BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1016
(718 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189239340|ref|XP_973739.2| PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum]
Length = 867
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/533 (69%), Positives = 422/533 (79%), Gaps = 45/533 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIVHC+E K +VNG ++P +S++PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKAVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAP++EDEMMVAIFECIDR+F IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KET EKI E+ RIR +LL G LP EK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 AAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+GIKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQHCLCGADADLIML
Sbjct: 181 ERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ RPCD+CGQ+GHEMK+C+G A ++ F +E ++IF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPRPCDICGQLGHEMKDCIGGAASAESDTQKVF-AETDYIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VL+EYLE+EL MPNLPF Y FER LDDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKTQEQL----------------------------RQEE------------- 379
+ LYK VYKT L RQ++
Sbjct: 360 IRLYKDCVYKTGGWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKAREKSMLT 419
Query: 380 --NGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
+ RG KR + D+ S++++++DEVRLWEDGFKDRYYESKFDV D++ FR V
Sbjct: 420 PVDSQSSNRGQKRHH-EDDDESDDDQAHDEVRLWEDGFKDRYYESKFDVNSDNLDFRNNV 478
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GLCWVL+YYYQGC SWKWY+P+HYAPFASDF++IA + T FE + P
Sbjct: 479 ALHYVRGLCWVLRYYYQGCASWKWYYPYHYAPFASDFVHIAGLSTEFEEDSDP 531
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPEDFKIDLNGKKFAWQGVALLPFV+E+RL KALAPYY++LS EE
Sbjct: 562 ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEE 613
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNK 634
G+LT+SGDV LERVQLIM +LG EDEIFK RQQ E FK R K
Sbjct: 372 GWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKAREK 415
>gi|198471914|ref|XP_001355769.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
gi|198139522|gb|EAL32828.2| GA10268 [Drosophila pseudoobscura pseudoobscura]
Length = 916
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/567 (65%), Positives = 416/567 (73%), Gaps = 75/567 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKY SVI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYASVIIDCNENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIF+CIDRLF IVRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ARIRE+LL GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYY+
Sbjct: 121 RAAKETTEKRMEIARIREELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDR NN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C Q GHEM +CVGL A N + + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNQFGHEMDKCVGLSAVGSSGANFKPDVAIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF Y FER LDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYDFERTLDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQ------------------------------------------E 373
AVDRLV LYKK VYKT+ E
Sbjct: 361 AVDRLVELYKKCVYKTKGYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREQQFKARE 420
Query: 374 QLRQEENG-------------GGGGRGVKRSFDDVDESSE---------EEESNDE---- 407
+ RQ ++ GGG G S + + + E++ DE
Sbjct: 421 KQRQRQDHSALDQSVFGPTAVGGGRNGQPSSIANYKQEAAALRTGQKRPNEDTKDEEEDN 480
Query: 408 --VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
VRLWEDGFK RYYESKFDV ++ +FR V +YV GLCWVLKYYYQGC SW WYFP+
Sbjct: 481 DEVRLWEDGFKSRYYESKFDVAPENHSFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPY 540
Query: 466 HYAPFASDFINIAEVDTNFETGTQPVN 492
HYAPFASDF+NI + T FE GT+P N
Sbjct: 541 HYAPFASDFVNIQGLSTAFEKGTKPFN 567
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQF-APQDSPIIDFYPED 675
F Q T F+ K E+ M + AA S+ P P + + DSPIIDFYPED
Sbjct: 549 FVNIQGLSTAFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAELMSSPDSPIIDFYPED 606
Query: 676 FKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
FKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY +L+ E
Sbjct: 607 FKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYTQLTGAE 647
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R K ++R++ QS
Sbjct: 378 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREQQFKAREKQRQRQDHS--ALDQSV 435
Query: 651 KAPSFIPGGQFAPQDSPIIDFYPE 674
P+ + GG+ Q S I ++ E
Sbjct: 436 FGPTAVGGGRNG-QPSSIANYKQE 458
>gi|321474178|gb|EFX85144.1| hypothetical protein DAPPUDRAFT_194028 [Daphnia pulex]
Length = 827
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/582 (62%), Positives = 412/582 (70%), Gaps = 92/582 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWL+ KYPSVI C+E+K + +G+ +P D SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLTVKYPSVICDCIEEKVRHGPDGKALPVDVSKPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPED+PAP++EDEMMVAIFECIDR+F IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDRPAPRNEDEMMVAIFECIDRMFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RASKE AEK+ +A +RE L+A G +P EK KG HFDSNCITPGTPFM RLSACLHYY+
Sbjct: 121 RASKEIAEKVMTIATVRESLMARGAYVPSEKSKGEHFDSNCITPGTPFMHRLSACLHYYV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRL NDPGWK + VILSDANVPGEGEHKIMDYIR+QRAQP HDPNT+H LCGADADLIM
Sbjct: 181 HDRLRNDPGWKNVSVILSDANVPGEGEHKIMDYIRRQRAQPSHDPNTRHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP---NPESVITFGSEV 296
LGLATHEPNFTIIREEFKPN+ RPC++C Q+GH++ +C G + N E +E
Sbjct: 241 LGLATHEPNFTIIREEFKPNKPRPCEICNQIGHDLNDCQGAERTKYGENDEIGPNIAAEQ 300
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+IFVRL VLREYLE+EL MPNLPF Y ERA+DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 301 NYIFVRLYVLREYLERELRMPNLPFEYDLERAIDDWVFMCFFVGNDFLPHLPSLEIREGA 360
Query: 357 VDRLVNLYKKTVYKTQ------------------EQL----------RQEEN-------- 380
+DRLVNLYK VYKT+ QL RQE+
Sbjct: 361 IDRLVNLYKDCVYKTKGWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQEDELSFRKRMR 420
Query: 381 ------GGGGG-------------RGVKRSFDDVDESSEEEE------------------ 403
GGGGG R V R F + ++ +E
Sbjct: 421 NKNKRFGGGGGSRPAHLPQGQFAPRAVGRGFSNPSITNAHQEILQGRQQAQNTEAAIKLK 480
Query: 404 ---------------SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWV 448
S+DEVRLWEDGFK+RYYESKF VP D FR V EYV GLCWV
Sbjct: 481 AMLRSAVNDDDEDDFSHDEVRLWEDGFKERYYESKFAVPPTDEEFRSKVALEYVRGLCWV 540
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
L+YYYQG SWKW+FP+HYAPFASDF++I+ V T F+ GT+P
Sbjct: 541 LQYYYQGVPSWKWFFPYHYAPFASDFLDISSVITVFKKGTKP 582
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Query: 627 TMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQF-APQDSPIIDFYPEDFKIDLNGKKF 685
T+FK K + E+ M + ++++ P G+ +SPIIDFYPEDFKIDLNGKKF
Sbjct: 574 TVFKKGTKPFRPLEQLMGVFPAASRSHVPQPWGELMVDPESPIIDFYPEDFKIDLNGKKF 633
Query: 686 AWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
AWQGVALLPFVDE+RL KA+ +++L+ +E
Sbjct: 634 AWQGVALLPFVDEKRLKKAVKSLFDELTEDE 664
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++TDSG V LERVQ+I+ LG EDEIF+KRQ+ E F+ R + K +R
Sbjct: 377 GWVTDSGFVNLERVQIILSQLGHAEDEIFRKRQEDELSFRKRMRNKNKR-----FGGGGG 431
Query: 651 KAPSFIPGGQFAPQ 664
P+ +P GQFAP+
Sbjct: 432 SRPAHLPQGQFAPR 445
>gi|328697664|ref|XP_003240404.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Acyrthosiphon pisum]
Length = 958
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/372 (83%), Positives = 343/372 (92%), Gaps = 1/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+RKYPSVIV+C+E K +VNG++IP DS+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVNCIEQKSTDVNGEQIPIDSTSPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE+KPAPKDEDEMMVAIFECIDRLFRIVRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPENKPAPKDEDEMMVAIFECIDRLFRIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EK E+AR+R+ L+ G ILPPEK+KG HFDSNCITPGTPFM +LSACLHYY+H
Sbjct: 121 ASKETTEKTEELARVRKNLIEAGAILPPEKQKGEHFDSNCITPGTPFMDKLSACLHYYVH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWKGIKVILSDANVPGEGEHKIMD++RKQRAQP+HDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDFVRKQRAQPNHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP-NPESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPNQ +PCD+CGQMGHE+K+C GL+ E N S I F ++V+FI
Sbjct: 241 GLATHEPNFTIIREEFKPNQPKPCDMCGQMGHEIKDCQGLEREAFNDGSTIEFSADVQFI 300
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLE+EL MPNLPF Y FERALDDWVFMCFFVGNDFLPHLPSLEIRE A+DR
Sbjct: 301 FVRLNVLREYLERELEMPNLPFKYEFERALDDWVFMCFFVGNDFLPHLPSLEIRENAIDR 360
Query: 360 LVNLYKKTVYKT 371
LV+LYKKTVYKT
Sbjct: 361 LVSLYKKTVYKT 372
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 93/121 (76%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKD 429
+T +++R++ G +GVKR DD + S EE+E+ DEVRLWEDGFK+RYYESKFDV +
Sbjct: 459 QTVDEMRRQSVGNENNQGVKRKRDDNESSDEEKETPDEVRLWEDGFKERYYESKFDVDRT 518
Query: 430 DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQ 489
+ FR V EYV GLCWVL+YYYQGC SWKWYFP+HYAPFASDF+NI+ V T FE GT
Sbjct: 519 NSGFRHQVALEYVRGLCWVLQYYYQGCPSWKWYFPYHYAPFASDFLNISAVSTKFEKGTV 578
Query: 490 P 490
P
Sbjct: 579 P 579
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/73 (71%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLT SGDV L+RVQLIM DLGM EDEIFKKRQQTE MF RNK+KKRRE+Q K+ +S
Sbjct: 374 GFLTASGDVNLDRVQLIMSDLGMAEDEIFKKRQQTEKMFADRNKLKKRREKQDKL-MRSK 432
Query: 651 KAPSFIPGGQFAP 663
AP+F+ GGQ+AP
Sbjct: 433 SAPNFVLGGQYAP 445
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 47/52 (90%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DFKIDLNGKKFAWQGVALLPFV+E RLHKAL PYY+ L+ EE
Sbjct: 610 ESPIIDFYPVDFKIDLNGKKFAWQGVALLPFVEEARLHKALEPYYDLLTSEE 661
>gi|268533146|ref|XP_002631701.1| C. briggsae CBR-XRN-2 protein [Caenorhabditis briggsae]
Length = 901
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/536 (60%), Positives = 389/536 (72%), Gaps = 44/536 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL++KYP+ +V+ ED+ + V+G+++P D ++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAPK+EDEM IFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEK--EKGSHFDSNCITPGTPFMARLSACLHYY 178
ASKE AEK A + R +L+A+G +P +K E+ +HFDSNCITPGTPFMARL+ L YY
Sbjct: 121 ASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYY 180
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHDR+ NDP W I++ILSDANVPGEGEHKIMDYIRKQR P HDPNT HCLCGADADLI
Sbjct: 181 IHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLI 240
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL--DAEPNPESVITFGSEV 296
MLG+ATHE NF IIREEF PNQ R C++CGQ GHE+KEC G D + E E
Sbjct: 241 MLGIATHEANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDEYCKPEQREK 300
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
FIF+R+ VLREYLEKE+AMPNLPF ++ ERALDDWVF+CFFVGNDFLPHLPSLEIREGA
Sbjct: 301 NFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEIREGA 360
Query: 357 VDRLVNLYKKTVY----------------------------------KTQEQLRQEENGG 382
+DRL+ LYK+ VY + Q++ R +EN
Sbjct: 361 IDRLIKLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFKENQK 420
Query: 383 GGGR-----GVKRSFDD-VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
G KR + + + E+EE D++RL+E G+K+RYY +KFDV DD+ FR
Sbjct: 421 NKKARMQQYGRKRKAEQPIIITDEDEEPKDDIRLYESGWKERYYRAKFDVGSDDVDFRHR 480
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
V YV GLCWVL+YYYQGC SW WYFP+HYAPFASDF + E +F T+P N
Sbjct: 481 VAWAYVEGLCWVLRYYYQGCSSWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFN 536
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIID YP DF+IDLNGKK+AWQGVALLPFVDE+RL + L Y L+ EE
Sbjct: 565 ESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEE 616
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G+LT G +L+RV++IM+ LG +EDEIFK+RQQ E FK K KK R
Sbjct: 366 KLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFKENQKNKKAR 425
Query: 640 ERQ 642
+Q
Sbjct: 426 MQQ 428
>gi|357615796|gb|EHJ69836.1| hypothetical protein KGM_03375 [Danaus plexippus]
Length = 699
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/373 (84%), Positives = 336/373 (90%), Gaps = 1/373 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV CVE +P +V+GQ I DSS PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQRPTDVDGQLIYADSSLPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKP PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E+ARIR +L G LPPE+ K +HFDSNCITPGTPFM RLS CLHYYIH
Sbjct: 121 ASKETQEKIDEIARIRNELQVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWKG+KVILSDANVPGEGEHKIMDYIR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN-PESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ RPCDVCGQ+GHEMKEC G + + S +FG++ FI
Sbjct: 241 GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASLVRSDPSFGNQDSFI 300
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLEKEL+MPNLPF Y FERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR
Sbjct: 301 FVRLTVLREYLEKELSMPNLPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 360
Query: 360 LVNLYKKTVYKTQ 372
LVNLYKK VYKT+
Sbjct: 361 LVNLYKKCVYKTR 373
Score = 152 bits (383), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 66/105 (62%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
RG KRS + ++++++DEVRLWE+GFK+RYYESKF+V +D++ FR V +YV GL
Sbjct: 472 RGQKRSAEQA--GLDDDDAHDEVRLWEEGFKERYYESKFEVARDNLEFRYRVALQYVRGL 529
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWVL+YYYQGC SWKWYFP+HYAPFASDF+NI + T FE GTQP
Sbjct: 530 CWVLRYYYQGCASWKWYFPYHYAPFASDFVNIQGLSTKFERGTQP 574
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP DFKIDLNGKKFAWQGVALLPFVDE RL KAL PYY+ L+ ES+
Sbjct: 606 SPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYDDLTQAESQ 658
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 46/63 (73%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++TDSGDV L+RVQ+IM +LG +EDEIF++R Q E FK R K KK+++ ++ ++
Sbjct: 374 GWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNELSFKAREKNKKQQKINFELLEKTQ 433
Query: 651 KAP 653
AP
Sbjct: 434 FAP 436
>gi|383854346|ref|XP_003702682.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Megachile rotundata]
Length = 944
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/372 (83%), Positives = 333/372 (89%), Gaps = 3/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E KP NG ++P +S+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGVRVPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 ASKETNEKINEIQRIRSELTLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN-PESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G +EPN E FGSE +FI
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTG--SEPNQKEEDNAFGSECQFI 298
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLE+EL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+DR
Sbjct: 299 FVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 358
Query: 360 LVNLYKKTVYKT 371
LVNLYKKTVYKT
Sbjct: 359 LVNLYKKTVYKT 370
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 70/105 (66%), Positives = 87/105 (82%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
+G KR D+V+++S++++++DEVRLWE GFKDRYYESKFDV D++AFR V +YV GL
Sbjct: 492 QGKKRKIDEVEDNSDDDQAHDEVRLWEAGFKDRYYESKFDVSPDNLAFRNNVALQYVRGL 551
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWVL+YYYQGC SWKWYFP+HYAPFASDFINI + T FE GT P
Sbjct: 552 CWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTVP 596
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 47/53 (88%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY+ L+ E +
Sbjct: 628 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAEKK 680
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG +EDEIFKKRQQ E FK R K KKRR +
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQREKDKKRR-----LLGIGN 426
Query: 651 KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKF 685
P +IP GQFAP Q P+ + E +++ + G+ +
Sbjct: 427 NKPKWIPTGQFAPTALGGQIKPVENARYEAYQMRVLGRNY 466
>gi|380025877|ref|XP_003696690.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis florea]
Length = 948
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/372 (82%), Positives = 335/372 (90%), Gaps = 3/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E KP NG ++P +S++PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAP++EDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE +EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 ASKEASEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP-ESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G AEPN E TFGSE ++I
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTG--AEPNQREEANTFGSECQYI 298
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLE+EL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+DR
Sbjct: 299 FVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 358
Query: 360 LVNLYKKTVYKT 371
LVNLYKKTVYKT
Sbjct: 359 LVNLYKKTVYKT 370
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 70/84 (83%)
Query: 407 EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
EVRLWEDGFKDRYYESKFDV D++AFR V +YV GLCWVL+YYYQGC SWKWYFP+H
Sbjct: 511 EVRLWEDGFKDRYYESKFDVSPDNLAFRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYH 570
Query: 467 YAPFASDFINIAEVDTNFETGTQP 490
YAPFASDFINI + T FE GT P
Sbjct: 571 YAPFASDFINIGGLSTEFEKGTIP 594
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY+ L+ E
Sbjct: 626 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAE 676
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG +EDEIFKKRQQ E +K R K KKRR + S
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAYKQREKDKKRR-----LLGISN 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
P +IP GQFAP P+ + E +++ ++G+ +
Sbjct: 427 NKPKWIPTGQFAPMRIGEHIKPVQNARYEAYQMRVHGQNY 466
>gi|328788352|ref|XP_392371.3| PREDICTED: 5'-3' exoribonuclease 2 homolog [Apis mellifera]
Length = 948
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/372 (82%), Positives = 333/372 (89%), Gaps = 3/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E KP NG ++P +S++PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPITTNGIRVPVNSAEPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAP++EDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPQNEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 ASKEANEKINEIKRIRSELSLKGASLPPEKPKEEHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP-ESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G AEPN E FGSE ++I
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTG--AEPNQREEANPFGSECQYI 298
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLE+EL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+DR
Sbjct: 299 FVRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 358
Query: 360 LVNLYKKTVYKT 371
LVNLYKKTVYKT
Sbjct: 359 LVNLYKKTVYKT 370
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 73/88 (82%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
+S+DEVRLWEDGFKDRYYESKFDV D++ FR V +YV GLCWVL+YYYQGC SWKWY
Sbjct: 507 QSHDEVRLWEDGFKDRYYESKFDVSPDNLVFRNNVALQYVRGLCWVLRYYYQGCASWKWY 566
Query: 463 FPFHYAPFASDFINIAEVDTNFETGTQP 490
FP+HYAPFASDFINI + T FE GT P
Sbjct: 567 FPYHYAPFASDFINIGGLSTEFEKGTIP 594
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY+ L+ E
Sbjct: 626 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALEPYYDCLTEAE 676
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG +EDEIFKKRQQ E +K R K KKRR + S
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAYKQREKDKKRR-----LLGISN 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
P +IP GQFAP P+ + E +++ ++G+ +
Sbjct: 427 NKPKWIPTGQFAPTRIGEHIKPVQNARYEAYQMRIHGQNY 466
>gi|340714666|ref|XP_003395847.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus terrestris]
Length = 946
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/371 (81%), Positives = 332/371 (89%), Gaps = 1/371 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV C+E KP NG ++P +S PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPITTNGVRVPVNSVDPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+E+EMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EK+ E+ RIR +L+ G LPPEK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 ASKETIEKVNEIKRIRSELILKGVSLPPEKPKEDHFDSNCITPGTPFMARLSKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IRKQRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM++C G +A E+ TFGSE ++IF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQDCTGAEANQGDET-DTFGSECQYIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VLREYLE+EL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKT 371
VNLYKK VYKT
Sbjct: 360 VNLYKKAVYKT 370
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 83/103 (80%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCW 447
KR + V++ S++++ +DEVRLWEDGFKDRYYESKFDV D++AFR V +YV GLCW
Sbjct: 491 TKRRREPVEDDSDDDQVHDEVRLWEDGFKDRYYESKFDVSPDNLAFRNNVALQYVRGLCW 550
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
VL+YYYQGC SWKWYFP+HYAPFASDFINI + T FE GT P
Sbjct: 551 VLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTP 593
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYPEDFKIDLNGKKFAWQG+ALLPFVDE+RL KAL PYY+ L+ E +
Sbjct: 625 SPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKK 677
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG +EDEIFK+RQQ E +K R K KK+ + S
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGEVEDEIFKRRQQNELAYKQREKDKKKL-----LLGISN 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
K P +IP GQFAP SP+ + E +++ + G+ +
Sbjct: 427 KKPKWIPMGQFAPTRIGEHVSPVQNARYEAYEMRVRGQNY 466
>gi|350410980|ref|XP_003489200.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Bombus impatiens]
Length = 947
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/371 (81%), Positives = 331/371 (89%), Gaps = 1/371 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV C+E KP NG ++P +S+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVECIEQKPITTNGVRVPVNSADPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+E+EMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEEEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE +EK+ E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 ASKEASEKVNEIKRIRSELTLKGASLPPEKPKEDHFDSNCITPGTPFMARLSQCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IRKQRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G + E+ TFGSE ++IF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMQECTGAEVNQGDETN-TFGSECQYIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VLREYLE+EL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLREYLERELQMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKT 371
VNLYKK VYKT
Sbjct: 360 VNLYKKAVYKT 370
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 83/103 (80%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCW 447
+KR + ++ S++++ +DEVRLWEDGFKDRYYESKFDV D++AFR V +YV GLCW
Sbjct: 492 MKRKRESAEDDSDDDQVHDEVRLWEDGFKDRYYESKFDVSPDNLAFRNNVALQYVRGLCW 551
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
VL+YYYQGC SWKWYFP+HYAPFASDFINI + T FE GT P
Sbjct: 552 VLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFEKGTTP 594
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYPEDFKIDLNGKKFAWQG+ALLPFVDE+RL KAL PYY+ L+ E +
Sbjct: 626 SPIIDFYPEDFKIDLNGKKFAWQGIALLPFVDEKRLFKALEPYYDCLTEAEKK 678
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 10/104 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG +EDEIFKKRQQ E FK R K KK+ + + +
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGDVEDEIFKKRQQNELAFKQREKDKKK----LSLGIGNN 427
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKFAWQG 689
K P +IP GQFAP SP+ + E +++ + G+ + G
Sbjct: 428 K-PKWIPTGQFAPTRIGEHVSPVQNARYEAYQMRVCGQNYHTSG 470
>gi|307204797|gb|EFN83355.1| 5'-3' exoribonuclease 2-like protein [Harpegnathos saltator]
Length = 880
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/372 (82%), Positives = 334/372 (89%), Gaps = 3/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E KP +G IP +S+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPVNADGVCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E+ RIR +L G LPPEK K +HFDSNCITPGTPFM+RLSACLHYYIH
Sbjct: 121 ASKETTEKIDEIQRIRTELSLKGASLPPEKPKEAHFDSNCITPGTPFMSRLSACLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+ IK+ILSDANVPGEGEHKIMD+IR+QR+QPDHDPNTQH LCGADADLIML
Sbjct: 181 ERLNNDPGWRNIKIILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN-PESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM++C G AEPN E +GSE +FI
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMRDCTG--AEPNQKEEENAYGSECQFI 298
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VLREYLE+EL+MPNLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+DR
Sbjct: 299 FVRLNVLREYLERELSMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 358
Query: 360 LVNLYKKTVYKT 371
LV LYKK VYKT
Sbjct: 359 LVTLYKKAVYKT 370
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
Query: 365 KKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF 424
K + + LR E +G KR + VD S++E+++DEVRLWEDGFKDRYYESKF
Sbjct: 474 KNANHALESMLRPENTSN---KGQKRKIESVDPESDDEQAHDEVRLWEDGFKDRYYESKF 530
Query: 425 DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
V D++AFR V +YV GLCWVL+YYYQGC SW+WYFP+HYAPFASDFINI + T F
Sbjct: 531 GVSPDNLAFRNNVALQYVQGLCWVLRYYYQGCASWRWYFPYHYAPFASDFINIGGLSTEF 590
Query: 485 ETGTQP 490
E GT P
Sbjct: 591 EKGTIP 596
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 46/53 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S IIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KALA YY+ L+ E +
Sbjct: 628 SSIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEQRLFKALASYYDSLTEAEKK 680
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM DLG +EDEIFKKRQ+ E FK R K KKRR + S
Sbjct: 372 GFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKRQENELAFKQREKDKKRRHEII-----SN 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
P +IP GQFAP PI + E +++ + G+ +
Sbjct: 427 FKPKWIPAGQFAPTALGQAVKPIENARYEAYQMRVQGRNY 466
>gi|322801233|gb|EFZ21920.1| hypothetical protein SINV_00544 [Solenopsis invicta]
Length = 809
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/380 (81%), Positives = 334/380 (87%), Gaps = 1/380 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E KP +G IP +S+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKPISADGTCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E+ RIR +L G LPPEK K +HFDSNCITPGTPFMARLSACLHYYIH
Sbjct: 121 ASKETMEKIDEIERIRSELTLKGASLPPEKPKEAHFDSNCITPGTPFMARLSACLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+ I+VILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 ERLNNDPGWRNIQVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM++C G + PE TFGSE FIF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMRDCTGAEPNQRPEEN-TFGSECLFIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VLREYLE+EL MPNLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKTQEQLRQEEN 380
V LYKK VYKT L E+
Sbjct: 360 VALYKKAVYKTGVHLGDVED 379
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 384 GGRGVKRSFDDVDE-SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYV 442
G RG KR D+ + +S++++++DEVRLWEDGFKDRYYESKFDV D+ AFR V +YV
Sbjct: 474 GNRGQKRKHDECKQDNSDDDQAHDEVRLWEDGFKDRYYESKFDVSPDNFAFRNNVALQYV 533
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GLCWVL+YYYQGC SW+WYFP+HYAPFASDFINI + T FE T P
Sbjct: 534 RGLCWVLRYYYQGCASWRWYFPYHYAPFASDFINIGGLSTEFEKNTVP 581
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 47/53 (88%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S IIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KALAPYY+ L+ E +
Sbjct: 613 SQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAEKK 665
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 611 LGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAP------- 663
LG +EDEIFKKRQQ E F+ R K KK+R + S P++IP GQFAP
Sbjct: 374 LGDVEDEIFKKRQQNELAFRQREKDKKKRNEII-----SNFKPTWIPAGQFAPNALGQGI 428
Query: 664 QDSPIIDFYPEDFKIDLNGKKF 685
+ I D E FK+ + G+ +
Sbjct: 429 KPKTIEDARHEAFKMRVMGRNY 450
>gi|332021133|gb|EGI61520.1| 5'-3' exoribonuclease 2-like protein [Acromyrmex echinatior]
Length = 867
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/371 (81%), Positives = 331/371 (89%), Gaps = 1/371 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E K +G IP +S++PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKVVSADGVCIPVNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE+ EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLS+CLHYYIH
Sbjct: 121 AAKESTEKINEIERIRSELTLKGASLPPEKSKEEHFDSNCITPGTPFMARLSSCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ IKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DRLNNDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G + PE T+GSE +FIF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMRECTGAEPNQKPEEN-TYGSECQFIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VLREYLE+EL MPNLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLREYLERELHMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKT 371
V LYK+ VYKT
Sbjct: 360 VALYKRAVYKT 370
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%), Gaps = 4/120 (3%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEE--ESNDEVRLWEDGFKDRYYESKFDVPKDD 430
E + + EN G +G KR ++V + + + +++DEVRLWEDGFKDRYYESKFDV D+
Sbjct: 481 ESMLRPENSGN--KGQKRKINEVSSNDDSDDDQAHDEVRLWEDGFKDRYYESKFDVSPDN 538
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
+AFR V +YV GLCWVL+YYYQGC SW+WYFP+HYAPFASDFINI + T FE GT P
Sbjct: 539 LAFRNNVALQYVRGLCWVLRYYYQGCASWRWYFPYHYAPFASDFINIGGLSTEFEKGTVP 598
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 46/51 (90%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KALAPYY+ L+ E
Sbjct: 630 SQIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALAPYYDSLTEAE 680
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM +LG EDEIFKKRQQ E FK R K KK+R + S+
Sbjct: 372 GFLTDSGDVNLDRVQLIMSELGDAEDEIFKKRQQNELAFKQREKDKKKRNEII-----SS 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
P++IP GQFAP PI + E +K+ + G+ +
Sbjct: 427 FKPTWIPAGQFAPTPLGQTVKPIENARYEAYKMRVQGRNY 466
>gi|270010451|gb|EFA06899.1| hypothetical protein TcasGA2_TC009846 [Tribolium castaneum]
Length = 975
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/371 (80%), Positives = 333/371 (89%), Gaps = 1/371 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIVHC+E K +VNG ++P +S++PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVHCIEQKAVDVNGVRVPTNSAEPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAP++EDEMMVAIFECIDR+F IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPRNEDEMMVAIFECIDRIFNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KET EKI E+ RIR +LL G LP EK K HFDSNCITPGTPFMARLS CLHYYIH
Sbjct: 121 AAKETVEKINEIKRIRAELLLRGAKLPDEKPKEEHFDSNCITPGTPFMARLSNCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+GIKVILSDANVPGEGEHKIMD+IR+QRAQPDHDPNTQHCLCGADADLIML
Sbjct: 181 ERLNNDPGWQGIKVILSDANVPGEGEHKIMDFIRRQRAQPDHDPNTQHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPN+ RPCD+CGQ+GHEMK+C+G A ++ F +E ++IF
Sbjct: 241 GLATHEPNFTIIREEFKPNKPRPCDICGQLGHEMKDCIGGAASAESDTQKVF-AETDYIF 299
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
VRL+VL+EYLE+EL MPNLPF Y FER LDDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 300 VRLNVLKEYLERELQMPNLPFKYEFERVLDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 359
Query: 361 VNLYKKTVYKT 371
+ LYK VYKT
Sbjct: 360 IRLYKDCVYKT 370
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 72/88 (81%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
+++DEVRLWEDGFKDRYYESKFDV D++ FR V YV GLCWVL+YYYQGC SWKWY
Sbjct: 493 QAHDEVRLWEDGFKDRYYESKFDVNSDNLDFRNNVALHYVRGLCWVLRYYYQGCASWKWY 552
Query: 463 FPFHYAPFASDFINIAEVDTNFETGTQP 490
+P+HYAPFASDF++IA + T FE + P
Sbjct: 553 YPYHYAPFASDFVHIAGLSTEFEEDSDP 580
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPEDFKIDLNGKKFAWQGVALLPFV+E+RL KALAPYY++LS EE
Sbjct: 611 ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVNEDRLFKALAPYYKELSPEE 662
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SGDV LERVQLIM +LG EDEIFK RQQ E FK R K K+RR S
Sbjct: 372 GWLTNSGDVNLERVQLIMSELGKAEDEIFKTRQQKELQFKAREKAKRRR---------SE 422
Query: 651 KAPSFIPGGQFA-PQDSPIIDFYPEDFKIDLNGKKFAWQGV-ALLPFVDEERLHKA 704
+ P A Q P+++ E F+I G G+ ++L VD + ++
Sbjct: 423 GYNQYKPNWDLALGQAKPVVNARHEAFEIRKAGMHTQKAGLESMLTPVDSQSSNRG 478
>gi|307183882|gb|EFN70493.1| 5'-3' exoribonuclease 2-like protein [Camponotus floridanus]
Length = 630
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/372 (81%), Positives = 330/372 (88%), Gaps = 3/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV C+E K +G IP +S+ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECIEQKTISADGVCIPVNSADPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMM AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMEAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E+ RIR +L G LPPEK K HFDSNCITPGTPFMARLSACLHYYIH
Sbjct: 121 ASKETTEKINEIQRIRSELANKGAPLPPEKPKEEHFDSNCITPGTPFMARLSACLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN DPGW+ IKVILSDANVPGEGEHKIMD+IR+QR+QPDHDPNTQH LCGADADLIML
Sbjct: 181 ERLNKDPGWRNIKVILSDANVPGEGEHKIMDFIRRQRSQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP-ESVITFGSEVEFI 299
GLATHEPNFTIIREEFKPN+ +PCD+CGQ+GHEM+EC G AEPN + FGSE ++I
Sbjct: 241 GLATHEPNFTIIREEFKPNKPKPCDICGQLGHEMRECTG--AEPNQGQEENAFGSECQYI 298
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL++LREYLE+EL MPNLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+DR
Sbjct: 299 FVRLNILREYLERELYMPNLPFKYDFERAVDDWVFMCFFVGNDFLPHLPSLEIREGAIDR 358
Query: 360 LVNLYKKTVYKT 371
LV LYKK VYKT
Sbjct: 359 LVALYKKAVYKT 370
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Query: 387 GVKRSFDDVD-ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
G KR ++ + ++E+S+DEVRLWEDGFKDRYYESKFDV D++AFR V +YV GL
Sbjct: 490 GQKRKIEETSVDDDDDEQSHDEVRLWEDGFKDRYYESKFDVSPDNLAFRNNVALQYVRGL 549
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWVL+YYYQGC SW+WYFP+HYAPFASDFINI + T FE T P
Sbjct: 550 CWVLRYYYQGCASWRWYFPYHYAPFASDFINIGGLSTEFEKDTVP 594
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLTDSGDV L+RVQLIM DLG +EDEIFKKRQQ E FK R K KKRR+ + S
Sbjct: 372 GFLTDSGDVNLDRVQLIMSDLGDVEDEIFKKRQQNELAFKQREKDKKRRQEII-----SN 426
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKF 685
P +IP GQFAP PI + E +++ + G+ +
Sbjct: 427 FKPKWIPAGQFAPTALGQTVKPIENARYEAYQMRVQGRNY 466
>gi|195438180|ref|XP_002067015.1| GK24252 [Drosophila willistoni]
gi|194163100|gb|EDW78001.1| GK24252 [Drosophila willistoni]
Length = 924
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/381 (80%), Positives = 332/381 (87%), Gaps = 6/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + G+ DS+ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKKLDPETGKNTYEDSTLPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK AE+ RIRE+L+ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYY+
Sbjct: 121 RAAKETIEKRAEIERIREELMTKGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKG+KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA-----EPNPESVITFGS 294
LGLATHEPNFTIIREEF PN+ RPCDVC Q GHEM +C+GL+A N + + G+
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCMGLNAIGSTSAANFKPDVPIGA 300
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
EV+FIFVRLSVLREYL+K L MPNLPF Y FERALDDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 301 EVKFIFVRLSVLREYLKKTLEMPNLPFAYDFERALDDWVFMCFFVGNDFLPHLPSLEIRE 360
Query: 355 GAVDRLVNLYKKTVYKTQEQL 375
GAVDRLV LYKK VYKTQ L
Sbjct: 361 GAVDRLVELYKKCVYKTQGYL 381
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDGFK+RYYESKFDV D++ FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 492 VRLWEDGFKNRYYESKFDVGPDNLQFRYAVALQYVRGLCWVLKYYYQGCSSWNWYFPYHY 551
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 552 APFASDFVNIQGLSTLFEKGTKPFN 576
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 48/51 (94%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL P+YE+L+ EE
Sbjct: 606 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPFYEQLTSEE 656
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ-MKMAAQS 649
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E F+ R K KK+ ER MK QS
Sbjct: 379 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKDRQRREKQFRDREKKKKQWERNDMKSLEQS 438
Query: 650 TKAPSFIPGGQ 660
P + G+
Sbjct: 439 VFGPQAVGAGK 449
>gi|242011511|ref|XP_002426492.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212510618|gb|EEB13754.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 869
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/373 (80%), Positives = 332/373 (89%), Gaps = 2/373 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPSVIV+CVE+KP+ ++G KI DS +PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSVIVYCVEEKPKVIDGVKISVDSLQPNPNGVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMM+ IF+CIDRLF IVRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMIEIFDCIDRLFSIVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE+AEKI E+ R+RE+LL G LPPEK + SHFDSNCITPGTPFM RLSACL YYIH
Sbjct: 121 ASKESAEKIEEITRLREELLNKGAYLPPEKPQESHFDSNCITPGTPFMNRLSACLDYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
D+LNND WKGIKVILSDA+VPGEGEHKIMD+IRKQRAQPDHDPNTQH LCGADADLIML
Sbjct: 181 DKLNNDAAWKGIKVILSDASVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV--ITFGSEVEF 298
GLATHEPNFTIIREEF+PN+ +PC++C Q+GH+MK+C+G + E + TFG EV F
Sbjct: 241 GLATHEPNFTIIREEFRPNKPKPCEICSQLGHDMKDCIGCPKPLDGEMIETTTFGEEVPF 300
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
IFVRLSVLREYLEKEL MP LPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+D
Sbjct: 301 IFVRLSVLREYLEKELTMPGLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIREGAID 360
Query: 359 RLVNLYKKTVYKT 371
RLVNLYK VYKT
Sbjct: 361 RLVNLYKNCVYKT 373
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
RG KR + +S EEEE+ DEVRLWEDGFKDRYYESKFDV D+I FR+ V HEYV GL
Sbjct: 487 RGNKRPLKE--DSMEEEETYDEVRLWEDGFKDRYYESKFDVKSDNIDFRIRVAHEYVRGL 544
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWVL+YYYQGC SWKW+FP+HYAPFASDFINI + T FE GTQP
Sbjct: 545 CWVLRYYYQGCASWKWFFPYHYAPFASDFINIGNLSTQFEKGTQP 589
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 44/51 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFYP DFKIDLNGKKFAWQGVALLPFVDE+RL +ALAP Y+ L+ E
Sbjct: 621 SSIIDFYPLDFKIDLNGKKFAWQGVALLPFVDEKRLFRALAPLYDLLTPAE 671
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GF+TDSGDV L RVQLI+ +LG +EDEIFK RQQTE M+K RN KKR Q K
Sbjct: 375 GFVTDSGDVNLNRVQLILNELGKVEDEIFKHRQQTELMYKRRNAAKKRIALQYK-----N 429
Query: 651 KAPSFIPGGQFAP 663
+ P+ +P GQFAP
Sbjct: 430 EIPASLPVGQFAP 442
>gi|20129299|ref|NP_609082.1| Rat1, isoform A [Drosophila melanogaster]
gi|442626452|ref|NP_001260166.1| Rat1, isoform B [Drosophila melanogaster]
gi|74869864|sp|Q9VM71.2|XRN2_DROME RecName: Full=5'-3' exoribonuclease 2 homolog; AltName:
Full=Ribonucleic acid-trafficking protein 1; Short=dRAT1
gi|10728625|gb|AAF52452.2| Rat1, isoform A [Drosophila melanogaster]
gi|219990665|gb|ACL68706.1| FI04660p [Drosophila melanogaster]
gi|440213467|gb|AGB92702.1| Rat1, isoform B [Drosophila melanogaster]
Length = 908
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/380 (80%), Positives = 332/380 (87%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHY++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDR NN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A N + + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYKT+ L
Sbjct: 361 AVDRLVELYKKCVYKTRGYL 380
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDGFKDRYYESKFDV + FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHY 547
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 548 APFASDFVNIQGLSTMFEKGTKPFN 572
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/97 (57%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 623 QQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQF-APQDSPIIDFYPEDFKID 679
Q TMF+ K E+ M + AA S+ P P + + +SPIIDFYPEDFKID
Sbjct: 558 QGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAKLMSDPESPIIDFYPEDFKID 615
Query: 680 LNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
LNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 616 LNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEE 652
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+ER + +
Sbjct: 378 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQERNQDHGSLNQ 437
Query: 651 KA 652
A
Sbjct: 438 SA 439
>gi|194862714|ref|XP_001970086.1| GG10442 [Drosophila erecta]
gi|190661953|gb|EDV59145.1| GG10442 [Drosophila erecta]
Length = 902
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/380 (80%), Positives = 334/380 (87%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDTDTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIF+CIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHY++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKGIKVILSDANVPGEGEHKIMD+IRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDFIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE----PNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A N + + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTGANFKPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYKT+ L
Sbjct: 361 AVDRLVELYKKCVYKTKGYL 380
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 80/107 (74%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
R KR+ D + +EEE NDEVRLWEDGFKDRYYESKFDV + FR V +YV GL
Sbjct: 465 RNRKRTIDQANLDEDEEEDNDEVRLWEDGFKDRYYESKFDVASGNQQFRYAVALQYVRGL 524
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
CWVLKYYYQGC SW WYFP+HYAPFASDF+NI + T FE GT+P N
Sbjct: 525 CWVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTMFEKGTKPFN 571
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQF-APQDSPIIDFYPED 675
F Q TMF+ K E+ M + AA S+ P P + + +SPIIDFYPED
Sbjct: 553 FVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAKLMSDPESPIIDFYPED 610
Query: 676 FKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
FKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 611 FKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEE 651
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+ER + +
Sbjct: 378 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQERNQDHGSLNQ 437
Query: 651 KA 652
A
Sbjct: 438 SA 439
>gi|194760286|ref|XP_001962372.1| GF15434 [Drosophila ananassae]
gi|190616069|gb|EDV31593.1| GF15434 [Drosophila ananassae]
Length = 911
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/378 (80%), Positives = 335/378 (88%), Gaps = 3/378 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDPDTGRNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIF+CIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+AR+RE+L++ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYY+
Sbjct: 121 RAAKETTEKRLEIARLREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKG+KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGVKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE--PNPESVITFGSEVE 297
LGLATHEPNFTIIREEF PN+ RPCD+C Q GHEM++C GL A N + + G+EV+
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNQFGHEMEKCNGLGATTGANFKPDVPIGAEVK 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV
Sbjct: 301 FIFVRLSVLREYLKQTLVMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 360
Query: 358 DRLVNLYKKTVYKTQEQL 375
DRLV LYKK VYKT+ L
Sbjct: 361 DRLVELYKKCVYKTRGYL 378
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 68/85 (80%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDGFKDRYYESKFDV ++ FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHY 547
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 548 APFASDFVNIQGLSTIFEKGTKPFN 572
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 49/52 (94%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 601 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTSEE 652
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRER 641
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K ++R+ER
Sbjct: 376 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKNRQRREQQFKARDKARRRQER 426
>gi|195471641|ref|XP_002088111.1| GE14198 [Drosophila yakuba]
gi|194174212|gb|EDW87823.1| GE14198 [Drosophila yakuba]
Length = 897
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/380 (80%), Positives = 334/380 (87%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKKVDPDTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIF+CIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ARIRE+L++ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHY++
Sbjct: 121 RAAKETTEKRLEIARIREELMSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA-EPNPESV---ITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A P S + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSASFKPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYKT+ L
Sbjct: 361 AVDRLVELYKKCVYKTKGYL 380
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/107 (65%), Positives = 80/107 (74%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
R KR+ D + ++EE NDEVRLWEDGFKDRYYESKFDV + FR V +YV GL
Sbjct: 465 RNRKRTGDQANLDDDDEEDNDEVRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGL 524
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
CWVLKYYYQGC SW WYFP+HYAPFASDF+NI + T FE GT+P N
Sbjct: 525 CWVLKYYYQGCSSWNWYFPYHYAPFASDFVNIQGLSTAFEKGTKPFN 571
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 600 ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEE 651
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRER 641
G+LT SGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+ER
Sbjct: 378 GYLTTSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKTRDKCRKRQER 428
>gi|60677951|gb|AAX33482.1| RE02462p [Drosophila melanogaster]
Length = 519
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/380 (80%), Positives = 332/380 (87%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDPTLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHY++
Sbjct: 121 RAAKETTEKRLEIARIREELLSRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDR NN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRQNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A N + + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYKT+ L
Sbjct: 361 AVDRLVELYKKCVYKTRGYL 380
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+ER + +
Sbjct: 378 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQERNQDHGSLNQ 437
Query: 651 KA 652
A
Sbjct: 438 SA 439
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 23/31 (74%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVG 438
VRLWEDGFKDRYYESKFDV + FR V
Sbjct: 488 VRLWEDGFKDRYYESKFDVAPGNQQFRYAVA 518
>gi|195338777|ref|XP_002036000.1| GM16241 [Drosophila sechellia]
gi|194129880|gb|EDW51923.1| GM16241 [Drosophila sechellia]
Length = 464
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/375 (81%), Positives = 330/375 (88%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPSVI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECNENKQVDADTGRNIYEDATLPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK EVARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM RLS CLHY++
Sbjct: 121 RAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKCLHYFV 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A N + + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYK 370
VDRLV LYKK VY+
Sbjct: 361 TVDRLVELYKKCVYR 375
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 581 KLFSRMLTYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE 640
+L+ + + G G K +RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+E
Sbjct: 367 ELYKKCVYRQGLSHRLGRCKSDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQE 426
Query: 641 RQMKMAAQSTKA 652
R + + A
Sbjct: 427 RNQDHGSLNQSA 438
>gi|405969602|gb|EKC34564.1| 5'-3' exoribonuclease 2 [Crassostrea gigas]
Length = 954
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 297/374 (79%), Positives = 331/374 (88%), Gaps = 3/374 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRK PS++VHC+E+KP+EVNG KIP D+S+PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKNPSILVHCIEEKPREVNGVKIPVDTSQPNPNDYEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDKPAPK+EDEMM+ IFE IDR+F IVRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEDKPAPKNEDEMMILIFEYIDRIFSIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKET EKI E++R+R++L G LPPEKEKG HFDSNCITPGTPFM RL+ CL YYIH
Sbjct: 121 ASKETKEKIEEMSRLRDELTTKGFNLPPEKEKGEHFDSNCITPGTPFMFRLADCLRYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+ IK+ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT+HCLCGADADL+ML
Sbjct: 181 ERLNNDPGWQNIKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTKHCLCGADADLLML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE---PNPESVITFGSEVE 297
GLATHEP+FTIIREEFKPNQ RPCD+CGQ+GHEMKEC+GL E N E G+E E
Sbjct: 241 GLATHEPHFTIIREEFKPNQPRPCDLCGQLGHEMKECMGLPKEMCGENDELPKVMGAEQE 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL++LREYLE+EL M NLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+
Sbjct: 301 FIFIRLNILREYLERELLMDNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIREGAI 360
Query: 358 DRLVNLYKKTVYKT 371
DRLV LYK V +T
Sbjct: 361 DRLVKLYKSCVRRT 374
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 93/146 (63%), Gaps = 7/146 (4%)
Query: 348 PSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN-- 405
P E+ +G +D + + K + + +++ RG KR +D + ++EEE
Sbjct: 486 PRQEVAKGRMDTMRDSANKNAAAELKAMMTKDDQ----RGEKRKAEDQSKPNDEEEEEEP 541
Query: 406 -DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
DEVRLWEDG+KDRYY SKF V D FR V + YV GLCWVL+YYYQGC SWKWYFP
Sbjct: 542 ADEVRLWEDGWKDRYYSSKFGVDGSDQEFRQTVANHYVRGLCWVLRYYYQGCASWKWYFP 601
Query: 465 FHYAPFASDFINIAEVDTNFETGTQP 490
+HYAPFASDF+NI ++ +FE T P
Sbjct: 602 YHYAPFASDFVNIGQLSNSFEKQTVP 627
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPIIDFYP DFKIDLNGKK+AWQGVALLPFVDE+RL AL Y L+ E E
Sbjct: 658 ESPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDEKRLLSALEKVYPDLTDAERE 711
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 22/96 (22%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKM----- 645
G+LT+SG V LERVQ++M DLG +EDEIFK+R+ TE F+ RNK +K RE++++
Sbjct: 376 GYLTNSGVVNLERVQVVMSDLGEVEDEIFKRRRDTELEFRRRNKQRKEREKRVQFLLSFN 435
Query: 646 -----------------AAQSTKAPSFIPGGQFAPQ 664
Q ++ P + PGGQFAPQ
Sbjct: 436 RAPVMIICKNSKLICECCFQFSQGPRWTPGGQFAPQ 471
>gi|195038968|ref|XP_001990842.1| GH18033 [Drosophila grimshawi]
gi|193895038|gb|EDV93904.1| GH18033 [Drosophila grimshawi]
Length = 873
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 327/380 (86%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLS+KYP VI+ C E+K + + G+ I D++ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKQVDPDTGKNIYEDATLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+E+EMM+AIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMIAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KE EK E+ RIR++LL GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYYI
Sbjct: 121 RAAKEATEKRLEIERIRDELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKG+K+ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT H LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGVKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCDVC Q GHEM +CVGL A N + G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSNNINSPPDVPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL K L MPNLPF Y FERALDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLRKTLEMPNLPFSYDFERALDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYK ++ L
Sbjct: 361 AVDRLVELYKKCVYKARDYL 380
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 8/139 (5%)
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVD-ESSEEEESNDEVRLWED 413
AVD+++ YK+ + G +G KRS + + + ++EEE+NDEVRLWED
Sbjct: 443 AAVDKIITNYKQEASAVRM-------GSNDSQGTKRSSTNANLDDADEEENNDEVRLWED 495
Query: 414 GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
GFK+RYYESKFDV ++ FR V +YV GLCWVLKYYYQGC SW WYFP+HYAPFASD
Sbjct: 496 GFKNRYYESKFDVASGNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHYAPFASD 555
Query: 474 FINIAEVDTNFETGTQPVN 492
F+NI + T FE GT+P N
Sbjct: 556 FVNIQGLSTTFEKGTKPFN 574
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 3/74 (4%)
Query: 646 AAQSTKAPSFIPGGQFAPQ-DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
AA S+ P P Q + +S IIDFYPEDFKIDLNGKKFAWQGVALLPFVDE RL KA
Sbjct: 585 AASSSHVPE--PWAQLMSKPESTIIDFYPEDFKIDLNGKKFAWQGVALLPFVDENRLFKA 642
Query: 705 LAPYYEKLSVEESE 718
L P + +L+ EE +
Sbjct: 643 LGPLHIQLTDEEVQ 656
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
+LT+SGDV L+RVQLIM DLG +ED+IFK RQ+ E +K R K + +
Sbjct: 379 YLTNSGDVSLDRVQLIMTDLGNVEDQIFKDRQRREQQYKARQKRENHK 426
>gi|195388580|ref|XP_002052957.1| GJ23613 [Drosophila virilis]
gi|194151043|gb|EDW66477.1| GJ23613 [Drosophila virilis]
Length = 774
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/381 (79%), Positives = 326/381 (85%), Gaps = 6/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPF-DSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLS+KYP VI+ C E+K +V K F DS+ PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKRVDVETGKTIFEDSTLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+E+EMMVAIF+CIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMVAIFDCIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ RIR +LL GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYYI
Sbjct: 121 RAAKETIEKRLEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNN+P WKGI+VILSDANVPGEGEHKIMDYIRKQRAQPDH+PNT H LCGADADLIM
Sbjct: 181 HDRLNNNPAWKGIQVILSDANVPGEGEHKIMDYIRKQRAQPDHNPNTHHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV-----ITFGS 294
LGLATHEPNFTIIREEF PN+ RPCD+C Q GHEM +CVGL A + + G+
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDICNQFGHEMDKCVGLGAAGTSNNNHFSPDVPIGA 300
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
EV+FIFVRLSVLREYL+K L MPNLPF Y FER LDDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 301 EVKFIFVRLSVLREYLKKTLQMPNLPFTYDFERVLDDWVFMCFFVGNDFLPHLPSLEIRE 360
Query: 355 GAVDRLVNLYKKTVYKTQEQL 375
GA+DRLV LYKK VYKT+ L
Sbjct: 361 GAIDRLVELYKKCVYKTKGYL 381
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 70/85 (82%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWE+GFK+RYYESKFDVP D++ FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 488 VRLWEEGFKNRYYESKFDVPPDNLQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHY 547
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 548 APFASDFVNIQGLSTIFEKGTKPFN 572
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQFAPQ-DSPIIDFYPED 675
F Q T+F+ K E+ M + AA S+ P P Q + DS IIDFYP+D
Sbjct: 554 FVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAQLMSRPDSTIIDFYPDD 611
Query: 676 FKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
FKIDLNGKKFAWQGVALLPFVDE RL KAL P + L+ EE
Sbjct: 612 FKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTDEE 652
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG+V L+RVQLIM DLG +ED+IFK RQ+ E +K R ++R K +S
Sbjct: 379 GYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQYKAR---QQRDNNNSKALEESV 435
Query: 651 KAPS 654
P+
Sbjct: 436 FGPA 439
>gi|170058238|ref|XP_001864833.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877413|gb|EDS40796.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 884
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 309/419 (73%), Positives = 346/419 (82%), Gaps = 5/419 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV CVE K + +G + D +KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKNTDDDGNVLYDDMTKPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAP++EDEMMVAIFECIDRL IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPRNEDEMMVAIFECIDRLMNIVRPRQVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK E+A+IRE+L A GCILPPEKEKG+HFDSNCITPGTPFM RLS CL YY+H
Sbjct: 121 ASKEAAEKATEIAKIREELAAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+NN+PGWKG+KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT H LCGADADLIML
Sbjct: 181 DRMNNNPGWKGLKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFGSEVEFI 299
GLATHE +FTIIREEF PN+ RPCD+C QMGHEMK+C GL + + E S G E +FI
Sbjct: 241 GLATHETHFTIIREEFLPNKERPCDICQQMGHEMKDCAGLKSARDCERSPPPPGKETQFI 300
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL+VL+EYL KEL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIRE A+DR
Sbjct: 301 FVRLNVLKEYLAKELDMPNLPFTYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR 360
Query: 360 LVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDR 418
LV LYKK VYKT+ L ++G V+ D+ + +E N +V ED FK+R
Sbjct: 361 LVTLYKKCVYKTKGYL--TDSGDVTLDRVELIMTDLGYAEDEIFRNRKVT--EDRFKER 415
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 69/86 (80%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E+ DEVRLWEDGFKDRYYESKFDV ++ FR V EYV GLCWVLKYYYQGC SW+WY
Sbjct: 483 ETPDEVRLWEDGFKDRYYESKFDVLPTNMKFRQTVAWEYVRGLCWVLKYYYQGCASWEWY 542
Query: 463 FPFHYAPFASDFINIAEVDTNFETGT 488
FP+HYAPFASDF + V+ +F+ GT
Sbjct: 543 FPYHYAPFASDFRTLQNVNKHFDRGT 568
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 42/51 (82%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF IDLNGKKFAWQGVALLPFVDE+RL KA P +L+ EE
Sbjct: 601 SPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPELTQEE 651
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 48/75 (64%), Gaps = 9/75 (12%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RV+LIM DLG EDEIF+ R+ TE FK RNK +MKM +
Sbjct: 374 GYLTDSGDVTLDRVELIMTDLGYAEDEIFRNRKVTEDRFKERNK-------RMKMQKERE 426
Query: 651 KAPSF--IPGGQFAP 663
+ P F + QFAP
Sbjct: 427 QRPKFDQMHNSQFAP 441
>gi|347971217|ref|XP_309641.5| AGAP004090-PA [Anopheles gambiae str. PEST]
gi|333466642|gb|EAA05380.5| AGAP004090-PA [Anopheles gambiae str. PEST]
Length = 1042
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/381 (78%), Positives = 325/381 (85%), Gaps = 10/381 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVI+ CVE K + G + + S PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIIECVEQKAVDDQGNVVYENLSDPNPNRVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMM+AIFECIDRL IVRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMIAIFECIDRLMNIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKETAEK AE+ARIRE+L A G ILPPEKEKGSHFDSNCITPGTPFM RLS CL YY+H
Sbjct: 121 ASKETAEKAAEMARIREELAAKGAILPPEKEKGSHFDSNCITPGTPFMDRLSRCLQYYVH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+NN+PGWK +KVILSDANVPGEGEHKIMDYIRKQR QPD+DPNT H LCGADADLIML
Sbjct: 181 DRMNNNPGWKNLKVILSDANVPGEGEHKIMDYIRKQRVQPDYDPNTHHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE------PNPESVITFGS 294
GLATHE +FTIIREEF PN+ RPCD+C Q+GHEMK C GL +E P P G
Sbjct: 241 GLATHETHFTIIREEFLPNKDRPCDICQQIGHEMKSCTGLQSERELADKPPPMP----GK 296
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
E +FIFVRL+VL+EYL+KEL MPNLPFPY FER +DDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 297 ETQFIFVRLNVLKEYLQKELDMPNLPFPYDFERVVDDWVFMCFFVGNDFLPHLPSLEIRE 356
Query: 355 GAVDRLVNLYKKTVYKTQEQL 375
A+DRLV LYKK VYKT+ L
Sbjct: 357 NAIDRLVTLYKKCVYKTRGYL 377
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 80/107 (74%), Gaps = 4/107 (3%)
Query: 386 RGVKRSFDD----VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
RG KR ++ EE+E+ DEVRLWEDGFKDRYYESKFDV +I FR V EY
Sbjct: 490 RGTKRKAEEPLAVTVTEDEEKETPDEVRLWEDGFKDRYYESKFDVMPQNIKFRQTVAWEY 549
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V GLCWVL+YYYQGC SW+WYFP+HYAPFASDF ++ V+T+F+ GT
Sbjct: 550 VRGLCWVLRYYYQGCASWEWYFPYHYAPFASDFKHLENVNTHFDRGT 596
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 42/51 (82%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF+IDLNGKKFAWQGVALLPFVDE+RL KA P L+ EE
Sbjct: 629 SPIIDFYPIDFRIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPLLTEEE 679
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 9/75 (12%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG V L+RV++IM DLG EDEIF++R+ +E FK RNK +M+M +
Sbjct: 375 GYLTDSGSVLLDRVEMIMTDLGFAEDEIFRQRKVSEDRFKERNK-------RMRMQNERQ 427
Query: 651 KAPSF--IPGGQFAP 663
+ P+F QFAP
Sbjct: 428 RRPNFEQYNNSQFAP 442
>gi|195107132|ref|XP_001998170.1| GI23821 [Drosophila mojavensis]
gi|193914764|gb|EDW13631.1| GI23821 [Drosophila mojavensis]
Length = 793
Score = 626 bits (1614), Expect = e-176, Method: Compositional matrix adjust.
Identities = 301/380 (79%), Positives = 322/380 (84%), Gaps = 5/380 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLS+KYP VI+ C E+K + G+ I D + PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSKKYPCVIIECNENKKTDAETGKTIYEDPTLPNPNGVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+E+EMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEEEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+KET EK E+ RIR +LL GC LPPEKEKG HFDSNCITPGTPFM RLS CLHYYI
Sbjct: 121 RAAKETIEKRIEIERIRNELLTRGCKLPPEKEKGEHFDSNCITPGTPFMDRLSKCLHYYI 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H R+N +P WK I+VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT H LCGADADLIM
Sbjct: 181 HHRINTNPAWKRIQVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVITFGSE 295
LGLATHEPNFTIIREEF PN+ RPCDVC Q GHEM +CVGL A N I G+E
Sbjct: 241 LGLATHEPNFTIIREEFLPNKPRPCDVCNQFGHEMDKCVGLSAVGSSNCNFTPDIPIGAE 300
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+FIFVRLSVLREYL+K L MPNLPF Y FER LDDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 301 VKFIFVRLSVLREYLKKTLQMPNLPFSYDFERVLDDWVFMCFFVGNDFLPHLPSLEIREG 360
Query: 356 AVDRLVNLYKKTVYKTQEQL 375
AVDRLV LYKK VYKT+ L
Sbjct: 361 AVDRLVELYKKCVYKTKGYL 380
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G KRS ++EE++DEVRLWEDGFK+RYYESKFDV D++ FR V +YV GLC
Sbjct: 462 GSKRS-STAASLDDDEENHDEVRLWEDGFKNRYYESKFDVSPDNLQFRYAVALQYVRGLC 520
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
WVLKYYYQGC SW WYFP+HYAPFASDF+NI + T FE GT+P N
Sbjct: 521 WVLKYYYQGCASWNWYFPYHYAPFASDFVNIQGLSTIFEKGTKPFN 566
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQFAPQ-DSPIIDFYPED 675
F Q T+F+ K E+ M + AA S+ P P + + DS IIDFYPED
Sbjct: 548 FVNIQGLSTIFEKGTKPFNPLEQLMGVFPAASSSHVPK--PWAELMSKPDSTIIDFYPED 605
Query: 676 FKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
FKIDLNGKKFAWQGVALLPFVDE RL KAL P + L+ EE
Sbjct: 606 FKIDLNGKKFAWQGVALLPFVDENRLFKALIPLHSHLTEEE 646
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG+V L+RVQLIM DLG +ED+IFK RQ+ E FK R +KR K QS
Sbjct: 378 GYLTDSGEVNLDRVQLIMTDLGNVEDQIFKDRQRREQQFKAR---QKRENNNFKALEQSV 434
Query: 651 KAPSFI 656
PS +
Sbjct: 435 FGPSAV 440
>gi|427778459|gb|JAA54681.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Rhipicephalus
pulchellus]
Length = 856
Score = 622 bits (1604), Expect = e-175, Method: Compositional matrix adjust.
Identities = 300/410 (73%), Positives = 334/410 (81%), Gaps = 31/410 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS++ HCVE+KPQ V+G KIP D++KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVAHCVEEKPQVVDGVKIPVDTTKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+KPAPK+EDEMMV IFE IDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKNEDEMMVDIFEYIDRIFSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE+AEK+ E++RIR +L G LPPEK+K HFDSNCITPGTPFM RL+ CLHYYIH
Sbjct: 121 ASKESAEKVEEMSRIRAELRDRGVPLPPEKDKSEHFDSNCITPGTPFMDRLAKCLHYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK I+VILSDANVPGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIML
Sbjct: 181 DRLNNDPGWKNIQVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE---------SVIT 291
GLATHEPNFTIIREEFKPNQ RPC++CGQ+GHEMK+C GL E E S
Sbjct: 241 GLATHEPNFTIIREEFKPNQPRPCELCGQLGHEMKDCQGLPKEKTGEFDELEKPIGSETE 300
Query: 292 F--------------------GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDD 331
F GSE EFIF+RL+VL EYLE+EL M NLPF ++ ERA+DD
Sbjct: 301 FIFLXXPKEKTGEFDELEKPIGSETEFIFLRLNVLHEYLERELRMDNLPFDFNIERAIDD 360
Query: 332 WVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
WVFMCFFVGNDFLPHLPSLEIREGA+DRLVNLYKK VY+T L ENG
Sbjct: 361 WVFMCFFVGNDFLPHLPSLEIREGAIDRLVNLYKKAVYRTGGYL--TENG 408
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 168/366 (45%), Gaps = 90/366 (24%)
Query: 373 EQLRQEENGGGGGRG------VKRSFDDVDESSEEEES----------NDEVRLWEDGFK 416
E R +GGG ++ ++ D D E+ + +DEVRLWEDG++
Sbjct: 497 EHRRNLSDGGGSNANGRLESMLRPAYSDSDVRGEKRKHEDSSDEEEEPHDEVRLWEDGWR 556
Query: 417 DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
+RYY SKFD+ D++AFR V YV GLCWVL+YYYQGC SWKW+FP+HYAPFASDF
Sbjct: 557 ERYYVSKFDISPDNVAFRHDVASAYVEGLCWVLRYYYQGCASWKWFFPYHYAPFASDF-- 614
Query: 477 IAEVDTNFETGTQPVNNNRILKFILYHFDNKMFFWNKSLINIAEVDTNFETGTQP---VN 533
IN+ ++ FE GTQP +
Sbjct: 615 ---------------------------------------INVGDLKIEFERGTQPFKPME 635
Query: 534 NRILKFYVSDNIHLLILLVLRSW--LVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPG 591
+ F + HL + W L+ I + + K + +
Sbjct: 636 QLMSVFPAASKQHLPL-----PWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVALLP 690
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
F+ + LE VQ + + G + FK +Q ++F AA
Sbjct: 691 FVDEK--RLLETVQTVXXERGT---QPFKPMEQLMSVFP---------------AASKQH 730
Query: 652 APSFIPGGQFAPQ-DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYE 710
P +P DSPIIDFYP DFKIDLNGKK+AWQGVALLPFVDE+RL + + Y
Sbjct: 731 LP--LPWADLMDDPDSPIIDFYPTDFKIDLNGKKYAWQGVALLPFVDEKRLLETVQTVYP 788
Query: 711 KLSVEE 716
L+ +E
Sbjct: 789 HLTEDE 794
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 53/73 (72%), Gaps = 3/73 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V L RVQLIM +LG EDEIFK+RQQ E FK R K KK ++MKM A+S
Sbjct: 402 GYLTENGFVALNRVQLIMSELGDAEDEIFKRRQQNELNFKRRMKEKK---KRMKMEAESE 458
Query: 651 KAPSFIPGGQFAP 663
P++ PGGQFAP
Sbjct: 459 ARPAWTPGGQFAP 471
>gi|241786594|ref|XP_002414458.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
gi|215508669|gb|EEC18123.1| 5'->3' exoribonuclease, putative [Ixodes scapularis]
Length = 759
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 291/381 (76%), Positives = 327/381 (85%), Gaps = 4/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPS++VHCVE+K V+G K+P D +KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEK--VVDGVKVPVDMTKPNPNDVEFDNLYLDMNGIIH 58
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+KPAPK+EDEMMV IFE IDR+ +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 59 PCCHPENKPAPKNEDEMMVDIFEYIDRIMSVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 118
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKETAEK+ E++RIR +L G LPPEK K HFDSNCITPGTPFMARL+ CLHYY+H
Sbjct: 119 ASKETAEKVEEMSRIRTELRDKGIPLPPEKPKSEHFDSNCITPGTPFMARLAKCLHYYVH 178
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+NNDPGWK I+VILSDANVPGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIML
Sbjct: 179 DRMNNDPGWKNIEVILSDANVPGEGEHKIMDFIRRQRANPKHDPNTHHCLCGADADLIML 238
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEPNFTIIREEFKPNQ RPC++CGQ+GHEMK+C GL E E G E EFIF
Sbjct: 239 GLATHEPNFTIIREEFKPNQPRPCELCGQLGHEMKDCQGLAKEKTGELEKPIGCETEFIF 298
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+RL+VLREYL ++L M NLPF ++ ERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+DRL
Sbjct: 299 LRLNVLREYLTRDLHMDNLPFTFNIERAIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRL 358
Query: 361 VNLYKKTVYKTQEQLRQEENG 381
+ LYKK VYKT L ENG
Sbjct: 359 ITLYKKAVYKTGGYL--TENG 377
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 65/95 (68%), Positives = 79/95 (83%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
D+SS+EEE +DEVRLWEDG+K+RYY SKFD+ D++AFR V YV GLCWVL+YYYQG
Sbjct: 465 DDSSDEEEPHDEVRLWEDGWKERYYVSKFDINSDNVAFRHEVATAYVEGLCWVLRYYYQG 524
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
C SWKW+FP+HYAPFASDFIN+ ++ NFE TQP
Sbjct: 525 CASWKWFFPYHYAPFASDFINVGDIKINFERDTQP 559
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
A++ P+F G DSPIIDFYP DFKIDLNGKK+AWQGVALLPFVDE RL + +
Sbjct: 573 ASKQHLPPAF--GDLMDDPDSPIIDFYPIDFKIDLNGKKYAWQGVALLPFVDERRLLETV 630
Query: 706 APYYEKLSVEE 716
Y L+ +E
Sbjct: 631 KTVYPTLTEDE 641
>gi|157138197|ref|XP_001664171.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108880656|gb|EAT44881.1| AAEL003800-PA [Aedes aegypti]
Length = 958
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 310/425 (72%), Positives = 343/425 (80%), Gaps = 17/425 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV CVE K + +G + D ++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMMVAIFECIDRL IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK AEV +IR++L A GCILPPEKEKG+HFDSNCITPGTPFM RLS CL YY+H
Sbjct: 121 ASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+NN+PGWKG+K+ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT H LCGADADLIML
Sbjct: 181 DRMNNNPGWKGLKIILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTHHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE------PNPESVITFGS 294
GLATHE +FTIIREEF PN+ RPCD+C MGHEMK+C GL +E P P G+
Sbjct: 241 GLATHETHFTIIREEFLPNKERPCDICQIMGHEMKDCTGLQSERDINRTPPPP-----GA 295
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
E ++IFVRL+VL+EYL KEL MPNLPF Y FER +DDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 296 ETQYIFVRLNVLKEYLAKELDMPNLPFKYDFERVIDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKR-SFDDVDESSEEEESNDEVRLWED 413
A+DRLV LYKK VYKT+ L G V R D E+E + ++ ED
Sbjct: 356 NAIDRLVTLYKKCVYKTKGYLTD-----SGSVTVDRVELIMTDLGYAEDEIFRQRKVTED 410
Query: 414 GFKDR 418
FK+R
Sbjct: 411 RFKER 415
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 80/105 (76%), Gaps = 2/105 (1%)
Query: 386 RGVKRSFDD--VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVL 443
RG KR D+ + EE E+ DEVRLWEDGFKDRYYESKFDV ++ FR V EYV
Sbjct: 484 RGQKRKADEPLTPAAVEEAETPDEVRLWEDGFKDRYYESKFDVAPQNMKFRQTVAWEYVR 543
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
GLCWVLKYYYQGC SW+WYFP+HYAPFASDF ++ V+T+F+ GT
Sbjct: 544 GLCWVLKYYYQGCASWEWYFPYHYAPFASDFKGLSNVNTHFDRGT 588
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 41/51 (80%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF IDLNGKKFAWQGVALLPFVDE+RL KA P L+ EE
Sbjct: 621 SPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFKATDPKVPSLTHEE 671
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNK-MKKRRERQMKMAAQS 649
G+LTDSG V ++RV+LIM DLG EDEIF++R+ TE FK RNK MK ++ER+ + +
Sbjct: 374 GYLTDSGSVTVDRVELIMTDLGYAEDEIFRQRKVTEDRFKERNKRMKLQKEREQRPNFEQ 433
Query: 650 TKAPSFIP---GGQFAPQ 664
F P G PQ
Sbjct: 434 MNKSQFAPTPLGRGITPQ 451
>gi|149408751|ref|XP_001505862.1| PREDICTED: 5'-3' exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 950
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 321/375 (85%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS++V+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVVNCVEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AE E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGAEATVEKQRVREEILAKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNN+PGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNEPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q+GHE+K+C GL E E + SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQLGHEVKDCQGLAREKQGEFDELADSLPCSEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFI++RL+VLREYLEKEL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIYLRLNVLREYLEKELTMASLPFPFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKSVVHKT 374
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKVEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ +E+
Sbjct: 622 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDEN 674
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E FK ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFKR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG PQ
Sbjct: 428 DHPAFTPGGILTPQ 441
>gi|147899710|ref|NP_001091411.1| 5'-3' exoribonuclease 2 [Xenopus laevis]
gi|126631948|gb|AAI33744.1| LOC100049102 protein [Xenopus laevis]
Length = 457
Score = 598 bits (1542), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/375 (76%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHCVE KP+E N KIP D++KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEQKPKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E + E RIRE++L+ G LP E+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGVESVEEKNRIREEVLSKGGYLPKEEMK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+VPGEGEHKIMDYIR+QRAQP HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEP FTIIREEFKPNQ RPC +CGQ GHE+KEC G+ E E + G E
Sbjct: 240 GLATHEPYFTIIREEFKPNQPRPCGLCGQFGHEIKECQGMPREKKGEHDEFAGAPPGCEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL++LREYLEKEL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLNILREYLEKELTMASLPFEFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V LERVQ+IM +G +ED IFKKR++ + F
Sbjct: 376 GYLTESGFVNLERVQMIMLAVGEVEDNIFKKRKEDDEHF 414
>gi|148696569|gb|EDL28516.1| 5'-3' exoribonuclease 2, isoform CRA_d [Mus musculus]
Length = 1002
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 20 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 79
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 80 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 139
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 140 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 198
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 199 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 258
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 259 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 318
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 319 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 378
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 379 IDRLVNIYKNVVHKT 393
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 510 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 566
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 567 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 610
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 641 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 693
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 395 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 446
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 447 DQPAFTPSGILTPH 460
>gi|327270678|ref|XP_003220116.1| PREDICTED: 5'-3' exoribonuclease 2-like [Anolis carolinensis]
Length = 957
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/385 (74%), Positives = 319/385 (82%), Gaps = 7/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV C E+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E RIRE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+
Sbjct: 121 ASKEGVEGAEEKQRIREEIMRKGGFLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ +PC +CGQ GHE+KEC GL E E + G E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCGQFGHEVKECQGLPKEKQGEHDQFADSPPGMEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VL+EYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLKEYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLVN+YK V+KT L ENG
Sbjct: 360 IDRLVNIYKNVVHKTGGYL--TENG 382
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV +D FR V YV GLC
Sbjct: 492 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDVNDKKFRHKVVQSYVEGLC 548
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 549 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMFSDFEKGTKP 592
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE
Sbjct: 623 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEE 674
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF--KMRNKMKKRRERQMKMAAQ 648
G+LT++G V L+RVQ+IM +G +ED IFKKR+ E F + + K K+ + Q MA
Sbjct: 376 GYLTENGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEENFKRRQKEKRKRMKREQHSMA-- 433
Query: 649 STKAPSFIPGGQFAPQ 664
GGQF PQ
Sbjct: 434 ---------GGQFTPQ 440
>gi|149041185|gb|EDL95118.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 951
Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GLKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAP 663
P+F P G P
Sbjct: 428 DQPAFTPSGILTP 440
>gi|301620220|ref|XP_002939479.1| PREDICTED: 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
gi|89271859|emb|CAJ82319.1| 5'-3' exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 931
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/375 (76%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVH VE+KP+E N KIP D++KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHSVEEKPKECNNIKIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E RIRE++L+ G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGVESSEEKQRIREEVLSKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+VPGEGEHKIMDYIR+QRAQP HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDYIRRQRAQPHHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEP FTIIREEFKPN+ +PC +CGQ GHE+KEC G+ E E + G E
Sbjct: 240 GLATHEPYFTIIREEFKPNKPKPCGLCGQFGHEIKECQGMPREKKGEHDEFADTPPGCEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLEKEL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLNVLREYLEKELTMASLPFQFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 88/154 (57%), Gaps = 5/154 (3%)
Query: 337 FFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVD 396
F F P +L +V +N ++ Y+ + Q + G KR + D
Sbjct: 434 FVTSGQFAPR--ALGQGSCSVPEAINNPRQEAYRMRMQNAHSVDNASPNTGQKRKAEGSD 491
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
E E D +RLWE+G+K RYY++KFDV D FR V YV GLCWVL+YYYQGC
Sbjct: 492 SEPEPE---DNIRLWEEGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGLCWVLRYYYQGC 548
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
SWKW+FPFHYAPFASDF NI+ + FE GT+P
Sbjct: 549 ASWKWFFPFHYAPFASDFENISCLFKEFEKGTKP 582
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYP+DF IDLNGKKFAWQGVALLPFVDE RL AL Y L+ +E+
Sbjct: 613 DSSIIDFYPDDFAIDLNGKKFAWQGVALLPFVDERRLRAALEEVYPDLTPDET 665
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG V LERVQ+IM +G +ED IFKKR++ + FK R K + K
Sbjct: 376 GYLTDSGFVNLERVQMIMLAVGEVEDNIFKKRKEDDEHFKRRQKER------KKRMKAEH 429
Query: 651 KAPSFIPGGQFAPQ 664
+ PSF+ GQFAP+
Sbjct: 430 QKPSFVTSGQFAPR 443
>gi|74227371|dbj|BAE21766.1| unnamed protein product [Mus musculus]
Length = 417
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMR 632
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ R
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRR 417
>gi|117606214|ref|NP_036047.2| 5'-3' exoribonuclease 2 [Mus musculus]
gi|30173483|sp|Q9DBR1.1|XRN2_MOUSE RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein Dhm1
gi|12836253|dbj|BAB23573.1| unnamed protein product [Mus musculus]
gi|26343603|dbj|BAC35458.1| unnamed protein product [Mus musculus]
gi|32451718|gb|AAH54743.1| 5'-3' exoribonuclease 2 [Mus musculus]
gi|74188828|dbj|BAE39193.1| unnamed protein product [Mus musculus]
gi|148696571|gb|EDL28518.1| 5'-3' exoribonuclease 2, isoform CRA_f [Mus musculus]
Length = 951
Score = 597 bits (1538), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|26327149|dbj|BAC27318.1| unnamed protein product [Mus musculus]
Length = 952
Score = 596 bits (1537), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|148696566|gb|EDL28513.1| 5'-3' exoribonuclease 2, isoform CRA_a [Mus musculus]
Length = 915
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/379 (75%), Positives = 319/379 (84%), Gaps = 5/379 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQL 375
+DRLVN+YK V+KT +
Sbjct: 360 IDRLVNIYKNVVHKTGDSF 378
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 455 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 511
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 512 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 555
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 586 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 638
>gi|126303629|ref|XP_001373979.1| PREDICTED: 5'-3' exoribonuclease 2 [Monodelphis domestica]
Length = 947
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++L+ G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMESTIEKQRVREEILSKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q+GHE+K+C GL E E SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFI++RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIYIRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV G
Sbjct: 489 GGGIKRKAEDSDSEPEPE---DNVRLWESGWKQRYYKNKFDVDAADDKFRRKVVQSYVEG 545
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
LCWVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 546 LCWVLRYYYQGCASWKWYYPFHYAPFASDFDGIADMPSDFEKGTRP 591
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ +E+
Sbjct: 622 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDET 674
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E FK ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEESFKR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F+P G PQ
Sbjct: 428 DQPAFVPSGILTPQ 441
>gi|344279981|ref|XP_003411764.1| PREDICTED: 5'-3' exoribonuclease 2 [Loxodonta africana]
Length = 950
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/375 (76%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKRGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YKK V+KT
Sbjct: 360 IDRLVNIYKKVVHKT 374
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA + ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIASMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 675
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG PQ
Sbjct: 428 DQPAFTPGGILTPQ 441
>gi|149041186|gb|EDL95119.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 915
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/379 (75%), Positives = 319/379 (84%), Gaps = 5/379 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQL 375
+DRLVN+YK V+KT +
Sbjct: 360 IDRLVNIYKNVVHKTGDSF 378
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 455 GLKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 511
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 512 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKP 555
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 586 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 638
>gi|335304534|ref|XP_003134355.2| PREDICTED: 5'-3' exoribonuclease 2 [Sus scrofa]
Length = 950
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 318/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + + +E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPSAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RLSVLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
PSF PGG P
Sbjct: 428 DQPSFSPGGILTPH 441
>gi|74207538|dbj|BAE40020.1| unnamed protein product [Mus musculus]
Length = 951
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+R +VLREYLE+EL M +LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRPNVLREYLERELTMASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 414
>gi|390354842|ref|XP_003728421.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Strongylocentrotus
purpuratus]
Length = 1010
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/424 (69%), Positives = 336/424 (79%), Gaps = 7/424 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPS++VHC+E+K +EV+ +IP D+++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+KPAPKDEDEMM IF IDRL IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE+ +K ++ARIR ++ G LPP K K SHFDSNCITPGT FM RL+ CL YYI
Sbjct: 121 ASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYIT 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN+DPGWK IKVILSDAN PGEGEHKIMDYIRKQRA PDHDPNT HC+CGADADLIML
Sbjct: 181 ERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE---SVITFGSEVE 297
GLATHE NFTIIREEFKPNQ R C++C Q GHEMKEC GL E E + G+E E
Sbjct: 241 GLATHEVNFTIIREEFKPNQRRACELCNQEGHEMKECQGLPKERANELDTIPVPQGAETE 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL++L+EYLEKEL M LPF + ERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+
Sbjct: 301 FIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREGAI 360
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKD 417
DRL+ LYKK VYKT+ L ENG V+ D+ E+ E+E + R E GF+
Sbjct: 361 DRLIRLYKKAVYKTKGYL--TENGVVNLERVQLMMTDLGEA--EDEIFKKRRTTELGFRQ 416
Query: 418 RYYE 421
R E
Sbjct: 417 RNKE 420
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Query: 382 GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
GG GRG KR + +E +++++ VRLWEDG+K+RYY +KFDVP D FR V Y
Sbjct: 485 GGEGRGTKRGHGEEEEDEDKDDT---VRLWEDGWKERYYRNKFDVPSSDHDFRAKVVACY 541
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V GLCWVL+YYYQGC SWKWYFP+HYAPFASDF++I ++ +FE GT+P
Sbjct: 542 VEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEP 590
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V LERVQL+M DLG EDEIFKKR+ TE F+ RNK + +R+R S+
Sbjct: 376 GYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFRQRNKERNKRQR-------SS 428
Query: 651 KAPSFIPGGQFAPQDSPII 669
AP+F+PGG AP +PI
Sbjct: 429 NAPAFVPGGVLAP--TPIT 445
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
DSPIID YP+DF+IDLNGKK+AWQGVALLPFVDE RL LA Y+ L+
Sbjct: 621 DSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLT 669
>gi|28503006|gb|AAH47182.1| 5'-3' exoribonuclease 2 [Danio rerio]
gi|182889854|gb|AAI65726.1| Xrn2 protein [Danio rerio]
Length = 540
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/385 (74%), Positives = 321/385 (83%), Gaps = 7/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHC+E+K +E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E ++RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+
Sbjct: 121 ASKEGVELAEEKQKMREEVIERGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRL NDPGW+ I V LSDA+VPGEGEHKIMDYIR+QR QP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ RPC +C QMGHE+K+C GL E E + SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+SFER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLV +YK V+KT L ENG
Sbjct: 360 IDRLVGIYKDVVHKTGGYL--TENG 382
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V LERV+LIMQ +G+ ED IFKKR++ + FK R K K ++
Sbjct: 376 GYLTENGFVNLERVELIMQAVGVAEDNIFKKRKEDDESFKRRMK-------DKKKRMKAE 428
Query: 651 KAPSFIPGGQFAPQ 664
+ PSF+PGGQFAP
Sbjct: 429 QRPSFLPGGQFAPH 442
>gi|355729473|gb|AES09879.1| 5'-3' exoribonuclease 2 [Mustela putorius furo]
Length = 412
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDE 411
>gi|281339379|gb|EFB14963.1| hypothetical protein PANDA_012248 [Ailuropoda melanoleuca]
Length = 929
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 675
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 428 DQPAFSPGGILTPH 441
>gi|390354844|ref|XP_795068.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Strongylocentrotus
purpuratus]
Length = 999
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 293/424 (69%), Positives = 336/424 (79%), Gaps = 7/424 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPS++VHC+E+K +EV+ +IP D+++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCLEEKAKEVDEVRIPVDTTQPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+KPAPKDEDEMM IF IDRL IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKDEDEMMREIFLYIDRLISIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE+ +K ++ARIR ++ G LPP K K SHFDSNCITPGT FM RL+ CL YYI
Sbjct: 121 ASKESRDKRQDIARIRAEIADRGGYLPPPKAKESHFDSNCITPGTEFMFRLADCLRYYIT 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN+DPGWK IKVILSDAN PGEGEHKIMDYIRKQRA PDHDPNT HC+CGADADLIML
Sbjct: 181 ERLNSDPGWKDIKVILSDANTPGEGEHKIMDYIRKQRANPDHDPNTHHCMCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE---SVITFGSEVE 297
GLATHE NFTIIREEFKPNQ R C++C Q GHEMKEC GL E E + G+E E
Sbjct: 241 GLATHEVNFTIIREEFKPNQRRACELCNQEGHEMKECQGLPKERANELDTIPVPQGAETE 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL++L+EYLEKEL M LPF + ERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+
Sbjct: 301 FIFLRLNILKEYLEKELWMTGLPFTFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREGAI 360
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKD 417
DRL+ LYKK VYKT+ L ENG V+ D+ E+ E+E + R E GF+
Sbjct: 361 DRLIRLYKKAVYKTKGYL--TENGVVNLERVQLMMTDLGEA--EDEIFKKRRTTELGFRQ 416
Query: 418 RYYE 421
R E
Sbjct: 417 RNKE 420
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Query: 382 GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
GG GRG KR + +E +++++ VRLWEDG+K+RYY +KFDVP D FR V Y
Sbjct: 485 GGEGRGTKRGHGEEEEDEDKDDT---VRLWEDGWKERYYRNKFDVPSSDHDFRAKVVACY 541
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V GLCWVL+YYYQGC SWKWYFP+HYAPFASDF++I ++ +FE GT+P
Sbjct: 542 VEGLCWVLRYYYQGCASWKWYFPYHYAPFASDFLDIKDLPNDFEKGTEP 590
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%), Gaps = 9/79 (11%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V LERVQL+M DLG EDEIFKKR+ TE F+ RNK + +R+R S+
Sbjct: 376 GYLTENGVVNLERVQLMMTDLGEAEDEIFKKRRTTELGFRQRNKERNKRQR-------SS 428
Query: 651 KAPSFIPGGQFAPQDSPII 669
AP+F+PGG AP +PI
Sbjct: 429 NAPAFVPGGVLAP--TPIT 445
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
DSPIID YP+DF+IDLNGKK+AWQGVALLPFVDE RL LA Y+ L+
Sbjct: 621 DSPIIDLYPDDFQIDLNGKKYAWQGVALLPFVDEHRLLTTLAGVYDNLT 669
>gi|296200314|ref|XP_002747533.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Callithrix jacchus]
Length = 950
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPTGILTPH 441
>gi|403283597|ref|XP_003933201.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 950
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPTGILTPH 441
>gi|349604825|gb|AEQ00267.1| 5'-3' exoribonuclease 2-like protein, partial [Equus caballus]
Length = 417
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMR 632
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ R
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRR 417
>gi|301069399|ref|NP_001001944.2| 5'-3' exoribonuclease 2 [Danio rerio]
Length = 952
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 285/385 (74%), Positives = 321/385 (83%), Gaps = 7/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHC+E+K +E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCLEEKAKEYNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E ++RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+
Sbjct: 121 ASKEGVELAEEKQKMREEVIERGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRL NDPGW+ I V LSDA+VPGEGEHKIMDYIR+QR QP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLTNDPGWRNITVFLSDASVPGEGEHKIMDYIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ RPC +C QMGHE+K+C GL E E + SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPRPCALCSQMGHEIKDCQGLPREKQGEHDEFADTIPVSEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+SFER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLAVLREYLERELTMASLPFPFSFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLV +YK V+KT L ENG
Sbjct: 360 IDRLVGIYKDVVHKTGGYL--TENG 382
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 79/113 (69%), Gaps = 3/113 (2%)
Query: 378 EENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
E +G RGVKR DD D E E D VRLWEDG+K RYY++KFDV D FR V
Sbjct: 490 ESSGSMDNRGVKRKADDSDSEPEPE---DNVRLWEDGWKQRYYKTKFDVDATDDEFRKKV 546
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I + ++FE GT+P
Sbjct: 547 VQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFSDFEKGTKP 599
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE
Sbjct: 630 ESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYNDLTPEE 681
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V LERV+LIMQ +G+ ED IFKKR++ + FK R K K ++
Sbjct: 376 GYLTENGFVNLERVELIMQAVGVAEDNIFKKRKEDDESFKRRMKD-------KKKRMKAE 428
Query: 651 KAPSFIPGGQFAPQ 664
+ PSF+PGGQFAP
Sbjct: 429 QRPSFLPGGQFAPH 442
>gi|301775465|ref|XP_002923152.1| PREDICTED: 5'-3' exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 950
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 675
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 428 DQPAFSPGGILTPH 441
>gi|432946152|ref|XP_004083793.1| PREDICTED: 5'-3' exoribonuclease 2-like [Oryzias latipes]
Length = 972
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/381 (73%), Positives = 321/381 (84%), Gaps = 5/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHCVE+K +E NG +IP D++KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E + E R+RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+
Sbjct: 121 ASKEGVELVDEKQRMREEIIQRGGYLPPEEIK-ERFDSNCITPGTEFMDNLAHCLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RL+NDPGWK + V LSDA+VPGEGEHKIMD+IR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 ERLSNDPGWKNVVVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ RPC +CGQ GHEMK+C G+ E + + SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPRPCSLCGQTGHEMKDCQGVAREKQGQHDEFADTMPVSEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYLE+EL M +LPFP+ FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQ 377
+DRLVN+YK V+KT L Q
Sbjct: 360 IDRLVNIYKDVVHKTGGYLTQ 380
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 365 KKTVYKTQEQLRQEENGGGGG------RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDR 418
K + LR E + G R KR +D D E E D VRLWEDG+K R
Sbjct: 474 KNAAQSLKAMLRNEGSSSSGANESQDRRAPKRKAEDSDSDPEPE---DNVRLWEDGWKQR 530
Query: 419 YYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIA 478
YY++KFDV D FR V YV GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I
Sbjct: 531 YYKNKFDVDVTDSDFRKKVVQSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIK 590
Query: 479 EVDTNFETGTQP 490
E+ T FE T P
Sbjct: 591 EMFTEFEKDTMP 602
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE+
Sbjct: 633 ESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPDLTPEEA 685
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT +G V LERV++IMQ +G+ ED IFKKR++ E F+ RNK K K
Sbjct: 376 GYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKEDEENFRRRNKEK------RKRMKVEQ 429
Query: 651 KAPSFIPGGQFAPQ 664
+ P+++ GQFAPQ
Sbjct: 430 QGPAYLTTGQFAPQ 443
>gi|387015832|gb|AFJ50035.1| 5'-3' exoribonuclease 2-like [Crotalus adamanteus]
Length = 945
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/385 (74%), Positives = 317/385 (82%), Gaps = 7/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV C E+K +E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVSCTEEKAKEYNGIKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E + E RIR++++ G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMESVEEKQRIRQEIMEKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE K+C GL E E + G E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHETKDCQGLPKEKQGEHDQFADCPPGMEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLVN+YK V+KT L ENG
Sbjct: 360 IDRLVNIYKNVVHKTGGYL--TENG 382
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV +D FR V YV GLC
Sbjct: 492 GIKRKTEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDVNDKKFRRKVVQSYVEGLC 548
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 549 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADLVSDFEKGTKP 592
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE
Sbjct: 623 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALAQVYPNLTSEE 674
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT++G V LERVQ+IM +G +ED IFKKR+ E F
Sbjct: 376 GYLTENGYVNLERVQMIMLAVGEVEDSIFKKRKDDEENF 414
>gi|348581480|ref|XP_003476505.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cavia porcellus]
Length = 950
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|73991017|ref|XP_534324.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Canis lupus
familiaris]
Length = 950
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 675
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 428 DQPAFSPGGILTPH 441
>gi|291388948|ref|XP_002710988.1| PREDICTED: 5'-3' exoribonuclease 2 [Oryctolagus cuniculus]
Length = 950
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|83759101|gb|AAI10279.1| XRN2 protein [Bos taurus]
Length = 422
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDN+YLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNMYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAEIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GH++K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RLSVLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKK 637
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ R K KK
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKKKK 422
>gi|432092124|gb|ELK24810.1| 5'-3' exoribonuclease 2 [Myotis davidii]
Length = 925
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR DD D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 490 GMKRKADDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 546
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 547 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADLPSDFEKGTKP 590
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE
Sbjct: 621 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEE 672
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 428 DQPAFTPGGILTPH 441
>gi|300794747|ref|NP_001179401.1| 5'-3' exoribonuclease 2 [Bos taurus]
gi|296481414|tpg|DAA23529.1| TPA: 5'-3' exoribonuclease 2 [Bos taurus]
Length = 951
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 284/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAEIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GH++K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RLSVLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLSVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR DD D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKADDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGK++AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
PSF PGG P
Sbjct: 428 DQPSFSPGGILTPH 441
>gi|351715914|gb|EHB18833.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 950
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE+++A G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAIEKQRVREEIMAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELGDSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|193786052|dbj|BAG50941.1| unnamed protein product [Homo sapiens]
Length = 950
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|18860916|ref|NP_036387.2| 5'-3' exoribonuclease 2 [Homo sapiens]
gi|30173484|sp|Q9H0D6.1|XRN2_HUMAN RecName: Full=5'-3' exoribonuclease 2; AltName: Full=DHM1-like
protein; Short=DHP protein
gi|12053189|emb|CAB66775.1| hypothetical protein [Homo sapiens]
gi|119630591|gb|EAX10186.1| 5'-3' exoribonuclease 2, isoform CRA_a [Homo sapiens]
gi|182888117|gb|AAI60100.1| 5'-3' exoribonuclease 2 [synthetic construct]
Length = 950
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|332238204|ref|XP_003268293.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Nomascus leucogenys]
Length = 950
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|402883351|ref|XP_003905183.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Papio anubis]
gi|355784737|gb|EHH65588.1| 5'-3' exoribonuclease 2 [Macaca fascicularis]
gi|380810654|gb|AFE77202.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|383416591|gb|AFH31509.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
gi|384945858|gb|AFI36534.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 950
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|114681219|ref|XP_514546.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 7 [Pan troglodytes]
gi|397478693|ref|XP_003810674.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Pan paniscus]
gi|410223814|gb|JAA09126.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410252370|gb|JAA14152.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410308366|gb|JAA32783.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
gi|410334533|gb|JAA36213.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 950
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|426391130|ref|XP_004061937.1| PREDICTED: 5'-3' exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 1099
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 194 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 253
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 254 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 313
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 314 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 372
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 373 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 432
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 433 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 492
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 493 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 552
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 553 IDRLVNIYKNVVHKT 567
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 640 GIKRKAEDSDS---EPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 696
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 697 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 740
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 771 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 823
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 569 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 607
>gi|297260411|ref|XP_001094734.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Macaca mulatta]
Length = 951
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
QDS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 QDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 675
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|395851965|ref|XP_003798517.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 951
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+K +E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKSKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAALEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ + VILSDA+VPGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 492 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 548
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 549 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 592
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 623 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 676
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|197100138|ref|NP_001126942.1| 5'-3' exoribonuclease 2 [Pongo abelii]
gi|75040978|sp|Q5R4L5.1|XRN2_PONAB RecName: Full=5'-3' exoribonuclease 2
gi|55733236|emb|CAH93301.1| hypothetical protein [Pongo abelii]
Length = 950
Score = 590 bits (1521), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/375 (75%), Positives = 316/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLLREKKVKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFD D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDADAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|391327300|ref|XP_003738141.1| PREDICTED: 5'-3' exoribonuclease 2 homolog [Metaseiulus
occidentalis]
Length = 960
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/378 (74%), Positives = 329/378 (87%), Gaps = 3/378 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNG-QKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRK+P++IVHCVE++ V+G Q++ D+SKPNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKFPNIIVHCVEERGHTVDGNQRVNIDTSKPNPNNVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE+KPAPK+EDEMMVAIFE IDR+F I+RPR+LLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCCHPENKPAPKNEDEMMVAIFEYIDRIFSIIRPRRLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RASKE AEK A ++R+R +L + G LPPEK HFD+NCITPGTPFM RL+ CLHYYI
Sbjct: 121 RASKEAAEKAATISRLRRELQSKGFHLPPEKAPEDHFDTNCITPGTPFMDRLAKCLHYYI 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
HDRLNNDPGW+ I+VILSDANVPGEGEHKIMD+IRKQRA P HDPNT+HCLCGADADLIM
Sbjct: 181 HDRLNNDPGWQNIEVILSDANVPGEGEHKIMDFIRKQRASPSHDPNTRHCLCGADADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI--TFGSEVE 297
LGLATHEPNFTIIREEFKPNQ RPC++CGQ+GHEMK+C+GL + ++ I G+E E
Sbjct: 241 LGLATHEPNFTIIREEFKPNQPRPCELCGQIGHEMKDCMGLPKDIASQTKIEKPLGAETE 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL+VL+EYL KEL + LPF +S ERA+DDWVF+CFFVGNDFLPHLPSLEIREGA+
Sbjct: 301 FIFIRLNVLKEYLTKELWIEGLPFKWSIERAIDDWVFLCFFVGNDFLPHLPSLEIREGAI 360
Query: 358 DRLVNLYKKTVYKTQEQL 375
DRLV +YK+T++ ++ L
Sbjct: 361 DRLVRIYKETIHVKKDYL 378
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 75/115 (65%), Gaps = 5/115 (4%)
Query: 378 EENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
E GG G+ KR +EE DEVRLWE G+K+RYYESKF+V ++ +FR V
Sbjct: 480 EPEGGAQGQPAKRK-----AEDLDEEPEDEVRLWEVGWKERYYESKFEVSPENQSFRHEV 534
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
Y GLCWVL YYYQGC SWKW+FP+HYAPFASDF I + +FE T+P N
Sbjct: 535 AAAYAEGLCWVLHYYYQGCASWKWFFPYHYAPFASDFSEIGTLKISFEKNTKPFN 589
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF+IDLNGKK AW GVALLPFVDE+RL + +A Y++L+ EE
Sbjct: 618 ESPIIDFYPIDFRIDLNGKKAAWMGVALLPFVDEKRLLETVATVYDRLTPEE 669
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
+LT +G +++ +I+ LG EDEIF++RQ E FK R K+ + R + +++
Sbjct: 377 YLTKNGFAQMDHCAMILTKLGQAEDEIFRQRQIDEEKFKRRQKVGESRCTPLTLSSSG 434
>gi|348518303|ref|XP_003446671.1| PREDICTED: 5'-3' exoribonuclease 2 [Oreochromis niloticus]
Length = 982
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/381 (72%), Positives = 317/381 (83%), Gaps = 5/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHCVE+K +E NG +IP D++KPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E + E +R+RE+++ G LPPE+ K FDSNCITPGT FM L+ CL YY+
Sbjct: 121 ASKEGVELVEEKSRVREEVIQKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAQCLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RL NDPGWK I V LSDA+VPGEGEHKIMD+IR+QR QP+HDPNT HCLCGADADLIML
Sbjct: 180 ERLTNDPGWKNIVVFLSDASVPGEGEHKIMDFIRRQRGQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ RPC +CGQ GHE+K C G+ E + + +E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPRPCGLCGQTGHEIKACQGMPREKQGQHDEFANTMPAAEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYL +EL M +LPFP+ FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQ 377
+DRLV +YK V+KT L Q
Sbjct: 360 IDRLVGIYKDVVHKTGGYLTQ 380
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/109 (60%), Positives = 77/109 (70%), Gaps = 3/109 (2%)
Query: 382 GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
G RGVKR DD D E E D VRLWE+G+K RYY++KFDV D FR V Y
Sbjct: 494 GADSRGVKRKADDSDSEPEPE---DNVRLWEEGWKQRYYKNKFDVDATDEDFRRKVVQSY 550
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I ++ ++FE T+P
Sbjct: 551 VEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKDMFSDFEKNTKP 599
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 43/52 (82%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE
Sbjct: 630 DSPIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTSEE 681
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT +G V LERV++IMQ +G+ ED IFKKR+ + FK RNK K K
Sbjct: 376 GYLTQNGYVNLERVEMIMQAVGVAEDNIFKKRKDDDENFKRRNKEK------RKRMKAQQ 429
Query: 651 KAPSFIPGGQFAPQ 664
+ P+++ GQFAP
Sbjct: 430 QGPAYLTTGQFAPH 443
>gi|71895763|ref|NP_001026204.1| 5'-3' exoribonuclease 2 [Gallus gallus]
gi|75571238|sp|Q5ZIP4.1|XRN2_CHICK RecName: Full=5'-3' exoribonuclease 2
gi|53135140|emb|CAG32399.1| hypothetical protein RCJMB04_24h23 [Gallus gallus]
Length = 949
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/375 (74%), Positives = 317/375 (84%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+K +E NG K D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKASVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E +IR+++LA G ILPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAEEKQKIRQEILAKGGILPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLN+DPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEP+FTIIREEFKPN+ +PC +C QMGHE+K+C GL E + + SE
Sbjct: 240 GLATHEPHFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYLE+EL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
RG+KR +D D E E D +RLWE G+K RYY++KFDV D FR V YV G
Sbjct: 488 ARGIKRKSEDSDSEPEPE---DNIRLWESGWKQRYYKNKFDVDASDEKFRRKVVQSYVEG 544
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
LCWVL+YYYQGC SW WY+PFHYAPFASDF IA++ ++FE G++P
Sbjct: 545 LCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKP 590
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 621 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 673
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ + FK ++ K
Sbjct: 376 GYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKR--------RQKEKKKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
PSFIPGGQF+PQ
Sbjct: 428 DHPSFIPGGQFSPQ 441
>gi|410916005|ref|XP_003971477.1| PREDICTED: 5'-3' exoribonuclease 2-like [Takifugu rubripes]
Length = 992
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/385 (72%), Positives = 321/385 (83%), Gaps = 7/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHCVE+K +E NG +IP D+++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDK APK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKAAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AE + + RIRE+++ G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGAELVEDKKRIREEVIQRGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNN+PGW+ + V LSDA+VPGEGEHKIMD+IR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNNPGWRNVTVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEPNFTIIREEFKPN+ RPC +CGQ+GH++K+C G E E + SE
Sbjct: 240 GLATHEPNFTIIREEFKPNKPRPCALCGQLGHDIKDCQGTAREKQGEHDEFADSMPVSEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYL +EL M +LPFP+ FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLV +YK V+KT L ENG
Sbjct: 360 IDRLVGIYKDVVHKTGGYL--TENG 382
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
RG KR +D D E E D VRLWE+G+K RYY++KFDV D FR V YV GL
Sbjct: 503 RGAKRKAEDSDSEPEPE---DNVRLWEEGWKQRYYKNKFDVDVMDEDFRKKVVQSYVEGL 559
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWVL+YYYQGC SWKWYFPFHYAPFASDF +I + T+FE T+P
Sbjct: 560 CWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFEKDTKP 604
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE
Sbjct: 635 DSSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEE 686
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G VKLERV+LIMQ +G+ ED IFKKR++ + FK R + K K
Sbjct: 376 GYLTENGYVKLERVELIMQAVGVAEDNIFKKRKEDDEGFKRRMREK------KKRMKMEQ 429
Query: 651 KAPSFIPGGQFAPQ 664
+ P+++ GQF P
Sbjct: 430 RGPAYLTTGQFTPH 443
>gi|5881961|gb|AAD55138.1|AF064257_1 Dhm1-like protein [Homo sapiens]
Length = 950
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/375 (74%), Positives = 313/375 (83%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPR KMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A K E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 AIKRGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|1060921|dbj|BAA07524.1| Dhm1 protein [Mus musculus]
Length = 947
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 281/375 (74%), Positives = 313/375 (83%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A K E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 AIKGGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+ DPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNQDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 GLATHEPNFTIIREEFKPNKPKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPFP+ ER+ DDW FMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFLRLNVLREYLERELTMASLPFPFDVERSNDDWEFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G++R +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIRRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKW +PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWLYPFHYAPFASDFEGIADMSSEFEKGTKP 591
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|291242576|ref|XP_002741181.1| PREDICTED: 5-3 exoribonuclease 2-like [Saccoglossus kowalevskii]
Length = 965
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 271/381 (71%), Positives = 313/381 (82%), Gaps = 3/381 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPS++VHCVE+KP+EV+G ++P + ++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKPKEVHGIQVPVNITEPNPNEIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE+KPAPK+EDEMM+AIFECIDRL RIVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPENKPAPKNEDEMMLAIFECIDRLMRIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
KE EK E+ +++E++L+ G LPP K FDSNCITPGT FM RL+ CL YY+
Sbjct: 121 GPKEVREKQVEIDKVKEEILSRGGTLPPPKPVSEKFDSNCITPGTEFMFRLADCLRYYVT 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R+ DPGW +KVILSDANVPGEGEHKIMDYIRKQR PDHDPNT HCLCGADADLIML
Sbjct: 181 ERIMTDPGWSKVKVILSDANVPGEGEHKIMDYIRKQRGSPDHDPNTHHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP---ESVITFGSEVE 297
GLATHEP FTIIREEFKPN R C++CGQ GHEMKEC G E E F E E
Sbjct: 241 GLATHEPYFTIIREEFKPNAPRACELCGQYGHEMKECTGAAKEKEGEFDELTKPFVQEQE 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL++LREYLEKEL M LPF + FERA+DDWVFMCFFVGNDFLPHLPSL+IREGA+
Sbjct: 301 FIFLRLNILREYLEKELFMTGLPFTFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREGAI 360
Query: 358 DRLVNLYKKTVYKTQEQLRQE 378
DRL+ +YK V+KT L ++
Sbjct: 361 DRLIRIYKTAVFKTGGYLTKD 381
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
+RLWEDG+KDRYY+ KFDV ++D F V YV GLCWVL+YYYQGC SWKWYFPFHY
Sbjct: 519 IRLWEDGWKDRYYKLKFDVSENDEQFVQSVVSSYVEGLCWVLRYYYQGCPSWKWYFPFHY 578
Query: 468 APFASDFINIAEVDTNFETGTQP 490
APFA++FI+I ++ +FE GT+P
Sbjct: 579 APFAANFIDIGKLPNDFEKGTKP 601
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 9/67 (13%)
Query: 659 GQFAPQ---------DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYY 709
GQF P+ DSPIIDFYP+DF IDLNGK++AWQGVALLPFVDE+RL +AL Y
Sbjct: 617 GQFLPETWRKLMSDPDSPIIDFYPDDFAIDLNGKRYAWQGVALLPFVDEKRLKEALVGVY 676
Query: 710 EKLSVEE 716
L+ EE
Sbjct: 677 SDLTPEE 683
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT G V LERVQ++M DLG MED IFKKR+ + F RN K+R++R +
Sbjct: 376 GYLTKDGVVNLERVQMMMTDLGEMEDGIFKKRRSDDVRF--RNIQKERKKRNKR-----N 428
Query: 651 KAPSFIPGGQFAPQ 664
APSF+P GQ+APQ
Sbjct: 429 SAPSFVPAGQYAPQ 442
>gi|392884414|gb|AFM91039.1| 5'-3' exoribonuclease 2 [Callorhinchus milii]
Length = 952
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/386 (72%), Positives = 320/386 (82%), Gaps = 8/386 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS++VHC+E++ +EVNG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVVHCLEERVKEVNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE+K APK+EDEMMVAIFE IDRLF I+RPR+LLYMAIDGVAPRAKMNQQR RRFR
Sbjct: 61 PCTHPENKAAPKNEDEMMVAIFEYIDRLFNILRPRRLLYMAIDGVAPRAKMNQQRPRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E +AE R+RE++++ G L E K FD NCITPGT FM L+ L YY+
Sbjct: 121 ASKEGVELLAEKTRMREEVISKGGFLSEEVIK-ERFDGNCITPGTEFMDNLARSLRYYVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+VPGEGEHKIMD+IR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS-----E 295
GLATHEPNFTIIREEFKPNQ RPC +CGQ+GHE+KEC GL + + G+ E
Sbjct: 240 GLATHEPNFTIIREEFKPNQPRPCALCGQIGHEIKECQGLPKDKQGQFDQFAGNSAGVEE 299
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
EFIF+RL+VLREYLE+EL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 300 QEFIFIRLTVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENG 381
A+DRLV +YK V+KT L ENG
Sbjct: 360 AIDRLVGIYKNVVHKTGGYL--TENG 383
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 77/104 (74%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G KR +D DE E+E +D +RLWE+G+K RYY++KFDV D FR V YV GLC
Sbjct: 493 GTKRKNEDSDE---EQEPSDNIRLWEEGWKQRYYKNKFDVDATDAKFRRKVVEAYVEGLC 549
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKW+FPFHYAPFASDF +I E+ T FE GT+P
Sbjct: 550 WVLQYYYQGCASWKWFFPFHYAPFASDFTDIKELPTTFEKGTKP 593
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYP+DF +DLNGKKFAWQGVALLPFVDE RL AL Y L+ +E+
Sbjct: 624 NSSIIDFYPDDFALDLNGKKFAWQGVALLPFVDERRLRGALEKVYPDLTSDET 676
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G V LERVQLIM +G ED IFKKR++ + +F+ R K K +R + +
Sbjct: 377 GYLTENGFVNLERVQLIMIAVGEAEDNIFKKRREDDVLFRQRQKEKNKRLKGNR------ 430
Query: 651 KAPSFIPGGQFAPQ 664
PSFIPGGQ++PQ
Sbjct: 431 --PSFIPGGQYSPQ 442
>gi|324502555|gb|ADY41124.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 934
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 272/372 (73%), Positives = 307/372 (82%), Gaps = 1/372 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV+ VE+KP++V+G IP +++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVNAVEEKPRDVDGNLIPVRTTEPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE++PAPK EDEM IFE IDR+F +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPENRPAPKSEDEMFALIFEYIDRIFAVVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK+ ++A +RE+L +G LPP+KE+G HFDSNCITPGTPFMARL+ L YY+H
Sbjct: 121 ASKEAAEKLQQIAEVRERLEKEGFPLPPKKEEGEHFDSNCITPGTPFMARLADALRYYVH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGW I+VILSDAN PGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIML
Sbjct: 181 MRLNNDPGWANIEVILSDANAPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFGSEVEFI 299
GLATHEPNF IIREEF PNQ RPCD+CGQ GHE+K+C GL + E E FI
Sbjct: 241 GLATHEPNFNIIREEFIPNQQRPCDLCGQYGHEVKDCQGLAQDEAAECDANPMQKETNFI 300
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL VLREYLE+EL M N P+ ERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DR
Sbjct: 301 FVRLPVLREYLERELQMNNSSVPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR 360
Query: 360 LVNLYKKTVYKT 371
L+ LYK V K
Sbjct: 361 LIRLYKDMVAKV 372
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 72/96 (75%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+++S EEE DEVRLWE G+K+RYY SKF+V +DIAFR V YV GLCWVLKYYYQ
Sbjct: 492 MEDSDSEEEVYDEVRLWETGWKERYYRSKFEVDGNDIAFRHKVAWAYVEGLCWVLKYYYQ 551
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GC SW WYFP+HYAPFASDF I++ +F T+P
Sbjct: 552 GCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEP 587
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++SPIIDFYPEDF++DLNGKK+AWQGVALLPFVDE RL + LA Y+KL E E
Sbjct: 617 EESPIIDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRLLETLATVYDKLDDFERE 671
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 9/89 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+ GDV ++RVQ I+ LG +EDEIFK RQQ E F+ RNK K+RRER +
Sbjct: 374 GYLTNQGDVYMDRVQKILNGLGEVEDEIFKNRQQKELQFRERNKAKRRRER-------AA 426
Query: 651 KAPSFIP--GGQFAPQDSPIIDFYPEDFK 677
P++IP G APQ + + F D +
Sbjct: 427 TTPAYIPVRGSLLAPQANGPVSFSGADTR 455
>gi|326914793|ref|XP_003203707.1| PREDICTED: 5'-3' exoribonuclease 2-like [Meleagris gallopavo]
Length = 985
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 278/376 (73%), Positives = 316/376 (84%), Gaps = 6/376 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVE-DKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAFFRWLSRKYPS+IV+ VE ++ +E NG K D+S+PNPN +EFDNLYLDMNGII
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNRVEGERAKECNGVKASVDTSRPNPNEVEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPEDKPAPK+EDEMMVAIFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RASKE E E +IR+++LA G ILPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 RASKEGMEAAEEKQKIRQEILAKGGILPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
DRLN+DPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIM
Sbjct: 180 ADRLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIM 239
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSE 295
LGLATHEPNFTIIREEFKPN+ +PC +C QMGHE+K+C GL E + + SE
Sbjct: 240 LGLATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPASE 299
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
EFIF+RL VLREYLE+EL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREG
Sbjct: 300 QEFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREG 359
Query: 356 AVDRLVNLYKKTVYKT 371
A+DRLVN+YK V+KT
Sbjct: 360 AIDRLVNIYKNVVHKT 375
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
RG+KR +D D E E D +RLWE G+K RYY++KFDV D FR V YV G
Sbjct: 489 ARGIKRKSEDSDSEPEPE---DNIRLWESGWKQRYYKNKFDVDASDEKFRRKVVQSYVEG 545
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
LCWVL+YYYQGC SW WY+PFHYAPFASDF IA++ ++FE G++P
Sbjct: 546 LCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKP 591
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 674
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ + FK ++ K
Sbjct: 377 GYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKR--------RQKEKKKRMKR 428
Query: 651 KAPSFIPGGQFAPQ 664
PSFIPGGQF+PQ
Sbjct: 429 DHPSFIPGGQFSPQ 442
>gi|224047545|ref|XP_002199834.1| PREDICTED: 5'-3' exoribonuclease 2 [Taeniopygia guttata]
Length = 949
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 276/375 (73%), Positives = 314/375 (83%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+K +E NG K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDR+F IVR R+LLYMAID APRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRQRRLLYMAIDXXAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E +IR+++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAEEKQKIRQEILAKGGYLPPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLN++PGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNSNPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHE NFTIIREEFKPN+ +PC +C QMGHE+K+C GL E + + SE
Sbjct: 240 GLATHELNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPVSEQ 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYLE+EL M +LPF + FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 300 EFIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G G+KR +D D E E D +RLWE G+K RYY++KFDV D FR V YV G
Sbjct: 489 GGGIKRKPEDSDSEPEPE---DNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYVEG 545
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
LCWVL+YYYQGC SW WY+PFHYAPFASDF IA++ ++FE G++P
Sbjct: 546 LCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKP 591
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EES
Sbjct: 622 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEES 674
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ + FK ++ K
Sbjct: 376 GYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKR--------RQKEKRKRLKR 427
Query: 651 KAPSFIPGGQFAPQ 664
PSFIPGGQF+PQ
Sbjct: 428 DQPSFIPGGQFSPQ 441
>gi|119630592|gb|EAX10187.1| 5'-3' exoribonuclease 2, isoform CRA_b [Homo sapiens]
Length = 979
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 283/404 (70%), Positives = 316/404 (78%), Gaps = 34/404 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV--------------- 105
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGV
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVYCEILGMLATALAFE 120
Query: 106 --------------APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKE 151
APRAKMNQQRSRRFRASKE E E R+RE++LA G LPPE+
Sbjct: 121 LLAYCQREGGIDKWAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEI 180
Query: 152 KGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMD 211
K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMD
Sbjct: 181 K-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMD 239
Query: 212 YIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMG 271
YIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q G
Sbjct: 240 YIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFG 299
Query: 272 HEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
HE+K+C GL E + S E EFIF+RL+VLREYLE+EL M +LPF + ER
Sbjct: 300 HEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVER 359
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 360 SIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 403
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 520 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 576
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 577 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 620
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 651 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 703
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 405 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 456
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 457 DQPAFTPSGILTPH 470
>gi|312384683|gb|EFR29353.1| hypothetical protein AND_01770 [Anopheles darlingi]
Length = 867
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/344 (79%), Positives = 295/344 (85%), Gaps = 13/344 (3%)
Query: 39 SKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 98
S PNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRL IVRPRK+L
Sbjct: 2 SNPNPNRIEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLMNIVRPRKVL 61
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 158
YMAIDGVAPRAKMNQQRSRRFRASKE AEK EVARIRE+L A G ILPPEKEKGSHFDS
Sbjct: 62 YMAIDGVAPRAKMNQQRSRRFRASKEAAEKATEVARIREELAAKGAILPPEKEKGSHFDS 121
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
NCITPGTPFM RLS CL YYIHDR+NN PGWK +KVILSDANVPGEGEHKIMDYIRKQR
Sbjct: 122 NCITPGTPFMDRLSKCLQYYIHDRMNNYPGWKDLKVILSDANVPGEGEHKIMDYIRKQRV 181
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECV 278
QPD+DPNT H LCGADADLIMLGLATHE +FTIIREEF PN+ RPCD+C Q+GHEMK+C
Sbjct: 182 QPDYDPNTHHVLCGADADLIMLGLATHETHFTIIREEFLPNKDRPCDICQQIGHEMKDCS 241
Query: 279 GLDAE-------PNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDD 331
GL +E P P G E +FIFVRL+VL+EYL+KEL MPNLPF Y FER +DD
Sbjct: 242 GLQSERDMIKTPPGP------GKETQFIFVRLNVLKEYLQKELDMPNLPFAYDFERVIDD 295
Query: 332 WVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQL 375
WVFMCFFVGNDFLPHLPSLEIRE A+DRL+ LYKK VYKT+ L
Sbjct: 296 WVFMCFFVGNDFLPHLPSLEIRENAIDRLITLYKKCVYKTRGYL 339
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/115 (60%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 378 EENGGGGGRGVKRSFDD----VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAF 433
E GG R +KR ++ V EE+E+ DEVRLWEDGFKDRYYESKFDV +I F
Sbjct: 446 EATEGGKPRDMKRKAEEPLSVVVAEEEEKETPDEVRLWEDGFKDRYYESKFDVSPQNIKF 505
Query: 434 RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
R V EYV GLCWVL+YYYQGC SW+WYFP+HYAPFASDF ++ V+T+F+ GT
Sbjct: 506 RQTVAWEYVRGLCWVLRYYYQGCASWEWYFPYHYAPFASDFKHLENVNTHFDRGT 560
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 41/51 (80%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF IDLNGKKFAWQGVALLPFVDE+RL +A P L+ EE
Sbjct: 593 SPIIDFYPIDFHIDLNGKKFAWQGVALLPFVDEKRLFRATDPKVPLLTQEE 643
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNK-MKKRRERQMKMAAQS 649
G+LTDSG V L+RV++IM DLG EDEIF++R+ +E FK RNK M+ +++RQ + Q
Sbjct: 337 GYLTDSGSVVLDRVEMIMTDLGFAEDEIFRQRKVSEDRFKERNKRMRLQKDRQQRPNFQH 396
Query: 650 TKAPSFIP 657
F P
Sbjct: 397 INNSQFAP 404
>gi|195577157|ref|XP_002078439.1| GD23438 [Drosophila simulans]
gi|194190448|gb|EDX04024.1| GD23438 [Drosophila simulans]
Length = 842
Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/325 (83%), Positives = 289/325 (88%), Gaps = 4/325 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFECIDRLF IVRPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFECIDRLFGIVRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+KET EK EVARIRE+LL+ GC LPPEKEKG HFDSNCITPGTPFM RLS C
Sbjct: 61 RSRRFRAAKETTEKRLEVARIREELLSRGCKLPPEKEKGDHFDSNCITPGTPFMDRLSKC 120
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
LHY++HDRLNN+P WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGAD
Sbjct: 121 LHYFVHDRLNNNPAWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGAD 180
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA----EPNPESVI 290
ADLIMLGLATHEPNFTIIREEF PN+ RPCD+C GHEM +CVGL A N + +
Sbjct: 181 ADLIMLGLATHEPNFTIIREEFLPNKPRPCDICNGFGHEMDKCVGLGATAPTSANFKPDV 240
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
G+EV+FIFVRLSVLREYL++ L MPNLPF YSFERALDDWVFMCFFVGNDFLPHLPSL
Sbjct: 241 PIGAEVKFIFVRLSVLREYLKQTLEMPNLPFEYSFERALDDWVFMCFFVGNDFLPHLPSL 300
Query: 351 EIREGAVDRLVNLYKKTVYKTQEQL 375
EIREGAVDRLV LYKK VYKT+ L
Sbjct: 301 EIREGAVDRLVELYKKCVYKTKGYL 325
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDGFKDRYYESKFDV + FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 433 VRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHY 492
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 493 APFASDFVNIQGLSTMFEKGTKPFN 517
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 11/97 (11%)
Query: 623 QQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQF-APQDSPIIDFYPEDFKID 679
Q TMF+ K E+ M + AA S+ P P + + +SPIIDFYPEDFKID
Sbjct: 503 QGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAKLMSDPESPIIDFYPEDFKID 560
Query: 680 LNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
LNG+ +ALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 561 LNGR------MALLPFVDEKRLFKALVPYYDQLTGEE 591
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSGDV L+RVQLIM DLG ED+IFK RQ+ E FK R+K +KR+ER + +
Sbjct: 323 GYLTDSGDVNLDRVQLIMTDLGNAEDQIFKSRQRREEQFKARDKARKRQERNQDHGSLNQ 382
Query: 651 KA 652
A
Sbjct: 383 SA 384
>gi|339249025|ref|XP_003373500.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
gi|316970366|gb|EFV54322.1| 5'-3' exoribonuclease 2 [Trichinella spiralis]
Length = 820
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/419 (65%), Positives = 323/419 (77%), Gaps = 11/419 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS++++C+ED P++V+G +P D+++PNP+G+EFD YLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIVMNCIEDTPRDVDGTTVPVDNTQPNPHGIEFDTFYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDKPAPK E+EMMVAIFE IDRL IVRPR+LLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCCHPEDKPAPKSEEEMMVAIFEYIDRLMCIVRPRRLLYMAIDGVAPRAKMNQQRTRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK ++ +IRE L A G LP E HFDSNCITPGTPFMARL+ CL YYIH
Sbjct: 121 ASKEAAEKEEQIRQIREDLRAQGIPLPAESTDKQHFDSNCITPGTPFMARLAICLRYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN DP W+ + VILSDA+VPGEGEHKIMDYIR QRA HDPNT H LCGADADLIML
Sbjct: 181 ERLNTDPAWQNLLVILSDASVPGEGEHKIMDYIRHQRACASHDPNTHHVLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLD--AEPNPESVITFGSEVEF 298
GLATHEPNFTIIREEF PN RPC++C GH M++C GL N E+ + +F
Sbjct: 241 GLATHEPNFTIIREEFVPNLPRPCEICNNYGHTMQDCQGLSILENENEEAHRPVLKKTQF 300
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
IF+RLSVLREYL++EL MPN+ F Y FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+D
Sbjct: 301 IFIRLSVLREYLQRELEMPNIKFKYDFERCVDDWVFMCFFVGNDFLPHLPSLEIREGAID 360
Query: 359 RLVNLYKKTVYKTQEQLRQEENGGGGGRGVK-------RSFDDVDESSEEEESNDEVRL 410
RLV LYK VY+T L ENG + V+ + D++ +E E+ D + L
Sbjct: 361 RLVKLYKDCVYRTGGYL--TENGFVNLKRVQLIMSELGKVEDEIFRQRQEREAMDNIFL 417
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVD--ESSEEEESNDEVRLWEDGFKDRYYESKFDVP 427
+T ++RQ KR F+ E + +E DEVRLWE G+KDRYY KF
Sbjct: 465 RTAMEMRQA--AMAVTSSTKREFNGAANAEDANDEGPLDEVRLWECGWKDRYYLVKFQCS 522
Query: 428 KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
D+ FR V + YV GLCWVL+YYYQGC SWKWYFPFHY+PFASDF+NI ++ +F
Sbjct: 523 PKDLEFRHHVANCYVEGLCWVLRYYYQGCCSWKWYFPFHYSPFASDFLNIGDLKIDFSEK 582
Query: 488 TQPV 491
T P+
Sbjct: 583 TMPI 586
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IID YP DFK+DLNGK++AWQGV LLPFVD ERL++AL Y L+ EE
Sbjct: 620 STIIDMYPSDFKVDLNGKRYAWQGVVLLPFVDAERLNEALEVVYPDLTEEE 670
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 13/81 (16%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETM--------FKMRNKMKKRRERQ 642
G+LT++G V L+RVQLIM +LG +EDEIF++RQ+ E M + NK K RR
Sbjct: 375 GYLTENGFVNLKRVQLIMSELGKVEDEIFRQRQEREAMDNIFLLDWIQFSNKAKMRR--- 431
Query: 643 MKMAAQSTKAPSFIPGGQFAP 663
M A++ AP+FIP FAP
Sbjct: 432 --MQAENFDAPAFIPQNAFAP 450
>gi|33337899|gb|AAQ13577.1|AF152169_1 DHP protein [Homo sapiens]
Length = 950
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/375 (73%), Positives = 308/375 (82%), Gaps = 5/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRK PS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKCPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPR KMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRVKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
PNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 240 AFPHMNPNFTIIREEFKPNRPKPCGLCNQFGHEVKDCEGLSREKKGKHDELADSLPCAEG 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREY+E+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 300 EFIFLRLNVLREYVERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 359
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 360 IDRLVNIYKNVVHKT 374
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 491 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 547
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 548 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 591
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 622 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 674
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 376 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 427
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 428 DQPAFTPSGILTPH 441
>gi|170593371|ref|XP_001901438.1| 5'-3' exoribonuclease 2 [Brugia malayi]
gi|158591505|gb|EDP30118.1| 5'-3' exoribonuclease 2, putative [Brugia malayi]
Length = 937
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 268/376 (71%), Positives = 307/376 (81%), Gaps = 2/376 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+RKYPSV+V VE+KP+++NG ++P ++ PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+P PK E+EM + IFE IDRLF IVRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE EK+ ++A R +L ++G LPPEK K HFDSNCITPGTPFMARL+ L YY+H
Sbjct: 121 ASKEAIEKVEQIAETRLRLESEGYPLPPEK-KTEHFDSNCITPGTPFMARLAVALRYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN+DPGW+ I VILSDANVPGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIML
Sbjct: 180 QRLNSDPGWRKIAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT-FGSEVEFI 299
GLATHEPNF IIREEF PNQ RPCD+CGQ GH + +C GL ++ N E T E FI
Sbjct: 240 GLATHEPNFNIIREEFVPNQQRPCDLCGQYGHGLNDCKGLASDDNSECQSTPLQKETNFI 299
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
F+RL VLREYLE+EL +PN P+ ERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DR
Sbjct: 300 FIRLPVLREYLERELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR 359
Query: 360 LVNLYKKTVYKTQEQL 375
LV LYK V + + L
Sbjct: 360 LVKLYKDMVCEMKGHL 375
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 69/95 (72%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
+ SS E+E DEVRLWEDG+KDRYY+SKF V DI FR V YV GLCWVL YYYQG
Sbjct: 500 NNSSSEDEVFDEVRLWEDGWKDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQG 559
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
C SW WY+PFHYAPFASDF +++ +F T+P
Sbjct: 560 CASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEP 594
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP++F IDLNGKK AWQGVALLPFVDE+RL + L P +KL E E
Sbjct: 626 SPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLNPMEDKLDAFEKE 678
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 581 KLFSRMLT-YPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G LTDSG V +ER Q+I+ LG +EDEIFK RQ+ E FK RNK KK R
Sbjct: 362 KLYKDMVCEMKGHLTDSGIVHIERAQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWR 421
Query: 640 ERQMKMAAQSTKAPSFIP--GGQFAPQ 664
E Q+ PS+IP G +PQ
Sbjct: 422 E-------QALATPSYIPSRGSLLSPQ 441
>gi|340375702|ref|XP_003386373.1| PREDICTED: 5'-3' exoribonuclease 2-like [Amphimedon queenslandica]
Length = 1066
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 265/385 (68%), Positives = 314/385 (81%), Gaps = 6/385 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYPS++VHCVE+K +++ G +P D++ PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPSIVVHCVEEKRKKLQGIDVPIDATLPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPEDKPAP+ EDEMMVAIFE IDR+F IVRPR+L+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEDKPAPETEDEMMVAIFEYIDRIFNIVRPRRLVYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++KE+ +K+ E+ ++R++L G LPP K +HFDSNCITPGT FMA L+ CL YYIH
Sbjct: 121 SAKESVDKLEEIKKVRQELAERGVGLPPLKPDSAHFDSNCITPGTQFMANLAICLQYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+N++P WKG+KVILSDANVPGEGEHKIMDYIRKQRA HDPNT HCL GADADLIML
Sbjct: 181 DRMNHNPAWKGLKVILSDANVPGEGEHKIMDYIRKQRASVGHDPNTHHCLYGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEV 296
GLATHEP FTI+RE+FKPNQ RPC++C Q GH M EC G E E + E
Sbjct: 241 GLATHEPYFTILREDFKPNQPRPCEICNQYGHSMTECTGEAREKKGEFDELATANIAMEK 300
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+R++VLREYL++EL + L F + FERA+DDWVFMCFFVGNDFLPHLPSL+IREGA
Sbjct: 301 EFIFIRINVLREYLQRELRIDGLDFKFDFERAIDDWVFMCFFVGNDFLPHLPSLQIREGA 360
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRL+NLYKK + T+ L ENG
Sbjct: 361 IDRLINLYKKFLPSTKSYL--TENG 383
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 90/165 (54%), Gaps = 27/165 (16%)
Query: 349 SLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGV-----------KRSFDDV-- 395
SL + A + +L KK+ + GGG R + KRSF D
Sbjct: 478 SLTSNKEAAKSMKSLLKKSKSFDDTGSSASQEGGGVRRSLTSEEERPRNTLKRSFSDARR 537
Query: 396 ----------DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
D SEE DEVRLWEDG+K+RYY+SKF V +DI F V Y GL
Sbjct: 538 ANSGGRGHGEDSGSEE----DEVRLWEDGWKERYYQSKFCVSSNDIDFVRQVVESYSEGL 593
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
CWV+ YYYQGC SWKWY+PFHYAPFASDF I +V FETG++P
Sbjct: 594 CWVMSYYYQGCPSWKWYYPFHYAPFASDFRYIRDVRDRFETGSKP 638
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 43/53 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYP +FKIDLNGKKFAWQGVALLPFVDE RLH+AL P Y L E+
Sbjct: 669 DSSIIDFYPTNFKIDLNGKKFAWQGVALLPFVDECRLHEALEPLYHMLDPLET 721
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
+LT++G V ++ VQLI+ +LG +EDEIF +R+ + K R K K+RR + K
Sbjct: 378 YLTENGFVDVKNVQLILFELGKVEDEIFIRRRDQDIRNKERQKFKRRR-------IEDYK 430
Query: 652 APSFIPGGQFAP 663
AP FIP Q AP
Sbjct: 431 APQFIP-EQLAP 441
>gi|212645622|ref|NP_496958.2| Protein XRN-2 [Caenorhabditis elegans]
gi|218511968|sp|Q9U299.2|XRN2_CAEEL RecName: Full=5'-3' exoribonuclease 2 homolog
gi|189309813|emb|CAB54449.2| Protein XRN-2 [Caenorhabditis elegans]
Length = 975
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 263/385 (68%), Positives = 312/385 (81%), Gaps = 12/385 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL++KYP+ +V+ ED+ ++ +G ++P D ++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRDQDGNRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAPK+EDEM IFE IDR++ IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK A + R +L+A+G +PP+K++ +HFDSNCITPGTPFMARL+ L YYIH
Sbjct: 121 ASKEMAEKEASIEEQRNRLMAEGIAVPPKKKEEAHFDSNCITPGTPFMARLADALRYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+ ND W I++ILSDANVPGEGEHKIMDY+RKQR P HDPNT HCLCGADADLIML
Sbjct: 181 DRVTNDASWANIEIILSDANVPGEGEHKIMDYVRKQRGNPAHDPNTVHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN-------PESVITFG 293
G+ATHE NF IIREEF PNQ R CD+CGQ GHE+KEC G + E + PE
Sbjct: 241 GIATHEANFNIIREEFVPNQPRACDLCGQYGHELKECRGAENETDLGDDYCKPEQ----- 295
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
E FIF+R+ VLREYLEKEL+MPNLPF + ERALDDWVF+CFFVGNDFLPHLPSLEIR
Sbjct: 296 REKNFIFLRIPVLREYLEKELSMPNLPFKFDVERALDDWVFLCFFVGNDFLPHLPSLEIR 355
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQE 378
EGA+DRL+ LYK+ VY+ + L ++
Sbjct: 356 EGAIDRLIKLYKEMVYQMKGYLTKD 380
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/96 (59%), Positives = 68/96 (70%)
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
E E+E D++RL+E G+KDRYY +KFDV DDI FR V YV GLCWVL+YYYQGC
Sbjct: 524 EEEEDEGPKDDIRLYESGWKDRYYRAKFDVGSDDIEFRHRVAWAYVEGLCWVLRYYYQGC 583
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
SW WYFP+HYAPFASDF + E +F T+P N
Sbjct: 584 ASWDWYFPYHYAPFASDFETVGEFQPDFTRPTKPFN 619
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 41/54 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIID YP DF+IDLNGKK+AWQGVALLPFVDE RL L Y L+ EE +
Sbjct: 648 DSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDETRLLATLQSVYPTLTAEEKQ 701
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 16/101 (15%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G+LT G +L+RV++IM+ LG +EDEIFK+RQQ E F+ + KK R
Sbjct: 364 KLYKEMVYQMKGYLTKDGIPELDRVEMIMKGLGRVEDEIFKRRQQDEERFQENQRNKKAR 423
Query: 640 ERQMKM-----------AAQSTKAPSFIPG-GQFAPQDSPI 668
M+M + P+F+P G AP +P+
Sbjct: 424 ---MQMYGGGGRGGRGRGRGRGQQPAFVPTHGILAPMAAPM 461
>gi|259016407|sp|Q60SG7.2|XRN2_CAEBR RecName: Full=5'-3' exoribonuclease 2 homolog
Length = 976
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 265/382 (69%), Positives = 312/382 (81%), Gaps = 4/382 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL++KYP+ +V+ ED+ + V+G+++P D ++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRGVDGRRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+PAPK+EDEM IFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPAPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEK--EKGSHFDSNCITPGTPFMARLSACLHYY 178
ASKE AEK A + R +L+A+G +P +K E+ +HFDSNCITPGTPFMARL+ L YY
Sbjct: 121 ASKEMAEKAASIEEQRRRLIAEGIAVPQKKKDEEEAHFDSNCITPGTPFMARLADALRYY 180
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHDR+ NDP W I++ILSDANVPGEGEHKIMDYIRKQR P HDPNT HCLCGADADLI
Sbjct: 181 IHDRVTNDPAWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLI 240
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL--DAEPNPESVITFGSEV 296
MLG+ATHE NF IIREEF PNQ R C++CGQ GHE+KEC G D + E E
Sbjct: 241 MLGIATHEANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDEYCKPEQREK 300
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
FIF+R+ VLREYLEKE+AMPNLPF ++ ERALDDWVF+CFFVGNDFLPHLPSLEIREGA
Sbjct: 301 NFIFLRIPVLREYLEKEMAMPNLPFQFNLERALDDWVFLCFFVGNDFLPHLPSLEIREGA 360
Query: 357 VDRLVNLYKKTVYKTQEQLRQE 378
+DRL+ LYK+ VY+ + L ++
Sbjct: 361 IDRLIKLYKEMVYEMKGYLTKD 382
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 69/95 (72%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ E+EE D++RL+E G+K+RYY +KFDV DD+ FR V YV GLCWVL+YYYQGC
Sbjct: 526 TDEDEEPKDDIRLYESGWKERYYRAKFDVGSDDVDFRHRVAWAYVEGLCWVLRYYYQGCS 585
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
SW WYFP+HYAPFASDF + E +F T+P N
Sbjct: 586 SWDWYFPYHYAPFASDFETVGEFKPDFTRPTKPFN 620
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIID YP DF+IDLNGKK+AWQGVALLPFVDE+RL + L Y L+ EE
Sbjct: 649 ESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKSVYPTLTDEE 700
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G+LT G +L+RV++IM+ LG +EDEIFK+RQQ E FK K KK R
Sbjct: 366 KLYKEMVYEMKGYLTKDGIPELDRVEMIMRGLGKVEDEIFKRRQQDEERFKENQKNKKAR 425
Query: 640 ERQ----MKMAAQSTKAPSFIPG-GQFAPQDSPI 668
+Q + P+++P G AP +P+
Sbjct: 426 MQQYGRGRGGRGRGRGQPAYVPSHGILAPMSAPM 459
>gi|308503096|ref|XP_003113732.1| CRE-XRN-2 protein [Caenorhabditis remanei]
gi|308263691|gb|EFP07644.1| CRE-XRN-2 protein [Caenorhabditis remanei]
Length = 988
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/380 (68%), Positives = 309/380 (81%), Gaps = 2/380 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL++KYP+ +V+ ED+ ++ +G+++P D ++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATVVNANEDRQRDADGKRVPVDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+P PK+EDEM IFE IDR++ IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPPPKNEDEMFALIFEYIDRIYSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK A + R +L+A+G +PP K++ +HFDSNCITPGTPFMARL+ L YYIH
Sbjct: 121 ASKEMAEKAASIEEQRNRLMAEGIAVPPPKKEEAHFDSNCITPGTPFMARLADALRYYIH 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+ ND W I++ILSDANVPGEGEHKIMDYIRKQR P HDPNT HCLCGADADLIML
Sbjct: 181 DRVTNDASWANIEIILSDANVPGEGEHKIMDYIRKQRGNPAHDPNTVHCLCGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL--DAEPNPESVITFGSEVEF 298
G+ATHE NF IIREEF PNQ R C++CGQ GHE+KEC G D + + E F
Sbjct: 241 GIATHEANFNIIREEFVPNQPRACELCGQYGHELKECRGAENDTDLGDDYCKPEQREKNF 300
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
IF+R+ VLREYLEKE+AMPNLPF + ERALDDWVF+CFFVGNDFLPHLPSLEIREGA+D
Sbjct: 301 IFLRIPVLREYLEKEMAMPNLPFKFDLERALDDWVFLCFFVGNDFLPHLPSLEIREGAID 360
Query: 359 RLVNLYKKTVYKTQEQLRQE 378
RL+ LYK+ VY+ + L ++
Sbjct: 361 RLIKLYKEMVYEMRGYLTKD 380
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 68/93 (73%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+EE D++RL+E G+KDRYY +KFDV DD+ FR V YV GLCWVL+YYYQGC SW
Sbjct: 527 EDEEPKDDIRLFESGWKDRYYRAKFDVGSDDVDFRHRVAWAYVEGLCWVLRYYYQGCSSW 586
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
WYFP+HYAPFASDF + E +F T+P N
Sbjct: 587 DWYFPYHYAPFASDFETVGEFKPDFTKPTKPFN 619
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIID YP DF+IDLNGKK+AWQGVALLPFVDE+RL L Y L+ EE +
Sbjct: 648 DSPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLATLKSVYPTLTDEEKQ 701
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G+LT G +L+RV++IM+ LG +EDEIFK+RQQ E FK K KK R
Sbjct: 364 KLYKEMVYEMRGYLTKDGIPELDRVEMIMKGLGKVEDEIFKRRQQDEERFKENQKNKKAR 423
Query: 640 ERQ-----MKMAAQSTKAPSFIPG-GQFAPQDSPI 668
Q + + P+++P G AP +P+
Sbjct: 424 MDQYGRGRGRGRGRGRGQPAYVPTFGILAPMSAPM 458
>gi|198426685|ref|XP_002129696.1| PREDICTED: similar to 5-3 exoribonuclease 2 [Ciona intestinalis]
Length = 886
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/374 (69%), Positives = 305/374 (81%), Gaps = 3/374 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKY S+++HC E+K +E++G IP D+S PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYSSIVIHCNEEKAKEIDGVTIPVDTSLPNPNDIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+PAPK+E E+M+AIF+ IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPKNEQEIMIAIFDSIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E+ A IR +LL +G LP K FDSNCITPGT FM RL+ACL +YI
Sbjct: 121 ASKEGVEQTELKASIRAELLRNGMRLPEVDPKAERFDSNCITPGTEFMFRLAACLRFYII 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ I+VILSDANVPGEGEHKIMD+IRKQR QPDHDPNT HC+CGADADLIML
Sbjct: 181 DRLNNDPGWRNIEVILSDANVPGEGEHKIMDFIRKQRGQPDHDPNTHHCICGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG---SEVE 297
GLATHEPNFTIIREEFKPNQ RPC +C Q GHEM +C GL + + E + +
Sbjct: 241 GLATHEPNFTIIREEFKPNQPRPCGICAQYGHEMTDCCGLPRDQSDELNVVQSQPHAGTN 300
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+IF+R+ V+REY++ E+ MP LPF Y FE +DDWV MCFFVGNDFLPHLPSLEIREGA+
Sbjct: 301 YIFIRICVIREYIKLEMEMPGLPFKYDFENIIDDWVMMCFFVGNDFLPHLPSLEIREGAI 360
Query: 358 DRLVNLYKKTVYKT 371
D+LV LYK V++T
Sbjct: 361 DKLVRLYKDIVHQT 374
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDG+K+RY+ +KF+V D FR + YV GLCWVL YYYQGC SWKW+FPFHY
Sbjct: 512 VRLWEDGWKERYFRAKFNVSMKDFEFRRTLVRCYVEGLCWVLLYYYQGCASWKWFFPFHY 571
Query: 468 APFASDFINIAEVDTNFETGTQP 490
APFASDF +I+++ F T TQP
Sbjct: 572 APFASDFFDISDLPNEFPTNTQP 594
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%), Gaps = 9/69 (13%)
Query: 659 GQFAPQ---------DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYY 709
GQF P +SPIIDFYPEDFKIDLNGKK+AWQGVALLPFVDE+R+ +L Y
Sbjct: 610 GQFLPTTWRKLMGDPESPIIDFYPEDFKIDLNGKKYAWQGVALLPFVDEDRMMSSLTRVY 669
Query: 710 EKLSVEESE 718
+ L+ +E +
Sbjct: 670 DDLTPQEEK 678
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 7/73 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT +G V L RV+ IM +G +EDEIF+KR++++ ++ R K K++R ++
Sbjct: 376 GYLTCNGKVNLSRVEKIMMGIGKLEDEIFRKRRESDVNYRAREKAKRQRTKR-------D 428
Query: 651 KAPSFIPGGQFAP 663
+ PS+IPG QFAP
Sbjct: 429 QGPSYIPGSQFAP 441
>gi|47214629|emb|CAG01470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 836
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/385 (70%), Positives = 305/385 (79%), Gaps = 31/385 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IVHCVE+K +E NG +IP D+++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVHCVEEKGKECNGVRIPVDTTRPNPNEVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AE + E RIRE+ GT FM L+ CL YYI
Sbjct: 121 ASKEGAELVEEKKRIREE-------------------------GTEFMDNLAKCLRYYIA 155
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ I V LSDA+VPGEGEHKIMD+IR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 156 DRLNNDPGWRNITVFLSDASVPGEGEHKIMDFIRRQRAQPNHDPNTHHCLCGADADLIML 215
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ RPC +CGQ+GHE+K+C G E E S E
Sbjct: 216 GLATHEPNFTIIREEFKPNKPRPCALCGQLGHEIKDCQGTAREKKGEHDEFADSMPVAEQ 275
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL VLREYL +EL M +LPFP+ FER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 276 EFIFIRLCVLREYLARELTMASLPFPFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGA 335
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENG 381
+DRLVN+YK V+KT L ENG
Sbjct: 336 IDRLVNIYKDVVHKTGGYL--TENG 358
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 76/111 (68%), Gaps = 3/111 (2%)
Query: 380 NGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGH 439
+ G RG KR +D D E E D VRLWE+G+K RYY++KFDV D FR V
Sbjct: 471 SSGPESRGAKRKAEDSDSEPEPE---DNVRLWEEGWKQRYYKNKFDVDVMDEDFRRKVVQ 527
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I + + FE GT+P
Sbjct: 528 SYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFSEFEKGTKP 578
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL ALA Y L+ EE +
Sbjct: 609 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALADVYPDLTPEEEK 662
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT++G VKLERV++IMQ +G+ ED IFKKR++ E FK R + + K
Sbjct: 352 GYLTENGYVKLERVEMIMQAVGVAEDNIFKKRKEDEVRFKRRMRE------KKKRMKMEQ 405
Query: 651 KAPSFIPGGQFAPQ 664
+ P+++ GQF P
Sbjct: 406 RGPAYLTTGQFTPH 419
>gi|341884867|gb|EGT40802.1| hypothetical protein CAEBREN_29959 [Caenorhabditis brenneri]
Length = 992
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/405 (65%), Positives = 308/405 (76%), Gaps = 27/405 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL++KYP+ IV+ ED+ + +G++ P D ++PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTKKYPATIVNANEDRQRLDDGRRAPIDCTQPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+P PK+EDEM IFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPPPKNEDEMFALIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK A + R +L+A+G +PP+KE+ +HFDSNCITPGTPFMARL+ L YYIH
Sbjct: 121 ASKEMAEKAASIEEQRRRLMAEGIAVPPKKEEEAHFDSNCITPGTPFMARLADALRYYIH 180
Query: 181 DRLNNDPGWKGI-------------------------KVILSDANVPGEGEHKIMDYIRK 215
DR+ ND W I ++ILSDANVPGEGEHKIMDYIRK
Sbjct: 181 DRITNDAAWANIEFIPRIPRNYHQSYPEFSKFIEINFQIILSDANVPGEGEHKIMDYIRK 240
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
QR P HDPNT HCLCGADADLIMLG+ATHE NF IIREEF PNQ R CD+CGQ GHE+K
Sbjct: 241 QRGNPAHDPNTVHCLCGADADLIMLGIATHEANFNIIREEFVPNQPRACDLCGQYGHELK 300
Query: 276 ECVGL--DAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWV 333
EC G D + + E FIF+R+ VLREYLEKE+AMPNLPF + ERALDDWV
Sbjct: 301 ECRGAENDTDLGDDYCKPEQREKNFIFLRIPVLREYLEKEMAMPNLPFQFDLERALDDWV 360
Query: 334 FMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
F+CFFVGNDFLPHLPSLEIREGA+DRL+ LYK+ VY+ + L ++
Sbjct: 361 FLCFFVGNDFLPHLPSLEIREGAIDRLIKLYKEMVYEMKGYLTKD 405
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 62/85 (72%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
+RL+E G+KDRYY +KFDV DD+ FR V YV GLCWVL+YYYQGC SW WYFP+HY
Sbjct: 555 IRLFESGWKDRYYRAKFDVGSDDVEFRHRVAWAYVEGLCWVLRYYYQGCSSWDWYFPYHY 614
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF + + +F T+P N
Sbjct: 615 APFASDFETVGDFKPDFSRPTKPFN 639
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIID YP DF+IDLNGKK+AWQGVALLPFVDE+RL + L Y L+ EE
Sbjct: 668 ESPIIDLYPADFRIDLNGKKYAWQGVALLPFVDEQRLLETLKTVYPTLTDEE 719
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G+LT G +L+RV++IM+ LG +EDEIFK+RQQ E FK K KK R
Sbjct: 389 KLYKEMVYEMKGYLTKDGIPELDRVEMIMKGLGKVEDEIFKRRQQDEERFKESQKHKKAR 448
Query: 640 ERQMKMAAQSTKA----PSFIPG-GQFAPQDSPI 668
+Q + P+++P G AP +P+
Sbjct: 449 MQQFGGRGRGRGRGRGQPAYVPNHGILAPMSAPM 482
>gi|354468134|ref|XP_003496522.1| PREDICTED: 5'-3' exoribonuclease 2-like [Cricetulus griseus]
Length = 1045
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/355 (74%), Positives = 295/355 (83%), Gaps = 5/355 (1%)
Query: 21 CVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVA 80
C +P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVA
Sbjct: 95 CGVVRPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVA 154
Query: 81 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLL 140
IFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++L
Sbjct: 155 IFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEIL 214
Query: 141 ADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDAN 200
A G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+
Sbjct: 215 AKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDAS 273
Query: 201 VPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+
Sbjct: 274 APGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNK 333
Query: 261 ARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAM 316
+PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+EL M
Sbjct: 334 PKPCALCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLNVLREYLERELTM 393
Query: 317 PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+LPFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 394 ASLPFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 448
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 75/109 (68%), Gaps = 3/109 (2%)
Query: 382 GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
G G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V Y
Sbjct: 558 GSPSPGIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSY 614
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V GLCWVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 615 VEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 663
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 43/54 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
QDS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 716 QDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 769
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 450 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 501
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 502 DQPAFTPSGILTPH 515
>gi|256074378|ref|XP_002573502.1| 5'-3' exoribonuclease [Schistosoma mansoni]
gi|350644806|emb|CCD60472.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 928
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 258/377 (68%), Positives = 305/377 (80%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQ--EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAFFRWLS KYPS++ HCVE + + +G + P D+S+PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVTHCVEKRGSILDDDGNRSPVDTSEPNPNGEEFDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCTHPE+KPAPK E EM AIFE IDRLF IVRPR++LYMAIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCTHPENKPAPKTESEMFAAIFEYIDRLFSIVRPRRVLYMAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA++E EK + R+R +L+A G LPP KE+ HFDSNCITPGTPFM+RL+ L Y
Sbjct: 121 FRAAQEAKEKQITIERLRNELIARGAHLPPPKEE--HFDSNCITPGTPFMSRLAVALRGY 178
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ RL DPGWK + V LSDANVPGEGEHKIMD+IR+QR P HD NT+HCLCGADADLI
Sbjct: 179 IYTRLTKDPGWKNLMVFLSDANVPGEGEHKIMDFIRRQRNNPTHDANTKHCLCGADADLI 238
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL----DAEPNPESVITFGS 294
MLGLATHEP FTIIREEFKPNQ +PCD+CGQMGHEM++CVG D+ P + +
Sbjct: 239 MLGLATHEPYFTIIREEFKPNQPKPCDLCGQMGHEMEDCVGAPKEEDSNEGPPPLPS--G 296
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+V+FIF+RL+VLR+YL ++L + + F + ER +DDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 297 DVDFIFIRLNVLRQYLAEDLKLAGITFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIRE 356
Query: 355 GAVDRLVNLYKKTVYKT 371
GA+DRL+++YK TV KT
Sbjct: 357 GAIDRLIDIYKSTVQKT 373
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
D+ E ++ DEVR WEDG++ RYY+SKF V P D F + VG EY LGLCWVL YYYQ
Sbjct: 472 DDEDEMMDAADEVRFWEDGWRSRYYQSKFGVDPTDAPGFCIKVGQEYALGLCWVLAYYYQ 531
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
GC SW WYFP+HYAPFASDF I+E+D +F
Sbjct: 532 GCASWDWYFPYHYAPFASDFSKISELDVDF 561
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 41/54 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIIDFYP DFKIDLNGK++ W GVALLPFVDE RL KAL L+ EE E
Sbjct: 599 DSPIIDFYPTDFKIDLNGKRYLWMGVALLPFVDEVRLLKALDARRNLLTKEEVE 652
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 35/44 (79%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNK 634
G+LTDSG V LERVQLIM DLG MEDEIFK R+++E F+ R +
Sbjct: 375 GWLTDSGRVNLERVQLIMVDLGKMEDEIFKNRRESELQFRNRKR 418
>gi|417413149|gb|JAA52920.1| Putative 5'-3' exonuclease xrn1/kem1/sep1 involved in dna strand
exchange and mrna turnover, partial [Desmodus rotundus]
Length = 926
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 262/351 (74%), Positives = 295/351 (84%), Gaps = 5/351 (1%)
Query: 25 KPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 84
+P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE
Sbjct: 1 QPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEY 60
Query: 85 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGC 144
IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++LA G
Sbjct: 61 IDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGG 120
Query: 145 ILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGE 204
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGE
Sbjct: 121 FLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGE 179
Query: 205 GEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPC 264
GEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC
Sbjct: 180 GEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPC 239
Query: 265 DVCGQMGHEMKECVGLDAE---PNPESVITFG-SEVEFIFVRLSVLREYLEKELAMPNLP 320
+C Q GHE+K+C GL E + E + +E EFIF+RL+VLREYLE+EL M +LP
Sbjct: 240 GLCNQFGHEVKDCEGLPREKMGKHDELADSLPCTEGEFIFLRLNVLREYLERELTMASLP 299
Query: 321 FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
F + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 300 FTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 350
Score = 139 bits (351), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR DD D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 467 GIKRKADDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 523
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 524 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 567
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 598 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 651
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 352 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 403
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 404 DQPAFTPGGILTPH 417
>gi|410954455|ref|XP_003983880.1| PREDICTED: 5'-3' exoribonuclease 2 [Felis catus]
Length = 1093
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/350 (74%), Positives = 292/350 (83%), Gaps = 5/350 (1%)
Query: 26 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 165 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 224
Query: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCI 145
DRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++L+ G
Sbjct: 225 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILSKGGF 284
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGEG
Sbjct: 285 LPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 343
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC
Sbjct: 344 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCG 403
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNLPF 321
+C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+EL M +LPF
Sbjct: 404 LCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLPF 463
Query: 322 PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 464 TFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 513
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 630 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 686
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 687 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 730
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 761 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 814
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 515 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 566
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 567 DQPAFSPGGILTPH 580
>gi|402883353|ref|XP_003905184.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Papio anubis]
Length = 971
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/367 (71%), Positives = 299/367 (81%), Gaps = 7/367 (1%)
Query: 9 WLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDK 68
W+S + ++ + + P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDK
Sbjct: 32 WVSEEVQRLLSNACQ--PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDK 89
Query: 69 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEK 128
PAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E
Sbjct: 90 PAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEA 149
Query: 129 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPG 188
E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPG
Sbjct: 150 AVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPG 208
Query: 189 WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPN 248
WK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPN
Sbjct: 209 WKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPN 268
Query: 249 FTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLS 304
FTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+
Sbjct: 269 FTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLN 328
Query: 305 VLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+Y
Sbjct: 329 VLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIY 388
Query: 365 KKTVYKT 371
K V+KT
Sbjct: 389 KNVVHKT 395
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 512 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 568
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 569 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 612
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 643 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 695
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 397 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 448
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 449 DQPAFTPSGILTPH 462
>gi|440911591|gb|ELR61240.1| 5'-3' exoribonuclease 2, partial [Bos grunniens mutus]
Length = 926
Score = 543 bits (1399), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/350 (74%), Positives = 292/350 (83%), Gaps = 5/350 (1%)
Query: 26 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 1 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCI 145
DRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++LA G
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAEIEKQRVREEILAKGGY 120
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGEG
Sbjct: 121 LPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 179
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC
Sbjct: 180 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCG 239
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNLPF 321
+C Q GH++K+C GL E + S E EFIF+RLSVLREYLE+EL M +LPF
Sbjct: 240 LCNQFGHDVKDCEGLPREKKGKHDELADSLPCAEGEFIFIRLSVLREYLERELTMASLPF 299
Query: 322 PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 300 TFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 349
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR DD D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 466 GIKRKADDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 522
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 523 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 566
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGK++AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 597 DSSIIDFYPEDFAIDLNGKRYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 649
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 351 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 402
Query: 651 KAPSFIPGGQFAPQ 664
PSF PGG P
Sbjct: 403 DQPSFSPGGILTPH 416
>gi|449269264|gb|EMC80058.1| 5'-3' exoribonuclease 2, partial [Columba livia]
Length = 914
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/349 (74%), Positives = 293/349 (83%), Gaps = 5/349 (1%)
Query: 27 QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECID 86
+E NG K+P D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE ID
Sbjct: 3 KECNGVKVPIDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYID 62
Query: 87 RLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCIL 146
R+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E +IR+++L+ G IL
Sbjct: 63 RIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAEEKQKIRQEILSKGGIL 122
Query: 147 PPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGE 206
PPE+ K FDSNCITPGT FM L+ CL YYI DRLN+DPGWK + VILSDA+ PGEGE
Sbjct: 123 PPEEVK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNSDPGWKNLTVILSDASAPGEGE 181
Query: 207 HKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDV 266
HKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC +
Sbjct: 182 HKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCAL 241
Query: 267 CGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNLPFP 322
C QMGHE+K+C GL E + S E EFIF+RL VLREYLE+EL M +LPF
Sbjct: 242 CNQMGHEVKDCQGLPREKQGKHDQFADSLPVAEQEFIFIRLCVLREYLERELTMASLPFT 301
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+ FER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 302 FDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 350
Score = 135 bits (341), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D +RLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 467 GIKRKAEDSDSEPEPE---DNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQSYVEGLC 523
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SW WY+PFHYAPFASDF IA++ ++FE G++P
Sbjct: 524 WVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKP 567
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EES
Sbjct: 598 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEES 650
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ + FK ++ K
Sbjct: 352 GYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKR--------RQKEKRKRMKR 403
Query: 651 KAPSFIPGGQFAPQ 664
P+FIPGGQF+PQ
Sbjct: 404 DQPAFIPGGQFSPQ 417
>gi|332858060|ref|XP_001145469.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 5 [Pan troglodytes]
gi|397478697|ref|XP_003810676.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Pan paniscus]
Length = 1028
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 261/351 (74%), Positives = 292/351 (83%), Gaps = 5/351 (1%)
Query: 25 KPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFEC 84
+P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE
Sbjct: 103 QPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEY 162
Query: 85 IDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGC 144
IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++LA G
Sbjct: 163 IDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVREEILAKGG 222
Query: 145 ILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGE 204
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGE
Sbjct: 223 FLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGE 281
Query: 205 GEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPC 264
GEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC
Sbjct: 282 GEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPC 341
Query: 265 DVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNLP 320
+C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+EL M +LP
Sbjct: 342 GLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASLP 401
Query: 321 FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
F + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 402 FTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 452
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 569 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 625
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 626 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 669
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 700 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 752
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 454 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 505
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 506 DQPAFTPSGILTPH 519
>gi|355563402|gb|EHH19964.1| 5'-3' exoribonuclease 2 [Macaca mulatta]
Length = 926
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 262/375 (69%), Positives = 293/375 (78%), Gaps = 29/375 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+KP+E NG KIP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 121 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + AQP+HDPNT HCLCGADADLIML
Sbjct: 180 DRLNNDPGWKNLT------------------------AQPNHDPNTHHCLCGADADLIML 215
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 216 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 275
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 276 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 335
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 336 IDRLVNIYKNVVHKT 350
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 467 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 523
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 524 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 567
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 598 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 650
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 352 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 403
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 404 DQPAFTPSGILTPH 417
>gi|431894120|gb|ELK03920.1| 5'-3' exoribonuclease 2 [Pteropus alecto]
Length = 1091
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 262/379 (69%), Positives = 292/379 (77%), Gaps = 34/379 (8%)
Query: 26 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 138 PKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 197
Query: 86 DRLFRIVRPRKLLYMAIDGV-----------------------------APRAKMNQQRS 116
DRLF IVRPR+LLYMAIDGV APRAKMNQQRS
Sbjct: 198 DRLFNIVRPRRLLYMAIDGVDKEYLEIDGQWKGMDGTDMGKEDLPDFSDAPRAKMNQQRS 257
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL
Sbjct: 258 RRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLR 316
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADAD
Sbjct: 317 YYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADAD 376
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS-- 294
LIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S
Sbjct: 377 LIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLP 436
Query: 295 --EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 437 CAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEI 496
Query: 353 REGAVDRLVNLYKKTVYKT 371
REGA+DRLVN+YK V+KT
Sbjct: 497 REGAIDRLVNIYKNVVHKT 515
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 632 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 688
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 689 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 732
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 763 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 815
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/25 (88%), Positives = 25/25 (100%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDK 25
MGVPAFFRWLSRKYPS+IV+CVE+K
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEK 25
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 517 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 568
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 569 DQPAFTPGGILTPH 582
>gi|449673057|ref|XP_002169407.2| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2-like [Hydra
magnipapillata]
Length = 999
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 254/370 (68%), Positives = 293/370 (79%), Gaps = 13/370 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS+KYP ++VHCVE+K +E N K+P D+S PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSKKYPLIVVHCVEEKAKECNDVKVPVDTSLPNPNDYEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KPAPK+E EMM+ IFE IDR+F IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPENKPAPKNETEMMLNIFEYIDRIFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ E+ E R+ + + + N GT FM RL+ CL YYI
Sbjct: 121 AAKDARERERERERLLDDRFY----------XNRYVNKNFFKXGTEFMDRLAVCLRYYIA 170
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RL NDPGWK IKVILSDAN PGEGEHKIMD+IRKQRAQPDHDPNT+HCL GADADLIML
Sbjct: 171 HRLTNDPGWKNIKVILSDANTPGEGEHKIMDFIRKQRAQPDHDPNTKHCLNGADADLIML 230
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT--FGSEVEF 298
GLATHE +FTI+REEFKPNQ RPC++CGQ+GHE +C GL E + + +VEF
Sbjct: 231 GLATHEVHFTILREEFKPNQKRPCEICGQIGHEKTDCEGLPKENLGSNCVETPIVQDVEF 290
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
IF+RL VLREYLE+EL M LPF Y+FERALDDWVFMCFFVGNDFLPHLPSLEIREGA+D
Sbjct: 291 IFIRLHVLREYLERELKMEGLPF-YNFERALDDWVFMCFFVGNDFLPHLPSLEIREGAID 349
Query: 359 RLVNLYKKTV 368
RLVN+YK+ +
Sbjct: 350 RLVNIYKRCL 359
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 76/107 (71%), Gaps = 5/107 (4%)
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD-----IAFRLMVGHEYVL 443
+ S D+V+++ ++E D +RLWE+G+K+RYY KF V K+ FR +EYV+
Sbjct: 488 RHSEDNVEKNESDDEPVDNIRLWEEGWKERYYLHKFSVSKEKDPVYFQKFRKHTANEYVI 547
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GLCWVL+YYYQGC SW W++PFHYAPFASDF +I ++D FE GT P
Sbjct: 548 GLCWVLRYYYQGCCSWNWFYPFHYAPFASDFGDIEDLDVKFEKGTVP 594
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DFKIDLNGKKFAWQGVALLPFVDE+RLH+ L Y L+ +E
Sbjct: 625 DSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDEKRLHRTLVSVYNDLTEDE 676
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
G+L DSG V L+R Q I+Q++G +EDEIF+KRQQ E K R K R ++ KM
Sbjct: 364 GYLGDSGIVNLKRAQRILQEVGDVEDEIFRKRQQFEENMKARKKQNDERNKRQKMEG 420
>gi|312089591|ref|XP_003146304.1| hypothetical protein LOAG_10732 [Loa loa]
Length = 686
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/376 (65%), Positives = 286/376 (76%), Gaps = 26/376 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+RKYPSVIV VE+KP+++NG +IP ++ PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+P+PK E+EM IFE IDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE EK+ ++A R +L ++G L+ L YY+H
Sbjct: 121 ASKEAIEKVEQIAETRSRLESEG-------------------------YPLAVALRYYVH 155
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN+DPGW+ + VILSDANVPGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIML
Sbjct: 156 QRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIML 215
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT-FGSEVEFI 299
GLATHEPNF IIREEF PNQ RPCD+CGQ GH++ +C GL + + E + E FI
Sbjct: 216 GLATHEPNFNIIREEFMPNQQRPCDLCGQYGHDLNDCKGLALDDDSECQSSPLQKETNFI 275
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
FVRL VLREYLE+EL +PN P+ ERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DR
Sbjct: 276 FVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDR 335
Query: 360 LVNLYKKTVYKTQEQL 375
LV LYK VY+ + L
Sbjct: 336 LVKLYKDMVYEMKGHL 351
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 70/95 (73%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
D+SS E+E DEVRLWEDG+KDRYY+SKF V DI FR V YV GLCWVL YYYQG
Sbjct: 466 DDSSSEDEVFDEVRLWEDGWKDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQG 525
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
C SW WY+PFHYAPFASDF +++ +F T+P
Sbjct: 526 CASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEP 560
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP++F IDLNGKK AWQGVALLPFVDE+RL + L P +KL E E
Sbjct: 592 SPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKE 644
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
KL+ M+ G LTDSG V +ER Q+I+ LG +EDEIFK RQ+ E F
Sbjct: 338 KLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSRQEREQQF 387
>gi|350537227|ref|NP_001233774.1| ethylene insensitive 5/7 [Solanum lycopersicum]
gi|312063753|gb|ADQ27233.1| 5'-3' exoribonuclease 4 [Solanum lycopersicum]
Length = 978
Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust.
