Query psy10159
Match_columns 492
No_of_seqs 244 out of 1597
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 19:20:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10159.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10159hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ivz_A Nitrilase; alpha-beta s 100.0 9.2E-42 3.1E-46 336.9 23.3 235 14-297 2-239 (262)
2 3p8k_A Hydrolase, carbon-nitro 100.0 3.9E-41 1.3E-45 336.2 23.6 240 9-298 16-262 (281)
3 2dyu_A Formamidase; AMIF, CEK, 100.0 1.3E-40 4.5E-45 340.4 27.1 256 1-297 1-262 (334)
4 3hkx_A Amidase; alpha-beta-BET 100.0 1.9E-41 6.4E-46 338.9 20.2 240 11-298 18-261 (283)
5 2uxy_A Aliphatic amidase; nitr 100.0 4.1E-40 1.4E-44 337.6 24.9 255 2-297 1-262 (341)
6 2w1v_A Nitrilase-2, nitrilase 100.0 1.1E-39 3.7E-44 324.3 25.4 236 13-298 3-251 (276)
7 1f89_A 32.5 kDa protein YLR351 100.0 1.6E-39 5.4E-44 325.3 23.8 242 11-297 8-266 (291)
8 2e11_A Hydrolase; dimethylarse 100.0 9.4E-40 3.2E-44 322.9 16.9 232 13-297 3-245 (266)
9 2vhh_A CG3027-PA; hydrolase; 2 100.0 8.5E-39 2.9E-43 334.9 24.8 257 10-298 69-348 (405)
10 1uf5_A N-carbamyl-D-amino acid 100.0 6.7E-39 2.3E-43 322.2 21.2 249 12-298 2-278 (303)
11 1ems_A Nitfhit, NIT-fragIle hi 100.0 6.3E-37 2.2E-41 324.0 18.4 239 11-297 12-266 (440)
12 3n05_A NH(3)-dependent NAD(+) 100.0 1.9E-35 6.6E-40 323.4 21.4 247 12-298 3-263 (590)
13 4f4h_A Glutamine dependent NAD 100.0 1.5E-34 5.3E-39 314.0 24.4 254 11-297 4-267 (565)
14 3ilv_A Glutamine-dependent NAD 100.0 1.4E-34 4.7E-39 318.6 19.6 237 12-298 4-268 (634)
15 3sdb_A Glutamine-dependent NAD 100.0 3E-32 1E-36 301.7 20.7 241 9-296 8-278 (680)
16 3p8k_A Hydrolase, carbon-nitro 80.3 2.4 8.1E-05 41.0 6.1 45 106-164 200-245 (281)
17 2uxy_A Aliphatic amidase; nitr 77.3 4 0.00014 40.7 6.8 71 49-164 174-245 (341)
18 2dyu_A Formamidase; AMIF, CEK, 76.0 5.2 0.00018 39.7 7.3 71 49-164 174-245 (334)
19 1f89_A 32.5 kDa protein YLR351 72.3 4 0.00014 39.3 5.3 45 106-164 204-250 (291)
20 4f4h_A Glutamine dependent NAD 71.2 4.7 0.00016 43.2 5.9 74 49-165 177-251 (565)
21 3hkx_A Amidase; alpha-beta-BET 69.0 15 0.0005 35.3 8.5 68 212-280 49-129 (283)
22 2w1v_A Nitrilase-2, nitrilase 67.6 6.2 0.00021 37.6 5.4 46 106-164 188-234 (276)
23 2e11_A Hydrolase; dimethylarse 58.9 22 0.00077 33.4 7.5 47 105-164 182-229 (266)
24 3n05_A NH(3)-dependent NAD(+) 56.2 14 0.00048 39.6 6.2 45 106-164 200-245 (590)
25 1ems_A Nitfhit, NIT-fragIle hi 55.0 11 0.00039 38.5 5.0 46 106-164 204-250 (440)
26 1uf5_A N-carbamyl-D-amino acid 52.4 21 0.00071 34.2 6.2 42 108-164 217-260 (303)
27 3ivz_A Nitrilase; alpha-beta s 51.7 14 0.00048 34.8 4.7 40 215-254 32-86 (262)
28 2vhh_A CG3027-PA; hydrolase; 2 38.4 43 0.0015 34.0 6.2 70 210-280 106-195 (405)
29 3ilv_A Glutamine-dependent NAD 34.7 42 0.0014 36.3 5.7 46 105-164 201-247 (634)
30 1iuq_A Glycerol-3-phosphate ac 33.7 44 0.0015 33.6 5.1 68 34-120 200-267 (367)
31 3kws_A Putative sugar isomeras 33.5 55 0.0019 30.7 5.7 67 38-123 98-164 (287)
32 3obe_A Sugar phosphate isomera 28.2 69 0.0023 30.7 5.5 61 38-123 108-168 (305)
33 3cqj_A L-ribulose-5-phosphate 23.3 88 0.003 29.3 5.1 64 38-123 102-165 (295)
34 1k77_A EC1530, hypothetical pr 21.8 88 0.003 28.5 4.7 64 38-123 79-142 (260)
No 1
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=9.2e-42 Score=336.94 Aligned_cols=235 Identities=22% Similarity=0.284 Sum_probs=202.1
Q ss_pred eEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCC
Q psy10159 14 YTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDH 93 (492)
Q Consensus 14 ~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~ 93 (492)
+|||++|+++. +. +.+.|++++.+++++|+++|||||||||++++||.+. .++.+..+++.
T Consensus 2 ~rva~~Q~~~~--~~---------d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~-~~~~~~~~a~~------- 62 (262)
T 3ivz_A 2 VKVAYVQMNPQ--IL---------EPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFE-TREEVFEIAQK------- 62 (262)
T ss_dssp CEEEEEECCCC--TT---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCS-CHHHHHHHCBC-------
T ss_pred eEEEEEeccCC--CC---------CHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCC-CHHHHHHhcCc-------
Confidence 79999999987 44 8999999999999999999999999999999999863 21111111110
Q ss_pred CCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCCCCcc
Q psy10159 94 AIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFNLFLE 173 (492)
Q Consensus 94 ~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~Lf~e 173 (492)
...++.++.|+++|++++++|++|++++ +++++||++++|+++| ++++|+|+||+..
T Consensus 63 -------~~~~~~~~~l~~~a~~~~~~iv~G~~~~---------------~~~~~yNs~~~i~~~G-~~~~y~K~hL~~~ 119 (262)
T 3ivz_A 63 -------IPEGETTTFLMDVARDTGVYIVAGTAEK---------------DGDVLYNSAVVVGPRG-FIGKYRKIHLFYR 119 (262)
T ss_dssp -------TTTSHHHHHHHHHHHHHCCEEEEEEEEE---------------ETTEEEEEEEEEETTE-EEEEEECSSCCGG
T ss_pred -------cCCCHHHHHHHHHHHHcCcEEEEeEEEe---------------eCCcEEEEEEEEcCCe-eEEEEeecccCCc
Confidence 1245889999999999999999999888 5568999999999999 9999999999876
Q ss_pred CcccCCCCC-CceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHHHHHHHHhhhCCceEE
Q psy10159 174 YAFDTTPQP-EMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAVTVHSSWAFSMDVNLL 252 (492)
Q Consensus 174 ~~~~~~~g~-e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~~~~~~~A~en~v~vl 252 (492)
+..++.+|+ ++.+|+++ |+|||++||||++|||+++.++. +|+|+|++|++|+.. .+..+.++||+||+++++
T Consensus 120 E~~~f~~G~~~~~v~~~~-~~~ig~~IC~D~~fpe~~r~~~~-~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv 193 (262)
T 3ivz_A 120 EKFFFEPGDLGFRVFDLG-FMKVGVMICFDWFFPESARTLAL-KGADVIAHPANLVMP----YAPRAMPIRALENKVYTV 193 (262)
T ss_dssp GGGTCBCCCSCSCEEECS-SCEEEECCGGGGGSHHHHHHHHH-TTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEE
T ss_pred hhceEeCCCCCceEEEEC-CEEEEEEEecCCCchHHHHHHHH-CCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEE
Confidence 666889998 89999999 56999999999999999999999 999999999999763 355678999999999999
Q ss_pred EeCCcCCC--CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 253 SSNYNNPA--QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 253 aan~~~~~--~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
+||..|.. ..+.|.|.+++|+|++++..+.+ ++++++++||+..
T Consensus 194 ~~n~~G~~~~~~~~G~S~ii~p~G~il~~~~~~-~~~~~~~~id~~~ 239 (262)
T 3ivz_A 194 TADRVGEERGLKFIGKSLIASPKAEVLSMASET-EEEVGVAEIDLSL 239 (262)
T ss_dssp EEECCSEETTEECCCCCEEECTTSCEEEECCSS-CCEEEEEECCHHH
T ss_pred EECCCCcCCCceEeeeEEEECCCCCEeecCCCC-CceEEEEEEcHHH
Confidence 99988753 34789999999999999998754 6789999999774
No 2
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.9e-41 Score=336.19 Aligned_cols=240 Identities=17% Similarity=0.216 Sum_probs=202.8
Q ss_pred CCCCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCC
Q psy10159 9 SSREFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIP 88 (492)
Q Consensus 9 ~~~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp 88 (492)
+...+++||++|+++. +. +.+.|++++++++++|+++|||||||||++++||... .+....+
T Consensus 16 ~~~~~~kva~~Q~~~~--~~---------d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~----~~~~~a~--- 77 (281)
T 3p8k_A 16 PRGSHMKVQIYQLPIV--FG---------DSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLE----HLNEKAD--- 77 (281)
T ss_dssp CTTSEEEEEEEECCCC--TT---------CHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGG----GHHHHSE---
T ss_pred ccCCCcEEEEEeccCC--cC---------CHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChh----HHHHhhh---
Confidence 4456799999999987 44 7899999999999999999999999999999999751 1110010
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEccc-ccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeec
Q psy10159 89 TPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLF-EIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRK 167 (492)
Q Consensus 89 ~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~-ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK 167 (492)
....+.++.|+++|++++++|++|.. ++ +++++||++++|+|+|+++++|+|
T Consensus 78 ------------~~~~~~~~~l~~la~~~~i~iv~G~~~~~---------------~~~~~yNs~~~i~~~G~i~~~y~K 130 (281)
T 3p8k_A 78 ------------NNLGQSFSFIKHLAEKYKVDIVAGSVSNI---------------RNNQIFNTAFSVNKSGQLINEYDK 130 (281)
T ss_dssp ------------ETTHHHHHHHHHHHHHHTCEEEEEEEEEE---------------ETTEEEEEEEEECTTSCEEEEEEC
T ss_pred ------------ccCcHHHHHHHHHHhhCCeEEEEeeeEEc---------------cCCcEEEEEEEEcCCCeEEEEEee
Confidence 12468899999999999999999965 44 456899999999999999999999
Q ss_pred CCCCc--cCcccCCCCCCc-eEEEc-CCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHHHHHHHH
Q psy10159 168 FNLFL--EYAFDTTPQPEM-ITFNT-DFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAVTVHSSW 243 (492)
Q Consensus 168 ~~Lf~--e~~~~~~~g~e~-~vf~t-~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~~~~~~~ 243 (492)
+||+. .+..++.+|++. .+|++ + |+|||++||||++|||+++.+++ +|||+|++|++|+... ...+..+.++|
T Consensus 131 ~hL~~~f~E~~~f~~G~~~~~v~~~~~-~~~ig~~IC~D~~fpe~~r~~~~-~Gadli~~psa~~~~~-~~~~~~~~~ar 207 (281)
T 3p8k_A 131 VHLVPMLREHEFLTAGEYVAEPFQLSD-GTYVTQLICYDLRFPELLRYPAR-SGAKIAFYVAQWPMSR-LQHWHSLLKAR 207 (281)
T ss_dssp SCCCTTTTGGGTCCCCSSCCCCEECTT-CCEEEEEEGGGGGCTHHHHHHHH-TTCCEEEEEECCBGGG-HHHHHHHHHHH
T ss_pred EECCCCcCccccCcCCCCCceeEEeCC-CcEEEEEEecCCCCcHHHHHHHH-CCCCEEEECCCCCCcc-HHHHHHHHHHH
Confidence 99986 455578999998 99999 8 56999999999999999999999 9999999999997643 33445678899
Q ss_pred hhhCCceEEEeCCcCCC--CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 244 AFSMDVNLLSSNYNNPA--QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 244 A~en~v~vlaan~~~~~--~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
|+||++++++||..|.. ..+.|.|++++|+|++++. +. .++++++++||++..
