RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10158
(1266 letters)
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET:
ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A*
3t9d_A* 3t9e_A* 3t9f_A* 3t54_A* 3t99_A*
Length = 330
Score = 526 bits (1357), Expect = e-178
Identities = 248/329 (75%), Positives = 291/329 (88%), Gaps = 1/329 (0%)
Query: 45 CEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQ-KPVDEWPIVDCL 103
+Q++VG+C+MAKKS+SKPMKEIL R+ F++I ++VF EE I +PV+ WP+ DCL
Sbjct: 2 SFTERQIVVGICSMAKKSKSKPMKEILERISLFKYITVVVFEEEVILNEPVENWPLCDCL 61
Query: 104 ISFHSKGFPLEKAIKYANLRKPFVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRE 163
ISFHSKGFPL+KA+ YA LR PFVIN+LNMQY IQDRR+VY++L+ EGI +PRYA+L+R+
Sbjct: 62 ISFHSKGFPLDKAVAYAKLRNPFVINDLNMQYLIQDRREVYSILQAEGILLPRYAILNRD 121
Query: 164 SPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGS 223
+P + L+E EDHVEVNG VF KPFVEKPVSAEDHN+YIYYPTSAGGGSQRLFRKIGS
Sbjct: 122 PNNPKECNLIEGEDHVEVNGEVFQKPFVEKPVSAEDHNVYIYYPTSAGGGSQRLFRKIGS 181
Query: 224 RSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 283
RSSVYSPES VRK+GS+IYE+FMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG
Sbjct: 182 RSSVYSPESNVRKTGSYIYEEFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEG 241
Query: 284 KEIRYPVILSNAEKLISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYDD 343
KE+RYPVIL+ EKLI+ KVCLAFKQTVCGFDLLRANG+S+VCDVNGFSFVKNS KYYDD
Sbjct: 242 KEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVCDVNGFSFVKNSMKYYDD 301
Query: 344 SAKILGNMILRELAPTLHIPWSVPFQLDD 372
AKILGN+++RELAP HIPWS+P + +D
Sbjct: 302 CAKILGNIVMRELAPQFHIPWSIPLEAED 330
>1z2n_X Inositol 1,3,4-trisphosphate 5/6-kinase; inositol phosphate kinase,
ATP-grAsp, transferase; HET: ADP; 1.20A {Entamoeba
histolytica} PDB: 1z2o_X* 1z2p_X*
Length = 324
Score = 134 bits (338), Expect = 1e-34
Identities = 47/333 (14%), Positives = 95/333 (28%), Gaps = 82/333 (24%)
Query: 43 PCCEEGKQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDC 102
+ V + + K + ++ +F + + T+ + +
Sbjct: 4 GSMTTKQTVSLFIWLPESKQK----TLFISTKNHTQFELNNIIFDVTLSTELPDKEPNAI 59
Query: 103 LISF-HSKGFPLEKAIKYANLRKPF-VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVL 160
+ H G ++ KY + + + + R ++ ALL K I IP +
Sbjct: 60 ITKRTHPVGKMADEMRKYEKDHPKVLFLESSAIHDMMSSREEINALLIKNNIPIPNSFSV 119
Query: 161 DRESPDPVKHELVESEDHVEVNGIVFNKPFVEKPV----SAEDHNIYIYYPTSAGGGSQR 216
+ E ++ ++ PF+ KP + H + I
Sbjct: 120 KSKE---------EVIQLLQSKQLIL--PFIVKPENAQGTFNAHQMKI------------ 156
Query: 217 LFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKS------ 270
V E + + ++ + VKV+ +G + + R S
Sbjct: 157 ----------VLEQEGIDDIHFPCLCQHYINHNNKIVKVFCIG-NTLKWQTRTSLPNVHR 205
Query: 271 -------------------PALDGKVERDSEGKEIRYPVILSNAE-----------KLIS 300
P + E R+ + + ++
Sbjct: 206 CGIKSVDFNNQHLEDILSWPEGVIDKQDIIENSANRFGSKILEDPILLNLTSEAEMRDLA 265
Query: 301 RKVCLAFKQTVCGFDLLRAN--GKSFVCDVNGF 331
KV A +CG D ++ N G V DVN F
Sbjct: 266 YKVRCALGVQLCGIDFIKENEQGNPLVVDVNVF 298
>2q7d_A Inositol-tetrakisphosphate 1-kinase; inositol kinase, ITPK1,
inositol 1,3,4-5/6 phosphate, inositol phosphate,
inositolphosphate; HET: ANP; 1.60A {Homo sapiens} PDB:
2qb5_A* 2odt_X
Length = 346
Score = 118 bits (297), Expect = 7e-29
Identities = 51/342 (14%), Positives = 109/342 (31%), Gaps = 59/342 (17%)
Query: 53 VGVCAMAKKSQSKPMKEILTRLEE--FEFIKMIVFSEETIQKPVD------EWPIVDCLI 104
VG KK + + + E +++ + Q P+D I++
Sbjct: 21 VGYWLSEKKIKKLNFQAFAELCRKRGMEVVQLNLSRPIEEQGPLDVIIHKLTDVILEADQ 80
Query: 105 SFHSKGFPLEKAIKYANLRKPF-VINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRE 163
+ + + +Y + V++ L + DR K Y L+ K + +
Sbjct: 81 NDSQSLELVHRFQEYIDAHPETIVLDPLPAIRTLLDRSKSYELIRKIEAYMEDDRICSPP 140
Query: 164 SPDPVKHELVESEDHVEVNGIVFNKPFVEKPVSAED---HNIYIYYPTSAGGGSQRLFRK 220
+ ++ +E NG+ F PF+ K A H + I
Sbjct: 141 FMELTSLCGDDTMRLLEKNGLTF--PFICKTRVAHGTNSHEMAI---------------- 182
Query: 221 IGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALD------ 274
V++ E + ++F+ + KV+ VG Y +
Sbjct: 183 ------VFNQEGLNAIQPPCVVQNFINHNAVLYKVFVVGESYTVVQRPSLKNFSAGTSDR 236
Query: 275 -------------GKVERDSEGKEIRYPVILSNAEKL--ISRKVCLAFKQTVCGFDLLRA 319
+E +I + E + +SR + A ++ G D++
Sbjct: 237 ESIFFNSHNVSKPESSSVLTELDKIEGVFERPSDEVIRELSRALRQALGVSLFGIDIIIN 296
Query: 320 N--GKSFVCDVNGFSFVKNSNKYYDDSAKILGNMILRELAPT 359
N G+ V D+N F + ++++ D + ++ +
Sbjct: 297 NQTGQHAVIDINAFPGYEGVSEFFTDLLNHIATVLQGQSTAM 338
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 72.6 bits (177), Expect = 7e-13
Identities = 95/650 (14%), Positives = 185/650 (28%), Gaps = 190/650 (29%)
Query: 241 IYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLIS 300
I F + V D + + E I ++ +A
Sbjct: 21 ILSVFEDAFVDNFDCKDV-QDMPKS-----------ILSKEEIDHI---IMSKDAVSGTL 65
Query: 301 RKVCLAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNS-NKYYD-DSAKILGNMILRELAP 358
R L F L + + V FV+ Y + I +
Sbjct: 66 R---L--------FWTLLSKQEEMV-----QKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 359 TLHIPWSVPFQLDDPPFVPTTFG----------KMMELRCVVAVIRHGDR-TPKQKMKVE 407
++I D+ F ++ELR V+ G + K + ++
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169
Query: 408 V-----RHPKF-FEIFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNS---ADPE 458
V K F+IF+ + LK + VL++ + LL +I+ N +D
Sbjct: 170 VCLSYKVQCKMDFKIFW---------LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 459 IEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKEPSLVL 518
K ++ ++ L +K +P L L
Sbjct: 221 SNIKL-RIHSIQAELRRL-----------LKSKPYEN-------------------CL-L 248
Query: 519 ILK--WGGELTPAGRIQAEEL-----GRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYAS 571
+L + A + + L +V + H + H
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFL--------SAATTTHISLDHHSMTLTP 300
Query: 572 DEGRVQMTAAAFAKGLLALEGEL-------TPILVQMVKSANTNGL--LDN--DSDASKH 620
DE + K L +L P + ++ + +GL DN + K
Sbjct: 301 DE-----VKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 621 QNIVKAKLHDL---LQRDR-----TFTPEDRDKVN-PCNATSI-------NIAMDFVKNP 664
I+++ L+ L R F P + P S+ + M V
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVF-PPS---AHIPTILLSLIWFDVIKSDVMVVVN-- 409
Query: 665 VQCCKR-----------IHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIE 713
+ K I I + ++ KLE+ S+ ++
Sbjct: 410 -KLHKYSLVEKQPKESTIS--IPSIYLELKVKLENEYALHRSI---------------VD 451
Query: 714 KDFCMKNYKY-DISKIPD---IYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQE 769
K + D+ Y I + L++ +H + ++L+ +++ +
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS 511