Identities = 265/518 (51%), Positives = 340/518 (65%), Gaps = 36/518 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP IV VE++P++ +P D SKPNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKD----DVPVDISKPNPNGMEFDNLYLDMNGIIH 56
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE KPAP +++ +IF+ ID LF +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 57 PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASK+ AE AE R+RE+ + IL P EK DSN ITPGTPFMA LS L YYIH
Sbjct: 117 ASKDAAESEAEEKRLREEFEMEAAILVP-TEKPETSDSNVITPGTPFMAVLSIALQYYIH 175
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN + GW+ KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 176 SRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIML 235
Query: 241 GLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV--- 296
LATHE +F+I+RE P Q C CGQ+GH C G + + + +
Sbjct: 236 SLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKK 295
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++ F+ + VLREYL+ +L + N PF FER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 357 VDRLVNLYKKTV-----YKT--------------QEQLRQEENGGGGGRGVKRSFDDVDE 397
++ L+++Y++ Y T Q E+ +++S ++ +
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNER 415
Query: 398 SSEEEESN------DEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVL 449
+E + D+V+L E G+K+RYY KF V +D R V +Y+ GLCWV
Sbjct: 416 VRKEANAQPHPPAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVC 475
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YYYQG SW+W++P+HYAPFASD +A+++ F G
Sbjct: 476 RYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFPG 513
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
SPI DFYP DF++D+NGK+FAWQ V LPF+DE++L
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKL 582
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
T G+LTD+G+V L+RV+ +Q + ED+IF+KR + + + +++K Q
Sbjct: 369 TMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNERVRKEANAQ 423
>gi|307136058|gb|ADN33909.1| 5'-3' exoribonuclease [Cucumis melo subsp. melo]
Length = 934
Score = 503 bits (1296), Expect = e-139, Method: Compositional matrix adjust.
Identities = 270/497 (54%), Positives = 337/497 (67%), Gaps = 16/497 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE++P + NG +P D SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPLDGPNGVLLPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KP P D + +IF+ ID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R++ A+G L P KEK DSN ITPGT FM LS L YY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYA 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ KVILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVI--TFGSEV 296
L LATHE +F+I+RE P Q C CG++GH EC G P + T +
Sbjct: 240 LSLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++ F+ + VLREYL+ EL +PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 300 KYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKKTV-----YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
++ L+++Y+K Y T QE N GR + S + D+++L
Sbjct: 360 INLLMHIYRKEFPAIGGYLTDAGEAQENNEEMRGRARRES-----GPPPPPPTVDKIKLG 414
Query: 412 EDGFKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPF 470
E G+K+RYY KF+ +IA R V +YV GLCWV +YYY G SW+WY+P+HY+PF
Sbjct: 415 EPGYKERYYAEKFNANPANIAEIRQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPF 474
Query: 471 ASDFINIAEVDTNFETG 487
ASD N+A+++ F G
Sbjct: 475 ASDLKNLADLEITFFLG 491
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
AA ST P P SPI++FYP DF+ID+NGK+F WQGVA LPF+DE +L
Sbjct: 506 AASSTALPEKYRNLMTDP-SSPILEFYPSDFEIDMNGKRFLWQGVAKLPFIDERKL 560
>gi|15221841|ref|NP_175851.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
gi|75262833|sp|Q9FQ04.1|XRN4_ARATH RecName: Full=5'-3' exoribonuclease 4; AltName: Full=Protein ACC
INSENSITIVE 1; AltName: Full=Protein ETHYLENE
INSENSITIVE 5; AltName: Full=Protein EXORIBONUCLEASE 4
gi|11875626|gb|AAG40731.1|AF286718_1 XRN4 [Arabidopsis thaliana]
gi|17381112|gb|AAL36368.1| putative exonuclease [Arabidopsis thaliana]
gi|20259665|gb|AAM14350.1| putative exonuclease [Arabidopsis thaliana]
gi|109627646|gb|ABG34298.1| At1g54490 [Arabidopsis thaliana]
gi|332194988|gb|AEE33109.1| 5'-3' exoribonuclease 4 [Arabidopsis thaliana]
Length = 947
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 266/526 (50%), Positives = 347/526 (65%), Gaps = 47/526 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE++P + G IP D ++PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KPAP D++ ++FE ID LF +VRPRK+LY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R+ +G IL KEK DSN ITPGTPFMA LS L YYI
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQIL-SAKEKAETCDSNVITPGTPFMAILSVALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ +KVILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C VCGQ GH +C G N + I + ++
Sbjct: 240 LSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKK-KY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL+ ELA+P+ PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+++Y+K V ++++ Q+ +K+S D
Sbjct: 359 LLMHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRT------RIKQSMD 412
Query: 394 DVDESSEE----------EESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEY 441
+ +E + E +D+++L E G+K+RYY KF P++ + + +Y
Sbjct: 413 NNEEMKQRSRRDPSEVPPEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKY 472
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V GLCWV +YYYQG SW+W++P+HYAPFASD N+ +++ F G
Sbjct: 473 VEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIG 518
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+ FYP DF++D+NGK+FAWQG+A LPF++E+ L A E L+VEE +
Sbjct: 552 SPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQ 604
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRER 641
G+LTDSG+V L+RV+ +Q + + ED+IF+KR + + +MK+R R
Sbjct: 373 GYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQRSRR 423
>gi|167861118|gb|ACA05276.1| putative ethylene insensitive 5/7 [Solanum lycopersicum]
Length = 696
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 264/518 (50%), Positives = 339/518 (65%), Gaps = 36/518 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP IV VE++P++ +P D SKPNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIVDMVEEEPKD----DVPVDISKPNPNGMEFDNLYLDMNGIIH 56
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE KPAP +++ +IF+ ID LF +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 57 PCFHPEGKPAPATYNDVFNSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRFR 116
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASK+ AE AE R+RE+ + IL P EK DSN ITPGTPFMA LS L Y IH
Sbjct: 117 ASKDAAESEAEEKRLREEFEMEAAILVP-TEKPETSDSNVITPGTPFMAVLSIALQYNIH 175
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN + GW+ KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 176 SRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNPNTRHCLYGLDADLIML 235
Query: 241 GLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV--- 296
LATHE +F+I+RE P Q C CGQ+GH C G + + + +
Sbjct: 236 SLATHEVHFSILREVITPPGQQEKCFACGQVGHLAASCHGTNGNHGKDGKAVNDTPIHKK 295
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++ F+ + VLREYL+ +L + N PF FER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 296 KYQFLHIWVLREYLQYDLEIYNPPFQIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 355
Query: 357 VDRLVNLYKKTV-----YKT--------------QEQLRQEENGGGGGRGVKRSFDDVDE 397
++ L+++Y++ Y T Q E+ +++S ++ +
Sbjct: 356 INLLMSIYRRDFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNER 415
Query: 398 SSEEEESN------DEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVL 449
+E + D+V+L E G+K+RYY KF V +D R V +Y+ GLCWV
Sbjct: 416 VRKEANAQPHPPAEDKVKLGEPGYKERYYSEKFGVSTAEDIHEVRQDVVQKYMEGLCWVC 475
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YYYQG SW+W++P+HYAPFASD +A+++ F G
Sbjct: 476 RYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFPG 513
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
SPI DFYP DF++D+NGK+FAWQ V LPF+DE++L
Sbjct: 547 SPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKL 582
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
T G+LTD+G+V L+RV+ +Q + ED+IF+KR + + + +++K Q
Sbjct: 369 TMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIQQSIENNERVRKEANAQ 423
>gi|4585991|gb|AAD25627.1|AC005287_29 Dhm1- and Dhm2-like protein [Arabidopsis thaliana]
Length = 965
Score = 501 bits (1289), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/521 (50%), Positives = 344/521 (66%), Gaps = 48/521 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE++P + G IP D ++PNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KPAP D++ ++FE ID LF +VRPRK+LY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R+ +G IL KEK DSN ITPGTPFMA LS L YYI
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQIL-SAKEKAETCDSNVITPGTPFMAILSVALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ +KVILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C VCGQ GH +C G N + I + ++
Sbjct: 240 LSLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKK-KY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL+ ELA+P+ PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK------------------------------TVYKTQEQLRQEENGGGGGRGV 388
L+++Y+K +++ + +++Q+
Sbjct: 359 LLMHVYRKEFTAMGGYLTDSGEVNRVEHFIQAVAVNEDKIFQKRTRIKQQ---------- 408
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLC 446
RS D E E +D+++L E G+K+RYY KF P++ + + +YV GLC
Sbjct: 409 -RSRRDPSEVP-PEPIDDKIKLGEPGYKERYYAEKFSTTNPEETEQIKQDMVLKYVEGLC 466
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WV +YYYQG SW+W++P+HYAPFASD N+ +++ F G
Sbjct: 467 WVCRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIG 507
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+ FYP DF++D+NGK+FAWQG+A LPF++E+ L A E L+VEE +
Sbjct: 541 SPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLTVEEQQ 593
>gi|320163497|gb|EFW40396.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1196
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/371 (63%), Positives = 286/371 (77%), Gaps = 6/371 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FR+LS K+P ++ C E +NG K+P D+S+PNPN EFDNLYLDMNG+IH
Sbjct: 1 MGVPAMFRYLSNKFPKLVTPCAETPSTVINGTKVPIDTSRPNPNQQEFDNLYLDMNGLIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D+P P EDEMMV IFE I+R+F IVRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPIDRPPPASEDEMMVLIFEYIERIFAIVRPRKLVYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A +E AE ++A +R KL ADG LP ++KG FDSNCITPGT FM +L+ CL Y+IH
Sbjct: 121 AVREAAESATKLAELRAKLEADGVRLP--QKKGHKFDSNCITPGTEFMEQLAVCLRYFIH 178
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGW+ IKVILSDANVPGEGEHKIMDYIR QRA P++DPN +H + GADADLIML
Sbjct: 179 RKLMEDPGWQNIKVILSDANVPGEGEHKIMDYIRHQRAHPEYDPNIKHVMYGADADLIML 238
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP--ESVITFGSEVEF 298
GLATHE +FTIIREEF PN +PC +C QMGHE EC G + P+ E+ G + F
Sbjct: 239 GLATHEISFTIIREEFVPNTPKPCSICNQMGHESTECRGEASVPDSTVEAAPASGPK-NF 297
Query: 299 IFVRLSVLREYLEKELAMP-NLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
IF+ + +LREYL EL + LPF + ERA+DDWVFMCFFVGNDFLPHLPSLEIREGA+
Sbjct: 298 IFISIPILREYLSHELLISERLPFEFDIERAIDDWVFMCFFVGNDFLPHLPSLEIREGAL 357
Query: 358 DRLVNLYKKTV 368
+ L+++Y++ +
Sbjct: 358 ETLLSIYRRRL 368
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 60/83 (72%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWE G+K+RYY++KF V DD FR + Y+ GLCWVL+YYYQG SWKWY+P+HY
Sbjct: 626 VRLWEQGWKERYYQNKFHVSADDNDFRSKLAAAYLEGLCWVLQYYYQGVPSWKWYYPYHY 685
Query: 468 APFASDFINIAEVDTNFETGTQP 490
APFASD V+T F+ G +P
Sbjct: 686 APFASDLPAATNVNTKFDKGPRP 708
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPI+DFYP +F++D+NGKK AW GV LLPF++E+RL L Y+ L EE E
Sbjct: 739 ESPILDFYPTEFEVDMNGKKAAWMGVVLLPFIEEKRLLDTLKTVYDDLRPEEVE 792
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 585 RMLTYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
R+ + GF+TDSG V +ER I++++G MED IF++R +E + RN+ ++ ++R+ +
Sbjct: 367 RLPSMGGFITDSGQVVVERALEILREIGTMEDSIFQRR-HSEDERQKRNEQRREQDRKRR 425
Query: 645 MAAQSTKAPSF 655
++ T +PS
Sbjct: 426 EQSERTWSPSM 436
>gi|296200318|ref|XP_002747535.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Callithrix jacchus]
Length = 896
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/321 (74%), Positives = 267/321 (83%), Gaps = 5/321 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ C
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKC 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGAD
Sbjct: 120 LRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGAD 179
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S
Sbjct: 180 ADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 ----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSL
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
EIREGA+DRLVN+YK V+KT
Sbjct: 300 EIREGAIDRLVNIYKNVVHKT 320
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 437 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 493
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 494 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 568 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 322 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 360
>gi|338719278|ref|XP_003363975.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Equus caballus]
gi|338719280|ref|XP_003363976.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Equus caballus]
Length = 896
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 240/321 (74%), Positives = 267/321 (83%), Gaps = 5/321 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ C
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKC 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGAD
Sbjct: 120 LRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGAD 179
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S
Sbjct: 180 ADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 ----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSL
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
EIREGA+DRLVN+YK V+KT
Sbjct: 300 EIREGAIDRLVNIYKNVVHKT 320
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 437 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 493
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 494 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 568 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 322 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 373
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 374 DQPAFTPGGILTPH 387
>gi|449442897|ref|XP_004139217.1| PREDICTED: 5'-3' exoribonuclease 4-like [Cucumis sativus]
Length = 934
Score = 498 bits (1282), Expect = e-138, Method: Compositional matrix adjust.
Identities = 267/497 (53%), Positives = 335/497 (67%), Gaps = 16/497 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP-QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE++P +G P D SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KP P D + +IF+ ID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R++ A+G L P KEK DSN ITPGT FM LS L YY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYA 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ KVILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVI--TFGSEV 296
L LATHE +F+I+RE P Q C CG++GH EC G P + T +
Sbjct: 240 LSLATHEVHFSILREVIMLPGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++ F+ + VLREYL+ EL +PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 300 KYQFLNIWVLREYLQYELDIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKKTV-----YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
++ L+++Y+K Y T QE N GR + + + D+++L
Sbjct: 360 INLLMHIYRKEFPAIGGYLTDAGEAQENNEEMRGRARRE-----NGPPPPPPTVDKIKLG 414
Query: 412 EDGFKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPF 470
E G+K+RYY KF+ +IA + V +YV GLCWV +YYY G SW+WY+P+HY+PF
Sbjct: 415 EPGYKERYYAEKFNANPANIAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPF 474
Query: 471 ASDFINIAEVDTNFETG 487
ASD N+A+++ F G
Sbjct: 475 ASDLKNLADLEITFFIG 491
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
AA ST P P SPI++FYP DF+ID+NGK+F WQGVA LPF+DE +L
Sbjct: 506 AASSTALPEKYRNLMTDP-SSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKL 560
>gi|426240937|ref|XP_004014350.1| PREDICTED: 5'-3' exoribonuclease 2 [Ovis aries]
Length = 897
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 239/321 (74%), Positives = 267/321 (83%), Gaps = 5/321 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ C
Sbjct: 61 RSRRFRASKEGMEAAIEKQRVREEILAKGGYLPPEEIK-ERFDSNCITPGTEFMDNLAKC 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGAD
Sbjct: 120 LRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGAD 179
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GH++K+C GL E + S
Sbjct: 180 ADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHDVKDCEGLPREKKGKHDELADS 239
Query: 295 ----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
E EFIF+RLS+LREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSL
Sbjct: 240 LPCAEGEFIFLRLSILREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
EIREGA+DRLVN+YK V+KT
Sbjct: 300 EIREGAIDRLVNIYKNVVHKT 320
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 437 GIKRKVEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 493
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 494 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 568 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 322 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 373
Query: 651 KAPSFIPGGQFAPQ 664
PSF PGG P
Sbjct: 374 DQPSFSPGGILTPH 387
>gi|332238206|ref|XP_003268294.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Nomascus leucogenys]
Length = 896
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/321 (74%), Positives = 266/321 (82%), Gaps = 5/321 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ C
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKC 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGAD
Sbjct: 120 LRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGAD 179
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S
Sbjct: 180 ADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 ----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSL
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
EIRE A+DRLVN+YK V+KT
Sbjct: 300 EIRENAIDRLVNIYKNVVHKT 320
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 437 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 493
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 494 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 568 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 322 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 373
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 374 DQPAFTPSGILTPH 387
>gi|194380934|dbj|BAG64035.1| unnamed protein product [Homo sapiens]
Length = 896
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 239/321 (74%), Positives = 266/321 (82%), Gaps = 5/321 (1%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPCTHPEDKPAPK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ C
Sbjct: 61 RSRRFRASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKC 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YYI DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGAD
Sbjct: 120 LRYYIADRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGAD 179
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLIMLGLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S
Sbjct: 180 ADLIMLGLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADS 239
Query: 295 ----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSL
Sbjct: 240 LPCAEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSL 299
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
EIRE A+DRLVN+YK V+KT
Sbjct: 300 EIRENAIDRLVNIYKNVVHKT 320
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 437 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 493
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 494 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 537
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 568 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 620
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 322 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 373
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 374 DQPAFTPSGILTPH 387
>gi|357512203|ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 956
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/530 (50%), Positives = 343/530 (64%), Gaps = 52/530 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE--VNGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAF+RWL+ +YP IV VE+ P G P D S+PNPNGMEFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HP+ KPAP D++ ++F+ ID LF +VRPRKLLY+AIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE R+R + AD L KEK DSN ITPGTPFMA LS L YY
Sbjct: 121 FRAAKDAAEAEAEEERLRNE-FADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I RLN +PGW+ KV+LSD+NVPGEGEHKIMDYIR QR P DPNT+HCL G DADLI
Sbjct: 180 IQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAE-----PNPESVITF 292
ML LATHE +F+I+RE P Q C +CGQ+GH EC G + P ++ I
Sbjct: 240 MLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDWPVDDTPI-- 297
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ F+ + VLREYL+ EL +P+ PF FER +DD+VF+CFFVGNDFLPH+P+LEI
Sbjct: 298 -HKKKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEI 356
Query: 353 REGAVDRLVNLYKK--------------------------------TVYKTQEQLRQEEN 380
REGAV+ L+++Y+K +++ + +++Q +
Sbjct: 357 REGAVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQE 416
Query: 381 GGGGGRGVKRSFDDVDESSEEEESN--DEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMV 437
G R R E EE ++ D+V+L + G+ +RYY KF +I + +
Sbjct: 417 FNEGMRARARG-----EMPEEPRASVVDKVKLGQPGYTERYYAEKFGASDPEIERIKKDI 471
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV +YYYQG SW+WY+P+HYAPFASD ++A+++ F G
Sbjct: 472 VLKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMG 521
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI+ FYP DF+ID+NGKK++WQGVA LPF+DE++L A L+ EE
Sbjct: 555 SPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSATRTLEGTLTEEE 605
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
G+LTD+G+V LERV+ +Q + + E++IF+KR + + + M+ R +M
Sbjct: 377 GYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFNEGMRARARGEM 429
>gi|224131346|ref|XP_002328516.1| predicted protein [Populus trichocarpa]
gi|222838231|gb|EEE76596.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/529 (50%), Positives = 353/529 (66%), Gaps = 49/529 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP IV +E++PQE NG P D SKPNPNG+E+DNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIVDVIEEEPQEDSNGNSKPIDVSKPNPNGIEYDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KPAP D++ +IF ID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFVYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G +L KEK DSN ITPGT FMA LS L YYI
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGVLL-SVKEKPETRDSNVITPGTQFMAVLSIALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ KVILSDANVPGEGEHKIM YIR QR P + NT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNIPGFNSNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV-- 296
L LATHE +F+I+RE P Q C +CGQ GH EC G + + + + +
Sbjct: 240 LSLATHEVHFSILREMVIFPGQQDKCFLCGQAGHLAAECRGKQGDDALDWNVVDDTPIHK 299
Query: 297 -EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
++ F+ + VLREYL+ +L +PN PF FE+ +DD+VFMCFFVGNDFLPH+P+LEIREG
Sbjct: 300 KKYQFLNIWVLREYLQYDLDIPNPPFAIDFEKIVDDFVFMCFFVGNDFLPHMPTLEIREG 359
Query: 356 AVDRLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKR 390
A++ L+++Y++ +V +EQ+ Q+ +++
Sbjct: 360 AINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKR------ARIQQ 413
Query: 391 SFDDVDES--------SEEEESN--DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM--VG 438
+F++ +E SEE ++ D+V+L E G+K+RYY KFD+ ++ ++ V
Sbjct: 414 AFENNEEMKHKARRDLSEEIQAPPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVV 473
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV +YYYQG SW+W++P+HYAPFASD ++ E++ F G
Sbjct: 474 LKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDIKDLDEMEITFFLG 522
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
SPI F+P DF+ID+NGK+FAWQG+A LPF+DE +L
Sbjct: 556 SPIHQFFPSDFEIDMNGKRFAWQGIAKLPFIDERKL 591
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
G+LT +G+V L++V+ +Q + + E++IF+KR + + F+ +MK + R + Q+
Sbjct: 377 GYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFENNEEMKHKARRDLSEEIQA 435
>gi|357512205|ref|XP_003626391.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355501406|gb|AES82609.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 629
Score = 494 bits (1273), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/527 (50%), Positives = 342/527 (64%), Gaps = 46/527 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE--VNGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAF+RWL+ +YP IV VE+ P G P D S+PNPNGMEFDNLYLDMNGI
Sbjct: 1 MGVPAFYRWLADRYPRSIVDVVEEAPSPSVAGGPPFPVDVSRPNPNGMEFDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HP+ KPAP D++ ++F+ ID LF +VRPRKLLY+AIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCFHPDGKPAPATYDDVFKSMFDYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE R+R + AD L KEK DSN ITPGTPFMA LS L YY
Sbjct: 121 FRAAKDAAEAEAEEERLRNE-FADQIELLTSKEKTETHDSNVITPGTPFMAVLSVALQYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I RLN +PGW+ KV+LSD+NVPGEGEHKIMDYIR QR P DPNT+HCL G DADLI
Sbjct: 180 IQTRLNYNPGWRNTKVMLSDSNVPGEGEHKIMDYIRLQRNLPGFDPNTRHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVI--TFGSE 295
ML LATHE +F+I+RE P Q C +CGQ+GH EC G + + + T +
Sbjct: 240 MLSLATHEIHFSILREVITFPGQQEKCYMCGQVGHLAAECRGKPGDNALDWPVDDTPIHK 299
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
++ F+ + VLREYL+ EL +P+ PF FER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 300 KKYQFLHIWVLREYLQYELLIPDPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Query: 356 AVDRLVNLYKK--------------------------------TVYKTQEQLRQEENGGG 383
AV+ L+++Y+K +++ + +++Q +
Sbjct: 360 AVNLLMHIYRKEFTAMGGYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFNE 419
Query: 384 GGRGVKRSFDDVDESSEEEESN--DEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMVGHE 440
G R R E EE ++ D+V+L + G+ +RYY KF +I + + +
Sbjct: 420 GMRARARG-----EMPEEPRASVVDKVKLGQPGYTERYYAEKFGASDPEIERIKKDIVLK 474
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV GLCWV +YYYQG SW+WY+P+HYAPFASD ++A+++ F G
Sbjct: 475 YVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFMG 521
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
SPI+ FYP DF+ID+NGKK++WQGVA LPF+DE++L A
Sbjct: 555 SPILQFYPSDFEIDMNGKKYSWQGVAKLPFIDEKKLLSA 593
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
G+LTD+G+V LERV+ +Q + + E++IF+KR + + + M+ R +M
Sbjct: 377 GYLTDAGEVFLERVENFIQCVAVHEEQIFQKRVRIQQSQEFNEGMRARARGEM 429
>gi|359487905|ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 950
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/525 (50%), Positives = 349/525 (66%), Gaps = 53/525 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP ++ VE++P E G +I D S+PNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSE-GGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ KPAP D++ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ AE AE R+R++ +G +L P KEK DSN ITPGT FMA LS L YYIH
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVALQYYIH 176
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN +PGW KVILSD+NVPGEGEHKIM YIR QR +PNT+HCL G DADLIML
Sbjct: 177 SRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIML 236
Query: 241 GLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LATHE +F+I+RE P Q C +CGQ+GH EC G++ + T + ++
Sbjct: 237 SLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGIEVVDD-----TPIHKKKYQ 291
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
F+ + VLREYL+ +L + N PF +FER LDD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 292 FLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINL 351
Query: 360 LVNLYKK--------------------------------TVYKTQEQLRQE-ENGGGGGR 386
L+++Y++ +++ + +++Q EN
Sbjct: 352 LMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNEEMKL 411
Query: 387 GVKRSFDDVDESSEEEES--NDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYV 442
KR E+SEE + D+V+L E G+K+RYY KF++ P++ R + +YV
Sbjct: 412 RTKR------EASEEPRAPVEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYV 465
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GLCWV +YYYQG SW+WY+PFHYAPFASD ++ +++ F G
Sbjct: 466 EGLCWVCRYYYQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFLG 510
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
Q SPI+DFYP DF+ID+NGK++AWQGVA LPF+DEE+L L+VEE
Sbjct: 542 QSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEE 594
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTD+G+V L+RV+ ++ + + ED+IF+KR + + + +MK R +R+ A++
Sbjct: 365 GYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALENNEEMKLRTKRE---ASEEP 421
Query: 651 KAP 653
+AP
Sbjct: 422 RAP 424
>gi|255542378|ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 964
Score = 490 bits (1262), Expect = e-135, Method: Compositional matrix adjust.
Identities = 273/530 (51%), Positives = 348/530 (65%), Gaps = 51/530 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP IV VE++P+E NG P D SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLAIVDVVEEEPKEDSNGVIGPIDISKPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HP+ KP P D++ +IF+ ID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPDGKPPPPTYDDVFKSIFDYIDHLFTLVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R++ A+G +L P KEK DSN ITPGT FMA LS L YY+
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGKLLSP-KEKPETSDSNVITPGTQFMAVLSTGLQYYV 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGWK KVILSDANVPGEGEHK+M YIR QR +PNT+HCL G DADLIM
Sbjct: 180 QMRLNHNPGWKYTKVILSDANVPGEGEHKVMSYIRLQRNLSGFNPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEP----NPESVITFGS 294
L LATHE +F+I+RE P Q C CGQ GH +C G + N E +
Sbjct: 240 LALATHEIHFSILREMVTFPGQQEKCFSCGQTGHLAADCRGKPGDNPLDWNVEDDVPIHK 299
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ ++ F+ + VLREYL+ EL +PN P +FER LDD+VF+CFFVGNDFLPH+P+LEIRE
Sbjct: 300 K-KYQFLNIWVLREYLQYELDVPNPPLEINFERILDDFVFLCFFVGNDFLPHMPTLEIRE 358
Query: 355 GAVDRLVNLYKK-------------------------TVYKTQEQLRQE--------ENG 381
GA++ L+++Y++ +V +EQ+ Q+ EN
Sbjct: 359 GAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENN 418
Query: 382 GGGGRGVKRSFDDVDESSEEEESN--DEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMV 437
+R ESSEE ++ D+V+L E G+K+RYY KF + P + R V
Sbjct: 419 EEMRLKARR------ESSEEIQTPAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDV 472
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV +YYYQG SW+W++P+HYAPFASD +A+++ F G
Sbjct: 473 VLKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFLG 522
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI F+P DF+ID+NGK+FAWQG+A LPF+DE +L L+ EE
Sbjct: 556 SPISRFFPLDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEE 606
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
G+LTD+G+V L+RV+ +Q + + E++IF+KR + + + +M+ + R+ Q+
Sbjct: 377 GYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLENNEEMRLKARRESSEEIQT 435
>gi|395851967|ref|XP_003798518.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 908
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 246/375 (65%), Positives = 278/375 (74%), Gaps = 48/375 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+K
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKT---------------------------------- 26
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+PK+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 27 ---------SPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 77
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 78 ASKEGMEAALEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 136
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+ + VILSDA+VPGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 137 DRLNNDPGWENLTVILSDASVPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 196
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 197 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 256
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 257 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGA 316
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 317 IDRLVNIYKNVVHKT 331
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 449 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 505
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 506 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 549
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 580 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 633
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 333 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 384
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 385 DQPAFTPSGILTPH 398
>gi|413932824|gb|AFW67375.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 652
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 263/521 (50%), Positives = 347/521 (66%), Gaps = 34/521 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF+ ID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L +KEK DSN ITPGT FM LS L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ GW+ +K+ILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G ++P+ + + ++
Sbjct: 240 LALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRG-PSQPDNSVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL K+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYK-------------------------KTVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+++Y+ ++V +EQ+ Q+ R
Sbjct: 359 LLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKH 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD---IAFRLMVGHEYVLGLCWVL 449
+ E+SEE++ D+V+L E G+++RYY KF + + R V +YV GLCWV+
Sbjct: 419 KMQRENSEEDQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVM 478
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
+YYYQG SW+W++P+HYAPFASD +AE++ F G QP
Sbjct: 479 RYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLG-QP 518
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G + DSP+ FYP+DF+ID+NGK+FAWQGVA LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
+ L+ EE
Sbjct: 590 RKLEDTLTEEE 600
>gi|390354472|ref|XP_786402.3| PREDICTED: 5'-3' exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 803
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 264/555 (47%), Positives = 335/555 (60%), Gaps = 99/555 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL +K PS+IV C E+K + V+G++IP ++++ NPNG+EFDNLYLDMN II
Sbjct: 42 MGVPGLFMWLRKKCPSMIVDCEEEKAKHVDGKRIPVNTTQRNPNGVEFDNLYLDMNEIIV 101
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P +KPAP+++DE+M IF IDRL IVRPRKLLY+A DGVAPRAKM + RS RF
Sbjct: 102 PCCYPSNKPAPQNDDEIMCEIFLNIDRLVSIVRPRKLLYIAFDGVAPRAKMKKMRSSRFI 161
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
SK E + R ++ G LPP++++ PG FM R + YY+
Sbjct: 162 GSKIRRENREAQDKKRSEIEDSGRHLPPKRKE--------TYPGKGFMFRQAEYFRYYVT 213
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLNNDPGW+GIKVILSDAN PGEGEHKIMDYIRKQRA PD++P+T HC+ GAD+
Sbjct: 214 ERLNNDPGWQGIKVILSDANTPGEGEHKIMDYIRKQRANPDYNPSTHHCVHGADS----- 268
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
LATHE NFTIIRE+FKPNQ R C++C Q HEM +C GLDA P
Sbjct: 269 -LATHEMNFTIIREQFKPNQRRACELCYQEDHEMTDCQGLDAPPEERE------------ 315
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
EYL EL + + F + ER +DDWVF+CFFVGNDFLPHLPSL IREGA+D L
Sbjct: 316 ------NEYLVNEL-LEGIHFHCNHERVIDDWVFLCFFVGNDFLPHLPSLNIREGAIDIL 368
Query: 361 VNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDD-------------VDE---------- 397
+ LY+K ++ T++ L ENG + V++ D VDE
Sbjct: 369 IRLYRKALHNTKDYL--TENGVVNLKLVQQLMTDLGKEEDETFKKWRVDELKNEETKIMP 426
Query: 398 ----SSEEEESND--------------------------------EVRLWEDGFKDRYYE 421
+EE ++ND VRLWE+G+K RYY+
Sbjct: 427 ANPADAEEVDTNDTVSLLLVDHQHGDARMPSRDNANKNPADAEEDTVRLWEEGWKKRYYQ 486
Query: 422 SKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI-----N 476
K V D FR Y+ GLCW+ +YYYQGC SWKWYFP+HYAPFASDF+ +
Sbjct: 487 HKLKVASSDHDFRAQFVRRYIEGLCWLFRYYYQGCASWKWYFPYHYAPFASDFLASDFPD 546
Query: 477 IAEVDTNFETGTQPV 491
I ++ NFE GT+P+
Sbjct: 547 IDDLSINFEKGTKPL 561
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 42/54 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIIDFYPEDF IDLNG K+ QGVALLPFVDE+RL + LA Y L+ EE +
Sbjct: 589 DSPIIDFYPEDFHIDLNGNKYPSQGVALLPFVDEDRLLRCLADVYPDLTPEEKK 642
>gi|413932825|gb|AFW67376.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 990
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 262/518 (50%), Positives = 345/518 (66%), Gaps = 33/518 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF+ ID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L +KEK DSN ITPGT FM LS L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ GW+ +K+ILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G ++P+ + + ++
Sbjct: 240 LALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRG-PSQPDNSVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL K+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYK-------------------------KTVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+++Y+ ++V +EQ+ Q+ R
Sbjct: 359 LLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKH 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFD---VPKDDIAFRLMVGHEYVLGLCWVL 449
+ E+SEE++ D+V+L E G+++RYY KF K + R V +YV GLCWV+
Sbjct: 419 KMQRENSEEDQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVM 478
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 479 RYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLG 516
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G + DSP+ FYP+DF+ID+NGK+FAWQGVA LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
+ L+ EE
Sbjct: 590 RKLEDTLTEEE 600
>gi|108711532|gb|ABF99327.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 682
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 267/523 (51%), Positives = 347/523 (66%), Gaps = 38/523 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + VE++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G + + + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-SGQADKTVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+N+Y++ +V +EQ+ Q+ +
Sbjct: 359 LLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERN 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFD-----VPKDDIAFRLMVGHEYVLGLCW 447
V E+SE+ + D+V+L E G++ RYY KF P D + + V +YV GLCW
Sbjct: 419 RVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQV--QRDVVQKYVEGLCW 476
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V++YYYQG SW+W++P+HYAPFASD +AE++ F G QP
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLG-QP 518
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
E L+ EE
Sbjct: 590 QKLEETLTDEE 600
>gi|356576739|ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 931
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/533 (50%), Positives = 341/533 (63%), Gaps = 63/533 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQ-EVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE+ P +G P D+SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HP+ KPAP D++ +IF+ +D L+ +VRPRKLLY+AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPDGKPAPATYDDVFKSIFDYLDHLYTLVRPRKLLYLAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R++ ++G +L K+K DSN ITPGT FM LS L YYI
Sbjct: 121 RAAKDAAEAEAEEERLRKEFQSEGKVL-SSKDKPETSDSNVITPGTQFMVALSVSLQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++P W+ KVILSD+N PGEGEHKIM+YIR QR P +PNT+HCL G DADLIM
Sbjct: 180 QTRLNHNPSWRNTKVILSDSNAPGEGEHKIMEYIRLQRNLPGFNPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ GH +C D + +S I + ++
Sbjct: 240 LSLATHEVHFSILREVVTLPGQQDKCFLCGQAGHFAADCQAEDFDTPDDSPI---HKKKY 296
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL+ EL +PN PF FER +DD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 297 QFLNIWVLREYLQFELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGAIN 356
Query: 359 RLVNLYKK---------------------------TVYKTQ-------EQLRQEENGGGG 384
L+++Y+K TV++ Q QL E N
Sbjct: 357 LLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENNEEMR 416
Query: 385 GRGVKRSFDDVDESSEEEESN--DEVRLWEDGFKDRYYESKFDVP--------KDDIAFR 434
R E E ++ D+V+L E G+K+RYY KF V K DI +
Sbjct: 417 ARA-------RGEMPGEPRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLK 469
Query: 435 LMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV GLCWV +YYYQG SWKWY+P+HYAPFASDF ++ +++ NF G
Sbjct: 470 ------YVEGLCWVCRYYYQGVCSWKWYYPYHYAPFASDFKDLPDLEINFFPG 516
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI FYP DF+ID+NGK+FAWQGVA LPF+DE++L A + L+ EE
Sbjct: 550 SPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRRIEDTLTEEE 600
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
G+LTD+G+V L+RVQ +Q + + ED+IF+KR + + + +M+ R +M
Sbjct: 371 GYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAENNEEMRARARGEM 423
>gi|38569540|gb|AAR24369.1| 5'-3' exoribonuclease 2 isoform 3 [Homo sapiens]
Length = 907
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 244/375 (65%), Positives = 275/375 (73%), Gaps = 48/375 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPS+IV+CVE+K
Sbjct: 1 MGVPAFFRWLSRKYPSIIVNCVEEKT---------------------------------- 26
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ K+EDEMMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 27 ---------STKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 77
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI
Sbjct: 78 ASKEGMEAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIA 136
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGWK + VILSDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIML
Sbjct: 137 DRLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIML 196
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EV 296
GLATHEPNFTIIREEFKPN+ +PC +C Q GHE+K+C GL E + S E
Sbjct: 197 GLATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEG 256
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A
Sbjct: 257 EFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENA 316
Query: 357 VDRLVNLYKKTVYKT 371
+DRLVN+YK V+KT
Sbjct: 317 IDRLVNIYKNVVHKT 331
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 448 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 504
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 505 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 548
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 579 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 631
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 333 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 384
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 385 DQPAFTPSGILTPH 398
>gi|242037819|ref|XP_002466304.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
gi|241920158|gb|EER93302.1| hypothetical protein SORBIDRAFT_01g005340 [Sorghum bicolor]
Length = 990
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/520 (50%), Positives = 343/520 (65%), Gaps = 37/520 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFYYIDHLFGLVRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L +KEK DSN ITPGT FM LS L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTQFMFVLSTALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ GW+ +K+ILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ GH EC G ++P+ + + ++
Sbjct: 240 LALATHEVHFSILREVISMPGQQEKCFLCGQAGHLAAECRG-PSQPDNSVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL K+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYK-------------------------KTVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+++Y+ ++V +EQ+ Q+ R
Sbjct: 359 LLMSIYRSEFTSMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKH 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKF-----DVPKDDIAFRLMVGHEYVLGLCW 447
+ E+SEE + D+V+L E G+++RYY KF P D + R V +YV GLCW
Sbjct: 419 RIQRENSEENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIDQV--RRDVVQKYVEGLCW 476
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLG 516
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G DSP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMTDPDSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDEMRLLAET 589
Query: 706 APYYEKLSVEE 716
+ L+ EE
Sbjct: 590 RKLEDSLTEEE 600
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 584 SRMLTYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
S + G+LTD G+V L+RV+ +Q + + E++IF+KR + + + N+ K R +R+
Sbjct: 366 SEFTSMGGYLTDGGEVILDRVEHFIQSVAVNEEQIFQKRARIQQA-RENNEEKHRIQRE 423
>gi|108711533|gb|ABF99328.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
Length = 718
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/520 (50%), Positives = 345/520 (66%), Gaps = 37/520 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + VE++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G + + + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-SGQADKTVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+N+Y++ +V +EQ+ Q+ +
Sbjct: 359 LLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERN 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFD-----VPKDDIAFRLMVGHEYVLGLCW 447
V E+SE+ + D+V+L E G++ RYY KF P D + + V +YV GLCW
Sbjct: 419 RVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQV--QRDVVQKYVEGLCW 476
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLG 516
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
E L+ EE
Sbjct: 590 QKLEETLTDEE 600
>gi|115455883|ref|NP_001051542.1| Os03g0794800 [Oryza sativa Japonica Group]
gi|50400038|gb|AAT76426.1| putative 5'-3' exonuclease [Oryza sativa Japonica Group]
gi|108711531|gb|ABF99326.1| 5'-3' exoribonuclease, putative, expressed [Oryza sativa Japonica
Group]
gi|113550013|dbj|BAF13456.1| Os03g0794800 [Oryza sativa Japonica Group]
Length = 988
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 265/520 (50%), Positives = 345/520 (66%), Gaps = 37/520 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + VE++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G + + + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-SGQADKTVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+N+Y++ +V +EQ+ Q+ +
Sbjct: 359 LLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEERN 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFD-----VPKDDIAFRLMVGHEYVLGLCW 447
V E+SE+ + D+V+L E G++ RYY KF P D + + V +YV GLCW
Sbjct: 419 RVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQV--QRDVVQKYVEGLCW 476
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 477 VMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLG 516
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 531 AASSNALPKYY-GDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
E L+ EE
Sbjct: 590 QKLEETLTDEE 600
>gi|224123332|ref|XP_002319052.1| predicted protein [Populus trichocarpa]
gi|222857428|gb|EEE94975.1| predicted protein [Populus trichocarpa]
Length = 965
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/529 (49%), Positives = 342/529 (64%), Gaps = 49/529 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-VNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+R L+ +YP I +E++PQE NG P D SKPNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRLLADRYPLSISDVIEEEPQEDSNGNSKPIDVSKPNPNGIEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KPAP D++ +IF ID LF +VRPRKLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSIFAYIDHLFALVRPRKLLFMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G +L KEK FDSN ITPGT FMA LS L YYI
Sbjct: 121 RAAKDAAQAEAEEERLRKEFEAEGELL-SVKEKPETFDSNVITPGTQFMAALSTALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++ GW+ KVILSD+NVPGEGEHKIM YIR QR +PNT+HCL DADLIM
Sbjct: 180 QSRLNHNLGWQNTKVILSDSNVPGEGEHKIMSYIRLQRNLSGFNPNTRHCLYSLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV-- 296
L LAT E +F+I+RE P Q C +CGQ GH EC G + + + + +
Sbjct: 240 LSLATREVHFSILREIVTLPGQQDKCFLCGQAGHLAAECRGKQGDDALDWHVVDDTPIHK 299
Query: 297 -EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
++ F+ + VLREYL+ +L + N PF FER +DD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 300 KKYQFLNIWVLREYLQYDLDILNPPFAIDFERIVDDFVFLCFFVGNDFLPHMPTLEIREG 359
Query: 356 AVDRLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKR 390
A+ L+++Y++ V +EQ+ Q+ +++
Sbjct: 360 AISLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRT------RIQQ 413
Query: 391 SFDDVDE---SSEEEESN-------DEVRLWEDGFKDRYYESKFDVPKDD--IAFRLMVG 438
+FD+ +E + E S D+V+L E G+K+RYY KF++ + R V
Sbjct: 414 AFDNNEEMKLKARRESSEVIQAPVVDKVKLGEPGYKERYYAEKFELSNQEEIDKVRKEVV 473
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV YY+QG SW+W++PFHYAPFASD ++ EV+ NF G
Sbjct: 474 LKYVEGLCWVCHYYFQGVCSWQWFYPFHYAPFASDLKDLGEVELNFFIG 522
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI F+P DF+ID+NGK+FAWQG+A LPF+DE +L L+ EE
Sbjct: 556 SPIHRFFPSDFEIDMNGKRFAWQGIAKLPFIDERKLLAQTKKLESTLTEEE 606
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
G+LT +G+V L++V+ +Q + + E++IF+KR + + F +MK + R+ Q+
Sbjct: 377 GYLTLAGEVFLDKVEHFIQCVAVYEEQIFQKRTRIQQAFDNNEEMKLKARRESSEVIQA 435
>gi|313232494|emb|CBY24162.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/428 (53%), Positives = 306/428 (71%), Gaps = 16/428 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL R+ S++V+CVE+ +E++G +P D S NPNG+EFDNLY+DMNG+IH
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+PAP++E+E+ IF+ +DR+ IVRPRKLLY+AIDG APRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE+ + +A + ++ G LPP K FDSNCITPGT FM RL+ L +YI
Sbjct: 121 AAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYIS 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN + GW+ + VILSDA+VPGEGEHKI+DYIRKQR P HDPNT HC+ GADADLIML
Sbjct: 181 ERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL-----DAEPNPESVITFGSE 295
GLATHEPNFTI+REEF + +PC +CGQ GHE+ +C+GL D EP V + G+
Sbjct: 241 GLATHEPNFTIVREEFVYGKPKPCVLCGQCGHELIDCLGLPEGVEDKEP---PVFSKGN- 296
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+IF+R++ +RE++ +EL +PN+P + E +DDW+ +CFFVGNDFLPHLPSL IREG
Sbjct: 297 --YIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSIREG 354
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENGGGGG-----RGVKRSFDDVDESSEEEESNDEVRL 410
A+D+LV +YK+TV + + + ++ R + R D + + +EE VR
Sbjct: 355 AIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRD 414
Query: 411 WEDGFKDR 418
+DR
Sbjct: 415 ERRKHQDR 422
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
++ DEVRL+EDG+KDRY+ +KFDV DD F+ V Y GLCWV YY+QGC W WY
Sbjct: 510 DAEDEVRLFEDGWKDRYFRTKFDVSADDNDFKRAVVGAYTEGLCWVFAYYFQGCLDWGWY 569
Query: 463 FPFHYAPFASDFINIAEVDTNFETGTQP 490
+P+HYAPFASDF+++ V+ N++ +P
Sbjct: 570 YPYHYAPFASDFVHLDSVEINWQRDAKP 597
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IID YP DF +DLNGKKF W GVALLPF+DE RLH+ LA Y L+ +E
Sbjct: 628 DSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDE 679
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 541 VSDNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVK 600
+ D+ LL V +L L +I + L G + M +Y +T G V
Sbjct: 327 IIDDWILLCFFVGNDFLPHLPSLSIREGAIDK--LVGIYKRTVCEMKSY---MTKDGTVN 381
Query: 601 LERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQ 660
L+ V+ +M+ +G MED IFKKR+Q E ++R++ +K ++R ++ G
Sbjct: 382 LKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRDERRKHQDRNKRLNRNQVHQTPVAKSGV 441
Query: 661 FAPQ 664
P+
Sbjct: 442 MEPK 445
>gi|313246745|emb|CBY35616.1| unnamed protein product [Oikopleura dioica]
Length = 853
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/428 (53%), Positives = 305/428 (71%), Gaps = 16/428 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL R+ S++V+CVE+ +E++G +P D S NPNG+EFDNLY+DMNG+IH
Sbjct: 1 MGVPAFFRWLQRRCGSIVVNCVEEPQKEIDGVTVPIDLSGANPNGVEFDNLYIDMNGVIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+PAP++E+E+ IF+ +DR+ IVRPRKLLY+AIDG APRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPRNEEEIFECIFDALDRMMNIVRPRKLLYLAIDGPAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE+ + +A + ++ G LPP K FDSNCITPGT FM RL+ L +YI
Sbjct: 121 AAKESVQLSELMAEKKLEIERAGGRLPPPDPKKEKFDSNCITPGTEFMDRLAKALRFYIS 180
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+RLN + GW+ + VILSDA+VPGEGEHKI+DYIRKQR P HDPNT HC+ GADADLIML
Sbjct: 181 ERLNKEAGWQELNVILSDASVPGEGEHKIIDYIRKQRNTPTHDPNTHHCIWGADADLIML 240
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL-----DAEPNPESVITFGSE 295
GLATHEPNFTI+REEF + +PC +CGQ GHE+ +C+GL D EP V G+
Sbjct: 241 GLATHEPNFTIVREEFVYGKPKPCVLCGQCGHELIDCLGLPEGVEDKEP---PVFLKGN- 296
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+IF+R++ +RE++ +EL +PN+P + E +DDW+ +CFFVGNDFLPHLPSL IREG
Sbjct: 297 --YIFIRIATVREWIAQELQIPNIPITWDLENIIDDWILLCFFVGNDFLPHLPSLSIREG 354
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENGGGGG-----RGVKRSFDDVDESSEEEESNDEVRL 410
A+D+LV +YK+TV + + + ++ R + R D + + +EE VR
Sbjct: 355 AIDKLVGIYKRTVCEMKSYMTKDGTVNLKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRD 414
Query: 411 WEDGFKDR 418
+DR
Sbjct: 415 ERRKHQDR 422
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 64/88 (72%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
++ DEVRL+EDG+KDRY+ +KFDV DD F+ V Y GLCWV YY+QGC W WY
Sbjct: 510 DAEDEVRLFEDGWKDRYFRTKFDVSADDNDFKRAVVGAYTEGLCWVFAYYFQGCLDWGWY 569
Query: 463 FPFHYAPFASDFINIAEVDTNFETGTQP 490
+P+HYAPFASDF+++ V+ N++ +P
Sbjct: 570 YPYHYAPFASDFVHLDSVEINWQRDAKP 597
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IID YP DF +DLNGKKF W GVALLPF+DE RLH+ LA Y L+ +E
Sbjct: 628 DSQIIDMYPTDFVVDLNGKKFEWMGVALLPFLDEARLHRTLAKVYGDLTEDE 679
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 541 VSDNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVK 600
+ D+ LL V +L L +I + L G + M +Y +T G V
Sbjct: 327 IIDDWILLCFFVGNDFLPHLPSLSIREGAIDK--LVGIYKRTVCEMKSY---MTKDGTVN 381
Query: 601 LERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQ 660
L+ V+ +M+ +G MED IFKKR+Q E ++R++ +K ++R ++ G
Sbjct: 382 LKAVEFVMRSIGRMEDAIFKKRRQEECQRRVRDERRKHQDRNKRLNRNQVHQTPVAKSGV 441
Query: 661 FAPQ 664
P+
Sbjct: 442 MEPK 445
>gi|326494150|dbj|BAJ85609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1014
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/523 (50%), Positives = 344/523 (65%), Gaps = 43/523 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E +P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAEEKEPVELEPGAFVPVDPRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +P+P DE+ +IF+ ID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPSPTTYDEVFKSIFDYIDHLFCLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R + A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRLEFEAEGRNL-VRKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KVILSD+NVPGEGEHKIM YIR QR P DPNT+H L G DADLIM
Sbjct: 180 QLRLNHSPGWQSVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHVLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNP-ESVITFGS--E 295
L LATHE +F+I+RE P Q C +CGQ+GH EC G P P ++V+ +
Sbjct: 240 LALATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECQG----PGPADNVVELPPIHK 295
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
++ F+ + VLREYLEK+L + + PF + ER LDD+VF+CFFVGNDFLPH+P+LEIREG
Sbjct: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINLERILDDFVFLCFFVGNDFLPHMPTLEIREG 355
Query: 356 AVDRLVNLYK-------------------KTVYKTQEQLRQEENGGGGGRGVKRSFDDVD 396
A++ L+N+Y+ + + Q EE +++++++ +
Sbjct: 356 AINLLMNIYRAEFKPMGGYLTDGGEVLLERVEHFIQAVAIHEEQIFRKRARIQKAYENNE 415
Query: 397 ES-------SEEEESNDEVRLWEDGFKDRYYESKF-----DVPKDDIAFRLMVGHEYVLG 444
+ SEE + D V+L E GF++RYY KF P D + + V +YV G
Sbjct: 416 DRRRAQGDISEENQYVDMVKLGEPGFRERYYAEKFREEAESKPIDQV--QRDVVQKYVEG 473
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
LCWV++YYYQG SW+W++P+HYAPFASD ++ E + F G
Sbjct: 474 LCWVMRYYYQGVCSWQWFYPYHYAPFASDLKSLTEFEITFFLG 516
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 531 AASSNALPKHY-GDLMTDPNSPLNYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 589
Query: 706 APYYEKLSVEE 716
+ L+ EE
Sbjct: 590 QKLEDTLTEEE 600
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
G+LTD G+V LERV+ +Q + + E++IF+KR + + ++ N +RR
Sbjct: 373 GYLTDGGEVLLERVEHFIQAVAIHEEQIFRKRARIQKAYE--NNEDRRR 419
>gi|125588231|gb|EAZ28895.1| hypothetical protein OsJ_12935 [Oryza sativa Japonica Group]
Length = 997
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/535 (49%), Positives = 346/535 (64%), Gaps = 58/535 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + VE++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G + + + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-SGQADKTVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+N+Y++ +V +EQ+ Q+ ++++
Sbjct: 359 LLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKR------ARIQKAIQ 412
Query: 394 DVDESSEEEESNDE----------------VRLWEDGFKDRYYESKFD-----VPKDDIA 432
+ +E + + N E V+L E G++ RYY KF P D +
Sbjct: 413 NNEERNRVQTENSEDNQYVDKAGFKTLGFPVKLGEPGYRVRYYAEKFKEEAELKPIDQV- 471
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ V +YV GLCWV++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 472 -QRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLG 525
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 540 AASSNALPKYY-GDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 598
Query: 706 APYYEKLSVEE 716
E L+ EE
Sbjct: 599 QKLEETLTDEE 609
>gi|125546024|gb|EAY92163.1| hypothetical protein OsI_13876 [Oryza sativa Indica Group]
Length = 997
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/535 (49%), Positives = 346/535 (64%), Gaps = 58/535 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + VE++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L KEK DSN ITPGTPFM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-VAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G + + + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-SGQADKTVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERVVDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+N+Y++ +V +EQ+ Q+ ++++
Sbjct: 359 LLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKR------ARIQKAIQ 412
Query: 394 DVDESSEEEESNDE----------------VRLWEDGFKDRYYESKFD-----VPKDDIA 432
+ +E + + N E V+L E G++ RYY KF P D +
Sbjct: 413 NNEERNRVQTENSEDNQYVDKAGFKTLGFPVKLGEPGYRVRYYAEKFKEEAELKPIDQV- 471
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ V +YV GLCWV++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 472 -QRDVVQKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLG 525
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 540 AASSNALPKYY-GDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 598
Query: 706 APYYEKLSVEE 716
E L+ EE
Sbjct: 599 QKLEETLTDEE 609
>gi|357441511|ref|XP_003591033.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355480081|gb|AES61284.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 1029
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 274/590 (46%), Positives = 360/590 (61%), Gaps = 68/590 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP I VED + P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSISDVVED-----DDVPSPIDASKPNPNGIEFDNLYLDMNGIIH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ KP+P DE+ +F+ +D LF +VRPRKLLY+A DGVAPRAKMNQQRSRRFR
Sbjct: 56 PCFHPDGKPSPATYDEVFKLVFDYVDHLFSLVRPRKLLYLATDGVAPRAKMNQQRSRRFR 115
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ AE AE R+R++ + +G +L K+K DSN ITPGT FMA LS L YY+
Sbjct: 116 AAKDAAEAEAEEERLRKEFVEEGALLS-SKDKPETSDSNVITPGTKFMASLSVALQYYVQ 174
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN++P WK IKVILSD+NVPGEGEHKIM+YIR QR P +PNT+HCL G DADLIML
Sbjct: 175 TRLNHNPAWKNIKVILSDSNVPGEGEHKIMEYIRLQRNIPGFNPNTRHCLYGLDADLIML 234
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVG---LDAE-PNPESVITFGSEV 296
LATHE +F+I+RE C VCGQ GH +C G AE NP I +
Sbjct: 235 SLATHEVHFSILREVITLPGQDKCFVCGQAGHFAADCHGKPETKAEDGNPADEIPIHKK- 293
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++ F+ + VLREYL+ EL +PN PF FER +DD+VF+CFFVGNDFLPH+P+LEIREGA
Sbjct: 294 KYQFLNIWVLREYLQYELEIPNPPFEIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA 353
Query: 357 VDRLVNLYKK-------------------------TVYKTQEQLRQE----ENGGGGGRG 387
++ L+++Y+K +V ++Q+ Q+ +
Sbjct: 354 INLLMHIYRKEFTAMGGYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRVQQVAENNEE 413
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF--------DVPKDDIAFRLMVGH 439
++ V +D+V+L E G+K+RYY KF D K DI +
Sbjct: 414 MRARVRGVILQEPRASFSDKVKLGEPGYKERYYAEKFGASSLEEIDKVKKDIVLK----- 468
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRIL-- 497
YV GLCWV +YYY G SWKWY+P+HYAPFASD ++ ++ F G ++++
Sbjct: 469 -YVEGLCWVCQYYYNGVCSWKWYYPYHYAPFASDLKDLPNLEIIFSPGEPFKPFDQLMGV 527
Query: 498 ----KFILYHFDNKMFFWNKSLINIAEVDTNFETGTQPVNNRILKFYVSD 543
+F LYH +S+++ A D + T P ++ I FY +D
Sbjct: 528 LPASRFFLYHVL-------RSILSNALPDKYRDLMTDP-SSPIFHFYPAD 569
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI FYP DF+ID+NGK+FAWQGVA LPF+DE++L A + L+++E E
Sbjct: 559 SSPIFHFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLAATRKLEDTLTMQEEE 612
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKR 638
G+LT +G+V L+RV+ +Q + + ED+IF+KR + + + + +M+ R
Sbjct: 370 GYLTYAGEVFLDRVEYFIQSVAVHEDQIFQKRVRVQQVAENNEEMRAR 417
>gi|357111459|ref|XP_003557530.1| PREDICTED: 5'-3' exoribonuclease 4-like [Brachypodium distachyon]
Length = 992
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 255/521 (48%), Positives = 339/521 (65%), Gaps = 38/521 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPQTVSDAAEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +P+P D++ +IF+ ID LF +VRPRKL+YMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPSPTTYDQVFKSIFDYIDHLFCLVRPRKLVYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R A+G L +K+K DSN ITPGT FM LS+ L YYI
Sbjct: 121 RAAKDAADAAAEEERLRLDFEAEGRTL-VQKQKSEAIDSNVITPGTQFMFVLSSALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ PGW+ +KV+LSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G N + + ++
Sbjct: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGPAQADNVVELPPIHKK-KY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYLEK+L + + PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLEKDLEIVDPPFKINFERIVDDFVFICFFVGNDFLPHMPTLEIREGALN 358
Query: 359 RLVNLYK-------------------KTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESS 399
L+ +Y+ + + Q EE +++++++ +E
Sbjct: 359 LLMAIYRSEFKPMGGYLTDGGEVLLERVEHFIQSVAVHEEQIFRKRARIQQAYENNEERR 418
Query: 400 EEEESNDE--------VRLWEDGFKDRYYESKF-----DVPKDDIAFRLMVGHEYVLGLC 446
+ + N E V+L E G+++RYY KF P D + + V +YV GLC
Sbjct: 419 KGQRENSEDVNPYVDMVKLGEPGYRERYYAEKFREEAESKPIDQV--QRDVVQKYVEGLC 476
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WV++YYYQG SW+W++P+HYAPFASD + E + F G
Sbjct: 477 WVMRYYYQGVCSWQWFYPYHYAPFASDLKGLTEFEITFFLG 517
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA S P + G +SP+ FYP+DF+ID+NGK+FAWQG+A LPF+DE RL
Sbjct: 532 AASSNALPKYY-GDLMTDPNSPLKYFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAET 590
Query: 706 APYYEKLSVEE 716
+ L+ EE
Sbjct: 591 QKVEDSLTEEE 601
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
G+LTD G+V LERV+ +Q + + E++IF+KR + + ++ N+ +++ +R+
Sbjct: 373 GYLTDGGEVLLERVEHFIQSVAVHEEQIFRKRARIQQAYE-NNEERRKGQRE 423
>gi|356505926|ref|XP_003521740.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 960
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 268/529 (50%), Positives = 340/529 (64%), Gaps = 48/529 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP I VE++P +G D SKPNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSIADVVEEEPSVGSGA---VDVSKPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ K AP +++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKSAPTTYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAE-----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
A+K+ AEK A + R+RE+ + +L K K +DSN ITPGTPFM LS L
Sbjct: 118 AAKDAAEKDAAEAEAEIERLREEFEGEMKLLS-SKVKPETYDSNVITPGTPFMGVLSVAL 176
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YYI RLN +PGW+ KVILSD+NVPGEGEHKIMDYIR QR P +PNT+HCL G DA
Sbjct: 177 QYYIQTRLNYNPGWRNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDA 236
Query: 236 DLIMLGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEP----NPESVI 290
DLIML LATHE +F+I+RE P Q C CGQ+GH EC G E NP
Sbjct: 237 DLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQVGHFAAECRGKPGEKAEDWNPVDDT 296
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+ ++ F+ + VLREYL+ E+ +PN PF FER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 297 PIHKK-KYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTL 355
Query: 351 EIREGAVDRLVNLYKKTV-----YKTQ---------EQLRQEENGGGGGRGVKR-SFDDV 395
EIREGAV+ L+++Y+K Y T+ E Q +KR
Sbjct: 356 EIREGAVNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQA 415
Query: 396 DESSEEEESN--------------DEVRLWEDGFKDRYYESKF---DVPKDDIAFRLMVG 438
E +EE ++ D+V+L E G+K+RYY KF D+ K + + V
Sbjct: 416 TEINEEMKARARGEMPGEPRASVLDKVKLGEPGYKERYYAEKFGALDLEKIEKIKKDTV- 474
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV +YYYQG SW+WY+P+HYAPFASD ++A+++ F G
Sbjct: 475 LKYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLG 523
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI+ FYP DF+ID+NGK+FAWQGVA LPF+DE++L A + L+ EE
Sbjct: 557 SPILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEE 607
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
G+LT++G+V LERV+ +Q + + ED+IF KR + + ++ +MK R +M
Sbjct: 378 GYLTEAGEVFLERVEHFIQSVAVHEDQIFLKRVRIQQATEINEEMKARARGEM 430
>gi|356573066|ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
Length = 957
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/528 (49%), Positives = 335/528 (63%), Gaps = 48/528 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP I VE+ P D SKPNP+GMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLSITDVVEEDPSAGA-----VDVSKPNPSGMEFDNLYLDMNGIIH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ KPAP +++ +IF+ ID +F +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 56 PCFHPDGKPAPATYEDVFKSIFDYIDHIFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFR 115
Query: 121 ASKETAEKIAE-----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
A+K+ AEK A + R+RE+ + +L K+K +DSN ITPGTPFM LS L
Sbjct: 116 AAKDAAEKDAAEAEAEIERLREEFEGEMKLLS-SKDKPETYDSNVITPGTPFMGVLSVAL 174
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YYI RLN +PGW KVILSD+NVPGEGEHKIMDYIR QR P +PNT+HCL G DA
Sbjct: 175 QYYIQTRLNYNPGWWNTKVILSDSNVPGEGEHKIMDYIRLQRNLPGFNPNTRHCLYGLDA 234
Query: 236 DLIMLGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEP----NPESVI 290
DLIML LATHE +F+I+RE P Q C CGQ+GH EC G E NP
Sbjct: 235 DLIMLSLATHEVHFSILREVITFPGQQEKCFQCGQLGHFAAECRGKPGEKAEDWNPVDDT 294
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+ ++ F+ + VLREYL+ E+ +PN PF FER +DD+VF+CFFVGNDFLPH+P+L
Sbjct: 295 PIHKK-KYQFLNIWVLREYLQYEMEIPNPPFEIDFERIVDDFVFLCFFVGNDFLPHMPTL 353
Query: 351 EIREGAVDRLVNLYKKTV-----YKTQ-------------EQLRQEENGGGGGRGVKRSF 392
EIREGA++ L+++Y+K Y T+ + + E+ R +
Sbjct: 354 EIREGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQA 413
Query: 393 DDVDESSEEEESN-----------DEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGH 439
+++E + D+V+L E G+K+RYY KF P+ +
Sbjct: 414 TEINEEMKARARGDMPGEPRASVLDKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDTVL 473
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV +YYYQG SW+WY+P+HYAPFASD ++A+++ F G
Sbjct: 474 KYVEGLCWVCRYYYQGVCSWQWYYPYHYAPFASDLKDLADLEITFFLG 521
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S I+ FYP DF+ID+NGK+FAWQGVA LPF+DE++L A + L+ EE
Sbjct: 555 SSILQFYPADFEIDMNGKRFAWQGVAKLPFIDEKKLLSATSKLEATLTEEE 605
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
G+LT++G+V LERV+ +Q + + ED+IF+KR + + ++ +MK R M
Sbjct: 376 GYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQATEINEEMKARARGDM 428
>gi|147793034|emb|CAN59715.1| hypothetical protein VITISV_006076 [Vitis vinifera]
Length = 1102
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/544 (44%), Positives = 330/544 (60%), Gaps = 67/544 (12%)
Query: 5 AFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTH 64
AF+RWL+ +YP +V+ VED+P VNG + D+++PNPNG EFDNLYLDMNGIIHPC H
Sbjct: 136 AFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIHPCFH 195
Query: 65 PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKE 124
PE PAPK ++ A+F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFRA+KE
Sbjct: 196 PEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFRAAKE 255
Query: 125 TAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLN 184
A+ + R++ ++ +L ++ DSN ITPGT FMA LS+ L YYIH R+N
Sbjct: 256 AADDASGTERLKTVFESEMEML-ALLDQTKKLDSNVITPGTEFMALLSSALKYYIHLRMN 314
Query: 185 NDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLAT 244
DPGW+GIKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML LAT
Sbjct: 315 LDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLALAT 374
Query: 245 HEPNFTIIREEF-------KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
HE +F+I+RE+ K N+ R + K+ E E + F S +
Sbjct: 375 HEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGXSKQ-----GEVGGEDIEDFISRQK 429
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F F+ + LR+YL ++++P+ ER +DD+VFMC FVGNDFLPH+PSLEI EGA+
Sbjct: 430 FQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEISEGAI 489
Query: 358 DRLVNLYKK--------------------------------TVYKTQEQLRQEENGGGGG 385
D L+ +YKK +++ + Q++++ G
Sbjct: 490 DLLMTVYKKEFVQIGGYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQG 549
Query: 386 RGVKRSFDDVDESSEEE--------------------ESNDEVRLWEDGFKDRYYESKFD 425
K++ D + E + + ++L EDG+K+R+Y KF+
Sbjct: 550 SSNKKTVSDYSTTPCVEPQGMTGSSGSSLEPRKTPFCQDSKNIKLGEDGWKERFYVEKFE 609
Query: 426 VPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
+D R+ +Y+ G+CWV+ YYYQG SW+W++P+HYAPFASD + ++D
Sbjct: 610 AKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFYPYHYAPFASDIYGLDQLDIQ 669
Query: 484 FETG 487
F G
Sbjct: 670 FTLG 673
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYY 709
+ SPI+DFYP DF++D+NGK++ WQ + P +D R P +
Sbjct: 709 ETSPILDFYPADFELDMNGKRYPWQ-LGETPCLDFSRASMIAQPVW 753
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+S +V LERV+ MQ +G E+ IF+KR Q + +R + + K + +
Sbjct: 505 GYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQKKRGVRFQGSSNK----KTVSDYS 560
Query: 651 KAPSFIPGGQFAPQDSPI 668
P P G S +
Sbjct: 561 TTPCVEPQGMTGSSGSSL 578
>gi|406861589|gb|EKD14643.1| 5'->3' exoribonculease Dhp1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 988
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/373 (58%), Positives = 281/373 (75%), Gaps = 7/373 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP +I + +E++P+E++GQ+IP D+ PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSQKYPKIISNVIEEQPREIDGQEIPIDTRGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+PAPKDE+EMM+AIF+ DR+ +VRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPAPKDEEEMMLAIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+++E EK A+ A + + L + G I PE +K +DSN ITPGTPFM L+A L Y+I
Sbjct: 121 SAQEAQEKEADKAELLKMLKSQGGHIEEPEIKKA--WDSNEITPGTPFMDILAASLRYWI 178
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+LN DP W +KVI+SD+ VPGEGEHKIM++IR QR+ P HDPNT+H + G DADLIM
Sbjct: 179 AYKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPHHDPNTRHVIYGLDADLIM 238
Query: 240 LGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE--SVITFGSE 295
LGL THEP+F ++RE+ + P C +CGQ GHE +EC G + E + +
Sbjct: 239 LGLGTHEPHFRVLREDVFAQERGPRLCRLCGQAGHEARECTGKAKVKDGEFDEKASAPAL 298
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
FI++ +SVLREYL EL +P+ P+ + ERA+DDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 299 KPFIWLHVSVLREYLAAELYVPDQPYRFDLERAIDDWVFMCFFVGNDFLPHLPSLEIREN 358
Query: 356 AVDRLVNLYKKTV 368
+D L+ +++ +
Sbjct: 359 GIDTLIAIWRDNI 371
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 60/80 (75%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLW++G+ DRYYE KF DIAFR V YV GL WVL YY+QGC SW+WY+P+HY
Sbjct: 567 VRLWDEGYADRYYEQKFGADPSDIAFRHKVAKAYVEGLAWVLLYYFQGCPSWEWYYPYHY 626
Query: 468 APFASDFINIAEVDTNFETG 487
APFA+DF N++++ +FE G
Sbjct: 627 APFAADFANLSDIKISFEKG 646
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 40/51 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVE 715
+S IIDFYPEDF +DLNGKKFAWQGVALLPF+D +RL A+A Y L E
Sbjct: 679 ESEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSDRLLSAMAKKYPMLPPE 729
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKK 637
G+LT G V LER Q I+ L ED IF++R+QTE + K +K
Sbjct: 376 GYLTKDGHVDLERAQFILDGLAKQEDAIFRRRKQTEDRREAGAKRRK 422
>gi|296423651|ref|XP_002841367.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637604|emb|CAZ85558.1| unnamed protein product [Tuber melanosporum]
Length = 883
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 237/526 (45%), Positives = 316/526 (60%), Gaps = 85/526 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWL+ KYP ++ +E++PQE++G D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTNKYPKIVSPVIEEQPQEIDGVVRAVDTTQPNPNG-ESDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+ P E+ MM+A+F +R+ +VRP KLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPEEGEPPATEEAMMLAVFAYTERVVNMVRPNKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E EK E A++ E++ G + +DSN ITPGTPFM L+A L Y+I
Sbjct: 120 SAQEAKEKEDETAQLIEQMEKHGSKFDDVIKNKKIWDSNAITPGTPFMDILAASLKYWIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+LN+DP W +K+I+SD+ VPGEGEHKIM++IR QR P++DPNT+H + G DADLIML
Sbjct: 180 KKLNDDPAWAKLKIIISDSTVPGEGEHKIMEFIRSQRLSPEYDPNTRHVIYGLDADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GL THEP+F ++RE+ +AR K C +A P
Sbjct: 240 GLGTHEPHFKVLREDVFAKEAR-----------AKTCRIYNASP---------------- 272
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
L+ + E ERALDDW+FMCFFVGNDFLPHLPSLEIRE +D L
Sbjct: 273 -----LKPFFE-------------LERALDDWIFMCFFVGNDFLPHLPSLEIRENGIDTL 314
Query: 361 VNLYKKTV-----YKTQEQL--------------RQEE----------NGGGGGRGVKRS 391
+ ++K + Y T++ +QE+ + KR
Sbjct: 315 IAVWKDNIPLMGGYVTKDGTVDLKRVQYILDGLAKQEDQIFRNRKRTISTTAPAISHKRK 374
Query: 392 FDDV----------DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
D V ES ++ D VRLWE G+++RYYE KF V D++ FR V Y
Sbjct: 375 ADMVWGDETPKTPGSESEADDPDRDPVRLWEPGYRERYYEQKFHVSPDNVEFRNKVAASY 434
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V GLCWVL YY+QGC SW WY+P+HYAPFA DF ++ ++D F+ G
Sbjct: 435 VEGLCWVLLYYFQGCPSWTWYYPYHYAPFAQDFNDVGKLDIQFKKG 480
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS IIDFYPE F IDLNGKKFAWQGVALLPF+DE+RL A++ Y L+ E+
Sbjct: 512 EDSEIIDFYPESFPIDLNGKKFAWQGVALLPFIDEKRLLDAVSKVYPTLTPED 564
>gi|293333211|ref|NP_001170327.1| uncharacterized protein LOC100384297 [Zea mays]
gi|224035107|gb|ACN36629.1| unknown [Zea mays]
gi|413932823|gb|AFW67374.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 490
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/492 (50%), Positives = 326/492 (66%), Gaps = 33/492 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP + E++P E+ G +P D +PNPNG+EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPLTVSDAEEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE +PAP DE+ +IF+ ID LF ++RPRKLLYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGRPAPTTYDEVFKSIFDYIDHLFGLIRPRKLLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+R++ A+G L +KEK DSN ITPGT FM LS L YYI
Sbjct: 121 RAAKDAADAAAEEERLRKEFEAEGRTL-AQKEKSEAIDSNVITPGTEFMFVLSTALQYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN+ GW+ +K+ILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QLRLNHTLGWQSVKIILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LATHE +F+I+RE P Q C +CGQ+GH EC G ++P+ + + ++
Sbjct: 240 LALATHEVHFSILREVISMPGQHEKCFLCGQVGHLAAECRG-PSQPDNSVELPPIHKKKY 298
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
F+ + VLREYL K+L + + PF +FER +DD+VFMCFFVGNDFLPH+P+LEIREGA++
Sbjct: 299 QFLNIWVLREYLAKDLEIIDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAIN 358
Query: 359 RLVNLYK-------------------------KTVYKTQEQLRQEENGGGGGRGVKRSFD 393
L+++Y+ ++V +EQ+ Q+ R
Sbjct: 359 LLMSIYRSEFTSMGGYLTDVGEVILDRVEHFIQSVAVNEEQIFQKRARIQQARENNEEKH 418
Query: 394 DVD-ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD---IAFRLMVGHEYVLGLCWVL 449
+ E+SEE++ D+V+L E G+++RYY KF + + R V +YV GLCWV+
Sbjct: 419 KMQRENSEEDQYVDKVKLGEPGYRERYYADKFKEEAESKPIVQVRRDVVQKYVEGLCWVM 478
Query: 450 KYYYQGCRSWKW 461
+YYYQG SW+W
Sbjct: 479 RYYYQGVCSWQW 490
>gi|392870672|gb|EAS32493.2| 5'-3' exoribonuclease 2 [Coccidioides immitis RS]
Length = 1016
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/388 (57%), Positives = 285/388 (73%), Gaps = 8/388 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G++ P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KPAP +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ P+HD NT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 TPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEEN 380
RE +D L+ +++ + L Q+ N
Sbjct: 361 RENGIDTLIAIWRDNIPLMGGYLTQDGN 388
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 389 KRSFD--DVDESSEEEESN-----------DEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
KR D + D ++E+E+S D VRLWE G+ DRYYE KF V DI FR
Sbjct: 542 KRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQKFHVDPKDIEFRH 601
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GLCWVL YY+QGC SW WY+P+HYAPFA+DF+++ +D F G
Sbjct: 602 KVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHMDIQFHKGA 654
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE RL +A+A Y +LS EE
Sbjct: 686 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEE 737
>gi|320038785|gb|EFW20720.1| 5'-3' exoribonculease Dhp1 [Coccidioides posadasii str. Silveira]
Length = 1016
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/388 (57%), Positives = 285/388 (73%), Gaps = 8/388 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G++ P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KPAP +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ P+HD NT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 TPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEEN 380
RE +D L+ +++ + L Q+ N
Sbjct: 361 RENGIDTLIAIWRDNIPLMGGYLTQDGN 388
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 389 KRSFD--DVDESSEEEESN-----------DEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
KR D + D ++E+E+S D VRLWE G+ DRYYE KF V DI FR
Sbjct: 542 KRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQKFHVDPKDIEFRH 601
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GLCWVL YY+QGC SW WY+P+HYAPFA+DF+++ +D F G
Sbjct: 602 KVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHMDIQFHKGA 654
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE RL +A+A Y +LS EE
Sbjct: 686 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEE 737
>gi|119186689|ref|XP_001243951.1| hypothetical protein CIMG_03392 [Coccidioides immitis RS]
Length = 1031
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/388 (57%), Positives = 285/388 (73%), Gaps = 8/388 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G++ P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 16 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 75
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KPAP +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 76 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 135
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 136 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 195
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ P+HD NT+H + G DAD
Sbjct: 196 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 255
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH + C G E N E G
Sbjct: 256 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRG 315
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 316 TPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 375
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEEN 380
RE +D L+ +++ + L Q+ N
Sbjct: 376 RENGIDTLIAIWRDNIPLMGGYLTQDGN 403
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 389 KRSFD--DVDESSEEEESN-----------DEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
KR D + D ++E+E+S D VRLWE G+ DRYYE KF V DI FR
Sbjct: 557 KRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQKFHVDPKDIEFRH 616
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GLCWVL YY+QGC SW WY+P+HYAPFA+DF+++ +D F G
Sbjct: 617 KVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHMDIQFHKGA 669
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE RL +A+A Y +LS EE
Sbjct: 701 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEE 752
>gi|303317580|ref|XP_003068792.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240108473|gb|EER26647.1| XRN 5'-3' exonuclease N-terminus domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 1016
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/388 (57%), Positives = 285/388 (73%), Gaps = 8/388 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G++ P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEIDGEEFPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KPAP +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPAPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK AE A+ +R++ G + E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRQQNRGKGDMEIAEEVVQKTWDSNVITPGTPFMDILSAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ P+HD NT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKVKIIISDATVPGEGEHKIMEFIRSQRSCPEHDANTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQQGHVAEACTGKAKEKNGEFDEKQRG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 TPLKPFIWLHVSVLREYLAAEMYVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEEN 380
RE +D L+ +++ + L Q+ N
Sbjct: 361 RENGIDTLIAIWRDNIPLMGGYLTQDGN 388
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 70/113 (61%), Gaps = 13/113 (11%)
Query: 389 KRSFD--DVDESSEEEESN-----------DEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
KR D + D ++E+E+S D VRLWE G+ DRYYE KF V DI FR
Sbjct: 542 KRKADALETDNTTEQEDSERPPQEQDELPADSVRLWEQGYADRYYEQKFHVDPKDIEFRH 601
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GLCWVL YY+QGC SW WY+P+HYAPFA+DF+++ +D F G
Sbjct: 602 KVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLEHMDIQFHKGA 654
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE RL +A+A Y +LS EE
Sbjct: 686 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDESRLLEAMAKRYPRLSEEE 737
>gi|225681905|gb|EEH20189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1044
Score = 453 bits (1165), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/376 (57%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE+NGQ++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E+EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ C E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +KVI+SDA VPGEGEHKIM++IR QR+ P+HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SSLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 389 KRSFDDVDESSEEEESN------------DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
KR D +D +E E + D VRLWE+G+ DRYYE KF V DI FR
Sbjct: 541 KRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQKFQVHPKDIEFRHK 600
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GL WVL YY+QGC SW WY+P+HYAPFA+DF+ + +++ F G
Sbjct: 601 VARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGKMNIEFNRGA 652
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 684 NSEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEE 735
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|258563400|ref|XP_002582445.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
gi|237907952|gb|EEP82353.1| 5'-3' exoribonuclease 2 [Uncinocarpus reesii 1704]
Length = 1028
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/376 (58%), Positives = 278/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE NG++IP D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIISAVVEELPQEFNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK AE A+ +R++ G E+ +DSN ITPGTPFM LSA L
Sbjct: 121 SAQEAKEADEKKAEFAKLLRKQNRGKGDTELAEEVVNKTWDSNVITPGTPFMDILSAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCSEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E + E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCRLCGQQGHVAEACTGKAKEKSGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 SPLKPFIWLHVSVLREYLAAEMFVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 64/90 (71%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ E++ D VRLWE G+ DRYYE KF+V DI FR V YV GLCWVL YY+QGC
Sbjct: 567 ADEDQLPEDSVRLWEQGYADRYYEQKFNVDPKDIEFRHKVAKSYVEGLCWVLLYYFQGCP 626
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW WY+P+HYAPFA+DF+++ ++D F G
Sbjct: 627 SWTWYYPYHYAPFAADFVDLDQMDIQFNKG 656
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 42/51 (82%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFYPEDF IDLNGKKFAWQGVALLPF+DE+RL A+A Y +L+ E
Sbjct: 690 SEIIDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLAAMAKRYHRLTEAE 740
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
G+LT G V L+R QLI+Q L ED IF++R+QTE K +K +ERQ
Sbjct: 381 GYLTKDGHVDLKRAQLILQGLAKQEDAIFRRRRQTEERRNANAKRRKEQERQ 432
>gi|338719282|ref|XP_001489345.3| PREDICTED: 5'-3' exoribonuclease 2 isoform 1 [Equus caballus]
Length = 874
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 245/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 352 DQPAFTPGGILTPH 365
>gi|449452066|ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/374 (61%), Positives = 276/374 (73%), Gaps = 13/374 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P ++G IP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ + AE R+RE+ +G LPP KE+ FDSN ITPGT FMA LS L YY+H
Sbjct: 121 AAKDAIDAAAEETRLREEFEKEGRKLPP-KEESQVFDSNVITPGTDFMAVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 IRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-- 297
LATHE +F+I+RE F P Q C +CGQMGH +C G + E F +VE
Sbjct: 240 ALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGE----FDEKVEEV 295
Query: 298 -----FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ F+ + LREYLE E+ +PN PF ER +DD+VFMCFFVGNDFLPH+P+LEI
Sbjct: 296 TIKKPYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEI 355
Query: 353 REGAVDRLVNLYKK 366
REGA++ L+ +YKK
Sbjct: 356 REGAINLLLAVYKK 369
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGL 445
V R DV S++ EE D+++L G+++RYY KF + P++ R V Y GL
Sbjct: 534 VLREKSDVFNSNKSEE--DKIKLGVPGWRERYYNEKFSANTPEELDDIRNDVVLRYTEGL 591
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YYY+G SW+W++P+HYAPFASD + E++ +F GT
Sbjct: 592 CWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNISFNLGT 634
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 42/54 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
Q+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL +A L+ EE+
Sbjct: 665 QNSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDETRLLAEVAKVEHTLTEEEA 718
>gi|296200320|ref|XP_002747536.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Callithrix jacchus]
Length = 874
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 245/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 338
>gi|345789898|ref|XP_003433291.1| PREDICTED: 5'-3' exoribonuclease 2 [Canis lupus familiaris]
Length = 874
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 245/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE++
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEETK 599
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 352 DQPAFSPGGILTPH 365
>gi|358342156|dbj|GAA49686.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 314
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/285 (73%), Positives = 240/285 (84%), Gaps = 2/285 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN--GQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAFFRWLS KYPS++ HCVE + ++ G + P D+++PNPNG EFDNLYLDMNGI
Sbjct: 1 MGVPAFFRWLSMKYPSIVSHCVEKRGPILDNQGTRGPVDTTEPNPNGQEFDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPCTHPE KPAPK+E EM VAIFE IDRLF I+RPR++LYMAIDGVAPRAKMNQQRSRR
Sbjct: 61 IHPCTHPESKPAPKNEAEMFVAIFEYIDRLFAIIRPRRILYMAIDGVAPRAKMNQQRSRR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+KE EK + R+R +L A G LPP K + HFDSNCITPGTPFMARL+ L YY
Sbjct: 121 FRAAKEAKEKHMTIERLRNELQARGAHLPPAKSEEEHFDSNCITPGTPFMARLAVALRYY 180
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+DRLN+DPGWK I V LSDANVPGEGEHKIMD+IR+QR+ PDHD NT+HCLCGADADLI
Sbjct: 181 IYDRLNSDPGWKNIMVFLSDANVPGEGEHKIMDFIRRQRSAPDHDANTRHCLCGADADLI 240
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE 283
MLGLATHEP FTIIREEFKPNQ +PCD+CGQ+GHEM++CVG E
Sbjct: 241 MLGLATHEPYFTIIREEFKPNQPKPCDLCGQIGHEMEDCVGAPKE 285
>gi|403283599|ref|XP_003933202.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 874
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/299 (73%), Positives = 245/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 338
>gi|70995976|ref|XP_752743.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|74630336|sp|Q8TFZ1.4|XRN2_ASPFU RecName: Full=5'-3' exoribonuclease 2
gi|44889966|emb|CAD29606.2| 5'->3'exoribonuclease, putative [Aspergillus fumigatus]
gi|66850378|gb|EAL90705.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus Af293]
gi|159131498|gb|EDP56611.1| 5'->3' exoribonculease Dhp1 [Aspergillus fumigatus A1163]
Length = 1058
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/377 (58%), Positives = 281/377 (74%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E+ P EVNG++IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEVNGEEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMMV IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLA--DGCILPPEKEK---GSHFDSNCITPGTPFMARLSACL 175
+++E E + R K+LA +G + E ++ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFR-KMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASL 179
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QRA P+HDPNT+H + G DA
Sbjct: 180 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDA 239
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N E
Sbjct: 240 DLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQK 299
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
GS ++ FI++ +S+LREYL EL +P+ PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+
Sbjct: 300 GSSLKPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L+ +++ +
Sbjct: 360 IRENGIDTLIAIWRDNI 376
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 62/91 (68%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ E+E D VRLWE+G+ DRYYE KF V D FR V Y GL WVL YY+QGC
Sbjct: 587 AKEDELPPDTVRLWEEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCP 646
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I +++ F+ G
Sbjct: 647 SWTWYYPYHYAPFAADFVDIGDMEITFDKGV 677
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y L+ +E
Sbjct: 709 DSEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDE 760
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+ G V L+R QLI+Q L ED IF++R+Q E K+ N +KRR+++ K +
Sbjct: 381 GYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER-KLAN--EKRRKQEAKAREEER 437
Query: 651 KAPSFIPGGQFAPQDSPI 668
+ P DSP+
Sbjct: 438 ARKRRRSSPTYEPMDSPV 455
>gi|169763218|ref|XP_001727509.1| 5'-3' exoribonuclease 2 [Aspergillus oryzae RIB40]
gi|238489103|ref|XP_002375789.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
gi|115311954|sp|Q2UCP5.3|XRN2_ASPOR RecName: Full=5'-3' exoribonuclease 2
gi|83770537|dbj|BAE60670.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698177|gb|EED54517.1| 5'->3' exoribonculease Dhp1 [Aspergillus flavus NRRL3357]
Length = 1035
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/382 (55%), Positives = 279/382 (73%), Gaps = 22/382 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E++P EVNG++IP D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH----------FDSNCITPGTPFMAR 170
+++E E + R++ L +K KG +DSN ITPGTPFM
Sbjct: 121 SAQEAKEADEKKEEFRKQFL--------KKSKGDQEIHEEVIQKTWDSNVITPGTPFMDI 172
Query: 171 LSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
L+A L Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H +
Sbjct: 173 LAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVI 232
Query: 231 CGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE- 287
G DADLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N +
Sbjct: 233 YGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQF 292
Query: 288 SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
G+ ++ FI++ +S+LREYL EL +P+ PFP+ ERALDDWVFMCFFVGNDFLPH
Sbjct: 293 DEKGKGTSLKPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPH 352
Query: 347 LPSLEIREGAVDRLVNLYKKTV 368
LPSL+IRE +D L+ +++ +
Sbjct: 353 LPSLDIRENGIDTLIAIWRDNI 374
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S ++E D VRLWE+G+ DRYYE KF V D FR V Y GL WVL YY+QGC
Sbjct: 575 SKDDEMPPDTVRLWEEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCP 634
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I +++ +FE GT
Sbjct: 635 SWNWYYPYHYAPFAADFVDIGDMELSFEKGT 665
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y LS +E
Sbjct: 697 ESEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDE 748
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE 640
G+LT G V+ ++ QLI+Q L ED IF++R+Q E K+ N+ +++ E
Sbjct: 379 GYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEK-KLANEKRRKEE 427
>gi|391869656|gb|EIT78851.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1035
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/382 (55%), Positives = 279/382 (73%), Gaps = 22/382 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E++P EVNG++IP D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEQIPVDTTRPNPNGEELDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFNYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH----------FDSNCITPGTPFMAR 170
+++E E + R++ L +K KG +DSN ITPGTPFM
Sbjct: 121 SAQEAKEADEKKEEFRKQFL--------KKSKGDQEIHEEVIQKTWDSNVITPGTPFMDI 172
Query: 171 LSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
L+A L Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H +
Sbjct: 173 LAASLRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVI 232
Query: 231 CGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE- 287
G DADLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N +
Sbjct: 233 YGLDADLIMLGLATHEPHFRVLREDVFFQESKARTCHLCGQAGHKAEECRGQAKEKNGQF 292
Query: 288 SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
G+ ++ FI++ +S+LREYL EL +P+ PFP+ ERALDDWVFMCFFVGNDFLPH
Sbjct: 293 DEKGKGTSLKPFIWLNVSILREYLAVELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPH 352
Query: 347 LPSLEIREGAVDRLVNLYKKTV 368
LPSL+IRE +D L+ +++ +
Sbjct: 353 LPSLDIRENGIDTLIAIWRDNI 374
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S ++E D VRLWE+G+ DRYYE KF V D FR V Y GL WVL YY+QGC
Sbjct: 575 SKDDEMPPDTVRLWEEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCP 634
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I +++ +FE GT
Sbjct: 635 SWNWYYPYHYAPFAADFVDIGDMELSFEKGT 665
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y LS +E
Sbjct: 697 ESEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLSDDE 748
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE 640
G+LT G V+ ++ QLI+Q L ED IF++R+Q E K+ N+ +++ E
Sbjct: 379 GYLTKDGHVEFKKAQLILQGLAKQEDAIFRRRRQVEEK-KLANEKRRKEE 427
>gi|121701237|ref|XP_001268883.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
gi|119397026|gb|EAW07457.1| 5'->3' exoribonculease Dhp1 [Aspergillus clavatus NRRL 1]
Length = 1043
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/377 (57%), Positives = 278/377 (73%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E+ P EVNG++IP D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEELPYEVNGEEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMMV IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-----FDSNCITPGTPFMARLSACL 175
+++E E + R K+LA ++E +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAREADEKKEEFR-KMLAKQNGNKADQELHEEVIQKTWDSNVITPGTPFMDILAASL 179
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H + G DA
Sbjct: 180 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRAAPEHDPNTRHVIYGLDA 239
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ ++ R C++CGQ GH+ +EC G E N E
Sbjct: 240 DLIMLGLATHEPHFRVLREDVFFQESRPRTCNLCGQPGHKAEECRGQAKEKNGEFDEKQK 299
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
GS ++ FI++ +SVLREYL EL +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+
Sbjct: 300 GSSLKPFIWLHVSVLREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L+ +++ +
Sbjct: 360 IRENGIDTLIAIWRDNI 376
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ E+E D VRLWE+G+ DRYY KF V +D FR V Y GL WVL YY+QGC
Sbjct: 581 AKEDELPPDTVRLWEEGYADRYYAQKFGVGPEDKEFRHKVARAYAEGLAWVLLYYFQGCP 640
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW WYFP+HYAPFA+DF++I +++ +F+ G
Sbjct: 641 SWTWYFPYHYAPFAADFVDIGDMEISFDKG 670
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE RL A+ Y LS +E
Sbjct: 704 SEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDERRLLAAMEKKYPLLSEDE 754
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+ G V L+R QLI+Q L ED IF++R+Q E K+ N+ ++++E + + +++
Sbjct: 381 GYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER-KLANEKRRKQEAKAREEDRAS 439
Query: 651 K 651
K
Sbjct: 440 K 440
>gi|67516851|ref|XP_658311.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|74598763|sp|Q5BFH3.3|XRN2_EMENI RecName: Full=5'-3' exoribonuclease 2
gi|40746327|gb|EAA65483.1| hypothetical protein AN0707.2 [Aspergillus nidulans FGSC A4]
gi|259489019|tpe|CBF88946.1| TPA: 5'-3' exoribonuclease 2 (EC 3.1.13.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5BFH3] [Aspergillus
nidulans FGSC A4]
Length = 1032
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 277/375 (73%), Gaps = 7/375 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP +I +E+ PQEVNG++IP D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISSVIEELPQEVNGEEIPVDITGPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMIEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
+++E EK E R+ K D + E+ +DSN ITPGTPFM L+A L Y
Sbjct: 121 SAQEAREQDEKKQEFQRMLAKQNGDKEQMLQEEVIQKTWDSNVITPGTPFMDILAASLRY 180
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QRA P+HDPN +H + G DADL
Sbjct: 181 WIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRASPEHDPNARHVIYGLDADL 240
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFGS 294
IMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH+ +EC G E N E G+
Sbjct: 241 IMLGLATHEPHFRVLREDVFFQESKQRTCHLCGQPGHKAEECRGQAKEKNGEFDEKGKGA 300
Query: 295 EVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
++ FI++ +S+LREYL EL +P+ PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+IR
Sbjct: 301 TLKPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDIR 360
Query: 354 EGAVDRLVNLYKKTV 368
E +D L+ +++ +
Sbjct: 361 EDGIDTLIAIWRDNI 375
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 65/96 (67%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
D + + +E D VRLWE+G+ DRYYE KF V D FR V Y GL WVL YY
Sbjct: 565 DKPEPAKADELPPDTVRLWEEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYY 624
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
+QGC SW WY+P+HYAPFA+DF++I +++ +FE GT
Sbjct: 625 FQGCPSWTWYYPYHYAPFAADFVDIGDMELSFEKGT 660
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A++ Y L+ +E
Sbjct: 692 DSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMSKKYPLLTEDE 743
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT G V L++ QLI+Q L ED IF++R+Q E K+ N+ ++++E + + ++
Sbjct: 380 GYLTQDGRVDLKKAQLILQGLAKQEDAIFRRRRQAEER-KLANEKRRKQEEKARNEERAR 438
Query: 651 K----APSF 655
K +PS+
Sbjct: 439 KRRRSSPSY 447
>gi|226289075|gb|EEH44587.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1049
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/376 (57%), Positives = 278/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE+N Q++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEINEQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E+EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ C E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVTMKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +KVI+SDA VPGEGEHKIM++IR QR+ P+HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKVIISDATVPGEGEHKIMEFIRSQRSCPEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SSLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 389 KRSFDDVDESSEEEESN------------DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
KR D +D +E E + D VRLWE+G+ DRYYE KF V DI FR
Sbjct: 540 KRKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQKFQVHPKDIEFRHK 599
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V YV GL WVL YY+QGC SW WY+P+HYAPFA+DF+ + +++ F G
Sbjct: 600 VARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVGLGKMNIEFNRGA 651
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 683 NSEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEE 734
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|194382024|dbj|BAG64381.1| unnamed protein product [Homo sapiens]
Length = 874
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 244/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 352 DQPAFTPSGILTPH 365
>gi|332858058|ref|XP_001145394.2| PREDICTED: 5'-3' exoribonuclease 2 isoform 4 [Pan troglodytes]
gi|397478695|ref|XP_003810675.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 874
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 244/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 352 DQPAFTPSGILTPH 365
>gi|402883355|ref|XP_003905185.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Papio anubis]
Length = 874
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 244/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 352 DQPAFTPSGILTPH 365
>gi|332238208|ref|XP_003268295.1| PREDICTED: 5'-3' exoribonuclease 2 isoform 3 [Nomascus leucogenys]
Length = 874
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/299 (72%), Positives = 244/299 (81%), Gaps = 5/299 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
MMVAIFE IDRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+R
Sbjct: 1 MMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEAAVEKQRVR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VIL
Sbjct: 61 EEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVIL 119
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA+ PGEGEHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEF
Sbjct: 120 SDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEF 179
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEK 312
KPN+ +PC +C Q GHE+K+C GL E + S E EFIF+RL+VLREYLE+
Sbjct: 180 KPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLER 239
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLVN+YK V+KT
Sbjct: 240 ELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVNIYKNVVHKT 298
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 415 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 471
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 472 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 515
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 546 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 598
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 300 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 351
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 352 DQPAFTPSGILTPH 365
>gi|119495190|ref|XP_001264385.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
gi|119412547|gb|EAW22488.1| 5'->3' exoribonculease Dhp1 [Neosartorya fischeri NRRL 181]
Length = 1057
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/377 (57%), Positives = 280/377 (74%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E+ P E+NG+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEELPYEINGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMMV IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLA--DGCILPPEKEK---GSHFDSNCITPGTPFMARLSACL 175
+++E E + R K+LA +G + E ++ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFR-KMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASL 179
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QRA P+HDPNT+H + G DA
Sbjct: 180 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDA 239
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N E
Sbjct: 240 DLIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQK 299
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
GS ++ FI++ +S+LREYL EL +P FP+ ERALDDWVFMCFFVGNDFLPHLPSL+
Sbjct: 300 GSSLKPFIWLHVSILREYLAAELYVPQQSFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L+ +++ +
Sbjct: 360 IRENGIDTLIAIWRDNI 376
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 63/91 (69%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ E+E D VRLWE+G+ DRYYE KF V D FR V Y GL WVL YY+QGC
Sbjct: 585 AKEDELPPDTVRLWEEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCP 644
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I +++ NF+ G
Sbjct: 645 SWTWYYPYHYAPFAADFVDIGDMEINFDKGV 675
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y L+ +E
Sbjct: 707 ESEIIDFYPEDFAVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDE 758
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+ G V L+R QLI+Q L ED IF++R+Q E K+ N +KRR+++ K +
Sbjct: 381 GYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEER-KLAN--EKRRKQEAKAREEER 437
Query: 651 KAPSFIPGGQFAPQDSPI 668
+ P DSP+
Sbjct: 438 ARKRRRSSPTYEPMDSPV 455
>gi|115492077|ref|XP_001210666.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
gi|114197526|gb|EAU39226.1| 5'-3' exoribonuclease 2 [Aspergillus terreus NIH2624]
Length = 1022
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 281/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E++P EVNG+++P D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISSVIEERPYEVNGEEVPVDTTRPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPVNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 A---SKETAEKIAEVARIREKLLADGCILPPEKEK-GSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E +++ K + ++E +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFRKLQAKQNGNKADQDLQEEVIQKTWDSNVITPGTPFMDILAASLR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H + G DAD
Sbjct: 181 YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRADPEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP F ++RE+ F+ ++AR C +CGQ+GH+ +EC G E + E G
Sbjct: 241 LIMLGLATHEPYFRVLREDVFFQESKARTCHLCGQVGHKAEECRGRAKEKSGEFDEKQNG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +S+LREYL EL +PN PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 TSLKPFIWLNVSILREYLAVELHVPNQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 65/91 (71%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ ++E D VRLWE+G+ DRYYE KF V +D FR V Y GL WVL YY+QGC
Sbjct: 570 NKDDEMPPDTVRLWEEGYADRYYEQKFGVDPEDKEFRHKVARAYAEGLAWVLLYYFQGCP 629
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++IA++ +FE GT
Sbjct: 630 SWTWYYPYHYAPFAADFVDIADMIPSFEKGT 660
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y LS EE
Sbjct: 692 DSEIIDFYPEDFAVDLNGKKFAWQGVVLLPFIDEKRLLNAMEKKYPLLSDEE 743
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKR--RERQMKMAAQ 648
G+LT G V ++ QLI+Q L ED IF++R+Q E K +K+ ++R+ + Q
Sbjct: 381 GYLTKDGHVDFKKAQLILQGLAKQEDAIFRRRRQVEERKAANEKRRKQEAQDREERSKRQ 440
Query: 649 STKAPSF 655
+PS+
Sbjct: 441 RRGSPSY 447
>gi|224123990|ref|XP_002319214.1| predicted protein [Populus trichocarpa]
gi|222857590|gb|EEE95137.1| predicted protein [Populus trichocarpa]
Length = 692
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 243/523 (46%), Positives = 327/523 (62%), Gaps = 61/523 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAF+RWL+ KYP + +E+ P +NG +P D+S PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLTEKYPLITADVMEETPLLINGVSVPLDTSCPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P +E+ A+F+ IDR+F I+RPRKLL+MAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEGLPPPTTYEEVFAAVFKYIDRIFSIIRPRKLLFMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGS-----HFDSNCITPGTPFMARLSACL 175
A+++ A++ + DG I+ PE E+G+ DSN ITPGT FM LS+ L
Sbjct: 121 AARDAADQALSIE-------TDGGIV-PESEEGNLEQVKKLDSNVITPGTEFMDLLSSAL 172
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
HYYI R+ D GW+GIKVILSDANV GEGEHKIM YIR QR P DPNT+HCL G DA
Sbjct: 173 HYYIRLRMKEDLGWRGIKVILSDANVAGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDA 232
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIML LA+HE +F+I+RE K N D G+ ++ + S
Sbjct: 233 DLIMLALASHEIHFSILRERRKLNGD--SDQVGKFAENIENHI---------------SG 275
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
++F F+ + +LREYL +L +P+ ER +DD+VFMC FVGNDFLPH+PSLEI EG
Sbjct: 276 MKFQFLNVWILREYLAYDLRIPDTTLKVDLERVIDDFVFMCLFVGNDFLPHIPSLEISEG 335
Query: 356 AVDRLVNLYKKTVYKTQEQLRQE------------ENGGGGGRGVKR-----SFDDVD-- 396
A+D L+ +YKK + L + G + R S +D++
Sbjct: 336 AIDLLMTVYKKEFAQMGGYLTNSFEINLIRVEHFVQALGSHESAIFRRRNQVSLNDLEIR 395
Query: 397 --ESSEEEES--------NDEVRLWEDGFKDRYYESKFDVPKDD--IAFRLMVGHEYVLG 444
S+ +++ +D ++L ++G+K+RYY KF+ +D R +YV G
Sbjct: 396 FQRISKRQQAFHSSKSLFDDGIKLGDEGWKERYYAEKFEAKSEDERDTIRRHAVFKYVEG 455
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+CWV++YYY+G SW+W++P+HYAPFASDF +++ +F G
Sbjct: 456 ICWVMRYYYEGVCSWQWFYPYHYAPFASDFYGCDQLEIHFTLG 498
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 624 QTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGK 683
Q E F + K + + A S A SPI+DFYP DF++D NGK
Sbjct: 490 QLEIHFTLGEPFKPFDQLMAVLPAASAHALPLFYRKLMIDASSPILDFYPTDFELDNNGK 549
Query: 684 KFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+F+WQ + LPF++E RL + L+ EE
Sbjct: 550 RFSWQAICKLPFIEESRLVSEITKVEHTLTDEE 582
>gi|342889646|gb|EGU88669.1| hypothetical protein FOXB_00813 [Fusarium oxysporum Fo5176]
Length = 3523
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/374 (56%), Positives = 278/374 (74%), Gaps = 9/374 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS +YP +I +ED+P + +G IP D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSSRYPKIISPVIEDQPLTMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G L E E+ FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAQEKEKDKQELIKLLKQQNGGNLTAESEETVLKKAFDSNSITPGTPFMDILALSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +K+I+SDA VPGEGEHKIM+++R QRA PDHDPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GH+ + C G + + + E
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEQKARLCKLCGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
G ++ FI++ ++VLREYLE EL++PNLPF + ERA+DDW+FMC FVGNDFLPHLP+LE
Sbjct: 301 GVALKPFIWLHVAVLREYLEVELSVPNLPFRFDVERAVDDWIFMCCFVGNDFLPHLPALE 360
Query: 352 IREGAVDRLVNLYK 365
IRE +D L ++K
Sbjct: 361 IREHGIDTLTKIWK 374
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
EE D+VRLWEDG+ DRYYE KF DI FR V YV GL WVL YY+QGC SW+
Sbjct: 554 EEGPVDDVRLWEDGYADRYYEKKFHKDPQDIEFRHEVARAYVEGLAWVLLYYFQGCPSWE 613
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P+HYAPFA+DF +I ++ +FE G
Sbjct: 614 WYYPYHYAPFAADFQDIDKMKISFEKG 640
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF+IDLNGKK AWQGVALLPF++ RL A+ Y +LS +S
Sbjct: 673 ESNIIDFYPEDFEIDLNGKKMAWQGVALLPFIEMPRLLAAVQAKYPELSAADS 725
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
G++T G + LER Q+I+ L ED IFK+R++ E R KRR+ Q
Sbjct: 382 GYVTKDGHIDLERAQVILSGLAKQEDGIFKRRKEQE---DRREANFKRRKLQ 430
>gi|145240295|ref|XP_001392794.1| 5'-3' exoribonuclease 2 [Aspergillus niger CBS 513.88]
gi|134077309|emb|CAK45649.1| unnamed protein product [Aspergillus niger]
Length = 1045
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/377 (55%), Positives = 278/377 (73%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E+ PQE+NG+++P D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-----FDSNCITPGTPFMARLSACL 175
+++E E + R K+L +++ H +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAREADEKKEEFR-KMLEKQNGKKEDEDMQEHVIQKTWDSNVITPGTPFMDILAAAL 179
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H + G DA
Sbjct: 180 RYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTRHVIYGLDA 239
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N +
Sbjct: 240 DLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKNGQFDEKGK 299
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
G+ ++ FI++ +S+LREYL EL +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+
Sbjct: 300 GTSLKPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L+ +++ +
Sbjct: 360 IRENGIDTLIAIWRDNI 376
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 65/92 (70%)
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
+S +E D VRLWE+G+ DRYYE KF V +D FR V Y GL WVL+YY+QGC
Sbjct: 581 DSQNDELPPDTVRLWEEGYADRYYEQKFGVDPEDKEFRHKVARAYAEGLAWVLRYYFQGC 640
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I +++ FE GT
Sbjct: 641 PSWTWYYPYHYAPFAADFVDIGDMELQFEKGT 672
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y LS +E
Sbjct: 704 DSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDE 755
>gi|361125661|gb|EHK97694.1| putative 5'-3' exoribonuclease 2 [Glarea lozoyensis 74030]
Length = 1008
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/379 (56%), Positives = 277/379 (73%), Gaps = 22/379 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP ++ ++P+E++G +IP D+ PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSQKYPKIVSG---EQPREIDGVQIPVDTRGPNPNGEEFDNLYLDMNGIVH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+P PKDE+EMM+ IF+ DR+ +VRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLLIAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E EK A+ A + + L + G K + FDSN ITPGTPFM L++ L Y+I
Sbjct: 118 SAQEAKEKEADKAELAKMLKSQGGRTEDAAVKKA-FDSNEITPGTPFMDILASSLRYWIA 176
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+LN DP W +KVI+SD+ VPGEGEHKIM++IR QR+ PDHDPNT+H + G DADLIML
Sbjct: 177 LKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFIRSQRSSPDHDPNTRHVIYGLDADLIML 236
Query: 241 GLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
GLATHEP+F ++RE+ ++P C +CGQ GHE +EC G ++ + G E
Sbjct: 237 GLATHEPHFRVLREDVFAQDSKPRTCHMCGQAGHEARECTG-------QAKVKDGDFDEK 289
Query: 298 --------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
FI++ +S+LREYLE EL +P+ PF + ERALDDWVFMCFFVGNDFLPHLPS
Sbjct: 290 DSAPALKPFIWLHVSILREYLEAELYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPS 349
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIRE +D L+ +++ +
Sbjct: 350 LEIRENGIDTLIAIWRDNI 368
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
+E D VRLW++G+ DRYY KFDV DI FR V YV GL WVL YY+QGC SW
Sbjct: 562 DEPPVDNVRLWDEGYADRYYSQKFDVHPSDIEFRHKVARAYVEGLAWVLLYYFQGCPSWD 621