T Consensus 208 A~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~-~~-~~e~~l~~~id~~~~ 262 (281)
T 3p8k_A 208 AIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGE-LN-ESADILTVDLNLNEV 262 (281)
T ss_dssp HHHHTSEEEEEECEEECSSCEEECCCEEECTTSCEEEE-CC-SSCEEEEEEEETHHH
T ss_pred HHHcCCEEEEEccCcCCCCcEEeeeEEEECCCCCEEEe-cC-CCCeEEEEEEcHHHH
Confidence 99999999999988643 4467999999999999999 54 478999999998743
No 3
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=1.3e-40 Score=340.39 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=201.3
Q ss_pred CcccccCcCCCCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhc--CCCcEEEcCCCCcCCCCCCCccc
Q psy10159 1 MVQHARKSSSREFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASN--YDVDIIVFPECGLAGTPVPKRRA 78 (492)
Q Consensus 1 ~~~~~~s~~~~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~--~gadIIVfPE~~l~g~~~~~~r~ 78 (492)
|++|..-.+..+.++||++|+++. ..+ ...+.+.|++++.+++++|++ +++|||||||++++||.+. .+
T Consensus 1 m~~~~~~~~~~~~~~Va~vQ~~i~--~~~-----~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~--~~ 71 (334)
T 2dyu_A 1 MGSIGSMGKPIEGFLVAAIQFPVP--IVN-----SRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTA--KW 71 (334)
T ss_dssp ------------CEEEEEECCBCC--CCC-----SHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTT--TT
T ss_pred CCCccCcccCCCccEEEEEecCCc--cCC-----chhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCC--hh
Confidence 677777777777899999999854 110 123799999999999999987 7999999999999998652 11
Q ss_pred CcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCC-eeEEEEEEEcC
Q psy10159 79 DVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRN-YHYNTNLVFDR 157 (492)
Q Consensus 79 ~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~-~~yNT~vvf~~ 157 (492)
....+++ ...++.++.|+++|++++++|++|+.++.. ++. .+||++++|+|
T Consensus 72 ~~~~~a~---------------~~~~~~~~~l~~~a~~~~i~iv~G~~e~~~-------------~~~~~~yNsa~vi~p 123 (334)
T 2dyu_A 72 LSEEFLL---------------DVPGKETELYAKACKEAKVYGVFSIMERNP-------------DSNKNPYNTAIIIDP 123 (334)
T ss_dssp TSGGGCB---------------CSSSHHHHHHHHHHHHHTCEEEEEEEECCS-------------STTSCCEEEEEEECT
T ss_pred HHHHhhc---------------cCCCHHHHHHHHHHHHhCeEEEEeeEEECC-------------CCCceeEEEEEEECC
Confidence 1111111 124678999999999999999999988731 222 39999999999
Q ss_pred CCcEEeeeecCCCCccCcccCCCCCCce-EEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHH
Q psy10159 158 QGQIIAKYRKFNLFLEYAFDTTPQPEMI-TFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTA 236 (492)
Q Consensus 158 ~G~ii~rYrK~~Lf~e~~~~~~~g~e~~-vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~ 236 (492)
+|+++++|||+|||+|.. .+.+|.+.. +|+++.|+|||++||||++|||+++.+++ +|||+|++|++|+...+ .++
T Consensus 124 ~G~i~~~YrK~hlf~e~~-~f~~G~~~~~v~~~~~g~~iG~~ICyD~~fpe~~r~~~~-~Gadlil~psaw~~~~~-~~~ 200 (334)
T 2dyu_A 124 QGEIILKYRKLFPWNPIE-PWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAY-KGCNVYIRISGYSTQVN-DQW 200 (334)
T ss_dssp TSCEEEEEECSSCCTTTC-CCCCCCSCCCCEECGGGCEEEEEEGGGGGCHHHHHHHHH-TTCSEEEEEESSCTTSH-HHH
T ss_pred CCCEEEEEeeccCCCCcc-cCcCCCCCceeEECCCCCEEEEEEECCCCchHHHHHHHH-cCCCEEEEeCCCCCCcH-HHH
Confidence 999999999999998765 577888765 99997688999999999999999999999 99999999999986543 355
Q ss_pred HHHHHHHhhhCCceEEEeCCcCCC--CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 237 VTVHSSWAFSMDVNLLSSNYNNPA--QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 237 ~~~~~~~A~en~v~vlaan~~~~~--~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
..+.++||+||++++++||..|.. ..+.|.|++++|+|++++..+.+ ++++++++||+..
T Consensus 201 ~~~~~arA~En~~~vv~an~~G~~~~~~~~G~S~Iidp~G~vla~~~~~-~e~il~a~idl~~ 262 (334)
T 2dyu_A 201 ILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNFDGTTLVQGHRN-PWEIVTGEIYPKM 262 (334)
T ss_dssp HHHHHHHHHHHTCEEEEEECSBSSSSCCCCCEEEEECTTSCEEEECCCC-TTCEEEEEECHHH
T ss_pred HHHHHHHHHhCCCEEEEECCCcCCCCeeeeeEEEEECCCCCEeeecCCC-CCeEEEEEEcHHH
Confidence 677899999999999999998753 45779999999999999998643 6899999999764
No 4
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=1.9e-41 Score=338.85 Aligned_cols=240 Identities=17% Similarity=0.197 Sum_probs=202.4
Q ss_pred CCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCC
Q psy10159 11 REFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTP 90 (492)
Q Consensus 11 ~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~ 90 (492)
...++||++|+++. .. +.+.|++++++++++|+++|||||||||++++||... + +. ....+
T Consensus 18 ~~~~rva~~Q~~~~--~~---------d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~---d-~~---~~~a~- 78 (283)
T 3hkx_A 18 GSHMRIALMQHTAR--PL---------DPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPS---Q-IC---AQVSA- 78 (283)
T ss_dssp TEEEEEEEEEBCCC--TT---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHH---H-HH---HHCCH-
T ss_pred CCccEEEEEeCCCC--CC---------CHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChH---H-HH---HHhcc-
Confidence 44699999999988 43 7899999999999999999999999999999999751 0 11 01100
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCCC
Q psy10159 91 EDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFNL 170 (492)
Q Consensus 91 ~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~L 170 (492)
...++.++.|+++|++++++|++|++++. +++++||++++|+|+|+++++|+|+||
T Consensus 79 ----------~~~~~~~~~l~~~a~~~~i~iv~G~~~~~--------------~~~~~yNs~~~i~~~G~i~~~y~K~hL 134 (283)
T 3hkx_A 79 ----------EQVDAARSRLRGIARDRGIALVWSLPGPE--------------GPEQRGITAELADEHGEVLASYQKVQL 134 (283)
T ss_dssp ----------HHHHHHHHHHHHHHHHTTSEEEECCBCSS--------------CTTTCCBEEEEECTTSCEEEEEECSSC
T ss_pred ----------ccCCHHHHHHHHHHHHhCCEEEEEEEEEc--------------CCCCEEEEEEEEcCCCcEEEEEccccC
Confidence 12468899999999999999999998873 225799999999999999999999999
Q ss_pred Ccc-CcccCCCCCC-ceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHHHHHHHHhhhCC
Q psy10159 171 FLE-YAFDTTPQPE-MITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAVTVHSSWAFSMD 248 (492)
Q Consensus 171 f~e-~~~~~~~g~e-~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~~~~~~~A~en~ 248 (492)
|++ +..++.+|++ +.+|+++ |+|||++||||++|||+++.++. +|||+|++|++|+.... ..+..+.++||+||+
T Consensus 135 ~~~~E~~~f~~G~~~~~v~~~~-~~~ig~~IC~D~~fpe~~r~l~~-~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~ 211 (283)
T 3hkx_A 135 YGPEEKAAFVPGEQPPPVLSWG-GRQLSLLVCYDVEFPEMVRAAAA-RGAQLVLVPTALAGDET-SVPGILLPARAVENG 211 (283)
T ss_dssp CHHHHHHHSCCCCSCCCEEEET-TEEEEECCGGGGGSHHHHHHHHH-TTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHT
T ss_pred CCcCchhhccCCCCCceEEEEC-CEEEEEEEecCcCCHHHHHHHHH-CCCCEEEECCCCCCccc-HHHHHHHHHHHHHhC
Confidence 976 5557899987 6799999 56999999999999999999999 99999999999986544 345567899999999
Q ss_pred ceEEEeCCcCCC--CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 249 VNLLSSNYNNPA--QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 249 v~vlaan~~~~~--~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
+++++||..|.. ..++|.|++++|+|++++..+ + ++++++++||++..
T Consensus 212 ~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~~~-~-~e~~l~a~id~~~~ 261 (283)
T 3hkx_A 212 ITLAYANHCGPEGGLVFDGGSVVVGPAGQPLGELG-V-EPGLLVVDLPDQSQ 261 (283)
T ss_dssp CEEEEECBEEEETTEEEECCCEEECTTSCEEEECC-S-SCEEEEEEEEC---
T ss_pred CEEEEEccccCCCCeEEeeEEEEECCCCCEEEecC-C-CCeEEEEEECHHHH
Confidence 999999987743 357899999999999999986 3 78999999999854
No 5
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=4.1e-40 Score=337.61 Aligned_cols=255 Identities=20% Similarity=0.212 Sum_probs=208.1
Q ss_pred cccccCcCCCCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhc--CCCcEEEcCCCCcCCCCCCCcccC
Q psy10159 2 VQHARKSSSREFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASN--YDVDIIVFPECGLAGTPVPKRRAD 79 (492)
Q Consensus 2 ~~~~~s~~~~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~--~gadIIVfPE~~l~g~~~~~~r~~ 79 (492)
|.|..-....++++||++|+++. ..+ ...+.+.|++++.+++++|++ +|+|||||||++++||.+ ..+.