Query: 770 YGMTMSEKL--TISQ------GICV--PLLKKIRADLQRNVEESEENVNR 809
S + T+ Q IC P +++ + + + EEN+
Sbjct: 512 TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLIC 561
Score = 64.1 bits (155), Expect = 3e-10
Identities = 96/640 (15%), Positives = 191/640 (29%), Gaps = 202/640 (31%)
Query: 429 KLKKPKQLQEVLDIARMLLT--EIEN--NSADPE---------IEEKQGKLEQ--LKGVL 473
++V D+ + +L+ EI++ S D + KQ ++ Q ++ VL
Sbjct: 28 AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL 87
Query: 474 EM-YGHFSGINRKVQMKYQPKGRPRGSSSDEEEED-------------VCKPKEPSLVLI 519
+ Y +K + + + E+ D V + + L
Sbjct: 88 RINYKFLMS-----PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ---PYLK 139
Query: 520 LK-WGGELTPAGRIQAEELGRVFRCMYPGGQG------NGLGLLRLHSTFRHDLKIY--- 569
L+ EL PA + + G + G G + ++ D KI+
Sbjct: 140 LRQALLELRPAKNVLID--G-----V--LGSGKTWVALDVCLSYKVQCKM--DFKIFWLN 188
Query: 570 ----ASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVK 625
S E ++M L L ++ P N D+ S+ + ++
Sbjct: 189 LKNCNSPETVLEM--------LQKLLYQIDP---------NWTSRSDHSSNIKLRIHSIQ 231
Query: 626 AKLHDLLQRDRTFTPEDR-----DKVNPCNATSINIAMDFVKNPVQCCK-----RIHELI 675
A+L LL+ P + V NA + N A + CK R ++
Sbjct: 232 AELRRLLKS----KPYENCLLVLLNV--QNAKAWN-AFNLS------CKILLTTRFKQVT 278
Query: 676 HVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIE---------------------- 713
L + +L E L+ ++
Sbjct: 279 DFLSAATTTHISLDH-HSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNPRRLSIIAES 336
Query: 714 -KDFCM--KNYK-YDISKIPDIYDCIKYDLQHNQHTVQFDQAE--ELYLN-AKYMADIVI 766
+D N+K + K+ I I+ L + AE +++ + + I
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTI---IESSLN------VLEPAEYRKMFDRLSVFPPSAHI 387
Query: 767 PQE------YGMTMSEKLTISQGICVP-LLKKIRA-------DLQRNVEESEENV----N 808
P + + S+ + + + L++K + ++ EN
Sbjct: 388 PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
Query: 809 RLNPQYSHGVSSPGRHV---RTRLYFTSESHI--HSLLTVLRYGGLTESVHMN-----DE 858
+ Y+ + + YF S HI H L+ E + + D
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYS--HIGHH-----LKNIEHPERMTLFRMVFLDF 500
Query: 859 QWMRA------MEYVSMVSELNYMSQVVIMLYED--PTKDPTSDERFHIELHFSPGVNCC 910
+++ + + S LN + Q + Y+ DP + + L F P +
Sbjct: 501 RFLEQKIRHDSTAWNASGSILNTLQQ--LKFYKPYICDNDPKYERLVNAILDFLPKIE-- 556
Query: 911 VQKNLPPGPGFRPHSRNDQKKNLPRID-QEDTEFYSTDAE 949
+ + +L RI + E +A
Sbjct: 557 ------------ENLICSKYTDLLRIALMAEDEAIFEEAH 584
Score = 55.2 bits (132), Expect = 1e-07
Identities = 61/381 (16%), Positives = 122/381 (32%), Gaps = 97/381 (25%)
Query: 658 MDFVKNPVQ-CCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDF 716
MDF Q K I L +++ CK+ ++ SK E D
Sbjct: 7 MDFETGEHQYQYKDI------LSVFEDAFVDNFDCKDVQ-------DMPKSILSKEEIDH 53
Query: 717 CMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSE 776
+ + K +S ++ + L + VQ E L +N K++ + ++ +M
Sbjct: 54 IIMS-KDAVSGTLRLFWTL---LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109
Query: 777 KLTISQGICVPLLKKIRADLQRNVEE-SEENVNRLNPQYSHGVSSPGRHVRTRLYFTSES 835
++ I Q R L + + ++ NV+RL P +R L E
Sbjct: 110 RMYIEQ----------RDRLYNDNQVFAKYNVSRLQPYLK---------LRQALL---EL 147
Query: 836 HIHSLLTVLRYG--G-----LTESVHMNDEQWMRAME----YVSMVSELNYMSQVVIMLY 884
+ + G G + V + M+ ++++ N V+ ML
Sbjct: 148 RPAKNVLI--DGVLGSGKTWVALDV-CLSYKVQCKMDFKIFWLNL-KNCNSPETVLEML- 202
Query: 885 EDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNL------PR--- 935
++ P N + + R HS + + L
Sbjct: 203 ----------QKLL--YQIDP--NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 936 I--DQEDTEFYSTDAEDN------TGSSKSTSDQDSPTSAEGPSVDQSKGKF-------V 980
+ + ++ + + +A + T K +D S + S+D +
Sbjct: 249 VLLNVQNAKAW--NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
Query: 981 LSQPIPITVKDLKRKNSVGDP 1001
L + + +DL R+ +P
Sbjct: 307 LLKYLDCRPQDLPREVLTTNP 327
Score = 48.3 bits (114), Expect = 2e-05
Identities = 75/565 (13%), Positives = 147/565 (26%), Gaps = 174/565 (30%)
Query: 740 QHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQ-R 798
H+ H + F+ E Y ++ + +
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSV------------------------FEDAFVDNFDCK 36
Query: 799 NVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHMNDE 858
+V++ +++ + H + S T F T+L E V
Sbjct: 37 DVQDMPKSILS-KEEIDHIIMSKDAVSGTLRLFW---------TLLSKQ--EEMVQ---- 80
Query: 859 QWMRAMEYVSMVSELNY---MSQVVIMLYEDPTKDPTSDERFHIELHFSPGVNCCVQKNL 915
++V V +NY MS + + P+ R +IE +
Sbjct: 81 ------KFVEEVLRINYKFLMSP-----IKTEQRQPSMMTRMYIE---------QRDRLY 120
Query: 916 PPGPGFRPHSRNDQKKNLPRIDQED---TEFYSTDAEDN------TGSSKSTSDQDSPTS 966
F + N+ R+ N GS K+ +
Sbjct: 121 NDNQVFAKY-------NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW------VA 167
Query: 967 AEGPSVDQSKGKFVLSQPIPI---TVKDLKRKNSVGDP----C----PSIVAPEGHPYRR 1015
+ V S K I +K+ +V + P+ + H
Sbjct: 168 LD---VCLSY-KVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223
Query: 1016 PRSPNE-EQRSRSYDQQHQRPKG--------ASKCCE---GNCR-----HRHSISGQMCY 1058
+ + R + +K +C+ ++ +
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTD---F 280
Query: 1059 LKNSTGYGFR---RGLALSSSSGNSLFSTAVISGSSSAPNLRNMIPSTTNVTALDGFGGV 1115
L +T + L+ SL + +L + TTN L
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYL---DCRPQDLPREV-LTTNPRRLSIIA-- 334
Query: 1116 PSIRPLETLHNALSLKHLDNFL----GKMIRVIPSKTPASSPPKY-----------PSTP 1160
E++ + L+ DN+ K+ +I S P +Y PS
Sbjct: 335 ------ESIRDGLA--TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 1161 I-EHSLSGARLGWSGPPSFVSESGPSSPNALSDYFFKSGLNTSDSCSSEFSSSRSSVPSS 1219
I LS + W + + K L S S+PS
Sbjct: 387 IPTILLS--LI-WFDVIKSDVMV-------VVNKLHKYSLVEKQPK-----ESTISIPSI 431
Query: 1220 EVDIRDPGGDVTPMSDMDHDVTVVE 1244
++++ + + H ++V+
Sbjct: 432 YLELKVKLENEYAL----HR-SIVD 451
Score = 46.8 bits (110), Expect = 5e-05
Identities = 89/693 (12%), Positives = 195/693 (28%), Gaps = 200/693 (28%)
Query: 131 LNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPF 190
+ + + +++ L + E+ + V + + ++ + S E P
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN---YKFLMSPIKTEQRQ-----P- 105
Query: 191 VEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPE--SRVRKSGSFIYEDFMPT 248
+ +YI +Q +F K +V + ++R++ + E
Sbjct: 106 ------SMMTRMYIEQRDRLYNDNQ-VFAKY----NVSRLQPYLKLRQA---LLEL---R 148
Query: 249 DGTDVKVYTV---GPDYAHAEARKSPALDGKVERDSEGKEIR-YPVILSNAEKLISRKVC 304
+V + V G K+ + V + + + + N + S +
Sbjct: 149 PAKNVLIDGVLGSG---------KT-WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV 198
Query: 305 LAFKQTVCGFDLLRANGKSFVCDVNGFSFVKNSNKYYD--DSAKILGNMIL--RELAPTL 360
L Q + + D N S +S+ S + +L + L