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P+HYAPFA+DF+++ ++ +F G
Sbjct: 622 WYYPYHYAPFAADFVDLKDMTISFNKG 648
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 41/49 (83%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
DS IIDFYPEDF +DLNGKKFAWQGVALLPF+D ERL +A+A Y L+
Sbjct: 681 DSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLQAMAKVYPTLA 729
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G+LT G V LER QLI++ L ED IF++R++TE R KRR+ Q +
Sbjct: 373 GYLTKDGHVDLERAQLILEGLAKQEDAIFRRRKETE---DRREAGAKRRKLQAE 423
>gi|358372009|dbj|GAA88615.1| 5'->3' exoribonculease Dhp1 [Aspergillus kawachii IFO 4308]
Length = 1045
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/385 (54%), Positives = 277/385 (71%), Gaps = 26/385 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E+ PQE+NG+++P D+++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEFPQEINGEEVPVDTTRPNPNGDEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPSNEQEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-------------FDSNCITPGTPF 167
+++E E + R+ L E++ G +DSN ITPGTPF
Sbjct: 121 SAQEAREADEKKEEFRKML---------ERQNGKKEDEDMQEQVIQKTWDSNVITPGTPF 171
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
M L+A L Y+I +LN DP W+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+
Sbjct: 172 MDILAAALRYWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFVRSQRASPEHDPNTR 231
Query: 228 HCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
H + G DADLIMLGLATHEP F ++RE+ F+ ++AR C +CGQ GH+ +EC G E N
Sbjct: 232 HVIYGLDADLIMLGLATHEPYFRVLREDVFFQESRARTCRLCGQAGHKAEECKGQAKEKN 291
Query: 286 PE-SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDF 343
+ G+ ++ FI++ +S+LREYL EL +P PFP+ ERALDDWVFMCFFVGNDF
Sbjct: 292 GQFDEKGKGTSLKPFIWLNVSILREYLAAELYVPQQPFPFDLERALDDWVFMCFFVGNDF 351
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTV 368
LPHLPSL+IRE +D L+ +++ +
Sbjct: 352 LPHLPSLDIRENGIDTLIAIWRDNI 376
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 65/92 (70%)
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
+S +E D VRLWE+G+ DRYYE KF V +D FR V Y GL WVL+YY+QGC
Sbjct: 581 DSQNDELPPDTVRLWEEGYADRYYEQKFGVDPEDKEFRHKVARAYAEGLAWVLRYYFQGC 640
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+P+HYAPFA+DF++I E++ FE GT
Sbjct: 641 PSWTWYYPYHYAPFAADFVDIGEMELQFEKGT 672
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE+RL A+ Y LS +E
Sbjct: 704 DSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEKRLLAAMEKKYPLLSDDE 755
>gi|255538898|ref|XP_002510514.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223551215|gb|EEF52701.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1113
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/374 (60%), Positives = 277/374 (74%), Gaps = 12/374 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P ++G KIP D+S+PNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDAIEEEPVVIDGVKIPVDASRPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ E AE R+R++ +G LPP KE FDSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDREEAAAEEERLRQEFEREGRKLPP-KESSQVFDSNIITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGWK +KVILSDANVPGEGEHK+M YIR QR P +DPNT+HCL G DADLIML
Sbjct: 180 LRLNNDPGWKKVKVILSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDA-------EPNPESVITF 292
LATHE +F+I+RE F P Q C +CGQMGH +C G E E +
Sbjct: 240 ALATHEIHFSILREIVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGDEGAV-- 297
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
++ + F+ + LREYLE E+ +PN PF FE +DD++FMCFFVGNDFLPH+P+LEI
Sbjct: 298 -AKKPYQFLNIWTLREYLELEMRIPNPPFKIDFECIVDDFIFMCFFVGNDFLPHMPTLEI 356
Query: 353 REGAVDRLVNLYKK 366
REGA++ L+ +YKK
Sbjct: 357 REGAINLLLAVYKK 370
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 4/103 (3%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGL 445
+ R D S EE D++RL + G+K+RYYE KF P++ R V Y GL
Sbjct: 532 ILREKSDAFNSKNPEE--DKIRLGDPGWKERYYEEKFSGKTPEELEDIRRDVVLRYTEGL 589
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YYY+G SW+W++P+HYAPFASD ++ ++D FE G+
Sbjct: 590 CWVMHYYYEGVCSWQWFYPYHYAPFASDLKHLGQLDIKFELGS 632
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK++AWQG+A LPF+DE RL + L+ EE+
Sbjct: 664 NSPIIDFYPTDFEVDMNGKRYAWQGIAKLPFIDEVRLLAEVKKIEHTLTEEEA 716
>gi|242774442|ref|XP_002478441.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
gi|218722060|gb|EED21478.1| 5'->3' exoribonculease Dhp1 [Talaromyces stipitatus ATCC 10500]
Length = 1042
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/379 (57%), Positives = 275/379 (72%), Gaps = 11/379 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E++P EVNG+ IP D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAE---KIAEVARIREKLLADGCILP----PEKEKGSHFDSNCITPGTPFMARLSA 173
+++E E K E ++ + A I P E+ +DSN ITPGTPFM LSA
Sbjct: 121 SAQEARENDQKKEEFQKLLARQNAAKGIDPDNNLEEQVIKKTWDSNVITPGTPFMDILSA 180
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+I +LN DP W+ +K+I+SDA VPGEGEHK+M++IR QR P HDPNT+H L G
Sbjct: 181 SLRYWISYKLNTDPAWEKLKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGL 240
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH+ +EC G E N E
Sbjct: 241 DADLIMLGLATHEPHFRVLREDVFFQESKPRTCRLCGQTGHKAEECRGQAKEKNGEFDEK 300
Query: 292 FGSEV--EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
+ V FI++ +SVLREYL EL +P FP+ ERALDDWVFMCFFVGNDFLPHLPS
Sbjct: 301 QKAAVLKPFIWLNVSVLREYLAIELQVPQQRFPFDLERALDDWVFMCFFVGNDFLPHLPS 360
Query: 350 LEIREGAVDRLVNLYKKTV 368
L+I+E A+D L++++++ +
Sbjct: 361 LDIKENAIDLLISIWRENI 379
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 56/82 (68%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D VRLWE G+ +RYYE KF V ++ FR V Y GL WVL YY QGC SW WY+P+
Sbjct: 597 DTVRLWEPGYTERYYEQKFHVDPSNVEFRHQVARSYAEGLQWVLLYYMQGCPSWTWYYPY 656
Query: 466 HYAPFASDFINIAEVDTNFETG 487
HYAPFASDF++I ++ NF G
Sbjct: 657 HYAPFASDFVDIGDMKPNFVKG 678
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE RL A+ Y LS +E
Sbjct: 711 NSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDEVRLLAAMEKKYPLLSADE 762
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
++T G V + QLI+ LG E+ IF++R+Q E K N+ +++ E + + A +S K
Sbjct: 385 YVTKDGIVNFKHAQLILTGLGKQEEAIFRRRRQAEER-KAANEQRRKEEEKARNAERSQK 443
Query: 652 ----APSFIPG 658
+P + G
Sbjct: 444 RRRSSPDYTAG 454
>gi|347837816|emb|CCD52388.1| similar to 5'-3' exoribonuclease 2 [Botryotinia fuckeliana]
Length = 966
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/374 (56%), Positives = 278/374 (74%), Gaps = 9/374 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWL+++YP ++ +E++P+E++GQ IP D PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+P PKDE+EMM+ IF+ DR+ +VRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E EK + A + + L + G + E E +DSN ITPGTPFM L+ L Y+I
Sbjct: 121 SAQEAKEKAEDKAELLKMLKSQGSHI-EETEVKKAWDSNEITPGTPFMDILALSLRYWIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+LN DP W +KVI+SD+ VPGEGEHKIM+++R QR+ PDH+PNT+H + G DADLIML
Sbjct: 180 YKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIML 239
Query: 241 GLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGL----DAEPNPESVITFGS 294
GLATHEP+F I+RE+ F + R C +CGQ GHE +EC G+ D E + ++ + +
Sbjct: 240 GLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKA--SAPT 297
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FI++ +SVLREYL E+ +P+ PF + ERALDDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 298 LKPFIWLHVSVLREYLAAEMYVPSQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLEIRE 357
Query: 355 GAVDRLVNLYKKTV 368
++ L+ +++ +
Sbjct: 358 DGINTLIAIWRDNI 371
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D VRLWEDG+ DRYYE KF+ DI FR VG YV GL WVL YY+QGC SW WY+P+
Sbjct: 562 DTVRLWEDGYADRYYEQKFNRDPKDIEFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPY 621
Query: 466 HYAPFASDFINIAEVDTNFETG 487
HYAPFA+DF N+ ++ +F+ G
Sbjct: 622 HYAPFAADFANLKDMKIDFQKG 643
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 40/49 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
+DS IIDFYPEDF +DLNGKKFAWQGVALLPF+D ERL A+A Y L
Sbjct: 675 EDSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTL 723
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT G V LER Q I+ L ED IF+KR++ E F+ + K+ R + +
Sbjct: 376 GYLTKDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQKKRKLNNERNARGR------ 429
Query: 651 KAPSFIPGGQFAPQDSP 667
G PQDSP
Sbjct: 430 -------GNNGGPQDSP 439
>gi|302142638|emb|CBI19841.3| unnamed protein product [Vitis vinifera]
Length = 870
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/377 (61%), Positives = 279/377 (74%), Gaps = 14/377 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P E++G IP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FM LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPP-KQQSQVCDSNVITPGTEFMGVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG--------LDAEPNPESVIT 291
LATHE +F+I+RE F P Q C +CGQMGH +C G D + SV+
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVV- 298
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ + F+ + LREYLE E+ +PNLPF FE +DD++FMCFFVGNDFLPH+P+LE
Sbjct: 299 ---KKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLE 355
Query: 352 IREGAVDRLVNLYKKTV 368
IREGA++ L+ +YKK +
Sbjct: 356 IREGAINLLMAVYKKEL 372
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCW 447
R D+ S EE D+V+L E G+K+RYYE KF P++ A R V +Y GLCW
Sbjct: 521 REKSDLFNSKNPEE--DKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCW 578
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD ++ +++ +FE G+
Sbjct: 579 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGS 619
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGK+FAWQG+A LPF+DE RL + L+ EE
Sbjct: 651 NSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEE 702
>gi|212531981|ref|XP_002146147.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
gi|210071511|gb|EEA25600.1| 5'->3' exoribonculease Dhp1 [Talaromyces marneffei ATCC 18224]
Length = 1042
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/379 (57%), Positives = 273/379 (72%), Gaps = 11/379 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I +E++P EVNG+ IP D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIISPVIEEQPYEVNGEVIPVDTTKPNPNGEETDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEQEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAE---KIAEVARIREKLLADGCILP----PEKEKGSHFDSNCITPGTPFMARLSA 173
+++E E K E ++ K A I P E+ +DSN ITPGTPFM LSA
Sbjct: 121 SAQEARENDQKKEEFQKLLVKQNAAKGIDPDKDIKEQVIQKTWDSNVITPGTPFMDILSA 180
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+I +LN DP W+ +K+I+SDA VPGEGEHK+M++IR QR P HDPNT+H L G
Sbjct: 181 SLRYWISYKLNTDPAWEKMKIIISDATVPGEGEHKVMNFIRSQRQDPSHDPNTRHVLYGL 240
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE--SV 289
DADLIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH+ +EC G E N E
Sbjct: 241 DADLIMLGLATHEPHFRVLREDVFFQESRPRTCRLCGQPGHKAEECRGEAKEKNGEFDEK 300
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
FI++ +SVLREYL EL +P FP+ ERALDDWVFMCFFVGNDFLPHLPS
Sbjct: 301 QKAAPLKPFIWLNVSVLREYLAVELQVPQQRFPFDLERALDDWVFMCFFVGNDFLPHLPS 360
Query: 350 LEIREGAVDRLVNLYKKTV 368
L+I+E A+D L++++++ +
Sbjct: 361 LDIKENAIDLLISIWRENI 379
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D VRLWE G+ +RYYE KF V ++ FR V Y GL WVL YY QGC SW WY+P+
Sbjct: 593 DTVRLWESGYTERYYEQKFHVDPSNVEFRYQVARSYAEGLQWVLLYYMQGCPSWTWYYPY 652
Query: 466 HYAPFASDFINIAEVDTNFETG 487
HYAPFA+DF++I + +FE G
Sbjct: 653 HYAPFAADFVDIGSMKPSFEKG 674
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF +DLNGKKFAWQGV LLPF+DE RL A+ Y LS +E
Sbjct: 707 NSEIIDFYPEDFPVDLNGKKFAWQGVVLLPFIDETRLLAAMEKKYPLLSADE 758
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
++T G V QLI+ LG ED IF++R+Q E K N+ +++ E + + A +S K
Sbjct: 385 YVTKDGIVNFNHAQLILNGLGKQEDGIFRRRRQAEER-KAANEQRRKEEEKARNAERSQK 443
Query: 652 ----APSFIPG 658
+P + G
Sbjct: 444 RRRSSPDYTAG 454
>gi|359492219|ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/377 (61%), Positives = 279/377 (74%), Gaps = 14/377 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P E++G IP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVEIDGISIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFDEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FM LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEKEGRKLPP-KQQSQVCDSNVITPGTEFMGVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRLNNDPGWKSIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG--------LDAEPNPESVIT 291
LATHE +F+I+RE F P Q C +CGQMGH +C G D + SV+
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFMCGQMGHLAADCEGKAKRKAGEFDEKGQSASVV- 298
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ + F+ + LREYLE E+ +PNLPF FE +DD++FMCFFVGNDFLPH+P+LE
Sbjct: 299 ---KKPYQFLNIWTLREYLEYEMRIPNLPFEIDFEHIVDDFIFMCFFVGNDFLPHMPTLE 355
Query: 352 IREGAVDRLVNLYKKTV 368
IREGA++ L+ +YKK +
Sbjct: 356 IREGAINLLMAVYKKEL 372
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCW 447
R D+ S EE D+V+L E G+K+RYYE KF P++ A R V +Y GLCW
Sbjct: 521 REKSDLFNSKNPEE--DKVKLGEAGWKERYYEEKFSTKTPEEQEAMRNDVVLKYTEGLCW 578
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD ++ +++ +FE G+
Sbjct: 579 VMHYYYEGVCSWQWFYPYHYAPFASDLKDLGQLNISFELGS 619
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGK+FAWQG+A LPF+DE RL + L+ EE
Sbjct: 651 NSPIIDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEE 702
>gi|449528758|ref|XP_004171370.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 373
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/372 (60%), Positives = 271/372 (72%), Gaps = 13/372 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P ++G IP D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIDGIAIPVDTSKPNPNKLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFSEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ + AE R+RE+ +G LPP KE+ FDSN ITPGT FMA LS L YY+H
Sbjct: 121 AAKDAIDAAAEETRLREEFEKEGRKLPP-KEESQVFDSNVITPGTDFMAVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 IRLNNDPGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-- 297
LATHE +F+I+RE F P Q C +CGQMGH +C G + E F +VE
Sbjct: 240 ALATHEVHFSILREIVFTPGQQEKCFLCGQMGHFAADCEGKAKRKSGE----FDEKVEEV 295
Query: 298 -----FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ F+ + LREYLE E+ +PN PF ER +DD+VFMCFFVGNDFLPH+P+LEI
Sbjct: 296 TIKKPYQFLHIWTLREYLEYEMRIPNPPFAIDIERIVDDFVFMCFFVGNDFLPHMPTLEI 355
Query: 353 REGAVDRLVNLY 364
RE + ++ +Y
Sbjct: 356 REVNLMLVLTIY 367
>gi|384490873|gb|EIE82069.1| hypothetical protein RO3G_06774 [Rhizopus delemar RA 99-880]
Length = 967
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/374 (58%), Positives = 270/374 (72%), Gaps = 11/374 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLS K+P V+ +E++P+ VNG IP D++KPNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSDKFPKVVTPAIEERPKTVNGMTIPVDTTKPNPNNEEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE KPAP EDEMM+ IF +DR+ IVRPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCCHPEGKPAPATEDEMMIEIFTYLDRIVDIVRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++ + R+ +L A G EK K SHFDSNCITPGTPFMA L+ CL Y+I
Sbjct: 121 AAQLAQIERDASERVAYELAAIGQEHQMEK-KESHFDSNCITPGTPFMAHLATCLRYHIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+ N DP WK +KVILSDA VPGEGEHK+M++IR +R++ +HDPNT H + G DADLIML
Sbjct: 180 SKQNTDPLWKKLKVILSDATVPGEGEHKVMEFIRVERSRSEHDPNTSHVMYGLDADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKEC-VGLD--AEPNPESVITFGSE 295
L THEP+F IIRE+ + R C C + GH +C + D AEP+ +
Sbjct: 240 ALGTHEPHFKIIREDVFADNKRKSNCTNCNRRGHTADKCPLSEDSAAEPSKDDNSNLKP- 298
Query: 296 VEFIFVRLSVLREYLEKELAMPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
++F+ +++LREYLE L N+P P++ ERA+DDWVFMCFFVGNDFLPHLPSLEIRE
Sbjct: 299 --YVFLHVNILREYLEYALKF-NIPGIPWNLERAIDDWVFMCFFVGNDFLPHLPSLEIRE 355
Query: 355 GAVDRLVNLYKKTV 368
GA+ L L+KK +
Sbjct: 356 GAISTLSLLWKKCM 369
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDV---PKDDIAFRLMVGHEYVLGLCWVLKYY 452
D+++ E E +DEVRLWE G+K+RYY +KF + KD+I R +V Y GL WV KYY
Sbjct: 547 DDAAREREPDDEVRLWESGWKERYYGTKFRLNLEEKDEI--REIV-KSYCEGLIWVFKYY 603
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
Y GC SW WY+P++YAP ASDFINI D FE
Sbjct: 604 YLGCVSWSWYYPYYYAPMASDFINIDSFDIKFE 636
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPIID+YP F++D++GKK+ WQGV LPF++ ERL A+ Y++L+ EE
Sbjct: 670 ENSPIIDYYPTHFEVDMDGKKWEWQGVVKLPFINSERLLAAMDTVYDQLNEEE 722
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ + V +L L I +ST++L K M G++T GDV L+
Sbjct: 331 DDWVFMCFFVGNDFLPHLPSLEIREGAISTLSLLWKKC-----MPMMGGYMTKDGDVDLK 385
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKA 652
RVQ+++ +LG MED IF+ R+ E + R + KRR+ + + A K+
Sbjct: 386 RVQVLVSELGHMEDTIFRDRKAGE---ERRAQGAKRRKLENERRANEAKS 432
>gi|85078982|ref|XP_956265.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
gi|74630414|sp|Q8WZX5.3|XRN2_NEUCR RecName: Full=5'-3' exoribonuclease 2
gi|18307456|emb|CAD21516.1| related to dna exoribonuclease Dhp1p [Neurospora crassa]
gi|28917321|gb|EAA27029.1| hypothetical protein NCU01643 [Neurospora crassa OR74A]
Length = 1072
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/380 (56%), Positives = 270/380 (71%), Gaps = 15/380 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G IP D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMMV +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGC----ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RA++E EK + + E L P E FDSN ITPGTPFM L+A L
Sbjct: 121 RAAREAMEKEEDKQKFVELLKKQNGKPQEEEPVEVVVKKAFDSNSITPGTPFMDILAASL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W IKVI+SDA VPGEGEHKIM+++R QR P+HDPNT+H + G DA
Sbjct: 181 RYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE-----S 288
DLIMLGLATHEP+F ++RE+ +RP C +CGQ GH+ C G E N E +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEKDA 300
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
V+ FI++ +S+LREYL EL +P LPF ++ ERA+DDWVFMCFFVGNDFLPHLP
Sbjct: 301 VVPLKP---FIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHLP 357
Query: 349 SLEIREGAVDRLVNLYKKTV 368
+LEIRE +D L ++K +
Sbjct: 358 ALEIRENGIDTLTAIWKDNL 377
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 387 GVKRSFDDVDESSEEE-ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
G + S +V E SE + E D VRLWE+G+ DRYYE KF V + DI FR VG Y GL
Sbjct: 558 GPEASSTEVTEISESDAEPTDSVRLWEEGYADRYYEQKFKVDRKDIDFRHKVGRAYAEGL 617
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WVL+YY+QGC SW+W++P+HYAPFA+DF+++ +++ FE G
Sbjct: 618 AWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLGKMEIKFEKG 659
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ S I FYP+DF+IDLNGKK AWQGVALLPF+D RL A+ LS E+
Sbjct: 691 ETSEIRHFYPDDFEIDLNGKKMAWQGVALLPFIDMPRLLAAMETKSHLLSPED 743
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 10/74 (13%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQT----ETMFKMR---NKMKKRR---E 640
G+LT G LERVQ IM L ED IF++R++T E FK R ++ ++RR
Sbjct: 382 GYLTKDGHADLERVQYIMAGLAKQEDAIFRRRKETEDRREAGFKRRKLADEARQRRAQGS 441
Query: 641 RQMKMAAQSTKAPS 654
RQ++ AA+++ P+
Sbjct: 442 RQIRQAAENSGPPA 455
>gi|440639205|gb|ELR09124.1| hypothetical protein GMDG_03704 [Geomyces destructans 20631-21]
Length = 1005
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 273/376 (72%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PA F+WLS KYP ++ +ED ++V+ IP D+++PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGIPAAFKWLSTKYPKILSPVIEDHRKDVDNVAIPVDATQPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+P P +E+EMM+ IF+ +R+F +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPANEEEMMLEIFKYTERVFNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKL--LADGCILPPEKEK--GSHFDSNCITPGTPFMARLSACLH 176
+++E EK + A + + L A G + E +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEKDEDKAELLKMLRSQAGGQVEESTSEAMVTKTWDSNAITPGTPFMDILAASLR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+ +LN DP W +KVILSDA VPGEGEHKIM +IR QR+ PDHDPNT+H + G DAD
Sbjct: 181 YWTAYKLNTDPAWAKVKVILSDATVPGEGEHKIMQFIRSQRSSPDHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE--SVITF 292
LIMLGLATHEP+F ++RE+ F+ ++ R C +C Q GHE +EC G E + E +
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQDSKGRTCRLCNQKGHEARECRGQAKEKDGEFDEKDSV 300
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
FI++ +SVLREYLE EL +PN PF + ERA+DDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 QPLKPFIWLHVSVLREYLEAELYVPNQPFRFDLERAIDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLMAIWRDNI 376
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 62/87 (71%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
+E + D VRLWEDG+ DRYYE KF V D FR V YV GL WVL YY+QGC SW+
Sbjct: 574 DEAAVDNVRLWEDGYADRYYEQKFKVDPRDTEFRHKVAKAYVEGLAWVLLYYFQGCPSWE 633
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P+HYAPFA+DF+ +A++ FE G
Sbjct: 634 WYYPYHYAPFAADFVGLADMKIGFEKG 660
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 39/52 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVE 715
+DS II+FYP DF IDLNGKKFAWQGVALLPF+D +RL A+ Y L E
Sbjct: 692 EDSEIIEFYPPDFPIDLNGKKFAWQGVALLPFIDAKRLLAAMEQRYPLLPPE 743
>gi|239607237|gb|EEQ84224.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ER-3]
gi|327351196|gb|EGE80053.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1031
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/376 (56%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P+ E++MM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ G E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C GL E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 69/110 (62%), Gaps = 10/110 (9%)
Query: 389 KRSFDDVDESSEEE-----ESNDE-----VRLWEDGFKDRYYESKFDVPKDDIAFRLMVG 438
KR D ++ +E E + NDE VRLWEDG+ DRYYE KF V D FR V
Sbjct: 534 KRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYYEQKFRVDPKDTEFRHKVA 593
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
YV GL WVL YY+QGC SW WY+P+HYAPFA+DF+++ +++ F G
Sbjct: 594 RAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGKMNIEFSRGA 643
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 675 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEE 726
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L+R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|261200841|ref|XP_002626821.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
gi|239593893|gb|EEQ76474.1| 5'-3' exoribonuclease 2 [Ajellomyces dermatitidis SLH14081]
Length = 1031
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/376 (56%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P+ E++MM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ G E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGNKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCTEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C GL E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQPGHIAEACKGLAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 16/127 (12%)
Query: 378 EENGGGGGRGV------KRSFDDVDESSEEE-----ESNDE-----VRLWEDGFKDRYYE 421
E++ GG + KR D ++ +E E + NDE VRLWEDG+ DRYYE
Sbjct: 517 EDSADGGAKNTSPLSLGKRKADALETETESETPKKPQDNDELPPDTVRLWEDGYADRYYE 576
Query: 422 SKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVD 481
KF V D FR V YV GL WVL YY+QGC SW WY+P+HYAPFA+DF+++ +++
Sbjct: 577 QKFRVDPKDTEFRHKVARSYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGKMN 636
Query: 482 TNFETGT 488
F G
Sbjct: 637 IEFSRGA 643
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 675 ESEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSSEE 726
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L+R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|425770113|gb|EKV08587.1| 5'-3' exoribonuclease 2 [Penicillium digitatum Pd1]
gi|425771660|gb|EKV10097.1| 5'-3' exoribonuclease 2 [Penicillium digitatum PHI26]
Length = 1036
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 224/453 (49%), Positives = 306/453 (67%), Gaps = 22/453 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ +E++ Q V+G++IP D ++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSTKYPKIVSPVIEEQAQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P DE EMM+ I++ DR+ +VRPRKLL +AIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLAD------GCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
A++E E + + +K+LA G L E+ +DSN ITPGTPFM L+A
Sbjct: 121 AAQEAKENDQKKEEL-QKMLAQQHVAKTGEQLVREEVVQKTWDSNVITPGTPFMDILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+I +LN DPGW+ +K+I+SDA VPGEGEHKIM+++R QRA P+HDPNT+H + G D
Sbjct: 180 LRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNFVRSQRASPNHDPNTRHVIYGLD 239
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE--SVI 290
ADLIMLGL THEP F ++RE+ +RP C +CGQ GH+ +EC+G E + E
Sbjct: 240 ADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQTGHKAEECLGRPKEKSGEFDEKQ 299
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
FI++ ++VLREYL EL +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL
Sbjct: 300 HAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 359
Query: 351 EIREGAVDRLVNLYKKTV-----YKTQEQLRQEENGGGGGRGVKRSFDDV----DESSEE 401
+IRE +D L+ +++ + Y T++ + +N +G+ + D + ++ E
Sbjct: 360 DIRENGIDTLIAIWRDNLPAMGSYLTKDGSVELKNAQIILQGLAKQEDAIFARRRQADER 419
Query: 402 EESNDEVRLWEDGF--KDRYYESKFDVPKDDIA 432
+++N++ R +D K+R + + P+ D+
Sbjct: 420 KQANEKRRKEQDAARNKERAQKRRRSSPQRDLT 452
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
++ ++E D V+LWE G+ DRYYE KF V D+ FR V EY +GLCWVL+YY+Q
Sbjct: 577 AEKPKQDEAPEDTVKLWEPGYADRYYEQKFGVDPKDLEFRHQVAREYAIGLCWVLRYYFQ 636
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
GC SW WY+P HYAPFA+DF++IA++D FE GT
Sbjct: 637 GCPSWTWYYPRHYAPFAADFVDIADMDVQFEKGT 670
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE RL A+A Y L+ +E
Sbjct: 702 DSEIIDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDE 753
Score = 38.9 bits (89), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
+LT G V+L+ Q+I+Q L ED IF +R+Q + R + ++R ++ A +
Sbjct: 383 YLTKDGSVELKNAQIILQGLAKQEDAIFARRRQADE----RKQANEKRRKEQDAARNKER 438
Query: 652 A 652
A
Sbjct: 439 A 439
>gi|225560323|gb|EEH08605.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus G186AR]
Length = 1042
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHP+ KP P+ E++MM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
DD DE D VRLWEDG+ DRYYE KF V DI FR V YV GL WVL YY
Sbjct: 561 DDTDELPP-----DTVRLWEDGYADRYYEQKFHVDPKDIEFRHKVARAYVEGLAWVLLYY 615
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
+QGC SW WY+P+HYAPFA+DF+++ + F G
Sbjct: 616 FQGCPSWTWYYPYHYAPFAADFVDLGNMKIEFNKGA 651
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 683 ESEIIDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEE 734
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L+R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|240278750|gb|EER42256.1| 5'->3' exoribonculease Dhp1 [Ajellomyces capsulatus H143]
gi|325090340|gb|EGC43650.1| 5'-3' exoribonculease Dhp1 [Ajellomyces capsulatus H88]
Length = 1042
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHP+ KP P+ E++MM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDILAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
DD DE D VRLWEDG+ DRYYE KF V DI FR V YV GL WVL YY
Sbjct: 561 DDTDELPP-----DTVRLWEDGYADRYYEQKFHVDPKDIEFRHKVARAYVEGLAWVLLYY 615
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
+QGC SW WY+P+HYAPFA+DF+++ + F G
Sbjct: 616 FQGCPSWTWYYPYHYAPFAADFVDLGNMKIEFNKGA 651
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPEDF IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 683 ESEIIDFYPEDFPIDLNGKKFAWQGVALLPFIDEKRLLLAMEKRYPLLSNEE 734
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L+R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLDRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|315040952|ref|XP_003169853.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
gi|311345815|gb|EFR05018.1| 5'-3' exoribonuclease 2 [Arthroderma gypseum CBS 118893]
Length = 1038
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/376 (55%), Positives = 277/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFAKLLKKQKRGKSDVTIAEEVIKKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +L+ DPGW+ +K+I+SDA VPGEGEHKIM+++R QRA P++DPNT+H + G DAD
Sbjct: 181 YWVAYKLSTDPGWEKLKIIISDATVPGEGEHKIMEFVRSQRACPEYDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKQGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +S+LREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 SPLKPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 567 EDEMPPDTVRLWEDGYADRYYEQKFGVSPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 626
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I E+D F GT
Sbjct: 627 TWYYPYHYAPFAADFVDIGEMDVQFNKGT 655
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS E
Sbjct: 686 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEAE 738
>gi|400592939|gb|EJP60965.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 968
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/380 (55%), Positives = 275/380 (72%), Gaps = 15/380 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VED+P ++ G +IP D ++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDRPIVMDDGTEIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDKPAPKDE+EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDKPAPKDEEEMMLEIFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G L E + FD+N ITPGTPFM L++ L
Sbjct: 121 RSAQEAKEKENDKQELIKLLKQQNGGSLTAESTESVTKKAFDNNSITPGTPFMDILASSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +KVI+SDA VPGEGEHKIM+++R QRA PD+DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-----S 288
DLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ + C G EP E +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARACKLCGQKGHDAQNCKGETKEPTEEFDAKNN 300
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+T FI++ +SVLREYL ELA+P LPF + ER +DDW+FMC FVGNDFLPHLP
Sbjct: 301 ALTLKP---FIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLPHLP 357
Query: 349 SLEIREGAVDRLVNLYKKTV 368
+LEIRE +D L ++K+ +
Sbjct: 358 ALEIREHGIDTLTTIWKRNL 377
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 64/87 (73%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
E D VRLWEDG+ DRYY+ KF DI+FR V H YV GL WVL+YY+QGC SW+W
Sbjct: 557 ETPADPVRLWEDGYADRYYQLKFHRDPGDISFRTHVAHAYVEGLAWVLQYYFQGCPSWEW 616
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
Y+P+HYAPFA+DF +I++ + FE GT
Sbjct: 617 YYPYHYAPFAADFKDISQANVTFEKGT 643
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
QDS IIDFYPE+F++DLNGKK AWQGVALLPF++ +RL A+ Y LS E+
Sbjct: 674 QDSLIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLLAAVQKRYPLLSDED 726
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 8/107 (7%)
Query: 541 VSDNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVK 600
V D+ + V +L L I + T+T K + + G++T G +
Sbjct: 337 VIDDWIFMCCFVGNDFLPHLPALEIREHGIDTLTTIWKRN-----LPALGGYITKDGHID 391
Query: 601 LERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
LER Q I+ L ED IFKKR++ E R KRR Q A
Sbjct: 392 LERAQCILDGLAGQEDMIFKKRREQE---DRREASAKRRRLQNNGAT 435
>gi|402074937|gb|EJT70408.1| 5'-3' exoribonuclease 2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1040
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 275/378 (72%), Gaps = 11/378 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +EDKP E++ G IP D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPIEMDDGTVIPVDTAKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAPKDE+EMM+ IF DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLL--ADGCILPPEKEKG---SHFDSNCITPGTPFMARLSAC 174
R+++E EK + + KLL +G + PE + FD+N ITPGTPFM L+A
Sbjct: 121 RSAQEAKEKAEDKMELL-KLLKQQNGGDVAPETLESVTKKAFDTNSITPGTPFMLILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +LN DP W +K+I+SDA VPGEGEHKIMD++R QR+ PDHDPNT+H + G D
Sbjct: 180 LRYWCAYKLNTDPAWANLKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLD 239
Query: 235 ADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
ADLIMLGLATHEP+F ++RE+ + +AR C +CGQ GH+ + C G + E
Sbjct: 240 ADLIMLGLATHEPHFRVLREDVFAQQGKARMCKLCGQKGHDAQNCRGEAKKKEGEFDEKE 299
Query: 293 GSE--VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+E FI++ +SVLREYL EL + NLPF + ERA+DDW+F+C FVGNDFLPHLP+L
Sbjct: 300 KAEPLKPFIWLHVSVLREYLAVELEVSNLPFRFDLERAVDDWIFLCCFVGNDFLPHLPAL 359
Query: 351 EIREGAVDRLVNLYKKTV 368
EIRE ++ L N++K+ +
Sbjct: 360 EIRENGINTLTNIWKRNL 377
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 61/90 (67%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S E D VR+WE G+ DRYYE KF D+ FR V H YV GL WVL YY+QGC
Sbjct: 557 SGAAEGPVDTVRMWESGYSDRYYEQKFHADPKDVGFRHKVAHAYVEGLAWVLLYYFQGCP 616
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+WY+P+HYAPFA+DF +A++ +FE G
Sbjct: 617 SWEWYYPYHYAPFAADFQGLADLKISFEKG 646
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF++DLNGKKFAWQGV LLPF++ +RL A+ Y L+ EE+
Sbjct: 678 EDSEIIDFYPEDFELDLNGKKFAWQGVVLLPFIEMDRLLAAVEAKYPLLTPEEA 731
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRML-TYPGFLTDSGDVKL 601
D+ L V +L L I ++T+T ++ R L T G++T G + L
Sbjct: 339 DDWIFLCCFVGNDFLPHLPALEIRENGINTLT------NIWKRNLATMGGYVTKDGHIDL 392
Query: 602 ERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQF 661
ER+Q+IM L ED IF+KR+++E + K +K ++ + K + + SF GG
Sbjct: 393 ERIQVIMNGLAQQEDSIFRKRKESEDRKEANAKRRKLQDDREKYGRKGGQNESF--GGIA 450
Query: 662 AP 663
P
Sbjct: 451 EP 452
>gi|302663765|ref|XP_003023520.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
gi|291187523|gb|EFE42902.1| hypothetical protein TRV_02267 [Trichophyton verrucosum HKI 0517]
Length = 1037
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 277/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +L+ DPGW+ +KVI+SDA VPGEGEHKIM++IR QRA P++DPNT+H + G DAD
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 NPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 568 EDEMPPDTVRLWEDGYADRYYEQKFGVSPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 627
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I E+D F GT
Sbjct: 628 TWYYPYHYAPFAADFVDIGEMDVQFTKGT 656
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 687 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEE 739
>gi|302509948|ref|XP_003016934.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
gi|291180504|gb|EFE36289.1| hypothetical protein ARB_05228 [Arthroderma benhamiae CBS 112371]
Length = 1038
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 277/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFAKLLKKQKRGKKDVTITEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +L+ DPGW+ +KVI+SDA VPGEGEHKIM++IR QRA P++DPNT+H + G DAD
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 NPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 568 EDEMPPDTVRLWEDGYADRYYEQKFGVSPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 627
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I E+D F GT
Sbjct: 628 TWYYPYHYAPFAADFVDIGEMDVQFTKGT 656
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 687 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMGKRYHLLSEEE 739
>gi|154276492|ref|XP_001539091.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
gi|150414164|gb|EDN09529.1| hypothetical protein HCAG_06696 [Ajellomyces capsulatus NAm1]
Length = 475
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/376 (56%), Positives = 279/376 (74%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++G+++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISPVVEEIPQEIDGEEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHP+ KP P+ E++MM+ IF+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPDGKPPPETEEDMMLEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 A---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ +KE EK E A+ +R++ + G E+ +DSN ITPGTPFM L+A L
Sbjct: 121 SAQEAKEADEKKEEFAKLLRKQNGSKGGEGLVEEVITKTWDSNVITPGTPFMDVLAAALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR QR+ +HDPNT+H + G DAD
Sbjct: 181 YWVAYKLNTDPAWENLKIIISDATVPGEGEHKIMEFIRSQRSCAEHDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH + C G E N E G
Sbjct: 241 LIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHIAEACKGTAKEKNGEFDEKGKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
S ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL+I
Sbjct: 301 SPLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L R QLI+Q L ED IF++R+QTE
Sbjct: 381 GYLTKDGHVDLGRAQLILQGLAKQEDAIFRRRRQTE 416
>gi|327302674|ref|XP_003236029.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
gi|326461371|gb|EGD86824.1| 5'-3' exoribonuclease [Trichophyton rubrum CBS 118892]
Length = 1034
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 277/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +L+ DPGW+ +KVI+SDA VPGEGEHKIM++IR QRA P++DPNT+H + G DAD
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 NPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 568 EDEMPPDTVRLWEDGYADRYYEQKFGVNPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 627
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I ++D F GT
Sbjct: 628 TWYYPYHYAPFAADFVDIGKMDVQFTKGT 656
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 687 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEE 739
>gi|326479818|gb|EGE03828.1| hypothetical protein TEQG_02862 [Trichophyton equinum CBS 127.97]
Length = 1035
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 209/376 (55%), Positives = 277/376 (73%), Gaps = 8/376 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E A+ ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFAKLLKKQKRGKKDVTVAEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +L+ DPGW+ +KVI+SDA VPGEGEHKIM++IR QRA P++DPNT+H + G DAD
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITFG 293
LIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G E E G
Sbjct: 241 LIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAKEKRGEFDEKQKG 300
Query: 294 SEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ ++ FI++ +SVLREYL E+ +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSLEI
Sbjct: 301 NPLKPFIWLHVSVLREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLEI 360
Query: 353 REGAVDRLVNLYKKTV 368
RE +D L+ +++ +
Sbjct: 361 RENGIDTLIAIWRDNI 376
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 568 EDEMPPDTVRLWEDGYADRYYEQKFGVSPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 627
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I E+D F GT
Sbjct: 628 TWYYPYHYAPFAADFVDIGEMDVQFTKGT 656
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 687 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEE 739
>gi|356562399|ref|XP_003549459.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1065
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/370 (60%), Positives = 274/370 (74%), Gaps = 6/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP VIV +E++ ++G +IP D+S NPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P DE+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFDEVFECMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP+ E + FDSN ITPGT FMA LS L YY+H
Sbjct: 121 AAKDAADAAAEETRLREEFEKEGRKLPPKGESQT-FDSNVITPGTEFMAVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGW+ IKVILSDANVPGEGEHKIM YIR QR +DPNT+HCL G DADLIML
Sbjct: 180 LRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE F P Q + C +CGQMGH C G A E ++
Sbjct: 240 ALATHEIHFSILREVVFTPGQDK-CFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVAKK 298
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
F F+ + LREYLE E+ +PN PF FE +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 299 PFQFLNIWTLREYLEYEMRIPNPPFEIDFECIVDDFIFMCFFVGNDFLPHMPTLEIREGA 358
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 359 INLLIAVYKK 368
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGL 445
+ R DV S EE D+++L E G+K+RYY+ KF P++ A R V +Y GL
Sbjct: 525 ILREKSDVFNSKNAEE--DKIKLGEPGWKERYYDEKFSAKTPEELEAIRKDVVLKYTEGL 582
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YYY+G SW W++P+HYAPFASD + E+D +F+ GT
Sbjct: 583 CWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGT 625
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 33/36 (91%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
SPIIDFYP DF++D+NGK+FAWQG+A LPF+DE RL
Sbjct: 658 SPIIDFYPVDFEVDMNGKRFAWQGIAKLPFIDEVRL 693
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKR-----QQTETMFKMRNKMKKRRERQMKM 645
G+LT+ + L +V+ +Q +G ED+IF+KR +QTE + + + + ++ + + +
Sbjct: 375 GYLTNGSTINLSKVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAEPQF 434
Query: 646 AAQSTKAPSFIPGGQFAPQDSP 667
+S A S G + A +P
Sbjct: 435 KPESLVAVSRFHGSRLASAPNP 456
>gi|46138403|ref|XP_390892.1| hypothetical protein FG10716.1 [Gibberella zeae PH-1]
gi|115311956|sp|Q4HWE2.3|XRN2_GIBZE RecName: Full=5'-3' exoribonuclease 2
Length = 980
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 275/377 (72%), Gaps = 9/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS +YP +I +ED+P + +G IP D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAE----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + ++++ + E FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +K+I+SDA VPGEGEHKIM+++R QRA PDHDPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GH+ + C G + + + E
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
G ++ FI++ ++VLREYL EL +PNLPF + ERA+DDW+FMC FVGNDFLPHLP+LE
Sbjct: 301 GVALKPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPALE 360
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L ++K +
Sbjct: 361 IREHGIDTLTKIWKDNL 377
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 67/90 (74%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+S EE D+VRLWEDG+ DRYYE KF DI FR VG YV GL WVL YY+QGC
Sbjct: 552 TSAEEGPVDDVRLWEDGYADRYYEKKFHKDPKDIEFRHGVGRAYVEGLAWVLLYYFQGCP 611
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+WY+P+HYAPFA+DF +IA+++ +FE G
Sbjct: 612 SWEWYYPYHYAPFAADFKDIAKMNISFEKG 641
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF+IDLNGKKFAWQGVALLPF++ RL A+ Y +LS +S
Sbjct: 674 ESNIIDFYPEDFEIDLNGKKFAWQGVALLPFIEMPRLLAAVQSKYPELSAADS 726
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE-------TMFKMRNKMKKRRERQ 642
G++T G + LER Q+I+ L ED IFK+R++ E K++N++ R RQ
Sbjct: 382 GYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQEDRREANFKRRKLQNEVNGRGGRQ 440
>gi|403416696|emb|CCM03396.1| predicted protein [Fibroporia radiculosa]
Length = 1140
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 273/377 (72%), Gaps = 17/377 (4%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMN 56
GVPA FRWLS+KYP +I+ VE++ ++ N IP D S+PNPN MEFDNLYLDMN
Sbjct: 9 GVPALFRWLSKKYPKIILPVVEEEESKIPDVEGNEVVIPIDISRPNPNDMEFDNLYLDMN 68
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
I+HPCTHPE KPAP+ E+EMM+ +F+ +RL +VRPR+LL+MA+DGVAPRAKMNQQRS
Sbjct: 69 NIVHPCTHPEGKPAPETEEEMMLEVFKYTERLVNMVRPRRLLFMAVDGVAPRAKMNQQRS 128
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFR+S+E +K A G L E++ +DSN ITPGTPFM L++ L
Sbjct: 129 RRFRSSQEAKDKEEAHKEAIAMWEAMGKTLSEEEKNKKSWDSNAITPGTPFMDLLASSLR 188
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ ++N DPGW ++VI+SDANVPGEGEHKIM++IR+QR+ P HDPNT+H + G DAD
Sbjct: 189 YWVAHKMNTDPGWSQLQVIISDANVPGEGEHKIMEFIRRQRSNPGHDPNTRHVIYGLDAD 248
Query: 237 LIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAE---PNPESVIT 291
LIML LATHEP F ++RE+ F+ C +CGQ GH +C G AE P PE
Sbjct: 249 LIMLSLATHEPYFRVLREDVFFQEGSRTACRICGQEGHYAAQCTGQKAEISKPPPE---- 304
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ ++F+ +++LREYLE EL +P+ PFP++ E+A+DDWVF+ FFVGNDFLPHLPSLE
Sbjct: 305 ---KKPYVFLDVAILREYLEAELNLPHAPFPFNLEQAIDDWVFLIFFVGNDFLPHLPSLE 361
Query: 352 IREGAVDRLVNLYKKTV 368
IREGA+D L+ ++++ +
Sbjct: 362 IREGAIDTLLRIWREEL 378
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 23/132 (17%)
Query: 379 ENGGGGGRGVKRSFDDVDESSEEEESNDE-----------------------VRLWEDGF 415
E+ RG+KRS D++DE E S+DE V+LWE G+
Sbjct: 621 EDNSKDSRGIKRSVDEMDEDEENVGSDDEDTSLSATLALKVNPDGSVEQEDFVKLWEPGY 680
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
++RYY KF V D+ FR V Y+ G+ WVL+YYYQG SW+WY+P+H+APFASDF
Sbjct: 681 QERYYRQKFGVEYGDVEFRKKVAKHYIEGMAWVLQYYYQGTPSWQWYYPYHFAPFASDFK 740
Query: 476 NIAEVDTNFETG 487
+ F+ G
Sbjct: 741 TAQNMSIKFDPG 752
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPIIDFYP F+ID+NGKK AWQGVALLPF+DE RL A+ P Y L+ EE
Sbjct: 784 ESSPIIDFYPSTFQIDMNGKKMAWQGVALLPFIDERRLLDAMTPRYSNLTDEE 836
>gi|295660622|ref|XP_002790867.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281119|gb|EEH36685.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1053
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/397 (54%), Positives = 279/397 (70%), Gaps = 29/397 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP +I VE+ PQE++GQ++P D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIISSVVEELPQEIDGQEVPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID----------------- 103
PCTHPE KP P +E+EMM+ IF+ DR+ +VRPRKLL +A+D
Sbjct: 61 PCTHPEGKPPPSNEEEMMLEIFKYTDRVVNMVRPRKLLMIAVDVSLRTITLLSHYDDSVI 120
Query: 104 ----GVAPRAKMNQQRSRRFRA---SKETAEKIAEVAR-IREKLLADGCILPPEKEKGSH 155
GVAPRAKMNQQRSRRFR+ +KE EK E A+ +R++ C E+
Sbjct: 121 SEGNGVAPRAKMNQQRSRRFRSAQEAKEADEKKVEFAKLLRKQNGKKSCEEIVEEVIVKT 180
Query: 156 FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRK 215
+DSN ITPGTPFM L+A L Y++ +LN DP W+ +K+I+SDA VPGEGEHKIM++IR
Sbjct: 181 WDSNVITPGTPFMDILAAALRYWVAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRS 240
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHE 273
QR+ P+H+PNT+H + G DADLIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH
Sbjct: 241 QRSCPEHNPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQESKGRTCHLCGQTGHI 300
Query: 274 MKECVGLDAEPNPE-SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDD 331
+ C G E N E GS ++ FI++ +SVLREYL E+ +P PFP+ ERALDD
Sbjct: 301 AEACKGTAKEKNGEFDEKGKGSSLKPFIWLHVSVLREYLAVEMHVPQQPFPFDLERALDD 360
Query: 332 WVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
WVFMCFFVGNDFLPHLPSL+IRE +D L+ +++ +
Sbjct: 361 WVFMCFFVGNDFLPHLPSLDIRENGIDTLIAIWRDNI 397
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 349 SLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGV-------------------K 389
S+ + GA+ + K + QL + + G G+ K
Sbjct: 502 SMVVNRGAIYKANMANKSAAAAIKSQLFKGASSNGDSTGIDAEDSVDGATDASSPTHLGK 561
Query: 390 RSFDDVDESSEEEESN------------DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
R D +D +E E + D VRLWE+G+ DRYYE KF V DI FR V
Sbjct: 562 RKADALDTGTESETPSIKPQDNDDDLPPDTVRLWEEGYADRYYEQKFQVHPKDIEFRHKV 621
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
YV GL WVL YY+QGC SW WY+P+HYAPFA+DF+++ +++ F G
Sbjct: 622 ARAYVEGLAWVLLYYFQGCPSWTWYYPYHYAPFAADFVDLGKMNIEFNRGA 672
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F IDLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 704 NSEIIDFYPEEFPIDLNGKKFAWQGVALLPFIDEKRLLVAMEKRYHLLSSEE 755
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT G V L R QLI+Q L ED IF++R+QTE
Sbjct: 402 GYLTKDGHVDLNRAQLILQGLAKQEDAIFRRRRQTE 437
>gi|346979187|gb|EGY22639.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1013
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/378 (55%), Positives = 273/378 (72%), Gaps = 11/378 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP-QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VED+P Q +G IP D++ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKGSH---FDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G ILPPE + + FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM+Y+R QR PD+DPNT+H + G DA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIMLGLATHEP+F ++RE+ + +A+ C +CGQ GH+ + C G +A+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKG-EAKDKDGEYDEQD 299
Query: 294 SEVE---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
V+ FI++ +S+ REYL EL +P+LPF + ERA+DDWVFMC FVGNDFLPHLP+L
Sbjct: 300 KAVDLKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 351 EIREGAVDRLVNLYKKTV 368
EIRE +D L ++K+ +
Sbjct: 360 EIRENGIDALTTIWKENL 377
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 10/120 (8%)
Query: 378 EENGGGGGRGVKRSFDDVDESSE----------EEESNDEVRLWEDGFKDRYYESKFDVP 427
EE VKR D +DE S+ EE + D VR+WE+G+ DRYYE KF V
Sbjct: 533 EEGAAAASSVVKRKADVLDEPSQLTPNTGPSAAEEAAIDHVRMWEEGYADRYYEQKFHVD 592
Query: 428 KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
++D+AFR V YV GLCWVL YYYQGC SW WY+P+HYAPFA+DF ++ +++ +FE G
Sbjct: 593 RNDVAFRHKVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIEISFEKG 652
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS +IDFYP++F+IDLNGKKFAWQGVALLPF+D RL A+ Y LS E++
Sbjct: 684 EDSEVIDFYPQEFEIDLNGKKFAWQGVALLPFIDMPRLLAAVEKKYPLLSPEDA 737
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T G + L+RVQLIM L ED IF++R++ E R KRR+ Q + + +
Sbjct: 382 GYVTKDGHIDLKRVQLIMDGLAKQEDAIFRRRKEQE---DRREANAKRRKLQDERSGRGG 438
Query: 651 KAPSFIPGGQFAPQDS 666
+ + G P D+
Sbjct: 439 RTDASGRGRGKPPLDN 454
>gi|408399376|gb|EKJ78479.1| hypothetical protein FPSE_01288 [Fusarium pseudograminearum CS3096]
Length = 980
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/377 (54%), Positives = 274/377 (72%), Gaps = 9/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS +YP +I +ED+P + +G IP D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTRYPKIISPVIEDQPLVMEDGSTIPVDTTRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAP DE+EMM+ +F DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPTDEEEMMMEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAE----VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + ++++ + E FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAQEKEQDKQELIKMLKQQNGGNLSTESLETVTKKAFDSNSITPGTPFMDILALSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +K+I+SDA VPGEGEHKIM+++R QRA PDHDPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPGWAKLKIIISDATVPGEGEHKIMNFVRSQRASPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPE-SVITF 292
DLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GH+ + C G + + + E
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDQKARLCKICGQKGHDAQNCRGEEKKKDGEHDEKDK 300
Query: 293 GSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
G ++ FI++ ++VLREYL EL +PNLPF + ERA+DDW+FMC FVGNDFLPHLP+LE
Sbjct: 301 GVALKPFIWLHVAVLREYLAVELGVPNLPFRFDLERAVDDWIFMCCFVGNDFLPHLPALE 360
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L ++K +
Sbjct: 361 IREHGIDTLTKIWKDNL 377
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 65/87 (74%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
EE D+VRLWEDG+ DRYYE KF DI FR VG YV GL WVL YY+QGC SW+
Sbjct: 555 EEGPVDDVRLWEDGYADRYYEKKFHKDPKDIEFRHGVGRAYVEGLAWVLLYYFQGCPSWE 614
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P+HYAPFA+DF +IA+++ +FE G
Sbjct: 615 WYYPYHYAPFAADFKDIAKMNISFEKG 641
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF+IDLNGKKFAWQGVALLPF++ RL A+ Y +LS +S
Sbjct: 674 ESNIIDFYPEDFQIDLNGKKFAWQGVALLPFIEMPRLLAAVQSKYPELSAADS 726
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKK 637
G++T G + LER Q+I+ L ED IFK+R++ E + K +K
Sbjct: 382 GYVTKDGHIDLERAQVILDGLAQQEDNIFKRRKEQEDRREANFKRRK 428
>gi|429849601|gb|ELA24966.1| GTPase-activator protein for Ras-like GTPase, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 3409
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/379 (54%), Positives = 273/379 (72%), Gaps = 19/379 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E++P +++ G +IP D++ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMDDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLL--ADGCILPPEKEKG---SHFDSNCITPGTPFMARLSAC 174
R++++ +K + + KLL +G ++P E + FDSN ITPGTPFM L+A
Sbjct: 121 RSAQDAQQKEEDKEEVM-KLLKQQNGGVIPEETLESMTKKAFDSNSITPGTPFMDILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +L+ DP W +K+I+SDA VPGEGEHKIM ++R QR PD+DPNT+H + G D
Sbjct: 180 LRYWCAYKLSTDPAWARLKIIISDATVPGEGEHKIMSFVRSQRISPDYDPNTRHVIYGLD 239
Query: 235 ADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
ADLIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GHE + C G E V F
Sbjct: 240 ADLIMLGLATHEPHFRVLREDVFFQDSKPRVCRICGQKGHEARNCRG----EAKEKVGEF 295
Query: 293 GSEVE------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
+ + FI++ +S+LREYL EL +P LPF + ERALDDWVFMC FVGNDFLPH
Sbjct: 296 DEQEKAPALKPFIWLHVSILREYLAVELNVPGLPFRFDLERALDDWVFMCCFVGNDFLPH 355
Query: 347 LPSLEIREGAVDRLVNLYK 365
LP+LEIRE +D L ++K
Sbjct: 356 LPALEIRENGIDTLTAIWK 374
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S+ EE + D VR+WE+G+ DRYYE KF V + DI FR V YV GL WVL YY+QGC
Sbjct: 551 SAAEEAAMDHVRMWEEGYADRYYEQKFHVDRKDIEFRHQVARAYVEGLSWVLLYYFQGCP 610
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+WY+P+HYAPFA+DF+ + +++ FE G
Sbjct: 611 SWEWYYPYHYAPFAADFVELDKMEIAFEKG 640
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS +IDFYP DF+IDLNGKK AWQGVALLPF++ RL A+ Y LS +
Sbjct: 672 EDSEVIDFYPTDFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAAD 724
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
G++T G V L R QLI+ L ED IFK+R++ E + K +K +E +
Sbjct: 382 GYVTKDGHVDLARAQLILNGLAKQEDGIFKRRKEQEDRREANAKRRKLQEER 433
>gi|389640341|ref|XP_003717803.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
gi|351640356|gb|EHA48219.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae 70-15]
Length = 1020
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/383 (54%), Positives = 273/383 (71%), Gaps = 21/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +EDKP E+ +G IP D +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPED+PAP+DE+EMM+ IF+ DR+F +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLL----ADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L D E FD+N ITPGTPFM L+ L
Sbjct: 121 RSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKKAFDTNSITPGTPFMDILAGSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +K+I+SDA VPGEGEHKIMD++R QR+ PDHDPNT+H + G DA
Sbjct: 181 RYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVRSQRSSPDHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVG--------LDAEPN 285
DLIMLGLATHEP+F ++RE+ F+ + R C +CGQ GH+ ++C G D + N
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGHDAQQCKGEVKKKEGEFDEKQN 300
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
E + FI++ +++LREYL EL +P+LPF + ERA+DDW+F+C FVGNDFLP
Sbjct: 301 AEPLKP------FIWLHVAILREYLNVELYVPDLPFRFDLERAVDDWIFLCCFVGNDFLP 354
Query: 346 HLPSLEIREGAVDRLVNLYKKTV 368
HLP+LEIRE + L +++K+ +
Sbjct: 355 HLPALEIRENGIITLTSIWKQNL 377
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+S E+ D VRLWEDG+ DRYYE KF V ++ FR V H YV GL WVL YY+QGC
Sbjct: 540 ASGNGEAVDTVRLWEDGYTDRYYEQKFHVDPKNVEFRHKVAHAYVEGLSWVLLYYFQGCP 599
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+W++P+HYAPFA DF+ + +++ +FE G
Sbjct: 600 SWEWFYPYHYAPFAQDFVGLKDLEISFEKG 629
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF++DLNGKKFAWQGVALLPF++ +RL A+ Y +LS +E+
Sbjct: 661 EDSEIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDRLLAAVQAKYPELSADEA 714
Score = 47.0 bits (110), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T G + LERVQ IM L ED IF+KR++ E K +K ++ + K S
Sbjct: 382 GYVTKDGHIDLERVQYIMDGLAKQEDSIFRKRKEQEDRRDANAKRRKMQDDRAKWGNNSA 441
Query: 651 KAP 653
P
Sbjct: 442 NGP 444
>gi|255557927|ref|XP_002519992.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223540756|gb|EEF42316.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 1545
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/563 (42%), Positives = 322/563 (57%), Gaps = 91/563 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F++WL+ KYP +V +E + + NG +P +++ PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGIPSFYKWLTEKYPDTVVDVIEARRRMGNGVLLPINTALPNPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D P PK +E+ +F ID++F +VRPRKLL++ IDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPSDLPPPKTYEEVFRNVFMYIDKIFSMVRPRKLLFLGIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE AEK E ++++ + +G KE DSN ITPGT FM LS+ L YYI
Sbjct: 121 AAKE-AEK--EALKMKQFIELEGENSTSLKEPAV-LDSNVITPGTEFMDLLSSALRYYIR 176
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
R+N D GW+GIKVILSD+NVPGEGEHKIM YIR QR P +DPNT+HCL G DADLIML
Sbjct: 177 LRVNRDSGWRGIKVILSDSNVPGEGEHKIMSYIRLQRDLPGYDPNTRHCLYGLDADLIML 236
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE------------- 287
LATHE +FTI+RE VC Q H K NP+
Sbjct: 237 ALATHEVHFTILRE-----------VCAQK-HSSKRGKKHKFVWNPQKKANSKKKKWMPV 284
Query: 288 -SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
++ + S + F F+ + LRE+LE ++ +PNL ER +DD++FMC FVGNDFLPH
Sbjct: 285 KTLEEYVSRLNFKFLYIWALREHLEYDMRIPNLALQTDLERLIDDFIFMCLFVGNDFLPH 344
Query: 347 LPSLEIREGAVDRL--------------------------------VNLYKKTVYKTQEQ 374
+P+LEI +GA+D L V L+ +++ Q
Sbjct: 345 IPTLEISQGAIDLLMKVYRKEFRRMGGYLTNSFELDLTRVEHFIQAVGLHDDAIFRQHIQ 404
Query: 375 LRQEENGGGGGRGVKRSFDDVDESSEEEESN---------------------------DE 407
+E++ R KR + + ++ ES D
Sbjct: 405 KLKEKSARKEERSSKRKLEKLLQNDPHAESISGGSSLLMEKAGGMNFDEPIHHLSAGIDT 464
Query: 408 VRLWEDGFKDRYYESKFDVPKDDI--AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
ED +K+RYY KF D + R V +Y+ GLCWV++YYY+G SW+W++P+
Sbjct: 465 GDKEEDDWKERYYAKKFKAKTKDEQESIRRDVVIKYMEGLCWVMRYYYEGVCSWQWFYPY 524
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
HYAPFASDF + ++ F G
Sbjct: 525 HYAPFASDFYGLDDLKIQFTLGV 547
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI+DFYP DF++D+NGK+ WQ + LPF+DE RL + L+ +E
Sbjct: 578 ESSPILDFYPSDFELDMNGKRRKWQAICKLPFIDESRLLSEITKVEHTLTDDE 630
>gi|452983794|gb|EME83552.1| hypothetical protein MYCFIDRAFT_196796 [Pseudocercospora fijiensis
CIRAD86]
Length = 823
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 269/379 (70%), Gaps = 16/379 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP +I VE++P E+ + KIP D+ PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIISPVVEEQPGEIANEDGSVTKIPIDARGPNPNGEEMDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPC+HPED+P P +E+EMMVAIFE +R+ +VRPRKLL +A+DGVAPRAKMNQQR
Sbjct: 61 NGIVHPCSHPEDRPPPANEEEMMVAIFEYTERVVNMVRPRKLLMIAVDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH----FDSNCITPGTPFMARL 171
SRRFR+++E AEK A A +++A G + EK S +DSN ITPGTPFM L
Sbjct: 121 SRRFRSAQEAAEKDAMAAEFHARMVAAGEA-GGDDEKNSKPKKTWDSNSITPGTPFMDLL 179
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
+A L Y+I +L DP W+ +KVI+SDA VPGEGEHKIM+++R QR+ PDHDPNT+H +
Sbjct: 180 AASLRYWISYKLTTDPAWEKLKVIISDATVPGEGEHKIMNFVRSQRSSPDHDPNTRHVIY 239
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESV 289
G DADLIMLGLATHEP+F ++RE+ N +P C C Q GH C G E E V
Sbjct: 240 GLDADLIMLGLATHEPHFRVLREDVFANDTKPGHCRKCNQPGHIAANCTGKPKE--EEDV 297
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
+ FI++ + +LREYL E+ +PN F + ERALDDWVFMCFFVGNDFLPHLPS
Sbjct: 298 VK--PLKPFIWLHVGILREYLAVEMCVPNQGFRFDLERALDDWVFMCFFVGNDFLPHLPS 355
Query: 350 LEIREGAVDRLVNLYKKTV 368
L+IRE +D L+ +++ +
Sbjct: 356 LDIREDGIDTLIAIWRDNL 374
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM--KMAAQ 648
G++T G V L R Q+I++ L ED IFK+R++TE R K ++ RER+ K A
Sbjct: 379 GYVTKDGHVDLARAQMILEGLAKQEDAIFKRRRETEVKAAERQKQREDRERRQSNKRARY 438
Query: 649 STKAPS 654
S AP+
Sbjct: 439 SNGAPT 444
>gi|296813543|ref|XP_002847109.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
gi|238842365|gb|EEQ32027.1| 5'-3' exoribonuclease 2 [Arthroderma otae CBS 113480]
Length = 1027
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/388 (54%), Positives = 278/388 (71%), Gaps = 20/388 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D++KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDTTKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETA---EKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++++ EK E AR ++++ + E+ +D+N ITPGTPFM L+ L
Sbjct: 121 SAQDAKAEDEKKVEFARLLKKQKRGKTDVTIAEEVITKTWDTNVITPGTPFMDILALALR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA--- 233
Y++ +L+ DPGW+ +KVI+SDA VPGEGEHKIM++IR QRA P++DPNT+H + G
Sbjct: 181 YWVAYKLSTDPGWEKLKVIISDATVPGEGEHKIMEFIRSQRACPEYDPNTRHVIYGLVSD 240
Query: 234 ---------DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDA 282
DADLIMLGL THEP+F ++RE+ F+ ++AR C +CGQ GH + C G
Sbjct: 241 TNIYTSRLDDADLIMLGLGTHEPHFRVLREDVFFQESKARTCKLCGQAGHVEEACTGKAK 300
Query: 283 EPNPE-SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVG 340
E E GS ++ FI++ +S+LREYL E+ +P PFP+ ERALDDWVFMCFFVG
Sbjct: 301 EKQGEFDEKQKGSPLKPFIWLHVSILREYLAVEMQVPQQPFPFDLERALDDWVFMCFFVG 360
Query: 341 NDFLPHLPSLEIREGAVDRLVNLYKKTV 368
NDFLPHLPSLEIRE +D L+ +++ +
Sbjct: 361 NDFLPHLPSLEIRENGIDTLIAIWRDNI 388
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+++ E+E D VRLWEDG+ DRYYE KF V + DIAFR V YV GL WVL YY+Q
Sbjct: 565 LEKPKEDEMPPDTVRLWEDGYADRYYEQKFKVDRKDIAFRHKVARAYVEGLSWVLLYYFQ 624
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GC SW WY+P+HYAPFA+DF++I +D F G
Sbjct: 625 GCPSWTWYYPYHYAPFAADFVDIGAMDVQFTKG 657
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL KA+ Y LS EE
Sbjct: 689 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLKAMDKRYPLLSEEE 741
>gi|302418923|ref|XP_003007292.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261352943|gb|EEY15371.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 894
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 274/379 (72%), Gaps = 13/379 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP-QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VED+P Q +G IP +++ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKGSH---FDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G ILPPE + + FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM+Y+R QR PD+DPNT+H + G DA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVG----LDAEPNPESV 289
DLIMLGLATHEP+F ++RE+ + +A+ C +CGQ GH+ + C G D E + +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDK 300
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
+ FI++ +S+ REYL EL +P+LPF + ERA+DDWVFMC FVGNDFLPHLP+
Sbjct: 301 AV--ALKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPA 358
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIRE +D L ++K+ +
Sbjct: 359 LEIRENGIDALTTIWKENL 377
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 69/90 (76%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S+ EE + D VR+WE+G+ DRYYE KF V ++DIAFR V YV GLCWVL YYYQGC
Sbjct: 563 SAAEEAAIDHVRMWEEGYADRYYEQKFHVDRNDIAFRHKVAQAYVEGLCWVLLYYYQGCP 622
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW WY+P+HYAPFA+DF ++ +++ +FE G
Sbjct: 623 SWDWYYPYHYAPFAADFADLDKIEISFEKG 652
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQG 689
+DS +IDFYP++F+IDLNGKKFAWQ
Sbjct: 684 EDSEVIDFYPQEFEIDLNGKKFAWQA 709
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T G + L+RVQLIM L ED IFK+R++ E R KRR+ Q + + +
Sbjct: 382 GYVTKDGHIDLKRVQLIMDGLAKQEDAIFKRRKEQED---RREANAKRRKLQDERSGRGG 438
Query: 651 KAPSFIPGGQFAPQDS 666
+A + G P D+
Sbjct: 439 RADASGRGRGKPPMDN 454
>gi|224082986|ref|XP_002306919.1| predicted protein [Populus trichocarpa]
gi|222856368|gb|EEE93915.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/372 (60%), Positives = 273/372 (73%), Gaps = 8/372 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P + G KIP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSKPNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFGEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ ++ AE R+RE+ +G LPP KE FDSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDASDAAAEEERLREEFEREGRKLPP-KETSQTFDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKV+LSDANVPGEGEHK+M YIR QR P +DPNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKKIKVVLSDANVPGEGEHKVMSYIRLQRNLPGYDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-- 297
LATHE +F+I+RE F P Q C +CGQ GH C G A+ G++V
Sbjct: 240 ALATHEVHFSILREIVFTPGQQDKCFICGQAGHLAAACEG-KAKRKAGEFDEKGNDVAVP 298
Query: 298 ---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ F+ + LREYLE E +PN PF ER +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 KKPYQFLNIWTLREYLEYEFRIPNPPFEIDLERTVDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 355 GAVDRLVNLYKK 366
GA++ L+ +YKK
Sbjct: 359 GAINLLMAVYKK 370
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDI--AFRLMVGHEYVLGLCW 447
R DV S EE D+V+L E G+K+RYYE KF D A R V Y GLCW
Sbjct: 523 REKSDVFNSKNHEE--DKVKLGEPGWKERYYEEKFSAKSLDEMEAVRRDVVLRYTEGLCW 580
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD ++ +++ +FE G+
Sbjct: 581 VMHYYYEGVCSWQWFYPYHYAPFASDLTDLGQLNISFELGS 621
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPI DFYP DF++D+NGK+FAWQG+A LPF+DE RL + L+ EE+
Sbjct: 653 NSPIFDFYPTDFEVDMNGKRFAWQGIAKLPFIDEARLLAEVQKIEHTLTEEEA 705
>gi|388857586|emb|CCF48735.1| related to dna exoribonuclease Dhp1p [Ustilago hordei]
Length = 1245
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 266/379 (70%), Gaps = 11/379 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQK-----IPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ E P+ G +P D+S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVTSVQEQDPKTAPGPDGSEIVLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMM+ +F +R+ +VRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPESEEEMMIEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
SRRFRA+KE EK E + A G I + +DSN ITPGTPFM L+A
Sbjct: 121 SRRFRAAKEAREKHQENESALAEWKAKGLPITDHALQSKKAWDSNAITPGTPFMDLLAAS 180
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N DPGWK ++VI+SDA+VPGEGEHKIM++IR+QR+ P+HDPNT+H + G D
Sbjct: 181 LRYWVAQKINTDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGL---DAEPNPESV 289
ADLIML LATHEP F ++RE+ N+ + C++CGQ GH C G + + E
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFASDNKPKTCNICGQPGHFAASCKGSPKNKSGEHDEKA 300
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
T + FIF+ L LREYL+ EL +P LPF + ERA+DDWVF+ FFVGNDFLPHLPS
Sbjct: 301 QTPPDKKPFIFLDLPTLREYLQVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIR+GA+D L+ ++KK +
Sbjct: 361 LEIRDGAIDTLLRIWKKEL 379
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 57/83 (68%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D V++WE G+++RYY KF V D FR V Y+ GL WVL YYYQG SW+WY+PF
Sbjct: 641 DTVKMWEPGYRERYYREKFGVDLSDTDFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYYPF 700
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
H++PFA+DF ++A +D FE G
Sbjct: 701 HFSPFAADFEDLASLDIKFELGA 723
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYP +F+ID+NGKK AWQGVALLPF+DE+RL AL Y LS +E
Sbjct: 755 DSEIIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALKDKYPLLSEDE 806
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ LI V +L L I + T+ K + + G+LT+ G V+L
Sbjct: 341 DDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLLRIWK-----KELPSMGGYLTNHGKVELS 395
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMF----KMRNKMKKRRERQM 643
R QLI+ L ED+IF++R++ E K R +++RRE+++
Sbjct: 396 RAQLILNGLASEEDDIFRRRKEDEDRRENNKKRREAIQQRREKEL 440
>gi|345562792|gb|EGX45805.1| hypothetical protein AOL_s00117g10 [Arthrobotrys oligospora ATCC
24927]
Length = 1102
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/372 (53%), Positives = 267/372 (71%), Gaps = 5/372 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
+ VPAFFRWLS+KYP +I +E PQE++G +IP D++ PNPNG E DNLYLDMNGI+H
Sbjct: 46 LSVPAFFRWLSQKYPKIISPVLEALPQEIDGHEIPVDTTGPNPNGEELDNLYLDMNGIVH 105
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+P P+ E EMM+ +F +R+ +VRPRK+L MA+DGVAPRAKMNQQRSRRFR
Sbjct: 106 PCSHPEDRPPPETEQEMMLEVFRYTERVVAMVRPRKVLMMAVDGVAPRAKMNQQRSRRFR 165
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E EK +VA + L + G + +K +DSN ITPGTPFM LS L Y++
Sbjct: 166 SAQEAKEKEEQVAEFVKLLASKGTDIDSNLQKKG-WDSNAITPGTPFMDILSIALKYWVA 224
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+LN DPGW +K+I+SD++VPGEGEHKIM+++R QR+ P+HDPNT+H + G DADLIML
Sbjct: 225 HKLNTDPGWAKLKIIISDSSVPGEGEHKIMEFVRGQRSHPEHDPNTRHVIYGLDADLIML 284
Query: 241 GLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE--SVITFGSEV 296
GLATHEP+F ++RE+ ++P C +C Q GH +EC G E E
Sbjct: 285 GLATHEPHFRVLREDVFAQDSKPRVCKICNQKGHRAEECTGKAREKEGEFDEKSKANPRK 344
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
FI++ + +LREYL EL +P L F + ERA+DDWVF+CFFVGNDFLPH PSLEIR+
Sbjct: 345 PFIWLDVGILREYLAVELHVPGLSFQWDLERAIDDWVFLCFFVGNDFLPHFPSLEIRDAG 404
Query: 357 VDRLVNLYKKTV 368
+D L +++++ +
Sbjct: 405 IDTLTSIWRENL 416
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 63/91 (69%)
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
E++ E + D V+LWE G++DRYYE KF P D FR V + YV GLCWVL YY+QGC
Sbjct: 592 EAAPGEGNADTVKLWEPGYRDRYYEQKFGRPPSDTNFRREVANAYVEGLCWVLLYYFQGC 651
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW WY+P+HYAPFA DF NI E+ NF G
Sbjct: 652 PSWTWYYPYHYAPFAQDFENIGELKINFTLG 682
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++S IIDFYPEDF IDLNGKKFAWQGVA+LPF+DE RL A+ Y ++ EE E
Sbjct: 714 ENSEIIDFYPEDFPIDLNGKKFAWQGVAILPFIDETRLLDAMNKIYPQIPAEEKE 768
Score = 45.8 bits (107), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE 640
GF+T G+V LER Q I+ L ED IF+KR+Q E + K +K +E
Sbjct: 421 GFVTTDGNVNLERAQFILDGLAKQEDAIFRKRRQVEERREANAKRRKLQE 470
>gi|380484893|emb|CCF39710.1| XRN 5'-3' exonuclease [Colletotrichum higginsianum]
Length = 1015
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/381 (54%), Positives = 273/381 (71%), Gaps = 17/381 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E++P ++ +G +IP D++ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTTGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G ++ E FDSN ITPGTPFM L+A L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQNGGVVSDDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM+++R QR PD DPNT+H + G DA
Sbjct: 181 RYWCAYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRISPDFDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GHE + C G E V F
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARMCKLCGQKGHEARACRGQAK----EKVGEFD 296
Query: 294 SEVE------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ + FI++ +S+LREYL EL +P LPF + ERA+DDWVFMC FVGNDFLPHL
Sbjct: 297 EQEKNLALKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHL 356
Query: 348 PSLEIREGAVDRLVNLYKKTV 368
P+LEIRE +D L ++K +
Sbjct: 357 PALEIRENGIDTLTAIWKDNL 377
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 71/112 (63%)
Query: 376 RQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
+ EE G + S+ EE + D VR+WE+G+ DRYYE KF V + D FR
Sbjct: 528 KAEEAAAQAGSTPASATGPSTPSAAEEAAVDHVRMWEEGYADRYYEQKFHVDRSDHEFRH 587
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V YV GL WVL YY+QGC SW+WY+P+HYAPFA+DF+++ +++ FE G
Sbjct: 588 KVARAYVEGLSWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLDKMEVQFEKG 639
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS +IDFYP +F+IDLNGKK AWQGVALLPF++ RL A+ Y LS +
Sbjct: 671 EDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAAD 723
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQT----ETMFKMRNKMKKRRERQMK 644
G++ G V L R QLI+ L ED IFK+R++T E FK R ++R R K
Sbjct: 382 GYVVKDGHVDLGRAQLILNGLAKQEDAIFKRRKETEDRKEASFKRRKLQEERNPRFAK 439
>gi|356553393|ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 1075
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 223/373 (59%), Positives = 278/373 (74%), Gaps = 12/373 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP VIV +E++P ++G +IP D+SK NPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P DE+ +F+ IDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE AR+RE+ +G LP + E + FDSN ITPGT FMA LS L YY+H
Sbjct: 121 AAKDAADAAAEEARLREEFEKEGRKLPSKGESQT-FDSNVITPGTEFMAVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLNNDPGW+ IKVILSDANVPGEGEHKIM YIR QR +DPNT+HCL G DADLIML
Sbjct: 180 LRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGL------DAEPNPESVITFG 293
LATHE +F+I+RE F P Q + C +CGQMGH C G + + E+++T
Sbjct: 240 ALATHEIHFSILREIVFTPGQDK-CFLCGQMGHMAANCEGKAKRKAGEFDEKGEAIVT-- 296
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ F F+ + LREYLE E+ + N P F+ +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 297 -KKPFQFLNIWTLREYLEYEMRISNPPSEIDFDCIVDDFIFMCFFVGNDFLPHMPTLEIR 355
Query: 354 EGAVDRLVNLYKK 366
EGA++ L+ +YKK
Sbjct: 356 EGAINLLIAVYKK 368
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGL 445
+ R DV S EE D+++L E G+K+RYYE KF P++ A R V +Y GL
Sbjct: 525 ILREKSDVFNSKNAEE--DKIKLGEPGWKERYYEEKFSAKTPEELEAIRKDVVLKYTEGL 582
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YYY+G SW W++P+HYAPFASD + E+D +F+ GT
Sbjct: 583 CWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDISFKLGT 625
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 34/37 (91%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+SPIIDFYP DF++D+NGK+FAWQG+A LPF+DE RL
Sbjct: 657 NSPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDEVRL 693
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKR-----QQTETMFKMRNKMKKRRERQMKM 645
G+LT+ + L RV+ +Q +G ED+IF+KR +QTE + + + + ++ + + +
Sbjct: 375 GYLTNGSTINLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAEPQF 434
Query: 646 AAQSTKAPSFIPGGQFAPQDSP 667
+S A S G + A +P
Sbjct: 435 QPESLVAVSRFHGSRLASAPTP 456
>gi|340992664|gb|EGS23219.1| hypothetical protein CTHT_0008830 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1066
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/386 (55%), Positives = 279/386 (72%), Gaps = 27/386 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VE++P + +G +IP D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEERPIVMPDGTEIPVDATRPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPEDKPAPKDE+EMM+ IF+ DR+ ++VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPKDEEEMMIEIFKYTDRIVKMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-------------FDSNCITPGTP 166
RA++E EK E ++ + L KEKGS+ FDSN ITPGTP
Sbjct: 121 RAAQEAKEKEEEKKQLLKML---------RKEKGSNMQEEPLETVVKKAFDSNSITPGTP 171
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT 226
FM L+A L Y+ +LN DP W +KVI+SDA VPGEGEHKIM++IR QR+ P+H+PNT
Sbjct: 172 FMDILAASLRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFIRSQRSSPEHNPNT 231
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEP 284
+H + G DADLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GH+ + C G +
Sbjct: 232 RHVIYGLDADLIMLGLATHEPHFRVLREDVFFQEAKARLCKLCGQKGHDERSCKGEAKQK 291
Query: 285 NPESVITFGSEV--EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGND 342
E ++ FI++ +S+LREYL EL +PNLPF + ERA+DDWVF+CFFVGND
Sbjct: 292 QGEFDEKDHAQPLKPFIWLHVSILREYLAAELEVPNLPFRWDLERAIDDWVFLCFFVGND 351
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTV 368
FLPHLP+LEIRE +D L ++K +
Sbjct: 352 FLPHLPALEIRENGIDTLTAIWKDNL 377
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S+ E D VRLWE+G+ DRYYE KF V DI FR VG Y GL WVL+YYYQGC
Sbjct: 562 GSDNEGPVDTVRLWEEGYADRYYEQKFKVDPKDIEFRHKVGRAYAEGLAWVLQYYYQGCP 621
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+W++P+HYAPFA+DF+++A+++ FE G
Sbjct: 622 SWEWFYPYHYAPFAADFVDLAKMEIKFEKG 651
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPE+F+IDLNGKK AWQGVALLPF++ RL A+ LS E+
Sbjct: 684 NSPIIDFYPEEFEIDLNGKKMAWQGVALLPFIEMPRLLAAMKEREHLLSEED 735
>gi|322709893|gb|EFZ01468.1| 5'->3' exoribonculease Dhp1 [Metarhizium anisopliae ARSEF 23]
Length = 930
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/378 (55%), Positives = 272/378 (71%), Gaps = 11/378 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G +P D+S NPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSIVPVDTSSRNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPEDKPAP+DE+ MM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMARLSACL 175
R++++ EK + + + +G +LPP E FD+N ITPGTPFM L+ L
Sbjct: 121 RSAQDAKEKEENKKELLKLVKQQNGGVLPPDHIESVAKKVFDNNSITPGTPFMDILAVSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +KV++SDA VPGEGEHKIM +IR QRA P++DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GHE + C G +A+ + V
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGRARTCQLCGQKGHEARNCRG-EAKEKADDVDDKP 299
Query: 294 SEVE---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
V FI++ +SVLREYL ELA+P LPF + ERA+DDWVFMC FVGNDFLPHLP+L
Sbjct: 300 GNVTLKPFIWLHVSVLREYLAAELAVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHLPAL 359
Query: 351 EIREGAVDRLVNLYKKTV 368
EIRE +D L +++ +
Sbjct: 360 EIREHGIDTLTTIWRNNL 377
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+ + E+ D VRLWEDG+ DRYY+ KF DDI+FR V YV GL WVL YY+Q
Sbjct: 551 TEHPASAEDHIDTVRLWEDGYADRYYQQKFHRSPDDISFRHEVARAYVEGLAWVLLYYFQ 610
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GC SW+WY+P+HYAPFA+DF ++A +D FE G
Sbjct: 611 GCPSWEWYYPYHYAPFAADFKDLANMDIIFEKG 643
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF++DLNGKK AWQGVALLPF+D RL A+ Y LS E+
Sbjct: 675 EDSEIIDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQTKYPLLSSAEA 728
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ + V +L L I + T+T + + + T G++T G + LE
Sbjct: 339 DDWVFMCCFVGNDFLPHLPALEIREHGIDTLTTIWR-----NNLPTMGGYVTKDGHIDLE 393
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
R Q I+ L EDEIFK+R++ E R KRR+ Q
Sbjct: 394 RAQRILDGLAKQEDEIFKRRKEQE---DRREANAKRRKLQ 430
>gi|345487550|ref|XP_001601647.2| PREDICTED: 5'-3' exoribonuclease 2 homolog [Nasonia vitripennis]
Length = 828
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/241 (83%), Positives = 215/241 (89%), Gaps = 3/241 (1%)
Query: 132 VARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKG 191
+ARIR +L G LPPEK K HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWK
Sbjct: 1 MARIRSELALKGAFLPPEKPKEDHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKN 60
Query: 192 IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTI 251
IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH LCGADADLIMLGLATHEPNFTI
Sbjct: 61 IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHVLCGADADLIMLGLATHEPNFTI 120
Query: 252 IREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN-PESVITFGSEVEFIFVRLSVLREYL 310
IREEFKPN+ RPCD+CGQ+GH+M++C+G AEPN E FGSE +FIFVRL+VLREYL
Sbjct: 121 IREEFKPNKPRPCDICGQLGHDMQDCLG--AEPNKKEEEKIFGSECQFIFVRLNVLREYL 178
Query: 311 EKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
E+EL MPNLPF Y FERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLV LYKKTVYK
Sbjct: 179 ERELQMPNLPFKYDFERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVTLYKKTVYK 238
Query: 371 T 371
T
Sbjct: 239 T 239
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/118 (64%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIA 432
E++ E G RG KR ++V E E+E+++DEVRLWEDGFKDRYYESKFDV D++A
Sbjct: 354 EKMIVPEGESSGSRGQKRKHEEV-EKEEDEQAHDEVRLWEDGFKDRYYESKFDVLPDNLA 412
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
FR V +YV GLCWVL+YYYQGC SWKWYFP+HYAPFASDFINI + T FE GT P
Sbjct: 413 FRNNVALQYVRGLCWVLRYYYQGCASWKWYFPYHYAPFASDFINIGGLSTEFERGTIP 470
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/53 (84%), Positives = 48/53 (90%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL KAL PYY +L+V E +
Sbjct: 502 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLFKALEPYYGQLTVAEKK 554
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
GFLT+SGDV L+RVQLI+ DLG +EDEIFKKRQQ E FK R K K+RR A S
Sbjct: 241 GFLTNSGDVNLDRVQLILNDLGNVEDEIFKKRQQNELAFKAREKNKRRRNE-----AISN 295
Query: 651 KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKFAWQGV 690
PS+ P GQFAP P+ + E +++ + G+ + V
Sbjct: 296 YKPSWTPVGQFAPNPLGKEVKPVQNARYEAYQMRVQGRNYNTSAV 340
>gi|310796685|gb|EFQ32146.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1020
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/381 (54%), Positives = 272/381 (71%), Gaps = 17/381 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E++P ++ +G +IP D+ PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEEQPVKMEDGSEIPVDTMGPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L G I+ E FDSN ITPGTPFM L+A L
Sbjct: 121 RSAQEAQEKEEDKQELLKLLKQQSGGIVSNDSLESVTKKAFDSNSITPGTPFMDILAASL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM+++R QR PD+DPNT+H + G DA
Sbjct: 181 RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNFVRSQRISPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIMLGLATHEP+F ++RE+ F+ ++A+ C +CGQ GHE + C G E V F
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKAKMCKLCGQKGHEARACRGQAK----EKVGEFD 296
Query: 294 SEVE------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ + FI++ +S+LREYL EL +P LPF + ERA+DDWVFMC FVGNDFLPHL
Sbjct: 297 EQEKGPALKPFIWLHVSILREYLAAELNVPGLPFRFDLERAIDDWVFMCCFVGNDFLPHL 356
Query: 348 PSLEIREGAVDRLVNLYKKTV 368
P+LEIRE +D L ++K +
Sbjct: 357 PALEIRENGIDTLTAIWKDNL 377
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 67/90 (74%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
S+ EE + D VR+WE+G+ DRYYE KF V ++D FR V YV GL WVL YY+QGC
Sbjct: 550 SAAEEAAVDHVRMWEEGYADRYYEQKFHVDRNDHEFRHKVARAYVEGLSWVLLYYFQGCP 609
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+WY+P+HYAPFA+DF+++ ++D FE G
Sbjct: 610 SWEWYYPYHYAPFAADFVDLDKMDVRFEKG 639
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS +IDFYP +F+IDLNGKK AWQGVALLPF++ RL A+ Y LS +
Sbjct: 671 EDSEVIDFYPTEFEIDLNGKKMAWQGVALLPFIEMPRLLAAVEKKYPLLSAAD 723
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQT----ETMFKMRNKMKKRRERQMK 644
G++ G V L R QLI+ L ED IFK+R++T E FK R ++R R K
Sbjct: 382 GYVVKDGHVDLGRAQLILNGLAKQEDSIFKRRKETEDRREANFKRRKLQEERNPRFAK 439
>gi|116204849|ref|XP_001228235.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
gi|115311955|sp|Q2GNZ6.3|XRN2_CHAGB RecName: Full=5'-3' exoribonuclease 2
gi|88176436|gb|EAQ83904.1| hypothetical protein CHGG_10308 [Chaetomium globosum CBS 148.51]
Length = 1039
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/387 (54%), Positives = 275/387 (71%), Gaps = 28/387 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VE+K + +G +P D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEEKALVMEDGTVVPVDATQPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI-DGVAPRAKMNQQRSRR 118
HPC+HPED+PAP DE+EMMV +F+ +R+ +VRPRKLL +A+ DGVAPRAKMNQQRSRR
Sbjct: 61 HPCSHPEDRPAPSDEEEMMVEVFKYTERVVNMVRPRKLLMIAVADGVAPRAKMNQQRSRR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGS-------------HFDSNCITPGT 165
FRA+++ EK + ++ + L +KEKGS FDSN ITPGT
Sbjct: 121 FRAAQDAKEKEEDKQQLLKML---------QKEKGSTAKEEPIETVVKKAFDSNSITPGT 171
Query: 166 PFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN 225
PFM L+A L Y+ +LN DP W +KVI+SDA VPGEGEHKIM+++R QR P+HDPN
Sbjct: 172 PFMDILAASLRYWCAYKLNTDPAWAKMKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPN 231
Query: 226 TQHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAE 283
T+H + G DADLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GH+ + C G E
Sbjct: 232 TRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKARMCKLCGQKGHDERNCRGEAKE 291
Query: 284 PNPESVITFGSE--VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGN 341
E +E FI++ +S+LREYL EL +PNLPF + ERA+DDWVFMCFFVGN
Sbjct: 292 KAGEFDEKDKAEPLKPFIWLHVSILREYLAIELNIPNLPFRWDLERAIDDWVFMCFFVGN 351
Query: 342 DFLPHLPSLEIREGAVDRLVNLYKKTV 368
DFLPHLP+LEIRE ++ L+ ++K +
Sbjct: 352 DFLPHLPALEIRENGIETLMAIWKDNL 378
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+S EE D VRLWE+G+ DRYYE KF V DIAFR V YV GL WVL YY+QGC
Sbjct: 560 TSSEEGPIDTVRLWEEGYADRYYEQKFKVDAKDIAFRHKVARAYVEGLAWVLMYYFQGCP 619
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+W++P+HYAPFA+DF+++ ++ +FE G
Sbjct: 620 SWEWFYPYHYAPFAADFVDLGKMKISFEKG 649
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+DFYPEDF+IDLNGKK +WQG+ALLPF++ RL A+ LS E+
Sbjct: 681 EDSPILDFYPEDFEIDLNGKKMSWQGIALLPFIEMPRLLDAMKTKSHLLSAED 733
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T G V L+R Q I+ L ED IF++R++TE + K +K +Q +
Sbjct: 383 GYVTKDGHVDLDRAQYILSGLAKQEDSIFRRRKETEDRREAGFKRRKLNNQQGNNRGGAH 442
Query: 651 KAPSFIPGGQ 660
+P GG+
Sbjct: 443 DSPLSGRGGR 452
>gi|443899706|dbj|GAC77035.1| multidrug resistance-associated protein [Pseudozyma antarctica
T-34]
Length = 1165
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 217/382 (56%), Positives = 274/382 (71%), Gaps = 16/382 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ E++ + G +P D+S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEENKTAPGPDGTTITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVSMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEK----IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
SRRFRA+KE EK A +A R K LA P E +K +DSN ITPGTPFM L
Sbjct: 121 SRRFRAAKEAREKHEETQAALAEWRAKGLAVTEDAPKESKKA--WDSNAITPGTPFMDLL 178
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
+A L Y++ ++N DPGWK I+VI+SDA+VPGEGEHKIM++IR+QR+ P+HDPNT+H +
Sbjct: 179 AASLRYWVAHKINTDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIY 238
Query: 232 GADADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGL---DAEPNP 286
G DADLIML LATHEP F ++RE+ N+ + C++CGQ GH C G + +
Sbjct: 239 GLDADLIMLSLATHEPYFKVLREDVFASDNKPKTCNLCGQPGHFAASCTGAARKKSGEHD 298
Query: 287 ESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
E T + FIF+ ++ LREYLE EL MPNLPF + ERA+DDWVF+ FFVGNDFLPH
Sbjct: 299 EKAQTPPEKKPFIFLDVATLREYLEVELNMPNLPFAFDLERAIDDWVFLIFFVGNDFLPH 358
Query: 347 LPSLEIREGAVDRLVNLYKKTV 368
LPSLEIR+GA+D L+ ++KK +
Sbjct: 359 LPSLEIRDGAIDTLLKIWKKEL 380
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D V++WE G+++RYY KF V D FR V Y+ GL WVL YYYQG SW+WY+PF
Sbjct: 654 DTVKMWEPGYRERYYREKFGVDLSDTDFRRQVVKSYIEGLSWVLAYYYQGVPSWQWYYPF 713
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
H++PFA+DF ++ +D FE G
Sbjct: 714 HFSPFAADFEDLESLDIKFELGA 736
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 647 AQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
++++ P+F P DS IIDFYP +F+ID+NGKK AWQGVALLPF+DE+RL AL+
Sbjct: 752 SRASIPPAFHP--LMTESDSDIIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALS 809
Query: 707 PYYEKLSVEE 716
Y L+ +E
Sbjct: 810 DKYPLLTDDE 819
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRML-TYPGFLTDSGDVKL 601
D+ LI V +L L I + T+ K++ + L G+LT+ G V+L
Sbjct: 342 DDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLL------KIWKKELPAMGGYLTNHGKVEL 395
Query: 602 ERVQLIMQDLGMMEDEIFKKRQQTETMF----KMRNKMKKRRERQM 643
R QLI+ L EDEIF++R++ E K R M+KRRE+++
Sbjct: 396 ARAQLILNGLASQEDEIFRRRKEEEDRRENNKKRREDMQKRREKEL 441
>gi|346319605|gb|EGX89206.1| 5'-3' exoribonuclease Dhp1 [Cordyceps militaris CM01]
Length = 970
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/383 (54%), Positives = 275/383 (71%), Gaps = 21/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G IP D ++ NPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDRPVVMEDGTAIPVDITRANPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HP+DKPAP+DE+EMM+ IF+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPDDKPAPEDEEEMMLEIFKYTDRVLNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMARLSACL 175
R+++E +K + + + L +G L E + FD+N ITPGTPFM L++ L
Sbjct: 121 RSAQEAKDKENDKQELIKLLKQQNGGNLATESTEAIAKKAFDNNSITPGTPFMDILASSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DPGW +KVI+SDA VPGEGEHKIM+++R QRA PD+DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPGWAKLKVIISDATVPGEGEHKIMNFVRSQRASPDYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVG--------LDAEPN 285
DLIMLGLATHEP+F ++RE+ F+ ++AR C +CGQ GH+ + C G +D +
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDSKARTCKLCGQRGHDAQNCKGETKGKSGEVDEKDK 300
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
P VI FI++ +SVLREYL ELA+P LPF + ER +DDW+FMC FVGNDFLP
Sbjct: 301 P--VIL----KPFIWLHVSVLREYLAAELAIPELPFRFDLERVIDDWIFMCCFVGNDFLP 354
Query: 346 HLPSLEIREGAVDRLVNLYKKTV 368
HLP+LEIRE +D L ++K+ +
Sbjct: 355 HLPALEIREHGIDTLTTIWKQNL 377
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 62/86 (72%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
E D VRLWEDG+ DRYY+ KF DIAFR V H YV GL WVL+YY+QGC SW+W
Sbjct: 557 EAPADPVRLWEDGYADRYYQLKFHRDPGDIAFRKHVAHAYVEGLAWVLQYYFQGCPSWEW 616
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFA+DF +I+ + FE G
Sbjct: 617 YYPYHYAPFAADFKDISGANVAFEKG 642
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 45/55 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+DS IIDFYPE+F++DLNGKK AWQGVALLPF++ +RL +A+ Y LS E+S+
Sbjct: 674 RDSDIIDFYPEEFEVDLNGKKMAWQGVALLPFIEMDRLLEAVQRRYPLLSDEDSK 728
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Query: 541 VSDNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVK 600
V D+ + V +L L I + T+T K + + G++T G +
Sbjct: 337 VIDDWIFMCCFVGNDFLPHLPALEIREHGIDTLTTIWKQN-----LPALGGYITKDGHID 391
Query: 601 LERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
LER Q I+ L ED IFKKR++ E R KRR Q A+
Sbjct: 392 LERAQCILDGLAGQEDMIFKKRKEQE---DRREANTKRRRLQNNGAS 435
>gi|322692778|gb|EFY84668.1| 5'-3' exoribonuclease 2 [Metarhizium acridum CQMa 102]
Length = 929
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/377 (54%), Positives = 269/377 (71%), Gaps = 9/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G +P D++ NPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEDQPVVMPDGSTVPVDTTSRNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDKPAP+DE+ MM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCAHPEDKPAPEDEEAMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMARLSACL 175
R++++ EK + + + +G +LPP E FD+N ITPGTPFM L+ L
Sbjct: 121 RSAQDAKEKEENKEELLKLVKQQNGGVLPPDHIESVAKKIFDNNSITPGTPFMDILAVSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +KV++SDA VPGEGEHKIM +IR QRA P++DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPAWAKMKVLISDATVPGEGEHKIMSFIRSQRASPEYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIMLGLATHEP+F ++RE+ F+ +AR C +CGQ GHE + C G E + G
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQEGKARTCQLCGQKGHEARNCRGEAKEKAGDIDDKPG 300
Query: 294 SEV--EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ FI++ +SVLREYL ELA+P LPF + ERA+DDWVFMC FVGNDFLPHLP+LE
Sbjct: 301 NATLKPFIWLHVSVLREYLAAELAVPALPFRFDLERAIDDWVFMCCFVGNDFLPHLPALE 360
Query: 352 IREGAVDRLVNLYKKTV 368
IRE +D L +++ +
Sbjct: 361 IREHGIDTLTTIWRNNL 377
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 63/86 (73%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
E+ D VRLWEDG+ DRYY+ KF DDI+FR V YV GL WVL YY+QGC SW+W
Sbjct: 558 EDPIDTVRLWEDGYADRYYQQKFHRSPDDISFRHKVARAYVEGLAWVLLYYFQGCPSWEW 617
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFA+DF ++A +D FE G
Sbjct: 618 YYPYHYAPFAADFKDLANMDIAFEKG 643
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF++DLNGKK AWQGVALLPF+D RL A+ Y LS E+
Sbjct: 675 EDSEIIDFYPEDFEVDLNGKKMAWQGVALLPFIDMPRLLAAVQNKYPLLSSAEA 728
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ + V +L L I + T+T + + + T G++T G + LE
Sbjct: 339 DDWVFMCCFVGNDFLPHLPALEIREHGIDTLTTIWR-----NNLPTMGGYVTKDGHIDLE 393
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
R Q I+ L ED IFK+R++ E R KRR+ Q
Sbjct: 394 RAQRILDGLAKQEDAIFKRRKEQE---DRREANAKRRKLQ 430
>gi|340520299|gb|EGR50535.1| exoribonuclease [Trichoderma reesei QM6a]
Length = 1029
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/380 (53%), Positives = 266/380 (70%), Gaps = 12/380 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E+ P + G IP D+++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEETPITTDDGVTIPVDTTRPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAP DE+EMM+ +F DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPPEKEKG---SHFDSNCITPGTPFMARLSACL 175
R+++E EK + + E L +G + + FDSN ITPGTPFM L+ L
Sbjct: 121 RSAREAKEKEEDKQALIELLKRQNGGVFEAADSEAVVKKAFDSNSITPGTPFMDILAVSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM +IR QRA P++DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMSFIRSQRASPNYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLD-----AEPNPES 288
DLIMLGLATHEP+F ++RE+ F + R C +CGQ GHE C G AE + ++
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFNEGKNRACKLCGQKGHEANNCRGTAKPNDMAEGDEQA 300
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
FI++ +SVLREYL EL++P+LPF + ERA+DDW+FMC FVGNDFLPHLP
Sbjct: 301 KAVQAPLKPFIWLHVSVLREYLAIELSVPDLPFRFDLERAIDDWIFMCCFVGNDFLPHLP 360
Query: 349 SLEIREGAVDRLVNLYKKTV 368
+LEIRE +D L +++ ++
Sbjct: 361 ALEIREHGIDTLTTIWRNSL 380
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+ +E E D VRLWEDG++DRYY+ KF DI FR V H YV GL WVL YY+QGC
Sbjct: 582 APQEAEPVDNVRLWEDGYEDRYYQQKFGKDPQDIEFRHKVAHAYVEGLAWVLLYYFQGCP 641
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+WY+P+HYAPFA+DF ++A+++ +FE G
Sbjct: 642 SWEWYYPYHYAPFAADFKDLAKMEISFEKG 671
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS IIDFYPE+F+IDLNGKK AWQGVALLPF+D +RL KA+ Y LS ++
Sbjct: 703 KDSEIIDFYPEEFEIDLNGKKMAWQGVALLPFIDMKRLLKAVQSKYPLLSPDD 755
>gi|308805434|ref|XP_003080029.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
gi|116058488|emb|CAL53677.1| putative 5-3 exoribonuclease (ISS) [Ostreococcus tauri]
Length = 1057
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/368 (58%), Positives = 264/368 (71%), Gaps = 18/368 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWLS+KYP ++ VED+P + G+ + D+S+ NPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLSQKYPKIVEDVVEDEPMDELGRAVALDASRANPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP E E+ IF+ IDRLF ++RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEGEVFENIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++E EK E ++REKL +G + P+ E G FDSN ITPGTPFM RLS L YY+H
Sbjct: 121 AAQEAKEKAMEEEKLREKLTREGVKVQPKVESGV-FDSNVITPGTPFMGRLSEALKYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DRLNNDPGW+GI+VI SDA+VPGEGEHK M YIR+QR P +PNT+H + G DADLIML
Sbjct: 180 DRLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
GLATHEP+F I+RE F+ G E K+ V + +P +
Sbjct: 240 GLATHEPHFWILRELVFQKKDTNAPQTLGMGTEETKKKVAIARKP-------------YQ 286
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSF--ERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ +SVLREYL EL P P P+ ER DD++FMCFFVGNDFLPH P+LEIREGA+
Sbjct: 287 LLSVSVLREYLALEL-RPVAPTPFKLDPERLFDDFIFMCFFVGNDFLPHSPTLEIREGAI 345
Query: 358 DRLVNLYK 365
D L+ LY+
Sbjct: 346 DLLMTLYR 353
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 5/90 (5%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVP---KDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
E ES D +RL E G+KDRYYE+K ++ IA ++V EYV GL WV +YY++GC
Sbjct: 626 EGESPDTIRLGESGWKDRYYEAKMKATPQTREQIARGMVV--EYVRGLIWVCRYYFEGCC 683
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++P+HYAPFASD N+A + T+FE G
Sbjct: 684 SWGWFYPYHYAPFASDLTNLAGISTDFELG 713
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 33/38 (86%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+DSPIIDFYPEDF +D+NGK+F WQ VALLP++D RL
Sbjct: 745 KDSPIIDFYPEDFDLDMNGKRFTWQAVALLPWIDSRRL 782
>gi|71024163|ref|XP_762311.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
gi|74698979|sp|Q4P149.3|XRN2_USTMA RecName: Full=5'-3' exoribonuclease 2
gi|46101835|gb|EAK87068.1| hypothetical protein UM06164.1 [Ustilago maydis 521]
Length = 1233
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/379 (55%), Positives = 270/379 (71%), Gaps = 11/379 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ E+ P+ G +P D+S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPKTAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
SRRFRA+KE EK E + A G EK+ +DSN ITPGTPFM L+A
Sbjct: 121 SRRFRAAKEAREKHEEEQAALAEWKAKGLGATDDEKKSKRAWDSNAITPGTPFMDLLAAS 180
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N+DPGWK I+VI+SDA+VPGEGEHKIM++IR+QR+ P+HDPNT+H + G D
Sbjct: 181 LRYWVAQKINSDPGWKDIQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGL---DAEPNPESV 289
ADLIML LATHEP F ++RE+ N+ + C++CGQ GH C G + + E
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGQHDEIA 300
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
T + FIF+ ++ LREYLE EL +P LPF + ERA+DDWVF+ FFVGNDFLPHLPS
Sbjct: 301 PTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIR+GA+D L+ ++KK +
Sbjct: 361 LEIRDGAIDTLLRIWKKEL 379
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D V++WE G+++RYY+ KF V D FR V Y+ GLCWVL YYYQG SW+WY+PF
Sbjct: 661 DTVKMWEPGYRERYYKEKFGVDLSDTDFRRSVVKSYIEGLCWVLAYYYQGVPSWQWYYPF 720
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
H++PFA+DF ++ +D F+ G+
Sbjct: 721 HFSPFAADFEDLESLDIQFQLGS 743
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 647 AQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
++++ P+F P DS IIDFYP +F+ID+NGKK AWQGVALLPF+DE+RL AL
Sbjct: 759 SRASIPPAFHP--LMTESDSDIIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALK 816
Query: 707 PYYEKLSVEE 716
Y LS +E
Sbjct: 817 ERYPLLSEDE 826
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRML-TYPGFLTDSGDVKL 601
D+ LI V +L L I + T+ +++ + L G+LT+ G V+L
Sbjct: 341 DDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLL------RIWKKELPAMGGYLTNHGRVEL 394
Query: 602 ERVQLIMQDLGMMEDEIFK----KRQQTETMFKMRNKMKKRRERQM 643
R QLI+ L EDEIF+ + ET K R +M++RR++++
Sbjct: 395 GRAQLILSGLASEEDEIFRRRKEDEDRRETNRKRREEMQQRRDKEL 440
>gi|395330505|gb|EJF62888.1| 5'-3' exoribonuclease 2 [Dichomitus squalens LYAD-421 SS1]
Length = 1182
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/374 (56%), Positives = 275/374 (73%), Gaps = 15/374 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP-----QEVNGQKIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP +I+ +E + E N +P + + PNPNG+EFD+LYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIILPVIEAEQATIPDTEGNEVAVPVNIADPNPNGVEFDSLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMM+ IF +R+ +VRPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMIEIFSYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
SRRFR+++E EK E AR + A G L E++ +DSN ITPGTPFM L++
Sbjct: 121 SRRFRSAQEAKEK--EEARKESIAMWEAMGKTLSEEEKNKKAWDSNAITPGTPFMDLLAS 178
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y++ ++N DPGWK ++VI+SDA+VPGEGEHKIMD+IR+QR+ P HDPNT H + G
Sbjct: 179 SLRYWVVYKMNTDPGWKDVQVIISDASVPGEGEHKIMDFIRRQRSNPGHDPNTHHVIYGL 238
Query: 234 DADLIMLGLATHEPNFTIIREE-FKPNQAR-PCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIML LATHEP+F ++RE+ F +R C +CGQ GH +C G AE T
Sbjct: 239 DADLIMLSLATHEPHFRVLREDVFHQEGSRTACRICGQEGHYAAQCTGTKAEIK----KT 294
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ FIF+ +++LREYLE EL +PN+PFP++FE+A+DDWV + FFVGNDFLPHLPSLE
Sbjct: 295 PPEKKPFIFLDVAILREYLEAELNVPNVPFPFNFEQAIDDWVLLIFFVGNDFLPHLPSLE 354
Query: 352 IREGAVDRLVNLYK 365
IREGA+D L+ +++
Sbjct: 355 IREGAIDTLLKIWR 368
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 30/131 (22%)
Query: 387 GVKRSFDDV----------------DESSEEEESN--------------DEVRLWEDGFK 416
GVKRS D+V D++ E E++ D+V+LWE G++
Sbjct: 630 GVKRSIDEVEAEDAEDPEDLGPSDDDDAPAEAETSYVLKVNPDGTVDQEDQVKLWEPGYR 689
Query: 417 DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
+RYY KF D FR V Y+ G+ WVL+YYYQG SW WY+PFH+APFA+DF +
Sbjct: 690 ERYYSQKFGAEYSDKEFRKQVTKSYIEGMAWVLQYYYQGTPSWHWYYPFHFAPFAADFED 749
Query: 477 IAEVDTNFETG 487
+ ++D +F G
Sbjct: 750 LDKMDIDFTLG 760
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 41/51 (80%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP F+ID+NGK+ AWQGVALLPF+DE+RL A+ P Y LS +E
Sbjct: 794 SPIIDFYPSTFQIDMNGKRMAWQGVALLPFIDEKRLLDAMGPRYPNLSDDE 844
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ LLI V +L L I + T+ + RM G++T+ G ++L
Sbjct: 333 DDWVLLIFFVGNDFLPHLPSLEIREGAIDTLLKIWRTE--LPRMG---GYITNHGQLELS 387
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSF-IPGGQF 661
R Q+I++ L EDEIF++R++ E K +K + A + +PS +
Sbjct: 388 RAQIILEGLARREDEIFRRRREAEERQDQNAKRRKIEKETGSNGASAGPSPSLNLTVAPV 447
Query: 662 APQD-SPIIDFYPEDFKIDLNGKKFA 686
AP P DF + I L G K A
Sbjct: 448 APGSLPPRPDFAAKADSIGLGGPKNA 473
>gi|440466364|gb|ELQ35636.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae Y34]
gi|440487857|gb|ELQ67622.1| 5'-3' exoribonuclease 2 [Magnaporthe oryzae P131]
Length = 1041
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/404 (51%), Positives = 273/404 (67%), Gaps = 42/404 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +EDKP E+ +G IP D +KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDKPVEMEDGTSIPVDITKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI----------------- 102
HPC HPED+PAP+DE+EMM+ IF+ DR+F +VRPRK+L +A+
Sbjct: 61 HPCAHPEDRPAPQDEEEMMLEIFKYTDRVFNMVRPRKVLMIAVGKDSKHYPKCELYINPI 120
Query: 103 ----DGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLL----ADGCILPPEKEKGS 154
DGVAPRAKMNQQRSRRFR+++E EK + + + L D E
Sbjct: 121 QPLLDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKLELLKLLKQQKGGDVSAETLESVTKK 180
Query: 155 HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIR 214
FD+N ITPGTPFM L+ L Y+ +LN DPGW +K+I+SDA VPGEGEHKIMD++R
Sbjct: 181 AFDTNSITPGTPFMDILAGSLRYWCAYKLNTDPGWANVKIIISDATVPGEGEHKIMDFVR 240
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGH 272
QR+ PDHDPNT+H + G DADLIMLGLATHEP+F ++RE+ F+ + R C +CGQ GH
Sbjct: 241 SQRSSPDHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFQQGKPRLCKLCGQKGH 300
Query: 273 EMKECVG--------LDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYS 324
+ ++C G D + N E + FI++ +++LREYL EL +P+LPF +
Sbjct: 301 DAQQCKGEVKKKEGEFDEKQNAEPLKP------FIWLHVAILREYLNVELYVPDLPFRFD 354
Query: 325 FERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
ERA+DDW+F+C FVGNDFLPHLP+LEIRE + L +++K+ +
Sbjct: 355 LERAVDDWIFLCCFVGNDFLPHLPALEIRENGIITLTSIWKQNL 398
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+S E+ D VRLWEDG+ DRYYE KF V ++ FR V H YV GL WVL YY+QGC
Sbjct: 561 ASGNGEAVDTVRLWEDGYTDRYYEQKFHVDPKNVEFRHKVAHAYVEGLSWVLLYYFQGCP 620
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+W++P+HYAPFA DF+ + +++ +FE G
Sbjct: 621 SWEWFYPYHYAPFAQDFVGLKDLEISFEKG 650
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF++DLNGKKFAWQGVALLPF++ +RL A+ Y +LS +E+
Sbjct: 682 EDSEIIDFYPEDFEVDLNGKKFAWQGVALLPFIEMDRLLAAVQAKYPELSADEA 735
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T G + LERVQ IM L ED IF+KR++ E K +K ++ + K S
Sbjct: 403 GYVTKDGHIDLERVQYIMDGLAKQEDSIFRKRKEQEDRRDANAKRRKMQDDRAKWGNNSA 462
Query: 651 KAP 653
P
Sbjct: 463 NGP 465
>gi|326471133|gb|EGD95142.1| 5'-3' exoribonuclease [Trichophyton tonsurans CBS 112818]
Length = 1066
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/407 (51%), Positives = 278/407 (68%), Gaps = 39/407 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ VE++PQE++GQ+IP D +KPNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSSKYPKIVSAVVEEQPQEIDGQEIPVDITKPNPNGEEMDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI------------------ 102
PCTHPE KP P +E EMM+ IF+ DR+ +VRPRK+L +A+
Sbjct: 61 PCTHPEGKPPPANEGEMMLEIFKYTDRVVNMVRPRKVLMIAVVAKGSYSLSFSFPTGTYS 120
Query: 103 -------------DGVAPRAKMNQQRSRRFRASKETA---EKIAEVARI-REKLLADGCI 145
DGVAPRAKMNQQRSRRFR++++ EK E A++ +++ +
Sbjct: 121 FCDMFGTNVGFFLDGVAPRAKMNQQRSRRFRSAQDAKAEDEKKVEFAKLLKKQKRGKKDV 180
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
E+ +D+N ITPGTPFM L+ L Y++ +L+ DPGW+ +KVI+SDA VPGEG
Sbjct: 181 TVAEEVITKTWDTNVITPGTPFMDILALALRYWVAYKLSTDPGWEKLKVIISDATVPGEG 240
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQARP 263
EHKIM++IR QRA P++DPNT+H + G DADLIMLGL THEP+F ++RE+ F+ ++AR
Sbjct: 241 EHKIMEFIRSQRACPEYDPNTRHVIYGLDADLIMLGLGTHEPHFRVLREDVFFQESKART 300
Query: 264 CDVCGQMGHEMKECVGLDAEPNPE-SVITFGSEVE-FIFVRLSVLREYLEKELAMPNLPF 321
C +CGQ GH + C G E E G+ ++ FI++ +SVLREYL E+ +P PF
Sbjct: 301 CKLCGQAGHVEEACTGKAKEKRGEFDEKQKGNPLKPFIWLHVSVLREYLAVEMQVPQQPF 360
Query: 322 PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
P++ ERALDDWVFMCFFVGNDFLPHLPSLEIRE +D L+ +++ +
Sbjct: 361 PFNLERALDDWVFMCFFVGNDFLPHLPSLEIRENGIDTLIAIWRDNI 407
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 64/89 (71%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
E+E D VRLWEDG+ DRYYE KF V DIAFR V YV GL WVL YY+QGC SW
Sbjct: 599 EDEMPPDTVRLWEDGYADRYYEQKFGVSPKDIAFRHKVARAYVEGLSWVLLYYFQGCPSW 658
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
WY+P+HYAPFA+DF++I E+D F GT
Sbjct: 659 TWYYPYHYAPFAADFVDIGEMDVQFTKGT 687
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPEDF +DLNGKKFAWQGVALLPF+DE+RL A+ Y LS EE
Sbjct: 718 ENSEIIDFYPEDFPVDLNGKKFAWQGVALLPFIDEKRLLAAMDKRYHLLSEEE 770
>gi|403163709|ref|XP_003323763.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164418|gb|EFP79344.2| hypothetical protein PGTG_05665 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1203
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 268/378 (70%), Gaps = 11/378 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE--VNG--QKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVPA FRWLS+KYP V+ +ED P + V+G +++P D S+ NPNGMEFDNLYLDMN
Sbjct: 1 MGVPALFRWLSKKYPKVVEQVIEDVPAQNAVDGGTEEVPIDMSQRNPNGMEFDNLYLDMN 60
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI+HPCTHPE K P+ E EMM+ +F+ +R+ +VRPRKLL +AIDGVAPRAKMNQQRS
Sbjct: 61 GIVHPCTHPEGKKPPETEAEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 120
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPE-KEKGSHFDSNCITPGTPFMARLSACL 175
RRFRA++E K E + E+ G LP + K +DSN ITPGTPFM L+ L
Sbjct: 121 RRFRAAQEAKVKEEEKQALIEEYKQQGKELPEDYKTDKKAWDSNAITPGTPFMTLLTESL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I ++N D GW I+VILSDA+VPGEGEHKIMD++R+QR QP +DPNT+H + G DA
Sbjct: 181 RYWIVYKMNTDKGWSQIQVILSDASVPGEGEHKIMDFVRRQRTQPSYDPNTKHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQ--ARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIML LATHEP+F ++RE+ +Q + C CGQ+GH +C G E E T
Sbjct: 241 DLIMLSLATHEPHFKVLREDVFADQKKGKGCYTCGQLGHHSSQCQGKPKEKVDEH-DTKQ 299
Query: 294 SEVE---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
VE FIF+ + +LREYL EL + LPFP+ ERA+DDWV + FFVGNDFLPHLPSL
Sbjct: 300 KPVERKPFIFLDVGILREYLAIELNIGGLPFPFDIERAIDDWVLLIFFVGNDFLPHLPSL 359
Query: 351 EIREGAVDRLVNLYKKTV 368
EIREGA+D L+ ++K +
Sbjct: 360 EIREGAIDTLLKIWKTNL 377
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
E +D V+LWE G+++RY+ KF + D++ R +V H YV GL WVL YYYQGC+SW+W
Sbjct: 691 EQDDTVKLWEPGYRERYFRQKFGIELNDEVEKRKIVKH-YVEGLAWVLAYYYQGCQSWQW 749
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
++P+HY+PFASDF N+ E + F G
Sbjct: 750 FYPYHYSPFASDFTNLEEFEIKFNLG 775
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYPE+F+ID+NGKK WQGVALLPF++++RL ++ ++L+ E+
Sbjct: 808 DSPIKDFYPEEFEIDMNGKKMLWQGVALLPFIEQDRLLNSMKDCEDRLAPED 859
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ LLI V +L L I + T+ K + RM GFLTD G + L+
Sbjct: 339 DDWVLLIFFVGNDFLPHLPSLEIREGAIDTLLKIWKTN--LGRMG---GFLTDCGALNLK 393
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE-----RQMKMAAQSTKAP 653
R ++I++ L EDEIF++ + +++ KRR+ +Q+ + + +T P
Sbjct: 394 RTEIILEGLASREDEIFRR---RREAEERQDQSAKRRKIDDDNKQVHIKSSTTNQP 446
>gi|171690192|ref|XP_001910021.1| hypothetical protein [Podospora anserina S mat+]
gi|170945044|emb|CAP71155.1| unnamed protein product [Podospora anserina S mat+]
Length = 1078
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/398 (54%), Positives = 270/398 (67%), Gaps = 34/398 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED P ++ G IP D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDTPITMDDGAVIPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI----------------- 102
HPC+HPED+PAPKDE+EMMV IF+ DR+ +VRPRKLL +A+
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEIFKYTDRVVNMVRPRKLLMIAVGMSNPSLDYQRQKLTRS 120
Query: 103 DGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLAD----GCILPPEKEKGSHFDS 158
DGVAPRAKMNQQRSRRFRA+++ EK + ++ + L D + P E+ FDS
Sbjct: 121 DGVAPRAKMNQQRSRRFRAARDAKEKEEDKEKLLKMLQKDKKSTVQVQPVEEVVQKAFDS 180
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N ITPGTPFM L+A L Y+ +LN DP W IKVI+SDA +PGEGEHKIM+Y+R QR
Sbjct: 181 NSITPGTPFMDILAASLRYWCSYKLNTDPAWAKIKVIISDATIPGEGEHKIMEYVRSQRN 240
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKE 276
P HDPNT+H + G DADLIMLGLATHEP+F ++RE+ ARP C +CGQ GH+
Sbjct: 241 SPGHDPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFAQDARPRLCKLCGQKGHDAAN 300
Query: 277 CVGLDAEPNPESVITFGSEVE------FIFVRLSVLREYLEKELAMPNLPFPYSFERALD 330
C G E E FG + FI++ +++ REYL EL +P LPF + ERA+D
Sbjct: 301 CRGEAKEKEGE----FGEKDRAAPLKPFIWLHVNIFREYLAVELNVPGLPFAFDLERAID 356
Query: 331 DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
DWVFMCFFVGNDFLPHLP+LEIRE +D LV ++K +
Sbjct: 357 DWVFMCFFVGNDFLPHLPALEIRENGIDTLVAIWKDNL 394
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 67/90 (74%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+S EEE+ D VRLWE+G+ DRYYE KF V DI FR V YV GL WVL YY+QGC
Sbjct: 588 ASGEEEAVDTVRLWEEGYADRYYEQKFKVDPKDIEFRHKVARAYVEGLAWVLMYYFQGCP 647
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW+W++P+HYAPFA+DF+++ ++ NF+ G
Sbjct: 648 SWEWFYPYHYAPFAADFVDLGKMTINFDKG 677
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS IIDFYPE+F IDLNGKK +WQG+ALLPF++ RL KA+ P + LS E+
Sbjct: 709 EDSEIIDFYPEEFDIDLNGKKMSWQGIALLPFIEMPRLLKAMEPKQKLLSEED 761
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT G V LER QLIM L ED IF++R++TE + K+R+ +Q K ++
Sbjct: 399 GYLTKDGHVDLERAQLIMAGLAKQEDAIFRRRKETED--RREAGFKRRKLQQEKQQQRNG 456
Query: 651 K----APSFIPGGQFAPQ 664
+ +PS+ GQ P+
Sbjct: 457 QGQQDSPSYRKRGQPPPE 474
>gi|298204908|emb|CBI34215.3| unnamed protein product [Vitis vinifera]
Length = 1083
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/367 (59%), Positives = 272/367 (74%), Gaps = 10/367 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +YP ++ VE++P E G +I D S+PNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYPLAVMDVVEEEPSE-GGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+ KPAP D++ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCFHPDGKPAPTTYDDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ AE AE R+R++ +G +L P KEK DSN ITPGT FMA LS L YYIH
Sbjct: 118 AAKDAAEAEAEEERLRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVALQYYIH 176
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN +PGW KVILSD+NVPGEGEHKIM YIR QR +PNT+HCL G DADLIML
Sbjct: 177 SRLNRNPGWCSTKVILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYGLDADLIML 236
Query: 241 GLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LATHE +F+I+RE P Q C +CGQ+GH EC G++ + T + ++
Sbjct: 237 SLATHEVHFSILREMITPPGQQEKCYLCGQVGHLAAECRGIEVVDD-----TPIHKKKYQ 291
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
F+ + VLREYL+ +L + N PF +FER LDD+VF+CFFVGNDFLPH+P+LEIREGA++
Sbjct: 292 FLNIWVLREYLQYDLEILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINL 351
Query: 360 LVNLYKK 366
L+++Y++
Sbjct: 352 LMHVYRR 358
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVLKYY 452
++E + E + +V+L E G+K+RYY KF++ P++ R + +YV GLCWV +YY
Sbjct: 658 LEEEAASHEYSFQVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKYVEGLCWVCRYY 717
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YQG SW+WY+PFHYAPFASD ++ +++ F G
Sbjct: 718 YQGVCSWQWYYPFHYAPFASDLKDLVDLEITFFLG 752
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
Q SPI+DFYP DF+ID+NGK++AWQGVA LPF+DEE+L L+VEE
Sbjct: 784 QSSPILDFYPSDFEIDMNGKRYAWQGVAKLPFIDEEKLLAETKKLEVTLTVEE 836
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTD+G+V L+RV+ ++ + + ED+IF+KR + + F ++ + + +
Sbjct: 365 GYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQRFNLQAQPSGASSLAHRKPIEGA 424
Query: 651 KAP 653
K P
Sbjct: 425 KKP 427
>gi|358055903|dbj|GAA98248.1| hypothetical protein E5Q_04931 [Mixia osmundae IAM 14324]
Length = 1271
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/401 (53%), Positives = 268/401 (66%), Gaps = 36/401 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE----------VNGQ----------------KI 34
MGVPA FRWLS+KYP ++ ED P + V GQ +I
Sbjct: 1 MGVPALFRWLSKKYPHIVTSVKEDLPTKAQPGASRLDPVTGQPLPGSEDDPDGGGEDVEI 60
Query: 35 PFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 94
P D S PNPNG EFD LYLDMNGI+HPCTHPE KP P+ E +MMV IF +R+ ++RP
Sbjct: 61 PVDMSLPNPNGEEFDCLYLDMNGIVHPCTHPEGKPPPETEADMMVEIFAYTERVVNMIRP 120
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEV-ARIREKLLADGCILPPEKEKG 153
RKLL +AIDGVAPRAKMNQQRSRRFRAS+E K E A IRE A G + E +
Sbjct: 121 RKLLLIAIDGVAPRAKMNQQRSRRFRASQEAKTKAEEKEAAIRE-WEAMGKEVSDEYKDK 179
Query: 154 SHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYI 213
+D N ITPGTPFM L+A L Y++ +LN+DPGW ++V++SDA+VPGEGEHKIMDYI
Sbjct: 180 KAWDQNAITPGTPFMDLLAASLRYWVASKLNSDPGWSKLQVVISDASVPGEGEHKIMDYI 239
Query: 214 RKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMG 271
R+QR+ +DPNT+H + G DADLIML LATHEP F ++RE+ + + R C CGQ G
Sbjct: 240 RRQRSHAGYDPNTRHVIYGLDADLIMLSLATHEPYFKVLREDVFAQDRKPRGCHRCGQPG 299
Query: 272 HEMKECVGLDAEPNPE----SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
H C G E E + IT FIF+ +SVLREYLE EL +P +PFP+ ER
Sbjct: 300 HHSSNCTGAPKEKQGEFDEKNKIT--ERKPFIFLDVSVLREYLEIELNVPGVPFPFDLER 357
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
A+DDWVF+ FFVGNDFLPHLPSLEIREGA+D L+ +++ ++
Sbjct: 358 AIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLAIWRTSL 398
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 64/86 (74%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E +D V+LWE G+K+RYY+ KF VP +D AFR + Y+ GL WVL YYYQGC SW+W+
Sbjct: 716 EQDDTVKLWEPGYKERYYQQKFGVPLEDKAFRDQIVKNYMEGLSWVLAYYYQGCPSWQWF 775
Query: 463 FPFHYAPFASDFINIAEVDTNFETGT 488
+P+H+APFASDF ++ ++D FE G
Sbjct: 776 YPWHFAPFASDFTDLEKLDIQFELGA 801
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYPE+F ID+NGKK WQGVALLPF+D RL AL +Y +LS +E
Sbjct: 832 EDSPIIDFYPEEFMIDMNGKKMLWQGVALLPFIDSSRLLAALDLHYHELSEDE 884
>gi|302309530|ref|NP_986969.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|442570294|sp|Q74ZA0.4|XRN2_ASHGO RecName: Full=5'-3' exoribonuclease 2
gi|299788402|gb|AAS54793.2| AGR303Wp [Ashbya gossypii ATCC 10895]
gi|374110220|gb|AEY99125.1| FAGR303Wp [Ashbya gossypii FDAG1]
Length = 945
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/370 (54%), Positives = 270/370 (72%), Gaps = 13/370 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +ED PQ V+G K+P D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEDTPQVVDGVKLPIDYSAANPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KPAP+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ E AR+ + A G ++ + +D+N ITPGTPFM +L+A L Y+
Sbjct: 120 SARDAKLANEEKARVLAEREAYGEMIDDAVKAKKSWDTNAITPGTPFMDKLAAALRYWTS 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA ++PNT HC+ G DADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADVQYNPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
GLATHEP+F I+RE+ + N+ RP H+M + + AE +++I +E F
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRRP------RQHDM---MDMSAE-EKQALIEQDAEKPF 289
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+++ +SVLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLPSL++RE ++D
Sbjct: 290 LWLHVSVLREYLSAELLVPRLPFHFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSID 349
Query: 359 RLVNLYKKTV 368
LV+++K +
Sbjct: 350 ILVDIWKAVL 359
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+++ VRL+E G+ DRYY++KF VP I A R V YV G+ WVL YYYQGC SW W
Sbjct: 578 DTDTGVRLFEPGYHDRYYQAKFHVPTGSIDALRKKVVRSYVEGISWVLLYYYQGCPSWTW 637
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFASDF I+++ F+ G
Sbjct: 638 YYPYHYAPFASDFTGISDLSVTFDLG 663
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I DFYPE+F ID+NG+K AW+ + LLPF+DE RL A+ Y LS E
Sbjct: 696 ESEIYDFYPEEFPIDMNGEKMAWKALVLLPFIDETRLLAAVRQKYPLLSEAE 747
>gi|297795249|ref|XP_002865509.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
gi|297311344|gb|EFH41768.1| hypothetical protein ARALYDRAFT_917497 [Arabidopsis lyrata subsp.