T Consensus 1 ~~~~~~~~~~~~~kValvQ~~i~--~~~-----~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~--~~~~ 71 (341)
T 2uxy_A 1 MRHGDISSSNDTVGVAVVNYKMP--RLH-----TAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMY--DPAE 71 (341)
T ss_dssp CBCSCSCCCTTEEEEEEECCBCC--BCC-----SHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCC--SHHH
T ss_pred CCCCCcCCCCCccEEEEEECCcc--cCC-----CccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCC--CHHH
Confidence 34555555567899999999854 111 123899999999999999987 799999999999999865 2111
Q ss_pred cccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEccc-ccccCCCCCCCCcccCCC--CCeeEEEEEEEc
Q psy10159 80 VKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLF-EIVACPSDDQSSICRGQD--RNYHYNTNLVFD 156 (492)
Q Consensus 80 ~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~-ek~~c~~~~~~~~cp~~~--~~~~yNT~vvf~ 156 (492)
+..+++ ...++.++.|+++|++++++|++|+. ++.+ + ++++||++++|+
T Consensus 72 ~~~~a~---------------~~~~~~~~~l~~~a~~~~i~iv~G~~ge~~~-------------~~~~~~~yNsa~vi~ 123 (341)
T 2uxy_A 72 MMETAV---------------AIPGEETEIFSRACRKANVWGVFSLTGERHE-------------EHPRKAPYNTLVLID 123 (341)
T ss_dssp HHHHCB---------------CSSSHHHHHHHHHHHHHTCEEEEEEEEECCT-------------TTTSSCCEEEEEEEC
T ss_pred HHHHhc---------------cCCCHHHHHHHHHHHHhCcEEEEEeeeeEcC-------------CCCCCceEEEEEEEC
Confidence 111111 12367899999999999999999988 7731 2 245999999999
Q ss_pred CCCcEEeeeecCCCCccCcccCCCCCCceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHH
Q psy10159 157 RQGQIIAKYRKFNLFLEYAFDTTPQPEMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTA 236 (492)
Q Consensus 157 ~~G~ii~rYrK~~Lf~e~~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~ 236 (492)
|+|+++++|||+|||+|.. .+.+|.+..+|+++.|+|||++||||++|||+++.+++ +||++|++|++|+...+ .++
T Consensus 124 p~G~i~~~Y~K~hlf~e~~-~f~pG~~~~v~~~~~G~riG~~ICyD~~fpe~~r~l~~-~Gadlll~psa~~~~~~-~~~ 200 (341)
T 2uxy_A 124 NNGEIVQKYRKIIPWCPIE-GWYPGGQTYVSEGPKGMKISLIIXDDGNYPEIWRDCAM-KGAELIVRCQGYMYPAK-DQQ 200 (341)
T ss_dssp TTSCEEEEEECSSCCTTTC-CCBCCCCCCCEECGGGCEEEEEEGGGGGSHHHHHHHHH-TTCSEEEEEECCBTTCH-HHH
T ss_pred CCCcEEEEEEeeccCCCcc-ceeCCCCceEEECCCCCEEEEEEccCCcCcHHHHHHHH-cCCCEEEEcCCCCCCcH-HHH
Confidence 9999999999999998765 57889888999997789999999999999999999999 99999999999976433 356
Q ss_pred HHHHHHHhhhCCceEEEeCCcCCC--CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 237 VTVHSSWAFSMDVNLLSSNYNNPA--QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 237 ~~~~~~~A~en~v~vlaan~~~~~--~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
..+.++||+||++++++||..|.. ..+.|.|++++|+|++++..+.+ ++++++++||+..
T Consensus 201 ~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Iidp~G~vla~~~~~-~e~il~a~id~~~ 262 (341)
T 2uxy_A 201 VMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAIIGFDGRTLGECGEE-EMGIQYAQLSLSQ 262 (341)
T ss_dssp HHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEECTTSCEEEECCSC-TTCEEEEEEEHHH
T ss_pred HHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEECCCCCEEEECCCC-CCEEEEEEEcHHH
Confidence 678899999999999999988743 45789999999999999998754 6899999999764
No 6
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=324.31 Aligned_cols=236 Identities=19% Similarity=0.229 Sum_probs=198.5
Q ss_pred ceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCC
Q psy10159 13 FYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPED 92 (492)
Q Consensus 13 ~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~ 92 (492)
.++||++|+++. . +.+.|++++++++++|+++++|||||||++++||... .+..+.+
T Consensus 3 ~~~va~vQ~~~~---~---------d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~----~~~~~~~------- 59 (276)
T 2w1v_A 3 TFRLALIQLQVS---S---------IKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTT----YFPDYAE------- 59 (276)
T ss_dssp EEEEEEEECCCC---S---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTT----THHHHCB-------
T ss_pred ccEEEEEecccc---C---------CHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHH----HHHHHhc-------
Confidence 589999999854 3 6889999999999999999999999999999998651 1111111
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcc-cccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCCCC
Q psy10159 93 HAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNL-FEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFNLF 171 (492)
Q Consensus 93 ~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~-~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~Lf 171 (492)
...++.++.|+++|++++++|++|. .++ +++++||++++|+|+|+++++|||+|||
T Consensus 60 --------~~~~~~~~~l~~~a~~~~~~iv~G~~~~~---------------~~~~~yNs~~~i~~~G~i~~~y~K~hL~ 116 (276)
T 2w1v_A 60 --------KIPGESTQKLSEVAKESSIYLIGGSIPEE---------------DAGKLYNTCSVFGPDGSLLVKHRKIHLF 116 (276)
T ss_dssp --------CSSSHHHHHHHHHHHHHTSEEECCCEEEE---------------ETTEEEEEEEEECTTSCEEEEEECSSCC
T ss_pred --------cCCCHHHHHHHHHHHHcCeEEEecceeec---------------CCCcEEEEEEEECCCCcEEEEEeccccc
Confidence 1235789999999999999999995 444 3458999999999999999999999997
Q ss_pred cc---------CcccCCCCCCceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHHHHHHH
Q psy10159 172 LE---------YAFDTTPQPEMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAVTVHSS 242 (492)
Q Consensus 172 ~e---------~~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~~~~~~ 242 (492)
+. +..++.+|.++.+|+++ |+|||++||||++|||+++.+++ +|+|+|++|++|.......++..+.++
T Consensus 117 ~~~vP~~e~~~E~~~f~~G~~~~v~~~~-~~~ig~~ICyD~~fpe~~r~~~~-~ga~ll~~ps~~~~~~~~~~~~~~~~~ 194 (276)
T 2w1v_A 117 DIDVPGKITFQESKTLSPGDSFSTFDTP-YCKVGLGICYDMRFAELAQIYAQ-RGCQLLVYPGAFNLTTGPAHWELLQRA 194 (276)
T ss_dssp EEEETTTEEEEGGGTCCCCCCCCEEECS-SCEEEECCGGGGGCHHHHHHHHH-TTEEEEEEECCCCTTHHHHHHHHHHHH
T ss_pred CcccCccccccccccccCCCCceeEEeC-CceEEEEEEeccccHHHHHHHHH-cCCCEEEECCcCCCcCCHHHHHHHHHH
Confidence 42 33468899999999999 56999999999999999999998 999999999998764433456668899
Q ss_pred HhhhCCceEEEeCCcCCC---CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 243 WAFSMDVNLLSSNYNNPA---QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 243 ~A~en~v~vlaan~~~~~---~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
||+||+++|++||..|.. ..+.|.|++++|+|++++..+. ++++++++||+...
T Consensus 195 rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~v~~~~~~--~e~~l~~~id~~~~ 251 (276)
T 2w1v_A 195 RAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAGT--EETILYSDIDLKKL 251 (276)
T ss_dssp HHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTSCEEEECCS--SSEEEEEEEEHHHH
T ss_pred HHHHcCcEEEEecccccCCCCceeeeEeEEECCCCCEeEEcCC--CCeEEEEEEcHHHH
Confidence 999999999999998753 4577999999999999999864 78999999998743
No 7
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.6e-39 Score=325.35 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=197.9
Q ss_pred CCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHH--hcCCCcEEEcCCCCcCCCCCCCcccCcccccccCC
Q psy10159 11 REFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNA--SNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIP 88 (492)
Q Consensus 11 ~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A--~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp 88 (492)
.+.++||++|+++. .. +.+.|++++.+++++| +++|+|||||||++++||... .+..+.+.+
T Consensus 8 ~~~~~va~vQ~~~~--~~---------d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~----~~~~~~~~~- 71 (291)
T 1f89_A 8 SQKIKVALVQLSGS--SP---------DKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTD----QFRKYSEVI- 71 (291)
T ss_dssp SSCEEEEEEECCCC--CS---------CHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHH----HHHHHTTBC-
T ss_pred cccceEEEEeccCC--cC---------CHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChH----HHHHHhhhh-
Confidence 34699999999855 23 7889999999999999 899999999999999988541 111111111
Q ss_pred CCCCCCCCCCCCCCc--hHHHHHHHHHHHhCCcEEEEcc-cccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeee
Q psy10159 89 TPEDHAIPYQEPHKY--DKILTMLSKAAKDSNMYVVVNL-FEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKY 165 (492)
Q Consensus 89 ~~~~~~~pc~~~~~~--~~~l~~Ls~lAr~~~i~IV~g~-~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rY 165 (492)
... ++.++.|+++|++++++|++|. .++.. +++++||++++|+++|+++++|
T Consensus 72 ------------~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~~-------------~~~~~yNs~~~i~~~G~i~~~y 126 (291)
T 1f89_A 72 ------------NPKEPSTSVQFLSNLANKFKIILVGGTIPELDP-------------KTDKIYNTSIIFNEDGKLIDKH 126 (291)
T ss_dssp ------------CSSSCCHHHHHHHHHHHHSSCEEECCCEEEECT-------------TTCCEEEEEEEECTTSCEEEEE
T ss_pred ------------ccCCCChHHHHHHHHHHHcCcEEEeceeecccC-------------CCCceEEEEEEECCCCcEEeEE
Confidence 012 5789999999999999999995 55510 1257999999999999999999
Q ss_pred ecCCCCccC---------cccCCCCCCceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHH
Q psy10159 166 RKFNLFLEY---------AFDTTPQPEMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTA 236 (492)
Q Consensus 166 rK~~Lf~e~---------~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~ 236 (492)
||+|||+|. ..++.+|.++.+|+++ |+|||++||||++|||+++.+++ +|+|+|++|++|.......++
T Consensus 127 ~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~-~~~ig~~ICyD~~fpe~~r~l~~-~Ga~ll~~ps~~~~~~~~~~~ 204 (291)
T 1f89_A 127 RKVHLFDVDIPNGISFHESETLSPGEKSTTIDTK-YGKFGVGICYDMRFPELAMLSAR-KGAFAMIYPSAFNTVTGPLHW 204 (291)
T ss_dssp ECCCCC----------HHHHSCCCCCCCEEEEET-TEEEEECCGGGGGCHHHHHHHHH-TTEEEEEEECCCBTTHHHHHH
T ss_pred eeeccCCCccCccccccccccccCCCCCceEecC-CeeEEEEEecccCchHHHHHHHh-hCCCEEEECCcCCCCCcHHHH
Confidence 999998732 2367899999999999 56999999999999999999999 999999999998754334456
Q ss_pred HHHHHHHhhhCCceEEEeCCcCC---CCcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 237 VTVHSSWAFSMDVNLLSSNYNNP---AQYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 237 ~~~~~~~A~en~v~vlaan~~~~---~~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
..+.++||+||+++|++||..|. ...+.|.|++++|+|++++..+. ++++++++||+..
T Consensus 205 ~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~vl~~~~~--~e~~l~~~id~~~ 266 (291)
T 1f89_A 205 HLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPRGKIVAEAGE--GEEIIYAELDPEV 266 (291)
T ss_dssp HHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTTSCEEEECCS--SSEEEEEEECHHH
T ss_pred HHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCCCCEEEecCC--CCeEEEEEECHHH
Confidence 67889999999999999999883 35678999999999999999863 7899999999764
No 8
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.4e-40 Score=322.92 Aligned_cols=232 Identities=14% Similarity=0.124 Sum_probs=196.5
Q ss_pred ceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCC
Q psy10159 13 FYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPED 92 (492)
Q Consensus 13 ~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~ 92 (492)
.++||++|+++. +. +.+.|++++.+++++| ++|+|||||||++++||... .....+
T Consensus 3 ~~kva~~Q~~~~--~~---------d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~---------~~~~a~--- 58 (266)
T 2e11_A 3 DLRISLVQGSTR--WH---------DPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNE---------AIDKAE--- 58 (266)
T ss_dssp CEEEEEEECCCC--TT---------CHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSG---------GGGGCE---
T ss_pred ccEEEEEeCCCC--cC---------CHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChh---------HHHhhc---
Confidence 489999999987 44 7889999999999999 88999999999999999531 000100
Q ss_pred CCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCCCCc
Q psy10159 93 HAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFNLFL 172 (492)
Q Consensus 93 ~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~Lf~ 172 (492)
...++.++.|+++|++++++|++|+.++ +++++||++++|+++|+++ +|+|+||+.
