DIRELLRWMMYWIVFAALTVFETLTDFLLSWFPFYSEFK 66 (225)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 355666666677777666666666667788999998754
No 283
>PRK02237 hypothetical protein; Provisional
Probab=41.41 E-value=56 Score=20.28 Aligned_cols=26 Identities=8% Similarity=-0.178 Sum_probs=20.0
Q ss_pred ch-hhhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 80 LS-FTAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 80 ~g-l~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
+| ..+...-+.++.+++.++..|+..
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~ 84 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVR 84 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcC
Confidence 56 566677777888889999999863
No 284
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=40.94 E-value=1.9e+02 Score=23.27 Aligned_cols=73 Identities=8% Similarity=0.068 Sum_probs=37.9
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-chh----hhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS-LSF----TAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-~gl----~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
...+.++++|..+.+++...+.+.....+-.-.-..+.+.+ -|+.+ +.+ .....+...+..++++++.+|+|-
T Consensus 255 es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw 332 (472)
T TIGR00769 255 ESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGW 332 (472)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 45667888898877777666655444443332233344443 23333 222 222233344445555667666653
No 285
>PF14068 YuiB: Putative membrane protein
Probab=39.97 E-value=88 Score=19.14 Aligned_cols=23 Identities=17% Similarity=0.036 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 85 MPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 85 ~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+...+.+|..++|+..+.+.+|
T Consensus 75 ~il~~Gl~GAi~SG~tIr~LRk~ 97 (102)
T PF14068_consen 75 LILSSGLAGAIVSGITIRTLRKK 97 (102)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456778888888887776544
No 286
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=38.76 E-value=59 Score=16.75 Aligned_cols=18 Identities=22% Similarity=0.134 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy10147 89 LNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 89 ~~~ig~~~~g~l~dr~~~ 106 (179)
.+.+|..+++++.+.++.
T Consensus 3 ~GiiGa~vGg~l~~~lg~ 20 (48)
T PF04226_consen 3 LGIIGAFVGGWLFGLLGI 20 (48)
T ss_pred eehHHHHHHHHHHHHhcc
Confidence 356778888888877764
No 287
>KOG2325|consensus
Probab=38.41 E-value=2.2e+02 Score=23.14 Aligned_cols=38 Identities=11% Similarity=0.098 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch
Q psy10147 44 LWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS 81 (179)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g 81 (179)
.+.+.+..+..........+-.+.+....++++..++-
T Consensus 264 ~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av 301 (488)
T KOG2325|consen 264 VLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAV 301 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHH
Confidence 45666677777777777777777777777899877765
No 288
>KOG3626|consensus
Probab=36.48 E-value=39 Score=28.66 Aligned_cols=59 Identities=15% Similarity=0.060 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccchh-hhhhHHHHHHHHHHHHHHHHHHH
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLSF-TAMPYVLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~gl-~~~~~~~~~ig~~~~g~l~dr~~ 105 (179)
.+.+..+...+.. ++....=+-+++.++++..+.|+ ....-++..+...+..+...|..
T Consensus 101 ~l~~~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H 160 (735)
T KOG3626|consen 101 LLSLAAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH 160 (735)
T ss_pred HHHHHHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC
Confidence 3444444444433 55555555678889999999994 56666778777777788766653
No 289
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=35.63 E-value=98 Score=18.38 Aligned_cols=40 Identities=8% Similarity=0.330 Sum_probs=26.1
Q ss_pred cHHHHhhcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy10147 34 RWISFISHW--SLWSVYIAHFAMNWSTYIIMQWLPTYMSSYL 73 (179)
Q Consensus 34 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 73 (179)
.++++.+.+ ..+......+..+.++-....+.|..+....
T Consensus 6 ~f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v 47 (91)
T PF04341_consen 6 EFQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPV 47 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcc
Confidence 355666543 3455666666667777777888888876543
No 290
>KOG4830|consensus
Probab=34.47 E-value=47 Score=24.68 Aligned_cols=52 Identities=12% Similarity=0.210 Sum_probs=41.1
Q ss_pred CCCCcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch
Q psy10147 30 TNGPRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS 81 (179)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g 81 (179)
..+.+|..-+++-.+.-..+.+...-.....-..|+|.|..+..+++.+.-.