lyrata]
Length = 1053
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/381 (57%), Positives = 276/381 (72%), Gaps = 7/381 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-KIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVP+F+RWL ++YP +I +E++P EVNG IP D+SKPNPNG E+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLIQRYPLIIQEVIEEEPLEVNGGVTIPIDTSKPNPNGYEYDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RRF
Sbjct: 61 HPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YYI
Sbjct: 121 RAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYYI 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLIM
Sbjct: 180 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV-- 296
L LATHE +F+I+RE F P + C +CGQ+GH +C G E + ++V
Sbjct: 240 LSLATHEIHFSILREVVFFPGEEDKCFLCGQVGHRAADCEGKMKRKAGEMLDDTEADVVV 299
Query: 297 --EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ FV + +LREYLE ++ +PN + +R +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 300 KKPYEFVNIWILREYLEHDMQIPNQRSKKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 359
Query: 355 GAVDRLVNLYKKTVYKTQEQL 375
GA++ L+++YK ++ L
Sbjct: 360 GAIELLMSVYKNKFRSAKKYL 380
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
Query: 360 LVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRY 419
L +L V+ ++L E+ + + R DV S + E+ D+V+L G+++RY
Sbjct: 520 LSHLNCAKVHSGFQELDNGEDLKFKLKKLLRDKSDVFSSGKGEQ--DKVKLGATGWRERY 577
Query: 420 YESKFDVPKDDIA--FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
YE KF + R V +Y GLCW++ YYY G SW W++P+HYAPFASD +
Sbjct: 578 YEEKFTAKSAEEMELIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGL 637
Query: 478 AEVDTNFETGT 488
+D FE G+
Sbjct: 638 DSLDIKFELGS 648
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI DFY DF+ID+NGK+++WQG++ LPFVDE RL +A A + L+ EE
Sbjct: 681 SPIADFYAADFEIDMNGKRYSWQGISKLPFVDERRLLEAAALVEKSLTNEE 731
>gi|343427909|emb|CBQ71434.1| related to dna exoribonuclease Dhp1p [Sporisorium reilianum SRZ2]
Length = 1251
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/379 (55%), Positives = 269/379 (70%), Gaps = 11/379 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ E+ P G +P D+S PNPNG EFD LYLDM
Sbjct: 1 MGVPALFRWLSKKYPRIVSSVQEEDPATAPGPDGTEITLPLDTSTPNPNGEEFDCLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMMV +F +R+ +VRPR+LL MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFAYTERVVNMVRPRRLLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEK-EKGSHFDSNCITPGTPFMARLSAC 174
SRRFRA+KE EK E + A G + + + +DSN ITPGTPFM L+A
Sbjct: 121 SRRFRAAKEAREKHEEKEAALAEWKAKGLPVTDDALQSKKAWDSNAITPGTPFMDLLAAS 180
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N+DPGWK ++VI+SDA+VPGEGEHKIM++IR+QR+ P+HDPNT+H + G D
Sbjct: 181 LRYWVAQKINSDPGWKDVQVIISDASVPGEGEHKIMEHIRRQRSHPEHDPNTKHVIYGLD 240
Query: 235 ADLIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPES---V 289
ADLIML LATHEP F ++RE+ N+ + C++CGQ GH C G + + E
Sbjct: 241 ADLIMLSLATHEPYFKVLREDVFAADNKPKTCNLCGQPGHFAASCTGAAKKKSGEHDEIA 300
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
T + FIF+ ++ LREYLE EL +P LPF + ERA+DDWVF+ FFVGNDFLPHLPS
Sbjct: 301 PTPPEKKPFIFLDVATLREYLEVELNIPQLPFAFDLERAIDDWVFLIFFVGNDFLPHLPS 360
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIR+GA+D L+ ++KK +
Sbjct: 361 LEIRDGAIDTLLRIWKKEL 379
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 58/83 (69%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D V++WE G+++RYY+ KF V D FR V Y+ GLCWVL YYYQG SW+WY+PF
Sbjct: 649 DTVKMWEPGYRERYYKEKFGVDLSDTDFRRQVVKSYIEGLCWVLAYYYQGVPSWQWYYPF 708
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
H++PFA+DF ++ +D FE G
Sbjct: 709 HFSPFAADFEDLESLDIKFELGA 731
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Query: 647 AQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
++++ P+F P DS IIDFYP +F+ID+NGKK AWQGVALLPF+DE+RL AL
Sbjct: 747 SRASIPPAFHP--LMTESDSEIIDFYPSEFEIDMNGKKMAWQGVALLPFIDEKRLLDALN 804
Query: 707 PYYEKLSVEE 716
Y LS +E
Sbjct: 805 EKYPLLSDDE 814
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRMLTYPGFLTDSGDVKLE 602
D+ LI V +L L I + T+ K + G+LT+ G V+L
Sbjct: 341 DDWVFLIFFVGNDFLPHLPSLEIRDGAIDTLLRIWK-----KELPAMGGYLTNHGRVELG 395
Query: 603 RVQLIMQDLGMMEDEIFKKRQQTETMF----KMRNKMKKRRERQM 643
R Q+I+ L ED+IF++R++ E K R +M+KRRER++
Sbjct: 396 RAQIILSGLASEEDDIFRRRKEDEDRRENNKKRREEMQKRREREL 440
>gi|9759012|dbj|BAB09325.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 746
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/381 (57%), Positives = 273/381 (71%), Gaps = 9/381 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVP+F+RWL ++YP I +E++P EVNG IP DSSKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YY
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLI
Sbjct: 180 IHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV-- 296
ML LATHE +F+I+RE F P + C +CGQ GH +C G E + ++V
Sbjct: 240 MLSLATHEIHFSILREVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 299
Query: 297 --EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ FV + +LREYLE ++ +P + +R +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 300 KKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 357
Query: 355 GAVDRLVNLYKKTVYKTQEQL 375
GA++ L+++YK ++ L
Sbjct: 358 GAIELLMSVYKNKFRSAKKYL 378
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 406 DEVRLWEDGFKDRYYESKFDVP--KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D+V+L + G+++RYYE KF ++ R V +Y GLCW++ YYY G SW W++
Sbjct: 524 DKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFY 583
Query: 464 PFHYAPFASDFINIAEVDTNFETGT--QPVN 492
P+HYAPFASD + ++D FE G+ +P N
Sbjct: 584 PYHYAPFASDLKGLEKLDIKFELGSPFKPFN 614
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF+ID+NGK+++WQG++ LPFV+E+RL +A A + L+ EE
Sbjct: 640 DSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 691
>gi|22531090|gb|AAM97049.1| unknown protein [Arabidopsis thaliana]
gi|23197934|gb|AAN15494.1| unknown protein [Arabidopsis thaliana]
Length = 763
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 275/372 (73%), Gaps = 8/372 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP ++ +E++P E+ G KIP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ ++ AE R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN+D GWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
GLATHE +F+I+RE + P Q C +CGQMGH C G + ES G +F+
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEK-GDGNDFV 298
Query: 300 -----FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ + VLREYLE E+ +PN PF ER +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 KKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 355 GAVDRLVNLYKK 366
GA++ L+ +YKK
Sbjct: 359 GAINLLMAVYKK 370
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D + + D+V+L + G+++RYYE KF V P++ R V +Y GLCWV+ YY
Sbjct: 519 DAFNSDTTEEDKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGLCWVMHYYM 578
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT--QPVNN 493
+G SW+W++P+HYAPFASD ++ E+D FE GT +P N
Sbjct: 579 EGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQ 620
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGK+F+WQG+A LPF+DE RL +A++ L+ EE
Sbjct: 645 NSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEE 696
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
++ G+LTD L+RV+ +Q +G ED+IF+KR R K K + +M
Sbjct: 374 SFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATKRMDD 433
Query: 648 QS-TKAPSFIPGGQF-------APQDSP 667
++ T P +P +F AP SP
Sbjct: 434 EAPTVQPDLVPVARFSGSRLASAPTPSP 461
>gi|407922574|gb|EKG15671.1| Zinc finger CCHC-type protein [Macrophomina phaseolina MS6]
Length = 1073
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/390 (52%), Positives = 269/390 (68%), Gaps = 27/390 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPA FRWLS KYP ++ VE +P E +G P D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSTKYPKIVSSVVEAEPVEYPDGTVEPVDTTKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPEDK P++E+EMM+ +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKDPPENEEEMMIEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGS-----------------HFDSNCIT 162
RA+++ +K A+ A + L + + +GS +DSN IT
Sbjct: 121 RAAQDAKQKDADAAEFAKMLASQK-----KNRRGSGSDEDEEESAEAQIVKKTWDSNSIT 175
Query: 163 PGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDH 222
PGTPFM L+ L Y+ +LN DPGW+ +KVI+SDA VPGEGEHKIM+++R QR P H
Sbjct: 176 PGTPFMDILAKSLRYWCAYKLNTDPGWEKLKVIISDATVPGEGEHKIMEFVRSQRRSPFH 235
Query: 223 DPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGL 280
DPNT+H + G DADLIMLGLATHEP+F ++RE+ N A+P C CGQ GH +C G
Sbjct: 236 DPNTRHVIYGLDADLIMLGLATHEPHFRVLREDVFFNDAKPRTCRRCGQTGHYADQCRGE 295
Query: 281 DAEPNPESVITFG--SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFF 338
+ E + ++ FI++ +S+LREYL E+ + N F + ERALDDWVFMCFF
Sbjct: 296 MKKKEDEHDVKQNKVTKKPFIWLHVSILREYLAAEMFVENQGFAFDLERALDDWVFMCFF 355
Query: 339 VGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
VGNDFLPHLPSLEIRE +D L+N++++ +
Sbjct: 356 VGNDFLPHLPSLEIREQGIDTLINIWRENI 385
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKD 429
K + ++ +E+ GR +D + E D+VR+WE+G+ DRYYE KF V
Sbjct: 568 KRKAEILEEDESSTPGRNT--PVEDSPAAKPAEPPQDDVRMWEEGYADRYYEQKFHVDPK 625
Query: 430 DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
DI FR V +Y GL WVL YY+QGC SW WY+P HYAPFA DF+++ +++ FE G
Sbjct: 626 DIEFRHQVARDYAEGLAWVLLYYFQGCPSWTWYYPHHYAPFAQDFVDLGKMELKFEKG 683
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
QDS IIDFYPEDF +DLNGKK AWQGVA+LPF+DE+RL KA+ Y LS EE
Sbjct: 715 QDSDIIDFYPEDFVVDLNGKKMAWQGVAILPFIDEKRLLKAMNTKYPLLSAEE 767
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQ 642
G++T G V + R QLI++ L +ED IFK+R++TE R +KRR++Q
Sbjct: 390 GYVTKDGHVDMNRAQLILEGLAKLEDGIFKRRKETED---RREAAQKRRKQQ 438
>gi|444315189|ref|XP_004178252.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
gi|387511291|emb|CCH58733.1| hypothetical protein TBLA_0A09480 [Tetrapisispora blattae CBS 6284]
Length = 1063
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/368 (54%), Positives = 267/368 (72%), Gaps = 15/368 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I E PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVSEILPQVVDGVTLPIDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KPAP+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPAPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA-EKIAEVARI--REKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ + E A A + REK+ G I+ + +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDASIENQAREAILNEREKI---GEIIDESLKSKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L D GWK ++VI+SDA VPGEGEHKIM+++R QR P+++PNT HC+ G DADL
Sbjct: 177 WISFKLATDLGWKNLQVIISDATVPGEGEHKIMNFVRAQRGDPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I LGLATHEP+F I+RE+ R H++K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNR-------KKHKLKDTMNM-TEEEKQLISKQDSEKP 288
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ LSVLREYL EL +P LPFP+ ERA+DDWVFMCFF GNDFLPHLPSL++RE ++
Sbjct: 289 FLWLHLSVLREYLSAELFVPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSI 348
Query: 358 DRLVNLYK 365
D L++++K
Sbjct: 349 DILLDIWK 356
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+++ +L+E G+K+RYY +KF + D+I A R + Y+ G+ WVL YYYQGC SW+W
Sbjct: 614 DTDKPTKLYEPGYKERYYVNKFHIKSDEIEALRKDMVKSYIEGVAWVLLYYYQGCASWEW 673
Query: 462 YFPFHYAPFASDFINIAEVDTNF 484
++P+HYAP SDF + ++ F
Sbjct: 674 FYPYHYAPLPSDFYGFSNMNVEF 696
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK AW G+ALLPF+D RL K + Y KL+ E
Sbjct: 732 DSEIIDFYPEEFPIDMNGKKMAWHGIALLPFIDATRLLKVVRDQYPKLTDAE 783
>gi|366995071|ref|XP_003677299.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
gi|342303168|emb|CCC70946.1| hypothetical protein NCAS_0G00590 [Naumovozyma castellii CBS 4309]
Length = 1012
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/371 (53%), Positives = 267/371 (71%), Gaps = 21/371 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E+ PQ ++G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQVIDGVTLPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE++P P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ A E E+ R +E++ G ++ + +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAAIENEAREEILRQKEEI---GEVIDEAVKNKKTWDSNAITPGTPFMDKLAASLRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK +++I+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
I LGLATHEP+F I+RE+ N+ R D M E K+ ++ S
Sbjct: 237 IFLGLATHEPHFRILREDVFAQNNNKRRNFDDTLNMSEEEKQL-----------LLAKDS 285
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
E F+++ ++VLREYL EL +P L FP+ ERA+DDWVFMCFF GNDFLPHLPSL++RE
Sbjct: 286 EKPFLWLHINVLREYLGAELFIPRLSFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRE 345
Query: 355 GAVDRLVNLYK 365
++D L++++K
Sbjct: 346 NSIDILLDIWK 356
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E GF++RYY++K V +I R + YV G+ WVL YYYQGC SW W
Sbjct: 589 DTDEAVKLYEPGFRERYYKAKCYVSDAEIEPLRKGMVRSYVEGVSWVLLYYYQGCASWDW 648
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFASDF +I + FE G
Sbjct: 649 YYPYHYAPFASDFFDITNIKVEFELG 674
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP +F ID+NGKK +WQG++LLPF+DE+RL + + Y KL+ E
Sbjct: 707 DSPIIDFYPTEFPIDMNGKKMSWQGISLLPFIDEKRLLETVRDQYPKLTPAE 758
>gi|401623665|gb|EJS41757.1| rat1p [Saccharomyces arboricola H-6]
Length = 1006
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/369 (53%), Positives = 265/369 (71%), Gaps = 17/369 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E EV R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQVENEAREEVMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
I LGLATHEP+F I+RE+ F + + ++ M +E L + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKRNNIKDTMNMTEEEKQFLQKQ---------NSEQ 287
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE +
Sbjct: 288 PFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENS 347
Query: 357 VDRLVNLYK 365
+D L++++K
Sbjct: 348 IDILLDIWK 356
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V DI R + Y+ G+ WVL YYYQGC SW W
Sbjct: 589 DTDEYVKLFEPGYHERYYTAKFRVAPHDIDQLRKDMVKCYIEGVAWVLTYYYQGCASWNW 648
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 649 FYPYHYAPLATDFHGFSHLEIKFEEGT 675
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL + Y LS E
Sbjct: 707 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTVVRAQYPLLSEAE 758
>gi|9369381|gb|AAF87130.1|AC006434_26 F10A5.15 [Arabidopsis thaliana]
Length = 1037
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 275/372 (73%), Gaps = 8/372 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP ++ +E++P E+ G KIP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ ++ AE R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN+D GWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
GLATHE +F+I+RE + P Q C +CGQMGH C G + ES G +F+
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEK-GDGNDFV 298
Query: 300 -----FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ + VLREYLE E+ +PN PF ER +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 KKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 355 GAVDRLVNLYKK 366
GA++ L+ +YKK
Sbjct: 359 GAINLLMAVYKK 370
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGL 445
++ D + + EE D+V+L + G+++RYYE KF V P++ R V +Y GL
Sbjct: 514 IREKSDAFNSDTTEE---DKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGL 570
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YY +G SW+W++P+HYAPFASD ++ E+D FE GT
Sbjct: 571 CWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGT 613
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGK+F+WQG+A LPF+DE RL +A++ L+ EE
Sbjct: 645 NSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEE 696
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
++ G+LTD L+RV+ +Q +G ED+IF+KR R K K + +M
Sbjct: 374 SFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATKRMDD 433
Query: 648 QS-TKAPSFIPGGQF-------APQDSP 667
++ T P +P +F AP SP
Sbjct: 434 EAPTVQPDLVPVARFSGSRLASAPTPSP 461
>gi|156839637|ref|XP_001643507.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
gi|156114121|gb|EDO15649.1| hypothetical protein Kpol_473p8 [Vanderwaltozyma polyspora DSM
70294]
Length = 1057
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/372 (54%), Positives = 269/372 (72%), Gaps = 22/372 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +ED PQ V+G ++P D S PN NG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDAPQVVDGVQLPIDYSAPNQNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P++EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPENEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETAEKIAEVAR---IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ KI + AR +REK I + K + +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDA--KIQDEAREEIMREKEEIGEHIDESVRNKKT-WDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK +++I+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMG----HEMKECVGLDAEPNPESVITFG 293
I LGLATHEP+F I+RE DV Q H K+ + + E + ++
Sbjct: 237 IFLGLATHEPHFKILRE----------DVFAQGNNRKRHNFKDNINM-TEEEKQIIMKED 285
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
S+ F+++ +SVLREYL EL + LPFP+ ERA+DDWVFMCFF GNDFLPHLPSL++R
Sbjct: 286 SQKPFLWLHISVLREYLSAELWVQRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPSLDVR 345
Query: 354 EGAVDRLVNLYK 365
E ++D L++++K
Sbjct: 346 ENSIDILLDIWK 357
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 86/143 (60%), Gaps = 9/143 (6%)
Query: 354 EGAVDRLVN-LYKKTVYKTQEQLRQEENGGG-GGRGVKRSFDDV------DESSEEEESN 405
E D L N + + V + ++L EE G G+ + + D V + +S +++
Sbjct: 544 ESKEDELTNDIEAEIVAEVADELNDEEGEDGESGQNTEDTNDVVPGISPFEGTSGVIDTD 603
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
+ VRL+E G+ RYY SKF++ +++I V Y+ G+ WVL YYYQGC SW WY+P
Sbjct: 604 ESVRLYEPGYHSRYYTSKFNIAEENITPLSRKVVRSYIEGVSWVLLYYYQGCASWNWYYP 663
Query: 465 FHYAPFASDFINIAEVDTNFETG 487
+HYAPFASDF NIA+++ NFE G
Sbjct: 664 YHYAPFASDFTNIADMEINFELG 686
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS I+DFYP +F ID+NGKK +WQG+ALLPF+DEERL K++ Y+ L+ E
Sbjct: 719 DSEIVDFYPVEFLIDMNGKKMSWQGIALLPFIDEERLLKSVRSQYKVLTDSE 770
>gi|367010234|ref|XP_003679618.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
gi|359747276|emb|CCE90407.1| hypothetical protein TDEL_0B02780 [Torulaspora delbrueckii]
Length = 1030
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/368 (53%), Positives = 265/368 (72%), Gaps = 15/368 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQVVDGVTLPIDYAAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E +V R RE++ G + + +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQVENEAREQVMREREQV---GEFIDDSVKNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DPGWK ++VI+SDA VPGEGEHKIM+++R QRA P ++PNT HC+ G DADL
Sbjct: 177 WISFKLSTDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I LGLATHEP+F I+RE+ R H + + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQNNR-------KRHNFTDSLNM-TEEEKQLIAKQDSEKP 288
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ +SVLREYL EL +P L P++ ERA+DDWVFMCFF GNDFLPHLPSL++RE ++
Sbjct: 289 FLWLHISVLREYLAAELWVPKLSMPFNLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSI 348
Query: 358 DRLVNLYK 365
D L++++K
Sbjct: 349 DILLDIWK 356
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+S+ EV+L+E G+++RYY +KF++ + +I A R + YV G+ WVL YYYQGC SW W
Sbjct: 600 DSDVEVKLYEPGYRERYYVAKFNIKESEIEALRKDLVRRYVEGVSWVLAYYYQGCASWDW 659
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFASDF IA++ FE G
Sbjct: 660 YYPYHYAPFASDFFGIADMKVEFEEG 685
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA + PS P DS IIDFYP +F ID+NGKK +WQG+ALLPF++ +RL + +
Sbjct: 700 AASAHTLPSIFKPLMSEP-DSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIEAKRLLRVV 758
Query: 706 APYYEKLS 713
Y +L+
Sbjct: 759 RNQYSRLT 766
>gi|414876882|tpg|DAA54013.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 591
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR +PNT+HCL G DADLIML
Sbjct: 180 RRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV--- 296
LATHE +F+I+RE + P Q C +CGQ+GH C G E G+ V
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R D+ S EE D+V+L E G+++RYYE KF P+ R V +Y GLCW
Sbjct: 520 REKSDIFNSDNPEE--DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKW 461
V+ YYY+G SW+W
Sbjct: 578 VMHYYYEGVCSWQW 591
>gi|151945677|gb|EDN63918.1| 5'-3'-exoribonuclease [Saccharomyces cerevisiae YJM789]
gi|190407386|gb|EDV10653.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259149530|emb|CAY86334.1| Rat1p [Saccharomyces cerevisiae EC1118]
gi|323346498|gb|EGA80785.1| Rat1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763283|gb|EHN04813.1| Rat1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1006
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/370 (53%), Positives = 268/370 (72%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQNSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|336271881|ref|XP_003350698.1| hypothetical protein SMAC_02370 [Sordaria macrospora k-hell]
gi|380094860|emb|CCC07362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 955
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 210/381 (55%), Positives = 262/381 (68%), Gaps = 26/381 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VED+P + +G IP D +KPNPNG EFDNLYLDMNG
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVVEDQPITMPDGTVIPVDCTKPNPNGEEFDNLYLDMNG-- 58
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PAPKDE+EMMV +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 59 --------PPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 110
Query: 120 RASKETAEKIAEVARIREKLLA-DGCIL----PPEKEKGSHFDSNCITPGTPFMARLSAC 174
RA++E EK + + E L +G ++ P E FDSN ITPGTPFM L+A
Sbjct: 111 RAAREAMEKEEDKQKFVELLKKQNGNMIQQEEPVETVVKKAFDSNSITPGTPFMDILAAS 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +LN DP W +KVI+SDA VPGEGEHKIM+++R QR P+HDPNT+H + G D
Sbjct: 171 LKYWCSYKLNTDPAWANMKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLD 230
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE----- 287
ADLIMLGLATHEP+F ++RE+ +RP C +CGQ GH+ C G E N E
Sbjct: 231 ADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGEFDEKD 290
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+VI FI++ +S+LREYL EL +P LPF ++ ERA+DDWVFMCFFVGNDFLPHL
Sbjct: 291 AVIPLKP---FIWLHVSILREYLAIELDVPGLPFQFNLERAIDDWVFMCFFVGNDFLPHL 347
Query: 348 PSLEIREGAVDRLVNLYKKTV 368
P+LEIRE +D L ++K +
Sbjct: 348 PALEIRENGIDTLTAIWKDNL 368
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Query: 387 GVKRSFDDVDESSEEE-ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGL 445
G + S +V E SE + E ND VRLWE+G+ DRYYE KF V + DI FR VG Y GL
Sbjct: 551 GPEASSSEVTEVSENDAEPNDSVRLWEEGYADRYYEQKFKVDRKDIDFRHKVGRAYAEGL 610
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WVL+YY+QGC SW+W++P+HYAPFA+DF+++ +++ FE G
Sbjct: 611 AWVLEYYFQGCPSWEWFYPYHYAPFAADFVDLGKMEIKFEKG 652
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYPE+F+IDLNGKK AWQGVALLPF+D RL A+ LS E+
Sbjct: 684 ENSEIIDFYPEEFEIDLNGKKMAWQGVALLPFIDMPRLLSAMETKTHLLSPED 736
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQT----ETMFKMR---NKMKKRR---E 640
G+LT G LERVQ IM L ED IF++R++ E FK R ++ ++RR
Sbjct: 373 GYLTKDGQADLERVQYIMAGLAKQEDAIFRRRKEAEDRREAGFKRRKLADEARQRRAQGS 432
Query: 641 RQMKMAAQSTKAPS 654
RQ++ AA+++ P+
Sbjct: 433 RQIRQAAENSGPPA 446
>gi|330916061|ref|XP_003297277.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
gi|311330133|gb|EFQ94619.1| hypothetical protein PTT_07622 [Pyrenophora teres f. teres 0-1]
Length = 883
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/383 (54%), Positives = 259/383 (67%), Gaps = 22/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP ++ E+ P++V IP D + PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPEDKPAPK E +MM+AIFE DR+ +VRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
A++E EK E A ++ L + I E+ +DSN ITPGTPFM L+ L
Sbjct: 121 AAREAKEKDEERAEFQKILNSQKASRGEDIDTLEEVMEKTWDSNAITPGTPFMHLLAESL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ + DP WK +KVI+SDA+VPGEGEHKIM++IR QRA P HDPNT H + G DA
Sbjct: 181 QYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIML LATHEP+F ++RE+ + + + C CG+ GH C P E +T
Sbjct: 241 DLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNC----EFPEDEKKLTEE 296
Query: 294 SEVE-----------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGND 342
E +I++ +VLREYL E+ P F Y ER+LDDWVFMCFFVGND
Sbjct: 297 EAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFFVGND 356
Query: 343 FLPHLPSLEIREGAVDRLVNLYK 365
FLPHLPSLEIR+ +D L+++++
Sbjct: 357 FLPHLPSLEIRDQGIDLLISIWR 379
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D + LWEDG+++RYYE KF V +DIAFR V +Y GLCWVL YY QGC SW WYFP
Sbjct: 586 DTIMLWEDGYEERYYEQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPH 645
Query: 466 HYAPFASDFINIAEVDTN--FETG 487
HYAPFA+DF+ + ++D FE G
Sbjct: 646 HYAPFAADFVGLEDMDPRKLFEKG 669
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I+DFYPEDF IDLNGKKFAWQGVA+LPF+DE+RL +A+ Y +LS +E
Sbjct: 702 NSSIVDFYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMGTKYPELSDDE 753
>gi|392296379|gb|EIW07481.1| Rat1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1006
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/370 (53%), Positives = 268/370 (72%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQNSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|256273435|gb|EEU08371.1| Rat1p [Saccharomyces cerevisiae JAY291]
Length = 1006
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/370 (53%), Positives = 268/370 (72%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQNSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|19571126|dbj|BAB86550.1| putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
Length = 1064
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 276/373 (73%), Gaps = 11/373 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++ E+ G K+P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK +KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGL------DAEPNPESVITFG 293
LATHE +F+I+RE + P Q C +CGQ+GH C G + + E+++
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVP-- 297
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ + F+ + LREYLE E M N PFP FER +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 298 -KKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIR 356
Query: 354 EGAVDRLVNLYKK 366
EGA++ L+ +YKK
Sbjct: 357 EGAINLLMAVYKK 369
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+++L E G+++RYYE KF P R V +Y GLCW
Sbjct: 520 REKSDVFNSENPEE--DKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE G+
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 618
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL + L+ EE+
Sbjct: 650 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702
>gi|18410905|ref|NP_565114.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
gi|75262832|sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein
EXORIBONUCLEASE 3
gi|11875628|gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana]
gi|332197621|gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis thaliana]
Length = 1020
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 223/372 (59%), Positives = 275/372 (73%), Gaps = 8/372 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL+ KYP ++ +E++P E+ G KIP D+SKPNPN +E+DNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIEGIKIPVDTSKPNPNNLEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P +E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ ++ AE R+RE+ +G LPP K FDSN ITPGT FM LS L YY+H
Sbjct: 121 SAKDASDAAAEEERLREEFEREGRRLPP-KVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN+D GWK IKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
GLATHE +F+I+RE + P Q C +CGQMGH C G + ES G +F+
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEK-GDGNDFV 298
Query: 300 -----FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ + VLREYLE E+ +PN PF ER +DD++F+CFFVGNDFLPH+P+LEIRE
Sbjct: 299 KKPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 355 GAVDRLVNLYKK 366
GA++ L+ +YKK
Sbjct: 359 GAINLLMAVYKK 370
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGL 445
++ D + + EE D+V+L + G+++RYYE KF V P++ R V +Y GL
Sbjct: 514 IREKSDAFNSDTTEE---DKVKLGQPGWRERYYEEKFSVVTPEEMERVRKDVVLKYTEGL 570
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
CWV+ YY +G SW+W++P+HYAPFASD ++ E+D FE GT
Sbjct: 571 CWVMHYYMEGVCSWQWFYPYHYAPFASDLKDLGEMDIKFELGT 613
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGK+F+WQG+A LPF+DE RL +A++ L+ EE
Sbjct: 645 NSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEE 696
Score = 39.7 bits (91), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
++ G+LTD L+RV+ +Q +G ED+IF+KR R K K + +M
Sbjct: 374 SFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKRAMQHQRQAERVKRDKAGKATKRMDD 433
Query: 648 QS-TKAPSFIPGGQFA 662
++ T P +P +F+
Sbjct: 434 EAPTVQPDLVPVARFS 449
>gi|367005296|ref|XP_003687380.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
gi|357525684|emb|CCE64946.1| hypothetical protein TPHA_0J01240 [Tetrapisispora phaffii CBS 4417]
Length = 1113
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/370 (53%), Positives = 270/370 (72%), Gaps = 12/370 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E+ PQ V+G +P D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEETPQIVDGVALPIDYSSENPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE++P P+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA-EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ E A +++K A I K+K + +DSN ITPGTPFM +L+A L Y+
Sbjct: 120 SARDAKFENEAREEILKDKEAAGQVIDEAVKQKKT-WDSNAITPGTPFMDKLAAALRYWT 178
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L+ DPGWK ++VI+SDA VPGEGEHK+M++IR QRA P+++PNT HC+ G DADLI
Sbjct: 179 AFKLSTDPGWKNLQVIISDATVPGEGEHKLMNFIRAQRADPEYNPNTTHCIYGLDADLIF 238
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF-GSEVEF 298
LGLATHEP+F I+RE+ ++P H K+ GLD + +IT S+ F
Sbjct: 239 LGLATHEPHFKILREDVFAQGSKP------KKHNFKD--GLDMTEEEKQLITKEDSQKPF 290
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+++ ++VLREYL EL +P L FP+ ERA+DDWVFMCFF GNDFLPHLP L++RE ++D
Sbjct: 291 LWLHINVLREYLSAELWVPRLSFPFDIERAIDDWVFMCFFCGNDFLPHLPCLDVRENSID 350
Query: 359 RLVNLYKKTV 368
L++++K+ +
Sbjct: 351 ILLDIWKRIL 360
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+++D V+L+E GF++RYY SKF+V + DI + V Y+ G+ WVL YYYQGC SW W
Sbjct: 616 DTDDYVKLYEPGFRERYYASKFNVDEHDIDQLKKDVVRYYIEGVSWVLLYYYQGCASWNW 675
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFA+DF N+ ++ F+ G
Sbjct: 676 YYPYHYAPFAADFTNLTDISIKFDLG 701
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFYPE F ID+NGKK +WQG+ALLPF+DE RL KA+ YE LS +E
Sbjct: 735 SEIIDFYPEQFPIDMNGKKMSWQGIALLPFIDETRLLKAVRSKYEFLSDQE 785
>gi|13605795|gb|AAK32883.1|AF367296_1 AT5g42540/K16E1_1 [Arabidopsis thaliana]
gi|20147139|gb|AAM10286.1| AT5g42540/K16E1_1 [Arabidopsis thaliana]
Length = 813
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/382 (57%), Positives = 273/382 (71%), Gaps = 10/382 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVP+F+RWL ++YP I +E++P EVNG IP DSSKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YY
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLI
Sbjct: 180 IHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV- 296
ML LATHE +F+I+RE F P + C +CGQ GH +C G E + ++V
Sbjct: 240 MLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVV 299
Query: 297 ---EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ FV + +LREYLE ++ +P + +R +DD++F+CFFVGNDFLPH+P+LEIR
Sbjct: 300 VKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIR 357
Query: 354 EGAVDRLVNLYKKTVYKTQEQL 375
EGA++ L+++YK ++ L
Sbjct: 358 EGAIELLMSVYKNKFRSAKKYL 379
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP--KDD 430
E+L EE+ + + R D S E+ D+V+L + G+++RYYE KF ++
Sbjct: 490 EELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ--DKVKLNKVGWRERYYEEKFAAKSVEEM 547
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT-- 488
R V +Y GLCW++ YYY G SW W++P+HYAPFASD + ++D FE G+
Sbjct: 548 EQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPF 607
Query: 489 QPVN 492
+P N
Sbjct: 608 KPFN 611
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF+ID+NGK+++WQG++ LPFV+E+RL +A A + L+ EE
Sbjct: 637 DSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 688
>gi|15238990|ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein
EXORIBONUCLEASE 2
gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis thaliana]
gi|51970342|dbj|BAD43863.1| unnamed protein product [Arabidopsis thaliana]
gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007441|gb|AED94824.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/382 (57%), Positives = 273/382 (71%), Gaps = 10/382 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVP+F+RWL ++YP I +E++P EVNG IP DSSKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YY
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLI
Sbjct: 180 IHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV- 296
ML LATHE +F+I+RE F P + C +CGQ GH +C G E + ++V
Sbjct: 240 MLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVV 299
Query: 297 ---EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ FV + +LREYLE ++ +P + +R +DD++F+CFFVGNDFLPH+P+LEIR
Sbjct: 300 VKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIR 357
Query: 354 EGAVDRLVNLYKKTVYKTQEQL 375
EGA++ L+++YK ++ L
Sbjct: 358 EGAIELLMSVYKNKFRSAKKYL 379
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP--KDD 430
E+L EE+ + + R D S E+ D+V+L + G+++RYYE KF ++
Sbjct: 490 EELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ--DKVKLNKVGWRERYYEEKFAAKSVEEM 547
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
R V +Y GLCW++ YYY G SW W++P+HYAPFASD + ++D FE G+
Sbjct: 548 EQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGS 605
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF+ID+NGK+++WQG++ LPFV+E+RL +A A + L+ EE
Sbjct: 637 DSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 688
>gi|62318783|dbj|BAD93823.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1012
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/382 (57%), Positives = 273/382 (71%), Gaps = 10/382 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVP+F+RWL ++YP I +E++P EVNG IP DSSKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YY
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLI
Sbjct: 180 IHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV- 296
ML LATHE +F+I+RE F P + C +CGQ GH +C G E + ++V
Sbjct: 240 MLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVV 299
Query: 297 ---EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ FV + +LREYLE ++ +P + +R +DD++F+CFFVGNDFLPH+P+LEIR
Sbjct: 300 VKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIR 357
Query: 354 EGAVDRLVNLYKKTVYKTQEQL 375
EGA++ L+++YK ++ L
Sbjct: 358 EGAIELLMSVYKNKFRSAKKYL 379
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP--KDD 430
E+L EE+ + + R D S E+ D+V+L + G+++RYYE KF ++
Sbjct: 490 EELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ--DKVKLNKVGWRERYYEEKFAAKSVEEM 547
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
R V +Y GLCW++ YYY G SW W++P+HYAPFASD + ++D FE G+
Sbjct: 548 EQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGS 605
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF+ID+NGK+++WQG++ LPFV+E+RL +A A + L+ EE
Sbjct: 637 DSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 688
>gi|115441335|ref|NP_001044947.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|56785082|dbj|BAD82721.1| putative 5'-3' exoribonuclease (XRN3) [Oryza sativa Japonica Group]
gi|113534478|dbj|BAF06861.1| Os01g0872700 [Oryza sativa Japonica Group]
gi|215713440|dbj|BAG94577.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1068
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 276/373 (73%), Gaps = 11/373 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++ E+ G K+P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK +KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGL------DAEPNPESVITFG 293
LATHE +F+I+RE + P Q C +CGQ+GH C G + + E+++
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVP-- 297
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ + F+ + LREYLE E M N PFP FER +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 298 -KKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIR 356
Query: 354 EGAVDRLVNLYKK 366
EGA++ L+ +YKK
Sbjct: 357 EGAINLLMAVYKK 369
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+++L E G+++RYYE KF P R V +Y GLCW
Sbjct: 520 REKSDVFNSENPEE--DKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE G+
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 618
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL + L+ EE+
Sbjct: 650 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702
>gi|334188143|ref|NP_001190450.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
gi|332007442|gb|AED94825.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
Length = 1023
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/382 (57%), Positives = 273/382 (71%), Gaps = 10/382 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--KIPFDSSKPNPNGMEFDNLYLDMNGI 58
MGVP+F+RWL ++YP I +E++P EVNG IP DSSKPNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPEDKP+P E+ +F+ IDRLF +VRPRKLL+MAIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+K+ AE AE ++RE+ +G LPP K FDSN ITPGT FMA LS L YY
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPP-KVDSQVFDSNVITPGTEFMATLSFALRYY 179
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH RLN+DPGWK IKVILSDANVPGEGEHKIM YIR + P ++PNT HCL G DADLI
Sbjct: 180 IHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLI 239
Query: 239 MLGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV- 296
ML LATHE +F+I+RE F P + C +CGQ GH +C G E + ++V
Sbjct: 240 MLSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVV 299
Query: 297 ---EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ FV + +LREYLE ++ +P + +R +DD++F+CFFVGNDFLPH+P+LEIR
Sbjct: 300 VKKPYEFVNIWILREYLEHDMQIPGA--KKNLDRLIDDFIFICFFVGNDFLPHMPTLEIR 357
Query: 354 EGAVDRLVNLYKKTVYKTQEQL 375
EGA++ L+++YK ++ L
Sbjct: 358 EGAIELLMSVYKNKFRSAKKYL 379
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP--KDD 430
E+L EE+ + + R D S E+ D+V+L + G+++RYYE KF ++
Sbjct: 490 EELDNEEDLKFKLKKLLRDKGDGFRSGNGEQ--DKVKLNKVGWRERYYEEKFAAKSVEEM 547
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
R V +Y GLCW++ YYY G SW W++P+HYAPFASD + ++D FE G+
Sbjct: 548 EQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGS 605
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF+ID+NGK+++WQG++ LPFV+E+RL +A A + L+ EE
Sbjct: 637 DSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEE 688
>gi|125528546|gb|EAY76660.1| hypothetical protein OsI_04616 [Oryza sativa Indica Group]
Length = 1068
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/373 (60%), Positives = 276/373 (73%), Gaps = 11/373 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++ E+ G K+P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK +KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGL------DAEPNPESVITFG 293
LATHE +F+I+RE + P Q C +CGQ+GH C G + + E+++
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVP-- 297
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ + F+ + LREYLE E M N PFP FER +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 298 -KKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIR 356
Query: 354 EGAVDRLVNLYKK 366
EGA++ L+ +YKK
Sbjct: 357 EGAINLLMAVYKK 369
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+++L E G+++RYYE KF P R V +Y GLCW
Sbjct: 520 REKSDVFNSENPEE--DKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE G+
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 618
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL + L+ EE+
Sbjct: 650 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702
>gi|242056911|ref|XP_002457601.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
gi|241929576|gb|EES02721.1| hypothetical protein SORBIDRAFT_03g010040 [Sorghum bicolor]
Length = 1066
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 228/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G K+P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE + P Q C +CGQ+GH C G A E +
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEFDEKGDAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R D+ S +E D+V+L E G+++RYYE KF P+ R V +Y GLCW
Sbjct: 520 REKSDIFNSDNPDE--DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE GT
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGT 618
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL + L+ EE+
Sbjct: 651 SPIIDFYPIDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 702
>gi|349581214|dbj|GAA26372.1| K7_Rat1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1006
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/370 (53%), Positives = 268/370 (72%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQISE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|365987598|ref|XP_003670630.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
gi|343769401|emb|CCD25387.1| hypothetical protein NDAI_0F00680 [Naumovozyma dairenensis CBS 421]
Length = 1034
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 193/368 (52%), Positives = 267/368 (72%), Gaps = 14/368 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+ K+P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDNVKLPLDYSLPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R +E++ G ++ + +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEILRQKEEI---GEMIDDAVKNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKSLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I LGLATHEP+F I+RE+ R + G+ + + + + +E + ++
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNR------RRGNTLADSINM-SEEEKRLIQEQDAQKP 289
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ +S LR+YL EL +P LPFP+ ERA+DDWVFMCFF GNDFLPHLP L++RE ++
Sbjct: 290 FLWLHISTLRDYLSAELWIPRLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSI 349
Query: 358 DRLVNLYK 365
D L++++K
Sbjct: 350 DILLDIWK 357
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ VRL+E G+++RYY++K V +DI + R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEAVRLFEPGYRERYYKAKCYVSDEDIESLRKGMVKSYIEGVSWVLLYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFA DF I ++D FE G
Sbjct: 652 YYPYHYAPFAQDFFGITDMDVKFELG 677
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
DSPIIDFYP +F ID+NGKK +WQG++LLPF+DE+RL K + Y KL+
Sbjct: 710 DSPIIDFYPAEFPIDMNGKKMSWQGISLLPFIDEKRLLKTVREQYPKLT 758
>gi|359490022|ref|XP_002275560.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
Length = 834
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/373 (55%), Positives = 262/373 (70%), Gaps = 13/373 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAF+RWL+ +YP +V+ VED+P VNG + D+++PNPNG EFDNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAVVNGVSVAVDTTRPNPNGNEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE PAPK ++ A+F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE A+ + R++ ++ +L ++ DSN ITPGT FMA LS+ L YYIH
Sbjct: 121 AAKEAADDASGTERLKTVFESEMEML-ALLDQTKKLDSNVITPGTEFMALLSSALKYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
R+N DPGW+GIKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 180 LRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIREEF-------KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
LATHE +F+I+RE+ K N+ R + + K+ E E + F
Sbjct: 240 ALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQ-----GEVGGEDIEDFI 294
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
S +F F+ + LR+YL ++++P+ ER +DD+VFMC FVGNDFLPH+PSLEI
Sbjct: 295 SRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEIS 354
Query: 354 EGAVDRLVNLYKK 366
EGA+D L+ +YKK
Sbjct: 355 EGAIDLLMTVYKK 367
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D+++L EDG+K+R+Y KF+ +D R+ +Y+ G+CWV+ YYYQG SW+W++
Sbjct: 482 DKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFY 541
Query: 464 PFHYAPFASDFINIAEVDTNFETG 487
P+HYAPFASD + ++D F G
Sbjct: 542 PYHYAPFASDIYGLDQLDIQFTLG 565
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI+DFYP DF++D+NGK++ WQ + LPF+ E RL +A L+ +E
Sbjct: 597 ETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKE 649
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT+S +V LERV+ MQ +G E+ IF+KR Q +
Sbjct: 374 GYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQ 409
>gi|189191016|ref|XP_001931847.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973453|gb|EDU40952.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1104
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/383 (54%), Positives = 259/383 (67%), Gaps = 22/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP ++ E+ P++V IP D + PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDAVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPEDKPAPK E +MM+AIFE DR+ +VRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
A++E EK E A ++ L + I E+ +DSN ITPGTPFM L+ L
Sbjct: 121 AAREAKEKDEERAEFQKILNSQKASRGEDINTLEEVVEKTWDSNAITPGTPFMHLLAESL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ + DP WK +KVI+SDA+VPGEGEHKIM++IR QRA P HDPNT H + G DA
Sbjct: 181 QYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFIRSQRAMPTHDPNTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIML LATHEP+F ++RE+ + + + C CG+ GH C P E +T
Sbjct: 241 DLIMLSLATHEPHFKVLREDVFYDSGKDKVCTRCGRKGHIRTNC----EFPEDEKKLTEE 296
Query: 294 SEVE-----------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGND 342
E +I++ +VLREYL E+ P F Y ER+LDDWVFMCFFVGND
Sbjct: 297 EAAEEWATSEHQLKPYIWLHTNVLREYLAVEMDTPKRTFKYDLERSLDDWVFMCFFVGND 356
Query: 343 FLPHLPSLEIREGAVDRLVNLYK 365
FLPHLPSLEIR+ +D L+++++
Sbjct: 357 FLPHLPSLEIRDQGIDLLISIWR 379
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D + LWEDG+++RYYE KF V +DIAFR V +Y GLCWVL YY QGC SW WYFP
Sbjct: 586 DTIMLWEDGYEERYYEQKFHVAPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPH 645
Query: 466 HYAPFASDFINIAEVDTN--FETG 487
HYAPFA+DF+ + ++D FE G
Sbjct: 646 HYAPFAADFVGLEDMDPRKLFEKG 669
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 45/52 (86%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I+DFYPEDF IDLNGKKFAWQGVA+LPF+DE+RL +A+A Y +LS +E
Sbjct: 702 NSSIVDFYPEDFPIDLNGKKFAWQGVAVLPFIDEKRLLEAMATKYPELSDDE 753
>gi|413921159|gb|AFW61091.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1058
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G ++P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE F P Q C +CGQ+GH C G A E +
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+V+L E G++DRYYE KF P+ R V +Y GLCW
Sbjct: 517 REKSDVFNSENSEE--DKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCW 574
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD ++++++ FE G+
Sbjct: 575 VMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGS 615
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+F+WQG+A LPF++E+RL + + L+ EE+
Sbjct: 647 NSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEA 699
>gi|413921160|gb|AFW61092.1| hypothetical protein ZEAMMB73_651968 [Zea mays]
Length = 1079
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G ++P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE F P Q C +CGQ+GH C G A E +
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+V+L E G++DRYYE KF P+ R V +Y GLCW
Sbjct: 517 REKSDVFNSENSEE--DKVKLGEPGWRDRYYEEKFGARTPERMEEIRRDVALKYTEGLCW 574
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD ++++++ FE G+
Sbjct: 575 VMHYYYEGVCSWQWFYPYHYAPFASDLTSLSQLNITFELGS 615
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+F+WQG+A LPF++E+RL + + L+ EE+
Sbjct: 647 NSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIEEDRLLAEIKKVEDTLTPEEA 699
>gi|410078313|ref|XP_003956738.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
gi|372463322|emb|CCF57603.1| hypothetical protein KAFR_0C06110 [Kazachstania africana CBS 2517]
Length = 1039
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 258/366 (70%), Gaps = 13/366 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E+ PQ V+G +P D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIICPVLEEYPQVVDGVALPIDYASPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLLMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ + G I+ +K +DSN ITPGTPFM +L+A L Y+
Sbjct: 120 SARDAQIANEAREEELRERENYGEIIDDALKKKKTWDSNAITPGTPFMDKLAAALRYWTA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
GLATHEP+F I+RE+ F + + M E KE ++ +E F+
Sbjct: 240 GLATHEPHFKILREDVFAQDNRKRTTFSDNMSEEEKEL-----------IMKKDAEKPFL 288
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ +SVLREYL EL +P L F + ERA+DDWVFMCFF GNDFLPHLPSL++RE ++D
Sbjct: 289 WLHISVLREYLAAELWIPRLSFNFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRENSIDI 348
Query: 360 LVNLYK 365
L++++K
Sbjct: 349 LLDIWK 354
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAF--RLMVGHEYVLGLCWVLKYYYQGCRSWK 460
+++D V+L+E G+++RYY KF + KD+I R MV YV G+ WVL+YYYQGC SW
Sbjct: 602 DTDDNVKLYESGYRERYYTEKFHISKDEIEIVRRDMV-RSYVEGVSWVLRYYYQGCASWN 660
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+PFHYAPFASDF +I ++ F+ G
Sbjct: 661 WYYPFHYAPFASDFFDIKDIKVEFDLG 687
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 643 MKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
+ A+ T P F P + DSPIIDFYP +F ID+NGKK +WQG+ALLPF+DE+RL
Sbjct: 700 LPAASGHTLPPIFRP--LMSEADSPIIDFYPPEFPIDMNGKKMSWQGIALLPFIDEKRLL 757
Query: 703 KALAPYYEKLSVEE 716
+ + Y KLS E
Sbjct: 758 EVVRAQYPKLSDAE 771
>gi|169606446|ref|XP_001796643.1| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
gi|160706992|gb|EAT86095.2| hypothetical protein SNOG_06264 [Phaeosphaeria nodorum SN15]
Length = 1021
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/383 (53%), Positives = 261/383 (68%), Gaps = 22/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP ++ E++P++V + IP D + PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEEQPKKVGDEVIPVDRTGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPEDKPAPK E +MM+AIFE DR+ +VRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPAPKTEADMMMAIFEYTDRVVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
A++E EK E A + L + I E+ +DSN ITPGTPFM L+ L
Sbjct: 121 AAREAKEKDEERAEFLKMLNSQKASRGEDINSLEEVVEKTWDSNAITPGTPFMHLLAESL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ + DP WK +KVI+SDA+VPGEGEHKIM+++R QRA P HDPNT+H + G DA
Sbjct: 181 QYWCAYKFTTDPSWKDMKVIISDASVPGEGEHKIMNFVRSQRAIPTHDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIML LATHEP+F ++RE+ F + + C CG+ GH C P+ +T
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFFDSGKDKACTRCGRKGHIRNNC----EFPDDGKKLTEE 296
Query: 294 SEVE-----------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGND 342
E +I++ ++LREYL E+ P F Y ER+LDDWVFMCFFVGND
Sbjct: 297 EAAEEWAASEHPPKPYIWLHTNILREYLAVEMETPKRRFKYDLERSLDDWVFMCFFVGND 356
Query: 343 FLPHLPSLEIREGAVDRLVNLYK 365
FLPHLPSLEIR+ +D L+++++
Sbjct: 357 FLPHLPSLEIRDQGIDLLISIWR 379
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 81/137 (59%), Gaps = 6/137 (4%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN--DEVRLWEDGFKDRYYESKFDVP 427
+ ++L +NG G E+ ++E+ D ++LWEDG+++RYYE KF V
Sbjct: 517 RKADELEDADNGTPGRNTPVVPASPAAETPKKEDGTPEDTIKLWEDGYEERYYEQKFHVA 576
Query: 428 KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN--FE 485
DDIAFR V +Y GLCWVL YY QGC SW WYFP HYAPFA+DF+ + ++D FE
Sbjct: 577 PDDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLEDMDPRKLFE 636
Query: 486 TGT--QPVNNNRILKFI 500
GT P +L FI
Sbjct: 637 KGTPFHPYEQLMVLPFI 653
>gi|414876883|tpg|DAA54014.1| TPA: hypothetical protein ZEAMMB73_402768 [Zea mays]
Length = 1066
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFGEVFQCMFDYIDRLFVMVRPRRLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR +PNT+HCL G DADLIML
Sbjct: 180 RRLNYDPGWKQIKVILSDANVPGEGEHKIMSYIRGQRNLSGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV--- 296
LATHE +F+I+RE + P Q C +CGQ+GH C G E G+ V
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGGAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFKIDFERIVDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R D+ S EE D+V+L E G+++RYYE KF P+ R V +Y GLCW
Sbjct: 520 REKSDIFNSDNPEE--DKVKLGEPGWRERYYEEKFGARTPEQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE GT
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNIKFELGT 618
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE+RL + L+ EE+
Sbjct: 650 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEDRLLAEIKKVEHTLTPEEA 702
>gi|254579256|ref|XP_002495614.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
gi|238938504|emb|CAR26681.1| ZYRO0B15642p [Zygosaccharomyces rouxii]
Length = 1012
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/368 (52%), Positives = 264/368 (71%), Gaps = 15/368 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVIEEQPQVVDGVTLPIDYTAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ + RI ++ G I+ + +DSN ITPGTPFM +L+A L Y+
Sbjct: 120 SAKDAQIENENRERIMQEREQLGEIIDGAVKTKKTWDSNAITPGTPFMDKLAAALRYWCS 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGWK ++VI+SDA VPGEGEHKIM+++R QRA ++PNT HC+ G DADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADAQYNPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMG---HEMKECVGLDAEPNPESVITFGSEVE 297
GLATHEP+F ++RE DV Q H +K+ + + +E + + SE
Sbjct: 240 GLATHEPHFKVLRE----------DVFAQGNNKRHNLKDSLNM-SEEEKQMIAKQDSEKP 288
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ +SVLREYL EL +P +PFP+ ERA+DDWVFMCFF GNDFLPHLP L++RE ++
Sbjct: 289 FLWLHISVLREYLSAELWVPRMPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSI 348
Query: 358 DRLVNLYK 365
D L++++K
Sbjct: 349 DILLDIWK 356
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+++ V+L E G+ +RYY KF + + I A R + Y+ G+ WVL YYYQGC SW W
Sbjct: 604 DTDQAVKLHEPGYHERYYTEKFHISPNHIDALRKDLVKCYIEGVSWVLLYYYQGCASWTW 663
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAP A+DF +++ F G
Sbjct: 664 YYPYHYAPLAADFFGFSDIKVEFPPG 689
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Query: 643 MKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
+ A+ T P F P + DS IIDFYP +F +D+NGKK WQG+ALLPF+DE+RL
Sbjct: 702 LPAASGHTLPPIFRP--LMSSPDSEIIDFYPTEFPVDMNGKKMPWQGIALLPFIDEKRLL 759
Query: 703 KALAPYYEKLSVEE 716
+ + Y KL+ EE
Sbjct: 760 QVVRAQYSKLTEEE 773
>gi|321260270|ref|XP_003194855.1| strand exchange protein (5'-3' exoribonuclease) [Cryptococcus
gattii WM276]
gi|317461327|gb|ADV23068.1| Strand exchange protein (5'-3' exoribonuclease), putative
[Cryptococcus gattii WM276]
Length = 1129
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/375 (54%), Positives = 259/375 (69%), Gaps = 10/375 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ ED P+++ G + P PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA++E A+K E + A G + E +D+N ITPGTPFM LS L
Sbjct: 121 SRRFRAAQEAADKEEERKEAVKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y++ +L DPGWK +K+ILSD++VPGEGEHKIMD+IR+QR+ P D NT H + G DA
Sbjct: 181 KYWVSYKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE-FKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESVITF 292
DLIML LATHEP+F ++RE+ F + P C CG++GH C G +P V
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKGDKKVKDPNVVEVA 300
Query: 293 GSE--VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+E FIF+ ++ LREYL EL +P +PFP+ E A+DDW+FM FFVGNDFLPHLPSL
Sbjct: 301 KTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL 360
Query: 351 EIREGAVDRLVNLYK 365
EIREGA+D L+ +++
Sbjct: 361 EIREGAIDVLLKIWR 375
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D+++LWE G+++RYYE KF V + F V Y+ GLCWVL+YYYQG +W W++P+
Sbjct: 689 DDIKLWEPGYRERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGVPAWDWFYPY 748
Query: 466 HYAPFASDFINIAEVDTNFET 486
HYAPFA DF ++ +D FET
Sbjct: 749 HYAPFAQDFRSVGSMDIKFET 769
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+DFYP DF+ID+NGKK AWQGVALLPF+D+ RL AL E LS +E
Sbjct: 802 EDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDE 854
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G+LT+ G V L+R Q+I++ L EDEIF+KR+ E + + K+RR + K
Sbjct: 383 GYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDEE--RQEHSQKRRRIEEHK 434
>gi|6324622|ref|NP_014691.1| Rat1p [Saccharomyces cerevisiae S288c]
gi|417592|sp|Q02792.3|XRN2_YEAST RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Ribonucleic
acid-trafficking protein 1; AltName: Full=p116
gi|172365|gb|AAA34960.1| Rat1p [Saccharomyces cerevisiae]
gi|386005|gb|AAB26818.1| transcription activator [Saccharomyces cerevisiae]
gi|1420179|emb|CAA99240.1| RAT1 [Saccharomyces cerevisiae]
gi|285814937|tpg|DAA10830.1| TPA: Rat1p [Saccharomyces cerevisiae S288c]
Length = 1006
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/370 (53%), Positives = 267/370 (72%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSASNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQNSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|242080797|ref|XP_002445167.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
gi|241941517|gb|EES14662.1| hypothetical protein SORBIDRAFT_07g005160 [Sorghum bicolor]
Length = 945
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/370 (61%), Positives = 272/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G ++P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVRVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFKCMFDYIDRLFIMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G L P K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRRL-PAKQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 QRLNYDPGWKKIKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE F P Q C +CGQ+GH C G A E +
Sbjct: 240 ALATHEVHFSILREVVFTPGQQDKCFLCGQVGHLAANCEGKAKRKAGEYDEKGEAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREYLE E MPN PF FER +DD++F+CFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYLEYEFRMPNPPFQIDFERIVDDFIFICFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDD 430
++L +EN + R DV S EE D+V+L E G++DRYYE KF P+
Sbjct: 500 QELENKENLKSMLKDALRGKSDVFNSENPEE--DKVKLGEPGWRDRYYEDKFGARTPERM 557
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
R V +Y GLCWV+ YYY+G SW+W++P+HYAPFASD ++++++ FE G
Sbjct: 558 EEIRRDVALKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLRSLSQLNITFELG 614
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 35/37 (94%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+SPI+DFYP DF++D+NGK+F+WQG+A LPF+DE+RL
Sbjct: 647 NSPIVDFYPTDFEVDMNGKRFSWQGIAKLPFIDEDRL 683
>gi|58268722|ref|XP_571517.1| 5'-3' exoribonuclease [Cryptococcus neoformans var. neoformans
JEC21]
gi|338819739|sp|P0CL88.1|XRN2_CRYNJ RecName: Full=5'-3' exoribonuclease 2
gi|57227752|gb|AAW44210.1| 5'-3' exoribonuclease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1127
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 257/375 (68%), Gaps = 10/375 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ ED P+++ G + P PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA++E A+K E + A G + E +D+N ITPGTPFM LS L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y++ +L DPGWK +K+ILSD++VPGEGEHKIMD+IR+QR+ P D NT H + G DA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE-FKPNQARP--CDVCGQMGHEMKECVGLD--AEPNPESVI 290
DLIML LATHEP+F ++RE+ F + P C CG++GH C +PN V
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEVA 300
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
FIF+ ++ LREYL EL +P +PFP+ E A+DDW+FM FFVGNDFLPHLPSL
Sbjct: 301 KTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL 360
Query: 351 EIREGAVDRLVNLYK 365
EIREGA+D L+ +++
Sbjct: 361 EIREGAIDVLLKIWR 375
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D+V+LWE G+++RYYE KF V + F V Y+ GLCWVL+YYYQG +W W++P+
Sbjct: 687 DDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGVPAWDWFYPY 746
Query: 466 HYAPFASDFINIAEVDTNFET 486
HYAPFA DF ++ +D FET
Sbjct: 747 HYAPFAQDFRDVGSMDIKFET 767
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+DFYP DF+ID+NGKK AWQGVALLPF+D+ RL AL E LS +E
Sbjct: 800 EDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDE 852
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G+LT+ G V L+R Q+I++ L EDEIF+KR+ E + + K+RR + K
Sbjct: 383 GYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDEE--RQEHSQKRRRIEEHK 434
>gi|134113168|ref|XP_774609.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819738|sp|P0CL89.1|XRN2_CRYNB RecName: Full=5'-3' exoribonuclease 2
gi|50257253|gb|EAL19962.1| hypothetical protein CNBF2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1130
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 257/375 (68%), Gaps = 10/375 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ ED P+++ G + P PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA++E A+K E + A G + E +D+N ITPGTPFM LS L
Sbjct: 121 SRRFRAAQEAADKEEERREAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y++ +L DPGWK +K+ILSD++VPGEGEHKIMD+IR+QR+ P D NT H + G DA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE-FKPNQARP--CDVCGQMGHEMKECVGLD--AEPNPESVI 290
DLIML LATHEP+F ++RE+ F + P C CG++GH C +PN V
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPHACKNCGKVGHIAANCKSDKKFKDPNVAEVA 300
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
FIF+ ++ LREYL EL +P +PFP+ E A+DDW+FM FFVGNDFLPHLPSL
Sbjct: 301 KTEDPKPFIFLDVACLREYLAVELVVPGMPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL 360
Query: 351 EIREGAVDRLVNLYK 365
EIREGA+D L+ +++
Sbjct: 361 EIREGAIDVLLKIWR 375
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D+V+LWE G+++RYYE KF V + F V Y+ GLCWVL+YYYQG +W W++P+
Sbjct: 687 DDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGVPAWDWFYPY 746
Query: 466 HYAPFASDFINIAEVDTNFET 486
HYAPFA DF ++ +D FET
Sbjct: 747 HYAPFAQDFRDVGSMDIKFET 767
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+DFYP DF+ID+NGKK AWQGVALLPF+D+ RL AL E LS +E
Sbjct: 800 EDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDE 852
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G+LT+ G V L+R Q+I++ L EDEIF+KR+ E + + K+RR + K
Sbjct: 383 GYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDEE--RQEHSQKRRRIEEHK 434
>gi|396493104|ref|XP_003843954.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
gi|312220534|emb|CBY00475.1| hypothetical protein LEMA_P016050.1 [Leptosphaeria maculans JN3]
Length = 1096
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/379 (53%), Positives = 258/379 (68%), Gaps = 14/379 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP ++ E+ P++V + IP D PNPNG EFDNLYLDMNGI+H
Sbjct: 1 MGVPAMFRWLSQKYPKIVSTVQEELPKKVGDEIIPVDRCGPNPNGEEFDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPEDK APK E +MM+AIFE DR +VRPRKLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKAAPKTEADMMMAIFEYTDRCVGMVRPRKLLYMAVDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGC-----ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
+++E AEK E A ++ L A + E+ +DSN ITPGTPFM L+ L
Sbjct: 121 SAREAAEKDVERAEFQKVLTAQKASRGEDVTSLEQVVEKTWDSNAITPGTPFMHLLAESL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ + DP WK +KVI+SD++VPGEGEHKIM++IR QR+ P HDPNT H + G DA
Sbjct: 181 QYWCAYKFTTDPSWKDMKVIISDSSVPGEGEHKIMNFIRSQRSMPTHDPNTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECV----GLDAEPNPESV 289
DLIML LATHEP+F ++RE+ + + + C CG+ GH C G +
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFYDSGKDKTCTRCGRKGHIRNNCEFPDDGKKLTEEEAAE 300
Query: 290 ITFGSEVE---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
SE + FI++ ++LREYL E+ P F Y ER+LDDWVFMCFFVGNDFLPH
Sbjct: 301 EWANSEHQLKPFIWLHTNILREYLAVEMDTPKRKFKYDLERSLDDWVFMCFFVGNDFLPH 360
Query: 347 LPSLEIREGAVDRLVNLYK 365
LPSLEIR+ +D L+++++
Sbjct: 361 LPSLEIRDQGIDLLISIWR 379
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Query: 361 VNLYKKTVYKTQEQLRQEENGGGGGRG--VKRSFDDVDESSEEEESNDEVRLWEDGFKDR 418
VNL K+ +++ +NG G V + + +++ +E D ++LWE G+++R
Sbjct: 539 VNLGKRKA----DEIEDADNGTPGRTTPVVPDTPAETPKTNADETPEDTIKLWEPGYEER 594
Query: 419 YYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIA 478
YYE KF V +DIAFR V +Y GLCWVL YY QGC SW WYFP HYAPFA+DF+ +
Sbjct: 595 YYEQKFHVDPNDIAFRNKVARQYAEGLCWVLAYYMQGCPSWTWYFPHHYAPFAADFVGLE 654
Query: 479 EVDTN--FETGT 488
++D FE GT
Sbjct: 655 DMDPRKLFEKGT 666
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 44/52 (84%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF IDLNGKKFAWQGVA+LPF+DE+RL A+A Y +L+ +E
Sbjct: 698 DSPIIDFYPVDFPIDLNGKKFAWQGVAILPFIDEKRLLAAMATKYPELTDDE 749
>gi|294953215|ref|XP_002787652.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239902676|gb|EER19448.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 982
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/392 (53%), Positives = 266/392 (67%), Gaps = 36/392 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--------KIPFDSSKPNPNGMEFDNLY 52
MGVP FFRWL +YP VI VE EV G+ +P D +PNPNG+EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 53 LDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
LD+NGIIHPC HPED P++ED M + I +DRL RIVRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRF+A++E E++ E ++R +++ +G P +KG +DSN ITPGTPF+ +++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEG--REPPSKKGVPWDSNVITPGTPFLDKVA 178
Query: 173 ACLHYYIHDRLNNDPGWK--GIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
LH+YI DR+ NDP W+ G + ILSDA PGEGEHKIMD+IRKQR ++PNT H L
Sbjct: 179 HMLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHML 238
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
GADADLIMLGLATHE +F IIRE + R C +CG++GH EC G D +P+
Sbjct: 239 YGADADLIMLGLATHEISFYIIREVVLKPEERKCYLCGKVGHLPSECTGDDQQPD----- 293
Query: 291 TFGSEVE----------FIFVRLSVLREYLEKELAM----PN----LPFPYSFERALDDW 332
G E E F + L VLREYL ++ PN LPFP+ ER +DD+
Sbjct: 294 -LGDESEEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDF 352
Query: 333 VFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
VFMCFFVGNDFLPHLPSL IR+G++D+++ LY
Sbjct: 353 VFMCFFVGNDFLPHLPSLNIRDGSIDQMICLY 384
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 396 DESSEEEESNDEVRLWEDG---FKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKY 451
D+ E+ D VRL E G +K RYY KF V ++D A F + YV G+CWVL+Y
Sbjct: 543 DKQDLGEKYPDRVRLGEGGEHSWKQRYYTDKFHVTQEDFADFIPRIRKAYVEGICWVLQY 602
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
YYQG SW W++P+HYAPFA+D + + ++ N
Sbjct: 603 YYQGVVSWDWFYPYHYAPFATDLVGCSALECN 634
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVE 715
+S IIDFYPEDF +DLNGKKF WQ V LLPF+ ++RL AL P+ +KL E
Sbjct: 677 NSSIIDFYPEDFALDLNGKKFTWQAVILLPFIIQDRLIAALQPFIDKLDGE 727
>gi|363753664|ref|XP_003647048.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890684|gb|AET40231.1| hypothetical protein Ecym_5486 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/370 (52%), Positives = 266/370 (71%), Gaps = 13/370 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRW+SRKYP +I +E+ PQ V+G K+P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWISRKYPKIISPVLEETPQIVDGVKLPIDYSSPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KPAP+ ED+M++ +FE +R+ + RPR++L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPETEDQMLLEVFEYTNRVLNMARPRRVLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ E AR+ + A G ++ + + +DSN ITPGTPFM +L+A L Y+
Sbjct: 120 SARDAKFANEEKARVLAEREAYGELIDDSVKAKTTWDSNAITPGTPFMDKLAAALRYWTS 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGWK ++VI+SDA VPGEGEHKIM++IR QR ++PNT HC+ G DADLI L
Sbjct: 180 FKLATDPGWKHLQVIISDATVPGEGEHKIMNFIRSQRVDSQYNPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
GLATHEP+F I+RE+ + N+ RP +E + + +E + + +I +E F
Sbjct: 240 GLATHEPHFKILREDVFAQDNRRRP---------RAQEMINM-SEEDKQHLIEQDAEKPF 289
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+++ +SVLREYL EL + L FP+ ERA+DDWVFMCFF GNDFLPHLP L++RE ++D
Sbjct: 290 LWLHVSVLREYLAAELHVQRLSFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRENSID 349
Query: 359 RLVNLYKKTV 368
LV ++K +
Sbjct: 350 ILVEIWKTVL 359
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 22/159 (13%)
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENG--GGGGR-----GVKRSFDDVDES------- 398
R G + +L ++ + K ++ QEE+G R G ++ D ES
Sbjct: 507 RVGNLSAAASLKERILAKKRKLAAQEEDGRESKAARLTTDAGAHQAGSDHQESQLDVPIM 566
Query: 399 SEEE------ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKY 451
S+E +++ EV L+E G+ DRYY++KF P DI + R + Y+ G+ WVL Y
Sbjct: 567 SKETPISGFIDTDKEVHLYEPGYHDRYYQAKFHAPTKDIDSLRSDLARCYIEGIAWVLLY 626
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYQGC SW WY+P+HYAPFA+DF+NI+++ +F+ G QP
Sbjct: 627 YYQGCPSWTWYYPYHYAPFAADFVNISDLVVSFDLG-QP 664
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDF+PE+F ID+NG+K AW+G+ALLPF+DE+RL A+ Y LS EE
Sbjct: 695 DSEIIDFFPEEFAIDMNGEKMAWKGIALLPFIDEQRLRTAVRKQYHLLSDEE 746
>gi|405121347|gb|AFR96116.1| 5'-3' exoribonuclease 2 [Cryptococcus neoformans var. grubii H99]
Length = 1129
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 258/375 (68%), Gaps = 10/375 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ ED P+++ G + P PNPNG E DNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE +PAP+ E+EMMV IF+ +R+ + RPRK+L MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA++E A+K E + A G + E +D+N ITPGTPFM LS L
Sbjct: 121 SRRFRAAQEAADKEEERKEAIKLFEAMGHAVSEETANHKSWDTNAITPGTPFMDLLSISL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y++ +L DPGWK +K+ILSD++VPGEGEHKIMD+IR+QR+ P D NT H + G DA
Sbjct: 181 KYWVSHKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE-FKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESVITF 292
DLIML LATHEP+F ++RE+ F + P C CG++GH C +P V
Sbjct: 241 DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVKDPNVVEVA 300
Query: 293 GSE--VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+E FIF+ ++ LREYL EL +P +PFP+ E A+DDW+FM FFVGNDFLPHLPSL
Sbjct: 301 KTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL 360
Query: 351 EIREGAVDRLVNLYK 365
EIREGA+D L+ +++
Sbjct: 361 EIREGAIDVLLKIWR 375
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D+V+LWE G+++RYYE KF V + F V Y+ GLCWVL+YYYQG +W W++P+
Sbjct: 686 DDVKLWEPGYRERYYEKKFGVKLSEREFIDKVTKSYMEGLCWVLEYYYQGVPAWDWFYPY 745
Query: 466 HYAPFASDFINIAEVDTNFET 486
HYAPFA DF ++ +D FET
Sbjct: 746 HYAPFAQDFRDVGSMDIKFET 766
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+DFYP DF+ID+NGKK AWQGVALLPF+D+ RL AL E LS +E
Sbjct: 799 EDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLLTALKSKEELLSDDE 851
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G+LT+ G V L+R Q+I++ L EDEIF+KR+ E + + K+RR + K
Sbjct: 383 GYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKDDEE--RQEHSQKRRRLEEHK 434
>gi|357126119|ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
Length = 1061
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/370 (60%), Positives = 271/370 (73%), Gaps = 5/370 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++P E+ G K+P D+SKPNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE ++RE+ +G LPP K + DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEEKLREEFEREGRKLPP-KLQSQTCDSNVITPGTEFMAVLSVALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK IKVILSDANVPGEGEHK+M YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFGSEV 296
LATHE +F+I+RE F P Q C +CGQ+GH +C G A E +
Sbjct: 240 ALATHEVHFSILREVVFTPGQQEKCFLCGQVGHLAAKCEGKAKRKAGEFDEKGDAIVPKK 299
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ F+ + LREY+E E MPN PF ER +DD++FMCFFVGNDFLPH+P+LEIREGA
Sbjct: 300 PYQFLNIWTLREYIEYEFRMPNPPFQIDLERIIDDFIFMCFFVGNDFLPHMPTLEIREGA 359
Query: 357 VDRLVNLYKK 366
++ L+ +YKK
Sbjct: 360 INLLMAVYKK 369
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R D+ S EE D+V+L E G+++RYYE KF P+ R V +Y GLCW
Sbjct: 520 REKSDLFNSENPEE--DKVKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCW 577
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + E++ F G+
Sbjct: 578 VMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNITFNLGS 618
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+F+WQG+A LPF+DE RL + L+ EE+
Sbjct: 650 NSPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDESRLLAEIKKVEHTLTPEEA 702
>gi|145347709|ref|XP_001418304.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578533|gb|ABO96597.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 802
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/370 (55%), Positives = 270/370 (72%), Gaps = 16/370 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RW+++KYP ++ VED+P + G+++ +S++ NPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWIAQKYPKIVADVVEDEPVDALGRRVELNSAEANPNGIEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP E+E+ IF+ IDRLF ++RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEEEVFECIFDYIDRLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E EK E ++REKL+ +G + P++E G FDSN ITPGTPFM RLS L YY+H
Sbjct: 121 SAQEAREKAEEEEKLREKLIREGVKVQPKQESGV-FDSNVITPGTPFMGRLSEALKYYVH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
D+LNNDPGW+GI+VI SDA+VPGEGEHK M YIR+QR P +PNT+H + G DADLIML
Sbjct: 180 DKLNNDPGWRGIEVIFSDASVPGEGEHKAMHYIRQQRGLPGANPNTRHVVYGLDADLIML 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
LATHEP+F I+RE V + +E + +GL E + V + +
Sbjct: 240 ALATHEPHFWILRE----------IVFQKKDNEAPQTLGLGTEETKKKVAI--ARKPYQL 287
Query: 301 VRLSVLREYLEKELAMPNLPFPYSF--ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+ +SVLREYL ++ P P P+ ER DD++FMCFFVGNDFLPH P+LEIREGA+D
Sbjct: 288 LSVSVLREYLALDM-RPVAPTPFKLDPERMFDDFIFMCFFVGNDFLPHSPTLEIREGAID 346
Query: 359 RLVNLYKKTV 368
L+ LY+ +
Sbjct: 347 LLMTLYRNCL 356
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP---KDDIAFRLMVGHEYV 442
RG + + D E EE D +RL E G+KDRYYE+K +D+I +++ EYV
Sbjct: 484 RGKRAAEATADAMGEREEETDNIRLGESGWKDRYYEAKMQATPQTRDEIIRGMVI--EYV 541
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GL WV +YY++GC SW W++P+HYAPFASD +++ + T+F+ G
Sbjct: 542 RGLIWVCRYYFEGCCSWSWFYPYHYAPFASDLYDLSTISTDFDLG 586
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 659 GQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSV 714
FAP +DSPIIDFYPEDF +D+NGK+F WQ VALLP++D RL + L+
Sbjct: 609 AAFAPLMSDKDSPIIDFYPEDFALDMNGKRFTWQAVALLPWIDANRLLEQTEMLEYTLTA 668
Query: 715 EE 716
EE
Sbjct: 669 EE 670
>gi|207341239|gb|EDZ69347.1| YOR048Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1006
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/370 (52%), Positives = 265/370 (71%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G +P D S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEQPQIVDGVILPLDYSAPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L MA+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R RE++ G I+ +DSN ITPGTPFM +L+A L Y
Sbjct: 120 SARDAQIENEAREEIMRQREEV---GEIIDDAVRNKKTWDSNAITPGTPFMDKLAAALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DAD
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADF 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
LGL THEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 NFLGLTTHEPHFKILREDVFAQDNRKR---------NNLKDTINM-TEEEKQFLQKQNSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ ++VLREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 QPFLWLHINVLREYLSAELWVPGLPFTFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYK 365
++D L++++K
Sbjct: 347 SIDILLDIWK 356
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ +RYY +KF V P+D R + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEFVKLFEPGYHERYYTAKFHVTPQDIEQLRKDMVKCYIEGVAWVLMYYYQGCASWNW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAP A+DF + ++ FE GT
Sbjct: 652 FYPYHYAPLATDFHGFSHLEIKFEEGT 678
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+D++RL A+ Y LS E
Sbjct: 710 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDQDRLLTAVRAQYPLLSDAE 761
>gi|50293593|ref|XP_449208.1| hypothetical protein [Candida glabrata CBS 138]
gi|74608566|sp|Q6FKN6.3|XRN2_CANGA RecName: Full=5'-3' exoribonuclease 2
gi|49528521|emb|CAG62182.1| unnamed protein product [Candida glabrata]
Length = 1018
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 267/373 (71%), Gaps = 19/373 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E+ Q V+G +P D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEPQQLVDGVALPIDYAGPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ ED+M++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEDDMLLAVFEYTNRVLNMARPRKVLVIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E E+ R +E+L G I+ + +DSN ITPGTPFM +L+ L Y
Sbjct: 120 SARDAEIENEAREEIMRQKEQL---GQIIDDSVKNKKTWDSNAITPGTPFMDKLAIALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++VI+SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVIISDATVPGEGEHKIMNFIRSQRADPEYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I LGLATHEP+F I+RE+ + N+ R + +K+ + + E + + SE
Sbjct: 237 IFLGLATHEPHFKILREDVFAQDNRKR---------NNVKDTIDMTDE-EKDLIRKQDSE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ +SVLREYL EL P LPFP+ ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 KPFLWLHISVLREYLSAELWTPKLPFPFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYKKTV 368
++D L++++K +
Sbjct: 347 SIDILLDIWKSIL 359
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++ V+L+E G+ DRYY KF + + I A + Y+ G+ WVL YYYQGC SW W
Sbjct: 592 DTDEAVKLFEPGYHDRYYIEKFHIEPNQIPALSKHMVKCYIEGVSWVLMYYYQGCASWTW 651
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAP A DF++ ++D FE G
Sbjct: 652 YYPYHYAPLAEDFVDFHDLDIKFELG 677
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ +DS IIDFYP +F ID+NGKK +WQG+ALLPF+DE RL A Y+ LS +E
Sbjct: 706 MSSEDSEIIDFYPTEFPIDMNGKKMSWQGIALLPFIDETRLLTATRNQYKFLSEDE 761
>gi|294899194|ref|XP_002776531.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239883563|gb|EER08347.1| 5'-3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 421
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/392 (53%), Positives = 266/392 (67%), Gaps = 36/392 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ--------KIPFDSSKPNPNGMEFDNLY 52
MGVP FFRWL +YP VI VE EV G+ +P D +PNPNG+EFDNLY
Sbjct: 1 MGVPTFFRWLCTRYPKVIKDAVEKVCIEVPGEGGDGANTYDVPVDFEEPNPNGIEFDNLY 60
Query: 53 LDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
LD+NGIIHPC HPED P++ED M + I +DRL RIVRPRKLLY+AIDGVAPRAKMN
Sbjct: 61 LDLNGIIHPCCHPEDGMTPENEDVMFLNIMRYVDRLVRIVRPRKLLYVAIDGVAPRAKMN 120
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRF+A++E E++ E ++R +++ +G P +KG +DSN ITPGTPF+ +++
Sbjct: 121 QQRARRFKAAQEATEQMKEEEKLRRQMVKEG--REPPSKKGVPWDSNVITPGTPFLDKVA 178
Query: 173 ACLHYYIHDRLNNDPGWK--GIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
LH+YI DR+ NDP W+ G + ILSDA PGEGEHKIMD+IRKQR ++PNT H L
Sbjct: 179 HMLHWYISDRMTNDPLWQLLGFRCILSDAGSPGEGEHKIMDFIRKQRMMEGYNPNTTHML 238
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
GADADLIMLGLATHE +F IIRE + R C +CG++GH EC G D +P+
Sbjct: 239 YGADADLIMLGLATHEISFYIIREVVLKPEERKCYLCGKVGHLPSECTGDDQQPD----- 293
Query: 291 TFGSEVE----------FIFVRLSVLREYLEKELAM----PN----LPFPYSFERALDDW 332
G E E F + L VLREYL ++ PN LPFP+ ER +DD+
Sbjct: 294 -LGDESEEDEDMLEMKPFQIISLPVLREYLVEQFTTAFCPPNQKCILPFPFDVERVIDDF 352
Query: 333 VFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
VFMCFFVGNDFLPHLPSL IR+G++D+++ LY
Sbjct: 353 VFMCFFVGNDFLPHLPSLNIRDGSIDQMICLY 384
>gi|50310793|ref|XP_455419.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605300|sp|Q6CKX0.3|XRN2_KLULA RecName: Full=5'-3' exoribonuclease 2
gi|49644555|emb|CAG98127.1| KLLA0F07469p [Kluyveromyces lactis]
Length = 992
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 265/382 (69%), Gaps = 23/382 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E+ P +G ++P D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEEYPVIEDGVQLPLDYSSANPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++++ E +V R RE G + + +DSN ITPGTPFM +L+ L Y
Sbjct: 120 SARDAKLQNEAREQVLREREDY---GETIDENVKSKKTWDSNAITPGTPFMDKLATALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK +++I+SDA VPGEGEHKIM++IR QRA ++PNT HC+ G DADL
Sbjct: 177 WTSFKLATDPGWKNLQIIISDATVPGEGEHKIMNFIRSQRADTQYNPNTTHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPN----QARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
I LGLATHEP+F I+RE+ N + +P D+ E ++ + D
Sbjct: 237 IFLGLATHEPHFKILREDVFANNNYKKPKPQDMINLSEEEKQQLIQQD------------ 284
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
SE F+++ +SVLREYL ELA+P+L F + FERA+DDWVFMCFF GNDFLPHLP L++R
Sbjct: 285 SEKPFLWLHISVLREYLSAELAIPHLSFQFDFERAIDDWVFMCFFCGNDFLPHLPCLDVR 344
Query: 354 EGAVDRLVNLYKKTVYKTQEQL 375
E ++D LV+++K + KT+ L
Sbjct: 345 ENSIDILVDIWKTVLPKTKTYL 366
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 10/101 (9%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLC 446
VK F D DES VRL+E G+ DRYY+ KF VP DI A + V YV G+
Sbjct: 577 VKSGFIDTDES---------VRLYEPGYHDRYYQHKFHVPAKDIPALQKDVIRCYVEGIS 627
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WVL YYYQGC SW WY+P+HYAPFA DF NI +D +F+ G
Sbjct: 628 WVLLYYYQGCASWTWYYPYHYAPFAQDFKNIKNLDIHFDLG 668
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F +D+NGKK AWQG+ALLPF+DE RL K + Y KLS E
Sbjct: 701 NSEIIDFYPEEFPVDMNGKKMAWQGIALLPFIDETRLLKTVREQYSKLSDSE 752
>gi|320584179|gb|EFW98390.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 967
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/370 (53%), Positives = 265/370 (71%), Gaps = 12/370 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I +E++P V + P S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEPIVVGDVEQPVQYSNPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ E EMMV IF DR+ + RPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPPPETEAEMMVEIFRYTDRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ A E+ R I+E+ + I K K S +DSN ITPGTPFM L+ L Y++
Sbjct: 120 SARDAALAQEELERQIQEREMRGEEIDLAIKGKKS-WDSNSITPGTPFMDILARSLRYWV 178
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L NDPGW ++VI+SDA VPGEGEHKIM++IR QR+ P+++PNT HC+ G DADLI
Sbjct: 179 AYKLANDPGWASLQVIISDATVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIF 238
Query: 240 LGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
LGLATHEP+F ++RE+ F +QA Q ++ + V +D E + ++ + F
Sbjct: 239 LGLATHEPHFKVLREDVFAKDQA-------QRQLKLADQVNMD-EATRQRLLAADQKKPF 290
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+++ +S+LREYLE EL +P L F + ERA+DDWVFMCFFVGNDFLPHLPSL++R+ +D
Sbjct: 291 LWLHVSILREYLEVELNIPRLSFNFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDNGID 350
Query: 359 RLVNLYKKTV 368
LV+++K+ +
Sbjct: 351 ILVDIWKRVL 360
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 386 RGVKRSFDDVDESSEEE--ESNDEVRLWEDGFKDRYYESKFDVP-KDDI-AFRLMVGHEY 441
R +F+ E S+ E ++ D +RLWE G+K RYY+ KF+ ++I R + Y
Sbjct: 523 RSASAAFNSDSEQSDAEVIDTTDSIRLWEPGYKTRYYQQKFETTDAEEIEKIRKDMVRCY 582
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V G+ W L YY+QGC SW WY+P+HYAPFA+DF N++++ F+ GT
Sbjct: 583 VEGISWALLYYFQGCPSWNWYYPYHYAPFAADFTNLSDIKVEFKQGT 629
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S IIDFYP DFKID+NG K AWQG+ LLPF+DE RL K + Y +L+ E E
Sbjct: 662 SEIIDFYPTDFKIDMNGAKMAWQGICLLPFIDETRLLKTVREKYSELTEYEIE 714
>gi|19115067|ref|NP_594155.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe 972h-]
gi|729332|sp|P40848.1|XRN2_SCHPO RecName: Full=5'-3' exoribonuclease 2; AltName: Full=Protein dhp1
gi|496393|dbj|BAA04601.1| Dhp1 protein [Schizosaccharomyces pombe]
gi|1177359|emb|CAA93235.1| 5'-3' exoribonuclease Dhp1 [Schizosaccharomyces pombe]
Length = 991
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/372 (55%), Positives = 267/372 (71%), Gaps = 14/372 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPA FR LSRK+ VI +E +++ +G +I D S PNPNG+E DNLYLDMNGI+
Sbjct: 1 MGVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAP+ EDEMMVA+FE DR+ +VRPR+LL++AIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPETEDEMMVAVFEYTDRILAMVRPRQLLFIAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R+S+E A K E+ E+ G + K +DSNCITPGTPFM L+ L YYI
Sbjct: 121 RSSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFMDTLAKSLRYYI 180
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++LN+DP W+ ++ ILSDA+VPGEGEHKIM++IR QR +P++DPNT H + G DADLIM
Sbjct: 181 INKLNSDPCWRNVRFILSDASVPGEGEHKIMEFIRSQRVKPEYDPNTHHVVYGLDADLIM 240
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK---ECVGLDAEPNPESVITFGSEV 296
LGLATHEP+F ++RE DV Q G K E +G+ + +
Sbjct: 241 LGLATHEPHFRVLRE----------DVFFQQGSTKKTKEERLGIKRLDDVSETNKVPVKK 290
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
FI++ +S+LREYLE EL +PNLPFP+ ERA+DDWVF FFVGNDFLPHLPSL+IR+GA
Sbjct: 291 PFIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGA 350
Query: 357 VDRLVNLYKKTV 368
V+RL +++ ++
Sbjct: 351 VERLTEIWRASL 362
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGL 445
G KR D S+EE E+ D VRL+E G+++RYYE KF + P + R V H YV GL
Sbjct: 566 GQKRKAPD---STEENENTDTVRLYEPGYRERYYEQKFHISPDEPEKIREAVKH-YVHGL 621
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
CWVL YYYQGC SW WY+P+HYAPFA+DF ++A +D FE
Sbjct: 622 CWVLLYYYQGCPSWTWYYPYHYAPFAADFKDLASIDVKFE 661
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++S IIDFYPE+F IDLNGKKF WQGVALLPF+DE RL A++ Y +L+ EES+
Sbjct: 695 ENSEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESK 749
Score = 40.4 bits (93), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
G+LT G V L R ++I+ +G ED+IFK+ +Q E + ++R++R+ ++S
Sbjct: 367 GYLTLDGSVNLARAEVILSAVGNQEDDIFKRLKQQED--RRNENYRRRQQRESNQESES 423
>gi|222619617|gb|EEE55749.1| hypothetical protein OsJ_04252 [Oryza sativa Japonica Group]
Length = 1042
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 223/392 (56%), Positives = 281/392 (71%), Gaps = 17/392 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V VE++ E+ G K+P D+SKPNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLAEKYPMVVVDVVEEEAVEIEGVKVPVDTSKPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+P E+ +F+ IDRLF +VRPRKL+YMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPSPTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K+ A+ AE R+RE+ +G LPP K++ DSN ITPGT FMA LS L YYIH
Sbjct: 121 AAKDAADAAAEEERLREEFEREGRKLPP-KQQSQTCDSNVITPGTEFMAVLSIALQYYIH 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGWK +KVILSDANVPGEGEHKIM YIR QR P +PNT+HCL G DADLIML
Sbjct: 180 LRLNYDPGWKQVKVILSDANVPGEGEHKIMSYIRGQRNLPGFNPNTRHCLYGLDADLIML 239
Query: 241 GLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGL------DAEPNPESVITFG 293
LATHE +F+I+RE + P Q C +CGQ+GH C G + + E+++
Sbjct: 240 ALATHEVHFSILREVVYTPGQQDKCFLCGQVGHLAANCEGKVKRKAGEFDEKGEAIVP-- 297
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ + F+ + LREYLE E M N PFP FER +DD++FMCFFVGNDFLPH+P+LEIR
Sbjct: 298 -KKPYQFLNIWTLREYLEYEFRMQNPPFPIDFERIVDDFIFMCFFVGNDFLPHMPTLEIR 356
Query: 354 EGAVDRL------VNLYKKTVYKTQEQLRQEE 379
E ++++ V Y+ +++ + +L Q +
Sbjct: 357 EPDLNKVEHFIQAVGSYEDKIFQKRARLHQRQ 388
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 4/101 (3%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCW 447
R DV S EE D+++L E G+++RYYE KF P R V +Y GLCW
Sbjct: 494 REKSDVFNSENPEE--DKIKLGEPGWRERYYEEKFGARTPGQIEEIRRDVVLKYTEGLCW 551
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
V+ YYY+G SW+W++P+HYAPFASD + +++ FE G+
Sbjct: 552 VMHYYYEGVCSWQWFYPYHYAPFASDLSGLGQLNITFELGS 592
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGK+++WQG+A LPF+DE RL + L+ EE+
Sbjct: 624 NSPIIDFYPTDFEVDMNGKRYSWQGIAKLPFIDEARLLAEIKKVEHTLTPEEA 676
>gi|255717294|ref|XP_002554928.1| KLTH0F17116p [Lachancea thermotolerans]
gi|238936311|emb|CAR24491.1| KLTH0F17116p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 260/365 (71%), Gaps = 9/365 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +ED PQ +G +P D + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEDTPQIEDGVALPIDYAGPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE++P P+ EDEM++A+FE +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTNRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ + E R+ + G I+ +DSN ITPGTPFM +L+A L Y+
Sbjct: 120 SARDAQIQNEERERVLLEKEDMGEIIDDSVRNKKTWDSNAITPGTPFMDKLAAALRYWTS 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGWK ++VI+SDA VPGEGEHKIM+++R QRA P ++PNT HC+ G DADLI L
Sbjct: 180 FKLATDPGWKNLQVIISDATVPGEGEHKIMNFVRSQRADPQYNPNTSHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEP+F I+RE+ R +++ + + +E + +++ S+ F++
Sbjct: 240 GLATHEPHFKILREDVFAQDNR-------RRQRVQDTINM-SEEDKAALLQQDSQKPFLW 291
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ +SVLREYL EL +P L F + ERA+DDWVFMCFF GNDFLPHLPSL++RE ++D L
Sbjct: 292 LHISVLREYLAVELFVPRLSFEFDTERAVDDWVFMCFFCGNDFLPHLPSLDVRENSIDIL 351
Query: 361 VNLYK 365
V ++K
Sbjct: 352 VEIWK 356
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
++++EV+L+E G+ DRYY +KF + + DI R V YV G+ WVL YYYQGC SW W
Sbjct: 586 DTDEEVKLFEPGYHDRYYTAKFHIDERDIDQLRKEVVRSYVEGVSWVLLYYYQGCASWNW 645
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFASDF +I ++ FE G
Sbjct: 646 YYPYHYAPFASDFKDIKDLKITFEKG 671
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F ID+NGKK +WQG+ALLPF+DE+RL + + YE+LS EE
Sbjct: 704 DSEIIDFYPEEFPIDMNGKKMSWQGIALLPFIDEKRLLRVVRDQYERLSPEE 755
>gi|299747213|ref|XP_001836883.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
gi|298407417|gb|EAU84500.2| 5'-3' exoribonuclease 2 [Coprinopsis cinerea okayama7#130]
Length = 1156
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/375 (54%), Positives = 268/375 (71%), Gaps = 22/375 (5%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVED---KPQEVNGQK--IPFDSSKPNPNGMEFDNLYLDMN 56
GVPA FRWLS+KYP +I+ E+ K + N Q+ IP + ++PNPNG+EFDNLYLDMN
Sbjct: 18 GVPALFRWLSKKYPKIILPVEEEDDIKVPDENDQEVTIPVNMAQPNPNGVEFDNLYLDMN 77
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI PAP+ E++MMV +F+ +R+ +VRPRKLL+MAIDGVAPRAKMNQQRS
Sbjct: 78 GI----------PAPETEEDMMVEVFKYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRS 127
Query: 117 RRFRASKETAEKIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RRFR+++E EK E AR L A G + E++ +DSN ITPGTPFM L+A
Sbjct: 128 RRFRSAQEAKEK--EEARKEALALWEAMGKKVSDEEKTKQAWDSNAITPGTPFMDLLAAS 185
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N DPGWK I+VI+SDA+V GEGEHKIMDYIR+QR+ P +DPNT+H + G D
Sbjct: 186 LRYWVVQKMNTDPGWKNIQVIISDASVAGEGEHKIMDYIRRQRSNPGYDPNTKHVIYGLD 245
Query: 235 ADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
ADLIML LATHEP+F ++RE+ F +++ C +CGQ GH +C G AE E
Sbjct: 246 ADLIMLALATHEPHFRVLREDVFAQDKSTACRICGQEGHYAAQCTGTKAE--IEKKPPPP 303
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ FIF+ ++VLREYLE EL +P+ PF + E+A+DDWV + FFVGNDFLPHLPSLEIR
Sbjct: 304 EKKPFIFLDVAVLREYLEVELDVPSSPFRFDLEKAIDDWVLLIFFVGNDFLPHLPSLEIR 363
Query: 354 EGAVDRLVNLYKKTV 368
EGA+D L+ ++K+ +
Sbjct: 364 EGAIDTLLKIWKQEL 378
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E D V+LWE G+K+RYY+ KF V DI FR V YV GL WVL+YYYQG SW+WY
Sbjct: 638 EQEDTVKLWEPGYKERYYKQKFGVEPHDIEFRHKVAEAYVQGLAWVLQYYYQGTPSWQWY 697
Query: 463 FPFHYAPFASDFINIAEVDTNFETG 487
+P+H+APFA+DF+++ ++D F G
Sbjct: 698 YPYHFAPFAADFVDVEKMDIKFNLG 722
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP F+ID+NGKK AWQGVALLPF+DE RL A+A Y L+ +E
Sbjct: 754 EDSPIIDFYPPTFEIDMNGKKMAWQGVALLPFIDETRLLDAMALEYPNLTEDE 806
>gi|412993025|emb|CCO16558.1| predicted protein [Bathycoccus prasinos]
Length = 1062
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 267/376 (71%), Gaps = 23/376 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWLS KYP +I VED+ ++NG K+ DSSK NPNG EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLSVKYPKIIADVVEDEVVDINGNKVFVDSSKSNPNGQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P P E+E+ + IFE I+RLF ++RPRK+LYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPPPTTEEEVFLNIFEYIERLFLMIRPRKVLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++E EK E ++REKL DG +PP+ E G FDSN ITPGTPFM RL+ L +Y+
Sbjct: 121 AAQEAEEKKIEEEKLREKLRRDGIEVPPKIESGV-FDSNVITPGTPFMGRLAEALKFYVR 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPD---HDPNTQHCLCGADADL 237
+ N D GWK IKVI+SDA+VPGEGEHK M YIR+QRA + +DPNT+H + G DADL
Sbjct: 180 KKQNTDKGWKNIKVIVSDASVPGEGEHKAMHYIRQQRACANGGGYDPNTRHVVYGLDADL 239
Query: 238 IMLGLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IML LATHEP+F I+RE + KPN++ G + K+ + + +P
Sbjct: 240 IMLALATHEPHFHILREVVFQQKPNESAQNGGAGAIDKNAKQ-IAIARKP---------- 288
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLP--FPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F + +++LREYL +L+ LP F ER DD+VFMCFFVGNDFLPH P+LEI
Sbjct: 289 ---FQLLSVTILREYLALDLSPHVLPQTFTIDRERLFDDFVFMCFFVGNDFLPHSPTLEI 345
Query: 353 REGAVDRLVNLYKKTV 368
REGA+D L+ +YK+ +
Sbjct: 346 REGAIDLLMTIYKQEL 361
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKF---DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
E+E D +RL E G+K+RYY++K D+ R MV E++ GL WV KYYY+GC
Sbjct: 646 EDEMEADNIRLGEIGWKERYYDAKMGSHDLNSRRKVVRGMV-EEFIRGLLWVCKYYYEGC 704
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++P+HYAPFA+D +++ + T FE G
Sbjct: 705 CSWGWFYPYHYAPFATDMVDLELISTEFELG 735
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 643 MKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+ A+ P+F P +DSPIIDFYP+ F +D+NGK+FAWQ VALLP++D +RL
Sbjct: 748 LPAASAHALPPAFYP--LMTDEDSPIIDFYPKHFDLDMNGKRFAWQAVALLPWIDADRL 804
>gi|298713655|emb|CBJ33698.1| putative 5\'-3\' exoribonuclease (XRN3) [Ectocarpus siliculosus]
Length = 708
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/445 (50%), Positives = 282/445 (63%), Gaps = 38/445 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWLS KYP ++V +ED V G +IP D + NPNG+EFDNLY+DMNGIIH
Sbjct: 1 MGVPAFYRWLSEKYPKIVVDMLEDHAARVEGTEIPLDLTAENPNGIEFDNLYIDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPEDKP P+ E+EM I + IDRLF VRPR+LLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDKPPPESEEEMYKNIMDYIDRLFSAVRPRRLLYLAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++E E + R+ + G +PP+ + +DSN ITPGT FM +LS L +Y+
Sbjct: 121 SAQEAEEAAELMEETRQAMKEMGVKVPPKAKPA--WDSNIITPGTEFMHKLSRYLRFYVQ 178
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
DR+N D W+ IKVILSDA+ PGEGEHKIMD++R+QR QP +DPN H L G DADLIML
Sbjct: 179 DRVNRDKAWQNIKVILSDASEPGEGEHKIMDFVRRQRTQPGYDPNQHHILHGLDADLIML 238
Query: 241 GLATHEPNFTIIREE--FKPNQARPCD-----------VCGQMGHEMK--ECVGLDAEPN 285
GLATHE +FTI+RE+ F Q + +G + K E D + +
Sbjct: 239 GLATHERSFTILREQVLFGRQQKEASERKAAAMNAARDALAGVGQKAKRGEHGEHDGDVS 298
Query: 286 PESVITFGSEVEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGN 341
P + ++L LREYLE KEL P +PF Y FER +DD+VF+CFFVGN
Sbjct: 299 PHKPLQ--------MLQLWTLREYLENEFKELEAPGRVPFGYDFERVVDDFVFLCFFVGN 350
Query: 342 DFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEE 401
DFLPHLPSL IR+GA+D L N+YK+ + + L GGR + D + SE
Sbjct: 351 DFLPHLPSLGIRDGALDYLFNVYKRVISSLGDYL-----TASGGRVNLKQVDVI--MSEV 403
Query: 402 EESNDEV--RLWEDGFKDRYYESKF 424
E DEV R + KD+ S F
Sbjct: 404 GEIEDEVFKRRKQAEVKDQAKRSSF 428
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 5/75 (6%)
Query: 405 NDEVRLWEDGFKDRYYESKFDVPKDDI---AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
ND VRLWEDG+KDRYY K + +DI R + YV GLCWV+ YYYQGC SW W
Sbjct: 633 NDTVRLWEDGWKDRYYHDKCKL--EDIEGGGGRERLFQTYVEGLCWVMLYYYQGCPSWTW 690
Query: 462 YFPFHYAPFASDFIN 476
YFPFHYAPFASD IN
Sbjct: 691 YFPFHYAPFASDLIN 705
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Query: 582 LFSRMLTYPG-FLTDSGD-VKLERVQLIMQDLGMMEDEIFKKRQQTET 627
++ R+++ G +LT SG V L++V +IM ++G +EDE+FK+R+Q E
Sbjct: 372 VYKRVISSLGDYLTASGGRVNLKQVDVIMSEVGEIEDEVFKRRKQAEV 419
>gi|378727060|gb|EHY53519.1| 5'-3' exoribonculease Dhp1 [Exophiala dermatitidis NIH/UT8656]
Length = 1075
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 265/377 (70%), Gaps = 10/377 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWL++KYP +I VE++P E++G + P D++KPNPNG E NLYLD NGI+H
Sbjct: 1 MGVPALFRWLTKKYPKIISPVVEEQPYEIDGVQYPVDTTKPNPNGEEMHNLYLDFNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ---RSR 117
PC+HPE+KP P +E EMM+ IF+ DR+ +VRPR+LL +AIDGVAPRAKMNQQ R R
Sbjct: 61 PCSHPENKPPPANESEMMMEIFKYTDRVVNMVRPRRLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEK-GSHFDSNCITPGTPFMARLSACLH 176
R +KE EK AE + + D + E+E +DSN ITPGTPFM L+ +
Sbjct: 121 AARDAKEADEKKAEFQTLLRQQQQDRDDVSDEEEVIKKTWDSNVITPGTPFMFILAQSIR 180
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ +LN DP W +KVI+SDA+VPGEGEHKIM +IR QR+ P++DPNT+H + G DAD
Sbjct: 181 YWVQWKLNTDPAWAELKVIISDASVPGEGEHKIMQFIRSQRSDPEYDPNTRHVMYGLDAD 240
Query: 237 LIMLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
LIMLG+ATHEP+F ++RE+ + +A+ C +CGQ GH + C G +A+ G+
Sbjct: 241 LIMLGIATHEPHFRVLREDVFTRDAKAKTCKLCGQQGHYAENCRG-NAKVKAGEFDEKGT 299
Query: 295 EVE---FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
E FI++ + VLREYL E+ +P PF + ERALDDWVFMCFFVGNDFLPHLPSL+
Sbjct: 300 TEELKPFIWLHVPVLREYLAAEMFVPGQPFRFDLERALDDWVFMCFFVGNDFLPHLPSLD 359
Query: 352 IREGAVDRLVNLYKKTV 368
I E +D+L+ +++ +
Sbjct: 360 IHEDGIDKLIAIWRDNL 376
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 76/126 (60%)
Query: 363 LYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYES 422
L K+ +EQ ++G G D +E + D VRLWE G+ DRYYE
Sbjct: 542 LGKRKAALMEEQDAASDSGTPGRNTPLTKTDTNEEPPPVDPDLDTVRLWEPGYADRYYEQ 601
Query: 423 KFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
KF V +DI FR V YV GLCWVL YY+QGC SW WY+P+HYAPFA+DF++I +++
Sbjct: 602 KFHVSPNDIEFRHKVARAYVEGLCWVLLYYFQGCPSWTWYYPYHYAPFAADFVDIDKMEV 661
Query: 483 NFETGT 488
F+ GT
Sbjct: 662 KFDKGT 667
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 645 MAAQSTKA--PSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
+ A S A P+F P +DS I+DFYPEDF +DLNGKK +W+ V LLPF+DE+RL
Sbjct: 679 LPASSNHAIPPAFHP--LMTDEDSEIVDFYPEDFDLDLNGKKQSWKAVVLLPFIDEKRLL 736
Query: 703 KALAPYYEKLSVEE 716
KA+ Y LS +E
Sbjct: 737 KAMGTKYPLLSDDE 750
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQ 624
G++T G+V L R Q+I+Q L ED IFK+R++
Sbjct: 381 GYVTCDGNVNLARAQIILQGLAKQEDAIFKRRKE 414
>gi|403218305|emb|CCK72796.1| hypothetical protein KNAG_0L01770 [Kazachstania naganishii CBS
8797]
Length = 1003
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/373 (52%), Positives = 256/373 (68%), Gaps = 19/373 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLSRKYP +I +E++PQ V+G ++P D S N NG E DNLYLDMNGI+H
Sbjct: 1 MGVPSFFRWLSRKYPKIISPVLEERPQIVDGVELPIDYSTENANG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KP P+ EDEM++A+FE R+ + RPRK+L MA+DGVAPRAKMNQQR+RR
Sbjct: 60 PCSHPENKPPPETEDEMLLAVFEYTHRVLNMARPRKVLVMAVDGVAPRAKMNQQRARRLG 119
Query: 121 ASKETA---EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
+K+ EK E R RE G ++ + +DSN ITPGTPFM +L+ L Y
Sbjct: 120 LAKDAELQNEKKEEELRKREHY---GEVIDDSVKAKKTWDSNAITPGTPFMDKLALALRY 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +L DPGWK ++V++SDA VPGEGEHKIM++IR QRA P+++PNT HC+ G DADL
Sbjct: 177 WTAFKLATDPGWKNLQVVISDATVPGEGEHKIMNFIRSQRADPEYNPNTSHCIYGLDADL 236
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I LGLATHEP+F I+RE DV Q K + + E I + E
Sbjct: 237 IFLGLATHEPHFKILRE----------DVFAQEYKSSKRDIDANNMTEEERQILLKRDAE 286
Query: 298 --FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F+++ + +LREYL EL +P LPF + ERA+DDWVFMCFF GNDFLPHLP L++RE
Sbjct: 287 KPFLWLHIGILREYLAAELFVPRLPFAFDLERAIDDWVFMCFFCGNDFLPHLPCLDVREN 346
Query: 356 AVDRLVNLYKKTV 368
++D L++++KK +
Sbjct: 347 SIDILLDIWKKVL 359
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+++D VRL E G+K+RYY KF++ KD I R + Y+ G+ WVL YYYQGC SW W
Sbjct: 589 DTDDTVRLHESGYKERYYTGKFNISKDQIEPLRKDMVKSYIEGVSWVLLYYYQGCPSWNW 648
Query: 462 YFPFHYAPFASDFINIAEVDTNFETG 487
Y+P+HYAPFA+DF +I ++ F+ G
Sbjct: 649 YYPYHYAPFAADFFDINDIKVEFKQG 674
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 643 MKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
+ A+ T P F P + DSPIIDFYP++FKID+NGKK +WQG+ALLPF+DE+RL
Sbjct: 687 LPAASGHTLPPIFRP--LMSDVDSPIIDFYPQEFKIDMNGKKMSWQGIALLPFIDEKRLL 744
Query: 703 KALAPYYEKLSVEE 716
+ + Y KLS EE
Sbjct: 745 ETVRAQYPKLSEEE 758
>gi|255941486|ref|XP_002561512.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586135|emb|CAP93883.1| Pc16g12130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/378 (52%), Positives = 257/378 (67%), Gaps = 32/378 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS KYP ++ +E++PQ V+G++IP D ++PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSNKYPKIVSPVIEEQPQVVDGEEIPIDITRPNPNGEEQDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPE KP P DE EMM+ I++ DR+ +VRPRKLL +AIDGVAPRAKMNQQR+RRFR
Sbjct: 61 PCTHPEGKPPPADEQEMMMEIYKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRARRFR 120
Query: 121 ASKETAEKIAEVARIREKLLAD------GCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
+++E E + + K+LA G L E+ +DSN ITPGTPFM L+A
Sbjct: 121 SAQEAKENDQKKEEL-HKMLAQQHATKTGEQLIREEVVQKTWDSNVITPGTPFMDILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+I +LN DPGW+ +K+I+SDA VPGEGEHKIM++ D
Sbjct: 180 LRYWIAYKLNTDPGWENLKIIISDATVPGEGEHKIMNF---------------------D 218
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE--SVI 290
ADLIMLGL THEP F ++RE+ +RP C +CGQ GH+ +EC+G E + E
Sbjct: 219 ADLIMLGLGTHEPYFRVLREDVFAQDSRPRGCRLCGQNGHKAEECLGRPKEKSGEFDEKQ 278
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
FI++ ++VLREYL EL +P PFP+ ERALDDWVFMCFFVGNDFLPHLPSL
Sbjct: 279 HAAPLKPFIWLHVAVLREYLAVELRVPQQPFPFDLERALDDWVFMCFFVGNDFLPHLPSL 338
Query: 351 EIREGAVDRLVNLYKKTV 368
+IRE +D L+ +++ ++
Sbjct: 339 DIRENGIDTLIAIWRDSL 356
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 68/94 (72%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
++ ++E D V+LWE G+ DRYYE KF V D+ FR V EY +GLCWVL+YY+Q
Sbjct: 557 AEKPKQDEPQEDTVKLWEPGYADRYYEQKFGVDPKDLEFRHQVAREYAIGLCWVLRYYFQ 616
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
GC SW WY+P HYAPFA+DF++IA++D FE GT
Sbjct: 617 GCPSWTWYYPRHYAPFAADFVDIADMDVKFEKGT 650
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPEDF +DLNGKKFAWQGV LLPF+DE RL A+A Y L+ +E
Sbjct: 682 DSEIIDFYPEDFPLDLNGKKFAWQGVILLPFIDETRLLNAMAKVYPLLTEDE 733
>gi|255720663|ref|XP_002545266.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135755|gb|EER35308.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 981
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/374 (49%), Positives = 258/374 (68%), Gaps = 17/374 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I +E++ E+ G + PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEEEDHEIGGARY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K AP+ EDEM + IF+ DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKAPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETAEKIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
A+++ K ++ ++E+ + G ++ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 AAQDAKLKSHQLEIEVKEREMR-GEVIDDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L NDPGW ++VI+SDA VPGEGEHK+M++IR QR+ P +DPNT+HC+ G DADLI
Sbjct: 175 AYKLANDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ Q + + Q+ + V E F+
Sbjct: 235 LGLATHEPHFRVLREDVFAKQEKKFTIRDQIAEATSDAVKTKTE----------DRKPFL 284
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ +SVLREYL+ EL P +PFP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 285 WLHVSVLREYLQVELYAPRMPFPFQLERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDT 344
Query: 360 LVNLYKKTVYKTQE 373
LV +K+++ + ++
Sbjct: 345 LVQCWKRSLGRLKD 358
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 69/108 (63%), Gaps = 11/108 (10%)
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRL---MVGHEYVLGL 445
KR DVDE E + D+++L+E G+ RYYE KF D+ ++ +V H YV G+
Sbjct: 528 KRKHKDVDE---EIGTPDDIKLYEPGYHKRYYEIKFHCKSDEEIEKMRREVVAH-YVEGI 583
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN---FETGTQP 490
WV YYYQGC SWKWYFP+HYAPFA+DF N+ E+ N FE G QP
Sbjct: 584 AWVALYYYQGCPSWKWYFPYHYAPFAADFTNLQELFPNGIKFELG-QP 630
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPE+F+ID+NG K +WQG+ LLPF+DE+RL A+ YE L+ EE +
Sbjct: 661 DSEIIDFYPEEFEIDMNGAKMSWQGIPLLPFIDEKRLLDAVQKQYELLTPEEKD 714
>gi|241954112|ref|XP_002419777.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
gi|223643118|emb|CAX41992.1| 5'-3' exoribonuclease, putative [Candida dubliniensis CD36]
Length = 978
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/369 (50%), Positives = 255/369 (69%), Gaps = 16/369 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I VE++ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-ETDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K P+ EDEM + IF+ DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETAEKIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
A+K+ K ++ ++E+ L G I+ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 AAKDAELKAKQLEIEVKERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L++DPGW ++VI+SDA VPGEGEHK+M +IR QR+ P +DPNT+HC+ G DADLI
Sbjct: 175 AYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ Q + + Q+ +A N V+ F+
Sbjct: 235 LGLATHEPHFRVLREDVFATQDKKFTIKDQIA---------EANSNDGDVVAKDDRKPFL 285
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ ++VLREYL+ EL P + FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 286 WLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDT 345
Query: 360 LVNLYKKTV 368
LV +K+++
Sbjct: 346 LVQCWKRSL 354
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 65/97 (67%), Gaps = 5/97 (5%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD---IAFRLMVGHEYVL 443
+KR + ++ +++ +S D+++LWE G+ RYYE+KF D+ R +V H YV
Sbjct: 522 SLKRKLESEEKDNKQTQS-DDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRH-YVE 579
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
G+ WV YYYQGC SW WYFP+HYAPFA+DF N+ E+
Sbjct: 580 GIAWVALYYYQGCPSWNWYFPYHYAPFAADFTNLEEL 616
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F+ID+NGKK +WQG+ LLPF+DE+RL A+ YE L+ +E
Sbjct: 659 DSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYELLTPDE 710
>gi|294657829|ref|XP_460123.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
gi|218512153|sp|Q6BNU7.4|XRN2_DEBHA RecName: Full=5'-3' exoribonuclease 2
gi|199432980|emb|CAG88393.2| DEHA2E18898p [Debaryomyces hansenii CBS767]
Length = 1003
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/377 (52%), Positives = 258/377 (68%), Gaps = 21/377 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDK-PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPA FRWLSRKYP +I VED QE+ + S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEDDVTQEIGAAQF----SDPNPNG-ELDNLYLDMNGIV 55
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPE K P+ EDEM + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 56 HPCSHPEHKLPPETEDEMFLDVFKYTDRVLLMARPRKVLMIAVDGVAPRAKMNQQRSRRF 115
Query: 120 RASKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
R++++ E R IRE+ I K K S +DSN ITPGTPFM L+ L Y+
Sbjct: 116 RSAQDAKIAHEEKERQIRERESRGESIDDAIKGKKS-WDSNAITPGTPFMDSLAQALRYW 174
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +L DPGW ++VI+SDA VPGEGEHK+M +IR QR+ P++DPNT+HC+ G DADLI
Sbjct: 175 VAYKLATDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYDPNTKHCIYGLDADLI 234
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQ--MGHEMKECVGLDAEPNPESVITFGSEV 296
LGLATHEP+F ++RE+ NQ+R + Q M + K+ + P
Sbjct: 235 FLGLATHEPHFRVLREDVFANQSRQMRISDQLSMTQDQKDSIAEQDAKKP---------- 284
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
F+++ ++VLREYLE EL P+L FP+ ERA+DDWVFMCFFVGNDFLPHLPSL++R+
Sbjct: 285 -FLWLHVNVLREYLEIELYNPHLSFPFDLERAIDDWVFMCFFVGNDFLPHLPSLDVRDNG 343
Query: 357 VDRLVNLYKKTVYKTQE 373
+D LVN +K+ + K ++
Sbjct: 344 IDILVNCWKRMLPKLRD 360
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 389 KRSFDDVD-ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD--IAFRLMVGHEYVLGL 445
KR D V+ E + +E+ D VR+WE G++ RYY+SKF V ++ R + Y+ G+
Sbjct: 519 KRPIDQVEAELPKPDENGDSVRMWEPGYRQRYYQSKFGVVSEEEINKIRRDMVRCYLEGI 578
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
WVL YYYQGC SW+WY+P+HYAPFA+DF+NI ++
Sbjct: 579 SWVLLYYYQGCPSWQWYYPYHYAPFAADFVNINDI 613
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I+DFYPE+F+ID+NGKK +WQG+ALLPF+DE RL +AL Y L+ +E E
Sbjct: 658 SEILDFYPEEFQIDMNGKKMSWQGIALLPFIDENRLLEALEKRYHLLTDDERE 710
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
++T G++ LE V+ ++ L EDEIF+KR + E K R + KRR K+A + K
Sbjct: 361 YITCDGNLNLESVEKLLSSLSYKEDEIFRKRHEGE---KRREENDKRR----KLAQEEEK 413
Query: 652 APSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
A Q+ PQ S D P D+N + G A+
Sbjct: 414 ALK----NQYIPQVSKGSDKAP--LTADINMPLLSTSGDAV 448
>gi|68466241|ref|XP_722895.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