T Consensus 59 --------~~~~~~~~~l~~~a~~~~~~iv~G~~~~---------------~~~~~yNs~~~i~~~G~i~-~y~K~hL~~ 114 (266)
T 2e11_A 59 --------DMDGPTVAWIRTQAARLGAAITGSVQLR---------------TEHGVFNRLLWATPDGALQ-YYDKRHLFR 114 (266)
T ss_dssp --------ETTSHHHHHHHHHHHHHTSEEEEEEEEE---------------ETTEEEEEEEEECTTSCEE-EEECSSCCG
T ss_pred --------cCCCHHHHHHHHHHHHhCCEEEEeeeEc---------------cCCcEEEEEEEECCCCCEE-EEeeeccCC
Confidence 1245789999999999999999999987 3458999999999999999 999999984
Q ss_pred --cCcccCCCCCCceEEEcCCCCeEEEEEeccCCChHHHHHHH---HhC---CCcEEEEeCCCCCCChhhHHHHHHHHHh
Q psy10159 173 --EYAFDTTPQPEMITFNTDFGVTFGTFTCFDILFPQPAVQLV---KQK---NITDFVYTAAWMSELPLLTAVTVHSSWA 244 (492)
Q Consensus 173 --e~~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~---~~~---Gad~iv~ptaw~~~~p~l~~~~~~~~~A 244 (492)
++..++.+|++..+|+++ |+|||++||||++|||+++.++ + . |+|+|++|++|+.... ..+..+.++||
T Consensus 115 ~~~E~~~f~~G~~~~v~~~~-~~~ig~~ICyD~~fpe~~r~~~~~~~-~~~~ga~~i~~~s~w~~~~~-~~~~~~~~~rA 191 (266)
T 2e11_A 115 FGNEHLRYAAGRERLCVEWK-GWRINPQVCYDLRFPVFCRNRFDVER-PGQLDFDLQLFVANWPSARA-YAWKTLLRARA 191 (266)
T ss_dssp GGTTTTTSBCCCSCCCEEET-TEEEEEEEGGGGGCTTTTCCCBSSSS-TTSBSCSEEEEEECCCGGGH-HHHHHHHHHHH
T ss_pred CcChhhhccCCCCceEEEEC-CEEEEEEEEeccCCHHHHHHHHhhhh-ccCCCCcEEEEeCCCCCCch-HHHHHHHHHHH
Confidence 455578899999999999 5699999999999999999865 4 4 9999999999986433 24556789999
Q ss_pred hhCCceEEEeCCcCCC---CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 245 FSMDVNLLSSNYNNPA---QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 245 ~en~v~vlaan~~~~~---~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
+||++++++||..|.. ..++|.|.+++|+|++++.++ + ++++++++||+..
T Consensus 192 ~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v~~~~~-~-~e~~l~~~id~~~ 245 (266)
T 2e11_A 192 IENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIR-E-QEQVVTTTISAAA 245 (266)
T ss_dssp HHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCEEEEEE-S-SCEEEEEEECHHH
T ss_pred HhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCceeeecC-C-CCeEEEEEEcHHH
Confidence 9999999999998754 357899999999999999987 4 7899999999764
No 9
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=8.5e-39 Score=334.93 Aligned_cols=257 Identities=16% Similarity=0.117 Sum_probs=200.5
Q ss_pred CCCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCC
Q psy10159 10 SREFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPT 89 (492)
Q Consensus 10 ~~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~ 89 (492)
....++||++|+++. .. ..+....+.++|++++.+++++|+++|||||||||++++||.+. .++. .+|.+
T Consensus 69 ~~~~~rVAlvQ~~i~--~~--~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~-~~~~-~~~~~---- 138 (405)
T 2vhh_A 69 KRRIVRVGAIQNSIV--IP--TTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFC-TREK-FPWCE---- 138 (405)
T ss_dssp CCCEEEEEEEECCCC--SC--SSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC-----------C----
T ss_pred CCCCCEEEEEecccc--cc--ccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCccccccccc-ccch-hhHHH----
Confidence 345799999999876 21 01122348999999999999999999999999999999998652 1110 00110
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCC
Q psy10159 90 PEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFN 169 (492)
Q Consensus 90 ~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~ 169 (492)
..++...++.++.|+++|++++++|++|+.++.. . .++++|||+++|+|+|+++++|||+|
T Consensus 139 -------~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~-----------~-~~~~~yNsa~vi~p~G~i~~~YrK~h 199 (405)
T 2vhh_A 139 -------FAEEAENGPTTKMLAELAKAYNMVIIHSILERDM-----------E-HGETIWNTAVVISNSGRYLGKHRKNH 199 (405)
T ss_dssp -------CCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEET-----------T-TTTEEEEEEEEECTTSCEEEEEECSC
T ss_pred -------HHhhccCCHHHHHHHHHHHHCCEEEEEeceeccc-----------C-CCCcEEEEEEEECCCCeEEEEEeccc
Confidence 0000124688999999999999999999998731 0 24689999999999999999999999
Q ss_pred CCc----cCcccCCCCCC-ceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHHHHHHHHh
Q psy10159 170 LFL----EYAFDTTPQPE-MITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAVTVHSSWA 244 (492)
Q Consensus 170 Lf~----e~~~~~~~g~e-~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~~~~~~~A 244 (492)
|+. .+..++.+|.+ +.+|+|++ +|||++||||++|||.++.++. +||++|++|++|+.......+..+.++||
T Consensus 200 L~~~g~f~E~~~f~~G~~~~~vf~~~~-~riG~~ICyD~~fPe~~r~la~-~GAdill~psa~~~~~~~~~w~~l~raRA 277 (405)
T 2vhh_A 200 IPRVGDFNESTYYMEGNTGHPVFETEF-GKLAVNICYGRHHPQNWMMFGL-NGAEIVFNPSATIGRLSEPLWSIEARNAA 277 (405)
T ss_dssp CCC----------CCCCSCCCEEEETT-EEEEECCGGGGGCHHHHHHHHH-TTCSEEEEEECCBCTTTHHHHHHHHHHHH
T ss_pred CCCCCCcCcccceeCCCCCCeeEEECC-EEEEEEEeccccChHHHHHHHH-cCCCEEEEcccCCCCCCHHHHHHHHHHHH
Confidence 964 23346788874 89999994 5999999999999999999998 99999999999987654445666789999
Q ss_pred hhCCceEEEeCCcCCC------------------CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 245 FSMDVNLLSSNYNNPA------------------QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 245 ~en~v~vlaan~~~~~------------------~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
+||+++|++||..|.. ..+.|.|++++|+|++++..+.+ ++++++++||+...
T Consensus 278 iEn~~~Vv~aN~vG~~~~~~~~~~~~g~~~~~~~~~f~G~S~IidP~G~vla~~~~~-~e~il~aeiDl~~~ 348 (405)
T 2vhh_A 278 IANSYFTVPINRVGTEQFPNEYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRD-KDGLLVVELDLNLC 348 (405)
T ss_dssp HHHTSEEEEEECEECCCCC-----------------EECCCCCBCTTSCBCCCCCSS-SCEEEEEEEETTHH
T ss_pred HHcCceEEEeccccccccccccccccCccccccCceeccccceECCCCCEeeccCCC-CCeEEEEEECHHHH
Confidence 9999999999997754 23579999999999999887643 68999999999854
No 10
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=6.7e-39 Score=322.23 Aligned_cols=249 Identities=15% Similarity=0.138 Sum_probs=195.4
Q ss_pred CceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCC
Q psy10159 12 EFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPE 91 (492)
Q Consensus 12 ~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~ 91 (492)
.+++||++|+++. .. ..+.+.|++++.+++++|+++|||||||||++++||... +...++.
T Consensus 2 ~~~~va~~Q~~~~--~~-------~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~----------~~~~~~~ 62 (303)
T 1uf5_A 2 RQMILAVGQQGPI--AR-------AETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPR----------WHFTDEA 62 (303)
T ss_dssp CEEEEEEEEBCCC--CT-------TCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGG----------SCCCCHH
T ss_pred ccEEEEEEEecCc--cc-------ccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCcc----------ccccchh
Confidence 4699999999887 31 027999999999999999999999999999999999641 0000000
Q ss_pred --CCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCC--CeeEEEEEEEcCCCcEEeeeec
Q psy10159 92 --DHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDR--NYHYNTNLVFDRQGQIIAKYRK 167 (492)
Q Consensus 92 --~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~--~~~yNT~vvf~~~G~ii~rYrK 167 (492)
..+... ...++.++.|+++|++++++|++|+.++.. ++ .++||++++|+++|+++++|||
T Consensus 63 ~~~~~~~~---~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~-------------~~~~~~~yNs~~~i~~~G~i~~~y~K 126 (303)
T 1uf5_A 63 ELDSFYET---EMPGPVVRPLFEKAAELGIGFNLGYAELVV-------------EGGVKRRFNTSILVDKSGKIVGKYRK 126 (303)
T ss_dssp HHHTTSBS---SSSCTTTHHHHHHHHHHTCEEEEEEEEEEE-------------ETTEEEEEEEEEEECTTSCEEEEEEC
T ss_pred hhHHHHhh---cCCCHHHHHHHHHHHHhCeEEEEeeeEecC-------------CCCCcceeeEEEEECCCCCEeeeEee
Confidence 000000 013466899999999999999999988731 22 2799999999999999999999
Q ss_pred CCCCc--c----------CcccCCCCC-CceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCC---CCCC
Q psy10159 168 FNLFL--E----------YAFDTTPQP-EMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAW---MSEL 231 (492)
Q Consensus 168 ~~Lf~--e----------~~~~~~~g~-e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw---~~~~ 231 (492)
+||++ | +..++.+|+ ++.+|+++ |+|||++||||++|||+++.+++ +|+++|++|++| ....
T Consensus 127 ~hL~~~~e~~p~~~~~~~E~~~f~~G~~~~~v~~~~-~~~ig~~ICyD~~fpe~~r~l~~-~ga~ll~~~~~~~~~~~~~ 204 (303)
T 1uf5_A 127 IHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVD-AAKMGMFIANDRRWPEAWRVMGL-RGAEIICGGYNTPTHNPPV 204 (303)
T ss_dssp CCCCSCSSCCTTCSSCCCHHHHCCCCSSCSCEEEET-TEEEEECCGGGGGCHHHHHHHHH-TTCSEEEEEECCBSCCTTC
T ss_pred eecCCcccccccccccccchhhccCCCCCCceEecC-CceEEEEEecCccCHHHHHHHHH-CCCCEEEEecCCccccccc
Confidence 99973 2 333678898 89999999 56999999999999999999999 999999777653 2222
Q ss_pred ------hhhHHHHHHHHHhhhCCceEEEeCCcCC--CCcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 232 ------PLLTAVTVHSSWAFSMDVNLLSSNYNNP--AQYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 232 ------p~l~~~~~~~~~A~en~v~vlaan~~~~--~~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
...++..+.++||+||++++++||..|. ...+.|.|.+++|+|++++..+.+ ++++++++||+...