Sbjct: 199 LEMLQKLL-----------YQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 361 HIPWSVPFQLDDPPFV--PTTFGKMMELRCVVAVI-RHGDRT-----PKQKMKVEVRHPK 412
+ L + V + L C + + R T H
Sbjct: 248 LV-------LLN---VQNAKAW-NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 413 FF------EIFYKYGGQNDGHVKLKKPKQL-QEVLDIARMLLTEI-ENNSADPEIEE--K 462
+ KY +P+ L +EVL L+ I E+ + K
Sbjct: 297 TLTPDEVKSLLLKYLDC--------RPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 463 QGKLEQLKGVLEM-YGHFS-GINRKVQMKYQ-----PKGRPRGSSSDEEEEDVCKPKEPS 515
++L ++E RK+ + P P+
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKM---FDRLSVFP-------------PSA---HIPT 389
Query: 516 LVLILKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGR 575
++L L W + + +L + + + + S + +LK+ +
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHK--YSLVEKQPKE--STISIPSIYL-ELKVKLEN--- 441
Query: 576 VQMTAAAFAKGLLALEGELTPILV---QMVKSANTNGLLDNDSDASKHQNIVKAKLHDLL 632
E L +V + K+ +++ L+ D + +I H L
Sbjct: 442 ---------------EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG----HHLK 482
Query: 633 QRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCK 692
+ +R + + +DF +++K+
Sbjct: 483 NIEHP----ERMTLFR------MVFLDF-------------------RFLEQKIR----- 508
Query: 693 ESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAE 752
+ +W G + ++ K YK I Y+ + + + E
Sbjct: 509 ----HDSTAWNASGSILNTLQ-QL--KFYKPYICDNDPKYERLVNAILDFLP-----KIE 556
Query: 753 ELYLNAKYMADIV---IPQEYGMTMSEKLTISQ 782
E + +KY D++ + E E Q
Sbjct: 557 ENLICSKYT-DLLRIALMAEDEAIFEEAHKQVQ 588
Score = 42.5 bits (99), Expect = 0.001
Identities = 51/346 (14%), Positives = 107/346 (30%), Gaps = 79/346 (22%)
Query: 49 KQVIVGVCAMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVDCLISFHS 108
KQV + A + + L E + + + + P +
Sbjct: 275 KQVTDFL--SAATTTHISLDHHSMTLTPDE--VKSLLLK-YLDCRPQDLPREVLTTN--- 326
Query: 109 KGFPLEKAIKYANLRK-PFVINN-LNMQYD-----IQ---------DRRKVYALLE--KE 150
P +I ++R +N ++ D I+ + RK++ L
Sbjct: 327 ---PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 151 GIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIVFNKPFVEK---PVSAEDHNIYIYYP 207
IP +L + ++++S+ V VN + VEK + +IY+
Sbjct: 384 SAHIP-TILLSL-----IWFDVIKSDVMVVVNKLH-KYSLVEKQPKESTISIPSIYLELK 436
Query: 208 TSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYT-VGPDYAH-- 264
L R I Y+ +F +D +P D Y+ +G + H
Sbjct: 437 VKLEN-EYALHRSIVDH---YNIPK------TFDSDDLIP-PYLDQYFYSHIG--H-HLK 482
Query: 265 -AEARKSPA-----------LDGKVERDSEGKEIRYPVI-----LSNAEKLISRKVCLAF 307
E + L+ K+ DS ++ L + I +
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN-DPKY 541
Query: 308 KQTVCGF-DLLRANGKSFV----CDVNGFSFVKNSNKYYDDSAKIL 348
++ V D L ++ + D+ + + ++++ K +
Sbjct: 542 ERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 61.2 bits (148), Expect = 2e-09
Identities = 115/687 (16%), Positives = 197/687 (28%), Gaps = 294/687 (42%)
Query: 355 ELAPTLHIP---WSVPFQLDDPPFVPTTFGKMMELRCVVAVIRHGDRTPKQKMKVEVRHP 411
L L +P + + QL + F K++ + T E P
Sbjct: 15 SLEHVLLVPTASFFIASQLQE------QFNKILP-----------EPTEGFAADDEPTTP 57
Query: 412 KFFEIFYKYGGQNDGHV-KLKKPKQLQEVLDIARMLLTEIENNS-ADPEI--------EE 461
E+ K+ G+V L +P ++ + + + LTE EN +I +E
Sbjct: 58 --AELVGKF----LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQE 111
Query: 462 KQGKLEQLKGVLEMYGHFSGINRKVQMKYQPK---GRPRGSSSDEEEEDVCKPKEPSLVL 518
L + K +++ Y + RP K +L
Sbjct: 112 NDTTLVKTKELIKNY-------------ITARIMAKRPFD-----------KKSNSALF- 146
Query: 519 ILKWGGELTPAG--RIQAEELGRVFRCMYPGGQGNGLG----LLRLHSTFRHDLKIYASD 572
G ++ A +F GGQGN L L+ T+ +
Sbjct: 147 ------RAVGEGNAQLVA-----IF-----GGQGNTDDYFEELRDLYQTYHVLVGDLIK- 189
Query: 573 EGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGL-----LDNDSDASKHQNIVKA- 626
+A L+ + + T GL L+N S+ ++
Sbjct: 190 ------FSAETLSELIRTTLDAEKVF--------TQGLNILEWLENPSNTPDKDYLLSIP 235
Query: 627 ---KLHDLLQ--------RDRTFTPED-RDKVN---PCNA---TSINIAM-----DFVKN 663
L ++Q + FTP + R + + T++ IA F +
Sbjct: 236 ISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVS 295
Query: 664 PVQCCKRIHELIHVLQHIIQKKLEDVKCKE-------------SSLYHGE---SWELM-- 705
+ + I VL I V+C E SL + E S M
Sbjct: 296 -------VRKAITVLFFI------GVRCYEAYPNTSLPPSILEDSLENNEGVPSP--MLS 340
Query: 706 --GRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYL---NAKY 760
+++ ++K N H +++ + N
Sbjct: 341 ISNLTQEQVQD---------YVNKT-------------NSH---LPAGKQVEISLVNG-- 373
Query: 761 MAD-IVI---PQE-YGMTMSEKLTISQGICVPLLKKIRADL---QRNVEESEEN---VNR 809
A +V+ PQ YG+ ++ L+K +A Q + SE NR
Sbjct: 374 -AKNLVVSGPPQSLYGLNLT-------------LRKAKAPSGLDQSRIPFSERKLKFSNR 419
Query: 810 LNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGLTESVHM-------NDEQW-- 860
P V+SP F HS L L + + N+ +
Sbjct: 420 FLP-----VASP---------F------HSHL-------LVPASDLINKDLVKNNVSFNA 452
Query: 861 ---------------MRAMEYVSMVSELNYMSQVVIMLYEDP------TKDPTSDERFHI 899
+R +SE ++V + P T+ + HI
Sbjct: 453 KDIQIPVYDTFDGSDLR--VLSGSISE-----RIVDCIIRLPVKWETTTQFKAT----HI 501
Query: 900 ELHFSPG----VNCCVQKNLPPGPGFR 922
L F PG + +N G G R
Sbjct: 502 -LDFGPGGASGLGVLTHRNK-DGTGVR 526
Score = 60.1 bits (145), Expect = 5e-09
Identities = 90/684 (13%), Positives = 185/684 (27%), Gaps = 241/684 (35%)
Query: 556 LRL-HSTFRHDLKIYASDEGRVQMTAAAFAKGLLALEGELTPILVQMVKSANTNGLLDND 614
L L H + H L + + F K L T G +D
Sbjct: 9 LTLSHGSLEHVLLVPTASFFIASQLQEQFNKIL----------------PEPTEGFAADD 52
Query: 615 SDASKHQNIVKAKLHDLLQR-----DRTFTPEDRDKVNPCNATSIN-IAMDFVKNPVQCC 668
+ +L+ + P + + + +++
Sbjct: 53 EPTTPA---------ELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEG----- 98
Query: 669 KRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWELMGRRWSKIEKDFCMKNYKYDISKI 728
IH L L L K + + R + K + +++
Sbjct: 99 NDIHALAAKLLQENDTTLVKTKELIKNYITARI--MAKRPFDKKSNSALFRAVGEGNAQL 156
Query: 729 PDIYDCIKYDL---QHNQHTVQFDQAEELYLNAKYMADIVIPQEYGMTMSEKLTISQGIC 785
+ Q N F++ +LY +
Sbjct: 157 --------VAIFGGQGNTDDY-FEELRDLY-----------------------QTYHVLV 184
Query: 786 VPLLKKIRADLQRNVEESEENVNRLNPQYSHGV----------SSPGRHVRTRLYFTSE- 834
L+K L + + + ++ G+ ++P + Y S
Sbjct: 185 GDLIKFSAETLSELIRTTLDA----EKVFTQGLNILEWLENPSNTPDKD-----YLLSIP 235
Query: 835 -SH-IHSLLTVLRYGGLTESVHMNDEQWMRAMEYVSMVSELNYMSQVVIMLYEDPTKDPT 892
S + ++ + Y + + + ++ + S+ + +
Sbjct: 236 ISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAE--------TD 287
Query: 893 SDERFH------IELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNL-PRIDQEDTEFYS 945
S E F I + F GV C + P +L P I +
Sbjct: 288 SWESFFVSVRKAITVLFFIGVRC--YEAYPN-------------TSLPPSILE------- 325