gi|68466536|ref|XP_722750.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|74656669|sp|Q5AMG5.3|XRN2_CANAL RecName: Full=5'-3' exoribonuclease 2
gi|46444743|gb|EAL04016.1| hypothetical protein CaO19.4681 [Candida albicans SC5314]
gi|46444898|gb|EAL04170.1| hypothetical protein CaO19.12150 [Candida albicans SC5314]
Length = 968
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/369 (51%), Positives = 258/369 (69%), Gaps = 17/369 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I VE++ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K P+ EDEM + IF+ DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETAEKIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
A+K+ K ++ ++E+ L G I+ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 AAKDAELKAKQLEIEVQERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L++DPGW ++VI+SDA VPGEGEHK+M +IR QR+ P +DPNT+HC+ G DADLI
Sbjct: 175 AYKLSSDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ +Q + + Q+ DA N ++V + F+
Sbjct: 235 LGLATHEPHFRVLREDVFASQDKKFTIKDQIA---------DANSNGDTVAK-EDKKPFL 284
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ ++VLREYL+ EL P + FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 285 WLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDT 344
Query: 360 LVNLYKKTV 368
LV +K+++
Sbjct: 345 LVQCWKRSL 353
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDD---IAFRLMVGHEYVLGLCWVLKYYYQGC 456
+++ +D+++LWE G+ RYYE+KF D+ R +V H YV G+ WV YYYQGC
Sbjct: 531 DKQTQSDDIKLWEPGYNKRYYEAKFHYQSDEEIEQTKRDVVRH-YVEGIAWVALYYYQGC 589
Query: 457 RSWKWYFPFHYAPFASDFINIAEV 480
SW WYFP+HYAPFA+DF N+ E+
Sbjct: 590 PSWNWYFPYHYAPFAADFTNLEEL 613
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F+ID+NGKK +WQG+ LLPF+DE+RL A+ YE L+ +E
Sbjct: 656 DSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYELLTPDE 707
>gi|254571933|ref|XP_002493076.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|238032874|emb|CAY70897.1| Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA
metabolism [Komagataella pastoris GS115]
gi|328352909|emb|CCA39307.1| 5'-3' exoribonuclease 2 [Komagataella pastoris CBS 7435]
Length = 994
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/368 (49%), Positives = 252/368 (68%), Gaps = 12/368 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I ++D+ +++G+ P PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIQDEDVDIDGESRPTRYEDPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE KP P+ EDEMM+ +F + + + RPRK++Y+A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPEHKPVPETEDEMMLDVFAYTENVIMMARPRKVIYIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ + + A +++ G I+ + +DSN ITPGTPFM RL+ L Y+
Sbjct: 120 SAQDAKDANEKKAAELKEMEKKGEIIDDAIKNKKTWDSNAITPGTPFMHRLADSLRYWAA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L DPGW GI+VI+SDA+VPGEGEHKIM Y+R R+ P HDPNT HC+ G DADLI L
Sbjct: 180 YKLTTDPGWSGIEVIISDASVPGEGEHKIMSYVRSLRSSPKHDPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEP+F I+RE+ + + Q+ E L + P F++
Sbjct: 240 GLATHEPHFKILREDVFAQDKKSYSLQDQLRMTDIERQELKDKKTP-----------FLW 288
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ L++LREYL+ EL +P L FP+ E+++DDWVF+CFF GNDFLPHLPSL++R+ ++ L
Sbjct: 289 LHLNILREYLQIELNVPGLSFPFDLEKSIDDWVFICFFCGNDFLPHLPSLDVRDNSITTL 348
Query: 361 VNLYKKTV 368
V ++K+ +
Sbjct: 349 VTIWKQIL 356
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Query: 405 NDEVRLWEDGFKDRYYESKF---DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
N+E+RLWE G++ RYYE+KF D K R MV +Y+ G+ WVL YYYQGC SW W
Sbjct: 532 NEEIRLWEPGYRKRYYETKFHTKDPQKVKKIARNMV-QKYIEGVSWVLLYYYQGCPSWNW 590
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
Y+P+HYAPFA+DF+N++E+ F GT
Sbjct: 591 YYPYHYAPFAADFVNLSELKIEFVEGT 617
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S IIDFYPE+F +D+NGKK WQ + LLPF+DE RL KA+ Y++L+ +E
Sbjct: 649 NSEIIDFYPEEFPLDMNGKKVIWQAIPLLPFIDENRLLKAVQSKYDQLTEDE 700
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 588 TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAA 647
T G+LT G + L V+ ++ +L ED IF+KR + E + K+R+ Q + +A
Sbjct: 358 TMKGYLTTDGYLNLPAVERLLAELAKKEDYIFRKRYEDEK--RSLENQKRRKLAQEQSSA 415
Query: 648 QSTKAPSFIPGGQFAP 663
+S AP+ G AP
Sbjct: 416 RSQNAPNISTGKDKAP 431
>gi|406603016|emb|CCH45428.1| 5'-3' exoribonuclease 2 [Wickerhamomyces ciferrii]
Length = 940
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 265/372 (71%), Gaps = 10/372 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWLSRKYP +I +E+ V+G +P S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLSRKYPKIISPTLEEDATVVDGVTVPPSYSNPNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE++P P+ EDEM++A+FE DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 60 PCSHPENRPPPETEDEMLLAVFEYTDRVLNMARPRKVLMIAVDGVAPRAKMNQQRARRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ + E R+++ G ++ + +DSN ITPGTPFM +L+ L Y+
Sbjct: 120 SARDAKIQDEERQRLQDLREGYGEVIDEAVKVKKTWDSNAITPGTPFMDKLALALRYWTA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L++DPGWK ++VI+SDA VPGEGEHKIM+++R QR+ +++PNT+H + G DADLI L
Sbjct: 180 YKLSSDPGWKDLQVIISDATVPGEGEHKIMNFVRSQRSDIEYNPNTKHAIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLATHEP+F ++RE+ + V +M +E + + + S+ F++
Sbjct: 240 GLATHEPHFRVLREDVFARDNKMMSVQEKMNL---------SEEHRKLIEEKESKKPFLW 290
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ ++VLREYLE EL +P LPF + ERA+DDWVFMCFF GNDFLPHLPSL++R+ ++D L
Sbjct: 291 LNINVLREYLEIELNIPRLPFKFDLERAIDDWVFMCFFCGNDFLPHLPSLDVRDNSIDLL 350
Query: 361 VNLYKKTVYKTQ 372
V+++K+ + K +
Sbjct: 351 VSIWKQVLPKMK 362
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Query: 376 RQEENGGGGGRGVKRSFDDVDESSEEEESN---DEVRLWEDGFKDRYYESKFDVPKDDI- 431
+ E+ G R + S D SS+ E ++ D VRL+E G+ DRYY KF + +++
Sbjct: 523 KSEDATIGEKRQIPDSPTDSAVSSDSEAADVDGDPVRLFEPGYHDRYYRIKFHISDEEVE 582
Query: 432 AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
A V Y+ G+ WVL YYYQGC SW WY+P+HYAPFA DF NI ++D F G
Sbjct: 583 ATSKEVVKHYIEGISWVLLYYYQGCPSWNWYYPYHYAPFAQDFTNIKDLDIKFTQG 638
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYPEDF ID+NGKK +WQG+ LLPF+DE+RL + + Y KL+ E
Sbjct: 671 DSPIIDFYPEDFPIDMNGKKMSWQGIVLLPFIDEKRLLEVVRDQYPKLTDAE 722
>gi|448107650|ref|XP_004205418.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|448110652|ref|XP_004201682.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359382473|emb|CCE81310.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
gi|359383238|emb|CCE80545.1| Piso0_003664 [Millerozyma farinosa CBS 7064]
Length = 993
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 255/373 (68%), Gaps = 19/373 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I +ED+ E G D PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVIEDELDEEYGGSRYTD---PNPNG-EIDNLYLDMNGIVH 56
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE KP P+ EDEM + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR
Sbjct: 57 PCSHPEHKPPPETEDEMFLDVFKYTDRVLMMARPRKVLVIAVDGVAPRAKMNQQRSRRFR 116
Query: 121 ASKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ E R I E+ L I K K S +DSN ITPGTPFM RL+ L Y++
Sbjct: 117 SAQDAKIAHEEKERQINERELRGEMIDEAIKGKKS-WDSNAITPGTPFMDRLALALRYWV 175
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L+ +PGW ++VI+SDA VPGEGEHK+M +IR QR+ P+++PNT HC+ G DADLI
Sbjct: 176 AYKLSTEPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPEYNPNTSHCIYGLDADLIF 235
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQ--MGHEMKECVGLDAEPNPESVITFGSEVE 297
LGLATHEP+F ++RE+ NQ+R V Q M + K+ + E P
Sbjct: 236 LGLATHEPHFRVLREDVFANQSRQLRVSDQLSMSEDQKDALKKKEERKP----------- 284
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ L+VLREYLE EL P + FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +
Sbjct: 285 FLWLHLNVLREYLEIELYNPYISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGI 344
Query: 358 DRLVNLYKKTVYK 370
D LV +K+ + K
Sbjct: 345 DNLVRCWKRILPK 357
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 5/101 (4%)
Query: 384 GGRGVKRSFDDVDESSEEEE-SNDEVRLWEDGFKDRYYESKFDVPKD---DIAFRLMVGH 439
G KR FD+V S+++ ND++R+WE G+++RYY+SKF + + D + MV H
Sbjct: 515 GDNNRKRGFDEVQSDSDDQRLDNDKIRMWEPGYRERYYKSKFHITSEEDIDKVRKDMVKH 574
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
Y+ G+ WVL YYYQGC SW+WY+P+HYAPFA+DF NI E+
Sbjct: 575 -YLEGISWVLLYYYQGCPSWQWYYPYHYAPFAADFKNIREI 614
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S IIDFYPE+F+ID+NGKK +WQG+ALLPF+DE+RL +A+ YE L+ E E
Sbjct: 658 ESEIIDFYPEEFEIDMNGKKMSWQGIALLPFIDEKRLLEAVQKKYELLTEAEKE 711
>gi|238881714|gb|EEQ45352.1| 5'-3' exoribonuclease 2 [Candida albicans WO-1]
Length = 968
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/369 (50%), Positives = 259/369 (70%), Gaps = 17/369 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I VE++ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEEDHEIGGAKY----ENPNPNG-ETDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K P+ EDEM + IF+ DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKPPETEDEMFLDIFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETAEKIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
A+K+ K ++ ++E+ L G I+ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 AAKDAELKAKQLEIEVQERELR-GEIINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L++DPGW ++VI+SDA VPGEGEHK+M++IR QR+ P +DPNT+HC+ G DADLI
Sbjct: 175 AYKLSSDPGWANLQVIISDATVPGEGEHKLMNFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ +Q + + Q+ +A N ++V + F+
Sbjct: 235 LGLATHEPHFRVLREDVFASQDKKFTIKDQIA---------EANSNGDTVAK-EDKKPFL 284
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ ++VLREYL+ EL P + FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 285 WLHVNVLREYLQVELFTPRMSFPFELERAIDDWVFLCFFAGNDFLPHLPSLDVRDNGIDT 344
Query: 360 LVNLYKKTV 368
LV +K+++
Sbjct: 345 LVQCWKRSL 353
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDD---IAFRLMVGHEYVLGLCWVLKYYYQGC 456
+++ +D+++LWE G+ RYYE+KF D+ R +V H YV G+ WV YYYQGC
Sbjct: 531 DKQTQSDDIKLWEPGYNKRYYEAKFHCQSDEEIEQTKRDVVRH-YVEGIAWVALYYYQGC 589
Query: 457 RSWKWYFPFHYAPFASDFINIAEV 480
SW WYFP+HYAPFA+DF N+ E+
Sbjct: 590 PSWNWYFPYHYAPFAADFTNLEEL 613
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 41/52 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS IIDFYPE+F+ID+NGKK +WQG+ LLPF+DE+RL A+ Y L+ +E
Sbjct: 656 DSEIIDFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQKKYGLLTPDE 707
>gi|66826105|ref|XP_646407.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60474374|gb|EAL72311.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1190
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/376 (52%), Positives = 260/376 (69%), Gaps = 18/376 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAFFRWL KY +I E P+E +G + D + PNPNG E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTE--PREADGGRSVVDFTTPNPNG-EYDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P PK ++M+ +I+E +D LF I+RPRKL+YMA+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPKSIEDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFR 117
Query: 121 ASKET-AEKIAEVARIREKLLADGCILPPE-------KEKGSHFDSNCITPGTPFMARLS 172
A+ ++ +K E A RE++ DG E K+ FDSNCITPGT FM R++
Sbjct: 118 AALDSRLDKDKEAALWRERIY-DGLATQQEYEQYMEEKKNKFKFDSNCITPGTLFMDRVA 176
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y+ ++L DP WK +K+I+SDA+VPGEGEHKIMDY+R QRAQPD+DPN +H + G
Sbjct: 177 ESLRTYVAEKLTTDPAWKDVKIIISDASVPGEGEHKIMDYVRHQRAQPDYDPNLKHIIYG 236
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIMLGLATHE NF I+RE +P C C + GH EC E +SV F
Sbjct: 237 LDADLIMLGLATHEVNFDILREFIQPIARGVCHKCHKKGHLAIEC----KEEVDDSVKDF 292
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ + + L +L+EYLE E + + PF + +R +DD++F+CFFVGNDFLPHLP+LEI
Sbjct: 293 LVK-NYQILHLHLLKEYLELETKV-STPFGFDIDRIVDDFIFLCFFVGNDFLPHLPNLEI 350
Query: 353 REGAVDRLVNLYKKTV 368
++GA+DR++ YK+ +
Sbjct: 351 KDGAIDRVIKCYKELL 366
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 7/88 (7%)
Query: 391 SFDDVDESSEEE---ESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLC 446
S+DD +E+E +++ ++ E+G++DRYY+S F V +DDI + YV GL
Sbjct: 587 SYDDSSLPTEKEIFFDNSRNIKYSEEGWRDRYYQSCFQVENEDDIK---QICKSYVEGLV 643
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDF 474
WVLKYY++GC SW WY+P+HY+P+ +D
Sbjct: 644 WVLKYYFKGCSSWGWYYPYHYSPYITDI 671
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPII+FYP F+ID + ++GV LLPF++ +L K ++ L+ EE
Sbjct: 725 EESPIIEFYPRAFRIDRGPTEPLYKGVCLLPFINSIKLLKTISKTEPLLTEEE 777
>gi|385303464|gb|EIF47537.1| 5 -3 exoribonuclease 2 [Dekkera bruxellensis AWRI1499]
Length = 1025
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 256/372 (68%), Gaps = 16/372 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWLSRKYP +I +ED P V G + P D S NPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPSLFRWLSRKYPKIISPVIEDDPVIVGGIEQPLDYSAXNPNG-ELDNLYLDMNGIVH 59
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE+KPAP+ EDEMM+A+FE +R+ + RPRKLL +A+DGVAPRAKMNQQRSRRFR
Sbjct: 60 PCSHPENKPAPESEDEMMLAVFEYTNRVLNMARPRKLLMIAVDGVAPRAKMNQQRSRRFR 119
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++++ E R E++ G ++ +DSN ITPGTPFM L+ L +++
Sbjct: 120 SARDAEISNEERERKMEEMEGRGEVIDESIRHKKTWDSNAITPGTPFMDILAESLRFWVA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L NDPGW ++VI+SD++VPGEGEHKIM++IR QR+ P+++PNT HC+ G DADLI L
Sbjct: 180 YKLANDPGWSKLQVIISDSSVPGEGEHKIMNFIRSQRSDPEYNPNTTHCIYGLDADLIFL 239
Query: 241 GLATHEPNFTIIREEF--KPNQARPCDVCGQMG--HEMKECVGLDAEPNPESVITFGSEV 296
LATHEP+F ++RE+ K R Q G + + + L + P
Sbjct: 240 SLATHEPHFRVLREDVYAKDQLQRKLRNMDQFGIDQQTRNQIELIDKKKP---------- 289
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
FI++ + +LREYL EL++P L F + ERA+DDWVFMCFF GNDFLPHLP L++R+ +
Sbjct: 290 -FIWLHIGILREYLAVELSIPRLSFKFDLERAIDDWVFMCFFCGNDFLPHLPCLDVRDSS 348
Query: 357 VDRLVNLYKKTV 368
+D LV+++K+ +
Sbjct: 349 IDTLVSIWKRIM 360
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Query: 394 DVDESSEE---EESNDEVRLWEDGFKDRYYESKFDVPKDD----IAFRLMVGHEYVLGLC 446
D +ES+ + ++D +R+WE GF+ RYY++KF ++ I ++ G YV G+
Sbjct: 531 DTEESTSGALVDNNDDVIRMWEPGFRKRYYQAKFHTQDEEQLEQICRNMVKG--YVEGIS 588
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
WVL YYYQGC SW WY+PFHYAPFA DF N+ ++D FE G
Sbjct: 589 WVLLYYYQGCPSWNWYYPFHYAPFALDFKNLTDIDVTFERG 629
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+DS IIDFYP++F++D+NG K +WQG++LLPF+DE+RL KA+ Y L+ EE E
Sbjct: 661 EDSEIIDFYPKEFQVDMNGAKMSWQGISLLPFIDEKRLLKAVRSKYGSLTPEEVE 715
>gi|452818702|gb|EME25927.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 645
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/385 (51%), Positives = 249/385 (64%), Gaps = 23/385 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVE-----DKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDM 55
MGVPAFFRWLS KYP V+ +E D+ Q G + D ++PNPNG EFDNLYLDM
Sbjct: 1 MGVPAFFRWLSLKYPKVLCDVIELVGPYDQQQ---GDFVSIDPTEPNPNGREFDNLYLDM 57
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGIIHPCTHPE++P P E+EM IF IDRL ++RPRKL+Y+A+DGVAPRAK+NQQR
Sbjct: 58 NGIIHPCTHPENRPPPTTEEEMFEEIFRYIDRLVYMIRPRKLVYLAVDGVAPRAKINQQR 117
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA+KE EK E+ R+R++ G +P FDSN ITPGTPFM LS L
Sbjct: 118 SRRFRAAKEAEEKQKELLRVRDEWKKKGLRVPEYDPNRKPFDSNVITPGTPFMTNLSVAL 177
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
+I DR+ +DP + I VI SD++VPGEGEHKI ++IR QRAQ +DPNT H L G DA
Sbjct: 178 KQFIADRVAHDPAYNKISVIYSDSSVPGEGEHKIAEFIRTQRAQEGYDPNTSHVLYGLDA 237
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIML LATHE NF ++RE P+ P + + + + + ++ G+
Sbjct: 238 DLIMLALATHELNFYVLRERVFPS---PQQSEQKRQPQEAQDSKIQDSSDIQNAAAIGAR 294
Query: 296 VEFIFVRLSVLREYLEKELAMP------------NLPFPYSFERALDDWVFMCFFVGNDF 343
F + + +LRE LE E P + + ER +DD+VF+CFFVGNDF
Sbjct: 295 NSFQLLSIDILRECLEAEFMEPLEIGFEMESSSRHQRLEFDLERVIDDFVFLCFFVGNDF 354
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTV 368
LPHLPSL+IREGA+D L+ LYKK V
Sbjct: 355 LPHLPSLDIREGAIDYLIELYKKLV 379
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 406 DEVRLWEDGFKDRYYESKFD-VPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWY 462
D VRL E G+K+RYYE KF P+ + + R + ++Y GL WV++YYY+GC SW WY
Sbjct: 565 DVVRLGEQGWKERYYEKKFHWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWY 624
Query: 463 FPFHYAPFASDF 474
FP+HYAPFASD
Sbjct: 625 FPYHYAPFASDL 636
>gi|300176532|emb|CBK24197.2| unnamed protein product [Blastocystis hominis]
Length = 1028
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/377 (53%), Positives = 254/377 (67%), Gaps = 14/377 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+WL++KYP I++CVE+ V+G IP D S PNPNG+EFDN Y+DMNGIIH
Sbjct: 1 MGVPTLFKWLAKKYPKSIMNCVEEFGTMVDGLYIPPDVSLPNPNGIEFDNFYIDMNGIIH 60
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+H E DK P+ + +F +DRLF IVRPRKL+Y+A+DGVAPRAKMNQQRSRR
Sbjct: 61 NCSHNEGLDK-VPETSKDTFENMFMYLDRLFEIVRPRKLIYLAVDGVAPRAKMNQQRSRR 119
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F A +E ++ IR ++LA G +PP + S FDSN ITPGT +M + L +Y
Sbjct: 120 FSAFQERQDRKDAEDEIRSRMLAAGKKVPPPRT--SSFDSNKITPGTEYMMEICDNLRWY 177
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I DR++++P W+ + VILSD +VPGEGEHKIMDYIR++RAQP +DPNT+H + G DADLI
Sbjct: 178 IADRMSHNPAWQNVTVILSDGSVPGEGEHKIMDYIRRERAQPGYDPNTKHIIHGLDADLI 237
Query: 239 MLGLATHEPNFTIIREEFKPN--QARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
MLGLATHE F I+REE + Q C +CG GH +C G +P P +T S+
Sbjct: 238 MLGLATHEAYFYILREEVTSSTLQVTRCALCGSDGHLAAQCQG--KKPQPRGALTRESKY 295
Query: 297 ---EFIFVRLSVLREYLEKELAMPN--LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
++L VLREYL+ E + + FPY FE LDD V +CF VGNDFLP LP L
Sbjct: 296 MKQPLQILQLPVLREYLQGEFGLLERVISFPYDFEHVLDDIVLLCFLVGNDFLPRLPCLS 355
Query: 352 IREGAVDRLVNLYKKTV 368
IREGA+D L NLYK +
Sbjct: 356 IREGALDLLFNLYKSIL 372
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKF-DVPKD--DIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
++ D +RL E+G+K RYY KF P D D AF + YV GL W++ YYY+GC
Sbjct: 558 DDSVQDTIRLGEEGWKQRYYREKFCRKPGDRLDGAFYRSICTSYVEGLRWIMLYYYKGCP 617
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W+FPFH+AP AS + T F+ G
Sbjct: 618 SWDWFFPFHFAPCASTLAEFSYEATPFKEG 647
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
+SPI DFYP+ + D +G F W AL+ F+D++RL A+ ++L+
Sbjct: 680 NSPIRDFYPKRIEYDTDGLPFRWLWTALISFIDKDRLLAAIDSVMDQLT 728
>gi|149236630|ref|XP_001524192.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451727|gb|EDK45983.1| 5'-3' exoribonuclease 2 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1049
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/371 (51%), Positives = 249/371 (67%), Gaps = 20/371 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLSRKYP +I VE+ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSRKYPKIISPVVEEDQNEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K AP+ EDEM + IF DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKKAPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETAEKIAEVAR-IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ K +A+ I +K I K K +DSN ITPGTPFM RL+ L Y +
Sbjct: 116 SAQDAKIKDEAIAKEIADKEFRGELIDNAVKVK-KLWDSNAITPGTPFMDRLAEALRYLV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L NDPGW ++VI+SDA VPGEGEHK+M +IR QR+ P +DPNT+HC+ G DADLI
Sbjct: 175 AYKLANDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYDPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQ--MGHEMKECVGLDAEPNPESVITFGSEVE 297
LGLATHEP+F ++RE+ NQ + + M + + + P
Sbjct: 235 LGLATHEPHFRVLREDVFANQEKRMTISDHVAMNKDQADLIEERDRKKP----------- 283
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F+++ ++VLREYL EL PN+ FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +
Sbjct: 284 FLWLHVNVLREYLAVELHNPNMSFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGI 343
Query: 358 DRLVNLYKKTV 368
D LVN +K+ V
Sbjct: 344 DTLVNCWKRCV 354
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 384 GGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDI--AFRLMVGHEY 441
G KRS+ DES E+E D +RL E G++ RYYE KF D+ R V Y
Sbjct: 533 GKETKKRSYQQ-DESIEDE---DRLRLHEPGYQKRYYEVKFHCTSDEEIEETRRNVVRSY 588
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV---DTNFETG 487
+ G+ WV YYYQGC SW W++P+HYAPFA+D N+ ++ FE G
Sbjct: 589 IEGISWVALYYYQGCPSWTWFYPYHYAPFAADMTNLRDLFPEGVKFELG 637
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
AA P G P+ S +IDFYPEDF+ID+NGKK +WQG+ LLPF++EERL KA+
Sbjct: 652 AASKHALPDAFHGLMTDPK-SEVIDFYPEDFEIDMNGKKMSWQGIPLLPFIEEERLLKAV 710
Query: 706 APYYEKLS 713
Y +LS
Sbjct: 711 QAKYSELS 718
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
++T G + L+ V+++M DL + EDEIF+ R + E + K +K E Q K A +S
Sbjct: 360 YVTSDGKLNLDSVEVLMADLAIKEDEIFRNRFRIEQRKEEGRKRRKLAEEQDK-ALKSVY 418
Query: 652 APSFIPGGQFAPQDS----PIID 670
G + AP ++ P++D
Sbjct: 419 LSQVSKGKEKAPMEANVNMPLMD 441
>gi|224065931|ref|XP_002301985.1| predicted protein [Populus trichocarpa]
gi|222843711|gb|EEE81258.1| predicted protein [Populus trichocarpa]
Length = 851
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/373 (56%), Positives = 261/373 (69%), Gaps = 20/373 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP V+V +E++P + G KIP D+S+PNPN +E+DNLYLDMNGI+H
Sbjct: 1 MGVPAFYRWLAEKYPLVVVDVIEEEPVVIEGVKIPVDTSRPNPNNIEYDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI-DGVAPRAKMNQQRSRRF 119
PC HPED+P+P DE+ +F+ IDRLF +VRPRKLLYMAI + +MNQQRSRRF
Sbjct: 61 PCFHPEDRPSPTSFDEVFQCMFDYIDRLFVVVRPRKLLYMAIGEWSCTSYEMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ A+ AE R+RE+ +G LPP KE FDSN ITPGT FMA L
Sbjct: 121 RAAKDAADAAAEEERLREEFEREGRKLPP-KESSQTFDSNVITPGTEFMAVL-------- 171
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
LN DPGWK IK ILSDANVPGEGEHKIM YIR Q P ++PNT+HCL G DADLIM
Sbjct: 172 ---LNYDPGWKKIKAILSDANVPGEGEHKIMSYIRLQSNLPGYNPNTRHCLYGLDADLIM 228
Query: 240 LGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
L LATHE F+I+RE F P Q C +CGQMGH +C G A+ G++V
Sbjct: 229 LSLATHEVLFSILREIVFTPGQQDKCFLCGQMGHLAADCEG-KAKRKAGEFDEKGNDVAV 287
Query: 298 ----FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ F+ + +LREYLE E +PN PF ER +DD++F+CFFVGNDFLPH+P+LEIR
Sbjct: 288 PKKPYQFLNIWILREYLEYEFRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIR 347
Query: 354 EGAVDRLVNLYKK 366
EGA++ L+ +YKK
Sbjct: 348 EGAINLLMAVYKK 360
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 23/143 (16%)
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDG 414
A+ N + V++ QE+L+ + + + R DV S E D+V+L E G
Sbjct: 484 AAIVEAENSLEIEVHENQEELKTKL------KELLREKSDVFNSKNHGE--DKVKLGEPG 535
Query: 415 FKDRYYESKF---------DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
+K+RYYE KF D+ +D R Y GLCWV+ YYY+G SW+W++P+
Sbjct: 536 WKERYYEQKFSAKTLEEMEDIRRDVKVLR------YTEGLCWVMHYYYEGVCSWQWFYPY 589
Query: 466 HYAPFASDFINIAEVDTNFETGT 488
HYAPFASD ++ ++D +FE G+
Sbjct: 590 HYAPFASDLKDLGQLDISFELGS 612
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP IDFYP DF++D+NGK++AWQG+A LP +DE RL + L+ EE+
Sbjct: 645 SPFIDFYPTDFEVDMNGKRYAWQGIAKLPLIDESRLLAEVQKIEHTLTEEEA 696
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTD L RV+ +Q +G ED+IF+KR + R K +K + R+ A
Sbjct: 367 GYLTDGSKPNLNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIKREKAQARRGDDAEPQN 426
Query: 651 KAPSFIPGGQF-------APQDSPIID 670
+ S + +F AP SP D
Sbjct: 427 QPESLVAVARFHGSRLASAPTPSPYQD 453
>gi|213405427|ref|XP_002173485.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212001532|gb|EEB07192.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 963
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/367 (53%), Positives = 256/367 (69%), Gaps = 11/367 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV--NGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MG+PA FR LSRKY VI +E P +V +G + D ++PNPNG E DNLYLDMNGI
Sbjct: 1 MGIPALFRLLSRKYTKVITPVIE-VPSKVLPDGTEFGPDLAEPNPNG-ECDNLYLDMNGI 58
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
+HPC+HPED+P P+ EDEMM+A+FE DR+ +VRPR LL +AIDGVAPRAKMNQQRSRR
Sbjct: 59 VHPCSHPEDRPPPETEDEMMLAVFEYTDRILAMVRPRNLLMIAIDGVAPRAKMNQQRSRR 118
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E A+K A + + G + K +DSNCITPGTPFM L+ L YY
Sbjct: 119 FRSAREAAQKAAALEECVREAKEKGIPVDENAAKKKAWDSNCITPGTPFMDILAKALRYY 178
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +LN +P +K ++ +LSDA+VPGEGEHKIM++IR QR P++DPNT+H + G DADLI
Sbjct: 179 ITHKLNTEPAFKNLRFLLSDASVPGEGEHKIMEFIRSQRVNPEYDPNTRHVIYGLDADLI 238
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGLATHEP+F ++RE+ Q G KE +GL + + F
Sbjct: 239 MLGLATHEPHFRVLREDVFFQQ-------GSTRRSKKEQLGLVPKIEATEAPKAPVKKPF 291
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
I++ + +LREYLE EL +PNLPFP+ ERA+DDWVF FFVGNDFLPHLPSL+IR+GA++
Sbjct: 292 IWLNVDILREYLEIELQVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGALE 351
Query: 359 RLVNLYK 365
RL ++
Sbjct: 352 RLTEAWR 358
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 378 EENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
EE G KR + E E D VRLWE G+++RYY KF +++
Sbjct: 557 EETSDVATAGTKRKKPETPELIE----GDTVRLWEPGYRERYYTQKFHFEENNEEQIREA 612
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
+ YV GLCWVL YYYQGC SW WY+PFHYAPFA+DF N++ + +F+
Sbjct: 613 VYHYVKGLCWVLLYYYQGCPSWTWYYPFHYAPFAADFKNLSSLKISFD 660
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 44/53 (83%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPE+F IDLNGKKF WQGVALLPF+DE+RL A+A Y +L+ EES
Sbjct: 695 DSEIIDFYPENFVIDLNGKKFEWQGVALLPFIDEKRLLDAVAKVYPELTEEES 747
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRER 641
G+LT G V L R ++I+ +G EDEIF++ +Q E RN+ +KRR +
Sbjct: 366 GYLTLDGSVNLSRAEVILSVIGDQEDEIFRRLKQNE---DRRNENQKRRRQ 413
>gi|443927373|gb|ELU45871.1| 5'-3' exoribonculease Dhp1 [Rhizoctonia solani AG-1 IA]
Length = 1086
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/370 (53%), Positives = 255/370 (68%), Gaps = 22/370 (5%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDMN 56
GVPA FRWLS+KYP ++ VE++P V N ++P D+S PNPNG E D LYLDMN
Sbjct: 7 GVPALFRWLSKKYPKIVSQVVEEEPTRVPDADGNLVELPMDTSTPNPNGFELDCLYLDMN 66
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI PAP+ E++MMV +F DR+ + RPRKLL+MAI VAPRAKMNQQRS
Sbjct: 67 GI----------PAPETEEDMMVEVFNYTDRVVSMARPRKLLFMAI--VAPRAKMNQQRS 114
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRA++E EK E + A G + E K + +DSN ITPGTPFM L+ L
Sbjct: 115 RRFRAAQEAKEKEEERKEAIKMFEALGHSVSEETTKKA-WDSNAITPGTPFMDLLAQSLR 173
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++ + N+DPGWK ++VI+SDA+VPGEGEHKIMD+IR+QR P HDPNT+H + G DAD
Sbjct: 174 YWVVQKQNSDPGWKNLQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTRHVIYGLDAD 233
Query: 237 LIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
LIML LATHEP+F ++RE+ F + C +CGQ GH +C G +P + +
Sbjct: 234 LIMLALATHEPHFRVLREDVFADSNKNSCRICGQEGHFAAQCTG---KPKEKDTSKPPEK 290
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
FIF+ ++VLREYL EL +PN+PF + ERA+DDWVF+ FFVGNDFLPHLPSLEIREG
Sbjct: 291 KPFIFLDVAVLREYLAIELNVPNIPFAFDLERAIDDWVFLIFFVGNDFLPHLPSLEIREG 350
Query: 356 AVDRLVNLYK 365
A+D L+ ++K
Sbjct: 351 AIDTLLKIWK 360
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 71/125 (56%), Gaps = 21/125 (16%)
Query: 384 GGRGVKRSF-----DDVDESSEEEESN----------------DEVRLWEDGFKDRYYES 422
G RG+KRS D+ D +E+EE D ++LWE G+K+RYY S
Sbjct: 605 GPRGIKRSVEEIEKDETDTPAEDEEPTVKKALKVNPDGTVEQEDTIKLWEPGYKERYYRS 664
Query: 423 KFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
KF +D R + Y+ GLCWVL+YYYQG SW W++P+H+APFA+DF ++ +D
Sbjct: 665 KFGAELNDTELRKQITTSYMEGLCWVLQYYYQGAPSWTWFYPYHFAPFAADFEDVEHMDI 724
Query: 483 NFETG 487
F G
Sbjct: 725 KFNLG 729
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP +F+ID+NGKK +WQGVALLPF+DE+RL A+A Y +LS +E
Sbjct: 761 EDSPIIDFYPTEFEIDMNGKKMSWQGVALLPFIDEKRLLGAMAERYPELSDDE 813
>gi|222447124|pdb|3FQD|A Chain A, Crystal Structure Of The S. Pombe Rat1-Rai1 Complex
Length = 899
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/371 (53%), Positives = 258/371 (69%), Gaps = 14/371 (3%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
GVPA FR LSRK+ VI +E +++ +G +I D S PNPNG+E DNLYLD NGI+H
Sbjct: 5 GVPALFRLLSRKFAKVITPVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDXNGIVH 64
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+PAP+ EDE VA+FE DR+ VRPR+LL++AIDGVAPRAK NQQRSRRFR
Sbjct: 65 PCSHPEDRPAPETEDEXXVAVFEYTDRILAXVRPRQLLFIAIDGVAPRAKXNQQRSRRFR 124
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+S+E A K E+ E+ G + K +DSNCITPGTPF L+ L YYI
Sbjct: 125 SSREAALKEEELQAFIEEAKQQGIPIDENATKKKSWDSNCITPGTPFXDTLAKSLRYYII 184
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++LN+DP W+ ++ ILSDA+VPGEGEHKI ++IR QR +P++DPNT H + G DADLI L
Sbjct: 185 NKLNSDPCWRNVRFILSDASVPGEGEHKIXEFIRSQRVKPEYDPNTHHVVYGLDADLIXL 244
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK---ECVGLDAEPNPESVITFGSEVE 297
GLATHEP+F ++RE DV Q G K E +G+ + +
Sbjct: 245 GLATHEPHFRVLRE----------DVFFQQGSTKKTKEERLGIKRLDDVSETNKVPVKKP 294
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FI++ +S+LREYLE EL +PNLPFP+ ERA+DDWVF FFVGNDFLPHLPSL+IR+GAV
Sbjct: 295 FIWLNVSILREYLEVELYVPNLPFPFDLERAIDDWVFFIFFVGNDFLPHLPSLDIRDGAV 354
Query: 358 DRLVNLYKKTV 368
+RL +++ ++
Sbjct: 355 ERLTEIWRASL 365
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 69/100 (69%), Gaps = 5/100 (5%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGL 445
G KR D S+EE E+ D VRL+E G+++RYYE KF + P + R V H YV GL
Sbjct: 569 GQKRKAPD---STEENENTDTVRLYEPGYRERYYEQKFHISPDEPEKIREAVKH-YVHGL 624
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
CWVL YYYQGC SW WY+P+HYAPFA+DF ++A +D FE
Sbjct: 625 CWVLLYYYQGCPSWTWYYPYHYAPFAADFKDLASIDVKFE 664
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++S IIDFYPE+F IDLNGKKF WQGVALLPF+DE RL A++ Y +L+ EES+
Sbjct: 698 ENSEIIDFYPENFTIDLNGKKFEWQGVALLPFIDENRLLNAVSKIYPQLTEEESK 752
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQS 649
G+LT G V L R ++I+ +G ED+IFK+ +Q E + ++R++R+ ++S
Sbjct: 370 GYLTLDGSVNLARAEVILSAVGNQEDDIFKRLKQQED--RRNENYRRRQQRESNQESES 426
>gi|354547470|emb|CCE44204.1| hypothetical protein CPAR2_400060 [Candida parapsilosis]
Length = 966
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 258/376 (68%), Gaps = 16/376 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP +I +E+ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDEHEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K P+ EDEM + IF DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETA-EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ +++A IREK A G ++ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 SAQDAKFKQMAIDKEIREK-EARGEMINDAIKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L+ DPGW ++VI+SDA VPGEGEHK+M +IR QR+ P ++PNT+HC+ G DADLI
Sbjct: 175 AYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ NQ R V +G K+ + L E + + F+
Sbjct: 235 LGLATHEPHFRVLREDVFANQQRHMTVSDHVGMS-KDQLSLIEERDKKK--------PFL 285
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ ++VLREYL EL P + FP+ ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 286 WLHVNVLREYLAIELYNPQISFPFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDT 345
Query: 360 LVNLYKKTVYKTQEQL 375
LV +KK + + ++ L
Sbjct: 346 LVGCWKKCLPRLRDYL 361
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWVLKYYYQGCRSW 459
+E D++RL E G++ RYY+ KF D+ R V Y+ G+ WV YYYQGC SW
Sbjct: 532 DEPVDDIRLHEPGYQKRYYQVKFHCKTDEEVEQVRRNVVKSYIEGISWVALYYYQGCPSW 591
Query: 460 KWYFPFHYAPFASDFINIAEV 480
W++P+HYAPFASD N+ E+
Sbjct: 592 TWFYPYHYAPFASDMTNLDEL 612
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS II+FYPE+F+ID+NGKK +WQG+ LLPF+DE+RL A+ YE+L+ E E
Sbjct: 655 DSEIIEFYPEEFEIDMNGKKMSWQGIPLLPFIDEKRLLDAVQGKYEELTEYEKE 708
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 574 TLAGKASKLFSRMLTYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRN 633
TL G K R+ Y LT G + L+ V++++ DL + EDEIF+ R F M
Sbjct: 345 TLVGCWKKCLPRLRDY---LTCDGKLNLQSVEVLLGDLAIKEDEIFRNR------FAMEK 395
Query: 634 KMKKRRERQMKMAAQSTKA 652
+ + R+R+ K+A + KA
Sbjct: 396 RREDNRKRR-KVAEEQDKA 413
>gi|448528644|ref|XP_003869739.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380354093|emb|CCG23606.1| Rat1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 964
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/376 (50%), Positives = 257/376 (68%), Gaps = 16/376 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWLS+KYP +I +E+ E+ G K PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLSKKYPKIISPVIEEDQHEIGGAKY----EDPNPNG-EIDNLYLDMNGIVH 55
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE K P+ EDEM + IF DR+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 56 PCSHPEHKRPPETEDEMFLDIFTYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 115
Query: 121 ASKETA-EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
++++ +++A IREK A G ++ + +DSN ITPGTPFM RL+ L Y++
Sbjct: 116 SAQDAKFKQMAIDKEIREK-EARGEMINDAVKGKKQWDSNAITPGTPFMDRLAEALRYWV 174
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+L+ DPGW ++VI+SDA VPGEGEHK+M +IR QR+ P ++PNT+HC+ G DADLI
Sbjct: 175 AYKLSTDPGWANLQVIISDATVPGEGEHKLMSFIRSQRSDPQYNPNTKHCIYGLDADLIF 234
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGLATHEP+F ++RE+ NQ R V +G K+ + L E + F+
Sbjct: 235 LGLATHEPHFRVLREDVFANQERHMTVSDHVGMS-KDQLSLIEERDKRK--------PFL 285
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
++ ++VLREYL EL P + F + ERA+DDWVF+CFF GNDFLPHLPSL++R+ +D
Sbjct: 286 WLHVNVLREYLSIELFNPQISFSFDLERAIDDWVFICFFAGNDFLPHLPSLDVRDNGIDT 345
Query: 360 LVNLYKKTVYKTQEQL 375
LVN +KK + + ++ L
Sbjct: 346 LVNCWKKCLPRLRDYL 361
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWVLKYYYQGCR 457
E++E D++RL E G++ RYY++KF D+ R V Y+ G+ WV YYYQGC
Sbjct: 527 EDDEPVDDIRLHEPGYQKRYYQAKFHCKTDEEVEQVRRDVVKSYIEGISWVALYYYQGCP 586
Query: 458 SWKWYFPFHYAPFASDFINIAEV 480
SW W++P+HYAPFASD N+ E+
Sbjct: 587 SWTWFYPYHYAPFASDMTNLREL 609
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS II+FYPE+F+ID+NGKK +WQG+ LLPF++E+RL A+ Y++L+ E E
Sbjct: 652 DSEIIEFYPEEFEIDMNGKKMSWQGIPLLPFINEKRLLDAVQGKYDQLTEYEKE 705
>gi|430813360|emb|CCJ29283.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 741
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/349 (53%), Positives = 241/349 (69%), Gaps = 34/349 (9%)
Query: 24 DKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFE 83
+KP +V+G I S PNPNG EFDNLYLDMNGI+HPCTHPEDKPAP +EDEMM+ IF+
Sbjct: 1 EKPIDVDGTLIYPSLSHPNPNGTEFDNLYLDMNGIVHPCTHPEDKPAPTNEDEMMLEIFK 60
Query: 84 CIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADG 143
+R+ +VRPRKLL +A+DGVAPRAKMNQQRSRRFRA+++ +K +++ + L A G
Sbjct: 61 YTERIINMVRPRKLLMIALDGVAPRAKMNQQRSRRFRAAQDAEKKASDLEEFLKLLKASG 120
Query: 144 CILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPG 203
+ EK +DSN ITPGTPFM L+ L Y+I ++N+D WK +KVI+SDA+VPG
Sbjct: 121 KSIDETLEKKKAWDSNVITPGTPFMDALAKSLRYWIIYKINSDVAWKNLKVIVSDASVPG 180
Query: 204 EGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPNQA 261
EGEHKIM++IR QR P +DPNTQH + G DADLIMLGLATHEP+F ++RE+ F+ +
Sbjct: 181 EGEHKIMEFIRSQRCSPGYDPNTQHVIYGLDADLIMLGLATHEPHFRVLREDVFFQDANS 240
Query: 262 RPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPF 321
+ C +CGQ+GH KEC E EL +PN F
Sbjct: 241 KGCHICGQIGHFAKECT--------------------------------EAELNIPNTSF 268
Query: 322 PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
+ ERA+DDWV +CFFVGNDFLPHLPSL+I EGA++ L N++K+ +++
Sbjct: 269 QFDLERAIDDWVCLCFFVGNDFLPHLPSLDIHEGAIETLGNIWKEKLHE 317
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 43/53 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ S IIDFYP++F ID+NGKKF+WQGV LLPF+DE+RL KA+ Y +LS EE
Sbjct: 530 EHSEIIDFYPKEFPIDMNGKKFSWQGVVLLPFIDEKRLLKAIEKVYPQLSEEE 582
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GC SWKWY+P+HYAPFASDF NI+ ++ FE G
Sbjct: 468 NGCPSWKWYYPYHYAPFASDFKNISSLNIQFELG 501
Score = 40.0 bits (92), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQ 624
G+LT G + L+R ++I+Q LG ED IF+KR +
Sbjct: 320 GYLTMDGKIDLKRAEIILQALGQQEDHIFRKRHE 353
>gi|429329440|gb|AFZ81199.1| 5'->3' exoribonuclease, putative [Babesia equi]
Length = 828
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/577 (41%), Positives = 311/577 (53%), Gaps = 101/577 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV----NGQKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP F+RWL +YP V +++ + N + I D PNPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDTIDNYKETSIDMSNIETIGVDLLSPNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GIIHPC HPE+ P+ E+ M IF+ IDR+F IVRPRK++++AIDGVAPRAK+NQQRS
Sbjct: 60 GIIHPCCHPENMEQPESEEVMFECIFDYIDRIFYIVRPRKIMFLAIDGVAPRAKINQQRS 119
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRF+++ + + ++ E+ +P K+K +DSN ITPGTPFM LS +
Sbjct: 120 RRFKSAADADLEDEVYNKLVEEFGKKKGDIPIRKDK---WDSNVITPGTPFMHELSKRIV 176
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
YI DR+ WK I VI SD+ VPGEGEHKIM +IR QR P++DPNT+H L G DAD
Sbjct: 177 DYIQDRIEKYDAWKRITVIFSDSGVPGEGEHKIMKFIRNQRHAPNYDPNTKHVLHGMDAD 236
Query: 237 LIMLGLATHEPNFTIIRE------EFKPNQARPCDVCGQMGHEMKECVGLDAEPNP--ES 288
LIMLGLATHE NF I+RE FKP +V Q+ E + V +P +
Sbjct: 237 LIMLGLATHEVNFFILREIVTNFINFKPED----NVANQI--EQAKSVVPKEKPTSSHQQ 290
Query: 289 VITF--GSEVEFIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGND 342
I+ S F++L VLREYL +L PN FER +DD V MCFF GND
Sbjct: 291 YISLMRQSWKPMQFLQLPVLREYLSYQLHFPNGWRDREGVIDFERCVDDLVLMCFFCGND 350
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTV---------------------------------- 368
FLPHLPS+ I G++D+++ LY+K +
Sbjct: 351 FLPHLPSISITGGSIDQMILLYQKILPDLGDYLSNEGDLNMPQVGSFVSYLSKIENQVFK 410
Query: 369 ----YKTQEQLRQEENGGG-----GGRGVKRSFDDVDESSE--------------EEESN 405
+K + + + ++NG G R DD S E +EE
Sbjct: 411 QAQEHKERYKRKMQQNGNSEIAQFGNVNKNRKLDDGSASVEPKEEGYTEAEFKRRQEEIL 470
Query: 406 DEVRLWEDG-------------FKDRYYESKFDV-PKDDIAFRL-MVGHEYVLGLCWVLK 450
+ R ED +K+ YY KF++ P DD+ + V YV GL WVLK
Sbjct: 471 KQERTVEDPKEPIDLSLNDPKLWKEAYYREKFNLGPNDDVTSLVNNVVFHYVEGLAWVLK 530
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YYYQGC SW W++PFHYAPF SD + +D FE G
Sbjct: 531 YYYQGCVSWGWFYPFHYAPFCSD-LKFEGLDIKFELG 566
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
+SP+ DFYP FK D NGK++ +Q VALLPF+DE+RL + P + LS
Sbjct: 599 NSPLADFYPLKFKEDPNGKRYKYQWVALLPFIDEKRLLNIVEPIEKSLS 647
>gi|164658822|ref|XP_001730536.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
gi|159104432|gb|EDP43322.1| hypothetical protein MGL_2332 [Malassezia globosa CBS 7966]
Length = 1133
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/341 (55%), Positives = 240/341 (70%), Gaps = 16/341 (4%)
Query: 34 IPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVR 93
IP D S+PNPNG E+D LYLDMNGI+HPCTHPE KP P+ E++MM +F+ +R+ ++R
Sbjct: 11 IPVDISRPNPNGEEYDCLYLDMNGIVHPCTHPEGKPPPETEEDMMAEVFKYTERVINMIR 70
Query: 94 PRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK- 152
PRKLL MAIDGVAPRAKMNQQRSRRFR++++ KI R +E L E E+
Sbjct: 71 PRKLLMMAIDGVAPRAKMNQQRSRRFRSAQDA--KILHQQREQELEERKRKGLAGENERI 128
Query: 153 GSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDY 212
+DSN ITPGTPFM L++ L Y+I +LN DPGWK + V+LSDA+VPGEGEHKIMDY
Sbjct: 129 EKSWDSNAITPGTPFMDLLASSLRYWIAHKLNTDPGWKNLCVVLSDASVPGEGEHKIMDY 188
Query: 213 IRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQA--RPCDVCGQM 270
IR++R+ P+HDPN +H + G DADLIML LATHEP+F ++RE+ A R C CGQ
Sbjct: 189 IRRKRSDPNHDPNMRHVIYGLDADLIMLSLATHEPHFKVLREDVFSQDAKHRGCHRCGQE 248
Query: 271 GHEMKECVGL---DAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
GH C G +A+P + FIF+ + LREYL+ EL P FP+ ER
Sbjct: 249 GHVAANCRGEARNEAKPF--------QKKPFIFLDVPTLREYLQVELRTPGTSFPFDLER 300
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
A+DDWVF+ FFVGNDFLPHLPSLEIREGA+D L+ ++K+ +
Sbjct: 301 AIDDWVFLIFFVGNDFLPHLPSLEIREGAIDTLLRIWKREL 341
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 58/82 (70%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E D V+LWE G+++RYY KF V D FR V YV GLCWVL YYYQGC SWKW+
Sbjct: 650 EYEDTVKLWEPGYRERYYRQKFGVELSDTKFRRSVVQAYVEGLCWVLAYYYQGCPSWKWF 709
Query: 463 FPFHYAPFASDFINIAEVDTNF 484
+P+HYAPFA+DF ++ ++ +F
Sbjct: 710 YPYHYAPFAADFTDVQDMHIDF 731
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYP +F ID+NGKK AWQGVALLPF+DE RL AL Y +L+ +E
Sbjct: 766 EESEIIDFYPNEFSIDMNGKKMAWQGVALLPFIDENRLLHALHKRYAQLTDDE 818
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 543 DNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRML-TYPGFLTDSGDVKL 601
D+ LI V +L L I + T+ +++ R L G++T++G V+L
Sbjct: 303 DDWVFLIFFVGNDFLPHLPSLEIREGAIDTLL------RIWKRELPNMSGYVTNNGKVEL 356
Query: 602 ERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
Q I+ L +ED+IF+KR++TE R + KRR
Sbjct: 357 ANAQYILDGLAEVEDDIFRKRKETEE----RQEANKRR 390
>gi|297737374|emb|CBI26575.3| unnamed protein product [Vitis vinifera]
Length = 845
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 248/373 (66%), Gaps = 32/373 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAF+RWL+ +YP +V+ VED+P FDNLYLDMNGIIH
Sbjct: 1 MGIPAFYRWLADRYPLAVVNAVEDRPAV-------------------FDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE PAPK ++ A+F+ IDR+F +VRPRKLLYMAIDGVAPRAKMNQQR+RRFR
Sbjct: 42 PCFHPEGLPAPKTYTDVFKAVFKYIDRIFSLVRPRKLLYMAIDGVAPRAKMNQQRARRFR 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE A+ + R++ ++ +L ++ DSN ITPGT FMA LS+ L YYIH
Sbjct: 102 AAKEAADDASGTERLKTVFESEMEMLA-LLDQTKKLDSNVITPGTEFMALLSSALKYYIH 160
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
R+N DPGW+GIKVILSDANVPGEGEHKIM YIR QR P DPNT+HCL G DADLIML
Sbjct: 161 LRMNLDPGWRGIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 220
Query: 241 GLATHEPNFTIIREEF-------KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
LATHE +F+I+RE+ K N+ R + + K+ E E + F
Sbjct: 221 ALATHEIHFSILREDVHKAYRKDKNNKPRKDSLLVNKRGKSKQ-----GEVGGEDIEDFI 275
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
S +F F+ + LR+YL ++++P+ ER +DD+VFMC FVGNDFLPH+PSLEI
Sbjct: 276 SRQKFQFLNIWTLRDYLAHDMSIPDRSLKTDLERLIDDFVFMCLFVGNDFLPHMPSLEIS 335
Query: 354 EGAVDRLVNLYKK 366
EGA+D L+ +YKK
Sbjct: 336 EGAIDLLMTVYKK 348
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D+++L EDG+K+R+Y KF+ +D R+ +Y+ G+CWV+ YYYQG SW+W++
Sbjct: 463 DKIKLGEDGWKERFYVEKFEAKTEDDRERVRRHAVLKYIEGICWVMHYYYQGVCSWQWFY 522
Query: 464 PFHYAPFASDFINIAEVDTNFETG 487
P+HYAPFASD + ++D F G
Sbjct: 523 PYHYAPFASDIYGLDQLDIQFTLG 546
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI+DFYP DF++D+NGK++ WQ + LPF+ E RL +A L+ +E
Sbjct: 578 ETSPILDFYPADFELDMNGKRYPWQAICKLPFIKESRLLAEIAKVESTLTDKE 630
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTE 626
G+LT+S +V LERV+ MQ +G E+ IF+KR Q +
Sbjct: 355 GYLTNSSEVYLERVERFMQVVGSHENAIFRKRSQVQ 390
>gi|326436856|gb|EGD82426.1| hypothetical protein PTSG_11962 [Salpingoeca sp. ATCC 50818]
Length = 1282
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/372 (52%), Positives = 255/372 (68%), Gaps = 32/372 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
+GVP+F+RWLSRKYP + VED+PQ + G+ +P D S+PNPN EFDNLYLDMNGIIH
Sbjct: 44 VGVPSFYRWLSRKYPKCVKDVVEDRPQNIGGEYVPVDISQPNPNKREFDNLYLDMNGIIH 103
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P +HPED+PAP+ ED+M VA+ E +DR+ VRPRKLL+MAIDGVAPRAKMNQQRSRRF+
Sbjct: 104 PASHPEDRPAPETEDDMFVAVLEYLDRVVACVRPRKLLFMAIDGVAPRAKMNQQRSRRFK 163
Query: 121 ASKETAEKI----AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
++K + V + C+ FDSN ITPGTPFM +L+ L
Sbjct: 164 SAKVCLNAVLWWGCVVGGGGVCISVCVCVT---------FDSNVITPGTPFMDKLAEYLR 214
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
+IH+++++DPGW GIKVILSDA VPGEGEHKIMD+IR+QRA P++D NT H + G DAD
Sbjct: 215 CFIHEKVSSDPGWTGIKVILSDATVPGEGEHKIMDFIRRQRAHPEYDANTSHVIHGLDAD 274
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LI+L LATHEP+FTI+REE P A+ + +
Sbjct: 275 LILLALATHEPHFTILREEVTPRNRE-----------------KSAQEKAMAALAVRRVC 317
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSF--ERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+IF++++VLREYLEKE+ + + F ER +DD+VFMC FVGNDFLPHLPSL+I E
Sbjct: 318 IWIFLQVNVLREYLEKEMRVADFSAAGGFDLERVIDDFVFMCCFVGNDFLPHLPSLKINE 377
Query: 355 GAVDRLVNLYKK 366
GA+D +++LY+K
Sbjct: 378 GAIDTILDLYRK 389
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 4/87 (4%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
E+ ++V L G+ +RYY+ KF D + R V YV GLCWV+KYYY+GC SW W
Sbjct: 623 EQHEEQVNLGLHGYHERYYKLKFG---DSVQPR-DVARAYVEGLCWVMKYYYEGCPSWNW 678
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGT 488
++P+HYAPFA DF+++A + F+ G+
Sbjct: 679 FYPYHYAPFAQDFVDVAGMSIRFDGGS 705
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI DFYP +F++D +G +FAWQ VALLPF+DE RL A+AP L+ EE
Sbjct: 738 SPIADFYPREFELDFDGARFAWQAVALLPFIDETRLLTAIAPLESTLTEEE 788
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRN---KMKKRRERQMKMAA 647
G+LT S +V LERVQL++ L +E++I R+ E K ++ KK +++
Sbjct: 396 GYLTQSSEVNLERVQLLLHGLAEVENKILSDRRFKEQRRKQKDVDITNKKTTREHLQLIL 455
Query: 648 QSTKAPSFIP-GGQFAPQDSP 667
+P +P G PQ P
Sbjct: 456 DCALSPPQLPIGDSEPPQKRP 476
>gi|301111760|ref|XP_002904959.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
gi|262095289|gb|EEY53341.1| 5'-3' exoribonuclease, putative [Phytophthora infestans T30-4]
Length = 972
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/383 (50%), Positives = 258/383 (67%), Gaps = 21/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKI--PFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAF+RW+ KYP +V CVE + + G++ D++ P+PNG E DNLY+DMNG+
Sbjct: 1 MGVPAFYRWVQEKYPKCVVDCVESRAVVLEGERHFELTDTTGPSPNGFEVDNLYVDMNGL 60
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE+ APK E+EM + +DRL VRPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 61 IHPCAHPENGEAPKTEEEMYRRVMAYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 120
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E +++ E + A G +P ++EK +DSN ITPGT FMA+L+ L +Y
Sbjct: 121 FRSAQEAEQRMEVEKEALEYMSALGHKVPSKQEK--PWDSNVITPGTKFMAKLAKHLRFY 178
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I DR+NN+ WK IK+ILSDA VPGEGEHK+M YIR QR+QP +DPN H L G DADLI
Sbjct: 179 IRDRVNNNAAWKSIKIILSDAGVPGEGEHKLMQYIRVQRSQPGYDPNQHHVLHGLDADLI 238
Query: 239 MLGLATHEPNFTIIREEF-----------KPNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
MLGLATHE F+I+REE + Q D G ++ K G E + +
Sbjct: 239 MLGLATHEVKFSILREEVLFGKQKYERERQKEQQTVLDANGTTLNKRKR--GEFGEHDAD 296
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPN--LPFPYSFERALDDWVFMCFFVGNDFLP 345
V + ++++ + + LREYL+ E + LPF Y FER +DD+VF+CFFVGNDFLP
Sbjct: 297 LVASDLKPLQYLHI--ATLREYLQVEFEPLSRVLPFEYDFERVIDDFVFLCFFVGNDFLP 354
Query: 346 HLPSLEIREGAVDRLVNLYKKTV 368
HLPSL+IR+GA+D L+ +Y K +
Sbjct: 355 HLPSLDIRDGALDFLILIYAKLL 377
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDI---AFRLMVGHEYVLGLCWVLKYYYQGCRS 458
EE D VRL E G+K RYY K DDI R V H Y+ GLCWV++YYY GC S
Sbjct: 491 EEVQDVVRLGEPGWKTRYYSDKLKA--DDIEVGGGRERVFHAYIEGLCWVMRYYYTGCAS 548
Query: 459 WKWYFPFHYAPFASDFINIAEVDTNFETG 487
W+W++PFHYAPFASD NI + F+ G
Sbjct: 549 WQWFYPFHYAPFASDLRNIDRFEIKFDEG 577
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPIIDFYP + +D NGK W V LLPF+DEERL +A+ +KL+ E +
Sbjct: 610 ESPIIDFYPTEIPVDPNGKAMPWLWVVLLPFIDEERLLEAMKEPNQKLTEAEKK 663
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 15/136 (11%)
Query: 516 INIAEVDTNFETGTQPVNNRILKF-----YVSDNIHLLILLVLRSWLVSLHVFTITYMIV 570
++IA + + +P++ R+L F V D+ L V +L L I +
Sbjct: 308 LHIATLREYLQVEFEPLS-RVLPFEYDFERVIDDFVFLCFFVGNDFLPHLPSLDIRDGAL 366
Query: 571 STMTLAGKASKLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKR--QQTET 627
+ L +++++L G++TD G V L RV +I+ ++G +ED IF++R +Q E
Sbjct: 367 DFLIL------IYAKLLPAMGGYITDGGHVDLSRVDVILAEVGQVEDVIFQRRALKQAEN 420
Query: 628 MFKMRNKMKKRRERQM 643
+ ++ + ++ Q+
Sbjct: 421 ERRRKSHLSNEKKDQI 436
>gi|156034478|ref|XP_001585658.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980]
gi|154698945|gb|EDN98683.1| hypothetical protein SS1G_13542 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 931
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/364 (50%), Positives = 249/364 (68%), Gaps = 20/364 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPA FRWL+++YP ++ +E++P+E++GQ IP D PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPALFRWLTKQYPKIVSPVIEEQPREIDGQIIPIDIRGPNPNGEECDNLYLDMNGIVH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPED+P PKDE+EMM+ IF+ DR+ +VRPRKLL +AIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCSHPEDRPPPKDEEEMMLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++E EK + A + + L + G E E +DSN ITPGTPFM L+A L Y+I
Sbjct: 121 AAQEAKEKAEDKAELLKMLKSQGT-QAEETEVKKAWDSNEITPGTPFMDILAASLRYWIA 179
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+LN DP W +KVI+SD+ VPGEGEHKIM+++R QR+ PDHDPNT+H + G DADLIML
Sbjct: 180 YKLNTDPAWAKMKVIISDSTVPGEGEHKIMEFVRSQRSSPDHDPNTRHVMYGLDADLIML 239
Query: 241 GLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGL----DAEPNPESVITFGS 294
GLATHEP+F I+RE+ F + R C +CGQ GHE +EC G+ D E + ++ + +
Sbjct: 240 GLATHEPHFRILREDVFFNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKA--SAPT 297
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FI++ +S+LREYL E+ +D + + D +P++ ++
Sbjct: 298 LKPFIWLHVSILREYLAAEIL-----------EIREDGINTLIAIWRDNIPYMGGYLTKD 346
Query: 355 GAVD 358
G VD
Sbjct: 347 GHVD 350
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 60/82 (73%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D VRLWEDG+ DRYYE KF+ DI FR VG YV GL WVL YY+QGC SW WY+P+
Sbjct: 531 DTVRLWEDGYADRYYEQKFNRDPKDIEFRHQVGKAYVEGLAWVLLYYFQGCPSWDWYYPY 590
Query: 466 HYAPFASDFINIAEVDTNFETG 487
HYAPFA+DF N+ ++ NF+ G
Sbjct: 591 HYAPFAADFANLKDMKINFQKG 612
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 43/54 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+DS IIDFYPEDF +DLNGKKFAWQGVALLPF+D ERL A+A Y L V+ S
Sbjct: 644 EDSEIIDFYPEDFIVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTLPVDVS 697
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE------RQMK 644
G+LT G V LER Q I+ L ED IF++R++ E F+ + K+ R R
Sbjct: 341 GYLTKDGHVDLERAQFILDGLAKQEDAIFRRRRKAEENFQKKRKLNNERNERYGRGRGNN 400
Query: 645 MAAQSTKAPSFIPGGQFAPQDSPI 668
AQ + + P G AP P+
Sbjct: 401 AGAQDSPSNGRQPPGGAAPTGLPL 424
>gi|328865681|gb|EGG14067.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1157
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/380 (50%), Positives = 255/380 (67%), Gaps = 31/380 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAFFRWL KY +VI E P++ +G ++ D S+ N NG EFDNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLVDKYGNVITPTKE--PRDSDGSRLKCDFSELNVNG-EFDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P++ +MM +I E +D LF I+RPRKL+YMAIDGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPRNTQDMMDSIVEYLDLLFAIIRPRKLIYMAIDGVAPRAKMNQQRARRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCI-------LPPEKEKGSHFDSNCITPGTPFMARLSA 173
A+ ++ + AR + L +G + + + + HFDSNCITPGT FMA ++
Sbjct: 118 AALDSRITKEQAARDLIERLNNGSLSQEDYDAIQKDGAEKYHFDSNCITPGTEFMALVAL 177
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+ ++++ DP WK +KVI+SDA+VPGEGEHKIM+YIR QR+QPD++PN +H + G
Sbjct: 178 TLRQYVAEKISTDPAWKDVKVIISDASVPGEGEHKIMEYIRHQRSQPDYNPNLKHVMYGL 237
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DADLIML L+THE NF I+RE P + G A P P +
Sbjct: 238 DADLIMLALSTHEVNFDILREFIAPPKG--------------NRFGTPA-PTPSKDVDED 282
Query: 294 SEVEFI-----FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+F+ + L++LREYL+ EL N PF Y+ ER +DD++F+CFFVGNDFLPHLP
Sbjct: 283 EVKDFLVKDYQLLNLAILREYLDTELKC-NPPFEYNVERIIDDFIFICFFVGNDFLPHLP 341
Query: 349 SLEIREGAVDRLVNLYKKTV 368
SL+I EGA+DRL+ +YK+ +
Sbjct: 342 SLQINEGAIDRLMRIYKELL 361
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 407 EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+V + +G++ RYYE F+ + + YV GL WVL+YY+ GC SW WY+P+H
Sbjct: 571 DVNIGSEGWRTRYYEHHFETEQPQNELVRAICQSYVDGLAWVLRYYFHGCCSWGWYYPYH 630
Query: 467 YAPFASDFINIAE--VDTNFETGT 488
YAPF D V+ FE G
Sbjct: 631 YAPFILDLAENGSMIVEPQFELGA 654
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
I+ FYP +F ID+ + W+GV LPF+DE L AL P L+ +E+
Sbjct: 695 ILHFYPNEFLIDVAPGQPTWKGVCQLPFIDENELLSALKPLDNSLTEDEA 744
>gi|325186843|emb|CCA21388.1| 5'3' exoribonuclease putative [Albugo laibachii Nc14]
Length = 1023
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 254/382 (66%), Gaps = 18/382 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKI--PFDSSKPNPNGMEFDNLYLDMNGI 58
MGVPAF+RW+ KYP +V C E + G++ + + PNPN +E NLY+DMNG+
Sbjct: 8 MGVPAFYRWVLAKYPKCVVDCKEQNAVMIEGKRHYELLNITGPNPNELEVANLYIDMNGL 67
Query: 59 IHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
IHPC HPE+ PK E+EM + E +DRL VRPR++LY+AIDGVAPRAKMNQQR+RR
Sbjct: 68 IHPCAHPENGEQPKTEEEMYQRVMEYVDRLVAAVRPRRVLYLAIDGVAPRAKMNQQRARR 127
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE E+ E + A G + E+++ ++DSN ITPGT FM++LS L +Y
Sbjct: 128 FRSAKEAEERGEIEKEAIEYMKAMGHQVQ-EQDQSKNWDSNVITPGTKFMSKLSKYLRFY 186
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +R+N + WK IKVI SDA+VPGEGEHK+M +IR QR+QP +DPN H L G DADLI
Sbjct: 187 IRERINQNEAWKSIKVIFSDASVPGEGEHKLMSFIRLQRSQPGYDPNQHHVLHGLDADLI 246
Query: 239 MLGLATHEPNFTIIREEF----------KPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
MLGLATHE NF+I+REE K NQ D G K+ G E + +
Sbjct: 247 MLGLATHEVNFSILREEVLFGKQKYEKEKSNQQTILDANGTQDMRKKK-RGEHGEHDADV 305
Query: 289 VITFGSEVEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
+ T + ++F+ + + LREYLE E LPFPY FER +DD+VF+CFFVGNDFLPH
Sbjct: 306 IPTDQTPLQFLHI--ATLREYLEFEFLPLAQTLPFPYDFERVVDDFVFLCFFVGNDFLPH 363
Query: 347 LPSLEIREGAVDRLVNLYKKTV 368
LPSL+IR+GA+D L+ +Y K +
Sbjct: 364 LPSLDIRDGALDFLILMYAKLL 385
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 5/89 (5%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKDDIAF---RLMVGHEYVLGLCWVLKYYYQGCRS 458
+E ND VRL E G+K RYY KF DDIA + V YV GLCWV+KYYY GC S
Sbjct: 499 QEVNDVVRLGEPGWKARYYSDKFKA--DDIAHGGGKAKVLQSYVEGLCWVMKYYYSGCAS 556
Query: 459 WKWYFPFHYAPFASDFINIAEVDTNFETG 487
W W++PFHYAPFASD +NI + +F G
Sbjct: 557 WNWFYPFHYAPFASDLVNIDKFTISFHLG 585
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP + +D NGK W V LLPF+DE RL +A+ P EKLS E +
Sbjct: 619 SPIIDFYPTEIPVDPNGKPMPWLWVVLLPFIDEARLLQAMEPENEKLSALEKK 671
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 582 LFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKR--QQTETMFKMRNKMKKR 638
+++++L T G+LTD+G+V L RV I+ +G +EDE+F +R +Q E+ +N+
Sbjct: 380 MYAKLLPTLNGYLTDAGEVNLSRVNAILAQVGAVEDEVFLRRAAKQAESDRFRKNRFSNE 439
Query: 639 RERQMKMAAQSTKA 652
++ Q+ A+ + A
Sbjct: 440 KKDQIGAASVRSDA 453
>gi|145347657|ref|XP_001418279.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578508|gb|ABO96572.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 509
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 221/523 (42%), Positives = 290/523 (55%), Gaps = 74/523 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWL+ +YP + QE+ G +IP DNLYLDMNG+IH
Sbjct: 1 MGVPKFFRWLAERYPLL--------QQEIAGNQIP-----------GIDNLYLDMNGVIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+H D EDEMM +F +D LFR+ RP K+LYMAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHGAGTDVNTRMTEDEMMSKVFAYLDHLFRMTRPNKMLYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ AE A+ RE+ A G PE E G FDSNCITPGT FMARL+ L +Y
Sbjct: 102 FRSA-------AEAAKDREEARARG---EPEPE-GEPFDSNCITPGTEFMARLTEHLKFY 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ + DP W + VILS V GEGEHKIM++IR R QPD +PN HCL G DADLI
Sbjct: 151 VRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPDWEPNQTHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
ML L THEP+F ++RE K G+ G +E + NP ++ F
Sbjct: 211 MLALVTHEPHFCLLREVVKFG-------GGEKGQPSREILS-----NP-------TDDGF 251
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
I + + +LREYL+ E NLPF Y ER +DD++ +C VGNDFLP LP+L I EGA++
Sbjct: 252 ILLHIGLLREYLDLEFREKNLPFGYELERVIDDFILLCMLVGNDFLPALPTLNIAEGALN 311
Query: 359 RLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEE-----EESNDEVRLWED 413
L +Y T+ + +E GGG + S D ++ + E + ++ W
Sbjct: 312 TLFKVYHDTLPMLGGYITGDE--GGGTFNPELSADPTMMNAAKRALILEGGEEGLQAW-- 367
Query: 414 GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
KD YY K + + A + Y GL WVL+YYY+G SW WY+P+HYAP ASD
Sbjct: 368 --KDTYYREKLGLKIGEAAPLGEIRQAYFDGLNWVLRYYYRGVASWTWYYPYHYAPMASD 425
Query: 474 F-INIAEVDTNFETG-----------TQPVNNNRILKFILYHF 504
+ + + F+ G QP +++++L HF
Sbjct: 426 LCAGMGGLTSEFDYGEPFKPFEQLMAVQPPSSSKLLPEPFRHF 468
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
PQ SP+ +F+PED K+D GK+ W+GV LLPF+D +RL
Sbjct: 472 PQ-SPLAEFFPEDIKVDFEGKRNDWEGVVLLPFLDADRL 509
>gi|413924952|gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
Length = 893
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/382 (51%), Positives = 253/382 (66%), Gaps = 20/382 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIP---FDSSKPNPNGMEFDNLYLDMNG 57
MGVP+FF+WL KYP+++V ED G P +D PNG+ + NLYLDMN
Sbjct: 1 MGVPSFFKWLVGKYPNIVVPAKEDDGGAGAGASSPSSPWDEPAAGPNGV-YHNLYLDMNA 59
Query: 58 IIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
IIHPC HPED+ P DE+ A+FE IDRLFRIVRP KLLY+A+DGVAPRAKMNQQRS
Sbjct: 60 IIHPCFHPEDEVCPPTTFDEVFAAMFEYIDRLFRIVRPTKLLYLAVDGVAPRAKMNQQRS 119
Query: 117 RRFRASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RRF+A+KE + E +REK A+G + +E D N ITPGT FM +LS L
Sbjct: 120 RRFKAAKEAKDAELEEKLLREKFRAEGREVRARPRETHEVSDPNIITPGTEFMEKLSKAL 179
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YY+ RLN+DPGWKGIKVILSD+NVPGEGEHK+M +IR QR+ +DPNT HCL G DA
Sbjct: 180 EYYVRSRLNSDPGWKGIKVILSDSNVPGEGEHKVMSFIRGQRSLASYDPNTMHCLYGLDA 239
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEM-------KECVGLDAEPNPES 288
DLIML LA+HE +F+I+RE+ Q++P + C + +EM ++C G +
Sbjct: 240 DLIMLALASHELHFSILRED-GSRQSQP-EKCISLSNEMLKTEDSSRKCRGWFPQ----- 292
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
VI + + FV + VLREYLE +L +PN ER +DD++F+CF GNDF+P +P
Sbjct: 293 VIETTPKKPYQFVNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLTGNDFIPRIP 352
Query: 349 SLEIREGAVDRLVNLYKKTVYK 370
S+EI EGA+D L+ YK+T K
Sbjct: 353 SVEIHEGAIDLLLEAYKQTFNK 374
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 405 NDEVRLWEDGFKDRYYESKFDVPKDDIAFRL---MVGHEYVLGLCWVLKYYYQGCRSWKW 461
+D +RL G+K RYY KF V K +L MV Y+ GLCWVL+YY+ SW W
Sbjct: 502 HDMIRLGLAGWKSRYYREKFGVEKLSEVGKLKNDMV-QRYMEGLCWVLQYYFTDVPSWSW 560
Query: 462 YFPFHYAPFASDFINIAEVDTNFET 486
Y+P+++APFASDF +++ F T
Sbjct: 561 YYPYYHAPFASDFKGLSQFKICFTT 585
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S + FYP D +ID +GK+F WQG+A+LPF+DE+ L A KL+V E
Sbjct: 618 EESLVQKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLVSATKTVEGKLAVHE 670
>gi|50550657|ref|XP_502801.1| YALI0D13750p [Yarrowia lipolytica]
gi|74634562|sp|Q6C961.3|XRN2_YARLI RecName: Full=5'-3' exoribonuclease 2
gi|49648669|emb|CAG80989.1| YALI0D13750p [Yarrowia lipolytica CLIB122]
Length = 1010
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 186/387 (48%), Positives = 251/387 (64%), Gaps = 54/387 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIP-FDSSKPNPNGMEFDNLYLDMNGII 59
MGVP +R LS+K P ++ +ED+ V+G++IP D S PNPNG E DNLYLDMNGI+
Sbjct: 1 MGVPGLYRHLSQKCPKIVSDVIEDETTIVDGEEIPGSDYSAPNPNG-ELDNLYLDMNGIV 59
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPCTHPE + AP EDEM++A+F+ +R+ + RPRK+L MAIDGVAPRAKMNQQR+RRF
Sbjct: 60 HPCTHPEGEEAPPSEDEMLLAVFKYTERVLNVCRPRKVLMMAIDGVAPRAKMNQQRARRF 119
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKG------------------SHFDSNCI 161
R++K+ A I + + +L A L EKG +DSN I
Sbjct: 120 RSAKDAA--IEAESTLESELKAKTIELQSSGEKGKSLETILDEFKQGLVNKPGKWDSNAI 177
Query: 162 TPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPD 221
TPGTPFM +L+A L Y++ +LN +PGW+ +KV++SDA VPGEGEHKIM++IR QR P
Sbjct: 178 TPGTPFMEKLAAALRYWVGYKLNTEPGWRDLKVVISDATVPGEGEHKIMEFIRSQRGDPT 237
Query: 222 HDPNTQHCLCGADADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGL 280
++ NT HC+ G DADLI LGLATHEP F ++RE+ F+ N+ GH+ K
Sbjct: 238 YNANTSHCIYGLDADLIFLGLATHEPKFKLLREDVFRQNKT--------AGHQKK----- 284
Query: 281 DAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFF 338
FI++ + +LREYL ++L P P+ ERA+DDWVF+CFF
Sbjct: 285 ----------------PFIWLNIDILREYLREDLRFTHPQTKIPFDLERAIDDWVFLCFF 328
Query: 339 VGNDFLPHLPSLEIREGAVDRLVNLYK 365
VGNDFLPHLP+ ++R+G+++ LVN +K
Sbjct: 329 VGNDFLPHLPACDVRDGSINVLVNQWK 355
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
D V+ + G+ +RYY +KF +D++ R V EY+ G+CWVL YYY GC+SW W++P
Sbjct: 539 DHVQFHKSGYTERYYMNKFHAKEDEVDNLRRQVAEEYMKGVCWVLMYYYHGCQSWSWFYP 598
Query: 465 FHYAPFASDFINIAEVDTNF 484
+HYAP A DF I+ + F
Sbjct: 599 YHYAPLAGDFDQISNMKVEF 618
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ ++SPIID+YPE+F++DLNGKK W+ V LLPF++ + L + + Y +L+ EE +
Sbjct: 650 MSEENSPIIDYYPENFQLDLNGKKQEWKAVVLLPFINADHLLEHVQAKYTELTPEEKD 707
>gi|281202869|gb|EFA77071.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 1091
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 188/376 (50%), Positives = 256/376 (68%), Gaps = 29/376 (7%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAFFRW+ KY +IV E P+ +G ++ D+S+PN NG EFDNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWMVDKYNGIIVPTKE--PRHQDGSRVVCDNSEPNLNG-EFDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P++ +MM +I E +D +F IVRPR LLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 PCAHPEQGPKPRNTQDMMDSIMEYLDLVFAIVRPRNLLYMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCI-------LPPEKEKGSHFDSNCITPGTPFMARLSA 173
++ + + A+ + +A+G + L K++ HFDSNCITPGT FM ++
Sbjct: 118 SALDARLTREKEAKELMENIANGKMSESEVEALQKAKDEKFHFDSNCITPGTMFMDLVAL 177
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+ ++++ DP WK +KVI+SDA++PGEGEHKIMDYIRKQRAQ D++PN ++ + G
Sbjct: 178 TLRSYVAEKVSTDPAWKNLKVIISDASIPGEGEHKIMDYIRKQRAQKDYNPNQKNVIYGL 237
Query: 234 DADLIMLGLATHEPNFTIIRE----EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV 289
DADLIML LATHEPNF I+RE + + Q+ P ++ G G D E +
Sbjct: 238 DADLIMLALATHEPNFEILREFVQTKGRKQQSTPKEMQG----------GDDGEEEKKDF 287
Query: 290 ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
+T ++ + L++ R+YL+ EL + F + ER +DD++ +CFFVGNDFLPHLPS
Sbjct: 288 LT----KDYQLLSLNLFRDYLDSELKC-SPAFGFDIERVIDDFILICFFVGNDFLPHLPS 342
Query: 350 LEIREGAVDRLVNLYK 365
L+I EGA+DR++ +YK
Sbjct: 343 LQINEGAIDRIMKIYK 358
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 14/133 (10%)
Query: 350 LEIREGAVD--RLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDE 407
+EI E V+ +L + KK + +E+ Q + GG G+ + ESS + +
Sbjct: 523 IEIMEVPVEEKKLPSGNKKRKHGEEEEEEQSNSNGGEGQSL--------ESSTFIDRMKD 574
Query: 408 VRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
V++ G+++RYY F+ K+D L V Y+ GL WVLKYYY+GC SW WY+P+H
Sbjct: 575 VKIGTKGWRERYYNHHFESEAKEDDNVVLHVCQSYIDGLAWVLKYYYKGCASWGWYYPYH 634
Query: 467 YAPFASDFINIAE 479
YAPF I+I+E
Sbjct: 635 YAPF---IIDISE 644
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPII FYP +F ID+ + W+GV LLPF+DE+ L +L KL+ EE
Sbjct: 696 SPIIHFYPSNFMIDVQPSQPIWKGVCLLPFIDEKELLSSLKSLENKLTDEE 746
>gi|198417497|ref|XP_002120271.1| PREDICTED: similar to 5-3 exoribonuclease 1 [Ciona intestinalis]
Length = 665
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/546 (38%), Positives = 297/546 (54%), Gaps = 123/546 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKEY---QVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP +D P + E+++ IF I+ LFRI+RP++ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDDDPHFRITEEQIFKDIFNYIEVLFRIIRPQRTFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE I + L G +LP EK FDSNCITPGT FM +L A L Y+
Sbjct: 102 FRSAKEAENNIKQA-------LQKGEVLPTEKR----FDSNCITPGTSFMEKLQAQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+GIKV LS PGEGEHKIM++IR +R+QP++DPNT+HCL G DADL+
Sbjct: 151 VQNKITTDPSWQGIKVYLSGHQTPGEGEHKIMEFIRYERSQPEYDPNTRHCLYGLDADLL 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THEP+F ++REE K + + S ++ F
Sbjct: 211 MLGLCTHEPHFALLREEVKFTRQK------------------------SSKTQNAAQTTF 246
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI------ 352
+ +S+LREY+E E PNLPF ++ E +DDWV M F VGNDF+PHLP L I
Sbjct: 247 HLLHISLLREYIEHEFEAPNLPFEFNIESIIDDWVLMGFLVGNDFIPHLPDLHISTSALP 306
Query: 353 -----------------REGAVDRL--VNLYKKT-----------VYKTQEQLRQEENGG 382
EG V L + +Y K VY + L +
Sbjct: 307 FLYQTYIQVLPTLGGYLNEGGVINLGRLEVYLKAISSFDMDHFEEVYSDYKWLEAKSKSK 366
Query: 383 G-------GGR-------------GVKRSFDDVDESSEEEES--NDEVRLWEDGFKDRYY 420
GG +K+ + E+ +EE S + E +L K YY
Sbjct: 367 KPTDCLLVGGEVTEDKSLKIVKDLAIKQGTIEATETVDEEHSTFDQEFKL----HKRAYY 422
Query: 421 ESKFDV--PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIA 478
++KF++ +D+I+ + +EY+LG+ W+ YYY G +SW W++P+HY+P+ SD NI+
Sbjct: 423 QTKFNIEGTEDEIS---TIAYEYILGIQWICHYYYNGVQSWDWFYPYHYSPYMSDLCNIS 479
Query: 479 EVDTNF 484
+ +
Sbjct: 480 TLHLTY 485
Score = 42.7 bits (99), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
+ S I DFYP +F DLNGK+ W+ V +PF++E
Sbjct: 519 ESSIIGDFYPSNFSTDLNGKQQEWEAVVQIPFIEE 553
>gi|399215845|emb|CCF72533.1| unnamed protein product [Babesia microti strain RI]
Length = 803
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 218/523 (41%), Positives = 286/523 (54%), Gaps = 73/523 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWL ++P V G DS +DNLYLDMNGI+H
Sbjct: 1 MGVPTFYRWLCSRFPKVPKDITNKANTSGEGDSHFTDSLFTE----RYDNLYLDMNGIVH 56
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P +E+EM AIF+ IDRL +RP++LLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 57 PCCHPEYLPQPSNEEEMFEAIFDYIDRLIETIRPKRLLYLALDGVAPRAKMNQQRSRRFK 116
Query: 121 A--SKETAEK-IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
A +E A+K + E L+ P+ E+ +DSN ITPGTPFM +L +
Sbjct: 117 AVYEREYAQKQLQNDKSTPETNLSKSRQNIPQNEQQKVWDSNVITPGTPFMYQLGLEVEE 176
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
Y+ +RL N W + VI+SD+N PGEGEHKI+++IR QR ++DPNT+H + G DADL
Sbjct: 177 YVSNRLENSDIWHNLTVIISDSNSPGEGEHKIINFIRTQRQSSNYDPNTRHVIHGMDADL 236
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE---SVITF 292
IML LATHEPNF I+RE FK Q + + +E P S++
Sbjct: 237 IMLALATHEPNFFILREVVPFK-----------QFNSTTQPTISDTSETVPSLKYSLMLR 285
Query: 293 GSEVEFIFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
S + +++ VLREYL K+ ER +DD V MCFF GNDFLPHLPS
Sbjct: 286 KSWKQLQIIQIPVLREYLSYLFKDCGC-------DLERCIDDLVLMCFFCGNDFLPHLPS 338
Query: 350 LEIREGAVDRLVNLYKK-----------------------TVYKT---QEQLRQEENGGG 383
+ I G++D+++ LY++ T Y T E L + N G
Sbjct: 339 MSITLGSIDQMIYLYQQIFPTLGGYLTDCGKINMPQLEMFTSYLTAVEHETLSLKGNNHG 398
Query: 384 GGRGVKRSFDDVDESSEEEESNDEVRLWEDG----------FKDRYYESKFDVPKDDIA- 432
R + D+V + EEE S + + G +K YY K D +DD+A
Sbjct: 399 ATRRAGNA-DNVTNNDEEETSKTGMIFTDLGIDVTLGSPEVYKKSYYIKKLDCSEDDVAK 457
Query: 433 -FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
M G EYV G+ WVL+YYYQG SW WY+P+HYAPFASD
Sbjct: 458 TASAMAG-EYVKGMEWVLEYYYQGIPSWNWYYPYHYAPFASDL 499
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
SPI ++YP K+D NG ++ +Q VALLPF+DE+ L + P
Sbjct: 544 SPIAEYYPRTLKLDPNGSRYRYQWVALLPFIDEQLLLATVKP 585
>gi|296084855|emb|CBI28264.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 214/523 (40%), Positives = 302/523 (57%), Gaps = 49/523 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL KYP ++V VED+ +SS NPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDER----------ESSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC HPED+ P +E+ ++E IDR+F IVRPRKLLYMAIDGVAPRAKMNQQR RRF
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRF 110
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ +K+ AE R+R + +G L P++E D N ITPGT FM +S L YI
Sbjct: 111 QTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYI 169
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R+ ++ GWK +KVILSD+NVPGEGEHKIM +IR QR+ PD++PNT HCL G DADLIM
Sbjct: 170 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIM 229
Query: 240 LGLATHEPNFTIIREEFKPNQAR-PCDVCGQMGHE--------------MKECVGLDAEP 284
L LATHE +F+I+RE+ + R C+ + K+ + +D
Sbjct: 230 LALATHEVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTN 289
Query: 285 NPESVITFGSEVE--FIFVRLSVLREYLEKELAMPNLPFPY---SFERALDDWVFMCFFV 339
+ + S ++ + F+ + +LREYLE ++ + + P +FER + C+ V
Sbjct: 290 SFIKNLESKSSIKMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIR---CYECYMV 346
Query: 340 GNDFLPHLPSLEIREGAVDR---LVNLYKKTVYKTQEQLRQEE-----NGGGGGRGVKRS 391
+ + ++ V++ LV Y++ ++K + LR + + KR
Sbjct: 347 DMERIEEKKGSFVKLKRVEKFILLVGTYEEKIFKKRMALRDSKLRWLLSTFYTKEMKKRL 406
Query: 392 FDDVDESSEEEESN----DEVRLWEDGFKDRYYESK--FDVPKDDIAFRLMVGHEYVLGL 445
+++ S+ S D VRL G+K+RYY+ K D + + R + +Y GL
Sbjct: 407 KENIRAKSDLWRSGSLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGL 466
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
WVL+YY+ G SW W++P+HY PFASDF ++ V FE G+
Sbjct: 467 LWVLQYYFSGVPSWTWFYPYHYGPFASDFKGLSRVKGKFERGS 509
>gi|294884783|gb|ADF47407.1| exoribonuclease-2, partial [Dugesia japonica]
Length = 801
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 163/226 (72%), Positives = 186/226 (82%)
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
LP K HFDSNCITPGTPFMARL+ L YY++++LN+DPGWK I+VILSDAN PGEG
Sbjct: 3 LPEPKSASEHFDSNCITPGTPFMARLTIALQYYVYNKLNSDPGWKNIQVILSDANAPGEG 62
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIMDYIR+QRA P HDPNT+HCLCGADADLIMLGLATHEP FTIIREEFKPNQ RPC+
Sbjct: 63 EHKIMDYIRRQRASPTHDPNTKHCLCGADADLIMLGLATHEPYFTIIREEFKPNQPRPCE 122
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSF 325
+CGQM H M EC GL + + GSE EFIF+ L+ LREYL++EL +PNL F Y F
Sbjct: 123 ICGQMDHVMTECAGLPSAEFNIAANNKGSETEFIFIHLNTLREYLQQELVIPNLHFQYDF 182
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
ERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DRL+ +YK +V KT
Sbjct: 183 ERAVDDWVFMCFFVGNDFLPHLPSLEIREKAIDRLITIYKSSVSKT 228
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Query: 388 VKRSFDD----VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMVGHEYV 442
KR FDD D+ +EE + DEV+LWEDG++ RYY+SKF V D+ F + V H+Y+
Sbjct: 340 AKRKFDDDIDPEDKKNEELDKRDEVKLWEDGYRSRYYQSKFGVSVDENPDFCVNVAHQYL 399
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
GLCWVL YYYQGC SW WY+P+HYAPFA DF+N++E D FE T+P N
Sbjct: 400 RGLCWVLAYYYQGCVSWTWYYPYHYAPFAVDFVNLSEADVTFEKKTKPFN 449
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SP+ID YP +FKIDLNGK++ W GVALLPFVDE RL + L Y L+ +E E
Sbjct: 478 ESPVIDLYPTNFKIDLNGKRYDWMGVALLPFVDEVRLLQVLKERYSMLTEDEKE 531
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LTDSG V + RVQLIM+DL ++EDEIFK R++ E F
Sbjct: 230 GWLTDSGKVNISRVQLIMKDLALLEDEIFKNRRENEVSF 268
>gi|308805328|ref|XP_003079976.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
gi|116058433|emb|CAL53622.1| 5'-3' exoribonuclease 1 (ISS) [Ostreococcus tauri]
Length = 1418
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/584 (38%), Positives = 296/584 (50%), Gaps = 129/584 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWL+ +YP + QE+ G +IP + DNLYLDMNG+IH
Sbjct: 74 MGVPKFFRWLAERYPLL--------QQEIAGSQIP-----------KIDNLYLDMNGVIH 114
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+H D EDEMM +F +D LFR+ RP KLLYMAIDGVAPRAKMNQQRSRR
Sbjct: 115 NCSHGAGTDVNTRMSEDEMMSKVFAYLDHLFRMTRPNKLLYMAIDGVAPRAKMNQQRSRR 174
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ E A+ E R E PE E G FDSNCITPGT FMARL+ L +Y
Sbjct: 175 FRSASEAAKDREEARRRGE----------PEPE-GEPFDSNCITPGTEFMARLTEHLKFY 223
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ + DP W + VILS V GEGEHKIM++IR R QP +PN HCL G DADLI
Sbjct: 224 VRKKQTEDPLWAKVTVILSGHEVRGEGEHKIMEHIRWARTQPGWEPNQTHCLYGLDADLI 283
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
ML L THEP+F ++RE K G+ G +E + NP ++ F
Sbjct: 284 MLALVTHEPHFCLLREVVKFG-------GGEKGQPSREILS-----NP-------TDDGF 324
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
I + + +LREYL+ E NL F Y ER +DD++ +C VGNDFLP LP+L I EGA++
Sbjct: 325 ILLHIGLLREYLDLEFREKNLSFGYDLERVIDDFILLCMLVGNDFLPALPTLNIAEGALN 384
Query: 359 RLVNLYKKTVYKTQEQLRQEENGG------------------------------------ 382
L +Y T+ + +E GG
Sbjct: 385 TLFKVYHDTLPMLGGYITGDEGGGTFNAERLEKIMSIMSTFERQVLEDRALDVEKEEEKK 444
Query: 383 -------GGGRG----VKRSFD-DVDESSEEEE----SNDEVRL-----------WEDGF 415
G G V+ FD D+ E SE + S+D V + E+G
Sbjct: 445 ARRNKRFGDGSASELNVEEKFDKDMSEMSETDGTPQVSSDPVMMNAAKRAMILEGGEEGL 504
Query: 416 K---DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+ D+YY K + + A + Y GL WVL+YYY+G SW WY+P+HYAP AS
Sbjct: 505 QAWKDQYYREKLGLKMGEAAPLAEIRQAYFDGLNWVLRYYYRGVASWTWYYPYHYAPMAS 564
Query: 473 DF-INIAEVDTNFETG-----------TQPVNNNRILKFILYHF 504
D + ++ + F+ G QP +++++L HF
Sbjct: 565 DLCAGMEKLTSEFDYGEPFRPFEQLMAVQPPSSSKLLPEPFRHF 608
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +F+PED +D GK+ W+GV LLPF+D +RL A+A SVE+S+
Sbjct: 614 SPLAEFFPEDIPVDFEGKRNDWEGVVLLPFLDADRLKAAVA------SVEDSQ 660
>gi|157864164|ref|XP_001680795.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68124087|emb|CAJ02069.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1490
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 217/532 (40%), Positives = 292/532 (54%), Gaps = 94/532 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW + ++PS+I PF S P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIIT---------------PFKDSPP-----PVDNLYLDINGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A + E EM+ A+F +++LF ++PRK +A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+RA E IA RE+ LA G +P EK+ FDSNCITPGTPFM R+S Y
Sbjct: 101 RYRAGYEMM--IA-----REEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DP W+G ++I S + PGEGEHKI+D+IR+++ QP++DPN HC+ G DADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P + + E E GL + +
Sbjct: 211 VMLALATHEPHFVLLREVVAFGPGSRKE-----RERQEEDEAKGLVKDK------AYHKA 259
Query: 296 VEFIFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
EF+ + ++V R+YL+ E LA FER +DD+VFMCFF+GNDFLP LP++
Sbjct: 260 DEFVLLHINVFRDYLQLEVKSYLAKAKSSVSVDFERVIDDFVFMCFFIGNDFLPTLPTIG 319
Query: 352 IREGAVDRLVNLY--------KKTVYKTQEQLRQEE---NGGGGGRGVKRSFDDVDESSE 400
I +G++ L+ +Y K +K + R E N G K F+ + +
Sbjct: 320 INDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRSAEVWLNEVG-----KLEFETLRRRQQ 374
Query: 401 EEESNDEVRLWEDG-----------------FKDRYYESK------FDVPKDDIAFRLMV 437
EE + R D FK RYY K +D +D+ R +
Sbjct: 375 EEAEFQKNRARRDPTHEVDTTSVIPITSILEFKQRYYGEKHGFAGGWDASSEDM--RRLR 432
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN--FETG 487
H YV GL WV+ YYYQG SWKW+FP +YAP ASD +N+ + N FE G
Sbjct: 433 EH-YVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAANVSFELG 483
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP+ + PE ID G + W+G+ L+PF+DE L A + +S E++
Sbjct: 516 SSPLAKYLPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDA 568
>gi|440293121|gb|ELP86283.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 782
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 210/514 (40%), Positives = 287/514 (55%), Gaps = 76/514 (14%)
Query: 37 DSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRK 96
D PN NG E DN YLDMNG+IHPC HP+D+PAP D+M++ + +D + IVRPRK
Sbjct: 12 DLDSPNLNGFEIDNFYLDMNGLIHPCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRK 71
Query: 97 LLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHF 156
L+YMA+DGVAPRAKMNQQR+RRF+A+++ + A+ LA G LP K++
Sbjct: 72 LVYMAVDGVAPRAKMNQQRARRFKAARDKKSAMDFEAQQAADALAKGTPLPASKKE---M 128
Query: 157 DSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQ 216
DSNCITPGT FM R+ L Y+ +R++ WK + VI+SD++VPGEGEHKIM+YIRKQ
Sbjct: 129 DSNCITPGTVFMDRVIETLKAYVKERISTSAYWKKLVVIISDSSVPGEGEHKIMEYIRKQ 188
Query: 217 RAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKE 276
+ QP+++PN HC+ G DADLIML LATHE NF +IRE+ + C +CG H +
Sbjct: 189 KDQPNYNPNLNHCIYGLDADLIMLTLATHERNFFVIREDVLNTK---CYICGG-AHPVAF 244
Query: 277 CVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMC 336
C + E NP I F+FV + +R+ + +P Y FER +DD++F+C
Sbjct: 245 CPKKN-EINPMDPIN----KPFVFVSILDVRKLIYLLGMVPG----YDFERIIDDFIFLC 295
Query: 337 FFVGNDFLPHLPSLEIREGAVDRLVNLYK----KTVYKTQEQ-------------LRQEE 379
FF+GNDFLPH PSLEI + ++ LYK K Y T L + E
Sbjct: 296 FFIGNDFLPHSPSLEIYHEDISLIMELYKEFLLKNGYVTDAGNLDMAAFKNLLTFLSRNE 355
Query: 380 NGGGGGRGVKRSFDDVDESSE----------EEESNDEVRLWED---------------- 413
+G K+ + S+ E ++N + +E
Sbjct: 356 SGRLIDVANKKRMETTISSNHVFRKQLSAIAEAKANKQTEEFEKLTKEFTESKLKFNEMI 415
Query: 414 ----------GFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
G+++RYY SK D+ K+ +V HEYV GL WVLKYYYQGC+ W W
Sbjct: 416 FGGDVEYDKPGYEERYYNSKLHIDIVKEPKKVEELV-HEYVKGLVWVLKYYYQGCKGWGW 474
Query: 462 YFPFHYAPFASD----FINIAEVDTNFETGTQPV 491
+FP +YAPF +D F + +FE + PV
Sbjct: 475 FFPHNYAPFITDMAKYFDYTWNITFDFEEPSTPV 508
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
+ SP+ +FYPE F+ID +G + GV LLPF++ +L K L P
Sbjct: 534 ETSPLKEFYPETFQIDFDGYAVEYLGVVLLPFIERPKLLKYLRP 577
>gi|242070071|ref|XP_002450312.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
gi|241936155|gb|EES09300.1| hypothetical protein SORBIDRAFT_05g003580 [Sorghum bicolor]
Length = 696
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 195/391 (49%), Positives = 249/391 (63%), Gaps = 27/391 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKP----------NPNGMEFDN 50
MGVP+F++WL KYP+++V ED SS P PNG+ + N
Sbjct: 1 MGVPSFYKWLVGKYPNIVVPAKEDDELLAGAGSTSSSSSSPPGDEQTQAAGGPNGV-YHN 59
Query: 51 LYLDMNGIIHPCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 109
LYLDMNGIIHPC HPED+ P DE+ A+F+ IDRLFRIVRP KLLY+A+DGVAPRA
Sbjct: 60 LYLDMNGIIHPCFHPEDQVYPPTTFDEVFAAMFDYIDRLFRIVRPTKLLYLAVDGVAPRA 119
Query: 110 KMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMA 169
KMNQQRSRRF+A+K+ E E +REK A+G + P +E D N ITPGT FM
Sbjct: 120 KMNQQRSRRFKAAKDAKEAELEEKLLREKFRAEGREVQP-RETNEVSDPNVITPGTEFME 178
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+LS L YYI RLN+DPGWKGIK ILSD+NVPGEGEHKIM +IR QR+ +DPNT+HC
Sbjct: 179 KLSKALEYYIRSRLNSDPGWKGIKAILSDSNVPGEGEHKIMSFIRGQRSLESYDPNTRHC 238
Query: 230 LCGADADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCG----QMGHEMKECVGLDAEP 284
L G DADLIML LA+HE +F+I+RE+ + Q C + ++C G
Sbjct: 239 LYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGW---- 294
Query: 285 NPESVITFGS-----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFV 339
P T S + + F+ + VLREYLE +L +PN ER +DD++F+CF
Sbjct: 295 FPRMTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFICFLT 354
Query: 340 GNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
GNDF+PH+PS+EI EGA+D L+ +YK+ K
Sbjct: 355 GNDFIPHIPSVEIHEGAIDLLLEVYKQAFNK 385
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Query: 405 NDEVRLWEDGFKDRYYESKFDVPKDDIAFRL---MVGHEYVLGLCWVLKYYYQGCRSWKW 461
+D +RL G+K R++ KF V K + +L MV +Y+ GLCWVL+YY+ SW W
Sbjct: 513 HDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMV-QKYLEGLCWVLRYYFADVPSWSW 571
Query: 462 YFPFHYAPFASDFINIAEVDTNFETGTQPV 491
Y+PF+YAPF SDF +++ +F T +P+
Sbjct: 572 YYPFYYAPFTSDFKGLSQFKISF-TADKPL 600
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S I FYP D +ID +GK+F WQG+A+LPF+DE+ L A +KL+V+E
Sbjct: 629 EESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLTSATKTVEDKLAVKE 681
>gi|398010273|ref|XP_003858334.1| 5'-3' exonuclease, putative [Leishmania donovani]
gi|322496541|emb|CBZ31610.1| 5'-3' exonuclease, putative [Leishmania donovani]
Length = 1499
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 214/532 (40%), Positives = 291/532 (54%), Gaps = 94/532 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW + ++PS+I PF S P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIIT---------------PFKDSPP-----PVDNLYLDINGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A + E EM+ A+F +++LF ++PRK +A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+RA E + RE+ LA G +P EK+ FDSNCITPGTPFM R+S Y
Sbjct: 101 RYRAGYE-------MMIAREEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DP W+G ++I S + PGEGEHKI+D+IR+++ QP++DPN HC+ G DADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P + + E E GL + +
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKERE-----RQEEDEAKGLVKDK------AYHKA 259
Query: 296 VEFIFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
EF+ + ++V R+YL+ E LA FER +DD+VFMCFF+GNDFLP LP++
Sbjct: 260 DEFVLLHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPTLPTIG 319
Query: 352 IREGAVDRLVNLY--------KKTVYKTQEQLRQEE---NGGGGGRGVKRSFDDVDESSE 400
I +G++ L+++Y K +K + R E N G K F+ + +
Sbjct: 320 INDGSIPALLHIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVG-----KLEFETLRRRQQ 374
Query: 401 EEESNDEVRLWEDG-----------------FKDRYYESK------FDVPKDDIAFRLMV 437
EE + R D FK RYY K +D +D+ RL
Sbjct: 375 EEAEFQKNRARRDPTHEVDTASVIPITSILEFKQRYYGEKHGFAGGWDANSEDMQ-RLR- 432
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT--NFETG 487
YV GL WV+ YYYQG SWKW+FP +YAP ASD +N+ + +FE G
Sbjct: 433 -EHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFELG 483
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP+ + PE ID G + W+G+ L+PF+DE L A + +S E++
Sbjct: 516 SSPLAKYLPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDA 568
>gi|339896661|ref|XP_001463108.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|321398929|emb|CAM65457.2| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1499
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/532 (40%), Positives = 290/532 (54%), Gaps = 94/532 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW + ++PS+I PF S P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIIT---------------PFKDSPP-----PVDNLYLDINGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A + E EM+ A+F +++LF ++PRK +A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDVDATRRSPTEKEMIQAMFVYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+RA E + RE+ LA G +P EK+ FDSNCITPGTPFM R+S Y
Sbjct: 101 RYRAGYE-------MMIAREEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DP W+G ++I S + PGEGEHKI+D+IR+++ QP++DPN HC+ G DADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P + + E E GL + +
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKERE-----RQEEDEAKGLVKDK------AYHKA 259
Query: 296 VEFIFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
EF+ + ++V R+YL+ E LA FER +DD+VFMCFF+GNDFLP LP++
Sbjct: 260 DEFVLLHINVFRDYLQLEVKGYLAKAKSSVSIDFERVIDDFVFMCFFIGNDFLPTLPTIG 319
Query: 352 IREGAVDRLVNLY--------KKTVYKTQEQLRQEE---NGGGGGRGVKRSFDDVDESSE 400
I +G++ L+ +Y K +K + R E N G K F+ + +
Sbjct: 320 INDGSIPALLRIYVDNMLSKSKYLTHKGEIDWRNAEVWLNEVG-----KLEFETLRRRQQ 374
Query: 401 EEESNDEVRLWEDG-----------------FKDRYYESK------FDVPKDDIAFRLMV 437
EE + R D FK RYY K +D +D+ RL
Sbjct: 375 EEAEFQKNRARRDPTHEVDTASVIPITSILEFKQRYYGEKHGFAGGWDANSEDMQ-RLR- 432
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT--NFETG 487
YV GL WV+ YYYQG SWKW+FP +YAP ASD +N+ + +FE G
Sbjct: 433 -EHYVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFELG 483
Score = 42.7 bits (99), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP+ + PE ID G + W+G+ L+PF+DE L A + +S E++
Sbjct: 516 SSPLAKYLPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDA 568
>gi|307106569|gb|EFN54814.1| hypothetical protein CHLNCDRAFT_24310, partial [Chlorella
variabilis]
Length = 326
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 239/336 (71%), Gaps = 14/336 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+++RWLS++YP V+ VED+ Q +NG ++P D+S+PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSYYRWLSQRYPKVVKDVVEDEVQVINGVEVPVDTSQPNPNGLEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+PAP E E+ +F+ IDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCFHPEDRPAPTTEQEVFTTMFDYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++E E+ E ++R++ G +P K++ + FDSN ITPGTPFM RLS L YYIH
Sbjct: 121 AAQEAEEREKEEEKLRDEFAKQGIKVP--KKESAVFDSNVITPGTPFMHRLSVALQYYIH 178
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RLN DPGW+GIKVILSDAN PGEGEHKIM YIR+QR P + PNT+HC+ G DADLIML
Sbjct: 179 LRLNADPGWRGIKVILSDANSPGEGEHKIMAYIREQRGLPGYSPNTRHCIYGLDADLIML 238
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG----SEV 296
LATHEP F I+RE C G C G A + + + G ++
Sbjct: 239 ALATHEPRFAILREV-------GCWQGWGAGRGGVGCWGARAGRDGGAGMQVGGMWVAKK 291
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDW 332
+ F+ + VLREYLE++L + + PFP+ ER DD+
Sbjct: 292 PYQFLLVGVLREYLERDLRV-HTPFPWDKERVYDDF 326
>gi|154331043|ref|XP_001561961.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059283|emb|CAM36982.1| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|449310628|gb|AGE92541.1| 5'-3' exonuclease [Leishmania braziliensis]
gi|449310652|gb|AGE92553.1| 5'-3' exonuclease [Leishmania braziliensis]
Length = 1513
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 213/533 (39%), Positives = 291/533 (54%), Gaps = 96/533 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW + ++PS+I PF S P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIIT---------------PFKDSPP-----PVDNLYLDINGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A + E EM+ A+F +++LF ++PRK +A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDVDATRRSPTEKEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+RA E + RE+ LA G +P EK+ FDSNCITPGTPFM R+S Y
Sbjct: 101 RYRAGYE-------MMVAREEALAMGEEVPEEKDM---FDSNCITPGTPFMVRVSTEFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DP W+ ++I S + PGEGEHKI+D+IR+++ QP++DPN HC+ G DADL
Sbjct: 151 FITMKLSTDPAWQRCEIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P + + E E GL + +
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKERE-----RQEEDEAKGLVKDK------AYHKA 259
Query: 296 VEFIFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
EF+ + +SV R+YL+ E LA FER +DD+VFMCFF+GNDFLP LP++
Sbjct: 260 DEFVLLHISVFRDYLQLEVKDYLAKSKSSTKIDFERIIDDFVFMCFFIGNDFLPTLPTIG 319
Query: 352 IREGAVDRLVNLY-----------------------------KKTVYKTQEQLRQEENGG 382
I +G++ L+ LY K ++T + +QEE
Sbjct: 320 INDGSIPVLLRLYVDNLLSKNRYLTHKGEIDWRNAEVWLNEVGKLEFETLRRRQQEEAEY 379
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESK------FDVPKDDIAFRLM 436
R + +VD +S ++ + E FK RYY K +D +D+ R +
Sbjct: 380 QKNRARRDPTHEVDTTSAMPITS----ILE--FKQRYYGEKHGFVGGWDANSEDM--RRL 431
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT--NFETG 487
H YV GL WV+ YYYQG SWKW+FP +YAP ASD +N+ + FE G
Sbjct: 432 REH-YVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDLVNLPGISARVTFEVG 483
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP+ + PE ID G + W+G+ L+PF+DE L A + +S E++
Sbjct: 516 SSPLAKYLPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQQNVSPEDA 568
>gi|401415084|ref|XP_003872038.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488260|emb|CBZ23505.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1527
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 215/532 (40%), Positives = 291/532 (54%), Gaps = 94/532 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW + ++PS+I PF S P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWAAERFPSIIT---------------PFKDSPP-----PVDNLYLDINGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A + E EM+ A+F +++LF ++PRK +A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDVDATRRSPTEKEMIQAMFIYLEKLFNAIQPRKYFLLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+RA E IA R++ LA G +P EK+ FDSNCITPGTPFM R+S Y
Sbjct: 101 RYRAGYEMM--IA-----RQEALAMGEEVPEEKDV---FDSNCITPGTPFMVRVSKEFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +L+ DP W+G ++I S + PGEGEHKI+D+IR+++ QP++DPN HC+ G DADL
Sbjct: 151 FITMKLSTDPAWQGCQIIFSGHDCPGEGEHKIVDFIRRRKMQPNYDPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P + + E E GL + +
Sbjct: 211 VMLALATHEPHFVLLREVVTFGPGSRKERE-----RQEEDEAKGLVKDK------AYHKA 259
Query: 296 VEFIFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
EF+ + ++V R+YL+ E LA FER +DD+VFMCFF+GNDFLP LP++
Sbjct: 260 DEFVLLHINVFRDYLQLEVKGYLAKAKSSASMDFERVIDDFVFMCFFIGNDFLPTLPTIG 319
Query: 352 IREGAVDRLVNLY--------KKTVYKTQEQLRQEE---NGGGGGRGVKRSFDDVDESSE 400
I +G++ L+ +Y K +K + R E N G K F+ + +
Sbjct: 320 INDGSIPALLRIYVDNMLSKNKYLTHKGEIDWRNAEVWLNEVG-----KLEFETLRRRQQ 374
Query: 401 EEESNDEVRLWEDG-----------------FKDRYYESK------FDVPKDDIAFRLMV 437
EE + R D FK RYY K +D D+ R +
Sbjct: 375 EEAEFQKNRARRDPTHEVDATSVMPITSILEFKQRYYGEKHGFAGGWDANSADM--RRLR 432
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT--NFETG 487
H YV GL WV+ YYYQG SWKW+FP +YAP ASD +N+ + +FE G
Sbjct: 433 EH-YVEGLMWVMHYYYQGVPSWKWFFPHYYAPMASDMVNLPAIAARVSFELG 483
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SP+ + PE ID G + W+G+ L+PF+DE L A + +S E++
Sbjct: 516 SSPLAKYLPEHIVIDREGARAPWEGIVLIPFIDERTLLAAYESVQKNVSPEDA 568
>gi|395510147|ref|XP_003759342.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 273
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 175/273 (64%), Positives = 211/273 (77%), Gaps = 10/273 (3%)
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNNDPGWK + VILSDA+ PGEG
Sbjct: 3 LPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNNDPGWKNLTVILSDASAPGEG 61
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIMDYIR+QRAQP+HDPNT HCLCGADADLIMLGLATHEPNFTIIREEFKPN+ +PC
Sbjct: 62 EHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLGLATHEPNFTIIREEFKPNKPKPCG 121
Query: 266 VCGQMGHEMKECVGLDAEPNPE----SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPF 321
+C Q+GHE+K+C GL E E SE EFI++RL+VLREYLE+EL M +LPF
Sbjct: 122 LCNQLGHEVKDCQGLPREKQGEHDQFEESLPASEGEFIYIRLNVLREYLERELTMASLPF 181
Query: 322 PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT L E+G
Sbjct: 182 TFDIERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKTGGYLT--ESG 239
Query: 382 GGGGRGVKR---SFDDVDESSEEEESNDEVRLW 411
+ V+ + +V++S ++ +DEV+++
Sbjct: 240 YVNLQRVQMIMLAVGEVEDSIFKKRKDDEVKVF 272
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTET 627
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E
Sbjct: 233 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEV 269
>gi|336468281|gb|EGO56444.1| hypothetical protein NEUTE1DRAFT_130400 [Neurospora tetrasperma
FGSC 2508]
Length = 513
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 173/295 (58%), Positives = 213/295 (72%), Gaps = 9/295 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G IP D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMMV +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMARLSAC 174
RA++E EK + + E LL P E+E FDSN ITPGTPFM L+A
Sbjct: 121 RAAREAMEKEEDKQKFVE-LLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +LN DP W IKVI+SDA VPGEGEHKIM+++R QR P+HDPNT+H + G D
Sbjct: 180 LRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLD 239
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPE 287
ADLIMLGLATHEP+F ++RE+ +RP C +CGQ GH+ C G E N E
Sbjct: 240 ADLIMLGLATHEPHFRVLREDVFAQDSRPRLCKICGQKGHDAMNCKGEAKEKNGE 294
>gi|440792890|gb|ELR14098.1| zinc knuckle domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 862
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/370 (50%), Positives = 236/370 (63%), Gaps = 19/370 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL ++YP V+ CVE+ E +G PNPNGMEFD+L+LDMNGIIH
Sbjct: 1 MGVPSFFRWLMKRYPHVVTDCVEE---EHSGDDDINKKLGPNPNGMEFDSLFLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
THPED PAP+ E+ MM +F I+RL IVRPRKLLY+ IDGVAPRAKMNQQRSRRF
Sbjct: 58 RATHPEDGPAPESEEAMMEVMFAFIERLVNIVRPRKLLYIGIDGVAPRAKMNQQRSRRFL 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+K E+ A+ + ADG P + FD N ITPGT FMAR + L +
Sbjct: 118 AAKHRLEEEAKA----KAEPADGGKQPAKPI----FDHNVITPGTEFMARAAEALRAHFA 169
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ DP W + VILSD+ VPGEGEHKIM++IR QR Q ++PN + G DADLI L
Sbjct: 170 RKISADPNWSPLAVILSDSCVPGEGEHKIMEFIRHQRIQEGYNPNAHMAVYGLDADLIFL 229
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS-----E 295
LA HEP F+I+REE + C VC ++GH +C L E + + E
Sbjct: 230 TLAQHEPRFSILREEVS---SVTCFVCHKVGHISTDCPQLHPEEHKHDDDDEENDEQPPE 286
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ F +V VLREYL++E +L FPYS ER +DD++ +CF GNDFLP LPS+ I EG
Sbjct: 287 LRFQWVHTQVLREYLDREFRHLSLSFPYSLERVIDDFIVICFLAGNDFLPRLPSVAIHEG 346
Query: 356 AVDRLVNLYK 365
A+D L+ YK
Sbjct: 347 AIDTLIGAYK 356
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VR+ E G++DRY KF VP + F V YV GL WV +YY+QGC SWKW++P+HY
Sbjct: 478 VRIGERGWRDRYVMQKFGVPSANREFYQGVVRAYVEGLQWVARYYWQGCVSWKWFYPYHY 537
Query: 468 APFASDFINI-----AEVDTNFE 485
P A+ +I AEV +F+
Sbjct: 538 PPMATMLEDIGRFRSAEVVASFQ 560
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 666 SPIIDFYPEDFKIDLNG--KKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI D+YP +ID++G W GV LPFVDE RL + P +L+ EE
Sbjct: 596 SPIADYYPTKIEIDMDGVSHNLEWAGVVKLPFVDENRLLAVIKPLESQLTAEE 648
>gi|255565761|ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease, putative [Ricinus communis]
Length = 993
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 192/388 (49%), Positives = 249/388 (64%), Gaps = 42/388 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF++WL KYP+VI + PNPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYKWLVNKYPNVI--------------------TSPNPNGLEFDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC HP+D P+P DE+ I++ ID +F IVRPR LLY+AIDGVAPRAKMNQQRSRRF
Sbjct: 41 PCFHPDDHPSPPTTFDEVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRF 100
Query: 120 RASKETAEKIAEVARIREKLLADG-CILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
R +K+T AE R+R++ G +LP + + S DSN ITPGT FM LS L Y
Sbjct: 101 RNAKDTEIAEAEEERLRKEYEIQGKQVLPKQYSEVS--DSNIITPGTEFMFTLSIKLQEY 158
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +N+DP WK IKVILSDA+VPGEGEHKIM +IR+QR PD++PNT+HCL G DADLI
Sbjct: 159 MISNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYNPNTRHCLYGLDADLI 218
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI-------- 290
ML LA+HE +F+I+RE Q P +C ++ + + E+
Sbjct: 219 MLALASHEVHFSILREVVLLQQ--PQSICLSAHTSLQGRIEFGEFGSSENKTKRRFSNDD 276
Query: 291 -TFGSEVEFI-----FVRLSVLREYLEKELAMPNLP--FPYSFERALDDWVFMCFFVGND 342
T +V FI F+ + +LR+YL+ E+ + + P F + ER +DD+VFMCFF GND
Sbjct: 277 NTLAKDVSFIEKPYQFLHVWILRDYLKLEMDIYDPPENFTFDSERIIDDFVFMCFFAGND 336
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTVYK 370
F+P+LP+L+I E AVD L+ +YKK K
Sbjct: 337 FIPNLPTLQIHERAVDLLMTVYKKNFKK 364
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D V+L G+K RYYE KF P D R + +Y GL WVL YY+ SW W++
Sbjct: 499 DTVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMVQKYTEGLLWVLGYYFSAVPSWTWFY 558
Query: 464 PFHYAPFASDFINIAEVDTNFETGT 488
P+H+APFASD +A+V F G+
Sbjct: 559 PYHHAPFASDMKGMAQVKFKFPKGS 583
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S IIDFYP +F+ID++GK+F WQG+ LPF+DEERL ++L+ +E++
Sbjct: 616 SSIIDFYPAEFQIDIDGKRFMWQGICKLPFIDEERLLAETKKMEKELTRKEAD 668
>gi|194892948|ref|XP_001977773.1| GG18055 [Drosophila erecta]
gi|190649422|gb|EDV46700.1| GG18055 [Drosophila erecta]
Length = 1583
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 215/547 (39%), Positives = 289/547 (52%), Gaps = 120/547 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE++ A R E+ + FDSNCITPGT FM RL L +
Sbjct: 102 FRSARE-AEQLEAKAAQRG-----------ERREHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR +AQPD DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQQCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E A+ + +DDWV M F VGNDF+PHLP + I A+
Sbjct: 244 FLLHLGLLREYLELEFDALNTAERKLDVSQLIDDWVLMGFMVGNDFIPHLPCMHISSNAL 303
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK---------------------------- 389
L Y ++Y T ENG R ++
Sbjct: 304 PLLYRTY-ISIYPTLGG-NINENGKLNLRRLQIFLSALAEVELELFKEHADDLKYMNAKT 361
Query: 390 RSFD-DVDESSEEEESNDEV--------RLWEDG------------------FKDRYYES 422
+FD DV E +E ++ + ++ +L+EDG +K YY +
Sbjct: 362 EAFDVDVAEITESQDIDSDLGALISESMKLYEDGSEEDWSDEEAVLMNELKNYKRNYYRN 421
Query: 423 KFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVD 481
KF+ P+ D+ L GH YV L WVL YYY+G +SW WY+PFHYAPF SD NI +V
Sbjct: 422 KFNRDPQSDLLEEL--GHHYVNALQWVLDYYYRGVQSWDWYYPFHYAPFISDLRNIEQVQ 479
Query: 482 TNFETGT 488
+F+ GT
Sbjct: 480 IDFQMGT 486
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYP +F+ DLNGKK W+ V L+PF+DE RL A+ P E+LS+ E E
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEEQLSLAERE 571
>gi|195479788|ref|XP_002101029.1| GE17387 [Drosophila yakuba]
gi|194188553|gb|EDX02137.1| GE17387 [Drosophila yakuba]
Length = 1581
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 212/546 (38%), Positives = 288/546 (52%), Gaps = 118/546 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEHQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE++ A R E+ + FDSNCITPGT FM RL L +
Sbjct: 102 FRSARE-AEQLEAKAAQRG-----------ERREHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR +AQPD DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRYMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E A+ + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFDALSTAERKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHISSNAL 303
Query: 358 DRL--------------------VNLYKKTVYKTQ------EQLRQEENGGGGGRGVKRS 391
L +NL++ ++ + EQ ++ + +
Sbjct: 304 PLLYRTYIRIYPTLGGNINENGKLNLHRLQIFMSALTEVELEQFKEHADDLKYMNAKTEA 363
Query: 392 FD-DVDESSEEEE--------SNDEVRLWED------------------GFKDRYYESKF 424
FD DV E +E + N+ ++L+ED +K +Y +KF
Sbjct: 364 FDIDVAEITESQNIDSDLGALINESMKLYEDDSEEDWSDEEAVLMNEFKNYKRNFYRNKF 423
Query: 425 DVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
K D L+ +GH YV L WVL YYY+G +SW WY+PFHYAPF SD NI +V
Sbjct: 424 ---KRDPQGELIEELGHHYVNALQWVLDYYYRGVQSWDWYYPFHYAPFISDLRNIEQVQI 480
Query: 483 NFETGT 488
+F+ GT
Sbjct: 481 DFQMGT 486
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYP +F+ DLNGKK W+ V L+PF+DE RL A+ P +LS+ E E
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDERRLLAAMLPCEAQLSLAERE 571
>gi|84996629|ref|XP_953036.1| exoribonuclease (XRN family member) [Theileria annulata strain
Ankara]
gi|65304032|emb|CAI76411.1| exoribonuclease (XRN family member), putative [Theileria annulata]
Length = 937
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 227/584 (38%), Positives = 302/584 (51%), Gaps = 128/584 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE----VNGQKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP F+RWL +YP V +++ + + I + K NPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNERNLDLSDEDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI-----------DGV 105
GIIHPC HPE+ P+ E+ M I + +DR+F +VRPRKL+Y+AI DGV
Sbjct: 60 GIIHPCCHPENMEQPQTEELMFNCILDYLDRIFFMVRPRKLIYLAIGNVNHDIIIFIDGV 119
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG--------SHFD 157
APRAK+NQQRSRRF++ A +A + ++ D I EK G S +D
Sbjct: 120 APRAKINQQRSRRFKS--------AALADLEDETY-DTLIKDYEKRYGKTNLIVRKSKWD 170
Query: 158 SNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQR 217
SN ITPGT FM +LS L YI DR+ WK I VI SD+NVPGEGEHKIM +IR QR
Sbjct: 171 SNVITPGTEFMYKLSEKLIEYIEDRIEKYDAWKIIVVIFSDSNVPGEGEHKIMKFIRNQR 230
Query: 218 AQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMK 275
PD+DPNT+H L G DADLIMLGLATHEPNF I+RE F N E
Sbjct: 231 HCPDYDPNTRHVLHGMDADLIMLGLATHEPNFFILREIVTFFSNPT-------TNNSEKA 283
Query: 276 ECVGLDAEPNPESVITFGSEVE------------FIFVRLSVLREYLEKELAMPNLPFP- 322
+D ++ +VE F++L VLREYL +L P L F
Sbjct: 284 IANTIDTVSKTQNTTQSSGDVEKYMKMMRENWKPLQFLQLPVLREYLSHQLRFP-LGFEN 342
Query: 323 ---YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV----------- 368
FER +DD V M FF GNDFLP+LPS+ I G++D+++ LY+K +
Sbjct: 343 GEMVDFERCIDDLVLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKILPTLEDYLSDEG 402
Query: 369 ---------------------------YKTQEQLRQE----------ENGG--------- 382
+K + Q R++ ++GG
Sbjct: 403 RLNFHTITQFFELLSKIEDETFKNIHEFKIKSQNRRQNDDSNSKVTNDSGGNSEANSSDK 462
Query: 383 GGGRGVKRSF-DDVDESSEEEESNDEVRLWEDG-------FKDRYYESKFDV----PKDD 430
GG ++ F ++ E D+V+L D +K+ YY KF++ P++
Sbjct: 463 GGEERIEDKFMKELKEKMNSSNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKTPEEI 522
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
F + +Y+ G+CWVL+YYYQGC SW WY+ +HY+PF SD
Sbjct: 523 EKFVQKLSFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDL 566
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSP+ +FYP F+ D NGK++ +Q VALLPF+DE++L K + P ++LS EE
Sbjct: 641 DSPLREFYPTKFREDPNGKRYKYQWVALLPFIDEKKLLKHVKPIEDELSEEE 692
>gi|403224058|dbj|BAM42188.1| exoribonuclease [Theileria orientalis strain Shintoku]
Length = 1230
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 236/597 (39%), Positives = 319/597 (53%), Gaps = 114/597 (19%)
Query: 1 MGVPAFFRWLSRKYPSV---IVHCVEDKPQEVNGQ-KIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP F+RWL +YP V +V D+ +++ + ++ D PNPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDLVDNYNDRNLDLSDEDQVGLDLLSPNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GIIHPC HPE+ P+ E+ M I E IDR+F +VRPRKL+Y+AIDGVAPRAK+NQQRS
Sbjct: 60 GIIHPCCHPENMEQPESEEIMFKCIVEYIDRIFYLVRPRKLIYLAIDGVAPRAKINQQRS 119
Query: 117 RRFRASK------ETAEKIAEVARIREKLLADGCI-LPPEKEKGSHFDSNCITPGTPFMA 169
RRF+++ ET EK+ ++E L + +P K K +DSN ITPGT FM
Sbjct: 120 RRFKSAALADLEDETYEKM-----LKEYLEKKNDMEIPVRKNK---WDSNVITPGTEFMY 171
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+LS + YI +R+ W+ I VI SD+NVPGEGEHKIM++IR QR PD+DPNT+H
Sbjct: 172 KLSNKIVEYIKERVEKYDAWRRIVVIFSDSNVPGEGEHKIMEFIRSQRHCPDYDPNTKHV 231
Query: 230 LCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDA-EPNPES 288
L G DADLIMLGL THEPNF I+RE P + E++E G A P ++
Sbjct: 232 LHGMDADLIMLGLTTHEPNFYILRE-IVTFYVHPSNKIAPKEFELEEPEGRSALAPKADN 290
Query: 289 VITFGSEVEFI--------FVRLSVLREYLEKELAMP---NLPFPYSFERALDDWVFMCF 337
+ ++ + ++L+VLREYL +L + FER +DD V M F
Sbjct: 291 MSKEEKYMKMMRENWKPLQLLQLAVLREYLSHQLRFVTGFDNGSSIDFERCVDDLVLMIF 350
Query: 338 FVGNDFLPH---------------------LPSLE---IREGAVD--------------- 358
F GNDFLP+ LPSL EG ++
Sbjct: 351 FCGNDFLPNLPSISITGGSIDQMILLYQKLLPSLNDYLSNEGNLNFHSISTFFHYLSKIE 410
Query: 359 ----RLVNLYKK----------------TVYKTQEQLRQEENGG-----GGGRGV--KRS 391
+ + YKK T ++ + ++ + +GG GG G K +
Sbjct: 411 NETFKQIYEYKKKSEEYHKNRSQVNPRGTTHRPENEVTKVTDGGKEGVFGGENGSVNKDA 470
Query: 392 FDDVDESSEEE----ESNDEVRLWEDG-------FKDRYYESKFDVPKDD--IAFRLMVG 438
+D + EEE +S DEV+L D +K+ YY KF + ++D F V
Sbjct: 471 EEDFMKRYEEELNKLKSVDEVKLSVDVTLNDPRLWKEAYYREKFHLTEEDDMKEFVQEVS 530
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD--FINIAEVDTNFETGTQPVNN 493
Y+ G+CWVL+YYYQGC SW WY+P+HY+PF SD F + D E + PV N
Sbjct: 531 FHYIKGICWVLRYYYQGCPSWSWYYPYHYSPFCSDLEFGTLYSYDEAEEEVSAPVEN 587
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPG---GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q M ++ IP G +SP+ DFYP F+ D NGK++ +Q VALLPF+DE
Sbjct: 740 QQLMGVMPIRSSHCIPESLRGLMTDPESPLRDFYPVKFQEDPNGKRYKYQWVALLPFIDE 799
Query: 699 ERLHKALAPYYEKLSVEE 716
E+L + P EKL+ EE
Sbjct: 800 EKLLHYVKPIEEKLNEEE 817
>gi|198471055|ref|XP_001355485.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
gi|198145746|gb|EAL32544.2| GA17195 [Drosophila pseudoobscura pseudoobscura]
Length = 1533
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 213/547 (38%), Positives = 286/547 (52%), Gaps = 118/547 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE+ + K L G E+ + FDSNCITPGT FM RL L +
Sbjct: 102 FRSARE-----AEM--LEAKALQRG-----ERREHERFDSNCITPGTDFMERLQQGLRCF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR +AQP+ DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQKCSVILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K SV E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKRA----------SV----EETRF 243
Query: 299 IFVRLSVLREYLEKELAMPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E N + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFHQLNTAQHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHISSNAL 303
Query: 358 DRL--------------------VNLYKKTVYKTQ------EQLRQEENGGGGGRGVKRS 391
L +NL + ++ T EQ ++ + G +
Sbjct: 304 PLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTALSEVELEQYKEHADDLKYANGNTEA 363
Query: 392 FD----DVDESSEEEES-----NDEVRLWE------------------DGFKDRYYESKF 424
FD D+D S + + +D +L+ +K YY +KF
Sbjct: 364 FDIDVGDIDSSKDYDSDLKALIDDSTQLYNDDSDEDLSDEEAGVLKDFQNYKRNYYRNKF 423
Query: 425 DV---PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVD 481
++ P + + L GH YV L W+L YYY+G +SW WY+PFHYAPF SD NIA V
Sbjct: 424 NLSSRPPNQLIEEL--GHHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDLNNIATVQ 481
Query: 482 TNFETGT 488
F+ GT
Sbjct: 482 IKFQLGT 488
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 32/51 (62%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+ +FYP DFK DLNGKK W+ V L+PF+DE L + P LS E
Sbjct: 521 SPLAEFYPTDFKSDLNGKKHDWEAVVLIPFIDECLLLSVMRPCEAHLSTAE 571
>gi|407420481|gb|EKF38586.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 1446
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/522 (39%), Positives = 288/522 (55%), Gaps = 79/522 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ +YP+VI PF S P DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPTVIT---------------PFRDSPP-----PVDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D A + E MM A+F +++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ + + R++ +A G +P EK+ FDSNCITPGT FM R+S L Y
Sbjct: 101 RYRSGYD-------LMVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQLQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I ++ DP W+ +V+ S + PGEGEHKI+D+IR+++ QP++ PN HC+ G DADL
Sbjct: 151 FITMKIAMDPAWQNCQVVYSGHDSPGEGEHKIVDFIRRRKMQPEYSPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P Q + E E G+ A+ ++
Sbjct: 211 VMLSLATHEPHFLLLREVVTFGPGQE---SRRAREQREEDEANGIVADK------SYRKA 261
Query: 296 VEFIFVRLSVLREYLEKEL---AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
EF+ ++VLR+YL+ ++ LP Y ER LDD+V MCFFVGNDFLP +P+L I
Sbjct: 262 DEFVLFHVNVLRDYLDLDVRGKLGAKLPANYDLERVLDDFVLMCFFVGNDFLPTIPTLGI 321
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDE---------SSEEEE 403
+G++ ++++LY K + E + G R V+ + E +EEE
Sbjct: 322 HDGSLLQMIDLYCKCILV--EGVYLTNQGQINWRAVELWLQGISELELTTIKARQQQEEE 379
Query: 404 -----------------SNDEVRLWEDGFKDRYYESK--FDVPKDDIAFRLM-VGHEYVL 443
++ + D +K+R+Y K FD D + + YV
Sbjct: 380 YQRKMTRRDPTHEAAAITSAHIESIRD-YKERFYREKHGFDKGWDPQGKEMADLRLHYVE 438
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
GL WV+ YYYQG SWKW+FP HYAP ASD +N+ + E
Sbjct: 439 GLMWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVE 480
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+ F+PE +ID + W+G+ L+PF++E L A K+ E+
Sbjct: 518 SPLKRFFPEILQIDRENARAPWEGIVLIPFIEERVLLAAYQSVQNKVEPED 568
>gi|71028722|ref|XP_764004.1| exoribonuclease [Theileria parva strain Muguga]
gi|68350958|gb|EAN31721.1| exoribonuclease, putative [Theileria parva]
Length = 958
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 305/581 (52%), Gaps = 121/581 (20%)
Query: 1 MGVPAFFRWLSRKYPSV---IVHCVEDKPQEVNG-QKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP F+RWL +YP V ++ D+ +++ I + K NPNG EFDNLYLDMN
Sbjct: 1 MGVPTFYRWLCNRYPRVPKDVIDNYNDRNLDLSDPDAIGLELLKDNPNG-EFDNLYLDMN 59
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI-----------DGV 105
GIIHPC HPE+ P+ E+ M I + +DR+F +VRPRKL+Y+AI DGV
Sbjct: 60 GIIHPCCHPENMEQPQSEEVMFTCILDYLDRIFFMVRPRKLIYLAIGNIKNYIMICIDGV 119
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG--------SHFD 157
APRAK+NQQRSRRF++ A +A + ++ D I EK G S +D
Sbjct: 120 APRAKINQQRSRRFKS--------AALADLEDETY-DTLIRDYEKRYGKTDLIVRKSKWD 170
Query: 158 SNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQR 217
SN ITPGT FM +LS L YI DR WK I VI SD+NVPGEGEHKIM +IR QR
Sbjct: 171 SNVITPGTEFMYKLSEKLMEYIEDRAERYDAWKRIVVIFSDSNVPGEGEHKIMKFIRNQR 230
Query: 218 AQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKEC 277
PD+DPNT+H L G DADLIMLGLATHEPNF I+RE + +
Sbjct: 231 HCPDYDPNTRHVLHGMDADLIMLGLATHEPNFFILREIVTFFTNP---TTNNTENAIANT 287
Query: 278 VGLDAEP--NPESVITFGSEVEFI--------FVRLSVLREYLEKELAMPNLPFP----Y 323
+ + ++P N ES ++ + F++L VLREYL +L P L F
Sbjct: 288 LNIVSKPFKNTESAEGVQKYLKMMRENWKPLQFLQLPVLREYLSHQLRFP-LGFENGEMV 346
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV--------------- 368
FER +DD V M FF GNDFLP+LPS+ I G++D+++ LY+K +
Sbjct: 347 DFERCVDDLVLMIFFCGNDFLPNLPSISITGGSIDQMLLLYQKVLPALNDYLSDEGKLNF 406
Query: 369 -----------------------YKTQEQLRQEEN----------------GGGGGRGVK 389
+K + Q R++ N G G + +
Sbjct: 407 HAITSFFELLSKIEDETFKNIHEFKMKAQSRKQNNELNSADATNDSNGHSEGTGSDKSEE 466
Query: 390 RSFDDVDESSEEEESN-----DEVRLWEDG-------FKDRYYESKF---DVPKDDI-AF 433
+D + +E N D+V+L D +K+ YY KF D +++I F
Sbjct: 467 ERIEDRFKKELKERINSCNVKDDVKLPVDVTLNDPKLWKEAYYREKFNLGDKNQEEIDKF 526
Query: 434 RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+ +Y+ G+CWVL+YYYQGC SW WY+ +HY+PF SD
Sbjct: 527 VQKLSFDYIKGICWVLQYYYQGCPSWSWYYRYHYSPFCSDL 567
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSP+ +FYP F+ D NGK++ +Q VALLPF+DE++L + P ++LS EE
Sbjct: 642 DSPLREFYPTKFREDPNGKRYKYQWVALLPFIDEKKLLTHVKPIEDELSEEE 693
>gi|336386148|gb|EGO27294.1| hypothetical protein SERLADRAFT_381861 [Serpula lacrymans var.