T Consensus 205 ~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p~G~vl~~~~~~-~~~~l~~~id~~~~ 278 (303)
T 1uf5_A 205 PQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTL-EDEVITAAVDLDRC 278 (303)
T ss_dssp GGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEETTEEECCCCEEECTTSCEEEECCSS-SSEEEEEEEEGGGG
T ss_pred cCCccccHHHHHHHHHhhhhcCCcEEEEECcccccCCccccceeEEECCCCCEeccCCCC-CCcEEEEEEcHHHH
Confidence 2223344678999999999999998875 245788999999999999998643 67999999998754
No 11
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=6.3e-37 Score=323.96 Aligned_cols=239 Identities=18% Similarity=0.203 Sum_probs=196.6
Q ss_pred CCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCC
Q psy10159 11 REFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTP 90 (492)
Q Consensus 11 ~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~ 90 (492)
.++++||++|+++. . +.+.|++++.+++++|+++|||||||||++++|+... +....+.+
T Consensus 12 ~~~~kVa~vQ~~~~---~---------d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~---~~~~~~a~----- 71 (440)
T 1ems_A 12 TGRHFIAVCQMTSD---N---------DLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNK---NEQIDLAM----- 71 (440)
T ss_dssp CSEEEEEEECBCCC---S---------CHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSH---HHHHHHHH-----
T ss_pred cCCceEEEEecCCC---C---------CHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcch---hHHHHhhc-----
Confidence 35799999999876 3 6889999999999999999999999999999876531 00000000
Q ss_pred CCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccc---cccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeec
Q psy10159 91 EDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFE---IVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRK 167 (492)
Q Consensus 91 ~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~e---k~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK 167 (492)
...++.++.|+++|++++++|++|+.. +. +++++|||+++|+++|+++++|||
T Consensus 72 ----------~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~~--------------~~~~~yNs~~~i~~~G~i~~~yrK 127 (440)
T 1ems_A 72 ----------ATDCEYMEKYRELARKHNIWLSLGGLHHKDPS--------------DAAHPWNTHLIIDSDGVTRAEYNK 127 (440)
T ss_dssp ----------HHHHHHHHHHHHHHHHTTCEEEEEEEEEEETT--------------EEEEEEEEEEEECTTSCEEEEEEC
T ss_pred ----------cCCCHHHHHHHHHHHHcCeEEEeccccccccC--------------CCCcEEEEEEEECCCCcEEEEEee
Confidence 123678999999999999999999654 31 335899999999999999999999
Q ss_pred CCCCcc---------CcccCCCCCCceE-EEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCChhhHHH
Q psy10159 168 FNLFLE---------YAFDTTPQPEMIT-FNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELPLLTAV 237 (492)
Q Consensus 168 ~~Lf~e---------~~~~~~~g~e~~v-f~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p~l~~~ 237 (492)
+|||++ +..++.+|++..+ |+|++ +|+|++||||++|||+++.+++ +|+++|++|++|.......++.
T Consensus 128 ~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~-~~iG~~ICyD~~fpe~~r~l~~-~Ga~il~~psa~~~~~~~~~~~ 205 (440)
T 1ems_A 128 LHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPI-GRLGLSICYDVRFPELSLWNRK-RGAQLLSFPSAFTLNTGLAHWE 205 (440)
T ss_dssp CCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETT-EEECCCCGGGGGCHHHHHHHHH-TTCSEEECCBCCCHHHHHHHHH
T ss_pred eeecCccCCCCCcccccccccCCCCCceeEECCC-eeEEEEEeccccChHHHHHHHH-cCCcEEEECCcCCCCCcHHHHH
Confidence 999863 2346788998888 99995 5999999999999999999999 9999999999986432233555
Q ss_pred HHHHHHhhhCCceEEEeCCcCCC---CcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 238 TVHSSWAFSMDVNLLSSNYNNPA---QYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 238 ~~~~~~A~en~v~vlaan~~~~~---~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
.+.++||+||+++|++||..|.. ..+.|.|++++|+|++++..+ .++++++++||++.
T Consensus 206 ~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~G~vla~~~--~~e~il~a~idl~~ 266 (440)
T 1ems_A 206 TLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCS--ERVDMCFAEIDLSY 266 (440)
T ss_dssp HHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTTSCEEEECC--SSSCEEEEEEEHHH
T ss_pred HHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCCCCeeccCC--CCCcEEEEEeCHHH
Confidence 67899999999999999998742 457789999999999999986 36899999999764
No 12
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=1.9e-35 Score=323.38 Aligned_cols=247 Identities=17% Similarity=0.110 Sum_probs=200.7
Q ss_pred CceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCC
Q psy10159 12 EFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPE 91 (492)
Q Consensus 12 ~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~ 91 (492)
.+++||++|+++. +. +.+.|+++++++|++|+++|||||||||++++||... +....+
T Consensus 3 ~~~rvA~~Q~~~~--~~---------d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~----------dl~~~~- 60 (590)
T 3n05_A 3 LQLRLALNQIDST--VG---------DIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVE----------DLALRS- 60 (590)
T ss_dssp EEEEEEEEECCCC--TT---------CHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCG----------GGGGCH-
T ss_pred CccEEEEEeCCCC--CC---------CHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChH----------HHhhCH-
Confidence 3699999999987 44 8999999999999999999999999999999999862 111000
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhC--C----cEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeee
Q psy10159 92 DHAIPYQEPHKYDKILTMLSKAAKDS--N----MYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKY 165 (492)
Q Consensus 92 ~~~~pc~~~~~~~~~l~~Ls~lAr~~--~----i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rY 165 (492)
....+..+.|.++|+++ + ++|++|++++.... +..... ..+++||++++|+ +|+++++|
T Consensus 61 ---------~~~~~~~~~l~~la~~~~~~~~~~i~ivvG~~~~~~~~----~~~~~~-~~~~lyNsa~vi~-~G~i~~~y 125 (590)
T 3n05_A 61 ---------SFVEASRTALRELAARLAEEGFGELPVLVGYLDRSESA----QPKYGQ-PAGAPRNAAAVLH-RGRVALTF 125 (590)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHTTCTTSCEEEEEEEECSSC----BTTTTB-CTTCEEEEEEEEE-TTEEEEEE
T ss_pred ---------HHHHHHHHHHHHHHHhhhhccCCceEEEEeeEEEEcCc----cccccc-ccCCeeEEEEEEe-CCEEEEEE
Confidence 12356788899999987 6 99999998874200 000000 1147999999999 99999999
Q ss_pred ecCCCCcc----CcccCCCCCCceEEEcCCCCeEEEEEeccCCC-hHHHHHHHHhCCCcEEEEeCCCCCCCh-hhHHHHH
Q psy10159 166 RKFNLFLE----YAFDTTPQPEMITFNTDFGVTFGTFTCFDILF-PQPAVQLVKQKNITDFVYTAAWMSELP-LLTAVTV 239 (492)
Q Consensus 166 rK~~Lf~e----~~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~F-pe~a~~L~~~~Gad~iv~ptaw~~~~p-~l~~~~~ 239 (492)
+|+||+.. +..++.+|+++.+|+++ |+|||+.||||+|| |++++.++. +||++|++|++|+.... ...+..+
T Consensus 126 ~K~~L~~~~~f~E~r~f~~G~~~~v~~~~-g~~iG~~IC~D~~f~pe~~~~la~-~Ga~ii~~psa~p~~~gk~~~~~~l 203 (590)
T 3n05_A 126 AKHHLPNYGVFDEFRYFVPGDTMPIVRLH-GVDIALAICEDLWQDGGRVPAARS-AGAGLLLSVNASPYERDKDDTRLEL 203 (590)
T ss_dssp ECCCCCSSSSCCHHHHCCCCCEEEEEEET-TEEEEEEEGGGGGSTTSHHHHHHH-TTCSEEEEEECCBCCCCSSCHHHHH
T ss_pred eCccCCCCCccCccccccCCCcceEEEEC-CEEEEEEeehhhccCChHHHHHHH-cCCCEEEEecCCccccCcHHHHHHH
Confidence 99999652 23478999999999999 67999999999999 999999999 99999999999875432 2345678
Q ss_pred HHHHhhhCCceEEEeCCcCC--CCcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCCC
Q psy10159 240 HSSWAFSMDVNLLSSNYNNP--AQYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKSS 298 (492)
Q Consensus 240 ~~~~A~en~v~vlaan~~~~--~~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~~ 298 (492)
.++||++|++++++||..|. ...+.|.|++++|+|+++++++.+ ++++++++||+...
T Consensus 204 ~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iidp~G~vla~~~~~-~e~~~~~didl~~~ 263 (590)
T 3n05_A 204 VRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDRDGEVVARAPQF-SEGCVVLDLDLPAA 263 (590)
T ss_dssp HHHHHHHHTSEEEEEECEEEETTEEEEBCCEEECTTSCEEEECCBT-SCEEEEEEEEECCC
T ss_pred HHHHHHHhCCEEEEEecccCCCCeEEeCcEEEECCCCcEEEEcCCC-CCcEEEEEEccccc
Confidence 89999999999999999764 345789999999999999998765 68999999997643
No 13
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=1.5e-34 Score=314.04 Aligned_cols=254 Identities=16% Similarity=0.137 Sum_probs=195.7
Q ss_pred CCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCC
Q psy10159 11 REFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTP 90 (492)
Q Consensus 11 ~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~ 90 (492)
.-++|||++|+++. .. |++.|+++++++|++|+++|||||||||++++||... +.+-.+
T Consensus 4 sMkmKIAlaQln~~--vG---------D~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~----------Dl~~~~ 62 (565)
T 4f4h_A 4 SMKTRIALAQLNVT--VG---------DFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPE----------DLLLRP 62 (565)
T ss_dssp --CEEEEEEECCCC--TT---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCG----------GGGGCH
T ss_pred CcceEEEEEECCCC--cc---------cHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChH----------HhhhCH
Confidence 34699999999987 44 8999999999999999999999999999999999862 111111
Q ss_pred CCCCCCCCCCCCchHHHHHHHH-HHHhCCcEEEEcccccccCCC--CCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeec
Q psy10159 91 EDHAIPYQEPHKYDKILTMLSK-AAKDSNMYVVVNLFEIVACPS--DDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRK 167 (492)
Q Consensus 91 ~~~~~pc~~~~~~~~~l~~Ls~-lAr~~~i~IV~g~~ek~~c~~--~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK 167 (492)
.. + ......++.|.. +++..++.|++|++++..-.. ......-.. .++++||+++|+. +|+++++|+|
T Consensus 63 ~~----~---~~~~~~l~~la~~~~~~~~i~ivvG~p~~~~~~~~~~~~~~~~~~-~~~~lyNsa~vi~-~G~i~~~y~K 133 (565)
T 4f4h_A 63 AF----Y---AASDAALAELAAQLKPFAGLAVLVGHPLRAPSADGNANRAIERGV-PPVDTYNAASLIV-GGEVAGTYRK 133 (565)
T ss_dssp HH----H---HHHHHHHHHHHHHHTTSTTCEEEEEEEEECC-----CCCCCCTTS-CCCSEEEEEEEEE-TTEEEEEEEC
T ss_pred HH----H---HHHHHHHHHHHHHhhhcCCcEEEEeeeeeecccccccccceeccc-CCCceEEEEEEEE-CCEEEEEEee
Confidence 00 0 011233444433 233368999999887643110 000000001 3457999999998 6999999999
Q ss_pred CCCCcc----CcccCCCCCCceEEEcCCCCeEEEEEeccCCChHHHHHHHHhCCCcEEEEeCCCCCCCh-hhHHHHHHHH
Q psy10159 168 FNLFLE----YAFDTTPQPEMITFNTDFGVTFGTFTCFDILFPQPAVQLVKQKNITDFVYTAAWMSELP-LLTAVTVHSS 242 (492)
Q Consensus 168 ~~Lf~e----~~~~~~~g~e~~vf~t~fGvk~G~~IC~Di~Fpe~a~~L~~~~Gad~iv~ptaw~~~~p-~l~~~~~~~~ 242 (492)
+||+.. +..++.+|..+.+|+++ |+|||+.||||+||||+++.++. .||++|++|++|+.... ...+..+.++
T Consensus 134 ~hLp~~~~f~E~r~f~~G~~~~v~~~~-g~~iGv~IC~Dlwfpe~~r~la~-~GA~ii~~psAs~~~~gk~~~r~~ll~a 211 (565)
T 4f4h_A 134 QDLPNTEVFDEKRYFATDAAPYVFELN-GVKFGVVICEDVWHASAAQLAKA-AGAQVLIVPNGSPYHMNKDAVRIDILRA 211 (565)
T ss_dssp CSCCCSTTCCGGGTCCCCCCCCEEEET-TEEEEECCGGGGGSSHHHHHHHH-TTCSEEEEEECCBCCTTHHHHHHHHHHH
T ss_pred eecCCCcccceeccccCCCcceeEEec-CcEEEEEEeehhcccchhHHHHh-CCCeeeecccccccccCcHHHHHHHHHH
Confidence 999652 23478999999999999 67999999999999999999999 99999999999876543 3445568899
Q ss_pred HhhhCCceEEEeCCcCC--CCcCCCccEEECCCCcEEEEcCCCCCCeEEEEEeeCCC
Q psy10159 243 WAFSMDVNLLSSNYNNP--AQYGGGSGIYAGRQGIKVAVMPQYTGSQLLISRVPKKS 297 (492)
Q Consensus 243 ~A~en~v~vlaan~~~~--~~~~~Gssi~~~~~G~v~~~~~~~~~~~llva~v~~~~ 297 (492)
||.+|+++++++|..|. ...+.|.|++++|+|+++++++.+ ++++++++++...