Query: 946 TDAEDNTGSSKSTSDQDSPT---SAEGPS-------VDQSKGKFVLSQPIPITVKDLKRK 995
D+ +N ++ P+ S + V+++ + + I++
Sbjct: 326 -DSLEN--------NEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV----- 371
Query: 996 NSVGDPCPS--IVAPEGHP---------YRRPRSPNEEQRSRS-YDQQHQRPKGASKCCE 1043
N +V+ G P R+ ++P+ +SR + ++ + K
Sbjct: 372 NG-----AKNLVVS--GPPQSLYGLNLTLRKAKAPSGLDQSRIPFSER--KLKF------ 416
Query: 1044 GNCRHR--------HSISGQMCYLKNSTGYGF----RRGLALSSSSGNSL----FSTAVI 1087
+R HS L ++ + ++ ++ + + T
Sbjct: 417 ---SNRFLPVASPFHSH-----LLVPASDLINKDLVKNNVSFNAKD---IQIPVYDTF-- 463
Query: 1088 SGS-------SSAPNLRNMI-------PSTTNVTA---LD-GFGGVPSIRPLETLHNALS 1129
GS S + + + I +TT A LD G GG + L T N
Sbjct: 464 DGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVL-THRN--- 519
Query: 1130 LKHLDNFLGKMIRVIPSKTPASSP 1153
D G +RVI + T +P
Sbjct: 520 ---KD---GTGVRVIVAGTLDINP 537
Score = 55.1 bits (132), Expect = 2e-07
Identities = 83/500 (16%), Positives = 143/500 (28%), Gaps = 167/500 (33%)
Query: 815 SHGVSSPGRHVRTRLYFTS----ESHIHSLLTVLRYGGLTESVHMNDEQ------WMRAM 864
SHG V T +F + E L TE +DE + +
Sbjct: 12 SHGSLEHVLLVPTASFFIASQLQEQFNKILPEP------TEGFAADDEPTTPAELVGKFL 65
Query: 865 EYVSMV---SELNYMSQVVIMLYEDPTKDPTSDERFH------IELHFSPGVNCCVQKNL 915
YVS + S++ QV+ + + F ++H + L
Sbjct: 66 GYVSSLVEPSKVGQFDQVLNLCLTE----------FENCYLEGNDIH-------ALAAKL 108
Query: 916 PPGPGFRPHSRNDQKKNLPRIDQEDTEFYSTDAEDNTGSSKSTSDQDSPTSAEGPSVDQS 975
+ + K L + + + K SA +V +
Sbjct: 109 LQ----ENDTTLVKTKELIKN------YITARIMAKRPFDKK------SNSALFRAVGEG 152
Query: 976 KGKFVLS---Q-PIPITVKDLKRKNSVGDPCPSIVAP-----EGHPYRRPRSPNEEQR-- 1024
+ V Q ++L+ + +V R+ + ++
Sbjct: 153 NAQLVAIFGGQGNTDDYFEELR---DLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVF 209
Query: 1025 SRSYD------QQHQRPKG---ASKCCEGNCRHRHSISG------QMC-YLKNSTGYGFR 1068
++ + P S IS Q+ Y+ + GF
Sbjct: 210 TQGLNILEWLENPSNTPDKDYLLSI----------PISCPLIGVIQLAHYVVTAKLLGFT 259
Query: 1069 RGLALSSSSGNS-----LFSTAVISGSSSAP----NLRNMI------------------- 1100
G S G + L + I+ + S ++R I
Sbjct: 260 PGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSL 319
Query: 1101 PSTTNVTALDGFGGVPSIRPLETLHNALSLKHLD-NFLGKMIRVIPSKTPASSPPKYPST 1159
P + +L+ GVPS P+ LS+ +L + + KT + P
Sbjct: 320 PPSILEDSLENNEGVPS--PM------LSISNLTQEQVQDYVN----KTNSHLP---AGK 364
Query: 1160 PIEHSLSGARLGWSGPPSFVSESGPSSPNALSDYFFKSGLNTS---DSCSSEFSSSRSSV 1216
+E SL +G + V SGP P +L Y GLN + S SR +
Sbjct: 365 QVEISLV------NGAKNLVV-SGP--PQSL--Y----GLNLTLRKAKAPSGLDQSR--I 407
Query: 1217 PSSEVDIRDPGGDVT--PMS 1234
P SE R P++
Sbjct: 408 PFSE---RKLKFSNRFLPVA 424
Score = 48.5 bits (115), Expect = 2e-05
Identities = 86/584 (14%), Positives = 164/584 (28%), Gaps = 200/584 (34%)
Query: 238 GSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKS------PALDGKVERDSEGKEIRYPVI 291
GS + +PT + A + P D E P
Sbjct: 14 GSLEHVLLVPTA-----------SFFIASQLQEQFNKILPEPTEGFAADDE------PT- 55
Query: 292 LSNAEKLISRKVCLAF------KQTVCGFD-LLRANGKSFVCDVNGFSFVKNSNKYYDDS 344
+ AE L+ + L + V FD +L F +++ ++
Sbjct: 56 -TPAE-LVGK--FLGYVSSLVEPSKVGQFDQVLNLCLTEFENC-----YLEGND------ 100
Query: 345 AKILGNMILRELAPTLHIPWSVPFQLDDPPFVPTTFGKMME-LRCVVAVIRHGDRTPKQK 403
+H ++ +L TT K E ++ + R +K
Sbjct: 101 ---------------IH---ALAAKL--LQENDTTLVKTKELIKNYITARIMAKRPFDKK 140
Query: 404 MKVEVRHPKFFE--------IFYKYGGQNDGHVKLKKPKQLQEVLDIARMLLTEIENNSA 455
+ F + +GGQ + ++L+++ +L+ ++
Sbjct: 141 -----SNSALFRAVGEGNAQLVAIFGGQGNTDDYF---EELRDLYQTYHVLVGDL----- 187
Query: 456 DPEIEEKQGKLEQL-KGVLEMYGHFS-GINRKVQMKYQPKGRPRGSSSDEEEEDVCKPKE 513
I+ L +L + L+ F+ G+N ++ P P +++ +
Sbjct: 188 ---IKFSAETLSELIRTTLDAEKVFTQGLNILEWLE-NPSNTP-------DKDYLLSI-- 234
Query: 514 P-SLVLI-----------LKWGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLL----- 556
P S LI K G TP EL + G G+ GL+
Sbjct: 235 PISCPLIGVIQLAHYVVTAKLLG-FTPG------ELRSYLK----GATGHSQGLVTAVAI 283
Query: 557 -------RLHSTFRHDLKI-----YASDE--GRVQMTAAAFAKGLLALEGELTPILVQMV 602
+ R + + E + + L EG +P+L +
Sbjct: 284 AETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLS--I 341
Query: 603 KSAN----------TNGLLDNDSDAS-----KHQNIVKA----KLHDL---LQRDRTFTP 640
+ TN L +N+V + L+ L L++ + +
Sbjct: 342 SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSG 401
Query: 641 EDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKE-----SS 695
D+ ++ P + + + F+ PV H H+L +D+
Sbjct: 402 LDQSRI-PFSERKLKFSNRFL--PVAS--PFHS--HLLVPASDLINKDLVKNNVSFNAKD 454
Query: 696 L----YHGESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCI 735
+ Y D S I DCI
Sbjct: 455 IQIPVYDTFDG-----------SDLR----VLSGSISERIVDCI 483
Score = 38.9 bits (90), Expect = 0.013
Identities = 33/222 (14%), Positives = 71/222 (31%), Gaps = 68/222 (30%)
Query: 705 MGR---------R--WSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHN--QHTVQFDQA 751
MG + W++ + F Y + I I + +N T+ F
Sbjct: 1631 MGMDLYKTSKAAQDVWNRADNHF-KDTYGFSILDI----------VINNPVNLTIHFGGE 1679
Query: 752 EELYLNAKYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLN 811
+ + Y A M E + + + K+I SE+ + L+
Sbjct: 1680 KGKRIRENYSA---------MIF-ETIVDGKLKTEKIFKEINEHSTSYTFRSEKGL--LS 1727
Query: 812 -PQYSH----GVS-SPGRHVRTRLYFTSESHI--HSL------------------LTVLR 845
Q++ + + ++++ +++ HSL + V+
Sbjct: 1728 ATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVF 1787
Query: 846 YGGLTESVHM-NDEQWMRAMEYVSMVSELNYMSQVVIMLYED 886
Y G+T V + DE M++ +N +V ++
Sbjct: 1788 YRGMTMQVAVPRDEL---GRSNYGMIA-IN-PGRVAASFSQE 1824
Score = 38.1 bits (88), Expect = 0.025
Identities = 54/331 (16%), Positives = 92/331 (27%), Gaps = 128/331 (38%)
Query: 48 GKQVIVGVC-AMAKKSQS--KPMKEILTRLEEFEFI--------KMIVFSEETIQKPVDE 96
+ ++ V A +S +++ +T L F FI ++ ++
Sbjct: 274 SQGLVTAVAIAETDSWESFFVSVRKAITVL--F-FIGVRCYEAYPNTSLPPSILEDSLE- 329
Query: 97 WPIVDCLISFHSKGFP-------------LEKAIKYANLRKP---------------FVI 128
+++G P ++ + N P V+
Sbjct: 330 ----------NNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVV 379
Query: 129 -------NNLNMQYDIQDRRKVYALLEKEGIEIP---RYAVLDRE---------SP--DP 167
LN+ RK A + IP R S P
Sbjct: 380 SGPPQSLYGLNLTL-----RKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVP 434
Query: 168 VKHELVESEDHVEVNGIVFNKPFVEKPVSAEDHNIYIYYPTSAG------GGS--QRLFR 219
+ + + N + FN ++ PV Y T G GS +R+
Sbjct: 435 ASDLINK---DLVKNNVSFNAKDIQIPV----------YDTFDGSDLRVLSGSISERIVD 481
Query: 220 KIGSRSSVYSPESRVRKSGSFIYEDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVER 279
I R V + + + I DF GP + L R
Sbjct: 482 CI-IRLPVKWETT-TQFKATHIL-DF-------------GPG-------GASGLGVLTHR 518
Query: 280 DSEGKEIRYPVILSNAEKL-ISRKVCLAFKQ 309