lacrymans S7.9]
Length = 318
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/323 (52%), Positives = 228/323 (70%), Gaps = 16/323 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-----KIPFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP ++ E++ E+ K+P + + PNPNG EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIVQSVAEEEETEMPDAEGINIKVPVNMATPNPNGTEFDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHP++KPAP+ E+EMMV IF +R+ +VRPRK+L+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIREKLL---ADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
SRRFR+++E +K E AR RE + A G + +++ +DSN ITPGTPFM L+
Sbjct: 121 SRRFRSAQEAKDK--EEAR-REAVAEWEAMGKTISDDEKNKVAWDSNAITPGTPFMDLLA 177
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y++ ++N DPGWK ++VI+SDA+VPGEGEHKIMD+IR+QR HDPN++H + G
Sbjct: 178 LSLRYWVVQKMNTDPGWKDLQVIISDASVPGEGEHKIMDFIRRQRTNVGHDPNSRHVIYG 237
Query: 233 ADADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIML LATHEP+F ++RE+ F ++ C +CG+ GH +C G+ E
Sbjct: 238 LDADLIMLALATHEPHFKVLREDVFSQDKGTGCRICGEEGHYAAQCTGVKTEIKKPPT-- 295
Query: 292 FGSEVEFIFVRLSVLREYLEKEL 314
+ FIF+ +++LREYLE EL
Sbjct: 296 --EKKPFIFLDVAILREYLEVEL 316
>gi|72391638|ref|XP_846113.1| 5'-3' exonuclease XRNA [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175631|gb|AAX69763.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei]
gi|70802649|gb|AAZ12554.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 1418
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 285/518 (55%), Gaps = 81/518 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ +YPSVI PF P DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVIT---------------PFRDFPP-----PVDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A E M+ A+F +++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E + RE+ L+ G LP E+ FDSNCITPGT FM R+S Y
Sbjct: 101 RYRSGYE-------MMVAREEALSRGEELP---EEADVFDSNCITPGTDFMVRISEHFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ DP W+ VI S + PGEGEHKI+++IR+++ QPD+ PN HC+ G DADL
Sbjct: 151 FIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
+ML LATHEP+F ++RE GQ +E D + ++ E
Sbjct: 211 VMLALATHEPHFVLLREVVTFG-------FGQESRRAREQREQDESDGIVADKSYQKPDE 263
Query: 298 FIFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ ++VLR+YL+ +E LP Y ER +DD+V MCFF+GNDFLP +P+L I +
Sbjct: 264 FVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLPSIPTLGIHD 323
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK---RSFDDVD----ESSEEEESNDE 407
G++ ++++LY + V L + G R V+ + D++ ++ E +E +
Sbjct: 324 GSLVQMLDLYAQRVLLAHTYL--TDMGRIDWRAVEGWLQGLADLEFTTIKAREAQEQEYQ 381
Query: 408 VRLWEDG------------------FKDRYYESK------FDVPKDDIA-FRLMVGHEYV 442
R+ + +KDRYY K +D +D+A RL Y+
Sbjct: 382 RRMAQQCGEHRAATISTSTVESLREYKDRYYRDKHQFAMGWDPQGEDMAKLRL----HYI 437
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
G+ WV+ YYYQG SWKWYFP HYAP ASD +N+ V
Sbjct: 438 EGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAV 475
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SP+ ++PE +ID G + W+GV L+PF++E L A ++++ EE
Sbjct: 516 KNSPLARYFPEKLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEE 568
>gi|440293117|gb|ELP86279.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 881
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/553 (37%), Positives = 291/553 (52%), Gaps = 93/553 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL +KYP +I C + + + D PN NG E DN YLDMNG+IH
Sbjct: 1 MGVPSFFRWLEKKYPKIIDAC------QGSNKTDHTDLDSPNLNGFEIDNFYLDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+PAP D+M++ + +D + IVRPRKL+YMA+DGVAPRAKMNQQR+RRF+
Sbjct: 55 PCFHPQDRPAPDTIDDMLIMLKRYLDYIIDIVRPRKLVYMAVDGVAPRAKMNQQRARRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADG----CILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
A+++ K + L+ G I P DSNCITPGT FM R++ L
Sbjct: 115 AARDAQSKEEYDEQKNITLIQQGHSPIAIKPT-------LDSNCITPGTVFMERVTETLK 167
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+ +R++ WK + VI+SDA+VPGEGEHKIM+YIRKQ+ QP+++PN HC+ G DAD
Sbjct: 168 EYVKERISTSAYWKKLVVIISDASVPGEGEHKIMEYIRKQKDQPNYNPNIHHCIYGLDAD 227
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECV------GLDAEPNPESVI 290
LIML LATHE F+IIRE+ PC +CGQ GH C +D P
Sbjct: 228 LIMLTLATHERKFSIIREQVFFEHV-PCYICGQQGHAPDRCSHKGEIGAMDPIRKP---- 282
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPF-------------------PYS-----FE 326
F+F+ +LREYL K + + F P+S E
Sbjct: 283 -------FLFLHCHILREYLSKTIRIEGFDFERIIDDFIFFCFFVGNDFLPHSPSLEIRE 335
Query: 327 RALDDW--VFMCFFVGNDFLPHLPSLEIREGA-VDRLVNLYKKTVYKTQEQLRQEENGGG 383
++D V+M F N +L +L LV ++ + +++ +
Sbjct: 336 GSIDMLMEVYMKFLPENGYLTDSGTLNATHAKNFMSLVGQREQRILQSKSEKESRFRINR 395
Query: 384 GGRGVKRSFDD----VDESSE-----------------------EEESNDEVRLWEDGFK 416
G+ + R FDD V S E E+E ++++ +G++
Sbjct: 396 KGKMI-REFDDKISAVLGSGEDQAIKDLKLKHLKLDKENFLKGIEKEESEDINYSMNGYQ 454
Query: 417 DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
+YY SK + A +V +EY +GL WVLKYYYQGC+ W WYFP+ YAPF +D
Sbjct: 455 AKYYASKLKIEYPSEAMTQLV-NEYFIGLSWVLKYYYQGCQCWDWYFPYLYAPFIADVAT 513
Query: 477 IAE--VDTNFETG 487
+ ++ FE G
Sbjct: 514 YLDNTLEPKFELG 526
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI +FYPE F ID+NGK + V LL F+D+ +L + L P ++L +E
Sbjct: 560 SPIKEFYPEKFAIDMNGKTQEYLAVILLSFIDQNKLLEVLKPLEKQLQGQE 610
>gi|261329673|emb|CBH12655.1| 5'-3' exonuclease XRNA, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1418
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 204/518 (39%), Positives = 285/518 (55%), Gaps = 81/518 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ +YPSVI PF P DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVIT---------------PFRDFPP-----PVDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A E M+ A+F +++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHPNDADATHKAPTEKAMVEAMFSYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E + RE+ L+ G LP E+ FDSNCITPGT FM R+S Y
Sbjct: 101 RYRSGYE-------MMVAREEALSRGEELP---EEADVFDSNCITPGTDFMVRISEHFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ DP W+ VI S + PGEGEHKI+++IR+++ QPD+ PN HC+ G DADL
Sbjct: 151 FIMMKMSTDPAWQNCSVIYSGHDHPGEGEHKIVEFIRRRKMQPDYGPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
+ML LATHEP+F ++RE GQ +E D + ++ E
Sbjct: 211 VMLALATHEPHFVLLREVVTFG-------FGQESRRAREQREQDESDGIVADKSYQKPDE 263
Query: 298 FIFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ ++VLR+YL+ +E LP Y ER +DD+V MCFF+GNDFLP +P+L I +
Sbjct: 264 FVLFHVNVLRDYLDLEVRERLGDKLPTNYDLERVVDDFVLMCFFIGNDFLPSIPTLGIHD 323
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK---RSFDDVD----ESSEEEESNDE 407
G++ ++++LY + V L + G R V+ + D++ ++ E +E +
Sbjct: 324 GSLVQMLDLYAQRVLLAHTYL--TDMGRIDWRAVEGWLQGLADLEFTTIKAREAQEQEYQ 381
Query: 408 VRLWEDG------------------FKDRYYESK------FDVPKDDIA-FRLMVGHEYV 442
R+ + +KDRYY K +D +D+A RL Y+
Sbjct: 382 RRMAQQCGEHRAATISTSTVESLREYKDRYYRDKHQFAMGWDPQGEDMAKLRL----HYI 437
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
G+ WV+ YYYQG SWKWYFP HYAP ASD +N+ V
Sbjct: 438 EGIMWVIGYYYQGPPSWKWYFPHHYAPMASDLVNLPAV 475
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++SP+ ++PE +ID G + W+GV L+PF++E L A ++++ EE E
Sbjct: 516 KNSPLARYFPEKLQIDREGTRAPWEGVVLIPFIEERTLLAAYETVQDRVTPEERE 570
>gi|367035618|ref|XP_003667091.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
gi|347014364|gb|AEO61846.1| hypothetical protein MYCTH_109078 [Myceliophthora thermophila ATCC
42464]
Length = 561
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 162/293 (55%), Positives = 214/293 (73%), Gaps = 8/293 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E+KP + +G +P D+++PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSAKYPKIISPVIEEKPLVLEDGTVVPVDTTQPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPEDKPAP+DE+EMM+ +F+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDKPAPRDEEEMMIEVFKYTDRVVNMVRPRKVLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMARLSAC 174
RA+++ EK ++ + L + ++E FDSN ITPGTPFM L+A
Sbjct: 121 RAAQDAKEKEEGKQQLLKMLKKENGSDATKEESVEAVVKKAFDSNSITPGTPFMDILAAS 180
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +LN DP W +KVI+SDA VPGEGEHKIM+++R QR P+HDPNT+H + G D
Sbjct: 181 LRYWCAYKLNTDPAWAKLKVIISDATVPGEGEHKIMEFVRSQRNSPEHDPNTRHVIYGLD 240
Query: 235 ADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
ADLIMLGLATHEP+F ++RE+ F+ ++ R C +CGQ GH+ + C G E N
Sbjct: 241 ADLIMLGLATHEPHFRVLREDVFFQQSKPRLCKLCGQTGHDERNCKGEAKEKN 293
>gi|449019490|dbj|BAM82892.1| 5'->3' exoribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1363
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 198/414 (47%), Positives = 252/414 (60%), Gaps = 44/414 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQE-----VNGQKIP------FDSSKPNPNGMEFD 49
MG+ +FFRW+ +YP + VE+ P NG + D S PNPNG EF
Sbjct: 1 MGIASFFRWVVARYPRALQAAVEEAPVTDQAALENGNYLDDNDYLHVDVSLPNPNGEEFS 60
Query: 50 NLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 109
NLY D+NG++H CTHPED+P P E++M +F +DR+ +VRPR+L+Y+AIDGVAPRA
Sbjct: 61 NLYFDLNGVVHMCTHPEDRPPPATEEDMFQDVFRYMDRIVALVRPRRLIYIAIDGVAPRA 120
Query: 110 KMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMA 169
K+NQQR+RRFRA+KE EK E ++R G +PP+ +K FDSN ITPGT FM
Sbjct: 121 KINQQRTRRFRAAKEAREKTEEEEKLRALWREQGLRVPPKPKKP--FDSNVITPGTLFME 178
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
RL+ L YI +R+ + P W+ + VILSDA+VPGEGEHKI ++IR QRAQP +DP T+H
Sbjct: 179 RLAVALRRYIRERIRSCPAWRSLVVILSDASVPGEGEHKIAEFIRTQRAQPGYDPETRHV 238
Query: 230 LCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQM-------GHEMKECVGL 280
L G DADLIML LATHEP+F I+RE F + M G + G
Sbjct: 239 LYGLDADLIMLALATHEPHFFILRERIYFDSRADKAIQAVKAMNAQQTPAGDRIDHKTGT 298
Query: 281 DAEPN---PESVITFGSEVEFIFVRLSVLREYLEKEL-------AMPNLPFPYSFERALD 330
A P PE F F R+ LREYL+ E A+ P E ALD
Sbjct: 299 SAGPGLPLPER--------PFDFFRIDRLREYLQAEFRDALQHDAVRQPREPLDVEIALD 350
Query: 331 DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGG 384
D+VF+CFFVGNDFLPHLPSLEIREGA+D L+ +YK YK Q ++ +G GG
Sbjct: 351 DFVFLCFFVGNDFLPHLPSLEIREGAIDFLLEVYK---YKFQ-RIGHLTDGHGG 400
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 406 DEVRLWEDGFKDRYYESKF------DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
D VR G+++RYY+SKF D A + + Y GL WV +YYY GC SW
Sbjct: 804 DPVRFHLPGWRERYYQSKFPHWPPLDTEAGAQALQRLC-RAYYEGLLWVYRYYYAGCPSW 862
Query: 460 KWYFPFHYAPFASDFIN--IAEVDTNFETGT 488
W++P+HYAP ASD + + D FE G
Sbjct: 863 GWFYPYHYAPLASDLAQCCVDQKDIVFERGA 893
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
SPII++YP DF ID NGK+FAWQGVALLPFVDE+RL A+
Sbjct: 927 SPIIEYYPTDFAIDYNGKRFAWQGVALLPFVDEQRLRLAI 966
>gi|156084528|ref|XP_001609747.1| XRN 5'-3' exonuclease protein [Babesia bovis T2Bo]
gi|154796999|gb|EDO06179.1| XRN 5'-3' exonuclease protein, putative [Babesia bovis]
Length = 988
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 222/583 (38%), Positives = 295/583 (50%), Gaps = 108/583 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSS-----KPNPNGMEFDNLYLDM 55
MGVP F+RWL +YP V VH +D E N +S PNPNG EFDNLY+DM
Sbjct: 1 MGVPTFYRWLCSRYPRV-VHDAKDDSNENNFDFSDLESYGLALLSPNPNG-EFDNLYIDM 58
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NG+IHPC HPE P E+ M IF+ +DRL I+RPRK+L++AIDGVAPRAKMNQQR
Sbjct: 59 NGLIHPCCHPEGLEQPPSEEVMFQCIFDYLDRLMYIIRPRKILFLAIDGVAPRAKMNQQR 118
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRF+++ E + +++ + +PP K S +DSN ITPGTPFM LS +
Sbjct: 119 SRRFKSAAEADLEAEIYSKVAAEFAQRNVRIPP---KESRWDSNVITPGTPFMHELSKRV 175
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YI +R + W I VI SDAN PGEGEHKIM++IR QR +DPNT+H L G DA
Sbjct: 176 VAYIKERRDMYEAWSRIHVIYSDANSPGEGEHKIMNFIRNQRHSDQYDPNTKHVLHGMDA 235
Query: 236 DLIMLGLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DLIMLGLATHE NF IIRE P + ++ + V + P + + ++
Sbjct: 236 DLIMLGLATHEVNFYIIREIVSNLNPTKKAEDEIRKSIA------VAQTSRPQLKDIKSY 289
Query: 293 GSEVE-----FIFVRLSVLREYLEKELAMP-----NLPFPYSFERALDDWVFMCFFVGND 342
S + F+RL VLREYL +L P P FER +DD V MCFF GND
Sbjct: 290 RSMLRQNWKPLQFLRLPVLREYLSHQLYFPRGWSRGNSGPIDFERCIDDLVLMCFFCGND 349
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTV---------------------------------- 368
FLPHLPS+ I+ G++D+++ LY+ +
Sbjct: 350 FLPHLPSISIQGGSIDQMILLYQSLLPDLGDYLTNEGEINFPQLGAFVSYIANVEDQVFK 409
Query: 369 ----YKTQEQLRQEENGGGGGRG---VKRSFDDVDESSEEEESNDEVRLWEDG----FKD 417
+K ++++R+ ++ G V R D + E N + +G FK
Sbjct: 410 AEQEFKQRQKMRRLQHSGDNTENKDQVSRPTDFDNAGGETVLKNQDSSTLNNGLEIEFKK 469
Query: 418 R-----YYESKFDVPKDDIAFRLM-------VGHEYVLGLC-----W-----VLKYYYQG 455
R E + D P + I L + GLC W V +Y +G
Sbjct: 470 RCAELLKQEREVDDPVEPIDLSLNDPVRWKETYYRKKFGLCESQDVWEFASQVANHYIKG 529
Query: 456 -----------CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
C SW WY+PFHYAPF SD +N ++ F+ G
Sbjct: 530 MCWVLRYYYQGCTSWGWYYPFHYAPFCSD-LNFEGLEFTFDYG 571
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
DSPI DFYP F D NGK++ +Q VALLPF+DE++L + P
Sbjct: 604 DSPIADFYPIKFDEDPNGKRYKYQWVALLPFIDEKKLLNLVIP 646
>gi|167376304|ref|XP_001733946.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165904779|gb|EDR29935.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 889
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/422 (43%), Positives = 263/422 (62%), Gaps = 26/422 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLS+K+P +I C ++ N D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLSQKFPKIIDSCQGSFHEQYN------DLNEPNFNGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D L IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++KE + + A + +G PE DSNCITPGT FM+ +S L YI
Sbjct: 115 SAKEVDDNERKQAEENRNRVMNGL---PEIPYVRPLDSNCITPGTEFMSAVSKALKKYIK 171
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PN HC+ G DADLIML
Sbjct: 172 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIML 231
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-FI 299
LATHE F+IIRE+ Q + C +C + H +C P+ + V + ++ F
Sbjct: 232 SLATHERFFSIIREKVFFEQEQ-CYICNGI-HSPDKC------PHRKEVGALDTIIKPFQ 283
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
F+ +LR YL+ L + + FER +DD++F CF VGNDFLPH+PSL+IR+GAVD
Sbjct: 284 FLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDL 339
Query: 360 LVNLYKKTV----YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF 415
L+ +Y++ + Y T+ N R V + + E+ ++E N R ++
Sbjct: 340 LMKVYREFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILETRNKKEKNYAKRRLDNQI 399
Query: 416 KD 417
+D
Sbjct: 400 RD 401
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVE 715
SPI +FYP+ F++D NG+K ++ +A+L F+D+E+L + P +L+ E
Sbjct: 578 SPISEFYPDTFELDFNGEKVDYKAIAVLNFIDQEKLLHYVEPIEMELTGE 627
>gi|195345705|ref|XP_002039409.1| GM22742 [Drosophila sechellia]
gi|194134635|gb|EDW56151.1| GM22742 [Drosophila sechellia]
Length = 1585
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 214/546 (39%), Positives = 285/546 (52%), Gaps = 119/546 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P++L ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQEIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE++ A R E + FDSNCITPGT FM RL L +
Sbjct: 102 FRSARE-AEQLETKAAQRG-----------EWREHERFDSNCITPGTVFMGRLQKGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS VPGEGEHKIMDYIR +AQPD DPNT+HC+ G DADLI
Sbjct: 150 LKTKISTDPLWQRCSVILSGQEVPGEGEHKIMDYIRYMKAQPDFDPNTRHCIYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E A+ + + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFDALRTVEHKLDVAQLIDDWVLMGFLVGNDFIPHLPCLHISSNAL 303
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK---------------------------- 389
L Y + +Y T ENG R ++
Sbjct: 304 PLLYRTYIR-IYPTLGG-NINENGKLNLRRLQIFMSALTEVELEHFKEHADEIKYMNSKT 361
Query: 390 RSFD-DVDESSEEEESNDE------------------------VRLWE-DGFKDRYYESK 423
+FD DVDE +E + + + V L E + +K +Y +K
Sbjct: 362 DTFDTDVDEITESQNHDSDLGALINKSMMLYDDDSEEDCSDEAVLLKEFENYKRNFYRNK 421
Query: 424 FDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
F P+ D+ L GH YV L WVL YYY+G +SW WY+PFHY+PF SD NI +V+
Sbjct: 422 FKRDPQSDLLEEL--GHHYVNALQWVLDYYYRGVQSWDWYYPFHYSPFISDLKNIEQVEI 479
Query: 483 NFETGT 488
F GT
Sbjct: 480 AFHLGT 485
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ DFYP +F+ DLNGKK W+ V L+PF+DE RL A+ P +LS+EE E
Sbjct: 518 SPLADFYPLEFESDLNGKKHDWEAVVLIPFIDERRLLNAMLPCEAQLSLEERE 570
>gi|183233323|ref|XP_001913842.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801637|gb|EDS89385.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 869
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 238/374 (63%), Gaps = 36/374 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL +++P +IV C + QE G D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC-QPSSQEKYG-----DLNEPNANGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D + IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ A +K L +G PE DSNCITPGT FM+ +S L YI
Sbjct: 115 SAKDAENAELRQAEDNKKRLMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIK 171
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PN HC+ G DADLIML
Sbjct: 172 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIML 231
Query: 241 GLATHEPNFTIIREE--------FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
LATHE F+I+RE+ + N P D C KE +D P
Sbjct: 232 SLATHERFFSIVREKVFFEDDRCYICNGVHPPDKC----QRRKEVGAMDTIIKP------ 281
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F F+ +LR YL+ L + + FER +DD++F CF VGNDFLPH+PSL+I
Sbjct: 282 -----FQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDI 332
Query: 353 REGAVDRLVNLYKK 366
R+GAVD L+ +Y++
Sbjct: 333 RDGAVDLLMKVYRE 346
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 342 DFLPHLPSLEIREGAVDRLVNLYKKT------VYKTQEQLRQEENGGGGGRGVKRSFDDV 395
+F + LE+R+ + + +N K T + QEQL+ +E + +++ + +
Sbjct: 394 NFDNQMKQLEMRKATIYK-INTLKSTEGMNELTPEQQEQLKTQE---AEIKLIEQKENRL 449
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
E ++ E+ D +++ E G+ RYY KF + PK D + H Y G+ WVL YYY+
Sbjct: 450 KERLKKAETKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIRDIVHSYFEGMNWVLGYYYK 509
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
GC+SW WY+P+ YAPFA D VD NFE
Sbjct: 510 GCQSWDWYYPYLYAPFAEDMGEY--VDDNFE 538
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
SPI +FYP+ FK+D NG+K ++ + +L F+D+E+L + P +KL
Sbjct: 578 SPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKL 624
>gi|449709403|gb|EMD48677.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 869
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 238/374 (63%), Gaps = 36/374 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL +++P +IV C + QE G D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC-QPSSQEKYG-----DLNEPNANGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D + IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ A +K L +G PE DSNCITPGT FM+ +S L YI
Sbjct: 115 SAKDAENAELRQAEDNKKRLMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKRYIK 171
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PN HC+ G DADLIML
Sbjct: 172 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIML 231
Query: 241 GLATHEPNFTIIREE--------FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
LATHE F+I+RE+ + N P D C KE +D P
Sbjct: 232 SLATHERFFSIVREKVFFEDDRCYICNGVHPPDKC----QRRKEVGAMDTIIKP------ 281
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F F+ +LR YL+ L + + FER +DD++F CF VGNDFLPH+PSL+I
Sbjct: 282 -----FQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDI 332
Query: 353 REGAVDRLVNLYKK 366
R+GAVD L+ +Y++
Sbjct: 333 RDGAVDLLMKVYRE 346
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 342 DFLPHLPSLEIREGAVDRLVNLYKKT------VYKTQEQLRQEENGGGGGRGVKRSFDDV 395
+F + LE+R+ + + +N K T + QEQL+ +E + +++ + +
Sbjct: 394 NFDNQMKQLEMRKATIYK-INTLKSTEGMNELTPEQQEQLKTQE---AEIKLIEQKENRL 449
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
E ++ E+ D +++ E G+ RYY KF + PK D + H Y G+ WVL YYY+
Sbjct: 450 KERLKKAETKDLLKMGEVGYTQRYYSVKFKIDPKKDTQKIRDIVHSYFEGMNWVLGYYYK 509
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
GC+SW WY+P+ YAPFA D VD NFE
Sbjct: 510 GCQSWDWYYPYLYAPFAEDMGEY--VDDNFE 538
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
SPI +FYP+ FK+D NG+K ++ + +L F+D+E+L + P +KL
Sbjct: 578 SPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKL 624
>gi|320586314|gb|EFW98993.1| RasGAP [Grosmannia clavigera kw1407]
Length = 3016
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/378 (48%), Positives = 234/378 (61%), Gaps = 66/378 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I VE +PQ + +G IP D+S PNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVVEQQPQTMEDGTIIPVDTSGPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMM+ IF DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMLEIFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLL-ADGCILPPEKEKGS---HFDSNCITPGTPFMARLSACL 175
R+++E EK + + + L +G +LP E + + FDSN ITPGTPFM L+A L
Sbjct: 121 RSAQEAQEKEEDKKELLKLLKQQNGGVLPTETLETAAKKAFDSNSITPGTPFMDILAASL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ H + G DA
Sbjct: 181 RYW-------------------------------------------------HVIYGLDA 191
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DLIML LATHEP F ++RE+ F+ ++AR C +CGQ GHE C G E + E F
Sbjct: 192 DLIMLSLATHEPYFRVLREDVFFQDSKARTCRLCGQKGHEASACKGEVKEKDGE----FD 247
Query: 294 SEVE------FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ + FI++ +SVLREYL EL +P LPF + ERA+DDW+F+C FVGNDFLPHL
Sbjct: 248 EKDKEHPLKPFIWLHVSVLREYLAVELDVPGLPFRWDLERAIDDWIFLCCFVGNDFLPHL 307
Query: 348 PSLEIREGAVDRLVNLYK 365
P+LEIRE ++ L L+K
Sbjct: 308 PALEIRENGINTLTGLWK 325
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 383 GGGRGVKRSFDDVDES-SEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
GGG S ++ + EE D VR+W++G+ +RYYE KF V D+ FR V Y
Sbjct: 506 GGGESTPASGASTPKAVASEEGPVDTVRMWDEGYANRYYEQKFHVDPRDVEFRHGVARSY 565
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
V GL WVL YY+QGC SW+WY+P+HYAPFA+DF+++ ++D F+ G
Sbjct: 566 VEGLAWVLLYYFQGCPSWEWYYPYHYAPFAADFVDLGKMDLVFQKG 611
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DS IIDFYP DF IDLNGKKFAWQGVALLPF+D +RL A+ Y LS E+
Sbjct: 643 EDSEIIDFYPVDFDIDLNGKKFAWQGVALLPFIDMKRLLAAVEKKYPLLSPED 695
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMK 644
G++T G V LER Q IM L ED IF++R+Q E R + KRR Q K
Sbjct: 333 GYVTKDGHVDLERAQYIMSGLAKQEDGIFRRRKQQE---DRREENAKRRRLQEK 383
>gi|407040013|gb|EKE39937.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 560
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 177/374 (47%), Positives = 240/374 (64%), Gaps = 36/374 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL +++P +IV C KP + Q+ D ++PN +G+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIVDC---KP---SSQEKYGDLNEPNASGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D + IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPEKIEDMMVLLTRYLDYIIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ A +K L +G PE DSNCITPGT FM+ +S L YI
Sbjct: 115 SAKDAENAELRQAEDNKKRLMNGL---PEVPYVKPLDSNCITPGTEFMSVVSKTLKKYIK 171
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PNT HC+ G DADLIML
Sbjct: 172 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADLIML 231
Query: 241 GLATHEPNFTIIREE--------FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
LATHE F+IIRE+ + N P D C KE +D P
Sbjct: 232 SLATHERFFSIIREKVFFEDDRCYICNGVHPPDKC----QRRKEVGAMDTIIKP------ 281
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F F+ +LR YL+ L + + FER +DD++F CF VGNDFLPH+PSL+I
Sbjct: 282 -----FQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDI 332
Query: 353 REGAVDRLVNLYKK 366
R+GAVD L+ +Y++
Sbjct: 333 RDGAVDLLMKVYRE 346
>gi|407036374|gb|EKE38129.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 572
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 299/562 (53%), Gaps = 101/562 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLS+K+P +I C ++ N D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLSQKFPKIIDGCQGSFHEQYN------DLNEPNFNGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D L IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ + A + +G PE DSNCITPGT FM+ +S L YI
Sbjct: 115 SAKDAENAELKHAEENRNKVMNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIK 171
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PNT HC+ G DADLIML
Sbjct: 172 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNTHHCMYGLDADLIML 231
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-FI 299
LATHE F+IIRE+ Q + C +C + H +C P+ + + + + F
Sbjct: 232 SLATHERFFSIIREKVFFEQEQ-CYICNDI-HSPDKC------PHRKDIGAMDTITKPFQ 283
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERAL------------------------DDWVFM 335
F+ +LR YL+ L + + FER + D V +
Sbjct: 284 FLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDL 339
Query: 336 CFFVGNDFLPH-------------------------LPSL------------------EI 352
V +FLPH P++ +I
Sbjct: 340 LMKVYREFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKNYAKRRLDNQI 399
Query: 353 REGAVDRLVNLYKKTVYKTQEQL-----RQEENGGGGGRGVKRSFDD---VDESSEEEES 404
R+ + + N+Y+ + K+ E + Q+E +K+ D+ + E++E
Sbjct: 400 RDLEIKK-ANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKLRADFEQKEL 458
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
DEV+L E G+ RYY KF + PK D + H Y G+ WVL YYY+GC+SW WY+
Sbjct: 459 TDEVKLGEPGYTQRYYSVKFKINPKQDTQKIRDIVHSYFEGMNWVLGYYYKGCQSWDWYY 518
Query: 464 PFHYAPFASDFINIAEVDTNFE 485
P+ YAPFA D VD NFE
Sbjct: 519 PYLYAPFAEDMGEY--VDYNFE 538
>gi|195398773|ref|XP_002057995.1| GJ15840 [Drosophila virilis]
gi|194150419|gb|EDW66103.1| GJ15840 [Drosophila virilis]
Length = 1656
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 284/547 (51%), Gaps = 120/547 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ I+ ID+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEPQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE+ + K L G E+ + FDSNCITPGT FMARL L +
Sbjct: 102 FRSARE-----AEM--LEAKALQRG-----ERREHERFDSNCITPGTEFMARLQLGLRCF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ ++ILS PGEGEHKIMDYIR +AQP+ DPNT+HCL G DADLI
Sbjct: 150 LRTKISTDPLWQKCRIILSGQETPGEGEHKIMDYIRYMKAQPNFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKELAMPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E + P + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFHQLSTPEQKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHISSNAL 303
Query: 358 DRLVNLYKK-------------------------TVYKTQEQLRQEENGGGGGRGVKRSF 392
L Y + + + + QL +E + K
Sbjct: 304 PLLYKTYIRIYRQLGGNINEHGKLNLERLEQFMHALSEVELQLFEEHSDDLKYMNAKTEA 363
Query: 393 DDVD---------------------------ESSEEEESNDE---VRLWEDGFKDRYYES 422
DVD E +E+ DE +R +K YY +
Sbjct: 364 FDVDVAELKNGSFDGYSDDLAALIDNSMKLYEGDSDEDFGDEQTSLRSEFQNYKRNYYRN 423
Query: 423 KFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
KF K+++ L+ +G+ YV + WVL YYY+G +SW WY+P+HYAPF SD NI ++
Sbjct: 424 KF---KNEMHSDLIAELGYHYVTAMQWVLDYYYRGVQSWDWYYPYHYAPFISDLTNIKDI 480
Query: 481 DTNFETG 487
NF+ G
Sbjct: 481 RINFKLG 487
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SP+ +FYP +F+ DLNGKK W+ V L+PF++E+RL +A++ L+ EE
Sbjct: 520 NSPLAEFYPTEFESDLNGKKHDWEAVVLIPFIEEDRLLRAMSACEPLLNSEE 571
>gi|195133694|ref|XP_002011274.1| GI16439 [Drosophila mojavensis]
gi|193907249|gb|EDW06116.1| GI16439 [Drosophila mojavensis]
Length = 1816
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 209/550 (38%), Positives = 284/550 (51%), Gaps = 125/550 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ I+ ID+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDSNIHFHLEETQIFQDIYNYIDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE++ AR R EK + FDSNCITPGT FM RL A L +
Sbjct: 102 FRSARE-AEQLEAKARQRG-----------EKREHERFDSNCITPGTEFMVRLQAGLRCF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ +VILS PGEGEHKIMDYIR +AQP DPNT+HCL G DADLI
Sbjct: 150 LRTKISQDPLWQKCRVILSGQETPGEGEHKIMDYIRYMKAQPTFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ L +LREYLE EL+ P + +DDWV M F VGNDF+PHLP L I
Sbjct: 244 FLLHLGLLREYLELEFHELSTPEQKL--DVAQLIDDWVLMGFMVGNDFIPHLPCLHISSN 301
Query: 356 AVDRL----VNLYKK---------------------TVYKTQEQLRQEENG-----GGGG 385
A+ L + +YK+ + + + QL +E +
Sbjct: 302 ALPLLYKTYIRIYKQLGGNINEHGKLNLDRLQQFLHALSEVELQLFEEHSDDLKYMNAKT 361
Query: 386 RGVKRSFDDVDESSEEEESND-------EVRLWE-------------------DGFKDRY 419
DD+ S E + D ++L+E +K Y
Sbjct: 362 EAFDVDIDDIKNDSGESYNEDLAALIDESMKLYEDDDDDVDPDDEQAVLRSEFQNYKRNY 421
Query: 420 YESKFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y +KF K+++ L+ + + Y+ + WVL YYY+G +SW WY+PFHYAPF SD NI
Sbjct: 422 YRNKF---KNEMHEDLISELSYHYISAIQWVLDYYYRGVQSWDWYYPFHYAPFISDLNNI 478
Query: 478 AEVDTNFETG 487
NF+ G
Sbjct: 479 KNTKVNFKMG 488
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SP+ +FYP +F+ DLNGKK W+ V L+PF++E+RL A+A +LSVEE E
Sbjct: 521 NSPLAEFYPTEFESDLNGKKHDWEAVVLIPFIEEKRLLSAMADCEPQLSVEERE 574
>gi|209877046|ref|XP_002139965.1| 5'-3' exoribonuclease [Cryptosporidium muris RN66]
gi|209555571|gb|EEA05616.1| 5'-3' exoribonuclease, putative [Cryptosporidium muris RN66]
Length = 1148
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 187/422 (44%), Positives = 243/422 (57%), Gaps = 62/422 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F++WL +YP ++ E ++ KI D + P+ NG EFD LYLDMNGIIH
Sbjct: 1 MGVPTFYKWLCSRYPLIVRSLKESITEDNVNSKI--DLTLPSENG-EFDCLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P AP +E EM + + IDRLF ++RPR+LLY+AIDGVAPRAKMNQQRSRR++
Sbjct: 58 PCCNPISSIAPINEAEMFTRVCDYIDRLFSMIRPRRLLYLAIDGVAPRAKMNQQRSRRYK 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
S E + + +++ G PP KEK +DSN ITPGTPFM RLSACL YI
Sbjct: 118 TSMEIENLMQAYSEAKQEFEKLGYKCPPYKEK---WDSNLITPGTPFMERLSACLQVYIR 174
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+ ++P WK + VI SDAN+PGEGEHKI+D+IRKQR ++DPNT+H L GADADLIML
Sbjct: 175 QKYESEPAWKTLSVIFSDANIPGEGEHKILDFIRKQRCNSNYDPNTRHVLYGADADLIML 234
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE----- 295
GL+THE NF I+RE N +C + E +D N + I FG
Sbjct: 235 GLSTHEQNFFIVRESI-TNDDGASQICHLYNKLLTEN-SIDKSVNANNRIRFGPNNSSNL 292
Query: 296 ------VEFIFVRLSVLREYL---------------EKELAMPNLP-------------- 320
+ + LSVLREYL EK + N P
Sbjct: 293 RIYSWWKDLEMIDLSVLREYLAYEFKELEEKLSINREKYIENSNNPECTISTEIHEQDNN 352
Query: 321 --------------FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
F Y ER +DD+VF+CFFVGNDFLP+LP+ I +G++D+L+ +Y K
Sbjct: 353 MKYSKINEKLYNSKFYYDLERCIDDFVFLCFFVGNDFLPNLPAFGIHKGSLDQLLAIYIK 412
Query: 367 TV 368
+
Sbjct: 413 VL 414
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 416 KDRYYESKFDVPKDDI---------AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+D E+ D+ K+ I F VG+ Y+ GL WVLKYYY G SW W++P+H
Sbjct: 543 QDETIENNLDIDKETIDNNLYQKLSEFSREVGYHYIRGLSWVLKYYYHGVPSWDWFYPYH 602
Query: 467 YAPFASDFINIAEVD 481
YAP D N+A D
Sbjct: 603 YAPLVVDLANMAASD 617
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 662 APQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
+ + SP+ +FYP+ FK D NG K W+ + LLPF+++E+L + + P
Sbjct: 705 SDEKSPLKEFYPDKFKEDPNGNKQRWKWIVLLPFINQEKLLEHVKP 750
>gi|167383239|ref|XP_001736453.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165901153|gb|EDR27303.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 858
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 217/569 (38%), Positives = 305/569 (53%), Gaps = 115/569 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWL +++P +I C + QE G D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 1 MGVPSFFRWLKQRFPKIIDDC-QPSSQEKYG-----DLNEPNTNGVEYDNFYIDMNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ A + ++MMV + +D L IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 55 PCLHPQDRQAAESVEDMMVLLTRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 114
Query: 121 ASK--ETAE-KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
++K E AE K AE R R K +G PE FDSNCITPGT FM+ +S L
Sbjct: 115 SAKDAENAELKQAEENRNRAK---NGL---PEIPYVRPFDSNCITPGTEFMSVVSKTLKK 168
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
YI +R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PN HC+ G DADL
Sbjct: 169 YIKERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADL 228
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
IML LATHE F+I+RE+ F+ +Q C +C ++ H +C P+ + V +
Sbjct: 229 IMLSLATHERFFSIVREKVFFEQDQ---CYICNKI-HPPDKC------PHRKEVGALDTI 278
Query: 296 VE-FIFVRLSVLREYLEKELAMPNLPFPYSFERAL------------------------D 330
++ F F+ +LR YL+ L + + FER + D
Sbjct: 279 IKPFQFLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPRIPSLDIRD 334
Query: 331 DWVFMCFFVGNDFLPH------------------LPSLEIREGAV--------------- 357
V + V +FLPH L + E A+
Sbjct: 335 GGVDLLMKVYREFLPHGGYITESGSLNVTNAKNFLREVGKEEPAILEKKYQKEKMNAKKN 394
Query: 358 ---------DRLVNLYKKTVYKT-----------QEQLRQEENGGGGGRGVKRSFDDVDE 397
R ++Y+ + K+ QEQL+ +E + +++ + + E
Sbjct: 395 FDNQMKQLESRKASIYENSTLKSTESINSLTPEQQEQLKIQE---AEIKSIEQRENRLKE 451
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++ E D +++ E G+ RYY KF + PK D + H Y G+ WVL YYY+GC
Sbjct: 452 RFKKAEEKDLLKMGESGYTQRYYNVKFKINPKKDTQKVRDIVHSYFEGMNWVLGYYYKGC 511
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
+SW WY+P+ YAPFA D VD NFE
Sbjct: 512 QSWDWYYPYLYAPFAEDMGEY--VDYNFE 538
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
SPI +FYP+ FK+D NG+K ++ + +L F+D+E+L + P +KL
Sbjct: 578 SPISEFYPDTFKLDFNGEKVDYKAIVVLTFIDQEKLLHYVKPIEKKL 624
>gi|118355816|ref|XP_001011167.1| XRN2 [Tetrahymena thermophila]
gi|89292934|gb|EAR90922.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1065
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 183/401 (45%), Positives = 241/401 (60%), Gaps = 40/401 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL + P I+ E+ + FD+ NP E DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPQFILDAHENYEE--------FDAESNNP---EIDNLYLDMNGIIH 49
Query: 61 PCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC + P +M IF +D+L + RP+K+LYMAIDGVAPRAKMNQQR+RR
Sbjct: 50 PCCRSDGSVVPIAHTIQDMFNNIFLYVDKLMDLCRPKKILYMAIDGVAPRAKMNQQRARR 109
Query: 119 FRASKETAE----KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
F+ +KE E K + RE+ + +L + + FD+N ITPGT FM LS
Sbjct: 110 FKGAKEAVELQQKKEELLNEFRERSEINDDVLAFVQNR---FDTNVITPGTAFMRDLSMA 166
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +Y+ +R+N P +K IKVI SDA++PGEGEHKI+D+IR QR Q ++DPNT+HCL GAD
Sbjct: 167 LQHYVIERMNKHPLFKDIKVIFSDASIPGEGEHKILDFIRVQRDQQNYDPNTKHCLYGAD 226
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKEC---VGLDAEPNP----- 286
ADLIMLGL+THEP F IIRE+ + + C +C Q GH +C + ++A P
Sbjct: 227 ADLIMLGLSTHEPYFYIIREQIITQEEKRCSICQQTGHFQMDCPNEMAVEAGQKPISQKI 286
Query: 287 ----ESVITFGSEVEFIFVRLSVLREYLEKELAMP--------NLPFPYSFERALDDWVF 334
E + G F F +L V+R+YL + L Y ER +DD+VF
Sbjct: 287 LQAQEQKVRKGITQSFQFAKLYVMRQYLNMRFSKVLFNDNLECKLKMQYDIERIIDDFVF 346
Query: 335 MCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQL 375
MCFFVGNDFLPH+P+L IR+G +D L+ LY T+ + + L
Sbjct: 347 MCFFVGNDFLPHIPNLSIRDGGIDALLTLYDHTITQVDDYL 387
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 414 GFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+K YY KF V P+D I + ++ YV LCW YYY+GC SW WY+PFHY+PFAS
Sbjct: 504 NYKLSYYNDKFGVKPEDFIQMQWLIKQSYVEALCWNFAYYYKGCISWSWYYPFHYSPFAS 563
Query: 473 DFINIAEVDTNFETG 487
D I+I + FE G
Sbjct: 564 DLIDIDQHIIEFERG 578
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I DFYP DF +DL GKKF W G +LPF++EERL +A Y LS EE +
Sbjct: 612 SEIADFYPIDFYVDLIGKKFEWLGEVILPFIEEERLLRAARKYEHLLSPEEKQ 664
>gi|298713577|emb|CBJ27105.1| dhm exonuclease [Ectocarpus siliculosus]
Length = 709
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 206/507 (40%), Positives = 291/507 (57%), Gaps = 74/507 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FRWL+ +YP VI ++ Q +N P D NLYLDMNG+IH
Sbjct: 131 MGIPKLFRWLTDQYP-VISQRLD---QGLNEHTAPID------------NLYLDMNGVIH 174
Query: 61 PCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH +D+ +E EM IF DR+F++VRPR+LLY+A+DG APRAKMNQQRSRRF
Sbjct: 175 MCTHHNDDEFIELNEKEMFRRIFIFTDRMFKLVRPRRLLYLAVDGTAPRAKMNQQRSRRF 234
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R+SKE +AE+ ++ DG + PE + FDSNCITPGT FM +L+ +I
Sbjct: 235 RSSKEAEVNMAEM------VMRDGKL--PEVTR---FDSNCITPGTDFMFKLTKAFQAWI 283
Query: 180 HDRLNNDPGW-KGIKVILSDANVPGEGEHKIMDYIRKQR-AQPDHDPNTQHCLCGADADL 237
+++ DP W + +V+ S +VPGEGEHK+MDYIR+ R +PD + +HCL G DADL
Sbjct: 284 EYKMDTDPFWQQNARVVFSGPDVPGEGEHKVMDYIREARETEPDWRDDLRHCLYGLDADL 343
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IML L THE +F+++RE+ +R P+ IT+ + +
Sbjct: 344 IMLSLVTHEKHFSLLREKMSVRHSR--------------------RKKPKDPITY-TRND 382
Query: 298 FIFVRLSVLREYL----EKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + +S+LRE L + + P LPF + ER +DD+VFMC VGNDFLP++P L+I
Sbjct: 383 FELMEVSLLREMLRLQFQSQANDPKLPFKFELERVIDDFVFMCILVGNDFLPNVPHLDIS 442
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEE---------ES 404
+GA++ ++N+YK + K L +++ G R + E S E E
Sbjct: 443 DGALNHMMNMYKLLLPKMGGYLTKKDQIHHG-----RLEMFMHEVSRREAMYFRRRGVEE 497
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR---SWK 460
+D V + DRYY++K D+ P+ + R +V H Y+ GL WVLKYY+ G SW
Sbjct: 498 SDLVLQDPGKYTDRYYKTKLDLDPEQEEEKRAVVKH-YLEGLYWVLKYYHVGVDAGGSWS 556
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P YAP AS N+ ++D +FE G
Sbjct: 557 WYYPHLYAPLASSMKNLMDIDISFEKG 583
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
SPI+++YP +F+ D NGK +W+ V +PF+DE+ + AL+
Sbjct: 617 SPILEYYPTEFECDANGKTASWETVVKIPFIDEKDVFGALS 657
>gi|183235666|ref|XP_657072.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169800426|gb|EAL51687.2| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449701673|gb|EMD42445.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 937
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 211/562 (37%), Positives = 298/562 (53%), Gaps = 101/562 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FFRWLS+K+P +I C ++ N D ++PN NG+E+DN Y+DMNG+IH
Sbjct: 31 MGVPSFFRWLSQKFPKIIDGCQGSFHEQYN------DLNEPNFNGVEYDNFYIDMNGLIH 84
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP+D+ +P+ ++MMV + +D L IVRPRKLLY+A+DGVAPRAKMNQQRSRRF+
Sbjct: 85 PCFHPQDRQSPETIEDMMVMLGRYLDYLIDIVRPRKLLYLAVDGVAPRAKMNQQRSRRFK 144
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++K+ + A + +G PE DSNCITPGT FM+ +S L YI
Sbjct: 145 SAKDAENAELKHAEENRNKVRNGL---PEVPYIKPLDSNCITPGTEFMSVVSKTLKKYIK 201
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ W + VILSD+ VPGEGEHKIMD+IR+Q+ PD++PN HC+ G DADLIML
Sbjct: 202 ERMSQSSYWNKLVVILSDSGVPGEGEHKIMDFIRRQKESPDYNPNIHHCMYGLDADLIML 261
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE-FI 299
LATHE F+IIRE+ Q + C +C + H +C P+ + V + + F
Sbjct: 262 SLATHERFFSIIREKVFFEQEQ-CYICNNI-HSPDKC------PHRKEVGAMDTITKPFQ 313
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERAL------------------------DDWVFM 335
F+ +LR YL+ L + + FER + D V +
Sbjct: 314 FLHCHILRGYLQITLKVEG----FEFERCVDDFIFFCFLVGNDFLPHIPSLDIRDGAVDL 369
Query: 336 CFFVGNDFLPH-------------------------LPSL------------------EI 352
V +FLPH P++ +I
Sbjct: 370 LMKVYREFLPHGGYITESGSLNVTNAKNFLQEVGKEEPAILEKKCQKEKNYAKRRLDNQI 429
Query: 353 REGAVDRLVNLYKKTVYKTQEQL-----RQEENGGGGGRGVKRSFDD---VDESSEEEES 404
RE + + N+Y+ + K+ E + Q+E +K+ D+ + E++E
Sbjct: 430 RELEIKK-ANVYENSTLKSTESINTLTPEQQEQLKTQEAEIKKIEDEERKLRADFEQKEL 488
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
DEV+L E G+ RYY KF + P+ D + H Y G+ WVL YYY+GC+SW WY+
Sbjct: 489 TDEVKLGEPGYTQRYYSVKFKIDPQKDTQKIRDIVHSYFEGMNWVLGYYYKGCQSWDWYY 548
Query: 464 PFHYAPFASDFINIAEVDTNFE 485
P+ YAPFA D VD NFE
Sbjct: 549 PYLYAPFAEDMGEY--VDYNFE 568
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
SPI DFYP+ F++D NG+K ++ + +L F+D+E+L + P
Sbjct: 608 SPISDFYPDTFELDFNGEKVDYKAIVVLTFIDQEKLLHYVEP 649
>gi|407853365|gb|EKG06397.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 1646
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 200/521 (38%), Positives = 284/521 (54%), Gaps = 77/521 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ + P+VI PF S P DNLYLDMNGIIH
Sbjct: 206 MGVPKFFRWVAERCPTVIT---------------PFRDSPP-----PVDNLYLDMNGIIH 245
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D A + E MM A+F +++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 246 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 305
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E + R++ +A G +P EK+ FDSNCITPGT FM R+S Y
Sbjct: 306 RYRSGYE-------LMVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQFQY 355
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I ++ DP W+ +V+ S + PGEGEHKI+D+IR+++ QP + PN HC+ G DADL
Sbjct: 356 FITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADL 415
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEP+F ++RE F P Q + E E G+ A+ ++
Sbjct: 416 VMLSLATHEPHFLLLREVVTFGPGQE---SRRAREQREEDEANGIIADK------SYRKA 466
Query: 296 VEFIFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
EF+ ++VLR+YL+ ++ +P Y +R LDD+V MCFF+GNDFLP +P+L I
Sbjct: 467 DEFVLFHVNVLRDYLDLDVRDKLGAKMPACYDLDRVLDDFVLMCFFIGNDFLPTIPTLGI 526
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDE---------SSEEEE 403
+G++ ++++LY K + E + G R V+ + E +EEE
Sbjct: 527 HDGSLLQMLDLYCKCILV--EGMYLTNQGQINWRAVELWLQGIGELELTTIKARQQQEEE 584
Query: 404 SNDEVRLWEDG----------------FKDRYYESK--FDVPKDDIAFRLM-VGHEYVLG 444
+V + +K+R+Y K FD D + + YV G
Sbjct: 585 YQRKVARRDPTHETAAITSAPIESIREYKERFYREKHGFDNGWDPQGKEMADLRLHYVEG 644
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
L WV+ YYYQG SWKW+FP HYAP ASD +N+ + E
Sbjct: 645 LTWVMGYYYQGPPSWKWFFPHHYAPMASDLVNLPAIAARVE 685
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+ F+PE KID G + W+G+ L+PF++E L A KL E+
Sbjct: 723 SPLKRFFPEILKIDREGARAPWEGIVLIPFIEERVLLAAYQSVQNKLGPED 773
>gi|409080083|gb|EKM80444.1| hypothetical protein AGABI1DRAFT_113625, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 315
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/319 (55%), Positives = 225/319 (70%), Gaps = 13/319 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV---NGQKI--PFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP +I E++ ++ NG ++ P + PNPNG+EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGDEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMMV +F+ DR+ ++RPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
SRRFR+S + EK E AR K+ E+E +DSN ITPGTPFM L+
Sbjct: 121 SRRFRSSHDAKEK--EDARQESLKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATS 178
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N DP WK I+V++SDA VPGEGEHKIMD+IR+QR+ P HDPNTQH + G D
Sbjct: 179 LRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLD 238
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESVITF 292
ADLIML LATHEPNF ++RE+ N +P C +CGQ GH +C G AE + T
Sbjct: 239 ADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEKK---TP 295
Query: 293 GSEVEFIFVRLSVLREYLE 311
+ FIF+ +++LREYLE
Sbjct: 296 PDKKPFIFLDVAILREYLE 314
>gi|358400793|gb|EHK50119.1| hypothetical protein TRIATDRAFT_280608 [Trichoderma atroviride IMI
206040]
Length = 454
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/292 (55%), Positives = 209/292 (71%), Gaps = 8/292 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E P +G IP D+++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPIVTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAP DE+EMM+ +F+ DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFKYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIRE--KLLADGCILPPEKEK--GSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + E K G + E FDSN ITPGTPFM L+ L
Sbjct: 121 RSAQEAKEKEEDKQALIELLKRQNGGTFAAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+ +LN DP W +K+I+SDA VPGEGEHKIM+++R QRA P++DPNT+H + G DA
Sbjct: 181 RYWCQYKLNTDPAWAKLKIIISDATVPGEGEHKIMNFVRSQRASPNYDPNTRHVIYGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
DLIMLGLATHEP+F ++RE+ F+ + R C +CGQ GHE C G +A+P+
Sbjct: 241 DLIMLGLATHEPHFRVLREDVFFQDGKNRACKLCGQKGHEANNCRG-NAKPS 291
>gi|345479163|ref|XP_003423891.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Nasonia
vitripennis]
Length = 1682
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 284/555 (51%), Gaps = 123/555 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ +K +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEKLKEY---QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E+ + IF I+ LFRI++P+KL +MA+DGVAPRAK+NQQR RR
Sbjct: 42 NCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+KE AEV + K A G +P E + FDSNCITPGT FM++L+ L Y+
Sbjct: 102 FRAAKE-----AEV--LEAKARAKGQEIPKE----ARFDSNCITPGTVFMSKLNEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+ K+ILS + VPGEGEHKIMDYIR +AQPD++ NT+HCL G DADLI
Sbjct: 151 ITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEP+F+++REE K G K+ + PE E F
Sbjct: 211 MLGLCSHEPHFSLLREEVK------------FGKTQKKIL------TPE-------ETNF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH---------- 346
+ LS++REYLE E + L F + E+ +DDWV M F VGNDF+PH
Sbjct: 246 CLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIENGA 305
Query: 347 -----------LPSLE--IREGAVDRLVNLYK-------------------------KTV 368
LP+L+ I E L K KT
Sbjct: 306 LPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFFEAKTG 365
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFD---------------DVDESSE-EEESNDEVRLWE 412
+ E R +N K++ D DE E E +S+ E++L
Sbjct: 366 RRLNESERNSKNSPDENASPKKTNKALNALIMATENELGADSDEDLEGESDSDTEMQLEF 425
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
K YY +K + D Y+ + W L YYY GC SW WY+P HYAPF S
Sbjct: 426 VQHKRDYYMNKMEYANVDAETMRSQAEGYIRAIQWNLHYYYNGCCSWSWYYPHHYAPFIS 485
Query: 473 DFINIAEVDTNFETG 487
D N ++ F+ G
Sbjct: 486 DIKNFKDLKLEFDLG 500
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 645 MAAQSTKAPSFIPG---GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+A + S +P G + SPII +YP DFK DLNGKK W+ V L+P +DE+ L
Sbjct: 510 LAVLPAASKSLLPTAYHGLMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSL 569
Query: 702 HKALAPYYEKLSVEE 716
KA+ P KL+ EE
Sbjct: 570 LKAMKPCNAKLTPEE 584
>gi|300120088|emb|CBK19642.2| unnamed protein product [Blastocystis hominis]
Length = 574
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/535 (36%), Positives = 293/535 (54%), Gaps = 53/535 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVE-DKPQEVNGQKIPFDSSKPNPNGME-FDNLYLDMNGI 58
MG+P + RWL RKYP ++ + D P + +G + FDN Y+DMNGI
Sbjct: 1 MGIPTYTRWLCRKYPLILKSLSDPDSPAQRDGNTSSQQQQQQQQQQPPVFDNFYIDMNGI 60
Query: 59 IHPCTHPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IH C H + P++ D+++ + +DRL V PRKLL+M++DGVAP+AK+ +QR R
Sbjct: 61 IHDCAHGQILGSTPRNTDDVLENLQNYLDRLITAVNPRKLLFMSVDGVAPKAKVKEQRGR 120
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPE--KEKGSHFDSNCITPGTPFMARLSACL 175
RFR+ E+ E +++++++A+G PP+ +E+ F+S I PGT FM+ L L
Sbjct: 121 RFRSGYESVEIKQLEEQLKKEMIAEGFQFPPDVEEEEEESFNSLNIFPGTDFMSELQVFL 180
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YY+ L ++ + + V++SD++VPGEGEHKIM++IR QR QPD+ PN H + G DA
Sbjct: 181 DYYVTKTLQSNEKLQNLNVLISDSDVPGEGEHKIMEFIRSQRTQPDYLPNQTHIIHGLDA 240
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DL ML L++HEP F I+ E+ + C +CG H +ECV L P + ++
Sbjct: 241 DLSMLALSSHEPLFYILVEQLFITR---CAICGAPDHSTRECVKL-----PRKKLGASTK 292
Query: 296 VEFIFVR------LSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ + R + LR+YL+ E+ + PY+ ER +DD+VF+C FVGNDFLP L
Sbjct: 293 DDKFYHRPLQVISIKTLRDYLDLEMRPVASQMKIPYNLERIIDDYVFLCIFVGNDFLPSL 352
Query: 348 PSLEIREGAVDRLVNLYKKTV----------------YKTQEQLRQEENGGGGGRGVKRS 391
P +IREGAV L+NLY++ + + Q +R+ G KR
Sbjct: 353 PLFDIREGAVTMLLNLYRRLLPTWTDYIIRPGGEINYLQVQSLMREVYANEGNILRRKRL 412
Query: 392 FDDVD-----------ESSEEEESNDE--VRLWEDGFKDRYYESKFDV-PKDDIAFRLMV 437
F S++ E DE V + G+ D YY KF + P D ++ V
Sbjct: 413 FGRYTVGRLKRPAVQASSTKPPELGDEESVDYGKPGWSDAYYRQKFGLDPSDRVSIE-RV 471
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVN 492
EY+LGL W+++YY GC SW W++P HYAP D + V +F G QP++
Sbjct: 472 CQEYMLGLAWIMRYYCTGCASWDWFYPEHYAPLLRDLSAMNNVTVSFSLG-QPIS 525
>gi|156537119|ref|XP_001603129.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Nasonia
vitripennis]
Length = 1739
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 216/555 (38%), Positives = 284/555 (51%), Gaps = 123/555 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ +K +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEKLKEY---QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E+ + IF I+ LFRI++P+KL +MA+DGVAPRAK+NQQR RR
Sbjct: 42 NCSHPNDADATFRITEETIFKNIFHYIEILFRIIQPQKLFFMAVDGVAPRAKINQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+KE AEV + K A G +P E + FDSNCITPGT FM++L+ L Y+
Sbjct: 102 FRAAKE-----AEV--LEAKARAKGQEIPKE----ARFDSNCITPGTVFMSKLNEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+ K+ILS + VPGEGEHKIMDYIR +AQPD++ NT+HCL G DADLI
Sbjct: 151 ITYKISTDKLWQKCKIILSGSEVPGEGEHKIMDYIRYMKAQPDYEGNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEP+F+++REE K G K+ + PE E F
Sbjct: 211 MLGLCSHEPHFSLLREEVK------------FGKTQKKIL------TPE-------ETNF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH---------- 346
+ LS++REYLE E + L F + E+ +DDWV M F VGNDF+PH
Sbjct: 246 CLLHLSLMREYLEHEFSPVKDKLTFKFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIENGA 305
Query: 347 -----------LPSLE--IREGAVDRLVNLYK-------------------------KTV 368
LP+L+ I E L K KT
Sbjct: 306 LPLLYNAYMDVLPTLDGYINEAGTLNLERFEKFMEKLGKYDLEQFDEIYADLKFFEAKTG 365
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFD---------------DVDESSE-EEESNDEVRLWE 412
+ E R +N K++ D DE E E +S+ E++L
Sbjct: 366 RRLNESERNSKNSPDENASPKKTNKALNALIMATENELGADSDEDLEGESDSDTEMQLEF 425
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
K YY +K + D Y+ + W L YYY GC SW WY+P HYAPF S
Sbjct: 426 VQHKRDYYMNKMEYANVDAETMRSQAEGYIRAIQWNLHYYYNGCCSWSWYYPHHYAPFIS 485
Query: 473 DFINIAEVDTNFETG 487
D N ++ F+ G
Sbjct: 486 DIKNFKDLKLEFDLG 500
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 645 MAAQSTKAPSFIPG---GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+A + S +P G + SPII +YP DFK DLNGKK W+ V L+P +DE+ L
Sbjct: 510 LAVLPAASKSLLPTAYHGLMTEEKSPIIKYYPLDFKTDLNGKKQEWEAVVLIPLIDEKSL 569
Query: 702 HKALAPYYEKLSVEE 716
KA+ P KL+ EE
Sbjct: 570 LKAMKPCNAKLTPEE 584
>gi|71005096|ref|XP_757214.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
gi|46096576|gb|EAK81809.1| hypothetical protein UM01067.1 [Ustilago maydis 521]
Length = 1478
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/372 (47%), Positives = 233/372 (62%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP +I +ED KIP EFDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYP-MISQLIED-------NKIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E ++ +A+F I+ LF ++PRK+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDNDASFRITETQIFLAVFAYIEHLFNKIKPRKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +KE E I+EK + G +LP E+ FDSNCITPGTPFMA+LS L Y+
Sbjct: 102 FRTAKEAKE-------IKEKAESRGEVLPEEEA----FDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D W+ ++VILS +VPGEGEHKIM+YIR +AQPD++PN +HCL G DADLI
Sbjct: 151 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q G K L+ + F
Sbjct: 211 MLGLLSHDPHFCLLREEV------------QFGPRRKSKGSLEMQ-------------NF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYL+ E +LPFPY FER +DD++ + FVGNDFLPHLP L I +GA
Sbjct: 246 FLLHLSLFREYLDLEFQDLRSSLPFPYDFERIIDDFILLNIFVGNDFLPHLPGLHINQGA 305
Query: 357 VDRLVNLYKKTV 368
+D L N+YK+ +
Sbjct: 306 MDLLFNIYKRIL 317
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
DE+ EE+ + +K YY+ K ++ ++ + Y+ GL WVL YYY G
Sbjct: 518 DEADPEEDYKKRLEAQMTAWKQSYYKEKLEIDYNNDEAMSKLAFRYIEGLQWVLHYYYDG 577
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++ +HYAP SD N+ ++ F G
Sbjct: 578 VASWGWFYDYHYAPKISDLKNVGQMKFEFTLG 609
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F+ DLNGKK W+ V +PF+DE+RL +AL L +EE
Sbjct: 642 NSPIIDFYPTNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEE 693
>gi|426198151|gb|EKV48077.1| hypothetical protein AGABI2DRAFT_191725, partial [Agaricus bisporus
var. bisporus H97]
Length = 315
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/319 (55%), Positives = 225/319 (70%), Gaps = 13/319 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV---NGQKI--PFDSSKPNPNGMEFDNLYLDM 55
MGVPA FRWLS+KYP +I E++ ++ NG ++ P + PNPNG+EFDNLYLDM
Sbjct: 1 MGVPALFRWLSKKYPKIIYPVEEEEESKIPDDNGVEVTVPVNMLLPNPNGVEFDNLYLDM 60
Query: 56 NGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
NGI+HPCTHPE KPAP+ E+EMMV +F+ DR+ ++RPRKLL+MAIDGVAPRAKMNQQR
Sbjct: 61 NGIVHPCTHPEGKPAPETEEEMMVEVFKYTDRVVNMIRPRKLLFMAIDGVAPRAKMNQQR 120
Query: 116 SRRFRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
SRRFR+S + EK E AR K+ E+E +DSN ITPGTPFM L+
Sbjct: 121 SRRFRSSHDAKEK--EDARQESIKIWKAMGKEITEEEHKEAWDSNAITPGTPFMDLLATS 178
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++N DP WK I+V++SDA VPGEGEHKIMD+IR+QR+ P HDPNTQH + G D
Sbjct: 179 LRYWVVQKMNTDPAWKNIQVLISDAGVPGEGEHKIMDFIRRQRSNPGHDPNTQHVIYGLD 238
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP--CDVCGQMGHEMKECVGLDAEPNPESVITF 292
ADLIML LATHEPNF ++RE+ N +P C +CGQ GH +C G AE + T
Sbjct: 239 ADLIMLALATHEPNFRVLREDVFANDTKPTACRMCGQEGHYAAQCTGTKAEIEKK---TP 295
Query: 293 GSEVEFIFVRLSVLREYLE 311
+ FIF+ +++LREYLE
Sbjct: 296 PDKKPFIFLDVAILREYLE 314
>gi|406701694|gb|EKD04809.1| strand exchange protein (5'-3' exoribonuclease) [Trichosporon
asahii var. asahii CBS 8904]
Length = 1632
Score = 335 bits (860), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/319 (54%), Positives = 221/319 (69%), Gaps = 8/319 (2%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGI+HPCTHPE + AP E +MMV +F+ +R+ + RPRK+L+MAIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPEGRDAPPTEQDMMVEVFKYTERVVNMARPRKVLFMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRAS+E AEK E + A G + E + +DSN ITPGTPFM LSA
Sbjct: 61 RSRRFRASQEAAEKEEERKQQIAMFEAMGQTVSDETKNKKSWDSNAITPGTPFMDLLSAS 120
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ +L+ DPGWK VI+SDA+VPGEGEHKI+D+IR++R P+ DPNT H + G D
Sbjct: 121 LKYWVSHKLSTDPGWK--DVIISDASVPGEGEHKIVDWIRRERTYPEWDPNTSHAIYGLD 178
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP---CDVCGQMGHEMKECVGLDAEPNPESVIT 291
ADLIML LATHEPNF ++RE+ +R CD CG+ GH C G P+P V
Sbjct: 179 ADLIMLALATHEPNFRVLREDVFAQSSRGPRVCDNCGKEGHIKANCKGEKKMPDPNVVAK 238
Query: 292 FGSE--VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
E FI++ ++ LR+YL EL +P FP+ E A+DDW+FM FFVGNDFLPHLPS
Sbjct: 239 AKPEDPKPFIWLDVACLRDYLAVELNVPTS-FPFDQELAIDDWIFMIFFVGNDFLPHLPS 297
Query: 350 LEIREGAVDRLVNLYKKTV 368
LEIREGA+D L+ ++K+ +
Sbjct: 298 LEIREGAIDTLLEIWKREL 316
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E D VRLWE G+++RYY KF V D F + Y+ GLCWVL+YYYQG +W WY
Sbjct: 573 EYEDTVRLWEPGYRERYYRQKFGVELSDKKFMSEITRSYMEGLCWVLEYYYQGVPAWDWY 632
Query: 463 FPFHYAPFASDFINIAEVDTNFETG 487
+P+HYAPFA DF ++ +D F G
Sbjct: 633 YPYHYAPFAQDFHDVGSLDIKFRKG 657
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP DF+ID+NGKK AWQGVALLPF+D+ RL AL +LS +E
Sbjct: 689 EDSPIIDFYPSDFEIDMNGKKMAWQGVALLPFIDQHRLLAALKSKEPELSQDE 741
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRE 640
G+LT+ G V L R Q+I+ + ED IF++R++ E + RN ++R+E
Sbjct: 321 GYLTNHGKVNLGRAQIILDGIAAREDNIFQQRKEQEDR-QERNAKRRRKE 369
>gi|145505349|ref|XP_001438641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405813|emb|CAK71244.1| unnamed protein product [Paramecium tetraurelia]
Length = 773
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/384 (46%), Positives = 242/384 (63%), Gaps = 24/384 (6%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL + P ++ +E+ + S NP + DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENSDES---------SLSNNP---DIDNLYLDMNGIIH 48
Query: 61 PCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC+HP+ P P D+M V +F IDRL IVRP++L+YMAIDGVAPRAK+NQQRSRR
Sbjct: 49 PCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIVRPKELIYMAIDGVAPRAKLNQQRSRR 108
Query: 119 FRASKETAEKIAEVARIREKLLADGC---ILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
FRA++E+ E R+R+ G L EK +FDSN ITPGT FM +L+ L
Sbjct: 109 FRAAQESIRIQKEKERLRDYWRTQGLNSDALNTYIEK--NFDSNQITPGTEFMQKLNIAL 166
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YYI+DR+NN+P ++ + +I +D+++PGEGEHKI+ ++R QR Q ++ +HCL GADA
Sbjct: 167 QYYIYDRMNNNPLFRNVLIIFNDSSIPGEGEHKILQFVRDQRRQMNYK-TVRHCLYGADA 225
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS- 294
DLIMLGL+THEP F +IRE N + C +C Q GH +C + + N
Sbjct: 226 DLIMLGLSTHEPYFYVIRETIMANDDKQCSICQQKGHFFTDCKKREKQYNQIQQQQKNKL 285
Query: 295 -EVEFIFVRLSVLRE--YLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+V+F ++L+++RE Y E +L Y ER +DD+VFMCF VGNDFLPH+P L+
Sbjct: 286 IQVDFQILQLNIVREFLYFETRDLQASLKGQYDLERIIDDFVFMCFLVGNDFLPHIPCLK 345
Query: 352 IREGAVDRLVNLYKKTVYKTQEQL 375
I EG +D L+ +YK + + + L
Sbjct: 346 ITEGGIDCLLIIYKTILSQIGDYL 369
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 397 ESSEEEESNDEVRLWED-GFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+ ++ +S+ E++ W+ +K RYY+ KF + P F+ + Y+ L W LKYYYQ
Sbjct: 456 DQAQSAKSSQELKKWKAVSYKQRYYQEKFGIKPAQFNEFQHRIKISYLEALAWTLKYYYQ 515
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
GC W W++P+HYAPFA D N+ + F T
Sbjct: 516 GCVDWGWFYPYHYAPFAQDLTNLDQCLFEFSLNT 549
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 30/39 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
SPI DFYP DF +DL GKKFAW G +LPFVD +RL KA
Sbjct: 582 SPIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLIKA 620
>gi|154413474|ref|XP_001579767.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121913977|gb|EAY18781.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 710
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 202/526 (38%), Positives = 283/526 (53%), Gaps = 94/526 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGM---EFDNLYLDMNG 57
MGVP+FFRWL RKYP V+ +E + D + NPN + EFDNLY+DMNG
Sbjct: 1 MGVPSFFRWLQRKYPLVVSRVLE--------SDVDVDPLESNPNTIGSQEFDNLYIDMNG 52
Query: 58 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IH C HP D+ PK+ +E+ I + R+F IVRPRKLLY+AIDGVAPRAKMNQQRSR
Sbjct: 53 LIHSCFHPADREQPKNIEEVYENIKLYLKRIFNIVRPRKLLYLAIDGVAPRAKMNQQRSR 112
Query: 118 RFRASKETAEKIAEVARIR--EKLLADGCILPPEKEKGSHF----DSNCITPGTPFMARL 171
RFRA+K++ E R + ++L+ G EK + DSN ITPGT FM L
Sbjct: 113 RFRAAKDS-----EYNRNKNFQELITLGKQKEAEKIMKEQYIQDHDSNIITPGTKFMCDL 167
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
S L +I + N P W I +ILSDA+VPGEGEHKIM++IR QR ++PNT+H +
Sbjct: 168 SQILRSFISEMQNTSPAWSNIAIILSDASVPGEGEHKIMEFIRIQRLTDGYNPNTRHVMY 227
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLI L LA+HE F+I+RE D + N + +
Sbjct: 228 GLDADLIFLALASHEVYFSILRENI-----------------------FDKKENDKPI-- 262
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
FIF + VLR+YL++EL + ++ F + ER +DD VF+CF GNDFLP +P E
Sbjct: 263 --GPSSFIFANIFVLRQYLDRELQI-DVKFGWDLERVIDDIVFLCFAAGNDFLPQIPGFE 319
Query: 352 IREGAVDRLVNLYKK-------------------------------------TVYKTQEQ 374
I G VD+L YKK V ++
Sbjct: 320 IPRGFVDQLFERYKKLLPQLSSYITNTGDVEMKNLLPFMLGFDYLEPESVHNIVSPSERS 379
Query: 375 LRQEENGGGGGRGVKRSFDDVDE----SSEEEESNDEVRLWEDGFKDRYY-ESKFDVPKD 429
+ E VK + ++ +++ +++ + + +++ ++Y +SKF +D
Sbjct: 380 ISVSEYVNNLCNDVKTEYKPENDKKLVTAKFQKNQNNLEIYDTKRDKKFYYQSKFGF-ED 438
Query: 430 DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
+ + +V HEY G+ WVLKYY +G SW W++P+H AP SDF+
Sbjct: 439 EENIKNVV-HEYCKGMEWVLKYYTKGVASWSWFYPYHSAPLVSDFV 483
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPI+DFYP+ FK+DL G AW+G L+PF+D +L K L + L+ EE +
Sbjct: 529 DSPILDFYPKKFKVDLEGGTTAWKGHVLIPFIDAHKLKKCLRNVNDSLNEEEKQ 582
>gi|237842105|ref|XP_002370350.1| exoribonuclease, putative [Toxoplasma gondii ME49]
gi|211968014|gb|EEB03210.1| exoribonuclease, putative [Toxoplasma gondii ME49]
Length = 1239
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 245/422 (58%), Gaps = 63/422 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ----------KIPFDSSKPNPNGME--- 47
MGVP F+RWL +YP V++ E+ QE+ + + + + +G E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 48 ---------FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 98
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 158
Y+AIDGVAPRAKMNQQRSRRF+A+K+ E+ A +R + ++G +PP+K + +DS
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMR---WDS 177
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N ITPGTPFM RL+ L YYI DRL + WKG++VI SDA VPGEGEHKIMD+IR+QR
Sbjct: 178 NVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRK 237
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMK 275
+ PN +H L GADADLIMLGLATHE NF+I+RE + P Q C CG +GH +
Sbjct: 238 SGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQV--CSACGAVGHSAE 295
Query: 276 ECVGLDAEPNPES----------------VITFGSEVE----------------FIFVRL 303
C + P+ + G E+ ++L
Sbjct: 296 NCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQL 355
Query: 304 SVLREYLEKE-LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVN 362
VLREYL E + + ER +DD+VF+CF GNDFLPHLP I+ G++D LV
Sbjct: 356 PVLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQ 415
Query: 363 LY 364
LY
Sbjct: 416 LY 417
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 415 FKDRYYESKFDVP-----KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
++ +YY KF +P KD V Y++GL WVL YYYQGC S+ W+FPFHYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 470 FASDFIN 476
A D +
Sbjct: 737 LAVDLAD 743
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I DFYP D K+D NGK+ WQ V LLPF+DE RL + P + L++EE E
Sbjct: 829 SAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEERE 881
>gi|221502801|gb|EEE28515.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 1239
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 245/422 (58%), Gaps = 63/422 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ----------KIPFDSSKPNPNGME--- 47
MGVP F+RWL +YP V++ E+ QE+ + + + + +G E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 48 ---------FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 98
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 158
Y+AIDGVAPRAKMNQQRSRRF+A+K+ E+ A +R + ++G +PP+K + +DS
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMR---WDS 177
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N ITPGTPFM RL+ L YYI DRL + WKG++VI SDA VPGEGEHKIMD+IR+QR
Sbjct: 178 NVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRK 237
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMK 275
+ PN +H L GADADLIMLGLATHE NF+I+RE + P Q C CG +GH +
Sbjct: 238 SGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQV--CSACGAVGHSAE 295
Query: 276 ECVGLDAEPNPES----------------VITFGSEVE----------------FIFVRL 303
C + P+ + G E+ ++L
Sbjct: 296 NCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWDTGLESHRRAWKPLQMLQL 355
Query: 304 SVLREYLEKE-LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVN 362
VLREYL E + + ER +DD+VF+CF GNDFLPHLP I+ G++D LV
Sbjct: 356 PVLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQ 415
Query: 363 LY 364
LY
Sbjct: 416 LY 417
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 415 FKDRYYESKFDVP-----KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
++ +YY KF +P KD V Y++GL WVL YYYQGC S+ W+FPFHYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 470 FASDFIN 476
A D +
Sbjct: 737 LAVDLAD 743
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I DFYP D K+D NGK+ WQ V LLPF+DE RL + P + L++EE E
Sbjct: 829 SAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEERE 881
>gi|221482303|gb|EEE20658.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii GT1]
Length = 1239
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 245/422 (58%), Gaps = 63/422 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ----------KIPFDSSKPNPNGME--- 47
MGVP F+RWL +YP V++ E+ QE+ + + + + +G E
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGENHVQEMREELRQKKEQQRQQAAKEKEATSTDGQENND 60
Query: 48 ---------FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLL 98
+D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I+RPR+LL
Sbjct: 61 AETTEEDFAYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDIIRPRQLL 120
Query: 99 YMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 158
Y+AIDGVAPRAKMNQQRSRRF+A+K+ E+ A +R + ++G +PP+K + +DS
Sbjct: 121 YLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYAELRAQFESEGREVPPKKMR---WDS 177
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N ITPGTPFM RL+ L YYI DRL + WKG++VI SDA VPGEGEHKIMD+IR+QR
Sbjct: 178 NVITPGTPFMHRLADALTYYIQDRLATNENWKGLRVIFSDATVPGEGEHKIMDFIRQQRK 237
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMK 275
+ PN +H L GADADLIMLGLATHE NF+I+RE + P Q C CG +GH +
Sbjct: 238 SGEFCPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQV--CSACGAVGHSAE 295
Query: 276 ECVGLDAEPNPES----------------VITFGSEVE----------------FIFVRL 303
C + P+ + G E+ ++L
Sbjct: 296 NCPASSSVQAPDDRAFRVFEQDKRGLKRHLEARGVELREDWATGLESHRRAWKPLQMLQL 355
Query: 304 SVLREYLEKE-LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVN 362
VLREYL E + + ER +DD+VF+CF GNDFLPHLP I+ G++D LV
Sbjct: 356 PVLREYLAYEFITSQEEGQSFDLERCIDDFVFLCFLCGNDFLPHLPHQSIQRGSIDALVQ 415
Query: 363 LY 364
LY
Sbjct: 416 LY 417
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 415 FKDRYYESKFDVP-----KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
++ +YY KF +P KD V Y++GL WVL YYYQGC S+ W+FPFHYAP
Sbjct: 677 WRQKYYRQKFHLPAESDRKDVEQLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 736
Query: 470 FASDFIN 476
A D +
Sbjct: 737 LAVDLAD 743
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I DFYP D K+D NGK+ WQ V LLPF+DE RL + P + L++EE E
Sbjct: 829 SAIADFYPSDVKMDPNGKRHQWQWVVLLPFIDENRLLRTCKPLEKFLTLEERE 881
>gi|350289466|gb|EGZ70691.1| hypothetical protein NEUTE2DRAFT_92294 [Neurospora tetrasperma FGSC
2509]
Length = 531
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 162/269 (60%), Positives = 200/269 (74%), Gaps = 7/269 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +ED+P + +G IP D++KPNPNG EFDNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSTKYPKIISPVIEDQPITMPDGTVIPVDATKPNPNGEEFDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAPKDE+EMMV +F+ DR+ +VRPRKLL +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPKDEEEMMVEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEK-----GSHFDSNCITPGTPFMARLSAC 174
RA++E EK + + E LL P E+E FDSN ITPGTPFM L+A
Sbjct: 121 RAAREAMEKEEDKQKFVE-LLKKQNGKPQEEEPVEIVVKKAFDSNSITPGTPFMDILAAS 179
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+ +LN DP W IKVI+SDA VPGEGEHKIM+++R QR P+HDPNT+H + G D
Sbjct: 180 LRYWCSYKLNTDPAWANIKVIISDATVPGEGEHKIMEFVRSQRGSPNHDPNTRHVIYGLD 239
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARP 263
ADLIMLGLATHEP+F ++RE+ +RP
Sbjct: 240 ADLIMLGLATHEPHFRVLREDVFAQDSRP 268
>gi|291220730|ref|XP_002730377.1| PREDICTED: rCG25308-like [Saccoglossus kowalevskii]
Length = 2104
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 294/575 (51%), Gaps = 142/575 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + V +IP EFDNLYLDMNG+IH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEV---VRENQIP-----------EFDNLYLDMNGVIH 41
Query: 61 PCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP +D P + E+++ IF I+ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 VCSHPNDDDPHFRISEEKIFKDIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++ E+ +K L+ G LP EK FDSNCITPGT FM +L+ L Y+
Sbjct: 102 FRSARAAEEQ-------EKKALSKGETLPTEKR----FDSNCITPGTEFMVKLNEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ ++ D W+G+++ LS PGEGEHK+M++IR ++A P +DPNT+HCL G DADL+
Sbjct: 151 VNKKITEDEMWRGLRIYLSGHETPGEGEHKVMEFIRAEKADPKYDPNTRHCLYGLDADLM 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEP+F+++REE + G+ + + P PE E F
Sbjct: 211 MLGLTSHEPHFSLLREEVR---------FGKKSQQKR-------TPTPE-------ETTF 247
Query: 299 IFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYLE E + F Y ER +DDWV M F VGNDF+PHLP L I A
Sbjct: 248 HLLHLSLFREYLEFEFQDVKGKISFDYDLERIIDDWVLMGFLVGNDFIPHLPDLHINHDA 307
Query: 357 V--------------------DRLVNLYKKTVY-------------KTQEQLRQEENGGG 383
+ D ++NL + VY +T L+ E G
Sbjct: 308 LPLLYKTYIEVLPLVDGYLNEDGILNLKRFEVYLKKLSEFDRNKFSETSVDLKYFEGKKG 367
Query: 384 --------GGRGVKRS-----------------FDDVDESSEEEESND------------ 406
G R KR F + + E E+S+D
Sbjct: 368 STEGSAWKGQRIKKREEKKEALRAAKNLAQASMFQVLSTTEESEDSSDNGNKNSVETLFD 427
Query: 407 -EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVL-------GLC------WVLKYY 452
E +L D + +E +F K + ++ +G+E V LC W+L YY
Sbjct: 428 EETKLDADVDEAEIFEMEFRQHKRNY-YQTKLGYENVTEEVLKDQALCYVTGIQWILHYY 486
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
Y G +SW WY+P HYAPF SD ++ + ++ G
Sbjct: 487 YNGVQSWGWYYPHHYAPFMSDVCGFSDCELKYDIG 521
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPII++YP DF DLNGK+ W+ V L+PF+DE+ L A+AP L+ EE
Sbjct: 554 NSPIIEYYPVDFDTDLNGKQQDWEAVVLIPFIDEKCLLDAMAPLNNILTDEE 605
>gi|302697115|ref|XP_003038236.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
gi|300111933|gb|EFJ03334.1| hypothetical protein SCHCODRAFT_255205 [Schizophyllum commune H4-8]
Length = 1480
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/255 (61%), Positives = 195/255 (76%), Gaps = 1/255 (0%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
GVPA FRWLS+KYP ++ +E++P+++ + IP D+S NPNG+EFDNLYLDMNGI+HP
Sbjct: 10 GVPALFRWLSKKYPKIVQPVIEEEPRQIGDEVIPIDASGRNPNGVEFDNLYLDMNGIVHP 69
Query: 62 CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
CTHPE KPAP+ E+EMMV IF +R+ +VRPRKLL+MAIDGVAPRAKMNQQRSRRFRA
Sbjct: 70 CTHPEGKPAPETEEEMMVEIFNYTERVVNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRA 129
Query: 122 SKETAEKIAEVARIREKLLADGCILPPE-KEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
S+E EK A E + G L E K + +DSN ITPGTPFM L+ L Y+
Sbjct: 130 SQEAQEKEDARAESLELWKSMGKELTDEMKNPKAAWDSNAITPGTPFMTLLANSLRYWTV 189
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++N DP WKGI+VI+SDA+VPGEGEHKIMD+IR+QR P HDPNT+H + G DADLIML
Sbjct: 190 QKMNEDPAWKGIQVIISDASVPGEGEHKIMDFIRRQRVNPGHDPNTEHVIYGLDADLIML 249
Query: 241 GLATHEPNFTIIREE 255
LATHEP+F ++RE+
Sbjct: 250 SLATHEPHFRVLRED 264
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
E D V+LWE G+K+RYY++KF D FR V +Y+ GL WVL+YYYQG
Sbjct: 552 EQADHVQLWEPGYKERYYKNKFGKEYSDEEFRKDVTTKYMEGLAWVLQYYYQG 604
>gi|298707210|emb|CBJ29957.1| 5'-3' exoribonuclease 1 [Ectocarpus siliculosus]
Length = 488
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 215/536 (40%), Positives = 277/536 (51%), Gaps = 110/536 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP + +I DS+ EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFYRWISERYPKI--------------NQIVSDSTLLP----EFDNLYLDMNGILH 42
Query: 61 PCTHPEDK--PAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTHP D A E ++++ IF IDR+ IVRPR++LYMAIDGVAPRAKMNQQRSR
Sbjct: 43 TCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSR 102
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFRA K+ E +A + +++ D + FDSNCITPGT FMA++S L Y
Sbjct: 103 RFRARKDMQEA-KLIAESKGEVVDDTAV----------FDSNCITPGTEFMAKISRHLRY 151
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
++ ++ DP WK + V S VPGEGEHKIM YIR +R+ PNT+HC+ G DADL
Sbjct: 152 FVQKKITEDPLWKALTVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTRHCMYGQDADL 211
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I+LGL THEP+FT++RE F N AR G +A + V+ +
Sbjct: 212 ILLGLVTHEPHFTLLREVVNFGQNAAR----------------GKNAS---KVVVKTTRD 252
Query: 296 VEFIFVRLSVLREYLEKELA--MP-NLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+F + LSVLREY+ E MP ER +DD+VF+ F VGNDFLPH+PSL+I
Sbjct: 253 AQFQLLHLSVLREYVWAEFTRDMPEETAAEMDRERVVDDFVFLTFLVGNDFLPHMPSLDI 312
Query: 353 REGAVDRLVNLYKKTV-------YKTQEQL----------------RQEE---------- 379
E A L +Y+ Y T+E R++E
Sbjct: 313 GEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDCADRLEAFLSEVGSREDEIFSERAEEEA 372
Query: 380 NGGGGGRGVKRSFDDVDE-SSEEEESNDEVRLW-----------------EDGFKD---R 418
G R + F +E SE E + +E + EDG KD R
Sbjct: 373 EFRGRRRKTSKRFGRAEEVPSEAEIALEEAKRQRSYEKAMLDTMGYVPETEDGGKDYKGR 432
Query: 419 YYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
YY KF + + YV GL W L YYY+GC SW W+FPFHY P SD
Sbjct: 433 YYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWFFPFHYVPMISDL 488
>gi|123469987|ref|XP_001318202.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900955|gb|EAY05979.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 797
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 190/383 (49%), Positives = 239/383 (62%), Gaps = 22/383 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGM---EFDNLYLDMNG 57
MGVPAFFR LSRKYP +I +C+E P E NG +P ++S PNPN + EFD LYLDMNG
Sbjct: 1 MGVPAFFRTLSRKYPLIISNCIE--PHETNGHYLP-NASLPNPNTIGDREFDCLYLDMNG 57
Query: 58 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IHPC HPE P PK E E++ I I+RLF IVRPR++L+MAIDG APRAKMNQQR R
Sbjct: 58 LIHPCFHPEGLPPPKSEAEVLQNIENYIERLFMIVRPRQILFMAIDGPAPRAKMNQQRKR 117
Query: 118 RFRASKETAE----KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
RF A+K+ A K + + E LA P + + DSN ITPGT F RLS
Sbjct: 118 RFFAAKQAAHDRWIKYWKAQKSGETELAAELYNP---DYLKNHDSNVITPGTLFFERLSK 174
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
LH +I + DP W I VILSDA+VPGEGEHKIMD++R QR +P +D N H + G
Sbjct: 175 HLHGFIQRKQETDPAWGKICVILSDASVPGEGEHKIMDFVRAQRLEPQYDSNRHHVIYGL 234
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQ-MGHEMKECVGL-----DAEPNPE 287
DAD+I LGLA+HEP +TI+RE + P Q E E + L DA E
Sbjct: 235 DADIIFLGLASHEPYWTILRERINEAKDLPRQNSQQKKATEEDEKMALHHQIFDAPEEKE 294
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPNLP--FPYSFERALDDWVFMCFFVGNDFLP 345
V G + F FV L +LR+YLE++L NLP P+ ERA+DD++F+C+ GNDF+P
Sbjct: 295 KVDLIGPK-HFDFVSLWILRQYLERDLKPRNLPPNLPWDLERAIDDFIFICYGCGNDFIP 353
Query: 346 HLPSLEIREGAVDRLVNLYKKTV 368
LP I EG V ++ LYK +
Sbjct: 354 TLPGFSIAEGTVSDIICLYKNNL 376
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 415 FKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
K YY+ KF K++IA + E+ G+ W L YY G +W W +P+H AP +SD
Sbjct: 484 LKRVYYKQKFHAETKEEIA---KIVTEFTRGMIWTLNYYLHGTHNWDWSYPYHSAPCSSD 540
Query: 474 F--INIAEVDTNFETG 487
+ +++ F+ G
Sbjct: 541 WDLVDVNPATYQFDRG 556
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
+ SPI DFYP F IDL G K A++G L+PF+ E
Sbjct: 588 EKSPIKDFYPTTFSIDLEGAKQAYKGHVLVPFIGE 622
>gi|66819171|ref|XP_643245.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
gi|60471408|gb|EAL69368.1| 5'-3' exoribonuclease [Dictyostelium discoideum AX4]
Length = 1749
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 205/556 (36%), Positives = 287/556 (51%), Gaps = 134/556 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP ++ QKI DS+ P E+DNLYLDMNGIIH
Sbjct: 1 MGVPRFFRWVSERYPQIL-------------QKI-LDSNPP-----EYDNLYLDMNGIIH 41
Query: 61 PCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+ + E+E++ + +DRLF +RP KL YMAIDGVAPR+K+NQQR RRF
Sbjct: 42 ACSQEFANSLIEFSEEELIRQVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ + ++++KL+++G +P F+ ITPGT FM LS + +YI
Sbjct: 102 LS-------VHRDEKLKQKLISEGKPVPE-----VIFNRTAITPGTQFMYNLSESIQFYI 149
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+++ D W+ ++VI S PGEGEHKI+DYIRK +A PD D N HCL G DADLI+
Sbjct: 150 KKKISEDLSWREVRVIFSGPENPGEGEHKIIDYIRKNKASPDWDANQSHCLYGLDADLIL 209
Query: 240 LGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
LGL THEPNF+I+REE FKP + +++
Sbjct: 210 LGLITHEPNFSILREEISFKPTK---------------------------------RQLD 236
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F + +S+LREYL+ EL +L F Y ER +DD++ + F GNDFLPHLP LEI +G +
Sbjct: 237 FQLLHISLLREYLDLELRNDDLEFGYDLERIIDDFILIMIFFGNDFLPHLPFLEISKGGL 296
Query: 358 DRLVNLYKKTV---------------------YKTQEQLRQEENGGGGGRGVKRSFDD-- 394
+ + LYK ++ +K ++ +++ G G + DD
Sbjct: 297 NSIFELYKSSLPSLGGYLTEGATIDLERLQHFFKFLQKFEKKQQQGIMG-STEEDLDDKK 355
Query: 395 ------VDESSEEEESNDE-------------------VRLWEDGFKD------------ 417
V++S E + DE V EDG +D
Sbjct: 356 VEVAELVEDSVLEHDGLDEEAKKEFERLAMERLKSHFPVSDSEDGEEDPDEQLVNELYNV 415
Query: 418 -----RYYESKFDVPKDDI-AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
R Y ++F D+I AF+ V YV GL WVL YY+ GC SW W++PF+YAP A
Sbjct: 416 ENSYYRQYFNEFPNTLDEIKAFKEKVVLSYVEGLVWVLNYYHNGCISWVWFYPFYYAPLA 475
Query: 472 SDFINIAEVDTNFETG 487
DF NI ++ +F+ G
Sbjct: 476 IDFNNIPDLHIDFQPG 491
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
SPIIDFYP +F+ID + + G+A L F+D +RL A A + L+
Sbjct: 525 SPIIDFYPVEFEIDTKDPHY-FDGIAELGFIDHQRLLDATASIKKSLA 571
>gi|343426938|emb|CBQ70466.1| probable KEM1-multifunctional nuclease [Sporisorium reilianum SRZ2]
Length = 1481
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 232/372 (62%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP +I +E+ KIP EFDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYP-LISQLIEE-------NKIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +KE E I+EK G +LP E+ FDSNCITPGTPFMA+LS L Y+
Sbjct: 102 FRTAKEAKE-------IKEKAERRGEVLPEEEA----FDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D W+ ++VILS +VPGEGEHKIM+YIR +AQPD++PN +HCL G DADLI
Sbjct: 151 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLSKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q G K L+++ F
Sbjct: 211 MLGLLSHDPHFCLLREEV------------QFGPRRKSKGSLESQ-------------NF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYL+ E +LPFPY FER +DD++ + FVGNDFLPHLP L I EGA
Sbjct: 246 FLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLHINEGA 305
Query: 357 VDRLVNLYKKTV 368
+D L +YK+ +
Sbjct: 306 MDLLFTIYKQIL 317
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
DE EE+ + +K YY+ K ++ ++ + Y+ GL WVL YYY G
Sbjct: 522 DEVDPEEDYKQRLATQMAAWKKDYYKEKLEIDYNNDDDMSKLAFRYIEGLQWVLHYYYDG 581
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++ +HYAP SD N ++ FE G
Sbjct: 582 VASWGWFYDYHYAPKISDLKNAGQMKFEFELG 613
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F+ DLNGKK W+ V +PF+DE+RL +AL L +EE
Sbjct: 646 NSPIIDFYPNNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEE 697
>gi|322801303|gb|EFZ21990.1| hypothetical protein SINV_11797 [Solenopsis invicta]
Length = 1572
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 277/556 (49%), Gaps = 126/556 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEVVKE---HQIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+HP D + +EMM IF I+ LF ++RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDICFRISEEMMFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
R++K+ A I+E K +A G +P EK FDSNCITPGT FMA+L L +
Sbjct: 102 RSAKD--------AEIQEAKAIAKGVQIPTEKR----FDSNCITPGTLFMAKLGDLLKRF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ D GWK K++ S A VPGEGEHKIMDYIR +A D+D N++HCL G DADLI
Sbjct: 150 VEYKISVDEGWKKCKILFSGAEVPGEGEHKIMDYIRYMKASEDYDSNSRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEPNF+++REE K + + V T E +F
Sbjct: 210 MLGLCSHEPNFSLLREEVKFGK--------------------------QQVKTTPEETKF 243
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH---------- 346
+ LS+LR+Y+E E + L FP+ E+ +DDWV M F VGNDF+PH
Sbjct: 244 CLLHLSLLRKYIEHEFSPIKDKLSFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIANGA 303
Query: 347 -----------LPSLE-------------------------------------IREGAVD 358
LP+LE E
Sbjct: 304 LPILYRAYMEVLPTLEGYINEAGTLQLDRFEKFMEKLSRLDVEQFNEHYADIKFFEAKTG 363
Query: 359 RLVNLYKKTVYKTQE-------QLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
R N ++ VYK E + Q ++ + + D+D ++E +D +
Sbjct: 364 RRPNESERHVYKKLEDSNSVSPKKTQNKDLDALIKSTTEMYRDMDLMIDDESDSDIYNME 423
Query: 412 EDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
K YY +K + D YV + W L YYY GC SW WY+P HYAP+
Sbjct: 424 FVQHKKDYYMNKLEYENVDEEVLRSQAEGYVRAIQWNLHYYYHGCCSWSWYYPHHYAPYI 483
Query: 472 SDFINIAEVDTNFETG 487
SD + ++ FE G
Sbjct: 484 SDIKDFKDLKLEFELG 499
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII +YP +FK DLNGK+ W+ V L+PF+DE+ L A+ P+ +L++EE
Sbjct: 531 ESSPIISYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLSAMQPHLSRLTMEE 583
>gi|410971335|ref|XP_003992125.1| PREDICTED: 5'-3' exoribonuclease 1 [Felis catus]
Length = 1672
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/505 (38%), Positives = 277/505 (54%), Gaps = 78/505 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRL--WEDG 414
+ L Y + + + ENG ++ + + E S V L +E
Sbjct: 307 LPLLYGTYITILPELGGYIN--ENGHLNLPRFEKYLVKLSDFDREHFSEVFVDLKWFESK 364
Query: 415 FKDRYYE----------SKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRS--WKWY 462
++Y + K+ A +L+ ++LGL + K Y + + Y
Sbjct: 365 VGNKYLNEAAGVAAEEAKNYKEKKNQRARKLL----HMLGLKTLAKTYSDTTSTPIFVMY 420
Query: 463 FPFHYAPFASDFINIAEVDTNFETG 487
+P+HYAPF SD NI+ + +FE G
Sbjct: 421 YPYHYAPFLSDIRNISTLKIHFELG 445
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 477 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 529
>gi|115446147|ref|NP_001046853.1| Os02g0481900 [Oryza sativa Japonica Group]
gi|47848619|dbj|BAD22468.1| putative 5'-3' exoribonuclease [Oryza sativa Japonica Group]
gi|113536384|dbj|BAF08767.1| Os02g0481900 [Oryza sativa Japonica Group]
Length = 822
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 287/544 (52%), Gaps = 125/544 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F+RWL +YPS++ P S+P + +DNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVS---------------PAKESRPADGIVVYDNLYLDMNQIIH 45
Query: 61 PCTHPEDK-------PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN- 112
HP+D+ AP E+ ++F+ +DRLFRIVRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
+R RRF + E E + +I E + D N ITPGT FM ++S
Sbjct: 106 MRRGRRFAWASEEEE----MQKISEGV----------------SDPNVITPGTEFMEKIS 145
Query: 173 ACLHYYIHDRLNN-DPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
L YYI RLN+ DPGWK I VILSDANVPGEGEHKIM +IR QR+ +DPNT+HCL
Sbjct: 146 QALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLF 205
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIML LA+HE +F+I+RE+ ++ E A+P
Sbjct: 206 GHDADLIMLALASHEVHFSILRED---------------NSQLTE-----ADP------- 238
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
E +++F+ + VLREYLE EL + + ER +DD++F+CF +GNDF+PH+PSLE
Sbjct: 239 ---EKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLE 295
Query: 352 IREGAVDRLVNLYKKTVYKTQ--------------------------EQLRQEENGGGGG 385
++E A+D L+ +YK T K QL E
Sbjct: 296 MKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEKIFLK 355
Query: 386 R------GVKRSFDDV-DESSE----------------EEESNDEVRLWEDGFKDRYYES 422
R +K+S DV E+SE EE D++RL G+K R+Y
Sbjct: 356 RYELEQESLKKSCRDVLREASESERLELSRKLEDRFFNEERPYDKLRLGLPGWKSRFYRE 415
Query: 423 KFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
F + + L + +Y+ GLCW+L+YY SW WY+PF+ APF SD +
Sbjct: 416 YFGIETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSNCRF 475
Query: 481 DTNF 484
+ +F
Sbjct: 476 EISF 479
>gi|452820477|gb|EME27519.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 1343
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 273/541 (50%), Gaps = 107/541 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP I + DN YLD NGI+H
Sbjct: 1 MGVPKFYRWVSERYPLTI-------------------HKVVPSVVPDVDNFYLDANGILH 41
Query: 61 PCTHPEDKPAP-----KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
C P+D P E+E+ + F ID LF +VRP++L+Y+AIDGVAPRAKMNQQR
Sbjct: 42 NCARPKDSQEPFPCQYPSEEEIFLETFNYIDMLFSMVRPKRLVYIAIDGVAPRAKMNQQR 101
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
+RRFR +K+ A+++ E + G +P FDSNCITPGT FMA S L
Sbjct: 102 ARRFRTAKDRAQEM-------ENRIKQGKPVPQR-----FFDSNCITPGTHFMASFSEAL 149
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y +H ++ D W ++VILS NVPGEGEHKI++YIR+++ + + N HCL G DA
Sbjct: 150 EYLVHKKITEDKSWATVEVILSTTNVPGEGEHKIIEYIRRKKLSGEWEANLSHCLYGLDA 209
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIML L THEP+F ++RE+ ++ K + ++A P +
Sbjct: 210 DLIMLSLVTHEPHFILLREQTD---------LSKLFVSKKGNLAVEATPLDRCI-----S 255
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
EF F + VLREYL+ E + F Y+ E + D++FMCF VGNDFLP LP+L I EG
Sbjct: 256 GEFEFFSIGVLREYLDSEFCTLPITF-YNLENCIHDFIFMCFLVGNDFLPQLPTLNIAEG 314
Query: 356 AVDRLVNLYKK---------------------------------TVYKTQEQLRQEENGG 382
A+D ++ LYKK V + E + Q +
Sbjct: 315 ALDTMLTLYKKLLPLFGGYLIENGNIVLERLEIFLSKLGLLERLIVNRRLEAIAQSKGRA 374
Query: 383 GGGRGVKRSFDDV-------DESSEE-----------EESNDEVRLWE-----DGFKDRY 419
+ S DD+ +E++EE E++ +E + + K Y
Sbjct: 375 PRMVDIGTSHDDIWGLGNDCNENTEETGIEPWTKEDIEQALNEAYVASTDPLMESIKKSY 434
Query: 420 YESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAE 479
Y K ++ +D + Y+ GL W KYYY GC SW+W++P+HYAP ASD + +
Sbjct: 435 YRDKLNMDLEDKDSLEKLKFTYLKGLLWTWKYYYSGCPSWRWFYPYHYAPMASDLVGLTG 494
Query: 480 V 480
V
Sbjct: 495 V 495
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI FYP DF++D++GK+ AW+GV LPFVDE L +A +L EE
Sbjct: 536 KSSPIFRFYPSDFEVDMDGKRNAWEGVIKLPFVDESLLLEAYHSIPNELFSEE 588
>gi|413918977|gb|AFW58909.1| hypothetical protein ZEAMMB73_438738 [Zea mays]
Length = 795
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 201/545 (36%), Positives = 286/545 (52%), Gaps = 121/545 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F++W+ KYPS+I V+D+P+E P+G+ +DNLYLDMN IIH
Sbjct: 1 MGIPSFYKWVVSKYPSII-SPVKDEPEEC-------------PDGIIYDNLYLDMNCIIH 46
Query: 61 PCTHPEDKPA--------PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
C HP+D+ P +E+ ++FE +DRLFRIVRP LLY+A+DGVAP AKMN
Sbjct: 47 CCFHPQDQLTHADIDVRPPTTANEVFESMFEYMDRLFRIVRPTSLLYLAVDGVAPFAKMN 106
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
+ R RF ++ E++AE P +E D N I+PGT FM ++S
Sbjct: 107 RIRRGRFHSA---MERLAE---------------EPPREISEVSDPNVISPGTEFMEKVS 148
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L YYI R N+DP W+ I VILSDA+VPGEGEHKIM +IR Q + +DPNT+HCL G
Sbjct: 149 EALEYYIRARFNSDPWWRDIMVILSDASVPGEGEHKIMSFIRAQCSMEGYDPNTRHCLFG 208
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIML LA+HE F+I+RE DV Q E E NP+
Sbjct: 209 HDADLIMLALASHEVYFSILRE----------DVLYQNQEE--------TEGNPKK---- 246
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F+F+ + VLREYLE E + + ER +DD++F+CF +GNDF+PH+PSL+
Sbjct: 247 ----SFLFLNMWVLREYLEIEFKILDPVCETDIERLIDDFIFICFLMGNDFIPHIPSLKT 302
Query: 353 REGAVDRLV----------------------------------------NLYKKTVYKTQ 372
+EGAVD L+ ++Y+ ++ +
Sbjct: 303 QEGAVDLLIEVYKTTFNKMGGYITNTDKVKDKYGAYLEVSRLETFFHELSMYEDKIFLKR 362
Query: 373 EQLRQE-----------ENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYE 421
L+Q+ E +++ DD+ EE D +RL G+K R++
Sbjct: 363 YDLKQDSLLETYHEMLREAPESERPELRQKLDDL--LFNEENPYDSIRLGLPGWKSRFFR 420
Query: 422 SKFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAE 479
F +L + +Y+ GLCWVL+ Y+ SW WY+PF+ APF SD ++
Sbjct: 421 EHFGAKTSSEIGKLQNDMAQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSR 480
Query: 480 VDTNF 484
++ +F
Sbjct: 481 IEISF 485
>gi|326327749|pdb|2Y35|A Chain A, Crystal Structure Of Xrn1-Substrate Complex
Length = 1140
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 278/545 (51%), Gaps = 116/545 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HCIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E+++ IF +D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E ++ A+ A+ E + FDSNCITPGT FM RL L +
Sbjct: 102 FRTAREAEQQEAKAAQ------------RGELREHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR + QPD+DPNT+HCL G DA LI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDAALI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E A+ + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNAL 303
Query: 358 DRL--------------------VNLYKKTVYKTQ------EQLRQEENGGGGGRGVKRS 391
L +NL + ++ + + ++ + +
Sbjct: 304 PLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNNKSEA 363
Query: 392 FD-DVDESSEEEESNDE-------------------------VRLWE-DGFKDRYYESKF 424
FD DV E +E + + + V L E +K +Y +KF
Sbjct: 364 FDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKF 423
Query: 425 DV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
P D++ L H YV L WVL YYY+G +SW WY+PFHY PF SD NI +V+
Sbjct: 424 KRDPNDELIEELC--HHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEIA 481
Query: 484 FETGT 488
F GT
Sbjct: 482 FHMGT 486
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKI 678
K +Q E F M ++ + A S K SP+ +FYP +F+
Sbjct: 472 LKNIEQVEIAFHMGTPFLPFQQLLAVLPAASAKLLPVAYHDLMLLPTSPLAEFYPLEFES 531
Query: 679 DLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DLNGKK W+ V L+PF+DE RL A+ P +LS+EE E
Sbjct: 532 DLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERE 571
>gi|222615546|gb|EEE51678.1| hypothetical protein OsJ_33030 [Oryza sativa Japonica Group]
Length = 954
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 186/391 (47%), Positives = 241/391 (61%), Gaps = 36/391 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME----FDNLYLDMN 56
MGVP+F+RWL KYP+++ N SS NG + NLYLDMN
Sbjct: 1 MGVPSFYRWLVGKYPAIV--------SPANDDDDDVGSSS---NGAAAPPVYHNLYLDMN 49
Query: 57 GIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
GIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+DGVAPRAKM
Sbjct: 50 GIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKM 109
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHF-DSNCITPGTPFMA 169
NQQR+RRF+++ + E +R++ A+G +LP E S D N IT GT FM
Sbjct: 110 NQQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMD 169
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+LS L YYI RLN+DP WK I VILSDANVPGEGEHKIM +IR QR + +DPNT+HC
Sbjct: 170 KLSDALKYYIRARLNSDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHC 229
Query: 230 LCGADADLIMLGLATHEPNFTIIREEF--KPNQAR-----PCDVCGQMGHEMKECVGL-- 280
L G DADLIML LA+HE +F+I+REE + NQ P Q + K C
Sbjct: 230 LYGLDADLIMLALASHEVHFSILREEVLHQNNQENTIPITPKTFTSQEAEKFK-CRAWFP 288
Query: 281 -DAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFV 339
E PE +T + + F+ + VLREYLE ++ +PN ER +DD+VF+CF
Sbjct: 289 RITEARPEGKLT---KKPYQFLNIWVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLT 345
Query: 340 GNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
GNDF+PH+PSLEI EGA+D L+ +YK + K
Sbjct: 346 GNDFIPHIPSLEIHEGAIDLLIEVYKTSFNK 376
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
+D+++L G+K R+++ KFD KD+IA + + +Y+ GLCWVL YY+ SW WY
Sbjct: 527 HDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWY 586
Query: 463 FPFHYAPFASDFINIA 478
+PF+YAPFASD ++
Sbjct: 587 YPFYYAPFASDVRGLS 602
Score = 46.2 bits (108), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I FYP + ID +GK++ WQG+A LPF++++ L + L+V E
Sbjct: 619 ESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHE 670
>gi|443895364|dbj|GAC72710.1| predicted hydrolases or acyltransferases [Pseudozyma antarctica
T-34]
Length = 1939
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 231/372 (62%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP +I +E+ KIP EFDNLYLDMNGIIH
Sbjct: 150 MGIPKFFRFMSERYP-LISQLIEE-------NKIP-----------EFDNLYLDMNGIIH 190
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 191 NCSHPNDNDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 250
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +KE E I+EK G ILP E+ FDSNCITPGTPFMA+LS L Y+
Sbjct: 251 FRTAKEAKE-------IKEKAERRGEILPDEEA----FDSNCITPGTPFMAKLSQQLEYF 299
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D W+ ++VILS +VPGEGEHKIM+YIR +AQP ++PN +HCL G DADLI
Sbjct: 300 IAKKITEDADWRNVQVILSGHDVPGEGEHKIMEYIRLCKAQPGYNPNVRHCLYGLDADLI 359
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q G K L+++ F
Sbjct: 360 MLGLLSHDPHFCLLREEV------------QFGPRRKSKGSLESQ-------------NF 394
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYL+ E +LPFPY FER +DD++ + FVGNDFLPHLP L I EGA
Sbjct: 395 FLLHLSLFREYLDLEFQDLRSSLPFPYEFERIIDDFILLNIFVGNDFLPHLPGLHINEGA 454
Query: 357 VDRLVNLYKKTV 368
+D L +YK+ +
Sbjct: 455 MDLLFGIYKQIL 466
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 25/136 (18%)
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWED 413
+ AVDR++ Y K T S DDVD EE+ +
Sbjct: 659 DAAVDRVLGRYLKAKVDTA------------------SDDDVDP---EEDYRKRLDAQMT 697
Query: 414 GFKDRYYESK--FDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+K YY+ K FD D+ +L Y+ GL WVL YYY G SW W++ +HYAP
Sbjct: 698 EWKKDYYKQKLEFDYSNDEAMSKL--AFRYIEGLQWVLHYYYDGVASWGWFYDYHYAPKI 755
Query: 472 SDFINIAEVDTNFETG 487
SD N+ ++ FE G
Sbjct: 756 SDLKNVGQMKFEFELG 771
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F+ DLNGKK W+ V +PF+DE+RL +AL L +EE
Sbjct: 804 NSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLEALDKREVYLGIEE 855
>gi|407036110|gb|EKE38009.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 779
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/415 (44%), Positives = 247/415 (59%), Gaps = 46/415 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FF WL++KY S+ C + E + D S PNPNG+E+DN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKGSSIEND------DLSSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D+ P+ ++ V + + ID + IVRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTQYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHF-----DSNCITPGTPFMARLSACL 175
++ + E EK S F DSNCITPGT FM +S +
Sbjct: 115 TAQSMVNQSFE-------------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVI 155
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YI +R+N+ W I VI SD++VPGEGEHKI+D+IR+Q+ +++P +HC+ G DA
Sbjct: 156 KAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDA 215
Query: 236 DLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
DLIML LATHE F+IIR+ KP N+ C +CG+ H C + P IT
Sbjct: 216 DLIMLALATHERYFSIIRD--KPYNKGDKCYICGEY-HSSDSCKNYN-RVAPLDPIT--- 268
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FIFV VLR+YL + + Y FER LDD++F CF VGNDFLPH+PSL+I+E
Sbjct: 269 -KPFIFVDCHVLRQYLNNTIRVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQE 323
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR 409
GA+D L+ +Y K + E ENG + VKR V + ++ N +R
Sbjct: 324 GAIDILIKIYLKFL---PENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLR 375
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
EE +DE++L E G+++RYY+ KF V K + + + YV GL WV YYY+GC+SW
Sbjct: 447 EELKHDEIQLGEQGYEERYYQQKFHVDYKKEKNIIIEIVDSYVEGLNWVFSYYYEGCQSW 506
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFET 486
WY+P++YAPFA D + +D FE
Sbjct: 507 DWYYPYYYAPFAKDIGKL--LDPEFEV 531
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYPEDFKID+NG++ ++ +AL+ F++++ L + P ++L ++ +
Sbjct: 570 SPLSNFYPEDFKIDMNGERSFYKAIALIGFINQKELLNVVEPIEKELGKKDQQ 622
>gi|340054861|emb|CCC49169.1| putative 5'-3' exonuclease XRNA [Trypanosoma vivax Y486]
Length = 1411
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/539 (38%), Positives = 284/539 (52%), Gaps = 82/539 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ +YPSVI IPF P + DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERYPSVI---------------IPFRDFPP-----QIDNLYLDMNGIIH 40
Query: 61 PCTHPED---KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C+HP D K E EM ++F +++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCSHPNDVDAKHKAPTELEMAKSMFVYLEKLFNAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E + RE+ LA G +P E + FDSNCITPGT FM R+S Y
Sbjct: 101 RYRSGYE-------LMIAREEALARGEEIPEEHDV---FDSNCITPGTDFMVRISEHFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ DP W+ +I S + PGEGEHKI+D+IR+ + QP + PN HC+ G DADL
Sbjct: 151 FITMKVSTDPAWQKCNIIYSGHDHPGEGEHKIVDFIRRNKMQPGYSPNESHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+ML LATHEPNF ++RE F +++R E KE + +S
Sbjct: 211 VMLALATHEPNFVLLREVVSFGSSESRRL-------REQKEADKANGFVVDKSYHVPDEF 263
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V F L + ++ LP Y FER +DD+V MCFFVGNDFLP +P+L I +G
Sbjct: 264 VLFHLNLLRDYLDLDLRDKVGAGLPVSYDFERVVDDFVLMCFFVGNDFLPSIPTLSINDG 323
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDE-------SSEEEESNDEV 408
++ ++++Y V K L +E G R V+ + E + E +E +
Sbjct: 324 SLVHMLDIYASRVLKANMYLTEE--GRINWRTVELWIQGLAELEFSTIKAREAKEKEYQR 381
Query: 409 RLWE------------------DGFKDRYYESK------FDVPKDDIA-FRLMVGHEYVL 443
+L + +KD++Y K +D +IA RL YV
Sbjct: 382 QLARRDPSYEAPAVLTKNFESLNEYKDQFYREKHGFDNGWDPQGKEIADLRL----HYVE 437
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVD--TNFETGTQPVNNNRILKFI 500
GL WV YYY G SWKW+FP HYAP SD +N+ V +FE G + + ++L +
Sbjct: 438 GLVWVYGYYYHGPPSWKWFFPHHYAPMVSDLVNLPAVANRVSFEVGEPFLPHQQLLAVL 496
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SP+ ++PE KID G + +W+G+ L+PF+DE L A + ++++ E+
Sbjct: 515 KGSPLARYFPEQLKIDREGARASWEGIVLIPFIDERTLLAAFSSVQDRVTPED 567
>gi|388851631|emb|CCF54627.1| probable KEM1-multifunctional nuclease [Ustilago hordei]
Length = 1481
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 232/372 (62%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP +I +E+ KIP EFDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRFMSERYP-LISQLIEE-------NKIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D A E ++ +A+F I+ LF ++P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPNDSDASFRITETQIFLAVFAYIEHLFHKIKPKKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +KE E I+EK G +LP E+ FDSNCITPGTPFMA+LS L Y+
Sbjct: 102 FRTAKEAKE-------IKEKAERRGEVLPEEEA----FDSNCITPGTPFMAKLSQQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D W+ ++VILS +VPGEGEHKIM+YIR +AQPD++PN +HCL G DADLI
Sbjct: 151 IAKKITEDADWRNVQVILSAHDVPGEGEHKIMEYIRLCKAQPDYNPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q G K L+++ F
Sbjct: 211 MLGLLSHDPHFCLLREEV------------QFGPRRKSKGSLESQ-------------NF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYL+ E +LPF Y FER +DD++ + FVGNDFLPHLP L I EGA
Sbjct: 246 FLLHLSLFREYLDLEFQDLRSSLPFTYDFERIIDDFILLDIFVGNDFLPHLPGLHINEGA 305
Query: 357 VDRLVNLYKKTV 368
+D L ++YK+ +
Sbjct: 306 IDLLFSIYKQIL 317
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
DE+ EE+ + + +K YY+ K ++ D + Y+ GL WVL YYY G
Sbjct: 526 DEADPEEDYKKRLDVQMTAWKKDYYKEKLEIDYSDDEAMGKLAFRYIEGLQWVLHYYYDG 585
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++ +HYAP SD N+ E+ FE G
Sbjct: 586 VASWGWFYDYHYAPKISDLKNVGEMKFEFELG 617
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F+ DLNGKK W+ V +PF+DE+RL AL L +EE
Sbjct: 650 NSPIIDFYPSNFEADLNGKKQDWEAVVKIPFIDEKRLLDALNKREIYLGIEE 701
>gi|238593916|ref|XP_002393329.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
gi|215460659|gb|EEB94259.1| hypothetical protein MPER_06950 [Moniliophthora perniciosa FA553]
Length = 332
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/278 (56%), Positives = 201/278 (72%), Gaps = 5/278 (1%)
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLAD--GCILPP 148
+VRPRKLL+MAIDGVAPRAKMNQQRSRRFRA++E EK E AR+ L + G +
Sbjct: 1 MVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAQEAKEK--EEARLESVRLWEEMGKTISE 58
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
+++ +DSN ITPGTPFM L+A L Y++ ++N+DPGWK ++VI+SDA+VPGEGEHK
Sbjct: 59 DEKNKKAWDSNAITPGTPFMTLLAASLRYWVVQKMNSDPGWKNLQVIISDASVPGEGEHK 118
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE-FKPNQARPCDVC 267
IMDYIR+QR P HDPNT+H + G DADLIML LATHEP F ++RE+ F + C +C
Sbjct: 119 IMDYIRRQRTNPGHDPNTRHVIYGLDADLIMLALATHEPYFRVLREDVFSDSSNMACRMC 178
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
GQ GH +C AE + FIF+ +S+LREYLE EL +P PFP++ E+
Sbjct: 179 GQEGHYAAQCTATPAEVQERAKKKVTERKPFIFLDVSILREYLEAELNVPQTPFPFNLEQ 238
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYK 365
A+DDWV + FFVGN FLPHLPSLEIREGA+D L+ ++K
Sbjct: 239 AIDDWVLLIFFVGNAFLPHLPSLEIREGAIDTLLRIWK 276
>gi|399949668|gb|AFP65326.1| dhm exonuclease [Chroomonas mesostigmatica CCMP1168]
Length = 549
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 195/503 (38%), Positives = 271/503 (53%), Gaps = 71/503 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + +E+ +FD YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLINQRLLENN---------------------QFDCFYLDMNGIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+ ++ + E+E+ IF D LFRIVRPRKL+Y+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 NCSQKNNEIGTQYEEELFRKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ KE + KL + + P E + +FDSNCITPGT FM RLS ++
Sbjct: 100 SVKELE---------KTKLTQEKNV-PLENFEKKYFDSNCITPGTTFMKRLSQSFKKWLA 149
Query: 181 DRLNNDPGW-KGIKVILSDANVPGEGEHKIMDYIRK-QRAQPDHDPNTQHCLCGADADLI 238
++ NDP W +G +I S + VPGEGEHKIM+YIRK Q+++ + +HCL G DADLI
Sbjct: 150 KKIRNDPEWQQGCDIIFSGSEVPGEGEHKIMNYIRKIQKSKSRKITSLRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL HE FT++RE+ P+ + D + + F
Sbjct: 210 MLGLVAHENQFTLLREKLIWKGTPSSNKSVDFFKRKDN-------------------FAG 250
Query: 295 EVEFIFVRLSVLREYLEKELA-MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ EF + +S+LR+ L E F Y+ ER +DD++F+C +GNDFLP LP L+I
Sbjct: 251 D-EFHLLEISLLRDMLYLEFKPKERCEFDYNIERIVDDFIFICMLIGNDFLPSLPHLDIA 309
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEE------EESNDE 407
G ++ LV Y++ KT+ L + G V+ + + +EE + + E
Sbjct: 310 SGGLNLLVRSYQEIQLKTKGYLTSKHRMHIG--RVELFLEKISNEAEEFFFVQKKNFDKE 367
Query: 408 VRLWEDGFKDRYYESK--FDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
W +K YY +K FD+ K+ F ++ Y+ GL W L YY+ GC SW WY+P
Sbjct: 368 KEPW--NYKKDYYSTKLMFDIFSKESDKFLSILITNYIHGLNWCLYYYHLGCPSWNWYYP 425
Query: 465 FHYAPFASDFINIAEVDTNFETG 487
+Y P ASD N+ ++ NF G
Sbjct: 426 EYYTPLASDLKNLYKIKINFTKG 448
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 626 ETMFKMRNKMKKRRERQMKMAAQSTKAP---SFIPGG---QFAPQDSPIIDFYPEDFKID 679
+ ++K++ K R + M S P SF+P ++SPI++FYP ++KID
Sbjct: 436 KNLYKIKINFTKGRPFEPLMQLLSVLPPNSSSFLPKSFENLMIQKNSPILNFYPLNYKID 495
Query: 680 LNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
LNGKK W+G+ +LPF+D+++L A+ Y +K + E E
Sbjct: 496 LNGKKNLWEGIVVLPFIDQKKLSDAVKRYGKKQNFNEDE 534
>gi|403331887|gb|EJY64917.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1130
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 180/390 (46%), Positives = 226/390 (57%), Gaps = 71/390 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV---NGQKIPFDSSKPNP-------------- 43
MGVPAFFRWLS +YP V ++ + D+ E + +K D+ PN
Sbjct: 1 MGVPAFFRWLSVRYPKVAINALSDEDLEHLYDDFKKTSDDNKDPNEINLLDGDLDGEIEK 60
Query: 44 ----NGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 99
N EFDNLYLDMNGIIHPCTHP+DKP P E EM IF+ D++ +IVRP++L+Y
Sbjct: 61 RVRENNPEFDNLYLDMNGIIHPCTHPQDKPQPTSETEMFNNIFDYTDKIMKIVRPQRLIY 120
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK----GSH 155
MA+DGVAPRAKMNQQRSRRFR + +T E+ IR K +G +K++
Sbjct: 121 MAVDGVAPRAKMNQQRSRRFRGALDTEEREQREEEIRGKWSKEGIKFSQKKDEEDGDSDK 180
Query: 156 FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRK 215
FD N ITPGT FM RLS L YY+ +RL D WK IKVI SDA+ PGEGEHKI+D+IR
Sbjct: 181 FDQNVITPGTEFMFRLSKALQYYVMERLQTDSLWKDIKVIFSDASNPGEGEHKILDFIRS 240
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
QR Q ++PNT+HC+ GADADLIMLGL+THEP+F I+RE + + C CGQ GH
Sbjct: 241 QRLQAGYNPNTRHCIYGADADLIMLGLSTHEPHFAILREAVLMDSDKKCTYCGQNGHLNS 300
Query: 276 ECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFM 335
EC + NP+ I G +V+
Sbjct: 301 EC-----KSNPD--IAGGPKVQLS------------------------------------ 317
Query: 336 CFFVGNDFLPHLPSLEIREGAVDRLVNLYK 365
NDFLPHLPSL IREGA+D ++ +YK
Sbjct: 318 ---RSNDFLPHLPSLHIREGALDAILVIYK 344
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
D+V+ +G+K RYY+ KF + +D F + Y+ GL WV YYY+GC SW W++P
Sbjct: 540 DKVKFGTEGWKLRYYQDKFHIDVNDFQEFTDKIKQAYIEGLQWVYSYYYKGCVSWYWFYP 599
Query: 465 FHYAPFASDFINIAEVDTNFETGT 488
+HYAPFASD +N V FE G
Sbjct: 600 YHYAPFASDLVNCDRVKIKFEMGV 623
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
S IIDFYP DF++D+NG ++AW GV LLPF+D +RL KA+
Sbjct: 656 SEIIDFYPIDFRLDINGARYAWMGVNLLPFIDRQRLIKAM 695
>gi|213407328|ref|XP_002174435.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|212002482|gb|EEB08142.1| 5'-3' exoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 1322
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/372 (46%), Positives = 224/372 (60%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+S +YP Q V +IP EFDNLYLDMNGI+H
Sbjct: 1 MGIPKFFRWMSERYPLC--------SQLVQDDRIP-----------EFDNLYLDMNGILH 41
Query: 61 PCTHPED--KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D A ED+M +AIF I+ LF+ ++P+KLLYMA+DG APRAKMNQQRSRR
Sbjct: 42 NCTHKNDDHSSAALPEDQMYIAIFNYIEHLFQKIKPKKLLYMAVDGCAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +K+ + + R E + D FDSNCITPGT FM R+S LHY+
Sbjct: 102 FRTAKDAYDARRKAERNGEVIAEDP------------FDSNCITPGTVFMQRISEQLHYF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W G+++ILS + PGEGEHKIM+YIR Q+AQP+++PNT+HCL G DADLI
Sbjct: 150 IQKKVSEDSDWSGVQIILSGHDCPGEGEHKIMEYIRTQKAQPNYNPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE AR +S + +F
Sbjct: 210 MLGLLSHDPHFCLLREEVTFGPAR------------------------KSASKELANQKF 245
Query: 299 IFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYLE E NLPF Y ER +DD++ + FFVGNDFLP+LP L I EGA
Sbjct: 246 YLLHLSLLREYLEAEFEECRDNLPFAYDLERIIDDFILLAFFVGNDFLPNLPGLHINEGA 305
Query: 357 VDRLVNLYKKTV 368
+ + N+YK +
Sbjct: 306 LALMFNVYKSVL 317
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 393 DDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVL 449
D+ + SEE+ +E GF KD YY SK D + YV GL WVL
Sbjct: 477 DNTTKDSEEK--------FEKGFEMWKDNYYRSKVGFSYYDEKELEQMAKRYVEGLQWVL 528
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YYY+GC+SW W++ +HY+P SD F+ G
Sbjct: 529 FYYYRGCQSWGWFYDYHYSPKISDVRRGLRFGITFDMG 566
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 645 MAAQSTKAPSFIP---GGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
MA ++ S +P +SPIIDFYPE+F++D N KK +W+ V +PF++E RL
Sbjct: 576 MAVLPARSKSLVPPCYRDLMTDPNSPIIDFYPENFELDQNEKKASWEAVVKIPFIEETRL 635
Query: 702 HKALAPYYEKLSVEE 716
AL L+ E
Sbjct: 636 QDALKSREHLLTAAE 650
>gi|253743695|gb|EET00027.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 900
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 212/613 (34%), Positives = 303/613 (49%), Gaps = 138/613 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP----QEVNGQKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP+FFRW+ ++Y SVI + +E P ++G +P G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVLEAFPDTYEANIDGDALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPC HPE + P+ E E+ IF+ +DR+ I RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRAQPQTEAEVFEEIFQVLDRVVSICRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKETAEKIAEVARIREK-LLADGCILPPEKEKGS------------HFDSNCITP 163
RRF A+ E +I E R++E+ L++ G + P K+ GS + DSN ITP
Sbjct: 113 RRFMAAYE--RQIKE--RVQERRLMSFGDVEPSLKKLGSEMNDATESTAQTNLDSNAITP 168
Query: 164 GTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHD 223
GTPFM+RLS L YY+ +R N W+ + V+ +DA PGEGEHKIM ++R QR+QP +D
Sbjct: 169 GTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRVQRSQPGYD 228
Query: 224 PNTQHCLCGADADLIMLGLATHEPNFTIIREEF-KPNQARPCDVCGQM------------ 270
P T HC+ G DADLIML L THEPNF I+R+ N R C CG +
Sbjct: 229 PCTIHCIYGLDADLIMLALGTHEPNFLILRDVVDTANLKRTCTRCGHLRISSEHNTGTVD 288
Query: 271 --GHEMKECVGLDAEPNPESV---ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSF 325
++ G+D P S + F S +F+ V S LREYL++E ++ F
Sbjct: 289 PFTTRHEDQGGMDCPFYPGSSLRPVAFRSPFQFLHV--SRLREYLQREFDATDV----IF 342
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKT------------------ 367
ERA+DD+VF+ F VGNDFLPH+ L+IRE AV R++ YK+
Sbjct: 343 ERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQLKRSRKIGFLTTGSDVNIG 402
Query: 368 -VYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEV------------------ 408
+ +L ++E R ++ ++SE +S DE
Sbjct: 403 DFHVLLRELAEQEARIFKARASGKANARHAQASETPDSKDETPGERAVREYFQFFRKDDK 462
Query: 409 RLWEDGFKDRYYESKFDVPKDDIAFR-LMVGHE---------YVLGL------------- 445
R+ +D D Y +P +A + +++ +E Y LG+
Sbjct: 463 RIIKDAMDDYYALHDKPLPPTTVAVKHILIKYELEKPGYAQRYYLGIGLMDDFPEKNYES 522
Query: 446 ----------------------CWVLKYYY-QGCRSWKWYFPFHYAPFASDFINIAEVDT 482
WV +YY+ W WY+P+H++P D ++ T
Sbjct: 523 DKFKAELKQRIQTMCYHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPLLVDLAAASQTYT 582
Query: 483 NFETGTQPVNNNR 495
T Q +NR
Sbjct: 583 --RTWKQHTVSNR 593
>gi|67466694|ref|XP_649490.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465942|gb|EAL44104.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 779
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 184/415 (44%), Positives = 246/415 (59%), Gaps = 46/415 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FF WL++KY S+ C ++ E + D PNPNG+E+DN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D+ P+ ++ V + ID + IVRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHF-----DSNCITPGTPFMARLSACL 175
++ + E EK S F DSNCITPGT FM +S +
Sbjct: 115 TAQNMVNQSFE-------------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVI 155
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YI +R+N+ W I VI SD++VPGEGEHKI+D+IR+Q+ +++P +HC+ G DA
Sbjct: 156 KAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDA 215
Query: 236 DLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
DLIML LATHE F+IIR+ KP N+ C +CG+ H C + P IT
Sbjct: 216 DLIMLALATHERYFSIIRD--KPYNKGDKCYICGEY-HSSDSCKNYN-RVAPLDPIT--- 268
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FIFV VLR+YL + + Y FER LDD++F CF VGNDFLPH+PSL+I+E
Sbjct: 269 -KPFIFVDCHVLRQYLNNTIKVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQE 323
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR 409
GA+D L+ +Y K + E ENG + VKR V + ++ N +R
Sbjct: 324 GAIDILIKIYLKFL---PENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLR 375
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
EE +DE++L E G+++RYY+ KF V K + + + YV GL WV YYY+GC+SW
Sbjct: 447 EELKHDEIQLGEQGYEERYYQQKFHVDYKKEKNNIIEIVDSYVEGLNWVFSYYYEGCQSW 506
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFET 486
WY+P++YAPFA D + +D FE
Sbjct: 507 DWYYPYYYAPFAKDIGKL--LDPEFEV 531
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ FYPEDFKID+NG++ ++ +AL+ F+++++L + P ++L ++ +
Sbjct: 570 SPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQ 622
>gi|380020587|ref|XP_003694164.1| PREDICTED: 5'-3' exoribonuclease 1-like [Apis florea]
Length = 1627
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 288/568 (50%), Gaps = 144/568 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR+++ +YP C+ +K ++ +IP EFDNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYINERYP-----CLTEKLKDY---QIP-----------EFDNLYLDLNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D E+ + IF I LF +++P+KL ++AIDGVAPRAK+NQQRSRR
Sbjct: 42 ECSHPDDTDVTFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
F+A+K+ A+I+E K A G LP EK FDSNCITPGT FM++L L Y
Sbjct: 102 FKAAKD--------AQIQEAKAKAKGINLPKEKR----FDSNCITPGTLFMSKLDEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+ KVILS + VPGEGEHKIMDYIR +AQP++D NT+HCL G DADL
Sbjct: 150 FITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
IMLGL THE +FT++REE F Q + C PE E
Sbjct: 210 IMLGLCTHEIHFTLLREELTFGKKQRKVCLT-------------------PE-------E 243
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPH------- 346
+F LS+LREY+ E + LPF Y E+ +DDW+ M F +GNDF+PH
Sbjct: 244 TKFCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNLHII 303
Query: 347 --------------LPSLE--IREGAVDRL-------VNLYKKTVYKTQE---QLRQEEN 380
+P+L+ I E RL L + + + E L+ E+
Sbjct: 304 HGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFDILQFSEYYADLKYLES 363
Query: 381 GGGGGRGVKRSFDDVDESSEEEESNDEVRLW-------------------------EDGF 415
G RS + ++ +E++ SN+E+R EDG
Sbjct: 364 KTG------RSLIETEKLNEKKSSNEEIRSPKKVQDKEFDMLLRTAAEMSLGRYDDEDGG 417
Query: 416 KDR----------------YYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
D+ YY +K D F YV + W L YYY GC SW
Sbjct: 418 DDKSDSEMYTMEFVQCKKDYYINKLKYENIDEDFLRSQAEGYVRAIQWNLNYYYNGCCSW 477
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P HYAP+ SD + ++ FE G
Sbjct: 478 SWYYPHHYAPYISDIKDFKDLKLEFELG 505
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII++YP +F+ DLNGK+ W+ V L+PF++E+ L A+AP+Y KL++EE
Sbjct: 537 EQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPHYSKLTLEE 589
>gi|449708316|gb|EMD47799.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 779
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 184/415 (44%), Positives = 246/415 (59%), Gaps = 46/415 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FF WL++KY S+ C ++ E + D PNPNG+E+DN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYVSITNDCKKNSSIEND------DLLSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D+ P+ ++ V + ID + IVRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTRYIDYMVDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHF-----DSNCITPGTPFMARLSACL 175
++ + E EK S F DSNCITPGT FM +S +
Sbjct: 115 TAQNMVNQSFE-------------------EKKSVFKEKPIDSNCITPGTEFMEAVSKVI 155
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YI +R+N+ W I VI SD++VPGEGEHKI+D+IR+Q+ +++P +HC+ G DA
Sbjct: 156 KAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDA 215
Query: 236 DLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
DLIML LATHE F+IIR+ KP N+ C +CG+ H C + P IT
Sbjct: 216 DLIMLALATHERYFSIIRD--KPYNKGDKCYICGEY-HSSDSCKNYN-RVAPLDPIT--- 268
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FIFV VLR+YL + + Y FER LDD++F CF VGNDFLPH+PSL+I+E
Sbjct: 269 -KPFIFVDCHVLRQYLNNTIKVEK----YDFERCLDDFIFFCFLVGNDFLPHIPSLDIQE 323
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR 409
GA+D L+ +Y K + E ENG + VKR V + ++ N +R
Sbjct: 324 GAIDILIKIYLKFL---PENGYITENGTINFKIVKRFLHLVGKEEKQLLVNRRLR 375
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
EE +DE++L E G+++RYY+ KF V K + + + YV GL WV YYY+GC+SW
Sbjct: 447 EELKHDEIQLGEQGYEERYYQQKFHVDYKKEKNNIIEIVDSYVEGLNWVFSYYYEGCQSW 506
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFET 486
WY+P++YAPFA D + +D FE
Sbjct: 507 DWYYPYYYAPFAKDIGKL--LDPEFEV 531
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ FYPEDFKID+NG++ ++ +AL+ F+++++L + P ++L ++ +
Sbjct: 570 SPLSSFYPEDFKIDMNGERSFYKAIALIGFINQKKLLNVVEPIEKELGKKDQQ 622
>gi|327408309|emb|CCA30120.1| GF20490, related [Neospora caninum Liverpool]
Length = 1253
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 185/434 (42%), Positives = 241/434 (55%), Gaps = 75/434 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHC----VEDKPQEVNGQKI-------------PFDSSKPNP 43
MGVP F+RWL +YP V++ V+D +E+ ++ D S P
Sbjct: 1 MGVPTFYRWLCSRYPRVVIDVGDNHVQDMREEIRQKRERERARQETKENEETSDRSAPAA 60
Query: 44 NGME------------FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRI 91
E +D LYLDMNGIIHPC H +D P E+EM ++IF+ +DR+ I
Sbjct: 61 ENAEKTDQPDLEEEFGYDCLYLDMNGIIHPCCHTDDGSCPATEEEMFLSIFQYVDRIVDI 120
Query: 92 VRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKE 151
++PRKLLY+AIDGVAPRAKMNQQRSRRF+A+K+ E+ ++ + ++G +PP+K
Sbjct: 121 IQPRKLLYLAIDGVAPRAKMNQQRSRRFKAAKDIQEEEKAYEELKAQFESEGREVPPKKI 180
Query: 152 KGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMD 211
+ +DSN ITPGTPFM RL+ + YYI DRL W+G+KVI SDA VPGEGEHKIMD
Sbjct: 181 R---WDSNVITPGTPFMHRLAIAITYYIQDRLATRSSWQGLKVIFSDATVPGEGEHKIMD 237
Query: 212 YIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE---EFKPNQARPCDVCG 268
+IR+QR + PN +H L GADADLIMLGLATHE NF+I+RE + P Q C C
Sbjct: 238 FIRQQRKSGEFRPNLRHVLHGADADLIMLGLATHEANFSILREAVVDRTPEQV--CSTCN 295
Query: 269 QMGHEMKEC----VGLDAEPNPESVITF-----------------GSEVE---------- 297
+GH + C PE F G E+
Sbjct: 296 AVGHSAENCKGGFAAGAPAATPEEERAFQVLEQDKRGLKRHLEERGVELREDWAAGLESH 355
Query: 298 ------FIFVRLSVLREYLEKELAMPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
++L VLREYL E Y ER +DD+VF+CF GNDFLPHLP
Sbjct: 356 RRAWKPLQMLQLPVLREYLTYEFITQQAEGHSYDLERCIDDFVFLCFLCGNDFLPHLPHQ 415
Query: 351 EIREGAVDRLVNLY 364
I+ G++D LV+LY
Sbjct: 416 SIQRGSIDALVHLY 429
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 415 FKDRYYESKFDVP-----KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
++ +YY KF +P +D V Y++GL WVL YYYQGC S+ W+FPFHYAP
Sbjct: 667 WRQKYYRQKFHLPEESDRRDVETLASDVALAYIVGLQWVLLYYYQGCNSFDWFFPFHYAP 726
Query: 470 FASDFIN 476
A D +
Sbjct: 727 LAVDLAD 733
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S I DFYP D K+D N + WQ V LLPF+DE RL + P + L++EE E
Sbjct: 818 SAIADFYPADVKMDPNHQ---WQWVVLLPFIDENRLLRVCKPLEQFLTLEERE 867
>gi|195059493|ref|XP_001995648.1| GH17871 [Drosophila grimshawi]
gi|193896434|gb|EDV95300.1| GH17871 [Drosophila grimshawi]
Length = 1754
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 202/540 (37%), Positives = 267/540 (49%), Gaps = 111/540 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR +S +YP C+ + +E IP EFDNL+LD+NGI+H
Sbjct: 1 MGVPKFFRHISERYP-----CLSELARE---HSIP-----------EFDNLFLDVNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ I+ ID LF +++P+KL ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDGNIHFHLEETQIFQDIYNYIDTLFYLIKPQKLFFVSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E + I K L G EK FDSNCITPGT FM+RL L +
Sbjct: 102 FRTAREAEQ-------IDAKALQRG-----EKRMHERFDSNCITPGTGFMSRLQKGLRCF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ D W+ VILS PGEGEHKIMDYIR +AQPD DPN +HCL G DADLI
Sbjct: 150 LRTKVSTDTLWQKCCVILSGVETPGEGEHKIMDYIRYLKAQPDFDPNMRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGKNVKR--------------TAVEETRF 243
Query: 299 IFVRLSVLREYLEKELA-MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E A + + +DDWV M F VGNDF+P LP L I A+
Sbjct: 244 FLLHLGLLREYLELEFAELSKSERKLDVAQLIDDWVLMGFLVGNDFIPSLPLLHIHTNAL 303
Query: 358 DRL--------------------VNLYKKTVY-----KTQEQLRQEENGGGGGRGVKRSF 392
L +NL + ++ + + Q+ E++ K
Sbjct: 304 SLLYKTYIRVYPQLGGNINEQGRLNLQRLAIFMNALSEVEMQIFDEQSDKLHYANSKNEA 363
Query: 393 DDVDESSEEEESNDEVRLWEDG-------------------------FKDRYYESKFDVP 427
DVD D L ++ FK YY +KF
Sbjct: 364 FDVDVEDLRNRDKDLTALIDNSMKLYEDDSDEDLSDEGAALNGEFQNFKRNYYRNKFKNE 423
Query: 428 KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
D +GH YV L WVL YYY+G +SW WY+P+HYAPF SD +I V NF+ G
Sbjct: 424 MHD-GLIAELGHHYVTALQWVLDYYYRGVQSWDWYYPYHYAPFISDITDIPSVKINFQMG 482
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S + DFYP++F+ DLNGK W+ V L+PF+D+ RL A++ +L+ EE
Sbjct: 516 STLADFYPKEFETDLNGKMHEWEAVVLIPFIDQRRLLDAMSECDSQLTTEE 566
>gi|66514180|ref|XP_393481.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Apis mellifera]
Length = 1633
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 212/568 (37%), Positives = 287/568 (50%), Gaps = 144/568 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR+++ +YP C+ +K + +IP EFDNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYINERYP-----CLTEK---LKDYQIP-----------EFDNLYLDLNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D E+ + IF I LF +++P+KL ++AIDGVAPRAK+NQQRSRR
Sbjct: 42 ECSHPDDTDITFRISEEIIFKNIFRYIQVLFCMIQPQKLFFIAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
F+A+K+ A+I+E K A G LP EK FDSNCITPGT FM++L L Y
Sbjct: 102 FKAAKD--------AQIQEAKARAKGINLPKEK----RFDSNCITPGTLFMSKLDEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+ KVILS + VPGEGEHKIMDYIR +AQP++D NT+HCL G DADL