T Consensus 212 rA~e~~~~vvy~N~vG~~~~~~f~G~S~iidp~G~vla~~~~f-~e~~~~~d~d~~~ 267 (565)
T 4f4h_A 212 RIRETGLPMVYVNLVGGQDELVFDGGSFVLDGAGELVAKMPQF-EEGNAIVEFDGAR 267 (565)
T ss_dssp HHHHHCCCEEEEECEEEETTEEEEBCCEEECTTSCEEEECCBS-CCEEEEEEEETTE
T ss_pred HHHHhCCcEEEeeeecCCCCeEEECCcceecCCCcEEEEcccc-ccceEEEEecccc
Confidence 99999999999999874 356889999999999999999876 7899999998764
No 14
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.4e-34 Score=318.60 Aligned_cols=237 Identities=15% Similarity=0.106 Sum_probs=187.3
Q ss_pred CceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCC
Q psy10159 12 EFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPE 91 (492)
Q Consensus 12 ~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~ 91 (492)
.+++||++|+++. .. +.+.|+++++++|++|+++|||||||||++++||... +..-.+
T Consensus 4 ~~~rVA~~Q~~~~--~~---------d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~----------dl~~~~- 61 (634)
T 3ilv_A 4 STIRIGGAAVNQT--PI---------DWENNVKNILDAIEEAKNANVEILCLPELCITGYGCE----------DLFLTD- 61 (634)
T ss_dssp CEEEEEEEEECCC--TT---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCG----------GGGGSH-
T ss_pred CCeEEEEEeCCCC--CC---------CHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChH----------HHhhCh-
Confidence 3699999999987 44 8999999999999999999999999999999999862 111000
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhC-CcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecCCC
Q psy10159 92 DHAIPYQEPHKYDKILTMLSKAAKDS-NMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKFNL 170 (492)
Q Consensus 92 ~~~~pc~~~~~~~~~l~~Ls~lAr~~-~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~~L 170 (492)
....+..+.|+.+|+++ +++|++|++++ +++++||++++| ++|+++++|+|+||
T Consensus 62 ---------~~~~~~~~~l~~la~~~~~i~ivvG~p~~---------------~~~~lyNsa~vi-~~G~il~~y~K~hL 116 (634)
T 3ilv_A 62 ---------WVAETAIEYCFEIAASCTDITVSLGLPMR---------------IAGITYNCVCLV-ENGIVKGFSAKQFL 116 (634)
T ss_dssp ---------HHHHHHHHHHHHHHTTCTTSEEEEEEEEE---------------ETTEEEEEEEEE-ETTEEEEEEECSSC
T ss_pred ---------hhhHHHHHHHHHHHHhCCCCEEEEeeeEe---------------eCCCccEEEEEE-ECCeEEEEEcCEeC
Confidence 12357789999999996 99999999988 456899999999 79999999999999
Q ss_pred Ccc----CcccCCCCCCc----------------eEEEcCCCCeEEEEEeccCCChH-HHHHHHHhCCCcEEEEeCCCCC
Q psy10159 171 FLE----YAFDTTPQPEM----------------ITFNTDFGVTFGTFTCFDILFPQ-PAVQLVKQKNITDFVYTAAWMS 229 (492)
Q Consensus 171 f~e----~~~~~~~g~e~----------------~vf~t~fGvk~G~~IC~Di~Fpe-~a~~L~~~~Gad~iv~ptaw~~ 229 (492)
+.. +..++.+|.+. .+|+++ |+|||+.||||+|||+ +++.++. +||++|++|++|+.
T Consensus 117 ~~~~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g~~vf~~~-g~~iG~~IC~D~~fPe~~~r~la~-~GAdii~~psas~~ 194 (634)
T 3ilv_A 117 ANEGVHYETRWFTAWPRNHTTTFLYNDVKYPFGDVLYNVK-DARIGFEICEDAWRTDRVGIRHYE-KGATLVLNPSASHF 194 (634)
T ss_dssp CCSTTCCGGGTCCCCCTTCEEEEEETTEEEEEESCCEEET-TEEEEECCTTC----------CGG-GTCSEEEEEECCBC
T ss_pred CCCCCcChhhhcCCCCccccceecccCcccccCCeEEEEC-CEEEEEEEeccccCChHHHHHHHH-CCCcEEEEecCCcc
Confidence 742 23368888765 689999 6799999999999998 9999998 99999999999865
Q ss_pred CC-hhhHHHHHHHHHhhhCCceEEEeCCcCCC---CcCCCccEEECCCCcEEEEcCCCC--CCeEEEEEeeCCCC
Q psy10159 230 EL-PLLTAVTVHSSWAFSMDVNLLSSNYNNPA---QYGGGSGIYAGRQGIKVAVMPQYT--GSQLLISRVPKKSS 298 (492)
Q Consensus 230 ~~-p~l~~~~~~~~~A~en~v~vlaan~~~~~---~~~~Gssi~~~~~G~v~~~~~~~~--~~~llva~v~~~~~ 298 (492)
.. ....+..+.++||++|++++++||..|.. ..+.|+|++. |+|+++++.+.+. ++++++++||++..
T Consensus 195 ~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~ 268 (634)
T 3ilv_A 195 AFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSA 268 (634)
T ss_dssp CTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC---
T ss_pred ccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHh
Confidence 43 23355677889999999999999998743 5678999877 9999999987653 45899999999754
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=3e-32 Score=301.75 Aligned_cols=241 Identities=15% Similarity=0.128 Sum_probs=189.8
Q ss_pred CCCCceEEEEEeeeccCCcCccchhhHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCC
Q psy10159 9 SSREFYTAAVVEYTSRNIILPDREWAARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIP 88 (492)
Q Consensus 9 ~~~~~~~aAvvQ~~~~~~~~~~~~~~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp 88 (492)
...+.++||++|+++. +. +.+.|+++++++|++|+++|||||||||++++||... +...
T Consensus 8 ~~~g~~rVAl~Q~~~~--~~---------D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~----------dl~~ 66 (680)
T 3sdb_A 8 YQHGFVRVAACTHHTT--IG---------DPAANAASVLDMARACHDDGAALAVFPELTLSGYSIE----------DVLL 66 (680)
T ss_dssp GGGTEEEEEEEECCCC--TT---------CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGG----------GGGG
T ss_pred hhCCCeEEEEEcCCCC--CC---------CHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChH----------HHhh
Confidence 3456899999999987 44 8999999999999999999999999999999999762 1110
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEcccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeeeecC
Q psy10159 89 TPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVNLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKYRKF 168 (492)
Q Consensus 89 ~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rYrK~ 168 (492)
.+.. . ....+.++.|+++|++++++|++|++++ +++++||++++|+ +|+++++|+|+
T Consensus 67 ~~~~-----~--~~~~~~l~~l~~~a~~~~i~ivvG~p~~---------------~~~~lyNsa~vi~-~G~il~~y~K~ 123 (680)
T 3sdb_A 67 QDSL-----L--DAVEDALLDLVTESADLLPVLVVGAPLR---------------HRHRIYNTAVVIH-RGAVLGVVPKS 123 (680)
T ss_dssp CHHH-----H--HHHHHHHHHHHHHHTTCSSEEEEEEEEE---------------ETTEEEEEEEEEE-TTEEEEEEECS
T ss_pred CHHH-----H--HhhHHHHHHHHHHhhcCCcEEEEeceEE---------------eCCCceEEEEEEe-CCCEEEEEeee
Confidence 0000 0 1235789999999999999999999887 4468999999999 99999999999
Q ss_pred CCCcc----CcccCCCCCCc----------------eEE---EcCCCCeEEEEEeccCCChHHH-HHHHHhCCCcEEEEe
Q psy10159 169 NLFLE----YAFDTTPQPEM----------------ITF---NTDFGVTFGTFTCFDILFPQPA-VQLVKQKNITDFVYT 224 (492)
Q Consensus 169 ~Lf~e----~~~~~~~g~e~----------------~vf---~t~fGvk~G~~IC~Di~Fpe~a-~~L~~~~Gad~iv~p 224 (492)
||+.. +..++.+|.+. .+| +++ |+|||+.||||++||+++ +.++. +||++|++|
T Consensus 124 hL~~~~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~~~vf~~~~~~-g~riGv~IC~Dl~fPe~~~r~la~-~GAdiil~p 201 (680)
T 3sdb_A 124 YLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLP-GFVLHVEIAEDMFVPMPPSAEAAL-AGATVLANL 201 (680)
T ss_dssp CCCEETTEEGGGTEECCTTCCSEEEETTEEEEBSSCEEEEETTCT-TCEEEEEEGGGGGSSSCHHHHHHH-HTCCEEEEE
T ss_pred cCCCCCccChhhhcCCCCCCCceeeecCcccccCCceeEeeeccC-CeEEEEEEeccccccccHHHHHHh-cCCeEEEEe
Confidence 99752 23367777654 256 677 679999999999999996 88998 999999999
Q ss_pred CCCCCCChh-hHHHHHHHHHh-hhCCceEEEeCCcCC---CCcCCCccEEECCCCcEEEEcCCC-CCCeEEEEEeeCC
Q psy10159 225 AAWMSELPL-LTAVTVHSSWA-FSMDVNLLSSNYNNP---AQYGGGSGIYAGRQGIKVAVMPQY-TGSQLLISRVPKK 296 (492)
Q Consensus 225 taw~~~~p~-l~~~~~~~~~A-~en~v~vlaan~~~~---~~~~~Gssi~~~~~G~v~~~~~~~-~~~~llva~v~~~ 296 (492)
++|+..... ..+.++.+++| ..+..+|+++|..|. ...+.|.|+++ ++|+++++.+.+ .++++++++||++
T Consensus 202 Sasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~~~~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~ 278 (680)
T 3sdb_A 202 SGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTE 278 (680)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTSCCSSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHH
T ss_pred cCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCcccCCCCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHH
Confidence 999765432 23334555554 445677777776664 35688999999 899999998753 2689999999964
No 16
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=80.31 E-value=2.4 Score=41.01 Aligned_cols=45 Identities=16% Similarity=0.273 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhCCcEEEEc-ccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 106 ILTMLSKAAKDSNMYVVVN-LFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 106 ~l~~Ls~lAr~~~i~IV~g-~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
....++..|.+++++|+.- ..-.. ++..++=...+++|+|++++.