+ +G +R VI+ A L I+ FKQ
Sbjct: 519 NKDGTGVR--VIV--AGTLDINPDDDYGFKQ 545
Score = 37.0 bits (85), Expect = 0.052
Identities = 28/111 (25%), Positives = 38/111 (34%), Gaps = 36/111 (32%)
Query: 1117 SIRPLETLHNALSLKH--------------L-DNFLGKMIRVIPSKTPASSPPKYPSTPI 1161
S RPL TL + SL+H L + F +++P T + P+TP
Sbjct: 5 STRPL-TLSHG-SLEHVLLVPTASFFIASQLQEQFN----KILPEPTEGFAADDEPTTPA 58
Query: 1162 EHSLSGARLGWSGPPSFVSESGPSSPNALSDYFFKSGLNTSDSCSSEFSSS 1212
E L G LG +VS S D L EF +
Sbjct: 59 E--LVGKFLG------YVSSLVEPSKVGQFDQVLNLCLT-------EFENC 94
Score = 33.5 bits (76), Expect = 0.64
Identities = 36/254 (14%), Positives = 66/254 (25%), Gaps = 128/254 (50%)
Query: 768 QEYGMTMSEKLTISQGICVPLLKKI--RADLQRNVEESEENVNRLNPQYSHGVSSPGRHV 825
QE GM M + S + + RAD H
Sbjct: 1627 QEQGMGM-DLYKTS-----KAAQDVWNRAD---------------------------NHF 1653
Query: 826 RTRLYFTSESHIHSLLTVLRYGGLTESVHMNDE--QWMRAMEYVSMVSELNYMSQVVIML 883
+ F S+L ++ + ++H E + +R NY + M+
Sbjct: 1654 KDTYGF-------SILDIVINNPVNLTIHFGGEKGKRIRE----------NYSA----MI 1692
Query: 884 YEDPTKDPTSDERFHIELHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNLPRIDQEDTEF 943
+E D + E K I++ T +
Sbjct: 1693 FETI-----VDGKLKTE------------------------------KIFKEINEHSTSY 1717
Query: 944 -YSTDAED-----NTGSSKSTSDQDSPTSAEGPSVDQSKGKFVLSQPIPITVKDLKRKNS 997
+ ++ T Q P++ ++ + +DLK K
Sbjct: 1718 TFRSEKGLLSATQFT--------Q--------PAL------TLMEKAA---FEDLKSKGL 1752
Query: 998 VGDPCPSIVAPEGH 1011
+ P + A GH
Sbjct: 1753 I--PADATFA--GH 1762
Score = 33.1 bits (75), Expect = 0.82
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 35/136 (25%)
Query: 748 FDQAEEL-YLNAKYMADIVIPQE-----YGMTMSEKLTISQGICVPLLKKIRADLQRNVE 801
+ E+ + M V E YGM ++ L+ + + +
Sbjct: 1779 IESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTG 1838
Query: 802 ESEENVNRLN-P--QYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGG--------LT 850
E VN N QY V++ G +R + ++ VL + L
Sbjct: 1839 WLVEIVN-YNVENQQY---VAA-G-DLRA---------LDTVTNVLNFIKLQKIDIIELQ 1883
Query: 851 ESVHMNDEQWMRAMEY 866
+S+ + + + +
Sbjct: 1884 KSLSLEE---VEGHLF 1896
>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii}
Length = 458
Score = 57.6 bits (138), Expect = 1e-08
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582
+ AG A + G FR Y L + T ++ S+ GRV T+
Sbjct: 126 NSDSIYAGTTDAMKHGIAFRTKYG-------ELFDTNDTLP----VFTSNSGRVYQTSQY 174
Query: 583 FAKGLLALEGELTPILVQMV---KSANTNGLLDND 614
FA+G + + + ++ N L D
Sbjct: 175 FARGFMGDDFSNDTVKTNIISEDADMGANSLTPRD 209
>1uc8_A LYSX, lysine biosynthesis enzyme; alpha-aminoadipate pathway, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; 2.00A {Thermus thermophilus} SCOP:
c.30.1.6 d.142.1.7 PDB: 1uc9_A*
Length = 280
Score = 54.4 bits (131), Expect = 7e-08
Identities = 41/213 (19%), Positives = 64/213 (30%), Gaps = 41/213 (19%)
Query: 126 FVINNLNMQYDIQDRRKVYALLEKEGIEIPRYAVLDRESPDPVKHELVESEDHVEVNGIV 185
V+N + D+ L K G+ P+ A+ + L+E+
Sbjct: 75 PVVNRPEVIEACGDKWATSVALAKAGLPQPKTALA--TDREEAL-RLMEA---------- 121
Query: 186 FNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPES-RVRKSGSFIYED 244
F P V KPV S G E + F ++
Sbjct: 122 FGYPVVLKPVI-----------GSWGRLLAXXXXXXXXXXXXXXKEVLGGFQHQLFYIQE 170
Query: 245 FMPTDGTDVKVYTVGPDYAHAEARKS------PALDGKVERDSEGKEIRYPVILSNAEKL 298
++ G D++V+ VG A R+S A G+ E L+
Sbjct: 171 YVEKPGRDIRVFVVGERAIAAIYRRSAHWITNTARGGQAE----------NCPLTEEVAR 220
Query: 299 ISRKVCLAFKQTVCGFDLLRANGKSFVCDVNGF 331
+S K A V DL + V +VN
Sbjct: 221 LSVKAAEAVGGGVVAVDLFESERGLLVNEVNHT 253
>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase;
HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP:
c.60.1.2
Length = 460
Score = 46.4 bits (109), Expect = 5e-05
Identities = 21/125 (16%), Positives = 33/125 (26%), Gaps = 18/125 (14%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
AG + A G ++ Y L + ++S GRV TA F
Sbjct: 116 TSGPYAGLLDAYNHGNDYKARYGH-------LWNGETVVP----FFSSGYGRVIETARKF 164
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLL-------DNDSDASKHQNIVKAKLHDLLQRDR 636
+G L + +S DND + + R
Sbjct: 165 GEGFFGYNYSTNAALNIISESEVMGADSLTPTCDTDNDQTTCDNLTYQLPQFKVAAARLN 224
Query: 637 TFTPE 641
+ P
Sbjct: 225 SQNPG 229
>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase,
phytate binding site, hydrolase; HET: IHP; 1.88A
{Enterobacter cloacae} PDB: 1nt4_A*
Length = 398
Score = 45.3 bits (106), Expect = 9e-05
Identities = 48/326 (14%), Positives = 88/326 (26%), Gaps = 77/326 (23%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHD-LKIYASDEGRVQMTAAA 582
G+LT G + +G R G+++ D + YA+ R TA
Sbjct: 45 GQLTTKGGVLEVYMGHYMREWL-----AQQGMVKTGECPAADSVYAYANSLQRTVATAQF 99
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPED 642
F G ++ + D TF P
Sbjct: 100 FITGAF------------------------------PGCDVPVHHQEKMGTMDPTFNPVI 129
Query: 643 RDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGES- 701
D P AM+ + +Q + L + +S +
Sbjct: 130 TDNS-PEFREKALKAMETERQKMQLTESYKLLEQMTN-----------YADSPSCKEKKV 177
Query: 702 WELMGRRWS---KIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNA 758
L + + EK+ + + + D + Y Q E +
Sbjct: 178 CSLADAKDTFSADYEKEPGVSGPLKVGNSLVDAFTLQYY---EGFPADQVAWGEIKT-DQ 233
Query: 759 KYMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGV 818
++ + Y ++ ++Q + PL+K I L
Sbjct: 234 QWRVLSKLKNGYQDSLFTSTEVAQNVAKPLVKYIDKTLV--------------------- 272
Query: 819 SSPGRHVRTRLYFTSESHIHSLLTVL 844
+ + + L +S+I SLLT L
Sbjct: 273 TEQAKAPKITLLVGHDSNIASLLTAL 298
Score = 34.1 bits (77), Expect = 0.30
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 384 MELRCVVAVIRHGDRTP 400
+L V+ + R R P
Sbjct: 5 YQLEQVLIMSRANLRAP 21
>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella
pneumoniae} PDB: 2wni_A 2wu0_A
Length = 418
Score = 44.9 bits (105), Expect = 1e-04
Identities = 48/344 (13%), Positives = 91/344 (26%), Gaps = 70/344 (20%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
GELT G GR Y LGLL+ + + AS R + TA A
Sbjct: 54 GELTGHGYAAVVNKGREEGQHY-----RQLGLLQAGCPTAESIYVRASPLQRTRATAQAL 108
Query: 584 AKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTPEDR 643
G + H + D F +
Sbjct: 109 VDGAFP------------------------GCGVAIH--------YANGDADPLFQTDKF 136
Query: 644 DKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHGESWE 703
A + + + Q + + I +L+ + + + C
Sbjct: 137 AATQTDPARQLAAVKEKAGDLAQRRQALAPTIQLLKQAVCQADK--PCPIFDTPWRVEQS 194
Query: 704 LMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAKYMAD 763
G+ +S + ++ + ++ N Q + ++ A
Sbjct: 195 KSGKTTIS------------GLSVMANMVETLRLGWSENLPLSQLAWGKIAQA-SQITAL 241