T Consensus 189 ~~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakA 240 (412)
T KOG4830|consen 189 LVRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKA 240 (412)
T ss_pred hhcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhh
Confidence 3456777778888888888888888777777888999999988888765544
No 291
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=33.33 E-value=16 Score=29.39 Aligned_cols=62 Identities=11% Similarity=0.213 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCcccch-h--hhhhHHHHHHHHHHH-HHHHHHHHhc
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSS-YLGANSHSLS-F--TAMPYVLNSLFCIVA-GHFADNLVSH 107 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~~~~~~g-l--~~~~~~~~~ig~~~~-g~l~dr~~~r 107 (179)
.+.+.++.+.........-.|..+++ ..+.|-.+.| + ...|+-.-.+-+|+. ...+.|+|||
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRR 70 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRR 70 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCc
Confidence 34455556555444444678998887 2355655655 3 445665555544332 3444455554
No 292
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=32.10 E-value=1.7e+02 Score=20.07 Aligned_cols=21 Identities=5% Similarity=0.224 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q psy10147 87 YVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 87 ~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+...++.++++++..|+.||
T Consensus 162 ~~~~~v~a~lG~~lG~kllkK 182 (186)
T PF09605_consen 162 IIITFVGALLGALLGKKLLKK 182 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345667777888887777654
No 293
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=31.99 E-value=1.2e+02 Score=18.29 Aligned_cols=11 Identities=27% Similarity=0.072 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q psy10147 91 SLFCIVAGHFA 101 (179)
Q Consensus 91 ~ig~~~~g~l~ 101 (179)
.++..+.+.+.
T Consensus 101 ~~~~~~~~~~~ 111 (141)
T TIGR00880 101 LLGPPLGGVLA 111 (141)
T ss_pred HHhHHhHHHHh
Confidence 33333334333
No 294
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=31.79 E-value=2.6e+02 Score=22.05 Aligned_cols=42 Identities=7% Similarity=0.161 Sum_probs=20.0
Q ss_pred cchHHHHHH--HHHHHHH-hhhhchhhhhhhcc-chhHHHHHHHhh
Q psy10147 136 VDNLLFAVI--ISMGLSA-FNSAGFLASHADIA-PNHAGVTFAISN 177 (179)
Q Consensus 136 ~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~-~~~~g~~~gi~~ 177 (179)
.++.|..++ +.-|+.| ..+...+..+.+-. +++|-.+.|..+
T Consensus 332 ipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vs 377 (402)
T PF02487_consen 332 IPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVS 377 (402)
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 345555444 3333333 33444444444444 455777666543
No 295
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=30.08 E-value=1.8e+02 Score=19.64 Aligned_cols=18 Identities=11% Similarity=0.248 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy10147 90 NSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 90 ~~ig~~~~g~l~dr~~~r 107 (179)
..+.....+....|..++
T Consensus 146 ~~~w~~~~~~~~~~~~~~ 163 (191)
T PF01810_consen 146 SLLWFLLLALLGSRLRRK 163 (191)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333334445555555443
No 296
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=29.64 E-value=3.1e+02 Score=22.36 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=21.4
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWT 110 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~ 110 (179)
......+.+.++..+++++-..++.+.+.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 35556667788888999999988866443
No 297
>TIGR00949 2A76 The Resistance to Homoserine/Threonine (RhtB) Family protein.
Probab=28.35 E-value=1.9e+02 Score=19.43 Aligned_cols=10 Identities=10% Similarity=-0.091 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q psy10147 95 IVAGHFADNL 104 (179)
Q Consensus 95 ~~~g~l~dr~ 104 (179)
...+++..+.
T Consensus 148 ~~~~~~~~~~ 157 (185)
T TIGR00949 148 YVLSLIFSRP 157 (185)
T ss_pred HHHHHHHccH
Confidence 3444454444
No 298
>TIGR03061 pip_yhgE_Nterm YhgE/Pip N-terminal domain. This family contains the N-terminal domain of a family of multiple membrane-spanning proteins of Gram-positive bacteria. One member was shown to be a host protein essential for phage infection, so many members of this family are called "phage infection protein". A separate model, TIGR03062, represents the conserved C-terminal domain. The domains are separated by regions highly variable in both length and sequence, often containing extended heptad repeats as described in model TIGR03057.