Sbjct: 150 FITYKISTDKLWQKCKVILSGSQVPGEGEHKIMDYIRHMKAQPNYDVNTKHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
IMLGL THE +FT++REE F Q + C PE E
Sbjct: 210 IMLGLCTHEIHFTLLREELTFGKKQRKVCLT-------------------PE-------E 243
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPH------- 346
+F LS+LREY+ E + LPF Y E+ +DDW+ M F +GNDF+PH
Sbjct: 244 TKFCLFHLSLLREYINHEFSSLKEKLPFSYDLEKIIDDWILMGFLIGNDFIPHLPNLHII 303
Query: 347 --------------LPSLE--IREGAVDRL-------VNLYKKTVYKTQE---QLRQEEN 380
+P+L+ I E RL L + + + E L+ E+
Sbjct: 304 HGALSVLYQVYIDVMPTLDGYINEAGTLRLDRFEKFMERLSRFDILQFSEYYADLKYLES 363
Query: 381 GGGGGRGVKRSFDDVDESSEEEESNDEVRLW-------------------------EDGF 415
G RS + ++ +E++ SN+E+R EDG
Sbjct: 364 KTG------RSLIETEKLNEKKSSNEEIRSPKKVQDKEFDMLLRTAAEMSLGRYDDEDGG 417
Query: 416 KDR----------------YYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
D+ YY +K D F YV + W L YYY GC SW
Sbjct: 418 DDKSDSEMYTMEFVQCKKDYYINKLKYENIDEDFLRSQAEGYVRAIQWNLNYYYNGCCSW 477
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P HYAP+ SD + ++ FE G
Sbjct: 478 SWYYPHHYAPYISDIKDFKDLKLEFELG 505
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII++YP +F+ DLNGK+ W+ V L+PF++E+ L A+AP+Y KLS+EE
Sbjct: 537 EQSPIINYYPSEFETDLNGKEQEWEAVVLIPFINEKDLLDAMAPHYSKLSLEE 589
>gi|452822189|gb|EME29211.1| 5'-3' exoribonuclease [Galdieria sulphuraria]
Length = 571
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 198/499 (39%), Positives = 274/499 (54%), Gaps = 70/499 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+RWLS ++P + QE+ + EFDN YLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERFPVI--------NQELETE-------------YEFDNFYLDMNGIIH 39
Query: 61 PCTHPED--KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + + + +EM +IFE DRL+RIV+P+KLL++A+DGVAPRAKMNQQRSRR
Sbjct: 40 LCTHNNNSLQLVWNNVEEMFDSIFEYTDRLYRIVKPKKLLFLAVDGVAPRAKMNQQRSRR 99
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++K+ EK LA+ E + S FDSNCITPGT FM LS +
Sbjct: 100 FRSAKDA-----------EKALAEAIERGEEIKSSSRFDSNCITPGTEFMHVLSQRFKDW 148
Query: 179 IHDRLNNDPGW-KGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
I +DP W +G +I S +VPGEGEHKIMD+IR + +HCL G DADL
Sbjct: 149 ISFMTTHDPAWQQGCDIIFSGPDVPGEGEHKIMDFIRTHTEDKEWT-ERKHCLYGLDADL 207
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL TH P+F+++RE++ + D E N E
Sbjct: 208 IMLGLVTHFPHFSLLREKYVIQKK-------------------DGEANKPKFFF----EE 244
Query: 298 FIFVRLSVLRE--YLE-KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F F++L++LR+ YLE K L F Y ER +DD+VFMC FVGNDFLP+LP L+I
Sbjct: 245 FHFLQLALLRDMLYLEFKPFGDTELSFAYDLERVVDDFVFMCIFVGNDFLPNLPHLDINT 304
Query: 355 GAVDRLVNLYKKTV-----YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR 409
GA++ + +YK + Y T+ + + V ++ + EE +E
Sbjct: 305 GALNVMFAVYKSLLPQMGGYLTERHRIHPKRTEWFLQQVAKAERAYFQYRAVEE--NEPG 362
Query: 410 LWEDGFKDRYYESKFDVPKDDIAFRLM-VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYA 468
D +K YY+SK + ++ ++ + +Y GL ++L+YYYQGC SWKW++P YA
Sbjct: 363 FLGDEYKSYYYQSKLGIRMEEEPHKVRELCQKYYEGLHFILQYYYQGCPSWKWFYPSFYA 422
Query: 469 PFASDFINIAEVDTNFETG 487
P ASD + + E+ FE G
Sbjct: 423 PLASDMVQLEEIRVEFEQG 441
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 33/41 (80%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
SP+ ++YP DF++DLNGK+ +W+ + L+PF+DE RL ALA
Sbjct: 475 SPLNEYYPPDFEVDLNGKRNSWEAIVLIPFIDENRLLNALA 515
>gi|430814593|emb|CCJ28201.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1318
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 168/374 (44%), Positives = 233/374 (62%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+S +YP Q + +++P EFDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWISERYPMC--------SQLITEKRVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CTH ++ E+E +AIF+ I+ LF ++P+KL ++++DGVAPRAKMNQQRSRRF+
Sbjct: 42 NCTHMDENKKEIPENEAFLAIFKYIEHLFGTIKPKKLFFLSVDGVAPRAKMNQQRSRRFK 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE E + ++ ++ G +P + FDSNCITPGT FM RLS L Y+I+
Sbjct: 102 AAKEAYE-------LYQEKISKGEDVPKDP-----FDSNCITPGTLFMKRLSEQLKYFIN 149
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ D WKGI++I S VPGEGEHKIM+YIR +AQPD++PN +HCL G DADLIML
Sbjct: 150 RKVSEDTNWKGIEIIFSGHEVPGEGEHKIMEYIRLSKAQPDYEPNLRHCLYGLDADLIML 209
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GL +H+P+F ++REE + G + + +E E F
Sbjct: 210 GLLSHDPHFCLLREEV---------LFGSVKKKKQEL----------------EEQNFYL 244
Query: 301 VRLSVLREYLEKELA-MPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+ L +LREYLE E + N+P FPY+FE+ +DD++ + FFVGNDFLPHLP L I EGA+
Sbjct: 245 MHLCLLREYLEMEFQELTNIPNFPYNFEKIIDDFILLAFFVGNDFLPHLPKLHINEGALA 304
Query: 359 RLVNLYKKTVYKTQ 372
+ +YKK + K +
Sbjct: 305 LVFKIYKKVIPKAR 318
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
E+++S+ E ++E+ + KD YY K +D + Y+ GL WVL YYY+G
Sbjct: 459 EKDDSHKEDAIFEEKWIKWKDSYYIEKLGFSINDTKKLKEMAENYIEGLQWVLFYYYRGV 518
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW W++ +HY+P SD + +F GT
Sbjct: 519 SSWSWFYKYHYSPKVSDIKKGFAANLSFTLGT 550
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 645 MAAQSTKAPSFIP---GGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
MA ++ +P + SPI DFYPEDF++D+N KK +W+ +A +PF++EE L
Sbjct: 559 MAVLPERSKKLVPKPFADLMVNETSPIRDFYPEDFELDMNDKKASWEAIAKIPFINEELL 618
Query: 702 HKALAPYYEKLSVEE 716
+ L+ EE
Sbjct: 619 LSVIKAKEHLLTDEE 633
>gi|387592987|gb|EIJ88011.1| hypothetical protein NEQG_01455 [Nematocida parisii ERTm3]
Length = 613
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 266/501 (53%), Gaps = 94/501 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRW++++YP + +N +G E DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYP-----------KSINAA-----------SGQEVDNLYLDLNGIIH 38
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP ++ P E+EM IF+ +D L IVRP+ LLY+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
K ++DG + E G FD N ITPGTPFM RL + YI
Sbjct: 99 P----------------KDVSDGHV-----EGG--FDPNTITPGTPFMYRLHCAIIRYIE 135
Query: 181 DRLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R + GWK + VI S +VPGEGEHK+ D++R + +H +CG DADLI
Sbjct: 136 QRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKGT-----GVRHAICGLDADLIF 190
Query: 240 LGLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
L LATHE +F ++RE+ + + C +C + GH C PN TF
Sbjct: 191 LSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNC-----NPN-----TFPP-- 238
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+I++ + ++R YL + + + + FER LDDW+F+CFFVGNDFLP +PS++I+ A
Sbjct: 239 -YIYLDIDIIRRYLYTDFSTA-INARFDFERILDDWIFVCFFVGNDFLPSIPSMDIKVAA 296
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEE--------------- 401
++ + Y + ++ L ++ V D + E+ E+
Sbjct: 297 IETITTSYINNLLTRRQYLTEDSKINIAELSV--LMDTLGETEEKLLRAKLAGYVKNAKR 354
Query: 402 -----EESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
E + +V+L+E+ + YY SK +DI + EY+ GL W+L+YYY+G
Sbjct: 355 RGEAPREEDLKVKLYEEKGRLEYYSSKMHANSPEDITNGCV---EYLRGLSWILQYYYKG 411
Query: 456 CRSWKWYFPFHYAPFASDFIN 476
C SW WY+P H+AP A D +
Sbjct: 412 CPSWNWYYPLHFAPLAQDIAD 432
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 633 NKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
+K R+ + MA + S IP G + P + + + YP++ KID+ GK AWQGVAL
Sbjct: 445 SKGAARKPLEQVMAVLPPSSASSIPEGLY-PIFNEMPENYPDEVKIDMFGKTQAWQGVAL 503
Query: 693 LPFVDEERLHKALAPYYEKLSVEE 716
LPF D ++L + + L ++E
Sbjct: 504 LPFFDCDKLVSLVREHSRNLPLDE 527
>gi|218190750|gb|EEC73177.1| hypothetical protein OsI_07223 [Oryza sativa Indica Group]
Length = 790
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 204/527 (38%), Positives = 278/527 (52%), Gaps = 123/527 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F+RWL +YPS++ P S+P + +DNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVS---------------PAKESRPADGIVVYDNLYLDMNQIIH 45
Query: 61 PCTHPEDK-------PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN- 112
HP+D+ AP E+ ++F+ +DRLFRIVRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
+R RRF + E E + +I E + D N ITPGT FM ++S
Sbjct: 106 MRRGRRFAWASEEEE----MQKISEGV----------------SDPNVITPGTEFMEKIS 145
Query: 173 ACLHYYIHDRLNN-DPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
L YYI RLN+ DPGWK I VILSDANVPGEGEHKIM +IR QR+ +DPNT+HCL
Sbjct: 146 QALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLF 205
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIML LA+HE +F+I+RE+ ++ E A+P
Sbjct: 206 GHDADLIMLALASHEVHFSILRED---------------NSQLTE-----ADP------- 238
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
E +++F+ + VLREYLE EL + + ER +DD++F+CF +GNDF+PH+PSLE
Sbjct: 239 ---EKQYLFLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLE 295
Query: 352 IREGAVDRLVNLYKKTVYKTQ--------------------------EQLRQEENGGGGG 385
++E A+D L+ +YK T K QL E
Sbjct: 296 MKEYALDLLIEVYKTTFNKMGGYIVNIEKVKDKHAAYLEVSRLEIFFHQLSMYEEKIFLK 355
Query: 386 R------GVKRSFDDVDESSEEEESNDEVRLWEDGF--KDRYYESKFDVPKDDIAFRLMV 437
R +K+S DV + E E + R ED F ++R Y+
Sbjct: 356 RYELEQESLKKSCRDVLREASESERLELSRKLEDLFFNEERPYDK--------------- 400
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
+Y+ GLCW+L+YY SW WY+PF+ APF SD + + +F
Sbjct: 401 AQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISF 447
>gi|387596301|gb|EIJ93923.1| hypothetical protein NEPG_01495 [Nematocida parisii ERTm1]
Length = 613
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/503 (37%), Positives = 269/503 (53%), Gaps = 102/503 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRW++++YP + +N +G E DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYP-----------KSINAA-----------SGQEVDNLYLDLNGIIH 38
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP ++ P E+EM IF+ +D L IVRP+ LLY+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRNREPPGSEEEMFREIFKTVDHLVSIVRPKHLLYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
K ++DG + E G FD N ITPGTPFM RL + YI
Sbjct: 99 P----------------KDVSDGHV-----EGG--FDPNTITPGTPFMYRLHCAIIRYIE 135
Query: 181 DRLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R + GWK + VI S +VPGEGEHK+ D++R + +H +CG DADLI
Sbjct: 136 QRQSAGINGWKQLAVIYSGCDVPGEGEHKVYDFVRSIKGT-----GVRHAICGLDADLIF 190
Query: 240 LGLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
L LATHE +F ++RE+ + + C +C + GH C PN TF
Sbjct: 191 LSLATHEKSFKVLREDVFFLEKEERSTCKLCKKEGHSTGNC-----NPN-----TFPP-- 238
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+I++ + ++R YL + + + + FER LDDW+F+CFFVGNDFLP +PS++I+ A
Sbjct: 239 -YIYLDIDIIRRYLYTDFSTA-INARFDFERILDDWIFVCFFVGNDFLPSIPSMDIKVAA 296
Query: 357 VDRLV-----NLYKK--------------------TVYKTQEQLRQEENGGGGGRGVKRS 391
++ + NL + T+ +T+E+L + + G +R
Sbjct: 297 IETITTSCINNLLTRRQYLTEDSKINIAELSVLMDTLGETEEKLLRAKLAGYVKNAKRRG 356
Query: 392 FDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
E+ EE+ +V+L+E+ + YY SK + + V EY+ GL W+L+Y
Sbjct: 357 -----EAPREEDL--KVKLYEEKGRLEYYSSKIHANSPEDITNVCV--EYLRGLSWILQY 407
Query: 452 YYQGCRSWKWYFPFHYAPFASDF 474
YY+GC SW WY+P H+AP A D
Sbjct: 408 YYKGCPSWNWYYPLHFAPLAQDI 430
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 633 NKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
+K R+ + MA + S IP G + P + + + YP++ KID+ GK AWQGVAL
Sbjct: 445 SKGAARKPLEQVMAVLPPSSASSIPEGLY-PIFNEMPENYPDEVKIDMFGKTQAWQGVAL 503
Query: 693 LPFVDEERLHKALAPYYEKLSVEE 716
LPF D ++L + + L ++E
Sbjct: 504 LPFFDCDKLVSLVREHSRNLPLDE 527
>gi|58267550|ref|XP_570931.1| Exonuclease II [Cryptococcus neoformans var. neoformans JEC21]
gi|57227165|gb|AAW43624.1| Exonuclease II, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1457
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 226/371 (60%), Gaps = 61/371 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+S +YP Q + IP FDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWISERYPLT--------SQLITPNSIP-----------TFDNLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
C+HP E+ P + E++M++AIF ID LF ++P+K+ +MAIDGVAPRAKMNQQRS
Sbjct: 42 NCSHPPSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRS 101
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRA K+ ++ REK +G LP EK FDSN ITPGTPFMARLS L
Sbjct: 102 RRFRAGKDARDQ-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHLK 150
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
YY+ R++ D W+ I+VILS +VPGEGEHKI ++IR +AQPD++PNT+HCL G DAD
Sbjct: 151 YYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDAD 210
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LIMLGL +H+P+F ++REE G + N E T
Sbjct: 211 LIMLGLLSHDPHFCLLREEV--------------------TFGRKSRQNTELANT----- 245
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS++REYL+ E + + F Y ER +DD++ M FVGNDFLPHLP L I E
Sbjct: 246 NFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHINE 305
Query: 355 GAVDRLVNLYK 365
GA++R+ +YK
Sbjct: 306 GALERIWGMYK 316
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 384 GGRGVKRSFDD------VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRL 435
G V+R F + VD E+ E + + +L E D K +YY K ++ +D A
Sbjct: 483 GKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHDKLEINYNDPAQMQ 542
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ H Y+ GL W+L YYY+G SW W++ +HY+P +D +A++ F+ G
Sbjct: 543 DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEFDYG 594
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPIIDFYP +F++D+NGKK W+ V +PF+D+ RL KA+A +L+ EE E
Sbjct: 626 ETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERE 680
>gi|134112225|ref|XP_775088.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257740|gb|EAL20441.1| hypothetical protein CNBE3620 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1473
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/372 (47%), Positives = 226/372 (60%), Gaps = 63/372 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGM-EFDNLYLDMNGII 59
MG+P FFRW+S +YP S PN + FDNLYLDMNGII
Sbjct: 1 MGIPKFFRWISERYP--------------------LTSQLITPNSIPTFDNLYLDMNGII 40
Query: 60 HPCTHP---EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
H C+HP E+ P + E++M++AIF ID LF ++P+K+ +MAIDGVAPRAKMNQQR
Sbjct: 41 HNCSHPPSTENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQR 100
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFRA K+ ++ REK +G LP EK FDSN ITPGTPFMARLS L
Sbjct: 101 SRRFRAGKDARDQ-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHL 149
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YY+ R++ D W+ I+VILS +VPGEGEHKI ++IR +AQPD++PNT+HCL G DA
Sbjct: 150 KYYVRKRISEDADWRSIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDA 209
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIMLGL +H+P+F ++REE G + N E T
Sbjct: 210 DLIMLGLLSHDPHFCLLREEV--------------------TFGRKSRQNTELANT---- 245
Query: 296 VEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + LS++REYL+ E + + F Y ER +DD++ M FVGNDFLPHLP L I
Sbjct: 246 -NFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHIN 304
Query: 354 EGAVDRLVNLYK 365
EGA++R+ +YK
Sbjct: 305 EGALERIWGMYK 316
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 8/112 (7%)
Query: 384 GGRGVKRSFDD------VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRL 435
G V+R F + VD E+ E + + +L E D K +YY K ++ +D A
Sbjct: 483 GKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHDKLEINYNDPAQMQ 542
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ H Y+ GL W+L YYY+G SW W++ +HY+P +D +A++ F+ G
Sbjct: 543 DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEFDYG 594
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPIIDFYP +F++D+NGKK W+ V +PF+D+ RL KA+A +L+ EE E
Sbjct: 626 ETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERE 680
>gi|321259283|ref|XP_003194362.1| 5'-3' exonuclease involved in mRNA decay; Kem1p [Cryptococcus
gattii WM276]
gi|317460833|gb|ADV22575.1| 5'-3' exonuclease involved in mRNA decay, putative; Kem1p
[Cryptococcus gattii WM276]
Length = 1456
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 175/371 (47%), Positives = 226/371 (60%), Gaps = 61/371 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+S +YP Q + IP FDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWISERYPLT--------SQLITPNSIP-----------TFDNLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
C+HP E+ P + E++M++AIF ID LF ++P+K+ +MAIDGVAPRAKMNQQRS
Sbjct: 42 NCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRS 101
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRA K+ ++ REK +G LP EK FDSN ITPGTPFMARLS L
Sbjct: 102 RRFRAGKDARDQ-------REKAEKNGEKLPDEKA----FDSNAITPGTPFMARLSQHLK 150
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
YY+ R++ D W+ I+VILS +VPGEGEHKI ++IR +AQPD++PNT+HCL G DAD
Sbjct: 151 YYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRHCLYGLDAD 210
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LIMLGL +H+P+F ++REE G + N E T
Sbjct: 211 LIMLGLLSHDPHFCLLREEV--------------------TFGRKSRQNTELANT----- 245
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS++REYL+ E + + F Y ER +DD++ M FVGNDFLPHLP L I E
Sbjct: 246 NFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPDLHINE 305
Query: 355 GAVDRLVNLYK 365
GA++R+ +YK
Sbjct: 306 GALERIWGMYK 316
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 384 GGRGVKRSFDD------VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRL 435
G V+R F + VD E+ E + + +L E DG K +YY K ++ +D A
Sbjct: 483 GKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDGIKRQYYHDKLEINYNDPAQMQ 542
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ H Y+ GL W+L YYY+G SW W++ +HY+P +D +A++ F+ G
Sbjct: 543 DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEFDYG 594
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPIIDFYP +F++D+NGKK W+ V +PF+D+ RL KA+A +L+ EE E
Sbjct: 626 ETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTPEERE 680
>gi|340959829|gb|EGS21010.1| 5'-3' exoribonuclease 1-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1461
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/387 (46%), Positives = 234/387 (60%), Gaps = 62/387 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D E+EM +AIF I+ LF ++P+KL +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDVDDVHFRLTEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + R REK L +G LP E+ FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTA-------LDAERAREKALREGKELPKEEP----FDSNCITPGTEFMAKLSLQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G +++LS VPGEGEHKIM+YIR RAQPD++PNT+HCL G DADLI
Sbjct: 151 INKKVSEDRDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q H+ KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQAKHKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL P +PFP+ ER +DD++ M FFVGNDFLP+LP L I E
Sbjct: 247 YLLHLCIVREYLELEFQELKEPGAIPFPFDMERVIDDFILMAFFVGNDFLPNLPRLHINE 306
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENG 381
GA+ + +YKK + K + ENG
Sbjct: 307 GALALMFKIYKKVLPKCDGYI--NENG 331
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 395 VDESSEEEESNDEVRLWE--DGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLK 450
+D SSEE ++ + + + +KD+YY SK D P++ + YV GL WVL
Sbjct: 482 LDLSSEEAKAAVQEKYKQKFQEWKDKYYLSKMDGWTPQNLEQELKKMAENYVQGLQWVLY 541
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFIL 501
YYY+G SW W++ +HYAP SD + D NF+ G QP N L +L
Sbjct: 542 YYYRGIASWPWFYGYHYAPMISDVVKGLGADLNFKLG-QPFRPNEQLMGVL 591
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F++DLNGKK W+ V +PF+DE+RL +A+AP L+ EE
Sbjct: 611 NSPIIDFYPREFELDLNGKKMDWEAVVKIPFIDEKRLLEAMAPRNALLTEEE 662
>gi|327267071|ref|XP_003218326.1| PREDICTED: 5'-3' exoribonuclease 1-like [Anolis carolinensis]
Length = 1744
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ Q V +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLS---QVVKEHQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ V LS PGEGEHKIM++IR ++ +PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL +HEP+F+++REE + + VC PE E F
Sbjct: 211 ILGLTSHEPHFSLLREEVRFGGKKSQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + FPY E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSPVKTKIKFPYEIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPMLYRTY 314
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 42/55 (76%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+DSPIID+YP +FK DLNGK+ W+ V L+PF+DE++L +A+ P + L+ EE +
Sbjct: 539 EDSPIIDYYPTEFKTDLNGKQQEWEAVVLIPFIDEKQLLEAMEPCNKLLTTEERQ 593
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 378 EENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
E+ GG G +K + +D E E +D +K YY +K V F
Sbjct: 404 EKPDGGNGVILKTTLED------EPEEDDLFETEFRQYKRAYYMTKMGVEVVSDDFLADQ 457
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
YV + W+L YYY G +SW WY+P+HYAP+ SD I ++
Sbjct: 458 AKCYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDIRKIGDL 500
>gi|19114394|ref|NP_593482.1| exonuclease II Exo2 [Schizosaccharomyces pombe 972h-]
gi|729456|sp|P40383.1|XRN1_SCHPO RecName: Full=5'-3' exoribonuclease 1; AltName: Full=Exonuclease 2;
AltName: Full=Exonuclease II; Short=Exo II; AltName:
Full=p140
gi|531022|gb|AAB42181.1| deoxyribonuclease [Schizosaccharomyces pombe]
gi|2370486|emb|CAB11514.1| exonuclease II Exo2 [Schizosaccharomyces pombe]
Length = 1328
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/372 (46%), Positives = 227/372 (61%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+S +YP Q + +IP EFDNLYLDMNGI+H
Sbjct: 1 MGIPKFFRWMSERYPLC--------SQLIENDRIP-----------EFDNLYLDMNGILH 41
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D + P E+EM +AIF I+ LF ++P+KLLYMA+DG APRAKMNQQRSRR
Sbjct: 42 NCTHKNDDHSSPPLPEEEMYIAIFNYIEHLFEKIKPKKLLYMAVDGCAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +K+ A AR++ + +G P E+ FDSNCITPGT FM R+S L+Y+
Sbjct: 102 FRTAKD-----AHDARLKAE--RNGEDFPEEQ-----FDSNCITPGTTFMERVSRQLYYF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH ++ ND W+ I+VI S + PGEGEHKIM+YIR Q+AQP ++PNT+HCL G DADLI
Sbjct: 150 IHKKVTNDSQWQNIEVIFSGHDCPGEGEHKIMEYIRTQKAQPSYNPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE A + ++ H+ +F
Sbjct: 210 MLGLLSHDPHFCLLREEVTFGPASR-NRSKELAHQ-----------------------KF 245
Query: 299 IFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYLE E F Y E+ LDD++ + FFVGNDFLPHLP L I EGA
Sbjct: 246 YLLHLSLLREYLEFEFQECRSTFTFKYDLEKILDDFILLAFFVGNDFLPHLPGLHINEGA 305
Query: 357 VDRLVNLYKKTV 368
+ + ++YKK +
Sbjct: 306 LALMFSIYKKVM 317
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 401 EEESNDEVRLWED--GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRS 458
EE++ E + +D +KD YY SK D + YV GL WVL YYY+GC+S
Sbjct: 480 EEQALKEKNVEKDFIQWKDDYYRSKVGFSYYDEEALKAMAERYVEGLQWVLFYYYRGCQS 539
Query: 459 WKWYFPFHYAPFASDFINIAEVDTNFETGT 488
W WY+ +H+AP SD + +V +F+ GT
Sbjct: 540 WGWYYNYHFAPKISDVLKGLDVKIDFKMGT 569
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPE+F +D NGK +W+ V ++PF+DE RL ALA + L+ EE
Sbjct: 601 ESPIIDFYPENFALDQNGKTASWEAVVIIPFIDETRLIDALASKDKFLTEEE 652
>gi|357471609|ref|XP_003606089.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507144|gb|AES88286.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 866
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 233/379 (61%), Gaps = 52/379 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPN--GMEFDNLYLDMNGI 58
MGVP+F+RWL KYP F+ PN N +E+DNLYLDMN I
Sbjct: 1 MGVPSFYRWLLNKYPKA------------------FEDINPNTNTTNVEYDNLYLDMNSI 42
Query: 59 IHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
IHPC HP D P E+ +FE IDRL I +PRKLLYMAIDGVAPRAKMNQ
Sbjct: 43 IHPCFHPNDDDNNNGTPPTTFVEVFANMFEYIDRLVTIAKPRKLLYMAIDGVAPRAKMNQ 102
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR K+ + E R+R++ +G + P K++ DSN ITPGT FM ++S
Sbjct: 103 QRTRRFRNVKDDEMREVEEERLRKEFEMEGKQVLP-KQECEVSDSNIITPGTDFMHQISN 161
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L YI ++++DP WKGI VILSDANVPGEGEHK+M +IRKQR PD+DPNT HCL G+
Sbjct: 162 ALKSYISSKISSDPLWKGIMVILSDANVPGEGEHKVMSFIRKQRGLPDYDPNTVHCLYGS 221
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DADLIMLGL+ HEP+F+I+RE V LD P+ +
Sbjct: 222 DADLIMLGLSCHEPHFSILRE-----------------------VILDP-PDRYEKLPPN 257
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLP--FPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ + F + + +LREYLE E+ + + P F + ER +DD++F+CFF GNDFLPHLPSL
Sbjct: 258 APMRFKLLHIWLLREYLEIEMKIEDPPKNFVFDLERIVDDFIFICFFSGNDFLPHLPSLY 317
Query: 352 IREGAVDRLVNLYKKTVYK 370
I E A+D L+ +YKK K
Sbjct: 318 IHEDAIDLLMTVYKKEFSK 336
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 406 DEVRLWEDGFKDRYYESKFDVP-KDDIAF-RLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D+++L GFK+RYY+ KF V +I R + +Y GL WVL+YY+ G SW W++
Sbjct: 468 DKIKLGNVGFKERYYKEKFSVEGSTNIELKRKEIVQKYTEGLLWVLQYYFSGVASWTWFY 527
Query: 464 PFHYAPFASDFINIAEVDTNFETGT 488
P+HY PF SD +A+V NFE G
Sbjct: 528 PYHYGPFVSDLKGMAQVRVNFEKGV 552
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ S I D Y +DF+ID+ GK+F WQGV LP++DE+RL +LS E++
Sbjct: 583 EQSKIFDLYSQDFEIDIEGKRFMWQGVCKLPYMDEKRLLTETRELKNELSESEAK 637
>gi|167539832|ref|XP_001741374.1| 5'-3' exoribonuclease [Entamoeba dispar SAW760]
gi|165894075|gb|EDR22159.1| 5'-3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 779
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/372 (46%), Positives = 227/372 (61%), Gaps = 43/372 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FF WL++KY + C E + D S PNPNG+E+DN Y+D+NG+IH
Sbjct: 1 MGVPSFFAWLTKKYFGITNDCKRGSSIEND------DLSSPNPNGVEYDNFYIDLNGLIH 54
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP D+ P+ ++ V + + ID + IVRPRKLLY+AIDGVAPRAKMNQQRSRRF+
Sbjct: 55 PCYHPTDRQTPETNVDVFVLLTQYIDYMIDIVRPRKLLYIAIDGVAPRAKMNQQRSRRFK 114
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHF-----DSNCITPGTPFMARLSACL 175
+ + E EK S F DSNCITPGT FM +S +
Sbjct: 115 TAYNMENQSFE-------------------EKKSIFKEKPVDSNCITPGTEFMEAVSKVI 155
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
YI +R+N+ W I VI SD++VPGEGEHKI+D+IR+Q+ +++P +HC+ G DA
Sbjct: 156 KAYIKERMNSSKYWNSIIVIFSDSSVPGEGEHKIIDFIRRQKDCKNYNPYIRHCMYGLDA 215
Query: 236 DLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
DLIML LATHE F+IIR+ KP N+ C +CG H C + P IT
Sbjct: 216 DLIMLALATHERYFSIIRD--KPYNKGDKCYICGDY-HSPDHCKNYN-RIAPLDPIT--- 268
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
FIFV VLR+YL K + + Y FER LDD++F CF VGNDFLP +PSL+I+E
Sbjct: 269 -KPFIFVDCHVLRQYLNKTIKVEK----YDFERCLDDFIFFCFLVGNDFLPRIPSLDIQE 323
Query: 355 GAVDRLVNLYKK 366
GA+D L+ +Y K
Sbjct: 324 GAIDILIKIYLK 335
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
EE NDE++L E G+++RYY+ KF V K + + + + YV GL WV YYY+GC+SW
Sbjct: 447 EELKNDEIQLGEPGYEERYYQQKFHVEYKKEKSLVIEIIESYVEGLNWVFSYYYEGCQSW 506
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFET 486
WY+P++YAPFA D + +D FE
Sbjct: 507 DWYYPYYYAPFAKDIGKL--LDPEFEV 531
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 33/42 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
SP+ +FYPE+FKID+NG++ ++ +AL+ F+++++L + P
Sbjct: 570 SPLSNFYPEEFKIDMNGERSFYKAIALIGFINQKKLLSVVEP 611
>gi|66359900|ref|XP_627128.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
gi|46228551|gb|EAK89421.1| Rat1 Kar1/Rat1 like 5'-3' exonuclease [Cryptosporidium parvum Iowa
II]
Length = 1350
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/428 (42%), Positives = 242/428 (56%), Gaps = 54/428 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWL +YP +IV ++D E D ++PN NG EFD LYLDMNGIIH
Sbjct: 1 MGVPTFYRWLCNRYP-LIVKELKDAVDEETCLN-DLDLTEPNING-EFDCLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P PKDE EM + + IDRL+ +V+PR+L+YMAIDGVAPRAKMNQQRSRR++
Sbjct: 58 PCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRYK 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ E +E+ G P EK +DSN ITPGTPFM RL+ CLH YI
Sbjct: 118 TALEMDYNRRAYEIAQEEFSKIGYKCPEYVEK---WDSNVITPGTPFMERLTMCLHAYIR 174
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+ D W+ I VI SD+N+PGEGEHKI+++IR QR+ D++PNT+H L G+DADLIML
Sbjct: 175 RKFETDESWRSISVIFSDSNIPGEGEHKILEFIRNQRSNEDYNPNTRHVLYGSDADLIML 234
Query: 241 GLATHEPNFTIIRE---EFKPNQARPCDVCGQM------GHEMKECVGLDAEPNPESVI- 290
GL+THE F IIRE +FK + + + G + N +I
Sbjct: 235 GLSTHESYFYIIREAVRDFKVESPSSISILYNTWIEKINNNHLGSSFGDNGTNNSSDIIL 294
Query: 291 --------TFGSEVEFI-------FVRLSVLREYLE----------------------KE 313
FG ++ V LS+LREYL E
Sbjct: 295 NGIFQNGPNFGKKLRIYSWWSDIEIVDLSMLREYLNFDFGEIRDQIGYINNNIGENLVNE 354
Query: 314 LAMPNLP-FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQ 372
M N F Y FER +DD++F+CFF+GNDFLP+LP I +G++D+++ +Y + + +
Sbjct: 355 YGMKNNSDFQYDFERCIDDFIFLCFFIGNDFLPNLPVFSIYKGSLDQILGIYIRVLPRIG 414
Query: 373 EQLRQEEN 380
+ L E N
Sbjct: 415 DYLTLEGN 422
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y+ GL WVL YYY G SW WY+P+HYAP+ D + +
Sbjct: 705 YLRGLSWVLGYYYHGVPSWDWYYPYHYAPYVMDIVEL 741
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSV 714
+D+P+ +FYP FK D NG K W+ VALLPF+D++ L + + P ++ V
Sbjct: 795 KDNPLSEFYPSKFKQDPNGNKQRWKWVALLPFIDQKVLLETVIPLENEMDV 845
>gi|378755557|gb|EHY65583.1| hypothetical protein NERG_01190 [Nematocida sp. 1 ERTm2]
Length = 613
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/513 (37%), Positives = 265/513 (51%), Gaps = 92/513 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRW++++YP I +V Q + DNLYLD+NGIIH
Sbjct: 1 MGVPSLFRWIAKRYPKSI--------NKVANQGV--------------DNLYLDLNGIIH 38
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HP K AP E EM IF +D L IVRP++L+Y+A+DGVAPRAKMNQQR RRFR
Sbjct: 39 PCCHPRGKDAPGSEKEMFQEIFRMVDHLVAIVRPKQLMYIAVDGVAPRAKMNQQRERRFR 98
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
T DG + E G FD N ITPGTPFM RL + YI
Sbjct: 99 PKDPT----------------DGHV-----EGG--FDPNTITPGTPFMYRLHTAITRYIE 135
Query: 181 DRLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R + GWK + VI S +VPGEGEHKI D++R + +H +CG DADLI
Sbjct: 136 QRQSAGVNGWKQLAVIYSGCDVPGEGEHKIYDFVRSIKGS-----GVRHVICGLDADLIF 190
Query: 240 LGLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
L LATHE +F ++RE+ + + C +C + GH C NP +
Sbjct: 191 LSLATHEQSFRVLREDVFFLEREERSSCQLCKKDGHSTGNC-------NPNAF------P 237
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+I++ + ++R YL + + + + FER LDDW+F+CFFVGNDFLP +PS++I+ A
Sbjct: 238 PYIYLDIDIIRRYLYTDFSTA-INARFDFERILDDWIFVCFFVGNDFLPSIPSMDIKVAA 296
Query: 357 VDR-----LVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESS----------EE 401
++ L NL + Y TQ++ E + + D + S
Sbjct: 297 IETITGSYLTNLITRRAYLTQDRKINMEELAVLMKTLGEQEDALLRSKLSCYVKAAKRRG 356
Query: 402 EESNDE---VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRS 458
E DE ++L+E+ ++ YY+ K + + EY+ GL W+L+YYY GC S
Sbjct: 357 ETPRDEDLRIKLFEEKGRNEYYQMKMHASTPEEITNSCI--EYIKGLSWILEYYYNGCPS 414
Query: 459 WKWYFPFHYAPFASD----FINIAEVDTNFETG 487
W+WY+P H+AP A D ++ + FE G
Sbjct: 415 WEWYYPMHFAPLARDIAETLLSHPNISFEFEVG 447
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 636 KKRRERQMKMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPF 695
K R+ + MA + S IP G + P + + YPE KID+ GK AWQGV L+PF
Sbjct: 448 KARKPLEQVMAVLPQSSSSSIPEGLY-PIFKDMPENYPETIKIDMFGKTQAWQGVPLIPF 506
Query: 696 VDEERLHKALAPYYEKLSVEE 716
+D +++ + Y L +E+
Sbjct: 507 LDCDKMVTLVREYSADLPLED 527
>gi|449018780|dbj|BAM82182.1| exonuclease [Cyanidioschyzon merolae strain 10D]
Length = 829
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 208/547 (38%), Positives = 273/547 (49%), Gaps = 112/547 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRWLS +YP + Q + G + EFDN YLDMNGIIH
Sbjct: 1 MGIPRFFRWLSLRYPVIN--------QSLEGDR-------------EFDNFYLDMNGIIH 39
Query: 61 PCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D DE EM IF DRL+RIV+PRK L++A+DGVAPRAKMNQQRSRRF
Sbjct: 40 TCTHNNDGDIIFLDEVEMFARIFAYTDRLYRIVKPRKFLFLAVDGVAPRAKMNQQRSRRF 99
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R++KE +AE I L DG I FDSNCITPGT FM RLS +I
Sbjct: 100 RSAKEAERVLAEA--IARGDLEDGFI-------EERFDSNCITPGTAFMDRLSQAFREWI 150
Query: 180 HDRLNNDPGWK-GIKVILSDANVPGEGEHKIMDYIRKQRAQPDH--DPNTQHCLCGADAD 236
++ ND W+ G KV+ S VPGEGEHKIM+ IR+ + Q H D +HC+ G DAD
Sbjct: 151 DYKMRNDRAWQTGCKVVFSGPEVPGEGEHKIMEMIREIKRQHRHRGDMPIRHCMYGLDAD 210
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVG---LDAEPNPESVITFG 293
LIMLGL THEP F ++RE+ G++G + + + NP + G
Sbjct: 211 LIMLGLVTHEPYFALLREKLV--------YRGRIGERLGAAARSPPITSLSNPAAASESG 262
Query: 294 SEV------------------------EFIFVRLSVLREYLEKELA-------MPNLPFP 322
EF + +++LR+ L KE A PF
Sbjct: 263 DNSPLARALAARRMGLVDAPANLDDFEEFHLLEINLLRDELYKEFAELASRQRSDAPPFH 322
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-----YKTQE---- 373
ER +DD++FM VGNDFLPHLP L+I +GA++ L YK+ + Y T +
Sbjct: 323 VDLERIVDDFMFMGVLVGNDFLPHLPHLDISDGALELLFGAYKELLPIMGGYLTDKHRIH 382
Query: 374 ---------QLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF 424
+L +EE RGV +++ E + E ++ YY KF
Sbjct: 383 PDRLEAFAARLAEEERAYFNRRGVD---ENIQEYCDPER-----------YRVAYYRDKF 428
Query: 425 ----DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV 480
D P + R V Y+ GL WVL+YY+ GC SW WY+P+++AP SD ++
Sbjct: 429 RLNLDAPDGNERLRGQVIQSYLEGLHWVLQYYHHGCPSWTWYYPYYFAPLCSDLRDLGSY 488
Query: 481 DTNFETG 487
F G
Sbjct: 489 KVRFLKG 495
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 3/54 (5%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA---PYYEKLSVE 715
+SP+ DFYP +F+ DLNGK+F W+ V LLPF++E RL +A+ P+ E S E
Sbjct: 528 ESPVRDFYPAEFRTDLNGKRFDWEAVVLLPFIEERRLLEAVGSIDPHRELTSEE 581
>gi|449531061|ref|XP_004172506.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 254
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/255 (65%), Positives = 191/255 (74%), Gaps = 2/255 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP-QEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVPAF+RWL+ +YP I VE++P +G P D SKPNPNGMEFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPRSIADVVEEEPVGGPSGVLFPIDVSKPNPNGMEFDNLYLDMNGII 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC HPE KP P D + +IF+ ID LF +VRPRK+LYMAIDGVAPRAKMNQQRSRRF
Sbjct: 61 HPCFHPEGKPPPATYDAVFKSIFDYIDHLFSLVRPRKVLYMAIDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AE AE R+R++ A+G L P KEK DSN ITPGT FM LS L YY
Sbjct: 121 RAAKDAAEAEAEEERLRKEFEAEGQTLLP-KEKPETCDSNVITPGTEFMGVLSVALQYYA 179
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RLN++PGW+ KVILSD+NVPGEGEHKIM YIR QR P DPNT+HCL G DADLIM
Sbjct: 180 QSRLNHNPGWRFTKVILSDSNVPGEGEHKIMQYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
Query: 240 LGLATHEPNFTIIRE 254
L LATHE +F+I+RE
Sbjct: 240 LSLATHEVHFSILRE 254
>gi|342182115|emb|CCC91594.1| putative exoribonuclease 1 [Trypanosoma congolense IL3000]
Length = 1296
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 199/520 (38%), Positives = 284/520 (54%), Gaps = 82/520 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ +YP VI PF P DNLYLD+NGIIH
Sbjct: 1 MGVPKFFRWIAERYPMVIT---------------PFRDFPP-----PVDNLYLDVNGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
C+HP D + E EM+ A+F +++LF ++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCSHPNDANSSAKVLTEKEMIEAMFVYLEKLFHAIQPRKCFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E + RE+ A+G L E + FDSNCITPGT FM +S L Y
Sbjct: 101 RYRSGYE-------MMVARERAAAEGMELLEE----NVFDSNCITPGTEFMVNVSEHLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I ++++DP W+ KV+ S + PGEGEHKI+DYIR+++ Q D++PN H L G DADL
Sbjct: 150 FIMMKVSSDPAWQSCKVVYSGHDHPGEGEHKIVDYIRRRKMQEDYNPNETHSLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
I+L LATHEP+ ++RE F P+Q D + E E G+ A+ T+
Sbjct: 210 ILLALATHEPHLVLLREVVSFGPSQGSRAD---REQRENDEANGIVADK------TYNKP 260
Query: 296 VEFIFVRLSVLREYLEKELAM---PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
EF+ +++LR YL+ E+ LP Y E +DD+VFMC F+GNDFLP +P+L I
Sbjct: 261 DEFVLFHVNILRNYLDLEVRYVLGGKLPAGYDLEHVIDDFVFMCIFIGNDFLPSIPTLGI 320
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGV--------KRSFDDVDESSEEEES 404
R+G+V ++V +Y + K +L E+G V K + + +E +
Sbjct: 321 RDGSVVKMVEIYATKIVKNGRRL--TEDGSINWDAVDTWLQELAKDELPTIKSRALQERA 378
Query: 405 NDEVRLWEDG-----------------FKDRYYESKFDV-----PKDDIAFRLMVGHEYV 442
+G +K++YY K P+ + +L + YV
Sbjct: 379 YQSRMARMNGGYEAPNISTETVETLVEYKEKYYREKHGFGDGWNPQGENMAKLKL--HYV 436
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
G+ WVL+YYYQG SWKW++P HYAP ASD +++A V +
Sbjct: 437 EGIAWVLEYYYQGPPSWKWFYPHHYAPMASDLVDLAAVAS 476
Score = 45.8 bits (107), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SP+ ++PE +ID G + W+GV L+PF+DE L A K++ E+
Sbjct: 515 KGSPLAKYFPEKLQIDREGARAEWEGVVLIPFIDERVLLAAYESVQSKVTPED 567
>gi|194762996|ref|XP_001963620.1| GF20490 [Drosophila ananassae]
gi|190629279|gb|EDV44696.1| GF20490 [Drosophila ananassae]
Length = 1605
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 272/545 (49%), Gaps = 118/545 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P++L ++A+DGVAPRAKMNQQ
Sbjct: 42 NCSHPDDSNIHFHLEEAQIFQDIFNYVDKLFYLIKPQRLFFLAVDGVAPRAKMNQQ---- 97
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
E ++ K L G E+ + FDSNCITPGT FM RL L +
Sbjct: 98 ---RSRRFRSSREAEQMESKALQRG-----ERREHERFDSNCITPGTEFMQRLQVRLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR +AQPD DPNT+HCL G DADLI
Sbjct: 150 LQTKISTDPLWQRCSVILSGQETPGEGEHKIMDYIRFMKAQPDFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKELAMPNL-PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E N + +DDWV M F VGNDF+PHLP L I A+
Sbjct: 244 FLLHLGLLREYLELEFDDLNTDEHKLDVAQLIDDWVLMGFMVGNDFIPHLPCLHISSNAL 303
Query: 358 DRL--------------------VNLYKKTVYKTQ------EQLRQEENGGGGGRGVKRS 391
L +NL + V+ T EQ ++ + +
Sbjct: 304 PLLYSTYIKIYPKLGGNINENGKLNLQRLQVFLTALTEVELEQFKEHADDLKYMNAKTEA 363
Query: 392 FD-DVDESSEEEESNDEV--------RLWE------------------DGFKDRYYESKF 424
FD DV E + E + ++ +L+E +K YY +KF
Sbjct: 364 FDVDVSEITGTESYDSDLAALIDNSMKLYEGDSDEDLCDEAASLMHEFQNYKRNYYCTKF 423
Query: 425 DVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDT 482
K D +L+ + + YV L W+L YYY+G +SW WY+PFHYAPF SD N+ +V
Sbjct: 424 ---KSDSPDQLIEELSYHYVTALQWILDYYYRGVQSWDWYYPFHYAPFISDIRNVEKVKV 480
Query: 483 NFETG 487
NF G
Sbjct: 481 NFHLG 485
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SP+ +F+P DF+ DLNGKK W+ V L+PF+DE+RL A+ P +LS E E
Sbjct: 518 ESPLAEFFPVDFESDLNGKKHDWEAVVLIPFIDEKRLLNAMVPCELRLSEAEKE 571
>gi|147866227|emb|CAN79939.1| hypothetical protein VITISV_027778 [Vitis vinifera]
Length = 918
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 206/569 (36%), Positives = 288/569 (50%), Gaps = 131/569 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL KYP ++V VED+ + SS NPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDERE----------SSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC HPED+ P +E+ ++E IDR+F I
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIE--------------------------- 83
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
AE R+R + + L P++E D N ITPGT FM +S L YI
Sbjct: 84 ----------AEEQRLRRQYEMEXKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYI 132
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R+ ++ GWK +KVILSD+NVPGEGEHKIM + R QR+ PD++PNT HCL G DADLIM
Sbjct: 133 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFXRLQRSLPDYNPNTLHCLYGLDADLIM 192
Query: 240 LGLATHEPNFTIIREEFKPNQAR-PCDVCGQMGHE--------------MKECVGLDAE- 283
L LATHE +F+I+RE+ + R C+ + K+ + +D
Sbjct: 193 LALATHEVHFSILREDVLTLEQRGSCESAVETKTSPPKANSSLVKSRGWFKQVLTVDKTN 252
Query: 284 ---PNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPY---SFERALDDWVFMCF 337
N ES + ++ + F+ + +LREYLE ++ + + P +FER +DD++F+CF
Sbjct: 253 SFIKNLESKSSI--KMPYQFLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCF 310
Query: 338 FVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-----YKTQEQLRQEENG------GGGGR 386
F+GNDFLPH+P+LEI EGA+D L+ +YKK Y + EE+ G R
Sbjct: 311 FLGNDFLPHMPTLEIHEGAIDLLMTVYKKEFKNIGGYMVDMERNNEEDQSCNLEIGSTNR 370
Query: 387 GV---------KRSFDDVDESSEEE-------------------ESNDEVR----LWED- 413
G S +++ SS E + +R LW
Sbjct: 371 GCTSPSGKARSSSSVENLGTSSGTEYLITDKSELXTFYTKEMKKRLKENIRAKSDLWRSG 430
Query: 414 ------------GFKDRYYESK--FDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSW 459
G+K+RYY+ K D + + R + +Y GL WVL+YY+ G SW
Sbjct: 431 SLGIDRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSW 490
Query: 460 KWYFPFHYAPFASDFINIAEVDTNFETGT 488
W++P+HY PFASDF ++ V E G+
Sbjct: 491 TWFYPYHYGPFASDFKGLSRVKAKXEKGS 519
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+DS IIDFY +F++D +GK+F WQG+ LPF+DE RL
Sbjct: 550 EDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARL 587
>gi|359479538|ref|XP_002272207.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1072
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 169/344 (49%), Positives = 221/344 (64%), Gaps = 32/344 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+F+RWL KYP ++V VED+ + SS NPNG+EFDNLYLDMNGIIH
Sbjct: 1 MGVPSFYRWLVNKYPEIVVRAVEDERE----------SSSANPNGIEFDNLYLDMNGIIH 50
Query: 61 PCTHPEDKPAPKDE-DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PC HPED+ P +E+ ++E IDR+F IVRPRKLLYMAIDGVAPRAKMNQQR RRF
Sbjct: 51 PCFHPEDQIFPPTTFEEVFNNMYEYIDRIFSIVRPRKLLYMAIDGVAPRAKMNQQRRRRF 110
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ +K+ AE R+R + +G L P++E D N ITPGT FM +S L YI
Sbjct: 111 QTAKDNEIAEAEEQRLRRQFEMEGKPLVPKQESQVS-DPNIITPGTVFMHEVSKALQQYI 169
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
R+ ++ GWK +KVILSD+NVPGEGEHKIM +IR QR+ PD++PNT HCL G DADLIM
Sbjct: 170 CSRMKHEAGWKDLKVILSDSNVPGEGEHKIMSFIRLQRSLPDYNPNTLHCLYGLDADLIM 229
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
L LATHE +F+I+RE+ + R E E+ + +
Sbjct: 230 LALATHEVHFSILREDVLTLEQRG-----------------SCESAVETKTSPPKANSSL 272
Query: 300 FVRLSVLREYLEKELAMPNLPFPY---SFERALDDWVFMCFFVG 340
F+ + +LREYLE ++ + + P +FER +DD++F+CFF+G
Sbjct: 273 FLHVWILREYLELDMKISDPPEKLKEINFERIVDDFIFLCFFLG 316
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 406 DEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYF 463
D VRL G+K+RYY+ K D + + R + +Y GL WVL+YY+ G SW W++
Sbjct: 589 DRVRLGHPGWKERYYKEKCSCDTSQGIESTRKELVQKYTEGLLWVLQYYFSGVPSWTWFY 648
Query: 464 PFHYAPFASDFINIAEVDTNFETGT 488
P+HY PFASDF ++ V FE G+
Sbjct: 649 PYHYGPFASDFKGLSRVKGKFERGS 673
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 30/38 (78%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+DS IIDFY +F++D +GK+F WQG+ LPF+DE RL
Sbjct: 704 EDSNIIDFYNTNFEVDTDGKRFIWQGICKLPFIDEARL 741
>gi|407925965|gb|EKG18938.1| Putative 5-3 exonuclease [Macrophomina phaseolina MS6]
Length = 1429
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 233/388 (60%), Gaps = 80/388 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENR--------IP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDSDSPTHRMSEDKMFIAIFNYIEHLFGKIKPQKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +++ E REK + +G +P E FDSNCITPGT FMARL+ L Y+
Sbjct: 102 FRTARDAEEA-------REKAIREGVEMPAE----PAFDSNCITPGTEFMARLTQHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ ++QP +DPN +HCL G DADLI
Sbjct: 151 INKKVSEDVDWQGVEIVLSGHEVPGEGEHKIMEYIRQAKSQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL P L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLMHLCIVREYLELEFQELEQPGALDFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYKTQ 372
P+LP L I EGA+ + +YKK + K +
Sbjct: 297 PNLPHLHINEGALALMFGVYKKVLPKAK 324
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+ +KD YY+SK + +D + YV GL WVL YYY+G SW WY+ +HYAP S
Sbjct: 508 NSWKDNYYKSKLEWGLNDKEELRKMTENYVQGLQWVLFYYYRGVASWPWYYGYHYAPMIS 567
Query: 473 DFINIAEVDTNFETGTQP 490
D + D NF+ G QP
Sbjct: 568 DVKEGLKADLNFKLG-QP 584
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 639 RERQMKMAAQSTKAPSFIPGGQ---FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPF 695
R Q M ++ S +P ++SPIIDFYP DF++D+NGKK W+ V +PF
Sbjct: 586 RPYQQLMGVLPDRSKSIVPAAYHELMTQKESPIIDFYPRDFELDMNGKKMDWEAVVKIPF 645
Query: 696 VDEERLHKALA 706
+DE+RL A+A
Sbjct: 646 IDEKRLLPAMA 656
>gi|393910764|gb|EJD76029.1| CBR-XRN-2 protein [Loa loa]
Length = 764
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 167/209 (79%), Gaps = 1/209 (0%)
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
MARL+ L YY+H RLN+DPGW+ + VILSDANVPGEGEHKIMD+IR+QRA P HDPNT
Sbjct: 1 MARLAVALRYYVHQRLNSDPGWEKVAVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTV 60
Query: 228 HCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
HCLCGADADLIMLGLATHEPNF IIREEF PNQ RPCD+CGQ GH++ +C GL + + E
Sbjct: 61 HCLCGADADLIMLGLATHEPNFNIIREEFMPNQQRPCDLCGQYGHDLNDCKGLALDDDSE 120
Query: 288 SVIT-FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
+ E FIFVRL VLREYLE+EL +PN P+ ERA+DDWVFMCFFVGNDFLPH
Sbjct: 121 CQSSPLQKETNFIFVRLPVLREYLERELHIPNSSIPFDLERAIDDWVFMCFFVGNDFLPH 180
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQL 375
LPSLEIRE A+DRLV LYK VY+ + L
Sbjct: 181 LPSLEIRENAIDRLVKLYKDMVYEMKGHL 209
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 70/95 (73%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
D+SS E+E DEVRLWEDG+KDRYY+SKF V DI FR V YV GLCWVL YYYQG
Sbjct: 324 DDSSSEDEVFDEVRLWEDGWKDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQG 383
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
C SW WY+PFHYAPFASDF +++ +F T+P
Sbjct: 384 CASWDWYYPFHYAPFASDFDAVSQFKPDFSACTEP 418
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP++F IDLNGKK AWQGVALLPFVDE+RL + L P +KL E E
Sbjct: 450 SPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKE 502
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
KL+ M+ G LTDSG V +ER Q+I+ LG +EDEIFK RQ+ E F
Sbjct: 196 KLYKDMVYEMKGHLTDSGVVHIERAQIILNKLGEVEDEIFKSRQEREQQF 245
>gi|21755602|dbj|BAC04718.1| unnamed protein product [Homo sapiens]
Length = 473
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRTSDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
>gi|348531416|ref|XP_003453205.1| PREDICTED: 5'-3' exoribonuclease 1 [Oreochromis niloticus]
Length = 1692
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/372 (45%), Positives = 224/372 (60%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDN YLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNFYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D+ E+++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K L G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKALDKGEVLPTE----ARFDSNCITPGTEFMARLQEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+H++L+ND W+ +KV LS PGEGEHKIM++IR + +P+HDPNT+HCL G DADLI
Sbjct: 151 VHNKLSNDKLWQNVKVYLSGHETPGEGEHKIMEFIRSENTKPNHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HEPNF+++REE K +Q R IT
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKR---------------------------ITAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E + + Y ER +DDW+ M F VGNDF+PHLP+L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSELKNKMGSDYDLERVIDDWILMGFLVGNDFIPHLPNLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 NHDALPLLYKTY 315
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV G+ W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 433 YKRTYYMNKIGVDVVSDEFLANQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 492
Query: 475 INIAEVDTNFETG 487
N++ + FE G
Sbjct: 493 RNVSGLKLTFELG 505
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII +YP DFK DLNGK+ W+ V L+PF+DE L A+ P KL+ EE
Sbjct: 537 ESSPIIGYYPLDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPCNSKLTKEE 589
>gi|224060082|ref|XP_002195477.1| PREDICTED: 5'-3' exoribonuclease 1 [Taeniopygia guttata]
Length = 1699
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 220/368 (59%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP +I Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYPCLI--------QVLKEHQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFANIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL+ L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLNEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+GI V LS PGEGEHKIM++IR ++A+P HDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F ++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFALLREEVRFGGKKAQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYRTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V AF YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 433 YKRTYYMTKMGVEVVSDAFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 492
Query: 475 INIAEVDTNFETG 487
NI+E+ FE G
Sbjct: 493 HNISELKIKFELG 505
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
QDSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ + L EE
Sbjct: 537 QDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKGLKEEE 589
>gi|289577074|ref|NP_957327.2| 5'-3' exoribonuclease 1 [Danio rerio]
Length = 1697
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 170/372 (45%), Positives = 223/372 (59%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D+ E+++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K L G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKALEKGEVLPTE----ARFDSNCITPGTDFMARLQEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+H++L+ D W+G+ V LS PGEGEHKIM++IR + +P H+PNT+HCL G DADLI
Sbjct: 151 VHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HEP+F+++REE K +Q R IT
Sbjct: 211 MLGLTSHEPHFSLLREEVRFGGKKSQKR---------------------------ITAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E + + F Y ER +DDWV M F VGNDF+PHLP L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 NHDALPLLYRTY 315
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVL 443
GV+ S + EE ++ ++E F K YY +K V F YV
Sbjct: 404 GVRDSHSTAGRAEGAEEDGEDDDMFETEFRQYKRTYYMTKMGVEVVSDEFLANQAKCYVE 463
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
G+ W+L YYY G +SW WY+P+HYAPF SD NI+ + F+
Sbjct: 464 GIQWILHYYYHGVQSWSWYYPYHYAPFLSDVRNISGLSLTFD 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI+++YP+DFK DLNGK+ W+ V L+PF+DE+ L A+ PY L+ E
Sbjct: 540 SSPIVEYYPQDFKTDLNGKQQEWEAVVLIPFIDEKCLLAAMEPYTHNLTPSE 591
>gi|160331478|ref|XP_001712446.1| dhm [Hemiselmis andersenii]
gi|159765894|gb|ABW98121.1| dhm [Hemiselmis andersenii]
Length = 553
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/483 (39%), Positives = 256/483 (53%), Gaps = 60/483 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + VE+ EFD YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLINQRLVENS---------------------EFDCFYLDMNGIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+ E K + E+E+ IF D LFRIVRPRKL+Y+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 NCSQKEQKDNIQTEEELFQKIFSYTDHLFRIVRPRKLIYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ KE EKI V KL K + S FDSNCITPGT FM LS ++
Sbjct: 100 SVKE-LEKIKTVVNETSKL---------SKNEISFFDSNCITPGTEFMKNLSFSFKKWLE 149
Query: 181 DRLNNDPGW-KGIKVILSDANVPGEGEHKIMDYIRK-QRAQPDHDPNTQHCLCGADADLI 238
+++ DP W +G VI S + VPGEGEHKIM+YIRK Q+ + +HCL G DADLI
Sbjct: 150 NKIKFDPEWQQGCDVIFSGSEVPGEGEHKIMNYIRKIQKFNQNKSKTLRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL HE FT++RE+ + +K L + P + EF
Sbjct: 210 MLGLVAHENQFTLLREKL---------IWKGTQQNIKPIDSLKKKNQP-------AGDEF 253
Query: 299 IFVRLSVLREYLEKELA-MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ +S+LR+ L E + F ++ ER +DD++FMC +GNDFLP LP L I G +
Sbjct: 254 HLLEISLLRDMLYLEFKPKESWRFTFNIERIVDDFIFMCMLIGNDFLPSLPHLSIASGGL 313
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDG--- 414
+ LV YK+ ++ L ++ G V+ + + +EE + W
Sbjct: 314 NLLVRSYKEIQKDSKGYLTKKYQMHMG--RVELFLEKISNEAEEFFFCQNEKNWGGNGST 371
Query: 415 --FKDRYYESKFDV---PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
+K+ YY SK ++ D + +Y+ GL W L YY++GC SW W++P +YAP
Sbjct: 372 LDYKESYYSSKLNLDYSSGKDKKRLEKLKSDYIQGLNWCLYYYHKGCPSWNWFYPEYYAP 431
Query: 470 FAS 472
S
Sbjct: 432 LTS 434
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 651 KAPSFIP---GGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
K+ F+P +DSPI++FYP +FK+DLNGKK W+GV LLPF+D+++L +
Sbjct: 465 KSSIFLPLTFANLMTDKDSPILNFYPNNFKLDLNGKKNLWEGVVLLPFIDQKKLIDTVNI 524
Query: 708 YYEKLSVEESE 718
Y K S+ + E
Sbjct: 525 YGRKESLCKEE 535
>gi|71052193|gb|AAH39314.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
>gi|345569898|gb|EGX52724.1| hypothetical protein AOL_s00007g507 [Arthrobotrys oligospora ATCC
24927]
Length = 1409
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/381 (45%), Positives = 232/381 (60%), Gaps = 66/381 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + E++M +AIF I+ LF ++P+K +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKTFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + +K + DG +P E FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTALDNE-------KAYQKAVKDGVEMPKEDP----FDSNCITPGTGFMAKLSEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ ++++D W+G+++ILS VPGEGEHKIM+YIR +AQP ++PN +HCL G DADLI
Sbjct: 151 INKKVSDDAEWQGLEIILSGHEVPGEGEHKIMEYIRLTKAQPGYNPNLRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + NQ + ++ Q
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRNNQKKSKELEHQ-------------------------- 244
Query: 296 VEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
F + LS++REYLE +EL P L PY FER LDD+V + FFVGNDFLPHLP L
Sbjct: 245 -NFYLMHLSIVREYLELEFQELKEPGLLSVPYDFERVLDDFVLLAFFVGNDFLPHLPGLH 303
Query: 352 IREGAVDRLVNLYKKTVYKTQ 372
I EGA+ + +YKK + K +
Sbjct: 304 INEGALSLMFKIYKKVLTKAK 324
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGFK---DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
VD S++E ++ E RL+++ F+ D YY++KF DD + Y+ G+ WVL Y
Sbjct: 484 VDISADEAKAEME-RLYQEKFRAWRDGYYKAKFGFGLDDTEEMRGLAENYIEGIQWVLFY 542
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
YY+G SW W+F +HYAP SD + NF G+
Sbjct: 543 YYRGVASWGWFFRYHYAPKISDVKKGLGANLNFRLGS 579
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
DSPI+DFYP DF++D+NGKK W+ V +PF+ E+RL A+
Sbjct: 611 DSPILDFYPRDFELDMNGKKQDWEAVVKIPFIQEDRLLAAM 651
>gi|403304036|ref|XP_003942619.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1694
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 223/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ +PF Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNVEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|403304034|ref|XP_003942618.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1706
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 223/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ +PF Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKIPFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNVEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|351699398|gb|EHB02317.1| 5'-3' exoribonuclease 1 [Heterocephalus glaber]
Length = 1707
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 223/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNVKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ N+ F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKENITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD V YV + W+L YYY
Sbjct: 414 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAVC--YVQAIQWILHYYY 471
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKEEE 589
>gi|357624452|gb|EHJ75231.1| putative 5-3 exoribonuclease 1 [Danaus plexippus]
Length = 730
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/390 (47%), Positives = 234/390 (60%), Gaps = 60/390 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR+ S +YP C+ + V +IP +FDN+YLDMNGIIH
Sbjct: 1 MGVPKFFRYTSERYP-----CLN---ELVKQYQIP-----------DFDNMYLDMNGIIH 41
Query: 61 PCTHPEDK-PAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D P + E+++ IF I LF+I++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 42 NCSHPDDSNPHFRITEEKIFKDIFHYISILFQIIKPKKLFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AEK+ E A+ + G LP EK FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSARE-AEKLEETAKEK------GEALPTEKR----FDSNCITPGTVFMARLHEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++++ DP W +KVILS PGEGEHKIMDYIR R+QPD+DP+T+HCL G DADLI
Sbjct: 151 IKEKISTDPLWSKVKVILSGHETPGEGEHKIMDYIRWARSQPDYDPSTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ THEP+F ++REE K G + +PE E F
Sbjct: 211 MLGVCTHEPHFALLREEVK------------FGKTTQRAT------SPE-------ETNF 245
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYLE+E NLPFPY E +DDWV M F VGNDF+P+LP++ I A
Sbjct: 246 YLLHLSLLREYLEQEFISIKDNLPFPYDIENIIDDWVLMGFLVGNDFIPNLPNMHISNDA 305
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENGGGGGR 386
+ L Y TV T + E GR
Sbjct: 306 LPLLYKTY-MTVLPTLDGYINESGDLNLGR 334
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 393 DDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVL 449
DD+ + EE++DE E F K YY +K D K YV + W L
Sbjct: 413 DDMKSDEDYEETSDEEANMEMEFILHKKDYYMNKLDYSKVTDEVLSDQAECYVRAIQWNL 472
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YYY+GC SW WY+P HYAP+ SD + ++ FE G
Sbjct: 473 WYYYRGCPSWCWYYPHHYAPYISDIKDFGNMNMEFELG 510
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPI+ +YP F+ DLNGKK W+ V LLPF+DE L A++P Y++L+ EE
Sbjct: 542 EDSPIVHYYPVSFETDLNGKKNDWEAVVLLPFIDETNLLSAMSPCYQRLTEEE 594
>gi|328850703|gb|EGF99864.1| hypothetical protein MELLADRAFT_68240 [Melampsora larici-populina
98AG31]
Length = 406
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/286 (55%), Positives = 198/286 (69%), Gaps = 12/286 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP--QEVNG--QKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVPA FRWLS+KYP ++ +ED P EV G ++ P D SK NPNG+EFD MN
Sbjct: 1 MGVPALFRWLSKKYPKIVEQVIEDVPIRTEVEGGYEETPLDMSKRNPNGVEFD-----MN 55
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
GI+HPCTHPE K P+ E+EMM+ +F+ +R+ +VRPRKLL +AIDGVAPRAKMNQQRS
Sbjct: 56 GIVHPCTHPEGKKPPETEEEMMIEVFKYTERVVNMVRPRKLLMIAIDGVAPRAKMNQQRS 115
Query: 117 RRFRASKETAEKI-AEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RRFRA++E K A++A I E + K +DSN ITPGTPFM L+ L
Sbjct: 116 RRFRAAQEAQTKEEAKLAAIEEWKTMGKELSEEFKSDKKAWDSNAITPGTPFMTLLTESL 175
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I ++N DPGWK I+VILSDA+VPGEGEHKIMD+IR+QR +DPNT H + G DA
Sbjct: 176 RYWIVHKMNTDPGWKQIQVILSDASVPGEGEHKIMDFIRRQRTHSSYDPNTSHVIYGLDA 235
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQ--ARPCDVCGQMGHEMKECVG 279
DLIML LATHEP+F ++RE+ +Q R C CGQ GH +C G
Sbjct: 236 DLIMLSLATHEPHFKVLREDVFADQKKGRGCYTCGQPGHHSSQCQG 281
>gi|328709686|ref|XP_003244039.1| PREDICTED: 5'-3' exoribonuclease 1-like [Acyrthosiphon pisum]
Length = 509
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 175/382 (45%), Positives = 233/382 (60%), Gaps = 60/382 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + V +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYP-----CLSEL---VKDYQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHP-EDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP +D P + +E +V IF ++ LF++++P+KL +MAIDGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDDDPHFRITEETIVKNIFHYLEVLFQMIQPQKLFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ AE+ E ++ G LP E+ FDSNCITPGTPFM RL + L Y+
Sbjct: 102 FRSAHTAAEQTKEA-------ISRGETLPSEER----FDSNCITPGTPFMVRLQSELEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ D+++NDP W ++VILS VPGEGEHKIMDYIR +++P ++P+T+HCL G DADLI
Sbjct: 151 VADKMSNDPLWTKVQVILSGHQVPGEGEHKIMDYIRYMKSRPGYNPHTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THEP F+++REE K G + K+ +D E +F
Sbjct: 211 MLGLCTHEPYFSLLREEVK------------FGRKTKKETSVD-------------ETQF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++R+YL E LPF Y E +DDWV M F VGNDF+PHLP L I +GA
Sbjct: 246 YLLHLSLMRDYLGLEFQELKETLPFEYDLESIIDDWVLMGFLVGNDFIPHLPDLHISKGA 305
Query: 357 VDRLVNLYKKTVYKTQEQ-LRQ 377
+ L +Y + K + LRQ
Sbjct: 306 LPILYRVYMDVLPKVEGNFLRQ 327
>gi|303277183|ref|XP_003057885.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460542|gb|EEH57836.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 398
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 182/238 (76%), Gaps = 1/238 (0%)
Query: 29 VNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRL 88
++G P D S PNPNG EFDNLYLDMNGIIHPC HPED+PAP E+E+ IF+ IDRL
Sbjct: 1 MDGNTCPVDCSAPNPNGQEFDNLYLDMNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRL 60
Query: 89 FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPP 148
F ++RPRKLLYMAIDGVAPRAKMNQQRSRRFRA++E EK E ++RE L A+G + P
Sbjct: 61 FAMIRPRKLLYMAIDGVAPRAKMNQQRSRRFRAAQEAQEKEEEEEKLRETLRAEGVKV-P 119
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
+K K FDSN ITPGTPFM RLSA L YY+H RLN DPGW+G+KVI+SDA+VPGEGEHK
Sbjct: 120 DKVKSEAFDSNVITPGTPFMGRLSAALQYYVHQRLNTDPGWRGVKVIMSDASVPGEGEHK 179
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDV 266
M YIR+QR DPNT+H + G DADLIML LATHEPNF I+RE A P DV
Sbjct: 180 AMHYIRQQRGLNGFDPNTRHVVYGLDADLIMLALATHEPNFHILREVVFQKNAPPPDV 237
>gi|29126940|gb|AAH48104.1| XRN1 protein [Homo sapiens]
Length = 459
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMA+L L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMAKLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
>gi|157119783|ref|XP_001659504.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108875157|gb|EAT39382.1| AAEL008814-PA [Aedes aegypti]
Length = 1668
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 203/554 (36%), Positives = 279/554 (50%), Gaps = 122/554 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E ++P +FDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSELIRE---NQVP-----------DFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+++ IF ++ LFR++RP+KL ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDSDVFFRITEEKIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E E+ E + G +LP E + FDSNCITPGT FM RL L ++
Sbjct: 102 FRSAREAQEQAEEAQK-------KGEVLPTE----ARFDSNCITPGTSFMVRLQKALEHF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ +P WK KVILS PGEGEHKIM+YIR ++QPD D NT+HCL G DADL+
Sbjct: 151 IKVKVSTNPLWKHCKVILSGHETPGEGEHKIMEYIRYAKSQPDFDSNTRHCLYGLDADLV 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THE +F+++REE K G K+ + E F
Sbjct: 211 MLGLCTHEKHFSLLREEVK------------FGKNDKKS-------------SIVEETRF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH---------- 346
+ L+++REYLE E A L F ++ + +DDWV M + VGNDF+PH
Sbjct: 246 YLLHLTLMREYLELEFAPVRDKLKFEFNIYKLIDDWVLMGYMVGNDFIPHLPHLHINENA 305
Query: 347 -----------LPSLE--IREGAV----------DRLVNLYKKTVYK--TQEQLRQEENG 381
LP+L+ I EG + +RL + + T Q + +
Sbjct: 306 LPTLFQAYMDILPTLDGYINEGGILNMPRLEVLMNRLARFDRDIFLENYTDLQYFKSKRA 365
Query: 382 GGGGRGVKRSFDDVD-------------ESSEEEESNDEVRLWEDG-------------- 414
DD+ ++SE+ S+DE G
Sbjct: 366 HNDTEAFDVIIDDIKAEAEMDCDLSALIKASEDMFSDDEDDAEPPGDIENDPEFFEKEFT 425
Query: 415 -FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+K YY +K + A R Y+ L W L YYY+G SW WY+P HYAPF SD
Sbjct: 426 AYKRNYYITKLGYQDYNQATRDEQTECYIRALQWTLLYYYRGVPSWAWYYPHHYAPFISD 485
Query: 474 FINIAEVDTNFETG 487
NI+ + NFE G
Sbjct: 486 LQNISSLKLNFEPG 499
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SP++D+YPE+F+ DLNGK+ AW+ V L+PF+DE+RL KA+ P L+ EE +
Sbjct: 532 NSPVVDYYPENFETDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQ 585
>gi|395833059|ref|XP_003789564.1| PREDICTED: 5'-3' exoribonuclease 1 [Otolemur garnettii]
Length = 1666
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 414 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLANQAACYVQAIQWILHYYY 471
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 472 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 505
>gi|47216611|emb|CAG10909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 222/372 (59%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEIVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D+ E+++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K L G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKALDKGEVLPTE----ARFDSNCITPGTDFMARLQEQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+H +L+ D W+ ++V LS PGEGEHKIM++IR + P HDPNT+HCL G DADLI
Sbjct: 151 VHSKLSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENNGPGHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HEPNF+++REE K +Q R IT
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKR---------------------------ITAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E ++ +L Y ER +DDW+ M F +GNDF+PHLP L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERIIDDWILMGFLIGNDFIPHLPHLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 SHDALPLLYKTY 315
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 415 FKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+K YY +K DV DD F + YV G+ W+L YYY G +SW WY+P+HYAPF S
Sbjct: 421 YKRTYYMTKMGVDVVSDD--FLALQARCYVEGIQWILHYYYHGVQSWSWYYPYHYAPFLS 478
Query: 473 DFINIAEVDTNFE 485
D N+AE+ F+
Sbjct: 479 DIKNVAELKLTFD 491
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEER 700
++SPII++YP DFK DLNGK+ W+ V L+PF+DE R
Sbjct: 525 ENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDEVR 561
>gi|89269888|emb|CAJ83489.1| 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 385
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 167/372 (44%), Positives = 222/372 (59%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGEVLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + LS PGEGEHKIM++IR Q+ +PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HE +F+++REE K NQ R +T
Sbjct: 211 MLGLTSHEVHFSLLREEVRFGGKKNQKR---------------------------VTAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 NHDALPLLYRTY 315
>gi|432915339|ref|XP_004079186.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Oryzias latipes]
Length = 1689
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 223/368 (60%), Gaps = 57/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D+ E+++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALDKGEVLPTE----ARFDSNCITPGTDFMARLQEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+H++L+ D W +KV LS PGEGEHKIM++IR + ++P HDPNT+HCL G DADLI
Sbjct: 151 VHNKLSTDKLWHNVKVYLSGHETPGEGEHKIMEFIRSENSKPSHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEP+F+++REE + + + IT E F
Sbjct: 211 MLGLTSHEPHFSLLREEVRXGGKK-----------------------SQKRITAPEETTF 247
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + +L Y ER +DDW+ M F VGNDF+PHLP+L I A
Sbjct: 248 HLLHLSLMREYIDYEFSWLKNHLGSAYDLERIIDDWILMGFLVGNDFIPHLPNLHINHDA 307
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 308 LPMLYKTY 315
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV G+ W+L YYY G +SW WY+P+HYAPF SD
Sbjct: 433 YKRTYYMTKMAVDVVSDEFLAQQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPFLSDI 492
Query: 475 INIAEVDTNFETG 487
NI+++ FE G
Sbjct: 493 RNISDLKLTFELG 505
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++SPII++YP DFK DLNGK+ W+ V L+PF+DE+RL A+ PY KL+ EE +
Sbjct: 537 ENSPIIEYYPVDFKTDLNGKQQEWEAVVLIPFIDEKRLLAAMEPYNHKLTKEEKD 591
>gi|410924239|ref|XP_003975589.1| PREDICTED: 5'-3' exoribonuclease 1-like [Takifugu rubripes]
Length = 1673
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/372 (45%), Positives = 225/372 (60%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEIVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D+ E+++ IF ++ LFRI++P K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDEDVHFRISEEKIFADIFHYVEVLFRIIKPCKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K L G +LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKALDKGEVLPTE----ARFDSNCITPGTDFMARLQEQLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+H++++ D W+ ++V LS PGEGEHKIM++IR + +PDHDPNT+HCL G DADLI
Sbjct: 151 VHNKVSTDKLWQNVRVYLSGHETPGEGEHKIMEFIRSENIKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HEPNF+++REE K +Q R IT
Sbjct: 211 MLGLTSHEPNFSLLREEVRFGGKKSQKR---------------------------ITAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E ++ +L Y FER +DDW+ M F VGNDF+PHLP L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSVLRNHLGSNYDFERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 SHDALPLLYKTY 315
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 415 FKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+K YY +K DV DD F M YV G+ W+L YYY G +SW WY+P+HYAPF S
Sbjct: 426 YKRTYYMTKMGVDVVSDD--FLAMQAKCYVEGIQWILHYYYHGVQSWSWYYPYHYAPFLS 483
Query: 473 DFINIAEVDTNFETG 487
D N+AE+ F+ G
Sbjct: 484 DIKNVAELKLTFDLG 498
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPII++YP DFK DLNGK+ W+ V L+PF+DE L A+ P+ +L+ +E
Sbjct: 530 ENSPIIEYYPHDFKTDLNGKQQEWEAVVLIPFIDERCLLAAMEPWNHQLTKQE 582
>gi|383853936|ref|XP_003702478.1| PREDICTED: 5'-3' exoribonuclease 1-like [Megachile rotundata]
Length = 1665
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 203/561 (36%), Positives = 282/561 (50%), Gaps = 132/561 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+R++S +YP C+ + +E ++P EFDNLYLD+NGIIH
Sbjct: 1 MGIPKFYRYISERYP-----CLNETLKE---HQMP-----------EFDNLYLDVNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+++ IF I+ LFR+++P+KL ++AIDGVAPRAK+NQQR RR
Sbjct: 42 GCSHPNDAEVSFRITEEDIFKNIFRYIELLFRMIQPQKLFFIAIDGVAPRAKINQQRGRR 101
Query: 119 FRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
FRA+K+ A I+E K A+G +P EK FDSN ITPGT FM +++ L Y
Sbjct: 102 FRAAKD--------AEIQEAKARAEGIEIPKEK----RFDSNAITPGTAFMYKVNEHLRY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
++ ++++D W+ KVI S + VPGEGEHKIMDYIR +AQPD+D +T+HCL G DADL
Sbjct: 150 FVTYKISSDKLWQKCKVIFSGSEVPGEGEHKIMDYIRYMKAQPDYDIHTKHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL THE +FT++REE + ++ K+ L E + +
Sbjct: 210 IMLGLCTHELHFTLLREE--------------VTYDKKQTKILTPE-----------KTK 244
Query: 298 FIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPH--------- 346
F +S+LREY+ E + L F Y E+ +DDW+ M F VGNDF+PH
Sbjct: 245 FCLFHISLLREYINHEFSQLREKLSFSYDLEKIIDDWILMGFLVGNDFIPHLPNLHITHG 304
Query: 347 ------------LPSLE-------------------------------------IREGAV 357
LP+LE EG +
Sbjct: 305 ALSILYEVYIDVLPTLEGYINEAGTLKLDRFEKFMERLSSFDILKFSEHYADLKYLEGKM 364
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKR------SFDDVDESSEEE----ESNDE 407
R + +K ++ E E+N KR + D++ +E+E ES+ E
Sbjct: 365 GRPLTETEKVNHRKSES--SEQNSSPKKAQDKRFNAFIKAVDEMSIGTEDELRDDESDSE 422
Query: 408 VRLWE-DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
E K YY +K + D F YV L W L YYY GC SW WY+P H
Sbjct: 423 TYTMEFVQHKRDYYINKLKYEEIDEDFLRSQAEGYVTALQWNLHYYYNGCCSWTWYYPHH 482
Query: 467 YAPFASDFINIAEVDTNFETG 487
YAP+ SD + + FE G
Sbjct: 483 YAPYISDIKDFKNLKLEFELG 503
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPIID+YP DF+ DLNGK W+ V L+PF+D RL A+AP+Y+KL+ EE
Sbjct: 535 EQSPIIDYYPMDFETDLNGKTLEWEAVILIPFIDATRLVDAMAPHYDKLTPEE 587
>gi|340057226|emb|CCC51568.1| putative exoribonuclease 2 [Trypanosoma vivax Y486]
Length = 783
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/562 (34%), Positives = 281/562 (50%), Gaps = 117/562 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNG-MEFDNLYLDMNGII 59
MG+ FF WL R Y C+ED P+ V + ++ G +FDNLYLDMNG++
Sbjct: 1 MGIAGFFLWLRRWYGP----CIEDVPESVVQALLKGEAPPEADMGHWKFDNLYLDMNGLV 56
Query: 60 HPCTHPEDK-PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
HPC H P PK E+EM IF +D +FR+V+PRK L M +DGVAP++KMNQQRSRR
Sbjct: 57 HPCCHDTAPLPEPKSEEEMFDRIFSQLDLVFRVVQPRKCLVMCVDGVAPQSKMNQQRSRR 116
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA++E AE + ++L+ G P K S +D N ITP TPFM RL + ++
Sbjct: 117 FRAAEERAESDQLAMQCADELVEMGLPRPSPK---SRWDHNVITPSTPFMERLGVAVEWF 173
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++N DP W+ + V+ SD++VPGEGEHKIM +IR R+QP ++P T H + G DADLI
Sbjct: 174 IGKKVNEDPAWQKVAVVFSDSHVPGEGEHKIMQFIRGLRSQPGYNPQTSHVIYGMDADLI 233
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
LGL+THE N TI+R + PN F
Sbjct: 234 CLGLSTHEENVTILRNQLSET--------------------FQGTPN-----------TF 262
Query: 299 IFVRLSVLREYLEKELA-MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L R++L+++ + N+ FER +DD+VF+CFFVGNDFLPH+P L I+ +
Sbjct: 263 CYFSLFKYRQFLKRDFKNIANM----DFERVIDDFVFLCFFVGNDFLPHVPLLSIKTKGI 318
Query: 358 DRLVNLY----KKTVYKTQE---------------------QLRQ--------------- 377
+ L++ Y + Y T++ LRQ
Sbjct: 319 ESLLDHYVRDFQNHSYLTEKGEVKFGVLSSFLRHFVVDYLCALRQEYLELRNVTKRARAN 378
Query: 378 -EENGGGGGRGVKRSFDDVDE----SSEEEESNDEVRL--------------------WE 412
E+ G G +K D + E ++E E+ ++L +
Sbjct: 379 VEQRLGKGENELKEVLDSLKEDGSNAAEVSEAAHGIKLSLAKERARFVADRESMGFSYTD 438
Query: 413 DGFKDRYYESKF-----DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
++D YYE KF + + + + + G EY+ G WV++YY GC +W+WY+P+HY
Sbjct: 439 PDYRDAYYEKKFGWSASNRTRFEKQIKRLCG-EYLRGTQWVMRYYTSGCPAWEWYYPYHY 497
Query: 468 APFASDFINI-AEVDTNFETGT 488
AP D V+ E G
Sbjct: 498 APLLEDLAAFNGNVNVKMELGA 519
>gi|51476722|emb|CAH18332.1| hypothetical protein [Homo sapiens]
Length = 1694
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI EK + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------EKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLEYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|308160579|gb|EFO63060.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 900
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/400 (44%), Positives = 236/400 (59%), Gaps = 51/400 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP----QEVNGQKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP+FFRW+ ++Y SVI + +E P ++G +P G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYSSVIDNVIEALPDTYEANIDGGALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPC HPE +P P+ E E+ IF+ IDR+ + RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSVCRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKG------------SHFDSNCITPG 164
RRF A+ E +I + A+ R + G P K+ G + DSN ITPG
Sbjct: 113 RRFMAAYE--RQIKQRAQERRHMNL-GDTEPSLKKLGFEENKAMDTFTENALDSNAITPG 169
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
TPFM+RLS L YY+ +R N W+ + V+ +DA PGEGEHKIM ++R QR+QP +DP
Sbjct: 170 TPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPGYDP 229
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQM--GHEMKECV--- 278
T HC+ G DADLIML L THEPNF I+R+ N R C CG + E +
Sbjct: 230 CTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRCGHLRVSSEYRTGTVDP 289
Query: 279 ---------GLDAEPNPESV---ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFE 326
G+D P S + F S +F+ V S LREYL++E ++ FE
Sbjct: 290 FTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHV--SRLREYLQREFDAADV----VFE 343
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
R++DD+VF+ F VGNDFLPH+ L+IRE AV R++ YK+
Sbjct: 344 RSIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQ 383
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 410 LWEDGFKDRYY------------ESKFDVPKDDIAFRL-MVGHEYVLGLCWVLKYYY-QG 455
L + G+ RYY + + D+ K ++ R+ + + Y+ GL WV +YY+
Sbjct: 496 LEKPGYAQRYYLGIGLMDDFQETDQESDIFKTELRKRIQTMCYHYIDGLIWVFRYYFLPK 555
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNR 495
W WY+P+H++P D + ++ T T Q +NR
Sbjct: 556 VEDWGWYYPYHHSPLLVDLASASQTYT--RTWKQHTMSNR 593
Score = 38.9 bits (89), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 671 FYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
FYP K DL+ K W+GV LLPF++ L A Y +L+ E +
Sbjct: 631 FYPSLIKCDLSEKTALWKGVLLLPFINSSELVSAAQKSYGQLTPLEQQ 678
>gi|334347265|ref|XP_003341907.1| PREDICTED: 5'-3' exoribonuclease 1 [Monodelphis domestica]
Length = 1713
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+KE +KI +K L G ILP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRAAKEAEDKI-------KKALEKGEILPSE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ ++++D W+G+ + LS PGEGEHKIM++IR ++ +PDHDPN +HCL G DADLI
Sbjct: 151 VNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHESHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYRTY 314
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 432 YKRTYYMTKMGVEIVSDDFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 491
Query: 475 INIAEVDTNFETG 487
NI+E+ FE G
Sbjct: 492 RNISELKIQFELG 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ ++ L EE
Sbjct: 536 EESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
>gi|126338146|ref|XP_001364729.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Monodelphis
domestica]
Length = 1700
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FRA+KE +KI +K L G ILP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRAAKEAEDKI-------KKALEKGEILPSE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ ++++D W+G+ + LS PGEGEHKIM++IR ++ +PDHDPN +HCL G DADLI
Sbjct: 151 VNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDPNIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHESHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYRTY 314
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 432 YKRTYYMTKMGVEIVSDDFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 491
Query: 475 INIAEVDTNFETG 487
NI+E+ FE G
Sbjct: 492 RNISELKIQFELG 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ ++ L EE
Sbjct: 536 EESPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCHKYLREEE 588
>gi|345789293|ref|XP_534294.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Canis lupus
familiaris]
Length = 1692
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHETHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 369 YKTQEQLRQEENG------GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRY 419
YK +++ + +EN G V S D++++ +E+++ L+E F K Y
Sbjct: 384 YKEKKKSKGQENAICWAALDKNGEEVVTSKDNLEDETEDDD------LFETEFRQYKRTY 437
Query: 420 YESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y +K DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI
Sbjct: 438 YMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNI 495
Query: 478 AEVDTNFETG 487
+ + +FE G
Sbjct: 496 STLKIHFELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEE 589
>gi|363737031|ref|XP_422596.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Gallus gallus]
Length = 1736
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/368 (45%), Positives = 219/368 (59%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLS---QVLKEHQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G ILP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGEILPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+GI V LS PGEGEHKIM++IR ++A+P HDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGITVYLSGHETPGEGEHKIMEFIRSEKAKPHHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THE +F ++REE + + C PE E F
Sbjct: 211 MLGLTTHEAHFALLREEVRFGGKKSQRACA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSPVKDKISFDYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYRTY 314
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K + F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 432 YKRTYYMTKMGIEVVSDDFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 491
Query: 475 INIAEVDTNFETG 487
NI+E+ FE G
Sbjct: 492 RNISELKIQFELG 504
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
QDSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ + L EE
Sbjct: 536 QDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNKCLKEEE 588
>gi|73990326|ref|XP_852437.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Canis lupus
familiaris]
Length = 1705
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHETHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSELKAKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 369 YKTQEQLRQEENG------GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRY 419
YK +++ + +EN G V S D++++ +E+++ L+E F K Y
Sbjct: 384 YKEKKKSKGQENAICWAALDKNGEEVVTSKDNLEDETEDDD------LFETEFRQYKRTY 437
Query: 420 YESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y +K DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI
Sbjct: 438 YMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNI 495
Query: 478 AEVDTNFETG 487
+ + +FE G
Sbjct: 496 STLKIHFELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEE 589
>gi|308480687|ref|XP_003102550.1| CRE-XRN-1 protein [Caenorhabditis remanei]
gi|308261282|gb|EFP05235.1| CRE-XRN-1 protein [Caenorhabditis remanei]
Length = 1668
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/372 (45%), Positives = 228/372 (61%), Gaps = 50/372 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP C+ + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-----CLS---EVINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+E+ + IF I+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFINIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++ ++ EK +A+G ILP EK FDSNCITPGT FM RL L +
Sbjct: 102 FMSARTANSQM-------EKAIANGEILPTEK----RFDSNCITPGTYFMTRLHNKLDEW 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I + +D W+G K+ILS NVPGEGEHKIMD+IR +RA+ +DPNT+HC+ G DADLI
Sbjct: 151 IKKKSASDSHWQGRKIILSGHNVPGEGEHKIMDFIRTERAKSGYDPNTRHCMYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F+++REE N +RP + + N + T F
Sbjct: 211 MLGIVSHEPHFSLLREEVTFN-SRPRK---------------NEQKNKKPKRTDSDVKTF 254
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYL E A +LPF Y ER +DDW+ M VGNDFLPHLPS+ I + A
Sbjct: 255 HLLHLSLLREYLAWEFADVKESLPFAYDMERIVDDWIMMGLLVGNDFLPHLPSIHIHDDA 314
Query: 357 VDRLVNLYKKTV 368
+ L + YKK +
Sbjct: 315 LPLLYSTYKKVL 326
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV + W L YYY GC SW W++P HYAPF SD A + FE +QP
Sbjct: 518 YVRAIQWNLHYYYHGCVSWSWFYPHHYAPFISDVRGFANMKIEFEL-SQP 566
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
P S I DFYP +F+ DLNGK+ W+ V L+PF++E+RL +A+ +LS EE+
Sbjct: 597 PTKSMIHDFYPANFETDLNGKRNDWEAVVLIPFIEEKRLLEAIESKRNRLSREEN 651
>gi|55726904|emb|CAH90211.1| hypothetical protein [Pongo abelii]
Length = 402
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F ++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFPLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
>gi|212535156|ref|XP_002147734.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
gi|210070133|gb|EEA24223.1| exonuclease Kem1, putative [Talaromyces marneffei ATCC 18224]
Length = 1419
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/376 (45%), Positives = 227/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YPS+ Q + +IP EFDNLY DMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSI--------SQLIAENRIP-----------EFDNLYFDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHSDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ + AEVA+ EK +A G +P E FDSNCITPGT FMARL+ L Y+
Sbjct: 102 FRSALD-----AEVAK--EKAIAQGIEMPKEDA----FDSNCITPGTEFMARLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP +DPN +HCL G DADLI
Sbjct: 151 ISKKISEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P F ++REE G A+ + + F
Sbjct: 211 MLGLLSHDPYFCLLREEV--------------------TFGRQAQKKSKEL----EHQNF 246
Query: 299 IFVRLSVLREYLEKELAMPNLP----FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE E L F Y ER +DD++ M FFVGNDFLP+LP + I E
Sbjct: 247 YLLHLCIVREYLELEFQELQLTTKSGFVYDMERIIDDFILMAFFVGNDFLPNLPHMHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + YK+ + K
Sbjct: 307 GALALMFTKYKEALPK 322
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + EE + +E F K++YY KF +D A + YV GL WVL Y
Sbjct: 493 VHEQTAEEAQMAAEQKYEQKFQEWKNKYYMEKFGHGLEDEAAMTKLTENYVQGLQWVLFY 552
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW WYF +HYAP SD + +F+ G QP
Sbjct: 553 YYRGVVSWPWYFQYHYAPMISDVKKGLGANIDFKLG-QP 590
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF+DE RL A+A L+ EE
Sbjct: 621 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEARLLPAMATREHLLTPEE 672
>gi|159115185|ref|XP_001707816.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157435923|gb|EDO80142.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 902
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/401 (44%), Positives = 235/401 (58%), Gaps = 51/401 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKP----QEVNGQKIPFDSSKPNPNGMEFDNLYLDMN 56
MGVP+FFRW+ ++Y SVI + +E P ++G +P G DNLY D N
Sbjct: 1 MGVPSFFRWIVQRYGSVIDNVIEALPDTYEANIDGGALPL--------GFAIDNLYFDTN 52
Query: 57 GIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
G+IHPC HPE +P P+ E E+ IF+ IDR+ I RPR+LLY+A+DG APRAK+NQQRS
Sbjct: 53 GLIHPCFHPEGRPQPETEAEVFEEIFQVIDRVVSICRPRRLLYLAVDGPAPRAKLNQQRS 112
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-------------FDSNCITP 163
RRF A+ E +I + A+ R + + P +K S DSN ITP
Sbjct: 113 RRFMAAYE--RQIKQRAQERRLMNMNLGDAEPSLKKLSFEEGNAMDTSTENVLDSNAITP 170
Query: 164 GTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHD 223
GTPFM+RLS L YY+ +R N W+ + V+ +DA PGEGEHKIM ++R QR+QP +D
Sbjct: 171 GTPFMSRLSVALKYYVANRQANSKLWRHLTVLYADAWSPGEGEHKIMSFVRIQRSQPGYD 230
Query: 224 PNTQHCLCGADADLIMLGLATHEPNFTIIREEFKP-NQARPCDVCGQM--GHEMKECV-- 278
P T HC+ G DADLIML L THEPNF I+R+ N R C CG + E +
Sbjct: 231 PCTVHCIYGLDADLIMLALGTHEPNFLILRDVVDTDNLKRTCTRCGHLRVSSEYRTGTVD 290
Query: 279 ----------GLDAEPNPESV---ITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSF 325
G+D P S + F S +F+ V S LREYL++E ++ F
Sbjct: 291 PFTTRHEDQGGIDCPFYPGSSLRPVAFRSPFQFLHV--SRLREYLQREFDAADV----IF 344
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
ERA+DD+VF+ F VGNDFLPH+ L+IRE AV R++ YK+
Sbjct: 345 ERAIDDFVFLTFLVGNDFLPHIQCLDIREDAVIRMIYFYKQ 385
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 439 HEYVLGLCWVLKYYY-QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNR 495
+ Y+ GL WV +YY+ W WY+P+H++P +D + ++ T T Q +NR
Sbjct: 540 YHYIDGLIWVFRYYFLPKVEDWGWYYPYHHSPLLADLASASQTYT--RTWKQHTVSNR 595
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 671 FYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
FYP K DL+ K W+GV LLPF++ L A Y++L+ E +
Sbjct: 633 FYPSLIKCDLSEKTALWKGVLLLPFINSSELISAAQKSYDQLTPLEQQ 680
>gi|329664920|ref|NP_001192964.1| 5'-3' exoribonuclease 1 [Bos taurus]
gi|296491012|tpg|DAA33110.1| TPA: 5'-3' exoribonuclease 1 isoform 2 [Bos taurus]
Length = 1703
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKAIEKGETLPAE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D+V+E E+++ L+E F K YY +K DV DD F
Sbjct: 406 GEEVVTSKDNVEEEMEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 538 DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|169615619|ref|XP_001801225.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
gi|111060348|gb|EAT81468.1| hypothetical protein SNOG_10969 [Phaeosphaeria nodorum SN15]
Length = 1439
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 236/394 (59%), Gaps = 80/394 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP + Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A K ED+M + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDSDGATARKSEDQMFLDIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEK R+K + +G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-AEKA------RDKAIREGVEMPKEEA----FDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHK+M+YIR+ +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKVSEDMDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQT 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +ELA P L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLMHLCIVREYLELEFQELAEPGALGFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
P+LP L I EGA+ + N+YK + K + + +E
Sbjct: 297 PNLPHLHINEGALALMFNVYKTVLPKGKGYINEE 330
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 395 VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
VD S+E+ ++ + + E D +K+ YY+SKF+ + + + YV GL WVL YY
Sbjct: 490 VDISAEDAQNEMQKKYDEKFDAWKNDYYKSKFEWDRSNEEELRKLTENYVQGLQWVLYYY 549
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
Y+G SW WY+ +HY+P SD + + +F+ G QP
Sbjct: 550 YRGVASWPWYYGYHYSPMISDVKRGIKANIDFKLG-QP 586
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQ---FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q M ++ S +P +DSPIIDFYP DF +D+NGKK W+ V +PF++E
Sbjct: 591 QQLMGVLPDRSKSIVPKAYHPLMTSEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIEE 650
Query: 699 ERLHKALAPYYEKLSVEE 716
+RL KA+A + L+ +E
Sbjct: 651 DRLLKAMATKEDDLTADE 668
>gi|350591614|ref|XP_003483306.1| PREDICTED: 5'-3' exoribonuclease 1 [Sus scrofa]
Length = 1704
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D++++ +E+++ L+E F K YY +K DV DD F
Sbjct: 406 GEEVVTSKDNLEDETEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|324500092|gb|ADY40054.1| 5'-3' exoribonuclease 1 [Ascaris suum]
Length = 1700
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/370 (47%), Positives = 224/370 (60%), Gaps = 57/370 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + V ++IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEV---VTHKQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTHP D+ E+++ IF ID LF I+ P+++ +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 GCTHPNDEDISFRISEEQIFRDIFNYIDTLFSIIEPKRVFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASK--ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
F ++K E A KIAE + G +P EK FD NCITPGT FMARL L
Sbjct: 102 FMSAKNAELALKIAE---------SKGQEIPKEKR----FDPNCITPGTEFMARLHEQLQ 148
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+I +++ D W+GI+V LS N PGEGEHKIMD+IR +R+QPD+D NT+HCL G DAD
Sbjct: 149 YFIKMKISTDTAWQGIRVYLSGHNCPGEGEHKIMDFIRSERSQPDYDANTRHCLYGLDAD 208
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LIMLGL +HEP+F+++REE K RP + H+ G+D +
Sbjct: 209 LIMLGLCSHEPHFSLLREEVK--FGRP----PKHKHKSTPKTGVDG-------------I 249
Query: 297 EFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS+LREYL E L FPY E +DDWV M F VGNDF+PHLP + I E
Sbjct: 250 TFHLLHLSLLREYLSWEFRPIQDKLSFPYDMESVIDDWVLMGFLVGNDFIPHLPHVHIHE 309
Query: 355 GAVDRLVNLY 364
A+ L + Y
Sbjct: 310 DALPALYSTY 319
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 400 EEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHE-------YVLGLCWVLKYY 452
EE ND +W + + K + D + ++ + E Y+ + W L YY
Sbjct: 469 EENYENDCDVVWTHSVNRAFKDHKRNYYNDKMNYKNISKEELREQAEGYIRAIQWNLHYY 528
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
Y GC SW W++P HYAP+ SD + A+++ NFE
Sbjct: 529 YHGCCSWNWFYPHHYAPYISDVTDFADMEINFE 561
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI++FYP DF+ DLNGKK W+ V L+PF++E+RL A+A +L+ EE
Sbjct: 595 ESSPILEFYPRDFETDLNGKKNDWEAVVLIPFINEKRLLDAIASKEARLTDEE 647
>gi|380813906|gb|AFE78827.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRYGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|380813908|gb|AFE78828.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRYGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|440911813|gb|ELR61446.1| 5'-3' exoribonuclease 1 [Bos grunniens mutus]
Length = 1727
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKAIEKGETLPAE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D+V+E E+++ L+E F K YY +K D+ DD F
Sbjct: 406 GEEVVTSKDNVEEEMEDDD------LFETEFRQYKRTYYMTKMGVDIVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 538 DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|350591616|ref|XP_003132505.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Sus scrofa]
Length = 1691
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D++++ +E+++ L+E F K YY +K DV DD F
Sbjct: 406 GEEVVTSKDNLEDETEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|296491011|tpg|DAA33109.1| TPA: 5'-3' exoribonuclease 1 isoform 1 [Bos taurus]
Length = 1690
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE EKI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEEKI-------KKAIEKGETLPAE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D+V+E E+++ L+E F K YY +K DV DD F
Sbjct: 406 GEEVVTSKDNVEEEMEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 538 DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|291399909|ref|XP_002716613.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Oryctolagus
cuniculus]
Length = 1690
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 412 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYY 469
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 503
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 535 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEE 587
>gi|297672153|ref|XP_002814174.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pongo abelii]
Length = 1706
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDEAEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|383419335|gb|AFH32881.1| 5'-3' exoribonuclease 1 isoform b [Macaca mulatta]
Length = 1694
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|297286724|ref|XP_001112265.2| PREDICTED: 5'-3' exoribonuclease 1-like isoform 1 [Macaca mulatta]
Length = 1693
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|383419337|gb|AFH32882.1| 5'-3' exoribonuclease 1 isoform a [Macaca mulatta]
Length = 1707
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|109048976|ref|XP_001112305.1| PREDICTED: 5'-3' exoribonuclease 1-like isoform 2 [Macaca mulatta]
gi|355747003|gb|EHH51617.1| hypothetical protein EGM_11029 [Macaca fascicularis]
Length = 1706
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|238503103|ref|XP_002382785.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|220691595|gb|EED47943.1| exonuclease Kem1, putative [Aspergillus flavus NRRL3357]
gi|391870653|gb|EIT79830.1| 5'-3' exonuclease XRN1/KEM1/SEP1 involved in DNA strand exchange
and mRNA turnover [Aspergillus oryzae 3.042]
Length = 1409
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/386 (45%), Positives = 236/386 (61%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK ++ G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAISQGIEMPKE----DAFDSNCITPGTEFMAKLTEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG +V+
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQVQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L F + ER +DD++ M FFVGNDFL
Sbjct: 237 KPKELEHQNFYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ L +YK+ + K
Sbjct: 297 PNLPNLHINEGALAFLFKVYKEILPK 322
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E S E+ + +E+ F K +YY KF+ D+ + YV GL WVL Y
Sbjct: 486 VQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGLDNHEEMRKLTENYVQGLQWVLYY 545
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W+F +HYAP SD + DTNF+ G QP
Sbjct: 546 YYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQLG-QP 583
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPI+DFYP DF++D+NGKK W+ V +PF++E+RL AL L+ EE
Sbjct: 614 ESPIVDFYPRDFELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTPEE 665
>gi|169776419|ref|XP_001822676.1| exonuclease Kem1 [Aspergillus oryzae RIB40]
gi|83771411|dbj|BAE61543.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1409
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/386 (45%), Positives = 236/386 (61%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK ++ G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAISQGIEMPKE----DAFDSNCITPGTEFMAKLTEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG +V+
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQVQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L F + ER +DD++ M FFVGNDFL
Sbjct: 237 KPKELEHQNFYLLHLCMVREYLELEFQELERTDVLSFSFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ L +YK+ + K
Sbjct: 297 PNLPNLHINEGALAFLFKVYKEILPK 322
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E S E+ + +E+ F K +YY KF+ D+ + YV GL WVL Y
Sbjct: 486 VQELSAEDAQKAAEKKYEEKFQEWKSKYYTGKFEWGLDNHEEMRKLTENYVQGLQWVLYY 545
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W+F +HYAP SD + DTNF+ G QP
Sbjct: 546 YYRGIASWPWFFQYHYAPMISDVKKGLKADTNFQLG-QP 583
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPI+DFYP DF++D+NGKK W+ V +PF++E+RL AL L+ EE
Sbjct: 614 ESPIVDFYPRDFELDMNGKKMEWEAVVKIPFIEEKRLLDALKTKEHLLTPEE 665
>gi|297672155|ref|XP_002814175.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pongo abelii]
Length = 1693
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSLLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDEAEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPLDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|344288974|ref|XP_003416221.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Loxodonta africana]
Length = 1706
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 413 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYY 470
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 471 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 504
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 536 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMESCNHSLKKEE 588
>gi|291399905|ref|XP_002716611.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Oryctolagus
cuniculus]
Length = 1727
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 412 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYY 469
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 503
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 535 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEE 587
>gi|402861336|ref|XP_003895053.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Papio anubis]
Length = 1694
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|291399907|ref|XP_002716612.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Oryctolagus
cuniculus]
Length = 1702
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISEDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 412 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYY 469
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 470 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 503
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 535 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKKEE 587
>gi|402861338|ref|XP_003895054.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Papio anubis]
Length = 1706
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
D+ DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDIVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|110624792|ref|NP_061874.3| 5'-3' exoribonuclease 1 isoform a [Homo sapiens]
gi|74714582|sp|Q8IZH2.1|XRN1_HUMAN RecName: Full=5'-3' exoribonuclease 1; AltName:
Full=Strand-exchange protein 1 homolog
gi|24474444|gb|AAN11306.1| DNA strand-exchange protein SEP1 [Homo sapiens]
gi|119599377|gb|EAW78971.1| 5'-3' exoribonuclease 1, isoform CRA_a [Homo sapiens]
gi|146327192|gb|AAI41556.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|261857762|dbj|BAI45403.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1706
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|119599379|gb|EAW78973.1| 5'-3' exoribonuclease 1, isoform CRA_c [Homo sapiens]
Length = 1693
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+D ERL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFID-ERLLEAMETCNHSLKKEE 588
>gi|110624787|ref|NP_001036069.1| 5'-3' exoribonuclease 1 isoform b [Homo sapiens]
Length = 1693
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|332232376|ref|XP_003265382.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Nomascus leucogenys]
Length = 1693
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREE 589
>gi|332232374|ref|XP_003265381.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Nomascus leucogenys]
Length = 1706
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKREE 589
>gi|50949885|emb|CAH10490.1| hypothetical protein [Homo sapiens]
gi|119599378|gb|EAW78972.1| 5'-3' exoribonuclease 1, isoform CRA_b [Homo sapiens]
Length = 1694
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|358055066|dbj|GAA98835.1| hypothetical protein E5Q_05523 [Mixia osmundae IAM 14324]
Length = 1437
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 223/377 (59%), Gaps = 61/377 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP +I +++ Q EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVSERYP-MISQLIQEGQQP------------------EFDNLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+H + D E++M +AIF I+ LF +RP++ +MAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHKDGGDVHHRVTEEQMFLAIFTYIELLFSKIRPKQTFFMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +KE E R+ + G LP E FDSN ITPGTPFM RLSA L Y+
Sbjct: 102 FRTAKEAKEA-------RDAAIRKGEELPKEDP----FDSNAITPGTPFMTRLSAQLRYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+GI+VILS VPGEGEHKIM +IR +AQP ++PN +HCL G DADLI
Sbjct: 151 VNKKVSEDADWQGIQVILSGHEVPGEGEHKIMQFIRHSKAQPGYNPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE +AR K L+ + F
Sbjct: 211 MLGLLSHDPHFCLLREEVVFGKAR------------KTSQSLETK-------------NF 245
Query: 299 IFVRLSVLREYLEKEL----AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ LS+ REYL+ E A P L F Y ER +DD++ + FVGNDFLPHLP L I E
Sbjct: 246 YLLHLSLFREYLDLEFQSLAADPTLGFQYDLERIIDDFILLAIFVGNDFLPHLPGLHINE 305
Query: 355 GAVDRLVNLYKKTVYKT 371
GA+ L +YK+ + K
Sbjct: 306 GALTLLFEIYKRVLPKA 322
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 390 RSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVL 449
++ D +E+ E+ ++ +K YY K + D + Y+ GL WVL
Sbjct: 516 QTLPDFNEADFEDSYAQKLEQKMSAWKTDYYRDKLEFEFTDKPALHQLAFRYIEGLQWVL 575
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YYY G SW W++ +HYAP SD N+ ++ F+ G
Sbjct: 576 HYYYDGVASWGWFYDYHYAPKISDLQNVDHMEFVFDLG 613
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPI DFYP DFK+DLNGKK W+ V +PF+D+ RL A+ +L+ +E +
Sbjct: 646 ESPIKDFYPRDFKLDLNGKKQDWEAVVKIPFIDQARLLHAMEGRSARLTPDEQQ 699
>gi|242792196|ref|XP_002481904.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
gi|218718492|gb|EED17912.1| exonuclease Kem1, putative [Talaromyces stipitatus ATCC 10500]
Length = 1417
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 170/376 (45%), Positives = 228/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YPS+ Q + +IP EFDNLY DMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSI--------SQLIAENRIP-----------EFDNLYFDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHSDSDSPTHRMSEDQMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ + AEVA+ EK +A G +P E FDSNCITPGT FMARL+ L Y+
Sbjct: 102 FRSALD-----AEVAK--EKAIAQGIEMPKEDA----FDSNCITPGTEFMARLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G+ ++LS VPGEGEHKIM+YIR+ +AQPD+DPN +HCL G DADLI
Sbjct: 151 ISKKISEDVDWQGVDIVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P F ++REE G A+ + + F
Sbjct: 211 MLGLLSHDPYFCLLREEV--------------------TFGRQAQKKSKEL----EHQNF 246
Query: 299 IFVRLSVLREYLEKEL----AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE E A+ + + ER +DD++ M FFVGNDFLP+LP + I E
Sbjct: 247 YLLHLCIVREYLELEFQELKAIKDSSIDFDMERIIDDFILMAFFVGNDFLPNLPHMHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + YK+ + K
Sbjct: 307 GALALMFTKYKEALPK 322
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + EE + +E F K++YY KF +D A + YV GL WVL Y
Sbjct: 493 VYEQTAEEAQMAAEQKYEKKFQEWKNKYYMEKFGHGLEDEAAMTKLTENYVQGLQWVLFY 552
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW WYF +HYAP SD + +F+ G QP
Sbjct: 553 YYRGVVSWPWYFQYHYAPMISDVKKGLGANIDFKLG-QP 590
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A L+ EE
Sbjct: 621 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLPAMASREHLLTPEE 672
>gi|397512468|ref|XP_003826567.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan paniscus]
Length = 1705
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|301615368|ref|XP_002937144.1| PREDICTED: 5'-3' exoribonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 1714
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 221/372 (59%), Gaps = 65/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRITEDKIFADIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G +LP E + FDSNCITPG FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGEVLPTE----ARFDSNCITPGNEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + LS PGEGEHKIM++IR Q+ +PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVAIYLSGHETPGEGEHKIMEFIRSQKTKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
MLGL +HE +F+++REE K NQ R +T
Sbjct: 211 MLGLTSHEVHFSLLREEVRFGGKKNQKR---------------------------VTAPE 243
Query: 295 EVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I
Sbjct: 244 ETTFHLLHLSLMREYIDYEFSSLKNKISFEYDVERIIDDWILMGFLVGNDFIPHLPHLHI 303
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 304 NHDALPLLYRTY 315
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY SK V F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 435 YKRTYYMSKMGVEVVSDEFLADQAKCYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 494
Query: 475 INIAEVDTNFETG 487
NI+ + F G
Sbjct: 495 CNISHLKLTFNLG 507
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIID+YP+DFK DLNGK+ W+ V L+PF+DE+RL +A+ L+ EE
Sbjct: 540 DSPIIDYYPQDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMVSCNRSLAEEE 591
>gi|338714846|ref|XP_001917535.2| PREDICTED: 5'-3' exoribonuclease 1 [Equus caballus]
Length = 1726
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKDKIAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 369 YKTQEQLRQEENG------GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRY 419
YK + + + +EN G V S D+V++ +E+++ L+E F K Y
Sbjct: 384 YKEKRKSKDQENSICWAALDTNGEEVVASKDNVEDETEDDD------LFETEFRQYKRTY 437
Query: 420 YESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y +K DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI
Sbjct: 438 YMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNI 495
Query: 478 AEVDTNFETG 487
+ + +FE G
Sbjct: 496 SALSIHFELG 505
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNYSLKKEE 589
>gi|403414808|emb|CCM01508.1| predicted protein [Fibroporia radiculosa]
Length = 1961
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/371 (45%), Positives = 222/371 (59%), Gaps = 56/371 (15%)
Query: 3 VPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPC 62
+P FFR++S +YP Q + KIP EFDNLY+D NGIIH C
Sbjct: 17 IPKFFRYISERYPLT--------SQLIQENKIP-----------EFDNLYVDFNGIIHNC 57
Query: 63 THPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+HP D A E+++ +IF +D LF ++P+KL +MAIDGVAPRAKMNQQRSRRFR
Sbjct: 58 SHPNDGDAHFRLSEEQIFTSIFAYVDHLFGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+KE E +REK + G LP K FDSNCITPGT FMA+LSA L Y+++
Sbjct: 118 TAKEARE-------VREKAESKGEKLPDTKA----FDSNCITPGTEFMAKLSAQLQYFVN 166
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ D W + V+LS +VPGEGEHKIM+YIR RAQPD+DPN +HCL G DADLIML
Sbjct: 167 KKISEDANWSDVTVVLSGHDVPGEGEHKIMEYIRLSRAQPDYDPNVRHCLYGLDADLIML 226
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GL +H+P+F ++REE K A E + F
Sbjct: 227 GLLSHDPHFCLLREEVKFGPASRSKGSKSASLE---------------------SINFYL 265
Query: 301 VRLSVLREYLEKEL---AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L+++REYL+ E P LPF YS E +DD++ + FVGNDFLP+LP L I E +
Sbjct: 266 LHLTLMREYLDLEFFHDIEPVLPFSYSLEHIIDDFILLAVFVGNDFLPNLPDLHIHENGL 325
Query: 358 DRLVNLYKKTV 368
++L ++YKK++
Sbjct: 326 EKLFDVYKKSL 336
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPI+DFYP++F++DLNGKK W+ + +PF+D++RL A+ +L+ +E
Sbjct: 646 NSPILDFYPQEFELDLNGKKQDWEAIVKIPFIDQDRLLSAMRSREHRLTKDE 697
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
+ WV+ YYY G SW W++ +HYAP SD + ++ F+ GT
Sbjct: 571 MQWVMHYYYSGVASWSWFYNYHYAPRISDLKGVDQMSFQFDLGT 614
>gi|410266386|gb|JAA21159.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1706
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|397512470|ref|XP_003826568.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan paniscus]
Length = 1693
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|114589588|ref|XP_001161640.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Pan troglodytes]
Length = 1705
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|342184282|emb|CCC93763.1| putative 5'-3' exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 785
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 278/570 (48%), Gaps = 125/570 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ F+ WL R Y + C+E+ P +V G P D +K G FDNLYLDM
Sbjct: 1 MGIAGFYLWLKRWYAT----CIENIPMDVVSDAMRGIGHPEDGAK----GPGFDNLYLDM 52
Query: 56 NGIIHPCTHPEDK-PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG++HPC H P P E+EM IF +D +F+IVRPRK L M +DGVAP++KMNQQ
Sbjct: 53 NGLVHPCCHDTAPLPEPASEEEMFERIFAQVDLVFKIVRPRKCLVMCVDGVAPQSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA++E+ E A +L G PE + +D N ITP TPFM RL
Sbjct: 113 RSRRFRAAEESVESGRLSAECLAELRKKGL---PEPDIRPRWDHNVITPATPFMERLGLA 169
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
+ ++I +LN DP W I V+ SDA+V GEGEHKIM YIR R QP +DPNT H + G D
Sbjct: 170 VEWFILKKLNEDPAWGKIVVVFSDAHVAGEGEHKIMQYIRGLRVQPGYDPNTSHVIYGMD 229
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLI LGL THE N TI+R + + Q H
Sbjct: 230 ADLICLGLITHERNVTILRNQLTDSF--------QAAHNA-------------------- 261
Query: 295 EVEFIFVRLSVLREYLEKE-LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + ++ RE L K LA+ + + ER +DD+VF+CFFVGNDFLPH+P + ++
Sbjct: 262 ---FCYFHIAEYRECLRKSFLALSGM----NLERIIDDFVFLCFFVGNDFLPHIPLISLK 314
Query: 354 EGAVDRLVNLYKKTVYKTQ-------------------------EQLRQEENGGGGGR-- 386
++ L+N Y + + T QL++E G R
Sbjct: 315 AKGLEMLLNHYVEELCNTSYLTNKGEVNFAVLPGFLERFVANYMNQLKREYAIMWGMRSR 374
Query: 387 --------------GVKRSFDDV--DESSEEEESNDEVRLW------------------- 411
GVK + D+ D S+ ++ SN L
Sbjct: 375 AKCRVKESLEQCNAGVKAALGDLKPDRSNAQKISNVVYGLLLSAAKERARFVGGKEPLGF 434
Query: 412 ---EDGFKDRYYESKFDV-PKDDIAFRLMVGH---EYVLGLCWVLKYYYQGCRSWKWYFP 464
++ F+D+YYE+KF P + F + EY G WV++YY GC SW+W++P
Sbjct: 435 SYSDENFRDKYYETKFGWDPSNRRKFEKKIARCCAEYYRGTQWVMRYYTVGCPSWEWFYP 494
Query: 465 FHYAPFASD---FINIAEVDTNFETGTQPV 491
++YAP D F V+ + PV
Sbjct: 495 YYYAPLLEDLAAFSGTVNVEMHLGVPRHPV 524
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
DS + +FYP+ +D + F++QGV LPF+D E+L A
Sbjct: 551 DSVLGEFYPDTIDVDHSEANFSYQGVLKLPFIDSEKLQAA 590
>gi|124506737|ref|XP_001351966.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
gi|23504994|emb|CAD51777.1| exoribonuclease, putative [Plasmodium falciparum 3D7]
Length = 1311
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 243/416 (58%), Gaps = 56/416 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSS--------------------- 39
MGVP F+RWL +YP + E + +V ++ +D +
Sbjct: 1 MGVPTFYRWLVTRYPKIAKAVYETRDSDVYSRRTKYDENGEYFKVHDLNDYVNNTDELHC 60
Query: 40 KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 99
N NG FDN+YLDMNGIIH C+H ++ K +E+ + +F ++RLF I+ P+KLLY
Sbjct: 61 SDNINGY-FDNMYLDMNGIIHLCSHSDNSKRAKSNEEIFLNVFLYVERLFDIIEPKKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRA-SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDS 158
MAIDGVAP+AKMNQQRSRRF++ S EK A + ++E+ +A+ ++P E+ +++DS
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSISCSEIEKRAYL-ELKERFIAENKMVP---EETTYWDS 175
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N ITPGT FM LS L Y+I ++ ND WK + VI SD+NV GEGEHKI ++I+ QRA
Sbjct: 176 NVITPGTEFMHELSIALKYFIEHKITNDEKWKNVVVIFSDSNVCGEGEHKIFNFIKSQRA 235
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE--EFKPNQAR-------------- 262
QP +DPNT+H + G DADLIML LA+HEP F I+RE + P
Sbjct: 236 QPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIDLDPKSEEKEKTKKKEYVGMLK 295
Query: 263 ---PCDVCGQMGHEMKECVGLDAEPNPESV-------ITFGSEVEFIFVRLSVLREYLEK 312
C + + K+ +PN +V + + E + L++LREYL K
Sbjct: 296 SYDDLHFCTRYAKKEKKLFNKYNDPNYANVTISKNASLNYEYWNELQILDLTILREYLLK 355
Query: 313 ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
+L ++ ER LDD++F+CFF GNDFLPHLPS+ I G++D+L+ LY+K +
Sbjct: 356 DLFFDT---SFNMERCLDDFIFICFFCGNDFLPHLPSISIAGGSIDQLILLYQKVL 408
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 395 VDESSEEEESNDEVRLWEDGFKD----RYYESKFDVPKDDIA--FRLMVGHEYVLGLCWV 448
+ +++E E ++V L D D +YY+SKF + +D F V ++YV GL WV
Sbjct: 679 IKKANECENPKEDVELGGDENPDIIRMKYYKSKFHLDDNDAIEDFIKDVVYKYVEGLAWV 738
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
L YY+Q C W WY+P++YAP +SD I + + NFE
Sbjct: 739 LAYYFQSCPMWHWYYPYYYAPLSSDLI-VDNITFNFE 774
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP FK + NGKK+ +Q + LLPFVD+ER+ K P ++ L+ +E
Sbjct: 808 KDSPIIDFYPHTFKEEQNGKKYKYQWIILLPFVDKERIIKHARPLHDTLNNDE 860
>gi|238579002|ref|XP_002388906.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
gi|215450629|gb|EEB89836.1| hypothetical protein MPER_12027 [Moniliophthora perniciosa FA553]
Length = 653
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 161/326 (49%), Positives = 210/326 (64%), Gaps = 39/326 (11%)
Query: 47 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
EFDNLYLD NGIIH C+HP D+ A E+++ +IF +D LF +RP+KL +MA+DG
Sbjct: 14 EFDNLYLDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFGKIRPKKLFFMAVDG 73
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAPRAKMNQQRSRRFR +KE E +REK A G LP EK FDSNCITPG
Sbjct: 74 VAPRAKMNQQRSRRFRTAKEARE-------VREKAEAKGEKLPDEKA----FDSNCITPG 122
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FMA+LS L Y+++ ++ D W+ ++V+LS VPGEGEHKIM+YIR RAQPD++P
Sbjct: 123 TSFMAKLSEQLRYFVNKKITEDSNWRNVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNP 182
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
N +HCL G DADLIMLGL +H+P+F ++REE K AR K L++
Sbjct: 183 NMRHCLYGLDADLIMLGLLSHDPHFCLLREEVKFGPARK-----------KTNNSLES-- 229
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGND 342
+ F + LS+ REYL+ E P LPFPYS ER +DD++ + FVGND
Sbjct: 230 -----------INFYLLHLSLFREYLDTEFHSIAPALPFPYSLERVIDDFILLAVFVGND 278
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTV 368
FLP+LP L I E ++R+ +YK+ +
Sbjct: 279 FLPNLPDLHIHENGLERIFEVYKRVL 304
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K ++ D + Y GL WV+ YY+ G SW W++ +HYAP SD
Sbjct: 475 WKRDYYRTKLEINFDSPEEMGKLIRRYAEGLQWVMHYYFSGVASWGWFYDYHYAPRISDL 534
Query: 475 INIAEVDTNFETG 487
+ E+ +FE G
Sbjct: 535 KGLDEMSFDFELG 547
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI FYP F++DLNGKK W+ + +PF++E+ L A++ LS EE
Sbjct: 581 SPISHFYPLTFELDLNGKKQDWEAIVKIPFINEKELLAAMSSRENLLSSEE 631
>gi|426219417|ref|XP_004003922.1| PREDICTED: 5'-3' exoribonuclease 1 [Ovis aries]
Length = 1702
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPAE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D+++E E+++ L+E F K YY +K DV DD F
Sbjct: 406 GEEVVTSKDNLEEEMEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 457
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 458 CYVQAIQWILHYYYHGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 538 DSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|332818029|ref|XP_516791.3| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Pan troglodytes]
Length = 1692
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|410341471|gb|JAA39682.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|410266384|gb|JAA21158.1| 5'-3' exoribonuclease 1 [Pan troglodytes]
Length = 1693
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 HCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWAALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|392342051|ref|XP_003754494.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
gi|392350274|ref|XP_003750610.1| PREDICTED: 5'-3' exoribonuclease 1 [Rattus norvegicus]
Length = 1706
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDV 426
K + +++ +EN KR + V E+ ++ L+E F K YY +K V
Sbjct: 385 KDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETEDDDLFETEFRQYKRTYYMTKMGV 444
Query: 427 PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFET 486
F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE
Sbjct: 445 DVVSDEFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFEL 504
Query: 487 G 487
G
Sbjct: 505 G 505
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|296227920|ref|XP_002759573.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Callithrix jacchus]
Length = 1706
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK ++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKENKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQATCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|293349379|ref|XP_001069029.2| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
gi|293361286|ref|XP_217233.5| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
Length = 1723
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDV 426
K + +++ +EN KR + V E+ ++ L+E F K YY +K V
Sbjct: 385 KDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETEDDDLFETEFRQYKRTYYMTKMGV 444
Query: 427 PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFET 486
F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE
Sbjct: 445 DVVSDEFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFEL 504
Query: 487 G 487
G
Sbjct: 505 G 505
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|346974250|gb|EGY17702.1| 5'-3' exoribonuclease [Verticillium dahliae VdLs.17]
Length = 1404
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 172/375 (45%), Positives = 224/375 (59%), Gaps = 61/375 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQVIAENRIP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P+KL YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE AR EK + DG +P E + FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTALD-----AENAR--EKAIKDGVEMPKE----APFDSNCITPGTEFMAKLSRQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ ++ D W+ +++LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADL
Sbjct: 151 FVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +A ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRASKTK-SKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYL+ +EL L FPY ER +DD++ M FF+GNDFLPHLP L I
Sbjct: 247 FYLLHLCIVREYLDLEFQELKQDGILNFPYDLERVIDDFILMGFFIGNDFLPHLPRLHIN 306
Query: 354 EGAVDRLVNLYKKTV 368
EGA+ + +YK +
Sbjct: 307 EGALASMFRIYKSIL 321
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI+DFYP DF++D+NGKK W+ V +PF+DE+RL A+ P EKLS +E
Sbjct: 614 SPIVDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMGPVNEKLSDDE 664
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF-DVPKDDIAFRLMVGHE-YVLGLC 446
K + D+ ++ D + G+K +YY KF D D+ L E YV GL
Sbjct: 480 KATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWSPDNYDKELTALCENYVQGLQ 539
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL YYY+G SW W++ +HY+P SD I D NF+ G QP
Sbjct: 540 WVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLG-QP 582
>gi|296227918|ref|XP_002759572.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Callithrix jacchus]
Length = 1694
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISMDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKAQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK ++L+ +EN K + V E+ ++ L+E F K YY +K
Sbjct: 384 YKENKKLKGQENSLCWAALDKNEGEMVTSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQATCYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLRIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|293349383|ref|XP_002727167.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 3 [Rattus norvegicus]
gi|293361290|ref|XP_002730003.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|149018866|gb|EDL77507.1| rCG25308 [Rattus norvegicus]