T Consensus 200 ~~~~~~arA~en~~~vv~~n~~G~~--------------~~~~~~G~S~ii~p~G~vl~~ 245 (281)
T 3p8k_A 200 WHSLLKARAIENNMFVIGTNSTGFD--------------GNTEYAGHSIVINPNGDLVGE 245 (281)
T ss_dssp HHHHHHHHHHHHTSEEEEEECEEEC--------------SSCEEECCCEEECTTSCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEccCcCC--------------CCcEEeeeEEEECCCCCEEEe
Confidence 3445667889999999863 22111 223344456789999999876
No 17
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=77.33 E-value=4 Score=40.71 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=44.5
Q ss_pred HHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEE-cccc
Q psy10159 49 IIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVV-NLFE 127 (492)
Q Consensus 49 ~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~-g~~e 127 (492)
..+.++.+||||||.|=. |.. .........++..|.+++++|+. |..-
T Consensus 174 ~~r~l~~~Gadlll~psa----~~~---------------------------~~~~~~~~l~~arA~En~~~vv~an~~G 222 (341)
T 2uxy_A 174 IWRDCAMKGAELIVRCQG----YMY---------------------------PAKDQQVMMAKAMAWANNCYVAVANAAG 222 (341)
T ss_dssp HHHHHHHTTCSEEEEEEC----CBT---------------------------TCHHHHHHHHHHHHHHHTCEEEEEECEE
T ss_pred HHHHHHHcCCCEEEEcCC----CCC---------------------------CcHHHHHHHHHHHHHhCCcEEEEECCCC
Confidence 445556689999998843 222 01123455667789999999887 3222
Q ss_pred cccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 128 IVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 128 k~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
.+ ++..++=...+++|+|+++++
T Consensus 223 ~~--------------~~~~~~G~S~Iidp~G~vla~ 245 (341)
T 2uxy_A 223 FD--------------GVYSYFGHSAIIGFDGRTLGE 245 (341)
T ss_dssp EC--------------SSCEEECCCEEECTTSCEEEE
T ss_pred CC--------------CCceeeeEEEEECCCCCEEEE
Confidence 21 222333356788999999875
No 18
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=75.98 E-value=5.2 Score=39.65 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=43.9
Q ss_pred HHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEEc-ccc
Q psy10159 49 IIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVVN-LFE 127 (492)
Q Consensus 49 ~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~g-~~e 127 (492)
+.+..+.+||||||.|=. |.. .........++..|.++++||+.- ..-
T Consensus 174 ~~r~~~~~Gadlil~psa----w~~---------------------------~~~~~~~~~~~arA~En~~~vv~an~~G 222 (334)
T 2dyu_A 174 LAREAAYKGCNVYIRISG----YST---------------------------QVNDQWILTNRSNAWHNLMYTVSVNLAG 222 (334)
T ss_dssp HHHHHHHTTCSEEEEEES----SCT---------------------------TSHHHHHHHHHHHHHHHTCEEEEEECSB
T ss_pred HHHHHHHcCCCEEEEeCC----CCC---------------------------CcHHHHHHHHHHHHHhCCCEEEEECCCc
Confidence 445555689999998843 322 011234556677889999998873 221
Q ss_pred cccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 128 IVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 128 k~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
.. ++..++=...+++|+|+++++
T Consensus 223 ~~--------------~~~~~~G~S~Iidp~G~vla~ 245 (334)
T 2dyu_A 223 YD--------------NVFYYFGEGQICNFDGTTLVQ 245 (334)
T ss_dssp SS--------------SSCCCCCEEEEECTTSCEEEE
T ss_pred CC--------------CCeeeeeEEEEECCCCCEeee
Confidence 10 222233456788999999875
No 19
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=72.33 E-value=4 Score=39.27 Aligned_cols=45 Identities=22% Similarity=0.373 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCcEEEEc--ccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 106 ILTMLSKAAKDSNMYVVVN--LFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 106 ~l~~Ls~lAr~~~i~IV~g--~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
....++..|.++++||+.. ..... ++...+=...+++|+|+++++
T Consensus 204 ~~~~~~~rA~en~~~vv~~n~~G~~~--------------~~~~~~G~S~ii~p~G~vl~~ 250 (291)
T 1f89_A 204 WHLLARSRAVDNQVYVMLCSPARNLQ--------------SSYHAYGHSIVVDPRGKIVAE 250 (291)
T ss_dssp HHHHHHHHHHHHTSEEEEECCCCCTT--------------SSSCBCCCCEEECTTSCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEecCccCCC--------------CCCeeeeEEEEECCCCCEEEe
Confidence 3455667888999999874 22110 222333356789999999875
No 20
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=71.24 E-value=4.7 Score=43.24 Aligned_cols=74 Identities=19% Similarity=0.261 Sum_probs=48.7
Q ss_pred HHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhCCcEEEE-cccc
Q psy10159 49 IIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDSNMYVVV-NLFE 127 (492)
Q Consensus 49 ~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~~i~IV~-g~~e 127 (492)
..+.++.+||+||+-|=.+ .+.. .........++..|++++++++. |..-
T Consensus 177 ~~r~la~~GA~ii~~psAs--~~~~---------------------------gk~~~r~~ll~arA~e~~~~vvy~N~vG 227 (565)
T 4f4h_A 177 AAQLAKAAGAQVLIVPNGS--PYHM---------------------------NKDAVRIDILRARIRETGLPMVYVNLVG 227 (565)
T ss_dssp HHHHHHHTTCSEEEEEECC--BCCT---------------------------THHHHHHHHHHHHHHHHCCCEEEEECEE
T ss_pred hhHHHHhCCCeeeeccccc--cccc---------------------------CcHHHHHHHHHHHHHHhCCcEEEeeeec
Confidence 3445566899999998542 1211 11233455677889999998876 5433
Q ss_pred cccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEeee
Q psy10159 128 IVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAKY 165 (492)
Q Consensus 128 k~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~rY 165 (492)
.+ ++..++-...+++|+|+++++-
T Consensus 228 ~~--------------~~~~f~G~S~iidp~G~vla~~ 251 (565)
T 4f4h_A 228 GQ--------------DELVFDGGSFVLDGAGELVAKM 251 (565)
T ss_dssp EE--------------TTEEEEBCCEEECTTSCEEEEC
T ss_pred CC--------------CCeEEECCcceecCCCcEEEEc
Confidence 32 4445667889999999998874
No 21
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=68.99 E-value=15 Score=35.30 Aligned_cols=68 Identities=12% Similarity=-0.032 Sum_probs=41.3
Q ss_pred HHHhCCCcEEEEeCCCCCCChhh------------HHHHHHHHHhhhCCceEEEeCCcCCC-CcCCCccEEECCCCcEEE
Q psy10159 212 LVKQKNITDFVYTAAWMSELPLL------------TAVTVHSSWAFSMDVNLLSSNYNNPA-QYGGGSGIYAGRQGIKVA 278 (492)
Q Consensus 212 L~~~~Gad~iv~ptaw~~~~p~l------------~~~~~~~~~A~en~v~vlaan~~~~~-~~~~Gssi~~~~~G~v~~ 278 (492)
.++ .|+|+||+|=.|....+.. ...+..+..|.+++++++.-...... ....=+.++++|+|+++.
T Consensus 49 A~~-~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~ 127 (283)
T 3hkx_A 49 ASE-QGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLA 127 (283)
T ss_dssp HHH-TTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCBCSSCTTTCCBEEEEECTTSCEEE
T ss_pred HHH-CCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEEEEcCCCCEEEEEEEEcCCCcEEE
Confidence 344 8999999998876544322 11233455688899988864321111 112236678889998775
Q ss_pred Ec
Q psy10159 279 VM 280 (492)
Q Consensus 279 ~~ 280 (492)
..
T Consensus 128 ~y 129 (283)
T 3hkx_A 128 SY 129 (283)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 22
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=67.59 E-value=6.2 Score=37.64 Aligned_cols=46 Identities=20% Similarity=0.178 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCcEEEEcccc-cccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 106 ILTMLSKAAKDSNMYVVVNLFE-IVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 106 ~l~~Ls~lAr~~~i~IV~g~~e-k~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
....++..|.++++||+..... ... .+...+=...+++|+|+++++
T Consensus 188 ~~~~~~~rA~en~~~vv~~n~~G~~~-------------~~~~~~G~S~ii~p~G~v~~~ 234 (276)
T 2w1v_A 188 WELLQRARAVDNQVYVATASPARDDK-------------ASYVAWGHSTVVDPWGQVLTK 234 (276)
T ss_dssp HHHHHHHHHHHHTCEEEEECCCCCTT-------------SSSCCCCCCEEECTTSCEEEE
T ss_pred HHHHHHHHHHHcCcEEEEecccccCC-------------CCceeeeEeEEECCCCCEeEE
Confidence 3445667788999999874211 100 111222345689999999875
No 23
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=58.93 E-value=22 Score=33.39 Aligned_cols=47 Identities=17% Similarity=0.092 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhCCcEEEEc-ccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 105 KILTMLSKAAKDSNMYVVVN-LFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 105 ~~l~~Ls~lAr~~~i~IV~g-~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
.....+...|.+++++|+.- ..-... ++...+=...+++|+|+++++
T Consensus 182 ~~~~~~~~rA~en~~~vv~an~~G~~~-------------~~~~~~G~S~ii~p~G~v~~~ 229 (266)
T 2e11_A 182 AWKTLLRARAIENLCFVAAVNRVGVDG-------------NQLHYAGDSAVIDFLGQPQVE 229 (266)
T ss_dssp HHHHHHHHHHHHTTSEEEEEECEEECT-------------TSCEEEEEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEEcCCcCCC-------------CCceEeeeEEEECCCCceeee
Confidence 34455677899999999874 322210 112333467789999999875
No 24
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=56.25 E-value=14 Score=39.60 Aligned_cols=45 Identities=20% Similarity=0.335 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCcEEEE-cccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 106 ILTMLSKAAKDSNMYVVV-NLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 106 ~l~~Ls~lAr~~~i~IV~-g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
....++..|.++++++|. |..-.+ ++..+.=...+++|+|+++++
T Consensus 200 ~~~l~~~rA~e~~~~vv~an~~G~~--------------~~~~f~G~S~iidp~G~vla~ 245 (590)
T 3n05_A 200 RLELVRKRAQEAGCTTAYLAMIGGQ--------------DELVFDGDSIVVDRDGEVVAR 245 (590)
T ss_dssp HHHHHHHHHHHHTSEEEEEECEEEE--------------TTEEEEBCCEEECTTSCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEEecccCC--------------CCeEEeCcEEEECCCCcEEEE
Confidence 355677889999999887 432221 222223356788999999876
No 25
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=55.02 E-value=11 Score=38.52 Aligned_cols=46 Identities=24% Similarity=0.345 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhCCcEEEEcc-cccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 106 ILTMLSKAAKDSNMYVVVNL-FEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 106 ~l~~Ls~lAr~~~i~IV~g~-~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
....++..|.++++||+.-. .-... ++...+=...+++|+|++++.