Probab=26.24 E-value=1.7e+02 Score=19.29 Aligned_cols=17 Identities=18% Similarity=-0.052 Sum_probs=11.8
Q ss_pred HHHHhhcHHHHHHHHHH
Q psy10147 35 WISFISHWSLWSVYIAH 51 (179)
Q Consensus 35 ~~~~~~~~~~~~~~~~~ 51 (179)
+++++++|..|..++..
T Consensus 3 ~~~~~r~~~~~~~li~~ 19 (164)
T TIGR03061 3 LKRLRKNKLLRIALIAI 19 (164)
T ss_pred HHHhhcCcHHHHHHHHH
Confidence 67889999877554333
No 299
>PF04547 Anoctamin: Calcium-activated chloride channel; InterPro: IPR007632 This family contains the anoctamin/TMEM16 proteins which are thought to be calcium-dependent chloride channel [].
Probab=25.94 E-value=3.4e+02 Score=21.52 Aligned_cols=44 Identities=11% Similarity=0.238 Sum_probs=22.0
Q ss_pred CcHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy10147 33 PRWISFISHWSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGAN 76 (179)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~ 76 (179)
.++++.++.-..+...+...+...+......++-.++.+.+.-+
T Consensus 113 p~~~r~~r~~~s~~ivl~~i~i~~~~~~~~~~~~~~~~~~~~~~ 156 (452)
T PF04547_consen 113 PPWKRILRYLVSVPIVLLFILIVIGIVIGVFYLRIYLTEIYSGP 156 (452)
T ss_pred cHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34555555433333333334444444445556666676665533
No 300
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=25.91 E-value=3.6e+02 Score=21.80 Aligned_cols=61 Identities=10% Similarity=0.217 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-----ch-hhhhhHHHHHH-HHHHHHHHHHHHHhc
Q psy10147 42 WSLWSVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHS-----LS-FTAMPYVLNSL-FCIVAGHFADNLVSH 107 (179)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~-----~g-l~~~~~~~~~i-g~~~~g~l~dr~~~r 107 (179)
++++...+..+|....++.. --+.|.+..+... .. +-....+...+ ..++.+++++|+.++
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~ 74 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKE 74 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 34555555555554443322 2256666664332 22 21112222333 367889999998765
No 301
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=25.34 E-value=1.3e+02 Score=16.63 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHhCCC
Q psy10147 61 IMQWLPTYMSSYLGAN 76 (179)
Q Consensus 61 ~~~~~p~~l~~~~g~~ 76 (179)
...|...|+...-|..
T Consensus 24 tigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 24 TIGYFQTYLESAAGIK 39 (73)
T ss_pred hHHHHHHHHHhccCCe
Confidence 3445566666654443
No 302
>KOG2601|consensus
Probab=25.32 E-value=3.5e+02 Score=21.56 Aligned_cols=61 Identities=11% Similarity=0.226 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccch-hhhhhHHHHHHHHHHHHHHHHHHHh
Q psy10147 46 SVYIAHFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-FTAMPYVLNSLFCIVAGHFADNLVS 106 (179)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l~~~~~~~~~ig~~~~g~l~dr~~~ 106 (179)
.+.+.++...++--.-.+-...|+.+-.|=|..-.. +..+-.....+..++.|...|+..|
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr 92 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSR 92 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhH
Confidence 344455555555544455556667665553333223 2222233344444445555566544
No 303
>COG2715 SpmA Uncharacterized membrane protein, required for spore maturation in B.subtilis. [General function prediction only]
Probab=24.33 E-value=1.8e+02 Score=20.03 Aligned_cols=46 Identities=22% Similarity=0.328 Sum_probs=29.7