Query: 764 IVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEE------------------ 805
+ + E ++ L +Q LL + ++ +
Sbjct: 242 LPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEASPNVRWLLLVAHDTNIAMVRTLM 301
Query: 806 NVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRYGGL 849
N + P YS G PG + + ++S L + GL
Sbjct: 302 NFSWQLPGYSRGNIPPGSSLVLERWRDAKSGERYLRVYFQAQGL 345
Score = 34.1 bits (77), Expect = 0.29
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 384 MELRCVVAVIRHGDRTP 400
+L VV + RHG R P
Sbjct: 14 WQLEKVVELSRHGIRPP 30
>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle,
glycoprotein phosphohistidine, hydrolase; HET: NEP NAG;
1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB:
1skb_A* 1sk8_A* 1ska_A* 1sk9_A*
Length = 442
Score = 44.5 bits (104), Expect = 2e-04
Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 19/148 (12%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
+LTP G Q G F Y I AS RV +
Sbjct: 100 GADDLTPFGEQQLVNSGIKFYQRYK------------ALARSVVPFIRASGSDRVIASGE 147
Query: 582 AFAKGLLALEGELTPILVQMVKSANT----NGLLDNDSDASKHQNIVKAKLHDLLQRD-- 635
F +G + + + + + +N D ++L D + +
Sbjct: 148 KFIEGFQQAKLADPGATNRAAPAISVIIPESETFNNTLDHGVCTKFEASQLGDEVAANFT 207
Query: 636 RTFTPEDRDKVNPCNATSINIAMDFVKN 663
F P+ R + + + + + V +
Sbjct: 208 ALFAPDIRARAEK-HLPGVTLTDEDVVS 234
>3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate
phosphohydrolase, 37288-11-2, MYO-inositol hexakis
sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger}
PDB: 3k4p_A* 1ihp_A
Length = 444
Score = 44.5 bits (104), Expect = 2e-04
Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 12/72 (16%)
Query: 522 WGGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAA 581
+LTP G + G F Y T I +S RV +
Sbjct: 101 GADDLTPFGEQELVNSGIKFYQRYE------------SLTRNIVPFIRSSGSSRVIASGK 148
Query: 582 AFAKGLLALEGE 593
F +G + + +
Sbjct: 149 KFIEGFQSTKLK 160
>1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP;
2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A*
1dkm_A 1dkn_A 1dko_A 1dkl_A
Length = 410
Score = 44.2 bits (103), Expect = 2e-04
Identities = 43/325 (13%), Positives = 85/325 (26%), Gaps = 59/325 (18%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHD-LKIYASDEGRVQMTAAA 582
G LTP G LG R GLL + + I A + R + T A
Sbjct: 45 GWLTPRGGELIAYLGHYQRQRL-----VADGLLAKKGCPQSGQVAIIADVDERTRKTGEA 99
Query: 583 FAKGLLALEGELTPILVQMVKSANTNGLLDNDSDASKHQNIVKAKLHDLLQRDRTFTP-- 640
FA GL + Q S D F P
Sbjct: 100 FAAGL--APDCAITVHTQTDTS----------------------------SPDPLFNPLK 129
Query: 641 EDRDKVNPCNAT-SINIAMDFVKNPVQCCKRIHELIHVLQHIIQKKLEDVKCKESSLYHG 699
+++ N T +I + L+ ++ ++ K
Sbjct: 130 TGVCQLDNANVTDAILSRAGG--SIADFTGHRQTAFRELERVLNFPQSNLCLKR--EKQD 185
Query: 700 ESWELMGRRWSKIEKDFCMKNYKYDISKIPDIYDCIKYDLQHNQHTVQFDQAEELYLNAK 759
ES L S+++ + +S + + + + + +
Sbjct: 186 ESCSLTQALPSELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRI---TDSHQ 242
Query: 760 YMADIVIPQEYGMTMSEKLTISQGICVPLLKKIRADLQRNVEESEENVNRLNPQYSHGVS 819
+ + + + +++ PLL I+ L + + + L
Sbjct: 243 WNTLLSLHNAQFYLLQRTPEVARSRATPLLDLIKTALTPHPPQKQAYGVTLPTSVL---- 298
Query: 820 SPGRHVRTRLYFTSESHIHSLLTVL 844
++++ +L L
Sbjct: 299 ---------FIAGHDTNLANLGGAL 314
Score = 33.8 bits (76), Expect = 0.33
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 384 MELRCVVAVIRHGDRTP 400
++L VV V R G R P
Sbjct: 6 LKLESVVIVSRAGVRAP 22
>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi
hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP:
c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A*
2l3h_A 2l77_A 2l79_A
Length = 354
Score = 42.8 bits (100), Expect = 5e-04
Identities = 25/111 (22%), Positives = 34/111 (30%), Gaps = 16/111 (14%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
G+LT G Q ELG R Y S + I ++D R M+A
Sbjct: 36 GQLTQLGMEQHYELGEYIRKRYRK--------FLNESYKHEQVYIRSTDVDRTLMSAMTN 87
Query: 584 AKGLLALEGELT--------PILVQMVKSANTNGLLDNDSDASKHQNIVKA 626
L EG PI V V + L + + Q +
Sbjct: 88 LAALFPPEGVSIWNPILLWQPIPVHTVPLSEDQLLYLPFRNCPRFQELESE 138
Score = 32.8 bits (74), Expect = 0.66
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 385 ELRCVVAVIRHGDRTP 400
EL+ V V RHGDR+P
Sbjct: 2 ELKFVTLVFRHGDRSP 17
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate
mutase family member 5, BXLBV68, MGC protein, structural
genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo
sapiens} PDB: 3o0t_A
Length = 202
Score = 39.8 bits (93), Expect = 0.003
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 17/74 (22%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
LTP GR QAE G RL S KI S R T +
Sbjct: 32 TLTPLGREQAELTGL-----------------RLASLGLKFNKIVHSSMTRAIETTDIIS 74
Query: 585 KGLLALEGELTPIL 598
+ L + T +L
Sbjct: 75 RHLPGVCKVSTDLL 88
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural
genomics, isomerase, structural GE consortium, SGC;
2.40A {Plasmodium falciparum}
Length = 214
Score = 39.3 bits (92), Expect = 0.004
Identities = 17/78 (21%), Positives = 23/78 (29%), Gaps = 19/78 (24%)
Query: 523 GGELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDL--KIYASDEGRVQMTA 580
LT G QA+ G+ +L + IY SD R + TA
Sbjct: 42 SKRLTKEGCKQADITGK-----------------KLKDILNNKKVSVIYHSDMIRAKETA 84
Query: 581 AAFAKGLLALEGELTPIL 598
+K P L
Sbjct: 85 NIISKYFPDANLINDPNL 102
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella
tularensis subsp} PDB: 2glc_A 2glb_A 2gla_A 3it0_A*
3it1_A* 3it2_A 2p36_A*
Length = 342
Score = 39.3 bits (91), Expect = 0.006
Identities = 17/64 (26%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Query: 524 GELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
ELTP G Q LG R Y G L + + +S R ++A +
Sbjct: 38 SELTPIGMNQEYNLGLQLRKRYIDKFG-----LLPEHYVDQSIYVLSSHTNRTVVSAQSL 92
Query: 584 AKGL 587
GL
Sbjct: 93 LMGL 96
Score = 32.7 bits (74), Expect = 0.70
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 384 MELRCVVAVIRHGDRTP 400
+L V + RHGDR P
Sbjct: 6 SKLIFVSMITRHGDRAP 22
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU
proteolysis, structural genomics, PSI protein structure
initiative; 1.80A {Agrobacterium tumefaciens str}
Length = 219
Score = 36.0 bits (83), Expect = 0.042
Identities = 11/63 (17%), Positives = 18/63 (28%), Gaps = 19/63 (30%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
L+ G +A E R+ +I +S E + TA A
Sbjct: 44 GLSERGAERAREASRLPWAKALR-------------------RIVSSAETKAIETAHMLA 84
Query: 585 KGL 587
+
Sbjct: 85 ETS 87
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM,
hydrolase; 1.76A {Bombyx mori}