T Consensus 204 ~~~~~~arA~En~~~vv~an~~G~~~-------------~~~~~~G~S~ii~P~G~vla~ 250 (440)
T 1ems_A 204 WETLLRARAIENQCYVVAAAQTGAHN-------------PKRQSYGHSMVVDPWGAVVAQ 250 (440)
T ss_dssp HHHHHHHHHHHHTCEEEECBBEEEEE-------------TTEEEECCCEEECTTSCEEEE
T ss_pred HHHHHHHHHHhcCcEEEEecccccCC-------------CCceeeeeeEEECCCCCeecc
Confidence 34455677999999998842 11110 112223356789999999875
No 26
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=52.44 E-value=21 Score=34.23 Aligned_cols=42 Identities=7% Similarity=0.075 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCcEEEEc--ccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 108 TMLSKAAKDSNMYVVVN--LFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 108 ~~Ls~lAr~~~i~IV~g--~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
..++..|.++++||+.. .... ++...+=...+++|+|++++.
T Consensus 217 ~~~~~rA~en~~~vv~~n~~G~~---------------~~~~~~G~S~ii~p~G~vl~~ 260 (303)
T 1uf5_A 217 LSMQAGSYQNGAWSAAAGKAGME---------------ENCMLLGHSCIVAPTGEIVAL 260 (303)
T ss_dssp HHHHHHHHHHTCEEEEEEBCEEE---------------TTEEECCCCEEECTTSCEEEE
T ss_pred HHHHhhhhcCCcEEEEECccccc---------------CCccccceeEEECCCCCEecc
Confidence 34567888999999874 2221 222233346788999999875
No 27
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=51.73 E-value=14 Score=34.85 Aligned_cols=40 Identities=10% Similarity=0.049 Sum_probs=26.8
Q ss_pred hCCCcEEEEeCCCCCCChhh---------------HHHHHHHHHhhhCCceEEEe
Q psy10159 215 QKNITDFVYTAAWMSELPLL---------------TAVTVHSSWAFSMDVNLLSS 254 (492)
Q Consensus 215 ~~Gad~iv~ptaw~~~~p~l---------------~~~~~~~~~A~en~v~vlaa 254 (492)
+.|+|+||+|=.|....++. ...+..+..|.+++++++.-
T Consensus 32 ~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G 86 (262)
T 3ivz_A 32 KQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAG 86 (262)
T ss_dssp HTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEE
T ss_pred HCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEe
Confidence 38999999998876543321 12334456688889988764
No 28
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=38.41 E-value=43 Score=33.99 Aligned_cols=70 Identities=7% Similarity=0.050 Sum_probs=39.9
Q ss_pred HHHHHhCCCcEEEEeCCCCCCChh-----------------hHHHHHHHHHhhhCCceEEEeCCcC-C--CCcCCCccEE
Q psy10159 210 VQLVKQKNITDFVYTAAWMSELPL-----------------LTAVTVHSSWAFSMDVNLLSSNYNN-P--AQYGGGSGIY 269 (492)
Q Consensus 210 ~~L~~~~Gad~iv~ptaw~~~~p~-----------------l~~~~~~~~~A~en~v~vlaan~~~-~--~~~~~Gssi~ 269 (492)
++.+. .|+|+||+|=.|.....+ ....+..+..|.++++.++..-... + .....=+.++
T Consensus 106 ~~A~~-~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa~v 184 (405)
T 2vhh_A 106 KAAAE-AGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTAVV 184 (405)
T ss_dssp HHHHH-TTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEEEE
T ss_pred HHHHH-CCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEeceecccCCCCcEEEEEEE
Confidence 33344 899999999877533211 0112345567888999888632210 0 0011224567
Q ss_pred ECCCCcEEEEc
Q psy10159 270 AGRQGIKVAVM 280 (492)
Q Consensus 270 ~~~~G~v~~~~ 280 (492)
++++|.+++..
T Consensus 185 i~p~G~i~~~Y 195 (405)
T 2vhh_A 185 ISNSGRYLGKH 195 (405)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCeEEEEE
Confidence 78888876643
No 29
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=34.73 E-value=42 Score=36.26 Aligned_cols=46 Identities=13% Similarity=0.234 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCcEEEE-cccccccCCCCCCCCcccCCCCCeeEEEEEEEcCCCcEEee
Q psy10159 105 KILTMLSKAAKDSNMYVVV-NLFEIVACPSDDQSSICRGQDRNYHYNTNLVFDRQGQIIAK 164 (492)
Q Consensus 105 ~~l~~Ls~lAr~~~i~IV~-g~~ek~~c~~~~~~~~cp~~~~~~~yNT~vvf~~~G~ii~r 164 (492)
.....++..|.++++++|. |..-.+ .+...|.-.-++.|+|++++.
T Consensus 201 ~~~~l~~~rA~e~~~~vv~aN~~G~~--------------~~~~~f~G~S~I~p~G~vla~ 247 (634)
T 3ilv_A 201 IRYDLVIGGSERFDCTYVYANLLGNE--------------AGRMIYDGEVLIAHKGKLIQR 247 (634)
T ss_dssp HHHHHHHHHHHHTTSEEEEEECEEES--------------SSSCEEECCEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHhCCEEEEEcCccCC--------------CCceEEcceEEEEcCCeEEEE
Confidence 3345567788999999886 332221 123344332333489999886
No 30
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=33.73 E-value=44 Score=33.65 Aligned_cols=68 Identities=10% Similarity=0.018 Sum_probs=44.7
Q ss_pred hHHHhHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHH
Q psy10159 34 AARDLMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKA 113 (492)
Q Consensus 34 ~~~~~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~l 113 (492)
..++....|++.+.++++...+.|.-|+||||-+=+--.. .. .+..+.| -.....+-++.+
T Consensus 200 l~r~~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~-----~~---g~l~~~~-----------Fk~gs~~~~~~L 260 (367)
T 1iuq_A 200 LTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDP-----ST---GEWYPAP-----------FDASSVDNMRRL 260 (367)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCT-----TT---CCBCCCC-----------CCHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCC-----CC---Ccccccc-----------ccchhhhHHHHH
Confidence 3456788999999999988888788999999995431000 00 0111222 124567778889
Q ss_pred HHhCCcE
Q psy10159 114 AKDSNMY 120 (492)
Q Consensus 114 Ar~~~i~ 120 (492)
|.+.++.
T Consensus 261 A~ksg~P 267 (367)
T 1iuq_A 261 IQHSDVP 267 (367)
T ss_dssp HHTSSSC
T ss_pred HHHcCCC
Confidence 9988766
No 31
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=33.48 E-value=55 Score=30.66 Aligned_cols=67 Identities=9% Similarity=0.074 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhC
Q psy10159 38 LMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDS 117 (492)
Q Consensus 38 ~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~ 117 (492)
..++.++.+.+.|+.|+.-|++.||++ +|+... . ...|+....| ....+.+++|...|+++
T Consensus 98 ~r~~~~~~~~~~i~~a~~lGa~~v~~~----~g~~~~-~--------~~~p~~~~~~------~~~~~~l~~l~~~a~~~ 158 (287)
T 3kws_A 98 IRKECMDTMKEIIAAAGELGSTGVIIV----PAFNGQ-V--------PALPHTMETR------DFLCEQFNEMGTFAAQH 158 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEC----SCCTTC-C--------SBCCSSHHHH------HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEe----cCcCCc-C--------CCCCCHHHHH------HHHHHHHHHHHHHHHHc
Confidence 456778899999999999999988875 233210 0 0111110000 12346788888899999
Q ss_pred CcEEEE
Q psy10159 118 NMYVVV 123 (492)
Q Consensus 118 ~i~IV~ 123 (492)
|+.|.+
T Consensus 159 Gv~l~l 164 (287)
T 3kws_A 159 GTSVIF 164 (287)
T ss_dssp TCCEEE
T ss_pred CCEEEE
Confidence 998887
No 32
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=28.24 E-value=69 Score=30.66 Aligned_cols=61 Identities=16% Similarity=0.158 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhC
Q psy10159 38 LMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDS 117 (492)
Q Consensus 38 ~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~ 117 (492)
..+..++.+++.|+.|++-|++.||+|- . ....+. + .| ....+.+.++...|+++
T Consensus 108 ~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~---~~~~~~-------~-------~~------~~~~~~l~~l~~~a~~~ 162 (305)
T 3obe_A 108 NMPKFDEFWKKATDIHAELGVSCMVQPS--L---PRIENE-------D-------DA------KVVSEIFNRAGEITKKA 162 (305)
T ss_dssp GHHHHHHHHHHHHHHHHHHTCSEEEECC--C---CCCSSH-------H-------HH------HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEeCC--C---CCCCCH-------H-------HH------HHHHHHHHHHHHHHHHc
Confidence 3455678888899999999999999872 1 110000 0 00 12346788888999999
Q ss_pred CcEEEE
Q psy10159 118 NMYVVV 123 (492)
Q Consensus 118 ~i~IV~ 123 (492)
|+.|++
T Consensus 163 Gv~l~l 168 (305)
T 3obe_A 163 GILWGY 168 (305)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 999987
No 33
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=23.30 E-value=88 Score=29.30 Aligned_cols=64 Identities=14% Similarity=0.180 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhC
Q psy10159 38 LMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDS 117 (492)
Q Consensus 38 ~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~ 117 (492)
..++.++.+++.|+.|++-|++.|+++ |+... .. +.....| ....+.++++...|+++
T Consensus 102 ~r~~~~~~~~~~i~~A~~lG~~~v~~~-----~~~~~---------~~--~~~~~~~------~~~~~~l~~l~~~a~~~ 159 (295)
T 3cqj_A 102 VRAQGLEIMRKAIQFAQDVGIRVIQLA-----GYDVY---------YQ--EANNETR------RRFRDGLKESVEMASRA 159 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEC-----CCSCS---------SS--CCCHHHH------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEC-----CCCCC---------cC--cCHHHHH------HHHHHHHHHHHHHHHHh
Confidence 456778899999999999999999987 22110 00 0000000 12346678888899999
Q ss_pred CcEEEE
Q psy10159 118 NMYVVV 123 (492)
Q Consensus 118 ~i~IV~ 123 (492)
|+.|.+
T Consensus 160 Gv~l~l 165 (295)
T 3cqj_A 160 QVTLAM 165 (295)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 999888
No 34
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=21.76 E-value=88 Score=28.51 Aligned_cols=64 Identities=8% Similarity=-0.009 Sum_probs=41.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEcCCCCcCCCCCCCcccCcccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHhC
Q psy10159 38 LMESNAEQYVRIIQNASNYDVDIIVFPECGLAGTPVPKRRADVKPYLITIPTPEDHAIPYQEPHKYDKILTMLSKAAKDS 117 (492)
Q Consensus 38 ~~~~Nl~~~~~~i~~A~~~gadIIVfPE~~l~g~~~~~~r~~~~~~~~~vp~~~~~~~pc~~~~~~~~~l~~Ls~lAr~~ 117 (492)
..++.++.+++.++.|++-|++.|++. +|.... .. +....| ....+.++++...|+++
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~-----------~~-~~~~~~------~~~~~~l~~l~~~a~~~ 136 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVM----AGVVPA-----------GE-DAERYR------AVFIDNIRYAADRFAPH 136 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCT-----------TS-CHHHHH------HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCC-----------CC-CHHHHH------HHHHHHHHHHHHHHHHc
Confidence 456778889999999999999999873 233210 00 000000 12346678888889999
Q ss_pred CcEEEE
Q psy10159 118 NMYVVV 123 (492)
Q Consensus 118 ~i~IV~ 123 (492)
|+.|.+
T Consensus 137 gv~l~~ 142 (260)
T 1k77_A 137 GKRILV 142 (260)
T ss_dssp TCEEEE
T ss_pred CCEEEE
Confidence 998877
Done!