Q ss_pred HHHHHHHHHHH-hCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHhc
Q psy10147 62 MQWLPTYMSSY-LGANSHSLSFTAMPYVLNSLFCIVAGHFADNLVSH 107 (179)
Q Consensus 62 ~~~~p~~l~~~-~g~~~~~~gl~~~~~~~~~ig~~~~g~l~dr~~~r 107 (179)
.+.+|+-.... .++...+-.....|.+.....+-++|.++||+..|
T Consensus 143 itLiPtTVi~iR~a~gs~~ptdI~~ptilaT~~s~~~gii~~~~~qr 189 (206)
T COG2715 143 ITLIPTTVISIRMAYGSKNPTDIFLPTILATVCSTIAGIIAVALLQR 189 (206)
T ss_pred eeeecHHHHHHHHHhcCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456544433 34444433346678878888888899999998754
No 304
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=24.33 E-value=2.7e+02 Score=19.87 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHhHHhHHHHHHHhhcchHHHHHH
Q psy10147 89 LNSLFCIVAGHFADNLVSHSWTVLTVRRLMTSIGLIGPAVFLIFFCAVDNLLFAVI 144 (179)
Q Consensus 89 ~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (179)
++.+|..+..++.||+. +.....++++...+..-......+....++
T Consensus 15 G~iiG~l~~~klper~k---------~~l~~~~Gl~~l~iGI~m~~~~~n~~~~il 61 (228)
T COG1811 15 GGIIGLLIGKKLPERIK---------DILMQCLGLAILGIGIKMALQAKNDIMILL 61 (228)
T ss_pred HHHHHHHHcccCcHHHH---------HHHHHHHHHHHHHHHHHHHHhcCccHHHHH
Confidence 34444444444555542 233344455544444433334444444433
No 305
>KOG1277|consensus
Probab=24.20 E-value=1.3e+02 Score=24.22 Aligned_cols=36 Identities=8% Similarity=0.103 Sum_probs=20.9
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcCCchhhhHHH
Q psy10147 82 FTAMPYVLNSLFCIVAGHFADNLVSHSWTVLTVRRL 117 (179)
Q Consensus 82 l~~~~~~~~~ig~~~~g~l~dr~~~r~~~~~~~r~~ 117 (179)
+.....+..++.+++.|+.+..+-+|.+.++.+|..
T Consensus 328 l~saaI~vYAlTs~i~GY~~gs~Y~r~gG~~Wik~m 363 (593)
T KOG1277|consen 328 LLSAAIVVYALTSPINGYVSGSFYARLGGRRWIKNM 363 (593)
T ss_pred HHHHHHHHHHhcccccccccceeeehhccHHHHHHH
Confidence 444444567777788888877665554433333443
No 306
>PRK02935 hypothetical protein; Provisional
Probab=23.29 E-value=2e+02 Score=17.88 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=9.8
Q ss_pred HHHHHHHHhHHhHHHHHHHhh
Q psy10147 115 RRLMTSIGLIGPAVFLIFFCA 135 (179)
Q Consensus 115 r~~~~~~~~~~~~~~~~~~~~ 135 (179)
|.+.+....++..+......+
T Consensus 13 Rt~aL~lvfiG~~vMy~Giff 33 (110)
T PRK02935 13 RTFALSLVFIGFIVMYLGIFF 33 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 555554444444444444333
No 307
>COG1280 RhtB Putative threonine efflux protein [Amino acid transport and metabolism]
Probab=23.02 E-value=2.7e+02 Score=19.39 Aligned_cols=14 Identities=21% Similarity=0.662 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHhC
Q psy10147 61 IMQWLPTYMSSYLG 74 (179)
Q Consensus 61 ~~~~~p~~l~~~~g 74 (179)
+...+|.+.....+
T Consensus 131 ~la~~pqfv~~~~~ 144 (208)
T COG1280 131 FLAFLPQFVDPGAG 144 (208)
T ss_pred HHHHHhhhcCCCCc
Confidence 45566776665433
No 308
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=23.00 E-value=3.9e+02 Score=21.22 Aligned_cols=123 Identities=9% Similarity=0.019 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcccch-h-hhhhHH---------HHHHHHHHHHHHHHHHHhcCCchhhhHHHHH
Q psy10147 51 HFAMNWSTYIIMQWLPTYMSSYLGANSHSLS-F-TAMPYV---------LNSLFCIVAGHFADNLVSHSWTVLTVRRLMT 119 (179)
Q Consensus 51 ~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~g-l-~~~~~~---------~~~ig~~~~g~l~dr~~~r~~~~~~~r~~~~ 119 (179)
+....+.+..+.+ .|.|+++.+..+..... . .....- ...+..++...+.-+..+|.....+....+.