Length = 263
Score = 36.2 bits (83), Expect = 0.047
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 17/63 (26%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
LT G QA+ +G G+ + +H +YAS R TA F
Sbjct: 59 PLTRLGWFQAQLVGE--------------GMRMAGVSIKH---VYASPALRCVETAQGFL 101
Query: 585 KGL 587
GL
Sbjct: 102 DGL 104
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate
mutase, structural genomics, PSI, structure initiative;
2.20A {Mycobacterium tuberculosis}
Length = 208
Score = 34.9 bits (81), Expect = 0.098
Identities = 17/70 (24%), Positives = 21/70 (30%), Gaps = 17/70 (24%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
ELT GR QAE G+ L D + S R TA
Sbjct: 36 ELTDTGRTQAELAGQ-----------------LLGELELDDPIVICSPRRRTLDTAKLAG 78
Query: 585 KGLLALEGEL 594
+ + G L
Sbjct: 79 LTVNEVTGLL 88
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 33.8 bits (76), Expect = 0.16
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 10/30 (33%)
Query: 555 LLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
L +L ++ LK+YA D +A A A
Sbjct: 22 LKKLQAS----LKLYADD------SAPALA 41
Score = 33.8 bits (76), Expect = 0.17
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 461 EKQGKLEQLKGVLEMYGHFS----GINRKVQ 487
EKQ L++L+ L++Y S I ++
Sbjct: 18 EKQ-ALKKLQASLKLYADDSAPALAIKATME 47
Score = 31.1 bits (69), Expect = 1.1
Identities = 5/18 (27%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
Query: 215 QRLFRKIGSRSSVYSPES 232
Q L +K+ + +Y+ +S
Sbjct: 20 QAL-KKLQASLKLYADDS 36
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM
homolog; 1.69A {Bacillus stearothermophilus} SCOP:
c.60.1.1 PDB: 1h2f_A* 1ebb_A
Length = 207
Score = 34.1 bits (79), Expect = 0.20
Identities = 15/63 (23%), Positives = 16/63 (25%), Gaps = 19/63 (30%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
LT GR A LG+ IY S GR TA
Sbjct: 27 PLTEKGRQDAMRLGKRLE----------------AVELAA---IYTSTSGRALETAEIVR 67
Query: 585 KGL 587
G
Sbjct: 68 GGR 70
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics
initiative, RSGI, structural genomics,; 1.40A {Thermus
thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A
2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A
2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A
2enw_A ...
Length = 177
Score = 33.7 bits (78), Expect = 0.21
Identities = 12/58 (20%), Positives = 15/58 (25%), Gaps = 22/58 (37%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAA 582
LT G QA L L ++SD R + TA
Sbjct: 26 PLTAEGEAQARRLKGALP----------------------SLPAFSSDLLRARRTAEL 61
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase;
1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Length = 273
Score = 34.0 bits (77), Expect = 0.26
Identities = 13/63 (20%), Positives = 17/63 (26%), Gaps = 17/63 (26%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
L+ G QA G LL ++AS R TA
Sbjct: 66 PLSSCGIFQARLAGE--------------ALLDSGVRVTA---VFASPALRCVQTAKHIL 108
Query: 585 KGL 587
+ L
Sbjct: 109 EEL 111
>1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane
protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP:
c.30.1.5 d.142.1.3 PDB: 1px2_A*
Length = 422
Score = 33.3 bits (75), Expect = 0.50
Identities = 40/227 (17%), Positives = 76/227 (33%), Gaps = 36/227 (15%)
Query: 126 FVINNLNMQYDIQDRRKVYALLEKE--GIEIPRYAVLDRESPDPVKHELVESEDHVEVNG 183
+N+L+ Y+ D+ V+A + + + + ++D+ K
Sbjct: 212 PSVNSLHSVYNFCDKPWVFAQMVRLHKKLGTEEFPLIDQTFYPNHKE-----------ML 260
Query: 184 IVFNKPFVEKPVSAEDHNIYIYYPTSAGGGSQRLFRKIGSRSSVYSPESRVRKSGSFIY- 242
P V K S K+ ++ S V + ++
Sbjct: 261 SSTTYPVVVKMGH---------------AHSGMGKVKVDNQHDFQDIASVVALTKTYATA 305
Query: 243 EDFMPTDGTDVKVYTVGPDYAHAEARKSPALDGKVERDSEGKEIRYPVILSNAEKLISRK 302
E F+ DV+V +G +Y A R S + + K S E + +S+ KL
Sbjct: 306 EPFIDA-KYDVRVQKIGQNYK-AYMRTSVSGNWKTNTGSAMLE---QIAMSDRYKLWVDT 360
Query: 303 VCLAFKQ-TVCGFDLLRA-NGKSFVCDVNGFSFVKNSNKYYDDSAKI 347
F +C + L +G+ + +V G S + +D I
Sbjct: 361 CSEIFGGLDICAVEALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLI 407
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase,
flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Length = 566
Score = 32.1 bits (74), Expect = 1.5
Identities = 7/43 (16%), Positives = 8/43 (18%), Gaps = 7/43 (16%)
Query: 891 PTSDERFHIELHFSPGVNCCVQKNLPPGPGF-------RPHSR 926
H E FS G P +R
Sbjct: 380 AAGPNSAHWETIFSNQWFHPAIPRPDTGSFMSVTNALISPVAR 422
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin
synthesis, ASB locus, structu genomics, PSI-2, protein
structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus
anthracis}
Length = 286
Score = 30.9 bits (70), Expect = 2.3
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 11/89 (12%)
Query: 102 CLISFHSKGFPLEKAIKYAN--------LRKPFVINNLNMQYDIQDRRKVYALLEKEGIE 153
C ISF + +++A L N + + + L+ + +E
Sbjct: 6 CTISFRHQLISFTDIVQFAYENGFEGIELWGTHAQNLY--MQEYETTERELNCLKDKTLE 63
Query: 154 IPRYAV-LDRESPDPVKHELVESEDHVEV 181
I + LD + + + E +
Sbjct: 64 ITMISDYLDISLSADFEKTIEKCEQLAIL 92
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI,
intermolecular contacts, R specificity, tetramer,
disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB:
3lga_A* 3lhd_C*
Length = 255
Score = 30.4 bits (68), Expect = 3.0
Identities = 30/220 (13%), Positives = 70/220 (31%), Gaps = 28/220 (12%)
Query: 518 LILKWGGEL-TPAGRIQAEEL-GRVFRCMYPGGQGNGLGLLR------LHSTFRHDLKIY 569
LI + T G ++ EE+ GR F +G+ +LR L R ++
Sbjct: 19 LITVSKRDFHTDLGILKLEEIIGRNFGEAIKSHKGHEFKILRPRIVDYLDKMKRGPQIVH 78
Query: 570 ASDEGRVQMTAAAFAKGLLALE-----GELTPILVQMVKSANTNGLLDNDSDASKHQNIV 624
D + + A + G +E G LT L +V + D +
Sbjct: 79 PKDAALI-VAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIRED---FAKLA 134
Query: 625 KAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHELIHVLQHI--- 681
+ D T + +D +++ + + P + + + +
Sbjct: 135 WENIKWA-GFDDRVTIKLKDIYEGIEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAY 193
Query: 682 ------IQKKLEDVKCKESSLYHGESWELMGRRWSKIEKD 715
+ + E ++ + + ++ +++K+
Sbjct: 194 TPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQ-EVKKE 232
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange
factor (GEF), small G-protein, signaling protein; 2.40A
{Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A
1kzg_A 1rj2_A
Length = 353
Score = 30.7 bits (69), Expect = 3.4
Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 434 KQLQEVLDIARMLLTEIENNSADPEIEEKQGKLEQLKGVLEMYGHFSGINRKVQMKYQPK 493
+ LQE L +L + ++ I G L L G L M G FS + + K