T Consensus 5 G~~~L~pWN~fit-A~~Yf~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv 83 (437)
T TIGR00939 5 GVGVLLPWNAFIT-APQYFIEYYKYAQNIPEAIPSSSKMWKHFNTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLV 83 (437)
T ss_pred eeeccchhHHHhh-HHHHHHHHhccCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHH
Q ss_pred HHHhHHhHHHHHHHhhcchHHHHHH------HHHHHHHhhhhchhhhhhhccchh-HHHHHH
Q psy10147 120 SIGLIGPAVFLIFFCAVDNLLFAVI------ISMGLSAFNSAGFLASHADIAPNH-AGVTFA 174 (179)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g 174 (179)
...++......+.....+......+ +.....+...+...+.+....|++ .+...|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~~~~~a~~~G 145 (437)
T TIGR00939 84 ILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGLAGVFPSTYSSAVMSG 145 (437)
T ss_pred HHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhhcccCCHHHHHHHHhc
No 309
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=22.35 E-value=3e+02 Score=19.72 Aligned_cols=15 Identities=33% Similarity=0.388 Sum_probs=6.8
Q ss_pred HHHHHHhHHhHHHHH
Q psy10147 117 LMTSIGLIGPAVFLI 131 (179)
Q Consensus 117 ~~~~~~~~~~~~~~~ 131 (179)
....++++...+..-
T Consensus 33 l~~~~Gl~~l~iGi~ 47 (226)
T PF04474_consen 33 LMQALGLCVLAIGIS 47 (226)
T ss_pred HHHHhhHHHHHHHHH
Confidence 344445554444443
No 310
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=21.71 E-value=2.2e+02 Score=17.89 Aligned_cols=17 Identities=35% Similarity=0.460 Sum_probs=7.2
Q ss_pred HHHHHHHHhHHhHHHHH
Q psy10147 115 RRLMTSIGLIGPAVFLI 131 (179)
Q Consensus 115 r~~~~~~~~~~~~~~~~ 131 (179)
|.+.+...+++..+...
T Consensus 12 R~~al~lif~g~~vmy~ 28 (114)
T PF11023_consen 12 RTFALSLIFIGMIVMYI 28 (114)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 54444444444443333
No 311
>PF05052 MerE: MerE protein; InterPro: IPR007746 The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon often located on plasmids or transposons [, ]. It has been suggested that MerE is a broad mercury transporter mediating transport across the bacterial membrane [].
Probab=21.18 E-value=55 Score=18.64 Aligned_cols=10 Identities=40% Similarity=0.630 Sum_probs=4.7
Q ss_pred CCCCCCCCCC
Q psy10147 1 MSSPDVEPVS 10 (179)
Q Consensus 1 ~~~p~~~~~e 10 (179)
|++||..+.|
T Consensus 1 m~~p~~~p~e 10 (75)
T PF05052_consen 1 MNSPERLPPE 10 (75)
T ss_pred CCCcccCChh
Confidence 4555554433
No 312
>COG4591 LolE ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]
Probab=21.02 E-value=3.2e+02 Score=21.61 Aligned_cols=9 Identities=22% Similarity=0.523 Sum_probs=5.4
Q ss_pred hCCCcccch
Q psy10147 73 LGANSHSLS 81 (179)
Q Consensus 73 ~g~~~~~~g 81 (179)
+|.++.+.-
T Consensus 308 mGa~~~~I~ 316 (408)
T COG4591 308 MGASPSHIM 316 (408)
T ss_pred cCCChHHHH
Confidence 467666544
No 313
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=20.09 E-value=1.5e+02 Score=15.43 Aligned_cols=18 Identities=17% Similarity=0.185 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy10147 88 VLNSLFCIVAGHFADNLV 105 (179)
Q Consensus 88 ~~~~ig~~~~g~l~dr~~ 105 (179)
++..+.....|+..|+.-
T Consensus 11 ~~~i~~g~~~G~~lD~~~ 28 (55)
T PF09527_consen 11 AAPILVGFFLGYWLDKWF 28 (55)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 445555566777777764
Done!