Sbjct: 172 EDLQEALSSILGILKAVNDSMHLIAITGYDGNLGDL-GKLLMQGSFSVWTDHKKGHTKVK 230
Query: 494 GRPRGSSSD 502
R
Sbjct: 231 ELARFKPMQ 239
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form,
glycosyltransferase; HET: PLP; 2.80A {Saccharomyces
cerevisiae} SCOP: c.87.1.4
Length = 879
Score = 30.6 bits (70), Expect = 4.0
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 19/68 (27%)
Query: 619 KHQNIVKAKLHDLLQRDRTFTPEDRDKVNPCNATSINIAMDFVKNPVQCCKRIHE----L 674
K N K +L DL++++ + ++ D +Q KRIHE
Sbjct: 571 KLNN--KIRLVDLIKKENDGVDIINREYLD---DTL---FD-----MQV-KRIHEYKRQQ 616
Query: 675 IHVLQHII 682
++V II
Sbjct: 617 LNVF-GII 623
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase
(phospho), phosphatase, hydrolase (phosp glycolysis,
bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus}
SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A*
1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Length = 469
Score = 30.0 bits (67), Expect = 5.4
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 17/60 (28%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
L+P GR ++ L + DLK++ S R TA A +
Sbjct: 273 GLSPRGREFSKHLAQFISDQNI-----------------KDLKVFTSQMKRTIQTAEALS 315
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio}
PDB: 3e9d_A 3e9e_A
Length = 265
Score = 29.8 bits (67), Expect = 5.6
Identities = 12/68 (17%), Positives = 18/68 (26%), Gaps = 19/68 (27%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFA 584
L+ G QA GR + F + ++ S+ R TA
Sbjct: 30 PLSDTGHQQAAAAGRYLK----------------DLHFTN---VFVSNLQRAIQTAEIIL 70
Query: 585 KGLLALEG 592
L
Sbjct: 71 GNNLHSSA 78
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase,
metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus
plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Length = 266
Score = 29.3 bits (65), Expect = 6.9
Identities = 22/153 (14%), Positives = 45/153 (29%), Gaps = 4/153 (2%)
Query: 1025 SRSYDQQHQRPKGASKCCEGNCRHRHSISGQMCYLKNSTGYGFRRGLALSSSSGNSLFST 1084
+ + P A+ + H + G L N G + G SS + +
Sbjct: 85 PFGPEDLKRDPSLATTMAGMDPEH-SLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRF 143
Query: 1085 AVISGSSSAPNLRNMIPSTTNVTALDGFGGVPSIRPLETLHNALSLKHLDNFLGKMIRVI 1144
V+ S + + + T + D + ET H +K + K ++
Sbjct: 144 NVVRESEARLQVSRLYSMTEDEGVRDMLK---FLLARETQHQLQFMKAQEELEEKYGIIV 200
Query: 1145 PSKTPASSPPKYPSTPIEHSLSGARLGWSGPPS 1177
P ++ + S + G +
Sbjct: 201 PGDMKEIEHSEFSHVLMNFSDGDGSKAFEGQVA 233
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3
(6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...;
bifunctional enzyme, EDTA complex; HET: F6P EDT ADP;
2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B*
3qpu_A* 3qpv_A* 3qpw_A*
Length = 520
Score = 29.7 bits (66), Expect = 7.9
Identities = 10/59 (16%), Positives = 17/59 (28%), Gaps = 17/59 (28%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAF 583
L+ G+ A L + + DL+++ S TA A
Sbjct: 270 GLSSRGKKFASALSK-----------------FVEEQNLKDLRVWTSQLKSTIQTAEAL 311
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote
structure initiative; 1.75A {Saccharomyces cerevisiae}
PDB: 3lg2_A 3oi7_A* 3ll4_A*
Length = 265
Score = 29.3 bits (66), Expect = 8.6
Identities = 10/56 (17%), Positives = 13/56 (23%), Gaps = 12/56 (21%)
Query: 525 ELTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTA 580
LTP G Q G + I+ S R + T
Sbjct: 31 PLTPYGEGQMLRTGESVF---------RNNQFLNPDNITY---IFTSPRLRARQTV 74
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 29.1 bits (65), Expect = 9.3
Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 9/96 (9%)
Query: 945 STDAEDNTGSSKSTSDQDSPTSAEGPSVD--QSKGKFVLSQPIPITVKDLKRKNSVGDPC 1002
D E T +S PS D Q K + Q + ++ + P
Sbjct: 339 FDDKETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQ-------QQQAAYPPQ 391
Query: 1003 PSIVAPEGHPYRRPRSPNEEQRSRSYDQQHQRPKGA 1038
P+G+P + + P+GA
Sbjct: 392 GYAPPPQGYPPQGYPPQGYPPQGYPPQGYPPPPQGA 427
>3cww_A Insulysin, insulin-degrading enzyme, insulinase; A-beta degrading
enzyme, criptidase, kinins, hydrolase; 1.96A {Homo
sapiens} PDB: 3ofi_A 2wc0_A 3h44_A 3n56_A 3n57_A 2wby_A
3qz2_A 3e4z_A 2wk3_A 3e4a_A* 2g47_A 2g48_A 2g49_A 2g54_A
2g56_A 2jbu_A 3e50_A 2jg4_A 3hgz_A 2yb3_A* ...
Length = 990
Score = 29.4 bits (65), Expect = 9.6
Identities = 28/158 (17%), Positives = 45/158 (28%), Gaps = 25/158 (15%)
Query: 787 PLLKKIRADLQRNVEESEENVNRLNPQYSHGVSSPGRHVRTRLYFTSESHIHSLLTVLRY 846
PL + D + N +SE N +N + R + + H S
Sbjct: 143 PLFDESAKDREVNAVDSEHEKNVMNDAW--------RLFQLEKATGNPKHPFSKFGTGNK 194
Query: 847 GGLTESVHMNDEQWMRAM------EYVSMVSELNYMSQVVIMLYEDPTKDPTSDERFHIE 900
L + + + Y S N M+ VV+ ++ D +
Sbjct: 195 YTLETRPNQEGIDVRQELLKFHSAYYSS-----NLMAVVVL------GRESLDDLTNLVV 243
Query: 901 LHFSPGVNCCVQKNLPPGPGFRPHSRNDQKKNLPRIDQ 938
FS N V P F+ K +P D
Sbjct: 244 KLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDI 281
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1,
signaling protein, low PH, alternative splicing,
cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus}
PDB: 2ikq_A 2h0q_A
Length = 264
Score = 28.8 bits (64), Expect = 9.7
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 17/62 (27%)
Query: 526 LTPAGRIQAEELGRVFRCMYPGGQGNGLGLLRLHSTFRHDLKIYASDEGRVQMTAAAFAK 585
+T G +QA +G S D +Y S R TA K
Sbjct: 58 ITVFGCMQARLVGEALL----------------ESNTVID-HVYCSPSLRCVQTAHNILK 100
Query: 586 GL 587
GL
Sbjct: 101 GL 102
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein
structure initiative, joint center for structural G
transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Length = 298
Score = 28.9 bits (65), Expect = 9.8
Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 15/76 (19%)
Query: 57 AMAKKSQSKPMKEILTRLEEFEFIKMIVFSEETIQKPVDEWPIVD-----------CLIS 105
+ +S K IL +IVF + W + L+
Sbjct: 200 ESCRIIRSFGAKIILATHAS----GVIVFDGNFYEASFRSWSLEGRTGRGDTCTAAFLVG 255
Query: 106 FHSKGFPLEKAIKYAN 121
F K +EKA K+A
Sbjct: 256 FVFKKMSIEKATKFAA 271
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.134 0.395
Gapped
Lambda K H
0.267 0.0585 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 19,347,776
Number of extensions: 1205947
Number of successful extensions: 2786
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2746
Number of HSP's successfully gapped: 67
Length of query: 1266
Length of database: 6,701,793
Length adjustment: 105
Effective length of query: 1161
Effective length of database: 3,770,088
Effective search space: 4377072168
Effective search space used: 4377072168
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.4 bits)