Length = 1685
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDV 426
K + +++ +EN KR + V E+ ++ L+E F K YY +K V
Sbjct: 385 KDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETEDDDLFETEFRQYKRTYYMTKMGV 444
Query: 427 PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFET 486
F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE
Sbjct: 445 DVVSDEFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFEL 504
Query: 487 G 487
G
Sbjct: 505 G 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|431899770|gb|ELK07717.1| 5'-3' exoribonuclease 1 [Pteropus alecto]
Length = 1742
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNLKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAQFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKDKITFQYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD F YV + W+L YYY
Sbjct: 413 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYY 470
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 471 HGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 504
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 536 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKTEE 588
>gi|34365218|emb|CAE45950.1| hypothetical protein [Homo sapiens]
Length = 1706
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 223/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP +D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNGDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 369 YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF- 424
YK +++L+ +EN K + + E+ ++ L+E F K YY +K
Sbjct: 384 YKEKKKLKGQENSLCWTALDKNEGEMITSKDNLEDETEDDDLFETEFRQYKRTYYMTKMG 443
Query: 425 -DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +
Sbjct: 444 VDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIHNISTLKIH 501
Query: 484 FETG 487
FE G
Sbjct: 502 FELG 505
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|302506324|ref|XP_003015119.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
gi|291178690|gb|EFE34479.1| hypothetical protein ARB_06879 [Arthroderma benhamiae CBS 112371]
Length = 1302
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 235/386 (60%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKEGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK + K
Sbjct: 297 PNLPNLHINEGALAWMFKVYKDVLPK 322
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 659 GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
G DSPIIDFYP DF++D+NGKK W+ V +PF++EERL KA+A L+ EE
Sbjct: 609 GLMTSPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPEE 666
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + E+ + +E F KD+YY+ KF ++ + YV GL WVL Y
Sbjct: 487 VKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFY 546
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HYAP SD D +F+ G QP
Sbjct: 547 YYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLG-QP 584
>gi|341892378|gb|EGT48313.1| CBN-XRN-1 protein [Caenorhabditis brenneri]
Length = 1684
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 170/372 (45%), Positives = 226/372 (60%), Gaps = 50/372 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP C+ + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-----CLSEV---INESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+E+ V IF I+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++ ++ +K + G ++P EK FDSNCITPGT FM RL L +
Sbjct: 102 FMSARTAQTQL-------DKAIEKGEVIPTEK----RFDSNCITPGTYFMTRLHDQLDEW 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I + +D W+G K+ILS NVPGEGEHKIMDYIR +RA+ D+DPNT+HC+ G DADLI
Sbjct: 151 IKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F+++REE N RP + + N + T F
Sbjct: 211 MLGIVSHEPHFSLLREEVTFN-TRPRK---------------NEQKNKKPKRTDSDVKTF 254
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYL E A +LPF Y ER +DDW+ M VGNDFLPHLPS+ I + A
Sbjct: 255 HLLHLSLLREYLAWEFADVKESLPFAYDMERVVDDWIMMGLLVGNDFLPHLPSIHIHDDA 314
Query: 357 VDRLVNLYKKTV 368
+ L + YKK +
Sbjct: 315 LPLLYSTYKKVL 326
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 377 QEENGGGGGRGVKRSFDDVDESSEEEESNDEVRL------------------WEDGFKDR 418
+E+ G G + S ++D EEE NDE+ W ++
Sbjct: 432 EEDEVEGKSSGEELSPSNLDALLLEEEFNDELATLALSGMDDADFANNVEACWTKTLDNQ 491
Query: 419 YYESKFDVPKDDIAFRLMVGHE-------YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+ K D + ++ + E YV + W L YYY GC SW W++P HYAPF
Sbjct: 492 FKRHKKSYYADKLRYKNISKSELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 551
Query: 472 SDFINIAEVDTNFE 485
SD A++ FE
Sbjct: 552 SDVQGFADMKIEFE 565
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
P S I DFYP F+ DLNGK+ W+ V L+PF+ E RL +A+ +L+ EE+
Sbjct: 600 PAKSVIYDFYPSKFETDLNGKRNDWEAVVLIPFIAENRLLEAIESKRSRLTNEEN 654
>gi|293349381|ref|XP_002727166.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 2 [Rattus norvegicus]
gi|293361288|ref|XP_002730002.1| PREDICTED: 5'-3' exoribonuclease 1 isoform 1 [Rattus norvegicus]
Length = 1686
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Query: 370 KTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDV 426
K + +++ +EN KR + V E+ ++ L+E F K YY +K V
Sbjct: 385 KDKRKVKGQENSLSWAALDKREGEGVASRDNFEDETEDDDLFETEFRQYKRTYYMTKMGV 444
Query: 427 PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFET 486
F YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE
Sbjct: 445 DVVSDEFLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFEL 504
Query: 487 G 487
G
Sbjct: 505 G 505
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|347971872|ref|XP_313715.5| AGAP004430-PA [Anopheles gambiae str. PEST]
gi|333469066|gb|EAA09254.6| AGAP004430-PA [Anopheles gambiae str. PEST]
Length = 1705
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 273/556 (49%), Gaps = 128/556 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYP-----CLSELLRE---NQVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E M+ IF ++ LF+++RP+++ ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDADVHFRISEEMIFEGIFHYVEYLFKLIRPQQVFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ AE + EK A G + E S FDSNCITPGT FM RL L ++
Sbjct: 102 FRSA-------AEAQDLLEKAKAKGEEISSE----SPFDSNCITPGTSFMVRLQNALQHF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D WK VILS PGEGEHKIM+YIR +AQP +PNT+HCL G DADLI
Sbjct: 151 IQVKIATDRLWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THE F+++REE K G K+ L E+ F
Sbjct: 211 MLGLCTHERYFSLLREEVK------------FGKNDKKTSNL-------------KEIRF 245
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPH---------- 346
+ L++L EYLE E A L FP+ + +DDW+ + + VGNDF+PH
Sbjct: 246 YLLHLTLLSEYLELEFASVRDRLRFPFDIHKLIDDWILLVYLVGNDFIPHMPHLHINENA 305
Query: 347 -----------LPSLE--IREGAV----------DRLVNLYKKTVYKTQEQLRQEENGGG 383
LP+++ I E + RL N + L+ E G
Sbjct: 306 LPTLYEAYMDVLPNMDGYINEAGILNLPRLQMLMRRLANFDRDMFLDRYTDLKYLE--GK 363
Query: 384 GGRGVKRSFD-DVDE----------------SSE----EEESN----------DEVRLWE 412
G+ +FD D +E SSE E E N ++ L+E
Sbjct: 364 CGKNNLDAFDVDANEIIGASEMDKDLMALIMSSEMLDSEGEDNAAPVTLGDIENDPELFE 423
Query: 413 DGFKD---RYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
FK+ YY SK R Y+ L W L YYY+G SW WY+P HYAP
Sbjct: 424 QEFKNYKRNYYMSKMGYADFTEEVRAEQAECYIRALQWTLHYYYRGVVSWSWYYPHHYAP 483
Query: 470 FASDFINIAEVDTNFE 485
F SD N A + ++E
Sbjct: 484 FISDVDNFAHLKLDYE 499
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S + DFYP +F DLNGK+ AW+ V L+PF+DE+RL KA+ P L+ EE +
Sbjct: 534 NSSVYDFYPVNFATDLNGKQQAWEAVVLIPFIDEKRLLKAMGPCDAFLTDEEKQ 587
>gi|302656474|ref|XP_003019990.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
gi|291183768|gb|EFE39366.1| hypothetical protein TRV_05959 [Trichophyton verrucosum HKI 0517]
Length = 1303
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 235/386 (60%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKEGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK + K
Sbjct: 297 PNLPNLHINEGALAWMFKVYKDVLPK 322
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++EERL KA+A L+ +E
Sbjct: 615 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDE 666
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + E+ + +E F KD+YY+ KF ++ + YV GL WVL Y
Sbjct: 487 VKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFY 546
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HYAP SD D +F+ G QP
Sbjct: 547 YYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLG-QP 584
>gi|397607914|gb|EJK59848.1| hypothetical protein THAOC_19883 [Thalassiosira oceanica]
Length = 773
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 210/581 (36%), Positives = 293/581 (50%), Gaps = 146/581 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FRWL+ +YP+++ +++ +S P+ DN YLDMNGIIH
Sbjct: 60 MGIPKMFRWLTDQYPNIL------------NRRLGSATSIPH-----VDNFYLDMNGIIH 102
Query: 61 PCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PCTH ED+ DE EM IF +DRL++IV+PRK+LY+A+DGVAPRAKMNQQRSRR
Sbjct: 103 PCTHGNNEDEITILDETEMFKKIFGYVDRLYKIVQPRKVLYLAVDGVAPRAKMNQQRSRR 162
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+SKE AEK+A R DG + PE++ FDSNCITPGT FM +L + +
Sbjct: 163 FRSSKE-AEKLAATILAR-----DGSL--PERDA---FDSNCITPGTDFMLKLGLAMRKW 211
Query: 179 IHDRLNNDPGWK-GIKVILSDANVPGEGEHKIMDYIRKQRAQPDHD---------PNTQH 228
I + DP WK G V++S +VPGEGEHK+MD+IR +A D D P+ H
Sbjct: 212 IEYKQQTDPAWKNGCDVVVSGPDVPGEGEHKVMDFIRDTKALYDPDDLEKSPHWQPSLTH 271
Query: 229 CLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
L G DADLIMLGLATHEP+F ++RE+ + G+ H+ ++ +
Sbjct: 272 VLYGLDADLIMLGLATHEPHFLLLREKMS------VVMAGRGRHKHRK---------KKD 316
Query: 289 VITFGSEVEFIFVRLSVLREYLE----KELAMPNLPFPYSFERALDDWVFMCFFVGNDFL 344
++ + + +F + LS LRE + K L Y R +DD++FMC FVGNDFL
Sbjct: 317 MLEY-TRNDFDLLELSSLREMFKIQFRKFADSDRLKVQYDVCRVIDDFIFMCMFVGNDFL 375
Query: 345 PHLPSLEIREGAVDRLVN---------------------------LYKKTVYKTQEQLRQ 377
PH+P LEI GA+ ++N Y V++ + R+
Sbjct: 376 PHVPHLEIDNGALSLMLNNYIDLLPEWGGYLTDKGKIHPARLEQFFYNLAVFEEEHFRRR 435
Query: 378 --EENGGGGGRGVKRSFDDVDESSE----------EEESNDEV-----RLWEDG------ 414
EEN G G G + DD D E +E+ND + R+ DG
Sbjct: 436 AYEENEPGWGLGTENEQDDEDFYGEWYGGTPTPLVAKEANDGLVVETNRIDIDGGGESES 495
Query: 415 ------------------------------FKDRYYESKFDVP------KDDIAFRLMVG 438
+++ YYESK + + R +
Sbjct: 496 QAETTAPDTAPKTKVEKKFKKLHPRDASRSYREFYYESKLGISPLVTNRAEAQRDRRAIA 555
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAE 479
+Y+ GL W L YY+ GC SW W+FP YAP ++D +N++E
Sbjct: 556 RDYLEGLHWNLNYYHSGCCSWSWFFPHLYAPLSTDMVNLSE 596
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
SP+ FYP DF D NGK+ W+ + +PF+D ++L
Sbjct: 653 SPLAPFYPNDFDSDPNGKRQPWEAIVKIPFIDGDQL 688
>gi|148688999|gb|EDL20946.1| 5'-3' exoribonuclease 1 [Mus musculus]
Length = 1685
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|426342416|ref|XP_004037841.1| PREDICTED: 5'-3' exoribonuclease 1-like [Gorilla gorilla gorilla]
Length = 1432
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +K+ +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKM-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|190345269|gb|EDK37129.2| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/297 (51%), Positives = 206/297 (69%), Gaps = 15/297 (5%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVAR-I 135
M + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR+++E E R I
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQI 60
Query: 136 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVI 195
+E+ L I K K S +DSN ITPGTPFM +L+ L Y++ +L +DPGW ++VI
Sbjct: 61 KERELRGESIDEAIKGKRS-WDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQVI 119
Query: 196 LSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
+SDA VPGEGEHKIM++IR QR+ P++DPNT+HC+ G DADLI LGLATHEP+F ++RE+
Sbjct: 120 ISDATVPGEGEHKIMNFIRSQRSDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLRED 179
Query: 256 FKPNQARPCDVCGQ--MGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKE 313
NQ+R V Q M E K+ + P F+++ ++VLREYLE E
Sbjct: 180 VFANQSRQLRVSDQISMTQEQKDSLAAQDARKP-----------FLWLHINVLREYLETE 228
Query: 314 LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
L +P+LPF + ERA+DDW+FMCFFVGNDFLPHLPSL++R+ +D L+ +K+ V K
Sbjct: 229 LFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVPK 285
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKD---DIAFRLMVGHEYVLGLCWVLKYYYQGCRS 458
+E+ D VR+WE G+ DRYY++KF + D R +V Y+ G+ W L YYYQGC S
Sbjct: 454 DENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLV-RSYLEGISWALLYYYQGCPS 512
Query: 459 WKWYFPFHYAPFASDFINIAEV 480
W+WY+P+HYAPFA+DF+N++++
Sbjct: 513 WQWYYPYHYAPFAADFVNVSDI 534
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIIDFYPE+F+ID+NGKK +WQG+ALLPF++E+RL L Y +L+ +E +
Sbjct: 578 DSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLSVLESKYPELTDDERD 631
>gi|2281015|dbj|BAA21563.1| Dhm2 protein [Mus musculus]
Length = 1687
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 222/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|294951471|ref|XP_002786997.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239901587|gb|EER18793.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 728
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 268/530 (50%), Gaps = 115/530 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWLS +YP + + + ++IP EFD LYLDMNGIIH
Sbjct: 1 MGVPRFYRWLSERYPLI--------NEVIEPEQIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H + K EDE+ + IF+ I LF ++P+KLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 42 HCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFR 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ + E E+ + +G K + FDSN ITPGT FM RL+ L ++
Sbjct: 102 TALDAVEAT-------ERAVKNG---DHPKSIDTFFDSNSITPGTAFMERLTVQLRFFAQ 151
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++ +P W+G++V++S NVPGEGEHKIMDYIR ++QPD+DPNT+HC+ G DADLIML
Sbjct: 152 KMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIML 211
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
LATHEP ++REE + G + + V D
Sbjct: 212 SLATHEPYVALLREEV---------IFGPEKTDARALVRPD---------------RLQL 247
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ + VLREYL E +L ER +DD+V C VGNDFLPHLP + +G ++RL
Sbjct: 248 LHIYVLREYLALEFGEEDL------ERVIDDFVLFCMLVGNDFLPHLPYTGVGDGGLERL 301
Query: 361 VNLYKKTVYKTQEQLRQE----ENGGGGGRGVKRSFDDVDESSEEEESNDEVRL--WEDG 414
YK+ Y+ ++ + E+GGG + V SSEE+ DEV W+ G
Sbjct: 302 FGAYKE--YREKQISSADPWLVEHGGGINWANFLQYLTVYSSSEEKFLADEVSKGHWQIG 359
Query: 415 FK--------------------------------DRYYESKFDVPK-------------- 428
+ + ++ F PK
Sbjct: 360 SERERILFSPYHTFFNSERRRCGGNGRGGSHMSYEYQLKTGFGYPKSPEEARLQFYKVKG 419
Query: 429 --DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
DD A + +Y+ GL W YYY+G SW WY+ HYAPF +N
Sbjct: 420 ECDDKAEVDELVRDYLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVN 469
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
F SP+ +YPE F ID++G K W G L+ FVDE+ L A+
Sbjct: 516 FTSSSSPVKQYYPERFDIDIDGVKAPWGGTTLINFVDEDVLFDAM 560
>gi|81861755|sp|P97789.1|XRN1_MOUSE RecName: Full=5'-3' exoribonuclease 1; Short=mXRN1; AltName:
Full=Protein Dhm2; AltName: Full=Strand-exchange protein
1 homolog
gi|1894791|emb|CAA62819.1| 5'-3' exonuclease [Mus musculus]
Length = 1719
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|1894792|emb|CAA62820.1| 5'-3' exonuclease [Mus musculus]
Length = 1706
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|378727731|gb|EHY54190.1| phosphodiesterase/alkaline phosphatase D [Exophiala dermatitidis
NIH/UT8656]
Length = 1413
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/376 (45%), Positives = 228/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISQLIAENR--------IP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + E++M +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEEKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + REK + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTA-------LDAEKAREKAIKEGLEMPKE----DPFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP +DPN +HCL G DADLI
Sbjct: 151 ISKKVSEDVDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q + KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQATKKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL P L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLLHLCIVREYLELEFQELEQPGALSFPFDMERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + YK+ + K
Sbjct: 307 GALALMFQKYKEVLPK 322
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V++ ++E+ D + ++ F KD+YY KFD D+ + YV GL WVL Y
Sbjct: 490 VEDVTDEQTQQDMKKKYDAKFLEWKDKYYREKFDWGLDNDEELRKLAENYVQGLQWVLFY 549
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD D NF+ G QP
Sbjct: 550 YYRGIASWPWFYQYHYSPMISDIKKGLGADLNFQLG-QP 587
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL KA+ P LS +E
Sbjct: 617 KDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLKAMEPKDALLSEDE 669
>gi|302416751|ref|XP_003006207.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
gi|261355623|gb|EEY18051.1| 5'-3' exoribonuclease [Verticillium albo-atrum VaMs.102]
Length = 1383
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/375 (45%), Positives = 224/375 (59%), Gaps = 61/375 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQVIAENRIP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P+KL YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE AR EK + DG +P E + FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTALD-----AENAR--EKAIKDGVEMPKE----APFDSNCITPGTEFMAKLSRQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ ++ D W+ +++LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADL
Sbjct: 151 FVNKKVTEDADWQECEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDTNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +A ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRASKTK-SKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYL+ +EL L FPY ER +DD++ M FF+GNDFLPHLP L I
Sbjct: 247 FYLLHLCIVREYLDLEFQELKQDGILNFPYDLERVIDDFILMGFFIGNDFLPHLPRLHIN 306
Query: 354 EGAVDRLVNLYKKTV 368
EGA+ + +YK +
Sbjct: 307 EGALAYMFRIYKSIL 321
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+ P E+LS +E
Sbjct: 593 SPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMGPVNEELSDDE 643
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLC 446
K + D+ ++ D + G+K +YY KF+ P + + YV GL
Sbjct: 459 KATVVDITADDAKQHYADLYKQKYQGWKTKYYLQKFEDWAPDNYDKELTALCENYVQGLQ 518
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL YYY+G SW W++ +HY+P SD I D NF+ G QP
Sbjct: 519 WVLYYYYRGIASWPWFYAYHYSPLTSDVIKGLGADLNFKLG-QP 561
>gi|115495455|ref|NP_036046.2| 5'-3' exoribonuclease 1 [Mus musculus]
gi|162318350|gb|AAI56977.1| 5'-3' exoribonuclease 1 [synthetic construct]
gi|162319526|gb|AAI56134.1| 5'-3' exoribonuclease 1 [synthetic construct]
Length = 1723
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|354466144|ref|XP_003495535.1| PREDICTED: 5'-3' exoribonuclease 1 [Cricetulus griseus]
gi|344244388|gb|EGW00492.1| 5'-3' exoribonuclease 1 [Cricetulus griseus]
Length = 1726
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASKDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLADQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 505
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 589
>gi|327301545|ref|XP_003235465.1| exonuclease [Trichophyton rubrum CBS 118892]
gi|326462817|gb|EGD88270.1| exonuclease [Trichophyton rubrum CBS 118892]
Length = 1424
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/376 (45%), Positives = 233/376 (61%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKEGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q + KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQSQKKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK + K
Sbjct: 307 GALAWMFKVYKDVLPK 322
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 659 GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
G DSPIIDFYP DF++D+NGKK W+ V +PF+DEERL KA+A L+ EE
Sbjct: 609 GLMTTPDSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEE 666
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + E+ + +E F KD+YY+ KF ++ + YV GL WVL Y
Sbjct: 487 VKEVTAEDAQMAAEKKYEKKFQDWKDKYYKGKFGWGLENTEEMRKLTENYVQGLQWVLFY 546
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HYAP SD D +F+ G QP
Sbjct: 547 YYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLG-QP 584
>gi|380483599|emb|CCF40522.1| 5'-3' exoribonuclease, partial [Colletotrichum higginsianum]
Length = 553
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/378 (44%), Positives = 229/378 (60%), Gaps = 67/378 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + +T + R+K +++G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 102 RFRTALDTE-------KARDKAISEGVEMPKEPP----FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQPD+DPN +HCL G DADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDPNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IMLGL +H+P+F ++REE + N+A+ ++ Q
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRVNKAKTRELEHQ------------------------- 245
Query: 295 EVEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L ++REYLE +EL P L FP+ ER +DD++ M FFVGNDFLP+LP L
Sbjct: 246 --NFYLLHLCIVREYLELEFQELQQPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLPRL 303
Query: 351 EIREGAVDRLVNLYKKTV 368
I EGA+ + +YK +
Sbjct: 304 HINEGALAAMFRIYKSVL 321
>gi|452981894|gb|EME81653.1| hypothetical protein MYCFIDRAFT_215434 [Pseudocercospora fijiensis
CIRAD86]
Length = 1239
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 175/381 (45%), Positives = 227/381 (59%), Gaps = 66/381 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPI--------SQLIAENRIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH + K EDEM + IF I+ LF ++P+KL +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHNDSDSVTKARLSEDEMFLKIFNYIEFLFGKIKPQKLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEK R+K +A+G LP E FDSNCITPGT FMARL+ L Y
Sbjct: 102 RFRTALD-AEKA------RDKAIAEGRELPKEDP----FDSNCITPGTEFMARLTQQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
++ +++ D W+G +++LS VPGEGEHKIM+YIR+ ++Q D+DPN +HCL G DADL
Sbjct: 151 FVAKKVSEDGDWQGCEIVLSGHEVPGEGEHKIMEYIRQAKSQLDYDPNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE G+ G + +
Sbjct: 211 IMLGLLSHDPHFCLLREEV---------TFGRQGKSKSQDL---------------EHQN 246
Query: 298 FIFVRLSVLREYLEKEL-------AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L ++REYLE E A+ NLPF ER +DD++ M FFVGNDFLP+LP L
Sbjct: 247 FFLLHLCIVREYLELEFQELKEKGALGNLPF--DMERIIDDFILMAFFVGNDFLPNLPYL 304
Query: 351 EIREGAVDRLVNLYKKTVYKT 371
I EGA+ + +YKK + K
Sbjct: 305 HINEGALALMFAVYKKILPKA 325
>gi|294872967|ref|XP_002766468.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
gi|239867348|gb|EEQ99185.1| 5'->3' exoribonuclease, putative [Perkinsus marinus ATCC 50983]
Length = 649
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 269/530 (50%), Gaps = 115/530 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWLS +YP + + + ++IP EFD LYLDMNGIIH
Sbjct: 1 MGVPRFYRWLSERYPLI--------NEVIEPEQIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H + K EDE+ + IF+ I LF ++P+KLLYMA+DGVAPRAKMNQQRSRRFR
Sbjct: 42 HCSHGDTPDVAKPEDEVWMDIFKYISDLFTHIKPKKLLYMAVDGVAPRAKMNQQRSRRFR 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ + E E+ + +G K + FDSN ITPGT FM RL+ L ++
Sbjct: 102 TALDAVEAT-------ERAVKNG---DHPKSIDTFFDSNSITPGTAFMERLTVQLRFFAQ 151
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++ +P W+G++V++S NVPGEGEHKIMDYIR ++QPD+DPNT+HC+ G DADLIML
Sbjct: 152 KMISENPLWQGVEVVVSGPNVPGEGEHKIMDYIRATKSQPDYDPNTRHCVYGLDADLIML 211
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
LATHEP ++REE + G + + V D
Sbjct: 212 SLATHEPYVALLREEV---------IFGPEKTDARALVRPD---------------RLQL 247
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ + VLREYL E +L ER +DD+V C VGNDFLPHLP + +G ++RL
Sbjct: 248 LHIYVLREYLALEFGEEDL------ERVIDDFVLFCMLVGNDFLPHLPYTGVGDGGLERL 301
Query: 361 VNLYKKTVYKTQEQLRQE----ENGGGGGRGVKRSFDDVDESSEEEESNDEVRL--WEDG 414
+ YK+ Y+ ++ + E+GGG + V SSEE+ DEV W+ G
Sbjct: 302 FSAYKE--YREKQISSADPWLVEHGGGINWANFLQYLTVYSSSEEKFLADEVSKGHWQIG 359
Query: 415 FK--------------------------------DRYYESKFDVPK-------------- 428
+ + ++ F PK
Sbjct: 360 SERERILFSPYHTFFNSERRRCGGNGRGGSHMSYEYQLKTGFGYPKSPEEARLQFYKVKG 419
Query: 429 --DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
DD A + +Y+ GL W YYY+G SW WY+ HYAPF +N
Sbjct: 420 ECDDKAEVDELVRDYLEGLQWSYSYYYRGPPSWHWYYRHHYAPFVCTMVN 469
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
F SP+ +YPE F ID++G K W G L+ FVDE+ L A+
Sbjct: 516 FTSSSSPVKQYYPERFDIDIDGVKVPWGGTTLINFVDEDVLFDAM 560
>gi|326480075|gb|EGE04085.1| 5'-3' exoribonuclease [Trichophyton equinum CBS 127.97]
Length = 1424
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 236/386 (61%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ E+ + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--ERAIKEGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK+ + K
Sbjct: 297 PNLPNLHINEGALAWMFKVYKEILPK 322
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DEERL KA+A L+ EE
Sbjct: 615 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEE 666
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ KF ++ + YV GL WVL YYY+G SW W++ +HYAP SD
Sbjct: 510 WKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDI 569
Query: 475 INIAEVDTNFETGTQP 490
D +F+ G QP
Sbjct: 570 HLGLGADVDFKLG-QP 584
>gi|326468946|gb|EGD92955.1| exonuclease [Trichophyton tonsurans CBS 112818]
Length = 1424
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/386 (44%), Positives = 236/386 (61%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ E+ + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--ERAIKEGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQSQK 236
Query: 298 ---------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK+ + K
Sbjct: 297 PNLPNLHINEGALAWMFKVYKEILPK 322
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DEERL KA+A L+ EE
Sbjct: 615 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPEE 666
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ KF ++ + YV GL WVL YYY+G SW W++ +HYAP SD
Sbjct: 510 WKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFYYYRGVASWPWFYRYHYAPMISDI 569
Query: 475 INIAEVDTNFETGTQP 490
D +F+ G QP
Sbjct: 570 HLGLGADVDFKLG-QP 584
>gi|259480959|tpe|CBF74062.1| TPA: exonuclease II (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1398
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 231/387 (59%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + + +EK +A G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALDAEQA-------KEKAIAQGIEMPKEDP----FDSNCITPGTEFMAKLTEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFCLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYL+ E + FPY FER +DD++ M FFVGNDF
Sbjct: 236 KKPKELEHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+ + K
Sbjct: 296 LPNLPNLHINEGALSLMFKVYKEVLPK 322
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DE RL ALA L+ EE
Sbjct: 613 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEE 664
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY KF D+ + YV GL WVL YYY+G SW W+F HYAP SD
Sbjct: 508 WKDKYYMEKFGWGLDNHEEMRKLTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMISDV 567
Query: 475 INIAEVDTNFETG 487
D NF G
Sbjct: 568 KKGLNADMNFRLG 580
>gi|74210743|dbj|BAE25024.1| unnamed protein product [Mus musculus]
Length = 778
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 221/368 (60%), Gaps = 58/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S + PGEGEHKIM++IR ++A+P HDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHDTPGEGEHKIMEFIRSEKAKPGHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 211 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 246
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E + + F Y E+ +DDW+ M F VGNDF+PHLP L I A
Sbjct: 247 HLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGNDFIPHLPHLHINHDA 306
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 307 LPLLYGTY 314
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G GV + DE+ +++ E R +K YY +K V F YV
Sbjct: 407 GEGVASRDNFEDETEDDDLFETEFR----QYKRTYYMTKMGVDVVSDEFLANQAACYVQA 462
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W+L YYY G +SW WY+P+HYAPF SD +I+ + +FE G
Sbjct: 463 IQWILHYYYHGVQSWSWYYPYHYAPFLSDIRSISTLKIHFELG 505
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ L EE
Sbjct: 537 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLEAMETCNHSLKKEE 589
>gi|408388369|gb|EKJ68055.1| hypothetical protein FPSE_11866 [Fusarium pseudograminearum CS3096]
Length = 1391
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 180/431 (41%), Positives = 249/431 (57%), Gaps = 72/431 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEK R+K +++G +P E+ FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTALD-AEKA------RDKAISEGVEIPKEEP----FDSNCITPGTEFMAKLSQQLRY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP+++ N +HCL G DADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +A ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRASKSK-SKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLEKELA----MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+LPSL I
Sbjct: 247 FYLLHLCIVREYLEMEFQELGEEGTLSFPFDLERVIDDFILMAFFVGNDFLPNLPSLHIN 306
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWED 413
EGA+ + +YK + K + ENG ++R ++ SN E+ +E+
Sbjct: 307 EGALANMFRIYKSILPKCDGYIN--ENGVINMGRLQRLLGEL--------SNTEIDAFEN 356
Query: 414 GFKD-RYYESK 423
D ++Y SK
Sbjct: 357 DVSDEKWYASK 367
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI+DFYP DF++D+NGKK W+ V +PF+DE+RL A+ P E L +E
Sbjct: 601 DSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDE 652
>gi|67902396|ref|XP_681454.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
gi|40740017|gb|EAA59207.1| hypothetical protein AN8185.2 [Aspergillus nidulans FGSC A4]
Length = 1699
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 231/387 (59%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + + +EK +A G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALDAEQA-------KEKAIAQGIEMPKEDP----FDSNCITPGTEFMAKLTEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFCLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYL+ E + FPY FER +DD++ M FFVGNDF
Sbjct: 236 KKPKELEHQNFYLLHLCMVREYLQLEFQELEEEGIIDFPYEFERVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+ + K
Sbjct: 296 LPNLPNLHINEGALSLMFKVYKEVLPK 322
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DE RL ALA L+ EE
Sbjct: 613 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLLDALATREHLLTPEE 664
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 38/73 (52%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY KF D+ + YV GL WVL YYY+G SW W+F HYAP SD
Sbjct: 508 WKDKYYMEKFGWGLDNHEEMRKLTENYVQGLQWVLFYYYRGIASWPWFFNSHYAPMISDV 567
Query: 475 INIAEVDTNFETG 487
D NF G
Sbjct: 568 KKGLNADMNFRLG 580
>gi|46124843|ref|XP_386975.1| hypothetical protein FG06799.1 [Gibberella zeae PH-1]
Length = 1370
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 180/431 (41%), Positives = 248/431 (57%), Gaps = 72/431 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEK R+K +++G +P E+ FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTALD-AEKA------RDKAISEGVEIPKEEP----FDSNCITPGTEFMAKLSQQLRY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP+++ N +HCL G DADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNHNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +A ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRASKSK-SKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+LPSL I
Sbjct: 247 FYLLHLCIVREYLEMEFQELGEEGALSFPFDLERVIDDFILMAFFVGNDFLPNLPSLHIN 306
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWED 413
EGA+ + +YK + K + ENG ++R ++ SN E+ +E
Sbjct: 307 EGALANMFRIYKSILPKCDGYIN--ENGVINMGRLQRLLGEL--------SNTEIDAFES 356
Query: 414 GFKD-RYYESK 423
D ++Y SK
Sbjct: 357 DVSDEKWYASK 367
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI+DFYP DF++D+NGKK W+ V +PF+DE+RL A+ P E L +E
Sbjct: 583 DSPIVDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLDAMRPKNELLEPDE 634
>gi|258571185|ref|XP_002544396.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904666|gb|EEP79067.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1372
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/376 (46%), Positives = 234/376 (62%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEMAK--EKAIREGVEMPKE----DAFDSNCITPGTEFMAKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++VILS VPGEGEHKIM+YIR+ +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQSKAQPGYDPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + Q ++KE F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGR--------QSQKKVKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL + L F + ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLLHLCIVREYLELEFQELEVEGALKFDFDMERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK+ + K
Sbjct: 307 GALAWMFKVYKEVLPK 322
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++E RL A+A L+ EE
Sbjct: 550 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINETRLLNAMATKEHLLTPEE 601
>gi|313230942|emb|CBY18940.1| unnamed protein product [Oikopleura dioica]
Length = 1623
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 171/390 (43%), Positives = 229/390 (58%), Gaps = 55/390 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+R++S +YP C+ Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRYMSERYP-----CLS---QVIKEHQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC+HP +D P + E+++ IF I+ LFRI+RPRK+ +MA+DGVAPRAKMNQQRSRR
Sbjct: 42 PCSHPNDDDPHFRITEEQIFKDIFHYIECLFRIIRPRKVFFMAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE E + E L +G FDSN ITPGT FM RL L Y+
Sbjct: 102 FRSAKEAEENERKAKEKGESLPTEG-----------KFDSNVITPGTGFMVRLDKQLRYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ +D W+GI V LS PGEGEHKIM+YIR QR DHDP T+HCL G DADLI
Sbjct: 151 IQNKITHDDAWRGITVFLSGHETPGEGEHKIMEYIRYQRTLSDHDPRTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGLATHEPNF+++REE + +A+ + + + G P ++ F
Sbjct: 211 MLGLATHEPNFSLLREEIQFTKAKDKMIIVFIPY---RSAGRQNRP---------EDITF 258
Query: 299 IFVRLSVLREYLEKEL-----------AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ LSV+R+Y+ E + ++ Y ER +DDWV M F VGNDF+PHL
Sbjct: 259 HLLHLSVMRDYIHHEFKDLRTSLASRKSSGDIEIEYDLERLIDDWVLMGFLVGNDFVPHL 318
Query: 348 PSLEIREGAVDRLVNLYKKTVYKTQEQLRQ 377
P+++I++ + L Y K V K + L +
Sbjct: 319 PNMQIKQDHLPVLYKSYSKVVPKLGKYLTE 348
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 375 LRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWED-------GFKDRYYESKFDVP 427
L QEE+G G + +D E + + +W+D +++ YY SKF+
Sbjct: 408 LEQEEDGKFDGDIAQGDLIPIDP----RELSTDFGVWDDVTKQEFVDYRNGYYHSKFN-K 462
Query: 428 KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ F+ + +EYV L W++ YYY G +SW WYFPFHY+PF SD + + E + ++ G
Sbjct: 463 RLTKEFQYTMKNEYVRALQWIMHYYYNGVQSWGWYFPFHYSPFLSDMVKLKECNLKYDYG 522
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
S IIDFYP +F+ DLNGK W+ V L+PF+DE RL++A+ P KLS
Sbjct: 557 SSIIDFYPTEFETDLNGKMQDWEAVVLIPFIDENRLYEAMQPALAKLS 604
>gi|440632608|gb|ELR02527.1| 5'-3' exoribonuclease 1 [Geomyces destructans 20631-21]
Length = 1388
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/383 (43%), Positives = 229/383 (59%), Gaps = 60/383 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E++M +AIF I+ LF ++P KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLFGKIKPHKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + +V REK + +G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTA-------LDVENAREKAIREGKEMPKEEA----FDSNCITPGTEFMAKLTEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADLI
Sbjct: 151 INKKVSEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRLSKAQPDYDHNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + ++ H+ F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSKAK-SKELEHQ-----------------------NF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL P + F + ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLMHLCIVREYLEIEFQELKEPGIMGFAFDLERVIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQ 377
GA+ + +YK + K L +
Sbjct: 307 GALALMFKIYKSVLPKAGGYLNE 329
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
VD S+EE ++ + + +E+ F KD+YY+ KF+ +D+ + YV GL WVL Y
Sbjct: 485 VDVSAEEAQAEMDKK-YEEKFQEWKDKYYDGKFEWKRDNETELTKLAENYVQGLQWVLYY 543
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYQG SW WY+ +HY+P SD I + D NF+ G QP
Sbjct: 544 YYQGVVSWPWYYAYHYSPMISDVIKGLKADINFKLG-QP 581
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+AP + LS E
Sbjct: 613 SPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMAPKNDMLSDAE 663
>gi|310794358|gb|EFQ29819.1| XRN 5'-3' exonuclease [Glomerella graminicola M1.001]
Length = 1407
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 165/375 (44%), Positives = 225/375 (60%), Gaps = 61/375 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + +T + R+K +++G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 102 RFRTALDTE-------KARDKAISEGVEMPKEPP----FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYDSNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE + ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRVSKAK-TRELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYLE +EL P L FP+ ER +DD++ M FFVGNDFLP+LP L I
Sbjct: 247 FYLLHLCIVREYLELEFQELKEPGRLSFPFDLERVIDDFILMAFFVGNDFLPNLPRLHIN 306
Query: 354 EGAVDRLVNLYKKTV 368
EGA+ + +YK +
Sbjct: 307 EGALAAMFRIYKSVL 321
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 414 GFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
G+K +YY KF P+ + YV GL WVL YYY+G SW W++ +HY+P
Sbjct: 504 GWKTKYYLQKFPEWAPEQYETELTKLCENYVQGLQWVLYYYYRGIASWPWFYQYHYSPLT 563
Query: 472 SDFINIAEVDTNFETGTQP 490
SD D NF+ G QP
Sbjct: 564 SDVTRGLGADLNFKLG-QP 581
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPI DFYP DF++D+NGKK W+ V +PF+DE+RL A+ P + LS + E
Sbjct: 612 NSPIYDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMEPKNKLLSEGQKE 665
>gi|429857774|gb|ELA32622.1| exonuclease kem1 [Colletotrichum gloeosporioides Nara gc5]
Length = 1398
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 253/436 (58%), Gaps = 82/436 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTHKDTGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEK R+K +++G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 102 RFRTALD-AEKA------RDKAISEGVEMPKEPP----FDSNCITPGTEFMAKLTQQLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP++DPN +HCL G DADL
Sbjct: 151 FVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPEYDPNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEF-----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
IMLGL +H+P+F ++REE N+AR ++ H+
Sbjct: 211 IMLGLLSHDPHFCLLREEVTFGRHNKNKAR------ELEHQ------------------- 245
Query: 293 GSEVEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
F + L ++REYLE +EL P L FP+ ER +DD++ M FFVGNDFLP+LP
Sbjct: 246 ----NFYLMHLCIVREYLELEFQELQEPGKLGFPFDLERVIDDFILMAFFVGNDFLPNLP 301
Query: 349 SLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEV 408
L I EGA+ + +YK + K + + GG + R + EE DE+
Sbjct: 302 RLHINEGALAAMFRIYKDILPKGDGYINE-----GGIINLPRL-----QKLLEELGKDEI 351
Query: 409 RLWE-DGFKDRYYESK 423
+E D +++++SK
Sbjct: 352 ESFENDASNEKWFQSK 367
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPI DFYP DF++D+NGKK W+ + +PF+DE+RL A+A ++LS +E
Sbjct: 613 NSPIYDFYPRDFELDMNGKKMEWEAIVKIPFIDEKRLLSAMATKNDQLSQQE 664
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 414 GFKDRYYESKF-DVPKDDIAFRLM-VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+K +YY KF + P++ L+ + YV GL WVL YYY G SW W++ +HY+P
Sbjct: 505 AWKTKYYLEKFPEWPQESYDKELVKLCENYVQGLQWVLHYYYHGIASWPWFYQYHYSPLT 564
Query: 472 SDFINIAEVDTNFETGTQP 490
SD + D F G QP
Sbjct: 565 SDVVKGLGADLKFTLG-QP 582
>gi|146419185|ref|XP_001485556.1| hypothetical protein PGUG_01227 [Meyerozyma guilliermondii ATCC
6260]
Length = 909
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/297 (51%), Positives = 205/297 (69%), Gaps = 15/297 (5%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVAR-I 135
M + +F+ DR+ + RPRK+L +A+DGVAPRAKMNQQRSRRFR+++E E R I
Sbjct: 1 MFLDVFKYTDRVLMMARPRKVLMIAVDGVAPRAKMNQQRSRRFRSAQEAKIADEEKQRQI 60
Query: 136 REKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVI 195
+E+ L I K K S +DSN ITPGTPFM +L+ L Y++ +L +DPGW ++VI
Sbjct: 61 KERELRGESIDEAIKGKRS-WDSNAITPGTPFMDKLATALRYWVAYKLTSDPGWANVQVI 119
Query: 196 LSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
+SDA VPGEGEHKIM++IR QR P++DPNT+HC+ G DADLI LGLATHEP+F ++RE+
Sbjct: 120 ISDATVPGEGEHKIMNFIRLQRLDPEYDPNTKHCIYGLDADLIFLGLATHEPHFRVLRED 179
Query: 256 FKPNQARPCDVCGQ--MGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKE 313
NQ+R V Q M E K+ + P F+++ ++VLREYLE E
Sbjct: 180 VFANQSRQLRVLDQILMTQEQKDSLAAQDARKP-----------FLWLHINVLREYLETE 228
Query: 314 LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
L +P+LPF + ERA+DDW+FMCFFVGNDFLPHLPSL++R+ +D L+ +K+ V K
Sbjct: 229 LFVPHLPFTFDVERAIDDWIFMCFFVGNDFLPHLPSLDVRDNGIDILLGCWKRVVPK 285
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 59/82 (71%), Gaps = 4/82 (4%)
Query: 402 EESNDEVRLWEDGFKDRYYESKFDVPKD---DIAFRLMVGHEYVLGLCWVLKYYYQGCRS 458
+E+ D VR+WE G+ DRYY++KF + D R +V Y+ G+ W L YYYQGC S
Sbjct: 454 DENGDAVRMWEPGYHDRYYQTKFHLTTQEEIDETRRGLV-RSYLEGISWALLYYYQGCPS 512
Query: 459 WKWYFPFHYAPFASDFINIAEV 480
W+WY+P+HYAPFA+DF+N++++
Sbjct: 513 WQWYYPYHYAPFAADFVNVSDI 534
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSPIIDFYPE+F+ID+NGKK +WQG+ALLPF++E+RL L Y +L+ +E +
Sbjct: 578 DSPIIDFYPEEFEIDMNGKKMSWQGIALLPFIEEKRLLLVLESKYPELTDDERD 631
>gi|315049287|ref|XP_003174018.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
gi|311341985|gb|EFR01188.1| hypothetical protein MGYG_04190 [Arthroderma gypseum CBS 118893]
Length = 1424
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 170/387 (43%), Positives = 236/387 (60%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE+A+ E+ + +G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AELAK--ERAIKEGIEMPKE----DAFDSNCITPGTEFMAKLTKQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HCL G DADL
Sbjct: 150 FVNKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +TFG + +
Sbjct: 210 IMLGLLSHDPHFCLLREE----------------------------------VTFGRQSQ 235
Query: 298 ----------FIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDF
Sbjct: 236 KKSKELEHQNFYLLHLCIVREYLELEFQELKLDGALQFPFDMERIIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+ + K
Sbjct: 296 LPNLPNLHINEGALAWMFKVYKEILPK 322
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E + E+ + +E+ F KD+YY+ KF ++ + YV GL WVL Y
Sbjct: 486 VKEPTAEDAQMAAEKKYENKFQDWKDKYYKGKFGWGLENAEEMRKLTENYVQGLQWVLFY 545
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HYAP SD D +F+ G QP
Sbjct: 546 YYRGVASWPWFYRYHYAPMISDIHLGLGADVDFKLG-QP 583
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF++EERL KA+A L+ +E
Sbjct: 614 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEEERLLKAMATKEHLLTPDE 665
>gi|320590324|gb|EFX02767.1| exonuclease [Grosmannia clavigera kw1407]
Length = 1463
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 178/411 (43%), Positives = 242/411 (58%), Gaps = 71/411 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCTHSDSDDAFTRLGEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVAR +K +A+G LP + FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTALD-----AEVAR--KKAIAEGAQLPTDDP----FDSNCITPGTEFMAKLSKQLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+ V+LS +VPGEGEHKIM+YIR +AQ D+ N +HCL G DADLI
Sbjct: 151 VNKKVSEDKEWQQCTVVLSGHDVPGEGEHKIMEYIRNAKAQKDYSANMRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE G + K T E+E
Sbjct: 211 MLGLLSHDPHFCLLREEVT------------FGRQTK---------------TKSKELEH 243
Query: 298 --FIFVRLSVLREYLEKELAM----PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
F + L ++REYLE E +PF ++ ER +DD++ M FFVGNDFLP+LP L
Sbjct: 244 QNFYLLHLCIVREYLELEFQELKTDKTMPFAFNMERIIDDFILMAFFVGNDFLPNLPRLH 303
Query: 352 IREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEE 402
I EGA+ + ++YK+ + K + + + GG +KR ++E S+EE
Sbjct: 304 INEGALATMFSIYKRVLPKCEGYINE-----GGAVNLKRLGLLLEEFSKEE 349
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 659 GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
G +DSPI+DFYP DF++D+NGKK W+ V +PF+DE RL A+ P LS +E
Sbjct: 655 GLMTEEDSPIVDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLLTAMKPKNALLSADE 712
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 415 FKDRYYESKFDVPKDDIAFRLM-VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+KD YY KF ++ + + YV GL WVL YYY+G SW W++ +HY+P SD
Sbjct: 555 WKDGYYREKFAWTDGQLSEEVRKLCENYVQGLQWVLYYYYRGIASWPWFYHYHYSPLISD 614
Query: 474 FINIAEVDTNFETGTQP 490
I D NF+ G QP
Sbjct: 615 VIKGLGADLNFKLG-QP 630
>gi|268533038|ref|XP_002631647.1| C. briggsae CBR-XRN-1 protein [Caenorhabditis briggsae]
Length = 1183
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 229/372 (61%), Gaps = 51/372 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP + + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYPCL--------SEVINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+E+ V IF I+ L+ +++P+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIKPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++ ++ ++ +A G +LP EK FDSNCITPGT FM RL L +
Sbjct: 102 FMSARTAQTQM-------DQAIAKGEVLPSEK----RFDSNCITPGTYFMTRLHEKLDAW 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ ++ +D W+G K+ILS NVPGEGEHKIMD+IR +RA +DPNT+HC+ G DADLI
Sbjct: 151 VREKSVSDTRWQGRKIILSGHNVPGEGEHKIMDFIRSERAGTGYDPNTRHCMYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F+++REE N RP + + K+ D+E V TF
Sbjct: 211 MLGIVSHEPHFSLLREEVTFN-TRP-----RKNDQKKKPKRTDSE-----VKTFH----- 254
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYL E A +LPF Y ER +DDW+ M VGNDFLPHLPS+ I + A
Sbjct: 255 -LLHLSLLREYLAWEFADVKESLPFEYDMERIVDDWIMMGLLVGNDFLPHLPSIHIHDDA 313
Query: 357 VDRLVNLYKKTV 368
+ L + YKK +
Sbjct: 314 LPLLYSTYKKVL 325
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 25/134 (18%)
Query: 377 QEENGGGGGRGVKRSFDDVDESSEEEESNDEVRL------------------WEDGFKDR 418
+E+ G G+ D D EEE NDE+ W ++
Sbjct: 420 EEDKNNGTGKTSAEESPDYDAQFLEEEFNDELATLALSGMDDADFANNVEACWTKAIDNQ 479
Query: 419 YYESKFDVPKDDIAFRLMVGHE-------YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+ K D + ++ + E YV + W L YYY GC SW W++P HYAPF
Sbjct: 480 FKRHKKYYYSDKLRYKNISKAELRAQAEGYVRAIQWNLHYYYHGCVSWSWFYPHHYAPFI 539
Query: 472 SDFINIAEVDTNFE 485
SD A++ FE
Sbjct: 540 SDVQGFADMKIEFE 553
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
P S I DFYP F+ DLNGKK W+ V L+PF++E+RL +A+ +LS EE
Sbjct: 588 PAQSAIHDFYPSKFETDLNGKKNDWEAVVLIPFIEEKRLLEAIESKQNRLSQEE 641
>gi|167521441|ref|XP_001745059.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776673|gb|EDQ90292.1| predicted protein [Monosiga brevicollis MX1]
Length = 235
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/257 (57%), Positives = 187/257 (72%), Gaps = 25/257 (9%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FF WL+++YPS++ E ++PNP G+EFDNLYLDMNGIIH
Sbjct: 1 MGVPQFFAWLAQRYPSIVTVLRE---------------TRPNPLGLEFDNLYLDMNGIIH 45
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPED+P+PK E EMM+AIF IDRLFR++RPR+L++MA+DGVAPRAKMNQQR+RRFR
Sbjct: 46 PCCHPEDRPSPKSEAEMMLAIFTYIDRLFRVIRPRRLVFMAVDGVAPRAKMNQQRARRFR 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSH---FDSNCITPGTPFMARLSACLHY 177
A++E E R+ L A G L +++ FDSNCITPGT FM+RLSA L +
Sbjct: 106 AAQEGREA-------RQDLQASGDNLSAFRQRRKERMPFDSNCITPGTEFMSRLSAALQH 158
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
Y+ RL+ DPGW ++VI SDA+VPGEGEHKI+D+IR R P++DPN +H L GADADL
Sbjct: 159 YVVLRLSEDPGWANLQVIFSDASVPGEGEHKILDFIRNARNGPNYDPNQRHVLYGADADL 218
Query: 238 IMLGLATHEPNFTIIRE 254
I+LGLATHEP ++RE
Sbjct: 219 ILLGLATHEPAIYVLRE 235
>gi|255715011|ref|XP_002553787.1| KLTH0E07062p [Lachancea thermotolerans]
gi|238935169|emb|CAR23350.1| KLTH0E07062p [Lachancea thermotolerans CBS 6340]
Length = 1496
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/385 (42%), Positives = 225/385 (58%), Gaps = 66/385 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q ++G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMI--------SQLIDGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF + P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTHANDDDVKKRMSEEEVFSKIFAYIDHLFHTIGPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + EK + DG +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------EKAIRDGEEIP----KGEPFDSNSITPGTEFMAKLTENLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W +ILS VPGEGEHKIM+YIR+ RAQPD++ NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSAWSSTSIILSGHEVPGEGEHKIMEYIRRMRAQPDYNANTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL+TH+P+F ++REE + +A P +
Sbjct: 211 MLGLSTHDPHFALLREEVTFGRRQKAAPLEYQN--------------------------- 243
Query: 296 VEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + +S+LREYLE E +L F Y FER LDD++ + F +GNDFLP+LP L +
Sbjct: 244 --FYLLHISMLREYLELEFREIADDLQFEYDFERILDDFILVMFVIGNDFLPNLPDLHLN 301
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQE 378
+GA L+ +K+ + T + ++
Sbjct: 302 KGAFPVLLQTFKEALKHTDGYINEQ 326
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
++D+YY K D + YV GL WVL YYY+GC+SW WY+ +HYAP SD
Sbjct: 510 WRDQYYREKLGFSYYDEDKLRELTETYVEGLQWVLFYYYRGCQSWSWYYKYHYAPRISDV 569
Query: 475 INIAEVDTNFETG 487
F G
Sbjct: 570 YKGLNQSIKFNLG 582
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 633 NKMKKRRERQMKMAAQSTKAPSFIPGG----QFAPQDSPIIDFYPEDFKIDLNGKKFAWQ 688
N K R Q MA ++ + IP + P+ SPI DFYP + ++D NGK W+
Sbjct: 580 NLGKPFRPFQQLMAVLPERSKNLIPTVYRPLMYDPK-SPIADFYPSEVELDKNGKTADWE 638
Query: 689 GVALLPFVDEERLHKALAPYYEKLSVEE 716
V L FVDE RL +A+APY EKL+ EE
Sbjct: 639 AVVKLSFVDENRLIEAMAPYDEKLTPEE 666
>gi|400601005|gb|EJP68673.1| XRN 5'-3' exonuclease [Beauveria bassiana ARSEF 2860]
Length = 1398
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/413 (41%), Positives = 237/413 (57%), Gaps = 74/413 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRAR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + EV + REK + +G +P E+ FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTA-------LEVEKAREKAIKEGVEMPKEEP----FDSNCITPGTEFMAKLSRQLQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR ++QP ++ N +HCL G DADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNSNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F+++REE +A + ++ H+
Sbjct: 211 IMLGLLSHDPHFSLLREEVTFGRASK-NKSKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLEKELA----MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYLE E +L F + ER +DD++ M FFVGNDFLP+LP L I
Sbjct: 247 FFLLHLCMVREYLEMEFQELKHQQDLGFEFDLERVIDDFILMAFFVGNDFLPNLPGLHIN 306
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGG----GGGRGVKRSFDDVDESSEEE 402
EGA+ + +YK+ + E GG G +KR+ + E S+ E
Sbjct: 307 EGALADMFEIYKRVL---------PEEGGYLHENGVLNIKRALRMIAELSKVE 350
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 388 VKRSFDD---VDESSEEEESNDEVRLWED---GFKDRYYESKFDVPK-DDIAF---RLMV 437
V R++D V++SSE + E +L+++ +K +YY KF P+ + A+ + +
Sbjct: 483 VIRTYDKAVVVNDSSEASQEEYE-KLYQEKYQAWKTKYYLQKF--PEWESTAYAEEQTNL 539
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GL WVL YYY+G SW W++ +HYAP SD + + FE G QP
Sbjct: 540 CENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISDVVKGSNAKLVFEKG-QP 591
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+ LS +E
Sbjct: 622 SSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNALLSDDE 673
>gi|212645611|ref|NP_496945.3| Protein XRN-1 [Caenorhabditis elegans]
gi|194680614|emb|CAC35856.3| Protein XRN-1 [Caenorhabditis elegans]
Length = 1591
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 224/372 (60%), Gaps = 49/372 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP C+ + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-----CLSEV---INESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D EDE+ V IF I+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++ ++A K L +G I+P E + FDSNCITPGT FM RL L +
Sbjct: 102 FMSARTAHTQLA-------KALENGEIMPSE----ARFDSNCITPGTYFMTRLHQKLDDW 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I + D W+G K+ILS NVPGEGEHKIMD+IR +RA +DPNT+HC+ G DADLI
Sbjct: 151 IKTKSATDSRWQGRKIILSGHNVPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F+++REE N RP + + K T +F
Sbjct: 211 MLGIVSHEPHFSLLREEVTFN-TRPRKNDNKATKKPKR--------------TDSDVKKF 255
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYL E A +LPF Y ER +DDW+ + VGNDFLPHLP++ I + A
Sbjct: 256 HLLHLSLLREYLAWEFADVKDSLPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHIHDDA 315
Query: 357 VDRLVNLYKKTV 368
+ L + YKK +
Sbjct: 316 LPLLYSTYKKVL 327
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
P SPI DFYP +F+ DLNGK+ W+ V L+PF++E+RL +A+ +L+ EE+
Sbjct: 600 PAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEEN 654
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 404 SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHE-------YVLGLCWVLKYYYQGC 456
+ND W +++ K D + ++ + + YV + W L YYY GC
Sbjct: 477 ANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYYYHGC 536
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW W++P HYAPF SD + FE
Sbjct: 537 VSWSWFYPHHYAPFISDVRGFVGMRMEFE 565
>gi|405973506|gb|EKC38214.1| 5'-3' exoribonuclease 1 [Crassostrea gigas]
Length = 1857
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/368 (46%), Positives = 225/368 (61%), Gaps = 56/368 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWVSERYP-----CLSETVKEY---QIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPED-KPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HPED P + E+++ IF ++ LFR+++PRK+ +MAIDGVAPRAKMNQQR RR
Sbjct: 42 VCSHPEDDNPHFRITEEKIFKDIFHYLEFLFRMIKPRKVFFMAIDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E AE + AR G LP EK FDSNCITPGT FM +L L Y+
Sbjct: 102 FRSARE-AEALERKAR------ESGETLPTEK----RFDSNCITPGTEFMVKLHEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ ++++DP W G+ V LS PGEGEHK+MD+IR Q+++PD+D NT+HCL G DADL+
Sbjct: 151 VTSKISSDPLWHGVDVYLSGHETPGEGEHKVMDFIRCQKSKPDYDANTRHCLYGLDADLM 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGLATHEP+F+++REE + G+ + PE E F
Sbjct: 211 MLGLATHEPHFSLLREEVR--------FGGKKDRNKRPAT-------PE-------ETTF 248
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+ REYL+ E + LPF YS E +DDW+ M F VGNDF+PHLP L I+ A
Sbjct: 249 HLLHLSLFREYLDFEFSFLKDKLPFGYSLENIIDDWILMGFLVGNDFIPHLPHLHIQHDA 308
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 309 LPLLWKTY 316
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
K YY +K + D EYV + W+L YY++G SW W++P HYAPF SD
Sbjct: 441 KRNYYMTKLEYEDVDKQVLRDQCEEYVRAIQWILLYYFEGVPSWSWFYPHHYAPFISDVT 500
Query: 476 NIAEVDTNFETGT 488
+ +++ FE G+
Sbjct: 501 DFKDMEIKFEMGS 513
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+IDFYP DF+ DLNGK+ W+ V L+PF+DE RL +A+ +LS E
Sbjct: 546 SPVIDFYPVDFQTDLNGKQQEWEAVVLIPFIDEARLLEAMKSVENQLSPSE 596
>gi|115437844|ref|XP_001217914.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
gi|114188729|gb|EAU30429.1| hypothetical protein ATEG_09292 [Aspergillus terreus NIH2624]
Length = 1413
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/387 (44%), Positives = 234/387 (60%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEVA+ EK +A G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AEVAK--EKAIAQGVEMPKE----DAFDSNCITPGTEFMAKLTEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFCLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + LS++REYLE E L FP+ ER +DD++ M FFVGNDF
Sbjct: 236 KKPKELEHQNFYLLHLSMVREYLELEFQELEQEGALKFPFDMERVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+ + K
Sbjct: 296 LPNLPNLHINEGALALMFKIYKEILPK 322
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +D+ V E S EE + +E+ F KD+YY SKFD ++ + YV
Sbjct: 476 VIRKYDNAKVQEVSAEEAQKAAEKKYEEKFQEWKDKYYTSKFDWGLENAEEMRKLTENYV 535
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GL WVL YYY+G SW W+F +HYAP SD + D NF G
Sbjct: 536 QGLQWVLFYYYRGIASWPWFFGYHYAPMISDVKKGLKADMNFRLG 580
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL AL
Sbjct: 613 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAL 653
>gi|330916279|ref|XP_003297360.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
gi|311330012|gb|EFQ94550.1| hypothetical protein PTT_07733 [Pyrenophora teres f. teres 0-1]
Length = 1394
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/387 (43%), Positives = 235/387 (60%), Gaps = 66/387 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP + Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A K ED+M ++IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + +T + REK + +G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALDTE-------KAREKAIREGVEMPTEEA----FDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHK+M+YIR+ +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F+++REE + +QA+ ++ Q
Sbjct: 211 MLGLLSHDPHFSLLREEVTFGRQSQAKSKELEHQ-------------------------- 244
Query: 296 VEFIFVRLSVLREYLEKELAMPNLP----FPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
F + L ++REYLE E P FP+ ER +DD++ M FFVGNDFLP+LP L
Sbjct: 245 -NFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFLPNLPHLH 303
Query: 352 IREGAVDRLVNLYKKTVYKTQEQLRQE 378
I EGA+ + N+YK + K + + +E
Sbjct: 304 INEGALALMFNVYKTVLPKGKGYINEE 330
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 395 VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
VD S E+ +S + + E + +K+ YY+SKF+ + + + YV GL WVL YY
Sbjct: 490 VDVSPEDAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRRLTENYVQGLQWVLYYY 549
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
Y+G SW WY+ +HY+P SD + D NF+ G QP
Sbjct: 550 YRGVASWPWYYQYHYSPMISDVKRGLKADINFKLG-QP 586
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQF---APQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q M ++ S +P + +DSPIIDFYP DF +D+NGKK W+ V +PF+ E
Sbjct: 591 QQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQE 650
Query: 699 ERLHKALAPYYEKLSVEE 716
+RL KA+A + L+ +E
Sbjct: 651 DRLLKAMATKEQDLTPDE 668
>gi|116199173|ref|XP_001225398.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
gi|88179021|gb|EAQ86489.1| hypothetical protein CHGG_07742 [Chaetomium globosum CBS 148.51]
Length = 1420
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 244/422 (57%), Gaps = 71/422 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH +D E+EM +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDVQFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + E AEK R+K + +G LP E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALE-AEKA------RDKAIKEGKELPKEEP----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+ +++LS VPGEGEHKIM+YIR RAQP+++PN +HCL G DADLI
Sbjct: 151 INKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPEYNPNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q H+ KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQAKHKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLE-------KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ L ++REYLE KE AM FP+ E+ +DD++ M FFVGNDFLP+LP L
Sbjct: 247 YLMHLCIVREYLELEFQDLKKEGAM---SFPFDMEKVIDDFILMAFFVGNDFLPNLPHLH 303
Query: 352 IREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSE---EEESNDEV 408
I EGA+ + +YK + K + ENG + + R D++ + E E+ DE
Sbjct: 304 INEGALATMFRIYKSVLPKCDGYIN--ENGKVNLQRLSRLLDELGKEEYRFFEHENEDES 361
Query: 409 RL 410
L
Sbjct: 362 WL 363
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 415 FKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+KD YY+ KF+ P + + YV GL WVL YYY+G SW W++ +HY+P S
Sbjct: 504 WKDEYYDQKFEDWTPDNREEELRKLTENYVQGLQWVLYYYYRGIASWPWFYAYHYSPMIS 563
Query: 473 DFINIAEVDTNFETGTQPVNNNRILKFIL 501
D + D NF+ G QP N L +L
Sbjct: 564 DVVKGLNADLNFKLG-QPFRPNEQLMGVL 591
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
SPIIDFYP DF++D+NGKK W+ V +PF++E+RL A+AP
Sbjct: 612 SPIIDFYPRDFELDMNGKKMDWEAVIKIPFIEEKRLLSAMAP 653
>gi|396497754|ref|XP_003845052.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
gi|312221633|emb|CBY01573.1| similar to 5'-3' exoribonuclease [Leptosphaeria maculans JN3]
Length = 1425
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/394 (43%), Positives = 236/394 (59%), Gaps = 80/394 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP + E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPGISQLIAENR--------IP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH ++ K ED+M ++IF I+ LF ++P++L++MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHNDNDSVTTRKSEDKMFISIFNYIEHLFGKIKPKQLIFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEK REK + +G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-AEKA------REKAIREGVEMPTEEA----FDSNCITPGTAFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQPD+DPN +HCL G DADLI
Sbjct: 151 INKKISEDLDWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F+++REE +TFG + +
Sbjct: 211 MLGLLSHDPHFSLLREE----------------------------------VTFGRQSQT 236
Query: 298 ---------FIFVRLSVLREYLEKELAMPNLP----FPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE E P FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KSKELEHQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
P+LP L I EGA+ + N+YK + K + + +E
Sbjct: 297 PNLPHLHINEGALALMFNVYKTVLPKAKGYINEE 330
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 395 VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
VD S +E ++ + + E D +K+ YY+SKFD + + + YV GL WVL YY
Sbjct: 490 VDISPDEAQAAMQKKYDEKFDAWKNDYYKSKFDWDRSNEEELRKLTENYVQGLQWVLYYY 549
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
Y+G SW WY+ +HY+P SD + D NF+ G
Sbjct: 550 YRGVASWPWYYGYHYSPMISDVKRGLKADINFKLG 584
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQ---FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q M ++ S +P +DSPIIDFYP DF +D+NGKK W+ V +PF+ E
Sbjct: 591 QQLMGVLPDRSKSIVPEAYHPLMTSEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQE 650
Query: 699 ERLHKALAPYYEKLSVEE 716
+RL A+A L+ +E
Sbjct: 651 DRLLSAMATKEHNLTADE 668
>gi|402585499|gb|EJW79439.1| single-stranded RNA 5'-3' exonuclease [Wuchereria bancrofti]
Length = 446
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 250/443 (56%), Gaps = 66/443 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + Q+ ++IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVQD---EQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D+ E+++ IF ID LF I++P+K+ +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 GCSHPDDEDISFRISEEQIFRDIFNYIDFLFGIIKPKKVFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F ++K E ++ + R+K G +P EK FDSNCITPGT FMARL L Y+
Sbjct: 102 FMSAKNAREALS---KARKK----GIKIPDEKP----FDSNCITPGTEFMARLHEQLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ ++ D W+G+++ LS N PGEGEHKIMD+IR +R++ D+D NT+HCL G DADLI
Sbjct: 151 VQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F ++REE K + Q K +D E+ F
Sbjct: 211 MLGICSHEPHFALLREEVKFGR--------QKNRNGKHRTSVD-------------EITF 249
Query: 299 IFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREYL E LPF Y E +DDWV M F +GNDF+PHLP + I E A
Sbjct: 250 HLLHLSLLREYLSWEFYPLKEKLPFDYDLESVIDDWVLMGFLIGNDFIPHLPHVHIHEDA 309
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKR------SFDDVDESSEEEESNDEVRL 410
+ L Y + + + + + G +KR +F D + E+ +DE L
Sbjct: 310 LPLLYATYNEVLPQLDGYINE-----AGILNLKRFEIFLKNFAKNDRKNFIEQMDDEAYL 364
Query: 411 WEDGFKDRYYESKFDVPKDDIAF 433
+ + +S F D+ +F
Sbjct: 365 SSKRTSNAWRKSAFTSNNDEQSF 387
>gi|358392275|gb|EHK41679.1| hypothetical protein TRIATDRAFT_228664 [Trichoderma atroviride IMI
206040]
Length = 1391
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/373 (44%), Positives = 222/373 (59%), Gaps = 61/373 (16%)
Query: 3 VPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPC 62
VP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH C
Sbjct: 9 VPKFFRWLSERYPAI--------SQVIAENRIP-----------EFDCLYLDMNGIIHNC 49
Query: 63 THP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
TH ED E+EM + IF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RRF
Sbjct: 50 THKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARRF 109
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + +V + R+K + +G LP E+ FDSNCITPGT FMA+LS L Y++
Sbjct: 110 RTA-------LDVEKARDKAIREGVELPKEEP----FDSNCITPGTEFMAKLSQQLRYFV 158
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+ +++ D W+G V+LS VPGEGEHKIM+YIR +AQP++DPN +HCL G DADLIM
Sbjct: 159 NKKISEDTDWQGCDVVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNVRHCLYGLDADLIM 218
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGL +H+P+F ++REE +A ++ H+ F
Sbjct: 219 LGLLSHDPHFCLLREEVTFGRASKTK-SKELEHQ-----------------------NFY 254
Query: 300 FVRLSVLREYLEKELA-MPN---LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ L ++REYLE E + N L F + ER +DD++ M FFVGNDFLP+LP L I EG
Sbjct: 255 LLHLCIVREYLEMEFQELQNKGALKFQFDLERVIDDFILMAFFVGNDFLPNLPGLHINEG 314
Query: 356 AVDRLVNLYKKTV 368
A+ + +YK +
Sbjct: 315 ALANMFRIYKSVL 327
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS 713
+SPIIDFYP DF++D+NGKK W+ V +PF+DE RL A+AP E LS
Sbjct: 590 NSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEARLLAAMAPQNELLS 638
>gi|444322153|ref|XP_004181732.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
gi|387514777|emb|CCH62213.1| hypothetical protein TBLA_0G02750 [Tetrapisispora blattae CBS 6284]
Length = 1546
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 222/374 (59%), Gaps = 61/374 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGNQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAP----KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
CTH D + E+E+ IF ID LF ++P++ YMAIDGVAPRAKMNQQR+
Sbjct: 42 TCTHSNDDSSDITKRLSEEEVFAKIFTYIDHLFMTIKPKQTFYMAIDGVAPRAKMNQQRA 101
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L
Sbjct: 102 RRFRTAMDAEKAL-------QKAIEEGTEIP----KGEPFDSNSITPGTEFMAKLTKNLK 150
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+IHD+++ND W+ ++++ S VPGEGEHKIMDYIR R+Q ++PNT+HC+ G DAD
Sbjct: 151 YFIHDKISNDSNWRNVEIVFSGHEVPGEGEHKIMDYIRTIRSQEGYNPNTRHCIYGLDAD 210
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LI+LGL+TH P+F ++REE K G + L+ +
Sbjct: 211 LIILGLSTHAPHFALLREEVK------------FGRRSGQTPALENQ------------- 245
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS+LREYLE E L F Y+FER LDD++ + F +GNDFLP+LP L + +
Sbjct: 246 NFFLLHLSLLREYLELEFENIADELQFEYNFERVLDDFILILFVIGNDFLPNLPDLHLNK 305
Query: 355 GAVDRLVNLYKKTV 368
GA L+ +K+ +
Sbjct: 306 GAFPVLLQTFKEAL 319
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 400 EEEESNDEVRLWEDGFK---DRYYESK--FDVPKDDIAFRLM-VGHEYVLGLCWVLKYYY 453
++ E + E +++ED FK + YY+ K F D+ +L + +YV GL WVL YYY
Sbjct: 523 DQSELDREQQVYEDRFKKWKNEYYKDKLQFTTNTDEGKQQLKKLSCDYVEGLQWVLFYYY 582
Query: 454 QGCRSWKWYFPFHYAPFASDFI 475
+GC+SW WY+P HY+P SD I
Sbjct: 583 KGCQSWSWYYPHHYSPRISDLI 604
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S IIDFYP + K+D NGK W+ V LL F+DE+RL A+ PY KLS EE
Sbjct: 648 ENSKIIDFYPHEVKLDKNGKTAEWEAVVLLSFIDEKRLIDAMEPYLSKLSPEE 700
>gi|403163584|ref|XP_003323653.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164365|gb|EFP79234.2| hypothetical protein PGTG_05555 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1452
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 226/375 (60%), Gaps = 59/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV FFRW+S +YP V+ Q V +IP +FDNLYLDMNGIIH
Sbjct: 1 MGVSKFFRWMSERYPFVL--------QLVEENRIP-----------QFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP + A E+++ +AIF ++ LF + +P+K+ ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 HCSHPNEGSAHFRITEEDIYLAIFSYLEHLFALAKPQKVFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F+ +KE E I + R EKL + FDSNCITPGTPFMARLS L Y+
Sbjct: 102 FKTAKENQELIEKAIRRGEKL-----------PDSTGFDSNCITPGTPFMARLSEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+ ++VI S +VPGEGEHKIM+YIR +AQ D++PN +HC+ G DADLI
Sbjct: 151 INKKVSEDSAWQSVQVIFSGHDVPGEGEHKIMEYIRLSKAQEDYNPNIRHCVYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE K + GL+ + F
Sbjct: 211 MLGLLSHDPHFCLLREEVK------------FSAQKSSSKGLENQ-------------RF 245
Query: 299 IFVRLSVLREYLEKELAMPNL--PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ +S++R+YL+ E A Y ER +DD++ +C FVGNDFLPHLP+L I EGA
Sbjct: 246 YLLHISLVRDYLDWEFASLRKVKDLEYDLERIIDDFILLCIFVGNDFLPHLPNLHINEGA 305
Query: 357 VDRLVNLYKKTVYKT 371
+ L ++YK+ + K
Sbjct: 306 LGLLFDIYKRVLPKA 320
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
D+ +E+E + L E +K +YY K ++ + + + Y GL WVL YYY G
Sbjct: 510 DDFDQEQEQKFQKALSE--WKSQYYHEKMNLDFANPDQLHELTYAYTEGLQWVLHYYYDG 567
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++P+HY+P SD N+A +F G
Sbjct: 568 VASWSWFYPYHYSPMISDLSNVAPYKFSFNLG 599
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIID YP F+ DLNGKK W+ + +PF+D++RL KA+ + KL EE
Sbjct: 632 ESPIIDLYPRQFETDLNGKKHDWEAIVKIPFIDQDRLLKAMKAHEHKLLDEE 683
>gi|350402247|ref|XP_003486419.1| PREDICTED: 5'-3' exoribonuclease 1-like [Bombus impatiens]
Length = 1628
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 225/372 (60%), Gaps = 64/372 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP C+ +K ++ +IP EFDNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYISERYP-----CLTEKLKDY---QIP-----------EFDNLYLDVNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D E+ + IF I+ LFR+++P+KL ++A+DGVAPRAK+NQQRSRR
Sbjct: 42 DCSHPDDTDITFRISEETIFKNIFRYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRR 101
Query: 119 FRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
F+ +K+ A+I+E K G ILP EK FDSNCITPGT FM++L L Y
Sbjct: 102 FKTAKD--------AKIQEDKAKVKGTILPKEKR----FDSNCITPGTVFMSKLDEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+ KVI S + VPGEGEHKIMDYIR + Q ++D NT+HCL G DADL
Sbjct: 150 FITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
IMLGL THE +FT++REE F Q + C PE E
Sbjct: 210 IMLGLCTHEIHFTLLREELTFGKKQKKVC-------------------LTPE-------E 243
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+F LS+LREY+ E + LPFPY+ E +DDW+ M F +GNDF+PHLP+L I
Sbjct: 244 TKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHIV 303
Query: 354 EGAVDRLVNLYK 365
GA+ L +YK
Sbjct: 304 HGALSVLYQVYK 315
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
K YY +K D F YV + W L YYY GC SW WY+P HYAP+ SD
Sbjct: 435 KKDYYINKLKYENIDENFLRSQAEGYVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIK 494
Query: 476 NIAEVDTNFETG 487
+ ++ F+ G
Sbjct: 495 DFKDLKLEFDLG 506
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPII +YP +F+ DLNGK+ W+ V L+PF++E+ + A+AP Y +++ EE
Sbjct: 540 SPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMAPRYPQITPEE 590
>gi|261332676|emb|CBH15671.1| 5'-3' exoribonuclease 2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 801
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 277/563 (49%), Gaps = 119/563 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME---FDNLYLDMNG 57
MG+ F+ WL R Y S C+ED PQ V + SS P M+ FDNLYLD+NG
Sbjct: 1 MGIAGFYLWLKRWYAS----CMEDVPQCV--VEAASKSSPPPKEYMQSHKFDNLYLDLNG 54
Query: 58 IIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
++HPC H + +E M +F ID +F++VRPRK L + +DGVAP++KMNQQRS
Sbjct: 55 LVHPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRS 114
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRA++E AE A+ + LL G P +E+ +D N ITP TPFM RL +
Sbjct: 115 RRFRAAEERAEGEVMSAKCADVLLEKGLPYPKVRER---WDHNVITPSTPFMERLGLAIE 171
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
+++ ++N DP WK + V+ SDA+VPGEGEHKIM YIR R QP +DP+T H + G DAD
Sbjct: 172 WFVVKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDAD 231
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF-GSE 295
LI LGL+THE + TI+R + TF +
Sbjct: 232 LISLGLSTHEKSVTILRNQLNE--------------------------------TFNAAH 259
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+F + L RE L+++ SFER +DD++F+CFFVGNDFLPH+P + I+
Sbjct: 260 GKFCYFSLVKFRECLKRDFDGIK---EMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 356 AV----DRLVNLYKKTVYKTQ---------------------EQLRQEENGG----GGGR 386
V D VN + Y T LR E + G GR
Sbjct: 317 GVELLLDHYVNEFASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKERGR 376
Query: 387 G------------VKRSFDDV--DESSEEEESNDEVRLWEDGFK---------------- 416
G +K+ V D+++ +E S+ +L K
Sbjct: 377 GNVAERVNKYQVELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTY 436
Query: 417 ------DRYYESKFDV-PKDDIAFRLMVGH---EYVLGLCWVLKYYYQGCRSWKWYFPFH 466
D+YY+ KF P+ F V EY+ G WV++YY GC SW W++P+H
Sbjct: 437 HDEDYRDKYYQKKFGWDPEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYH 496
Query: 467 YAPFASDFINIAE-VDTNFETGT 488
YAP D + VD FE GT
Sbjct: 497 YAPLLDDLARFTDSVDVEFERGT 519
>gi|71747618|ref|XP_822864.1| 5'-3' exoribonuclease XRND [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832532|gb|EAN78036.1| 5'-3' exoribonuclease XRND, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 801
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 203/563 (36%), Positives = 277/563 (49%), Gaps = 119/563 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME---FDNLYLDMNG 57
MG+ F+ WL R Y S C+ED PQ V + SS P M+ FDNLYLD+NG
Sbjct: 1 MGIAGFYLWLKRWYAS----CMEDVPQCV--VEAASKSSPPPKEYMQSHKFDNLYLDLNG 54
Query: 58 IIHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
++HPC H + +E M +F ID +F++VRPRK L + +DGVAP++KMNQQRS
Sbjct: 55 LVHPCCHDTSPLPEPESEEEMFERVFTQIDLVFKVVRPRKCLILCVDGVAPQSKMNQQRS 114
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFRA++E AE A+ + LL G P +E+ +D N ITP TPFM RL +
Sbjct: 115 RRFRAAEERAEGEVMSAKCADVLLEKGLPYPKVRER---WDHNVITPSTPFMERLGLAIE 171
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
+++ ++N DP WK + V+ SDA+VPGEGEHKIM YIR R QP +DP+T H + G DAD
Sbjct: 172 WFVVKKVNEDPLWKKVAVVFSDAHVPGEGEHKIMQYIRGLRMQPGYDPDTSHVIYGMDAD 231
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF-GSE 295
LI LGL+THE + TI+R + TF +
Sbjct: 232 LISLGLSTHEKSVTILRNQLNE--------------------------------TFNAAH 259
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+F + L RE L+++ SFER +DD++F+CFFVGNDFLPH+P + I+
Sbjct: 260 GKFCYFSLVKFRECLKRDFDGIK---EMSFERVVDDFIFLCFFVGNDFLPHVPLISIKTR 316
Query: 356 AV----DRLVNLYKKTVYKTQ---------------------EQLRQEENGG----GGGR 386
V D VN + Y T LR E + G GR
Sbjct: 317 GVELLLDHYVNEFASHSYLTDGGEVRFKALSSFLARFLNDYGSVLRDESSFGERAKERGR 376
Query: 387 G------------VKRSFDDV--DESSEEEESNDEVRLWEDGFK---------------- 416
G +K+ V D+++ +E S+ +L K
Sbjct: 377 GNVAERVNKYQVELKKVLASVKRDKTNAQEVSDTAHKLMVSALKERVSFVGDKGSLGFTY 436
Query: 417 ------DRYYESKFDV-PKDDIAFRLMVGH---EYVLGLCWVLKYYYQGCRSWKWYFPFH 466
D+YY+ KF P+ F V EY+ G WV++YY GC SW W++P+H
Sbjct: 437 HDEDYRDKYYQKKFGWDPEKRSKFEKRVKRCCAEYLRGTQWVMRYYTSGCPSWNWFYPYH 496
Query: 467 YAPFASDFINIAE-VDTNFETGT 488
YAP D + VD FE GT
Sbjct: 497 YAPLLDDLARFTDSVDVEFERGT 519
>gi|281361106|ref|NP_001162796.1| pacman, isoform B [Drosophila melanogaster]
gi|272506169|gb|ACZ95330.1| pacman, isoform B [Drosophila melanogaster]
Length = 1613
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 116/545 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HCIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E+++ IF +D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E ++ A+ A+ R +L + FDSNCITPGT FM RL L +
Sbjct: 102 FRTAREAEQQEAKAAQ-RGEL-----------REHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR + QPD+DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFM-------------CFFVGNDFL 344
+ L +LREYLE E A+ + +DDWV M C + ++ L
Sbjct: 244 FLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNAL 303
Query: 345 PHL--------PSL--EIRE-GAVD-RLVNLYKKTVYKTQ-EQLRQEENGGGGGRGVKRS 391
P L P+L I E G ++ R + ++ + + + + ++ + +
Sbjct: 304 PLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNNKSEA 363
Query: 392 FD-DVDESSEEEESNDE-------------------------VRLWE-DGFKDRYYESKF 424
FD DV E +E + + + V L E +K +Y +KF
Sbjct: 364 FDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKF 423
Query: 425 DV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
P D++ L H YV L WVL YYY+G +SW WY+PFHY PF SD NI +V+
Sbjct: 424 KRDPNDELIEELC--HHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEIA 481
Query: 484 FETGT 488
F GT
Sbjct: 482 FHMGT 486
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYP +F+ DLNGKK W+ V L+PF+DE RL A+ P +LS+EE E
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERE 571
>gi|346325316|gb|EGX94913.1| exonuclease Kem1, putative [Cordyceps militaris CM01]
Length = 1394
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 222/375 (59%), Gaps = 61/375 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPPI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH ED E+EM + IF I+ LF ++PR+L +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTHKDAGEDTTFRLSEEEMFIRIFNYIEHLFGKIKPRQLFFMAIDGVAPRAKMNQQRAR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + EV REK + +G +P E+ FDSNCITPGT FMA+LS L Y
Sbjct: 102 RFRTA-------LEVEMAREKAIKEGVEMPKEEP----FDSNCITPGTAFMAKLSRQLQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+++ +++ D W+G +++LS VPGEGEHKIM+YIR ++QP ++PN +HCL G DADL
Sbjct: 151 FVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKSQPGYNPNVRHCLYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F+++REE +A + ++ H+
Sbjct: 211 IMLGLLSHDPHFSLLREEVTFGRASK-NKSKELEHQ-----------------------N 246
Query: 298 FIFVRLSVLREYLEKEL----AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + L ++REYLE E + + ER +DD++ M FFVGNDFLP+LP L I
Sbjct: 247 FFLLHLCMVREYLEMEFQELKQTQDSGLEFDLERVIDDFILMAFFVGNDFLPNLPGLHIN 306
Query: 354 EGAVDRLVNLYKKTV 368
EGA+ + +YK+ +
Sbjct: 307 EGALADMFEIYKRIL 321
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 14/113 (12%)
Query: 388 VKRSFDD---VDESSEEEESNDEVRLWED---GFKDRYYESKFDVPK-DDIAF---RLMV 437
V R++D VD+SS E +L+E G+K +YY KF P+ + A+ + +
Sbjct: 481 VIRTYDKAVVVDDSSGASPEKYE-KLYEQKYQGWKTKYYLQKF--PEWESTAYADEQTAL 537
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GL WVL YYY+G SW W++ +HYAP SD A FE G QP
Sbjct: 538 CENYVEGLQWVLFYYYRGIASWPWFYKYHYAPLISDVAKGANAKLLFEKG-QP 589
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+ LS EE
Sbjct: 621 SPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMETKNVLLSDEE 671
>gi|24643245|ref|NP_523408.2| pacman, isoform A [Drosophila melanogaster]
gi|7293586|gb|AAF48958.1| pacman, isoform A [Drosophila melanogaster]
gi|15291661|gb|AAK93099.1| LD22664p [Drosophila melanogaster]
Length = 1612
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 116/545 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HCIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E+++ IF +D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E ++ A+ A+ R +L + FDSNCITPGT FM RL L +
Sbjct: 102 FRTAREAEQQEAKAAQ-RGEL-----------REHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR + QPD+DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFM-------------CFFVGNDFL 344
+ L +LREYLE E A+ + +DDWV M C + ++ L
Sbjct: 244 FLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNAL 303
Query: 345 PHL--------PSL--EIRE-GAVD-RLVNLYKKTVYKTQ-EQLRQEENGGGGGRGVKRS 391
P L P+L I E G ++ R + ++ + + + + ++ + +
Sbjct: 304 PLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNNKSEA 363
Query: 392 FD-DVDESSEEEESNDE-------------------------VRLWE-DGFKDRYYESKF 424
FD DV E +E + + + V L E +K +Y +KF
Sbjct: 364 FDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKF 423
Query: 425 DV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
P D++ L H YV L WVL YYY+G +SW WY+PFHY PF SD NI +V+
Sbjct: 424 KRDPNDELIEELC--HHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEIA 481
Query: 484 FETGT 488
F GT
Sbjct: 482 FHMGT 486
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYP +F+ DLNGKK W+ V L+PF+DE RL A+ P +LS+EE E
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERE 571
>gi|407409729|gb|EKF32447.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi marinkellei]
Length = 807
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 210/557 (37%), Positives = 277/557 (49%), Gaps = 132/557 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ F+ WL R Y CVED P+EV NGQ +P S FDN YLDM
Sbjct: 1 MGIAGFYLWLQRWYGD----CVEDVPEEVVKAALNGQPLPVSSDATQ----RFDNFYLDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P+ E+EM IF +D L++IVRPRK L + IDGVAP++KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPETEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA++E E A+ E ++ G LPP + + S +D N ITP TPFM R+
Sbjct: 113 RSRRFRAAEERIEGEVFSAQCAEDVVKKG--LPPPQTR-SRWDHNVITPSTPFMERVGLA 169
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
+ ++I ++N DP W+ I VI SDA+VPGEGEHKIM YIR+ R Q ++P T H + G D
Sbjct: 170 IEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRVQLGYNPQTSHVIHGMD 229
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + TI+R E F+P+ R
Sbjct: 230 ADLICLGLSTHEEHVTILRNQLTETFQPDHNR---------------------------- 261
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L R L + FER LDD+VF+CFFVGNDFLPH+P +
Sbjct: 262 -------FCYFSLYKYRLRLRDDFGGIG---QMDFERVLDDFVFLCFFVGNDFLPHVPLI 311
Query: 351 EIREGAVDRLVNLY----KKTVYKTQ---------------------EQLRQEENGGGGG 385
I+ ++ L++ Y K Y T E+L+QE GG
Sbjct: 312 SIKTKGIELLLDHYVRGFKDHSYLTHGGEVNYGNLTKFLRFFVVGYMEKLKQEY--GGVL 369
Query: 386 RGVKRSFDDVDE--------------SSEEEESN-----------------DEVRLWED- 413
R +R+ V+E S +++ N + RL D
Sbjct: 370 RAKQRAKAKVEERVKELEQELEEQLNSLQKDRKNAQHVSNAAHKLLLSIMKERARLVVDK 429
Query: 414 ---GF-------KDRYYESKFDV-PKDDIAFR---LMVGHEYVLGLCWVLKYYYQGCRSW 459
GF +D+YYE KF P D AF + EY+ G WV++YY GC SW
Sbjct: 430 EPLGFSYVNDDHRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSW 489
Query: 460 KWYFPFHYAPFASDFIN 476
WY+PF+YAP D +
Sbjct: 490 DWYYPFYYAPLLQDLAH 506
>gi|157111508|ref|XP_001651597.1| 5'-3' exoribonuclease, putative [Aedes aegypti]
gi|108868328|gb|EAT32553.1| AAEL015316-PA, partial [Aedes aegypti]
Length = 188
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/185 (82%), Positives = 164/185 (88%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWLSRKYPSVIV CVE K + +G + D ++PNPN +EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLSRKYPSVIVECVEQKQTDEHGNPLYDDMTQPNPNKVEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKPAPKDEDEMMVAIFECIDRL IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLMNIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
ASKE AEK AEV +IR++L A GCILPPEKEKG+HFDSNCITPGTPFM RLS CL YY+H
Sbjct: 121 ASKEAAEKAAEVQKIRDELRAKGCILPPEKEKGAHFDSNCITPGTPFMDRLSKCLQYYVH 180
Query: 181 DRLNN 185
DR+NN
Sbjct: 181 DRMNN 185
>gi|336262386|ref|XP_003345977.1| hypothetical protein SMAC_06532 [Sordaria macrospora k-hell]
gi|380089569|emb|CCC12451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1428
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/374 (45%), Positives = 228/374 (60%), Gaps = 59/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D E+EM +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + R+K + +G LP E+ FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTALDNE-------KARDKAIREGKELPKEEP----FDSNCITPGTEFMAKLSQQLRYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+ +++LS VPGEGEHKIM+YIR RAQPD+ N +HCL G DADLI
Sbjct: 151 INKKVSEDKDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSANVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + G H+ K GL+ E F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGR-------GPAKHKTK---GLE-------------EQNF 247
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE ++L P + FP+ E+ +DD++ M FFVGNDFLP+LP L I E
Sbjct: 248 YLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLPRLHINE 307
Query: 355 GAVDRLVNLYKKTV 368
GA+ + +YK+ +
Sbjct: 308 GALSLMFRIYKEIL 321
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 415 FKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+KD+YY KF+ P++ + YV GL WVL YYY+G SW W++ +HYAP S
Sbjct: 505 WKDKYYAEKFEEWTPENKEEELRHLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPMIS 564
Query: 473 DFINIAEVDTNFETGTQP 490
D + + D NF+ G QP
Sbjct: 565 DVVKGLKADLNFKMG-QP 581
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS-VEES 717
DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+ P E LS VE+S
Sbjct: 612 DSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKS 665
>gi|4914494|emb|CAB43711.1| pacman protein [Drosophila melanogaster]
Length = 1613
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/545 (36%), Positives = 280/545 (51%), Gaps = 116/545 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HCIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E+++ IF +D+LF +++P++L ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEEQIFQEIFNYVDKLFYLIKPQRLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E ++ A+ A+ R +L + FDSNCITPGT FM RL L +
Sbjct: 102 FRTAREAEQQEAKAAQ-RGEL-----------REHERFDSNCITPGTEFMVRLQEGLRAF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ VILS PGEGEHKIMDYIR + QPD+DPNT+HCL G DADLI
Sbjct: 150 LKTKISTDPLWQRCTVILSGQEAPGEGEHKIMDYIRYMKTQPDYDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K T E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKR--------------TSVEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFM-------------CFFVGNDFL 344
+ L +LREYLE E A+ + +DDWV M C + ++ L
Sbjct: 244 FLLHLGLLREYLELEFDALRTDEHKLDIAQLIDDWVLMGFLVGNDFIPHLPCLHISSNAL 303
Query: 345 PHL--------PSL--EIRE-GAVD-RLVNLYKKTVYKTQ-EQLRQEENGGGGGRGVKRS 391
P L P+L I E G ++ R + ++ + + + + ++ + +
Sbjct: 304 PLLYRTYIGIYPTLGGNINENGKLNLRRLQIFISALTEVELDHFKEHADDLKYMNNKSEA 363
Query: 392 FD-DVDESSEEEESNDE-------------------------VRLWE-DGFKDRYYESKF 424
FD DV E +E + + + V L E +K +Y +KF
Sbjct: 364 FDMDVGEITESQNLDSDLGALINKSMLLYDDDSEEDCSDENAVLLKEFQNYKRNFYRNKF 423
Query: 425 DV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTN 483
P D++ L H YV L WVL YYY+G +SW WY+PFHY PF SD NI +V+
Sbjct: 424 KRDPNDELIEELC--HHYVNALQWVLDYYYRGVQSWDWYYPFHYTPFISDLKNIEQVEIA 481
Query: 484 FETGT 488
F GT
Sbjct: 482 FHMGT 486
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SP+ +FYP +F+ DLNGKK W+ V L+PF+DE RL A+ P +LS+EE E
Sbjct: 519 SPLAEFYPLEFESDLNGKKHDWEAVVLIPFIDEGRLLAAMLPCEAQLSLEERE 571
>gi|358371673|dbj|GAA88280.1| exonuclease Kem1 [Aspergillus kawachii IFO 4308]
Length = 1405
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 236/387 (60%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE A+ EK +A G +P E+ FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AETAK--EKAIAQGIEMPKEEA----FDSNCITPGTEFMAKLTEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F+++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFSLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYLE E L FP+ E+ +DD++ M FFVGNDF
Sbjct: 236 KKSKELEHQNFFLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+++ K
Sbjct: 296 LPNLPNLHINEGALAFMFKIYKESLPK 322
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
+ R +D+ V E S EE + +E F K+ YY KF D + YV
Sbjct: 473 IIRRYDNAKVQELSPEEAQQAAEKKYEAKFQEWKNNYYVGKFGWGLDSHEEMRELTENYV 532
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GL WVL YYY+G SW W+F +HYAP SD DTNF G
Sbjct: 533 QGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLG 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++E RL ALA L+ EE
Sbjct: 610 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEE 661
>gi|389635811|ref|XP_003715558.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|351647891|gb|EHA55751.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae 70-15]
gi|440470232|gb|ELQ39313.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae Y34]
gi|440485056|gb|ELQ65052.1| 5'-3' exoribonuclease 1 [Magnaporthe oryzae P131]
Length = 1435
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/376 (45%), Positives = 226/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D EDEM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTHDTSFRLSEDEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVAR +K + +G LP E+ FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTALD-----AEVAR--DKAVREGQELPKEEP----FDSNCITPGTEFMAKLSEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQPD++ N +HCL G DADLI
Sbjct: 151 VNKKVSEDTEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNHNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + Q + KE F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGR--------QSKSQSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLEKEL----AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE E + FP+ ER +DD++ M FFVGNDFLP+LP L I E
Sbjct: 247 YLLHLCIVREYLELEFQDLKKDGRMTFPFDMERVIDDFILMAFFVGNDFLPNLPHLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + LYK+ + K
Sbjct: 307 GALALMFRLYKEILPK 322
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLM-VGHEYVLGLCWVLK 450
VD S EE ++ EV L++ F KD+YY KF+ + L + YV GL WVL
Sbjct: 489 VDTSPEEAKAAMEV-LYQQKFQEWKDKYYSEKFEWTAETKEQGLRELAENYVQGLQWVLY 547
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYY+G RSW W++ FHY+P SD + D NF G QP
Sbjct: 548 YYYRGIRSWPWFYKFHYSPMISDVMKGLNADMNFTLG-QP 586
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS-VEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL +A LS VE+S
Sbjct: 617 NSPIIDFYPRDFELDMNGKKQEWEAVVKIPFIDEKRLLDGMATKNHLLSDVEKS 670
>gi|145242532|ref|XP_001393839.1| exonuclease Kem1 [Aspergillus niger CBS 513.88]
gi|134078390|emb|CAK40380.1| unnamed protein product [Aspergillus niger]
Length = 1406
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 171/387 (44%), Positives = 236/387 (60%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIAENR--------IP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++P+KL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE A+ EK +A G +P E+ FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AETAK--EKAIAQGIEMPKEEA----FDSNCITPGTEFMAKLTEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FINKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPLYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F+++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFSLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYLE E L FP+ E+ +DD++ M FFVGNDF
Sbjct: 236 KKSKELEHQNFYLLHLCMVREYLELEFQELEQEGVLSFPFDMEKVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK+++ K
Sbjct: 296 LPNLPNLHINEGALAFMFKIYKESLPK 322
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
+ R +D+ V E S EE + +E+ F K+ YY KF D + YV
Sbjct: 473 IIRRYDNAKVQELSAEEAQQAAEKKYEEKFQEWKNNYYVGKFGWGLDSHEEMKELTENYV 532
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
GL WVL YYY+G SW W+F +HYAP SD DTNF G
Sbjct: 533 QGLQWVLYYYYRGIASWPWFFKYHYAPMISDVKKGLNADTNFRLG 577
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++E RL ALA L+ EE
Sbjct: 610 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALATREHLLTPEE 661
>gi|402082044|gb|EJT77189.1| 5'-3' exoribonuclease 1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1452
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/382 (43%), Positives = 229/382 (59%), Gaps = 72/382 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D E+EM + IF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTHDTSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + R+K +++G LP E+ FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTA-------LDAEQARDKAISEGKELPKEEP----FDSNCITPGTAFMAKLSEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQPD++ N +HCL G DADLI
Sbjct: 151 VNKKVSEDKEWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPDYNDNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +QA+ ++ Q
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQAKSKELEHQ-------------------------- 244
Query: 296 VEFIFVRLSVLREYLE-------KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
F + L ++REYLE KE AM FP+ ER +DD++ M FFVGNDFLP+LP
Sbjct: 245 -NFYLLHLCIVREYLELEFQELKKEGAM---SFPFDMERVIDDFILMAFFVGNDFLPNLP 300
Query: 349 SLEIREGAVDRLVNLYKKTVYK 370
L I EGA+ + LYK+ + K
Sbjct: 301 HLHINEGALALMFKLYKQILPK 322
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWED 413
EG ++ L + + +E N +K V ++S EE RL++
Sbjct: 443 EGNRSLVITLPQSPEASDDDGFEEEGNAAAHREMLKYDRAAVVDTSPEEAKEAMERLYQQ 502
Query: 414 GF---KDRYYESKFD---VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
F KD+YY KF+ P+ + YV GL WVL YYY+G RSW W++ +HY
Sbjct: 503 KFQEWKDKYYSEKFEEWSTPELKEEGLRQLCENYVQGLQWVLYYYYRGIRSWPWFYKYHY 562
Query: 468 APFASDFINIAEVDTNFETGTQP 490
+P SD + D NF+ G QP
Sbjct: 563 SPMISDVMKGLNADMNFKLG-QP 584
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF +D+NGKK W+ V +PF+DE RL A+A + L+ +E
Sbjct: 615 DSPIIDFYPRDFVLDMNGKKQDWEAVVKIPFIDERRLLDAMATKNDLLADDE 666
>gi|50293237|ref|XP_449030.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528343|emb|CAG62000.1| unnamed protein product [Candida glabrata]
Length = 1522
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 223/373 (59%), Gaps = 59/373 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN IH
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSFIH 41
Query: 61 PCTHPEDKPA---PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D ++E+ IF ID LF +++P+K+ YM+IDGVAPRAKMNQQRSR
Sbjct: 42 TCTHGNDDEGVTQKMSDEELYSRIFTYIDHLFLMIKPKKVFYMSIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + +T + + +K + +G +P KG FDSNCITPGT FMA+L+ L+Y
Sbjct: 102 RFRTAMDTEKAL-------QKAMDEGEEIP----KGDAFDSNCITPGTEFMAQLTRNLNY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
YIHD++ ND W+ I+VILS VPGEGEHKIMD+IR AQ D+D NT+HC+ G DADL
Sbjct: 151 YIHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL+TH P+F ++REE G+ + + + E
Sbjct: 211 IMLGLSTHAPHFALLREEV---------TFGRRNNSRNKNL---------------EEQN 246
Query: 298 FIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + LS+LREYLE E +L F + FE LDD++ + F +GNDFLP+LP L + +G
Sbjct: 247 FYLLHLSLLREYLELEFKEIGDDLQFEFDFENILDDFILVMFVIGNDFLPNLPDLHLNKG 306
Query: 356 AVDRLVNLYKKTV 368
A L+ +K+ +
Sbjct: 307 AFPVLLQTFKEAL 319
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+ +K YY SKF + +D+ + + + YV GL WVL YYYQGC SW WY+ FHYAP S
Sbjct: 512 ENWKAEYYRSKFGIKRDEPERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRIS 571
Query: 473 DFINIAEVDTNFETGT 488
D + FE G+
Sbjct: 572 DLAKGLDQIIKFEQGS 587
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 642 QMKMAAQSTKAPSFIPGG----QFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + +P + P+ SPI+DFYP + ++D NGK W+ V LLPFVD
Sbjct: 593 QQLMAVLPERSKNLLPAAYRPLMYDPK-SPILDFYPSEVQLDKNGKTADWEAVVLLPFVD 651
Query: 698 EERLHKALAPYYEKLSVEESE 718
E RL +A KLS EE +
Sbjct: 652 ENRLIEATNHCLAKLSPEEKQ 672
>gi|71665066|ref|XP_819507.1| 5'-3' exonuclease XRND [Trypanosoma cruzi strain CL Brener]
gi|70884811|gb|EAN97656.1| 5'-3' exonuclease XRND, putative [Trypanosoma cruzi]
Length = 807
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 205/557 (36%), Positives = 273/557 (49%), Gaps = 132/557 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ F+ WL R Y CVED P+EV +GQ +P S FDN YLDM
Sbjct: 1 MGIAGFYLWLQRWYGD----CVEDVPEEVVKAALDGQPLPASSD----TTQRFDNFYLDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P+ E+EM IF +D L++IVRPRK L + IDGVAP++KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA++E E A+ E ++ G LP + S +D N ITP TPFM R+
Sbjct: 113 RSRRFRAAEERIESEVFSAQCAEDVVKKGLPLPQTR---SRWDHNVITPSTPFMERVGLA 169
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
+ ++I ++N DP W+ I VI SDA+VPGEGEHKIM YIR+ RAQ ++P T H + G D
Sbjct: 170 IEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMD 229
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + TI+R E F+P+ R
Sbjct: 230 ADLICLGLSTHEEHVTILRNQLTETFQPDHNR---------------------------- 261
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L R L + FER LDD++F+CFFVGNDFLPH+P +
Sbjct: 262 -------FCYFSLYKYRLRLRDDFGGIG---QMDFERVLDDFIFLCFFVGNDFLPHVPLI 311
Query: 351 EIREGAVDRLVNLY----KKTVYKTQ---------------------EQLRQEENGGGGG 385
I+ ++ L++ Y K Y T E+L+QE GG
Sbjct: 312 SIKTKGIELLLDHYVRGFKDHSYLTHGGEVNYGNLAKFLRFFLVGYMEKLKQEY--GGVL 369
Query: 386 RGVKRSFDDVDE--------------------SSEEEESNDEVRLW-------------- 411
R +R+ V+E + ++ SN +L
Sbjct: 370 RAKQRAKAKVEERVKELERELEEQLNSLQKDRKNAQQVSNAAHKLLLSIMRERARLVVDK 429
Query: 412 --------EDGFKDRYYESKFDV-PKDDIAFR---LMVGHEYVLGLCWVLKYYYQGCRSW 459
D +D+YYE KF P D AF + EY+ G WV++YY GC SW
Sbjct: 430 EPLGFSYVNDDHRDKYYEKKFGWDPADREAFEKKIQLCCAEYLRGTQWVMRYYTTGCPSW 489
Query: 460 KWYFPFHYAPFASDFIN 476
WY+PF+YAP D +
Sbjct: 490 DWYYPFYYAPLLQDLAH 506
>gi|301762972|ref|XP_002916907.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ailuropoda melanoleuca]
Length = 1703
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 220/368 (59%), Gaps = 61/368 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K L G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ +G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTX---QGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLDADLI 207
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 208 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 243
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 244 HLLHLSLMREYIDYEFSVLKDKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 303
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 304 LPLLYGTY 311
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKF--DVPKDDIAFRLMVGH 439
G V S D++++ +E+++ L+E F K YY +K DV DD F
Sbjct: 403 GEEVVTSKDNLEDETEDDD------LFETEFRQYKRTYYMTKMGVDVVSDD--FLADQAA 454
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV + W+L YYY G +SW WY+P+HYAPF SD NI+ + +FE G
Sbjct: 455 CYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNISTLKIHFELG 502
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 534 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 586
>gi|367015260|ref|XP_003682129.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
gi|359749791|emb|CCE92918.1| hypothetical protein TDEL_0F01070 [Torulaspora delbrueckii]
Length = 1471
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 220/372 (59%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLIL--------QLIEGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I+ ID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRMTEEEVFAKIYAYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEK E K +A+G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMD-AEKAFE------KAVANGEEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD++ ND W+ I VI S VPGEGEHKIMD+IR RAQ D D NT+HC+ G DADLI
Sbjct: 151 IHDKITNDSKWRDIDVIFSGHEVPGEGEHKIMDFIRNLRAQKDFDSNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+ H+P+F ++REE V G+ K + F
Sbjct: 211 MLGLSVHDPHFALLREEV---------VFGRRSSTAKSLENQN----------------F 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ +S+LREY++ E L F Y FER LDD++ + F +GNDFLP+LP L + +GA
Sbjct: 246 YLLHISILREYMQLEFQEIADELQFDYDFERILDDFILVMFVIGNDFLPNLPDLHLNKGA 305
Query: 357 VDRLVNLYKKTV 368
L+ +K+ +
Sbjct: 306 FPVLLQTFKEAL 317
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE ++E ++++ F KD+YY+ K ++ + YV GL WVL YYY+GC
Sbjct: 492 DQEELDNEREVYDERFAQWKDKYYKDKLGFSFNETEKLTKLCQNYVEGLQWVLYYYYRGC 551
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+SW WY+ HY+P SD + +FE G
Sbjct: 552 QSWGWYYRHHYSPRISDLKLGLDQVISFEKG 582
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP P ++SPI DFYP++ +D NGK W+ V LL FVD
Sbjct: 589 QQLMAVLPERSKNLIPTA-LRPLMFNENSPIRDFYPKEVDLDKNGKTADWEAVVLLSFVD 647
Query: 698 EERLHKALAPYYEKLSVEE 716
E RL A+APY +LS EE
Sbjct: 648 EHRLIDAMAPYLPRLSPEE 666
>gi|326435791|gb|EGD81361.1| hypothetical protein PTSG_11834 [Salpingoeca sp. ATCC 50818]
Length = 1592
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/256 (59%), Positives = 193/256 (75%), Gaps = 7/256 (2%)
Query: 31 GQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFR 90
G+ ++++P +G+EFDNLYLDMNGIIHPC HPED+ P E+ MM AIFE ID +F
Sbjct: 303 GELRTLEAAQPEHDGIEFDNLYLDMNGIIHPCCHPEDREPPATEEAMMEAIFEYIDHVFT 362
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPE- 149
+VRPR+LLY+AIDGVAPRAKMNQQR+RRFR+++E ++ + + E L ADG + P+
Sbjct: 363 LVRPRRLLYLAIDGVAPRAKMNQQRARRFRSAQEAEDRKRVIEKRVEALEADG--VAPKY 420
Query: 150 ----KEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
+K FDSNCITPGTPFMARL+ L YI DRL+++ WK ++VILSDA+VPGEG
Sbjct: 421 YYQVTKKKMSFDSNCITPGTPFMARLAQRLREYIDDRLHSNAAWKDVQVILSDASVPGEG 480
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIMD+IR+Q++ P +DPN +H L GADADLIMLGLATHEP+F IIREEF P +PC
Sbjct: 481 EHKIMDFIRQQQSLPSYDPNMRHVLYGADADLIMLGLATHEPHFYIIREEFVPPPKKPCP 540
Query: 266 VCGQMGHEMKECVGLD 281
+CG GH + EC G D
Sbjct: 541 ICGFRGHALNECTGGD 556
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+GFK+ YY KF+ F + Y G+CWV+ YY+QGC SW WY+ +HYAPF S
Sbjct: 1217 EGFKEMYYRKKFESAASGATFLRDLATAYTEGVCWVMLYYFQGCPSWSWYYKYHYAPFCS 1276
Query: 473 DFINIAEVDT 482
DF + ++DT
Sbjct: 1277 DFAAL-DMDT 1285
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 652 APSFIPG--GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYY 709
+ SF+P + S + FYP F++DLNGKK+AWQGV LLPF+DE+ L AL Y
Sbjct: 1311 SSSFLPARWAKLMTGKSAVSRFYPSSFRVDLNGKKYAWQGVTLLPFMDEDVLLTALDRVY 1370
Query: 710 EKLSVEES 717
L+ EE+
Sbjct: 1371 PSLTGEEA 1378
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
R +DDWV +C VGNDFLPHLPSL I EGA+D L LY
Sbjct: 801 RMVDDWVLLCCLVGNDFLPHLPSLSIHEGAIDTLTRLY 838
>gi|254571103|ref|XP_002492661.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|238032459|emb|CAY70482.1| Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic
processing (P) bodies [Komagataella pastoris GS115]
gi|328353336|emb|CCA39734.1| 5'-3' exoribonuclease 1 [Komagataella pastoris CBS 7435]
Length = 1451
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 226/383 (59%), Gaps = 63/383 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P +I +ED EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWP-MISEPIEDS------------------QIAEFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D E+EM AIF I+ LF +++P K +MAIDGVAPRAKMNQQRSRRF
Sbjct: 42 NCTHSNDGSVDLMKEEEMFSAIFAYIEHLFTLIKPGKTFFMAIDGVAPRAKMNQQRSRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + E AEK E+A+ +G I K +FDSNCITPGT FMA+++ L ++I
Sbjct: 102 RTAIE-AEKSVEIAQ------KNGLI----TSKDENFDSNCITPGTEFMAKVTTNLKFFI 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++++D W+ ++VILS VPGEGEHKIMDYIR +AQ +DPNT+HC+ G DADLIM
Sbjct: 151 HQKISSDAKWQKVQVILSGHEVPGEGEHKIMDYIRFLKAQEGYDPNTRHCIYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LGL H+P+F I+REE + ++A DV SE
Sbjct: 211 LGLVIHDPHFAILREEVVFGRGSKASSTDV---------------------------SEQ 243
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+F + LS+LREYL E + F Y ER LDD++F+ + +GNDFLP+LP L I +
Sbjct: 244 QFYLLHLSLLREYLALEFKDLEDQIKFDYDLERILDDFIFIMYVIGNDFLPNLPDLHINK 303
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQ 377
GA RL+ K+T+ + L++
Sbjct: 304 GAFPRLLATIKETMIDSDGYLQE 326
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 396 DESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
DE++ EE+ N +++ F K++YY+ KF D L + Y+ GL WVL YY
Sbjct: 497 DENTLEEQKN----IYDTKFVNWKNKYYKEKFGFTLSDTEDILKLTESYIQGLQWVLFYY 552
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
Y+G SW+WY+P++YAP SD + F+ GT
Sbjct: 553 YRGVPSWQWYYPYYYAPRISDIKLGIKACLEFDKGT 588
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPII+FYP++ +ID NGK +W+ V + FVDE+RL +AL PY KL+ EE +
Sbjct: 620 NSPIIEFYPDEVEIDKNGKTASWEAVVKINFVDEKRLLEALEPYNSKLNAEERQ 673
>gi|119498925|ref|XP_001266220.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
gi|119414384|gb|EAW24323.1| exonuclease Kem1, putative [Neosartorya fischeri NRRL 181]
Length = 1414
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 173/386 (44%), Positives = 231/386 (59%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENR--------IP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++PRKL +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK +A G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAIAQGIEMPKE----DPFDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G+ ++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADLI
Sbjct: 151 INKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG +V+
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQVQK 236
Query: 298 ---------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KPKELEHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK + K
Sbjct: 297 PNLPNLHINEGALSLMFKIYKDVLPK 322
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +D+ V E S EE + +E+ F KD+YY SKF D+ + YV
Sbjct: 477 VIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKYYMSKFGWGLDNHEEMRKLTENYV 536
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GL WVL YYY+G SW W+F +HYAP SD I D NF+ G QP
Sbjct: 537 QGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKGLNADMNFKLG-QP 583
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF+DE RL +ALA L+ EE
Sbjct: 614 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEE 665
>gi|50549393|ref|XP_502167.1| YALI0C23144p [Yarrowia lipolytica]
gi|49648034|emb|CAG82487.1| YALI0C23144p [Yarrowia lipolytica CLIB122]
Length = 1526
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 222/373 (59%), Gaps = 63/373 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q+V +IP E+DNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLI--------SQQVIDTQIP-----------EYDNLYLDMNSILH 41
Query: 61 PCTHPE-DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH + D E++M AIFE I+ LF +RP+KL +MAIDGVAPRAKMNQQRSRRF
Sbjct: 42 VCTHKDADVTFQLTEEQMFRAIFEYIEHLFSKIRPKKLFFMAIDGVAPRAKMNQQRSRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + + + + K L +G IL K FDSN ITPGT FM +L+ L+Y++
Sbjct: 102 RTA-------LDAEKAKAKALEEGTIL-----KEDQFDSNAITPGTEFMEKLTTQLNYFV 149
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H +++ D W+ I ++LS VPGEGEHKI + IR +AQPD+DPNT+HC+ G DADLIM
Sbjct: 150 HKKVSEDADWQNIDIVLSGHEVPGEGEHKINECIRINKAQPDYDPNTRHCVYGLDADLIM 209
Query: 240 LGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
LGL +H+P+F+++REE F P +A P + E
Sbjct: 210 LGLGSHDPHFSLLREEVVFGPRRAGPKAL---------------------------EEQN 242
Query: 298 FIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + +S+LREYLE E + FPY FER LDD++ + FFVGNDFLP+LP + I E
Sbjct: 243 FYLLHISLLREYLELEFQDLADEISFPYDFERILDDYILLFFFVGNDFLPNLPQIHINED 302
Query: 356 AVDRLVNLYKKTV 368
+ V LYKK +
Sbjct: 303 SHALFVELYKKVM 315
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 398 SSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHE-YVLGLCWVLKYYYQ 454
+ EE N + W KD YY+ KF D+ L E YV GL W+L YYY
Sbjct: 491 AQREEIYNQKFEEW----KDDYYKKKFGWSTTTDEGKAELKALTENYVEGLQWILHYYYD 546
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
G SW WY+ +HYAP SD + + F+ G QP
Sbjct: 547 GVPSWSWYYGYHYAPRVSDVRKGLQANLKFKAG-QP 581
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
A +SPI DFYP DF++D NGKK W+ V +PFVDE RL A+A L+ E++
Sbjct: 608 MADSNSPIYDFYPNDFELDKNGKKADWEAVVKIPFVDESRLLTAMATKETGLTAGENK 665
>gi|70985050|ref|XP_748031.1| exonuclease Kem1 [Aspergillus fumigatus Af293]
gi|66845659|gb|EAL85993.1| exonuclease Kem1, putative [Aspergillus fumigatus Af293]
gi|159126045|gb|EDP51161.1| exonuclease Kem1, putative [Aspergillus fumigatus A1163]
Length = 1418
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 231/387 (59%), Gaps = 82/387 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENR--------IP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ L+ ++PRKL +MA+DGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPRKLFFMAVDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEVA+ EK +A G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AEVAK--EKAIAQGIEMPKEDP----FDSNCITPGTEFMAKLTQQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G+ ++LS VPGEGEHKIM+YIR +AQP +DPN +HCL G DADL
Sbjct: 150 FINKKISEDKDWQGVDIVLSGHEVPGEGEHKIMEYIRHAKAQPGYDPNIRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +H+P+F ++REE +TFG +V+
Sbjct: 210 IMLGLLSHDPHFCLLREE----------------------------------VTFGRQVQ 235
Query: 298 ----------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDF 343
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDF
Sbjct: 236 KKPKELEHQNFYLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDF 295
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYK 370
LP+LP+L I EGA+ + +YK + K
Sbjct: 296 LPNLPNLHINEGALSLMFKIYKDVLPK 322
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +D+ V E S EE + +E+ F KD+YY SKF D+ + YV
Sbjct: 477 VIRRYDNAKVQEISPEEAQKAAEKKYEEKFQDWKDKYYMSKFGWGLDNHEELRKLTENYV 536
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GL WVL YYY+G SW W+F +HYAP SD I D NF+ G QP
Sbjct: 537 QGLQWVLYYYYRGIASWPWFFKYHYAPMISDVIKGLNADMNFKLG-QP 583
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP +F++D+NGKK W+ V +PF+DE RL +ALA L+ EE
Sbjct: 614 ESPIIDFYPREFELDMNGKKMEWEAVVKIPFIDERRLLEALATREHLLTPEE 665
>gi|410077707|ref|XP_003956435.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
gi|372463019|emb|CCF57300.1| hypothetical protein KAFR_0C03080 [Kazachstania africana CBS 2517]
Length = 1499
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 165/374 (44%), Positives = 221/374 (59%), Gaps = 63/374 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMI--------SQLIEGAQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE A +K + G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMD-----AEAAL--KKAIEKGEEIP----KGEPFDSNAITPGTEFMAKLTKNLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ + VI S VPGEGEHKIMD+IR R+Q D++ NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVDVIFSGHEVPGEGEHKIMDFIRNIRSQKDYNNNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
MLGL+TH P+F ++REE F ++P + Q
Sbjct: 211 MLGLSTHAPHFALLREEVVFGRRSSKPAPLEHQ--------------------------- 243
Query: 297 EFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS+LREY+E E +L F Y FER LDD++ + F +GNDFLP+LP L + +
Sbjct: 244 NFYLLHLSLLREYMELEFNEIADDLKFDYDFERILDDFILVMFVIGNDFLPNLPDLHLNK 303
Query: 355 GAVDRLVNLYKKTV 368
GA L+ +K+ +
Sbjct: 304 GAFPVLLQTFKEAL 317
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGH 439
G R V + + + EE E L+ + F K YY+ K ++D +
Sbjct: 479 GAIRRVIKRYQQAVLVEDAEELEREQTLYNEKFQNWKQEYYKDKLGFAQNDSETVTTLAK 538
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
YV GL WVL YYY+GC SW WY+ HYAP SD
Sbjct: 539 NYVEGLQWVLYYYYRGCPSWGWYYRDHYAPRISDL 573
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 645 MAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEER 700
MA ++ + IP F P +SPI+DFYP K+D NGK W+ V LL FVDE R
Sbjct: 596 MAVLPERSKNLIPAA-FRPLMYDTNSPILDFYPSQVKLDKNGKTADWEAVVLLTFVDENR 654
Query: 701 LHKALAPYYEKLSVEE 716
L A+ P KLS EE
Sbjct: 655 LVDAMKPLLSKLSPEE 670
>gi|121718863|ref|XP_001276218.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
gi|119404416|gb|EAW14792.1| exonuclease Kem1, putative [Aspergillus clavatus NRRL 1]
Length = 1408
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 173/386 (44%), Positives = 232/386 (60%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPTISMLIAENR--------IP-----------EFDALYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK +A G +P E FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAIAQGIEMPKE----DAFDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G++++LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADLI
Sbjct: 151 ISKKISEDKDWQGVEIVLSGHEVPGEGEHKIMEYIRHAKAQPDYDSNIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG +V+
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQVQK 236
Query: 298 ---------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFL 344
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KPKELEHQNFFLLHLCMVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + +YK+ + K
Sbjct: 297 PNLPNLHINEGALALMFKIYKEVLPK 322
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 339 VGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDD--VD 396
+ ND H+P + + DR + L T + ++E R V R +++ V
Sbjct: 430 LANDL--HVPWTTVADEHGDRFIRLQLPTNDDDDSEEEEDEEASMAVRRVIRRYENAKVQ 487
Query: 397 ESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
E S EE + +E+ F KD+YY SKF D+ + YV GL WVL YYY
Sbjct: 488 EISPEEAQKAAEQKYEEKFQEWKDKYYMSKFGWGLDNHEEMRKLTENYVQGLQWVLYYYY 547
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
+G SW W+F +HYAP SD + D NF+ G QP
Sbjct: 548 RGIASWPWFFKYHYAPMISDVTKGLKADMNFQLG-QP 583
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++E RL ALA L+ EE
Sbjct: 614 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIEERRLLDALATKSHLLTPEE 665
>gi|425774945|gb|EKV13236.1| Exonuclease Kem1, putative [Penicillium digitatum Pd1]
Length = 1393
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 173/376 (46%), Positives = 229/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YPS+ + E + IP EFD+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAESR--------IP-----------EFDSLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE A+ EK + G +P E FDSNCITPGT FM +L+ L Y+
Sbjct: 102 FRTALD-----AENAK--EKAIQQGLEMPKE----DAFDSNCITPGTEFMQKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQPD++ N +HCL G DADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q+ + KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQVSKKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ LSV+REYLE E L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + LYK+ + K
Sbjct: 307 GALALMFKLYKEVLPK 322
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY +KF D+ + YV GL WVL YYY+G SW W+F +HYAP SD
Sbjct: 506 WKDKYYRTKFGWGLDNKEEMKKLTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDV 565
Query: 475 INIAEVDTNFETGTQP 490
+ D +F+ G QP
Sbjct: 566 NDGLGADMDFKLG-QP 580
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF +D+NGKK W+ V +PF+DE+RL AL +LS +E
Sbjct: 611 DSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADE 662
>gi|425772513|gb|EKV10914.1| Exonuclease Kem1, putative [Penicillium digitatum PHI26]
Length = 1393
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 173/376 (46%), Positives = 229/376 (60%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YPS+ + E + IP EFD+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPSISMLIAESR--------IP-----------EFDSLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE A+ EK + G +P E FDSNCITPGT FM +L+ L Y+
Sbjct: 102 FRTALD-----AENAK--EKAIQQGLEMPKE----DAFDSNCITPGTEFMQKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQPD++ N +HCL G DADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE Q+ + KE F
Sbjct: 211 MLGLLSHDPHFCLLREE--------VTFGRQVSKKSKEL----------------EHQNF 246
Query: 299 IFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ LSV+REYLE E L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLLHLSVVREYLELEFQELEQEGVLDFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + LYK+ + K
Sbjct: 307 GALALMFKLYKEVLPK 322
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY +KF D+ + YV GL WVL YYY+G SW W+F +HYAP SD
Sbjct: 506 WKDKYYRTKFGWGLDNKEEMKKLTQNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDV 565
Query: 475 INIAEVDTNFETGTQP 490
+ D +F+ G QP
Sbjct: 566 NDGLGADMDFKLG-QP 580
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF +D+NGKK W+ V +PF+DE+RL AL +LS +E
Sbjct: 611 DSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKETQLSADE 662
>gi|221054456|ref|XP_002258367.1| exoribonuclease [Plasmodium knowlesi strain H]
gi|193808436|emb|CAQ39139.1| exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 1324
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 233/420 (55%), Gaps = 60/420 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME------------- 47
MGVP F+RWL +YP + E + +V ++ + G
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIQDGHRDAEGKATYRVPDLSDYVNN 60
Query: 48 -------------FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 94
FDNLYLDMNGIIH C+H ++ K +E+ + IF I+RLF I+ P
Sbjct: 61 TDENHCSDNINGYFDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDIIEP 120
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS 154
RKLLYMAIDGVAP+AKMNQQRSRRF++ + + +REK L++ +P E+ +
Sbjct: 121 RKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERKAYIELREKFLSENREVP---EEFT 177
Query: 155 HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIR 214
+DSN ITPGT FM LS L Y++ ++ ND WK I VI SDANV GEGEHKI ++I+
Sbjct: 178 FWDSNIITPGTQFMYELSVALKYFVEHKITNDDKWKNIVVIFSDANVCGEGEHKIYNFIK 237
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE-------------------E 255
QR QP +DPNT+H + G DADLIML LA+HEP F I+RE +
Sbjct: 238 SQRGQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQDKDFVGK 297
Query: 256 FKPNQARPCDVCGQMGHEMKECVGLDAEP-------NPESVITFGSEVEFIFVRLSVLRE 308
K Q P +C + K+ +P +P I + E + L++LRE
Sbjct: 298 LKSKQDLP--LCTTHMRKTKKIYTKYNDPHYANINKSPNYSINDENWNELQILDLTILRE 355
Query: 309 YLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
YL KE + Y+ ER +DD++F+CF GNDFLPHLPS+ I G++D+LV LY+K +
Sbjct: 356 YLSKEFFFDS---SYNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQKVL 412
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 418 RYYESKFDVPKDDIA--FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
+YY++KF + + D F V ++Y+ GL WVL YY+Q C W WY+P++YAP +SD I
Sbjct: 728 KYYKAKFHLDETDYIDDFVKEVVYKYIEGLAWVLSYYFQSCPMWHWYYPYYYAPLSSDLI 787
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP+ FK + NGKK+ +Q V LLPFVD+ER+ K + L+ EE
Sbjct: 831 DSPIIDFYPKTFKEEENGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEE 882
>gi|406601833|emb|CCH46556.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 1519
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 224/374 (59%), Gaps = 63/374 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q ++G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLI--------SQLIDGNQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CT P+D+ K E+E+ AIF ID LF ++P+++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTRPKDEDVTKRLSEEEVFSAIFAYIDHLFDTIKPKEVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + EK + +G +P K FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAVDAEKNL-------EKAIKEGTEIP----KDEPFDSNSITPGTEFMAKLTRYLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH +++ D W+ +++ILS VPGEGEHKIM++IR ++A D++PN +HC+ G DADLI
Sbjct: 151 IHKKVSTDSRWQNVQIILSGHEVPGEGEHKIMEFIRTKKASKDYNPNLRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
MLGL +HEP+F ++REE F Q +P V E
Sbjct: 211 MLGLVSHEPHFALLREEVTFGRRQTQPKTV---------------------------EEQ 243
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+F + LS++REYLE E + F Y FER LDD++ + + +GNDFLP+LP L + +
Sbjct: 244 KFYLLHLSLVREYLELEFQDLKETISFDYDFERVLDDFILIMYVIGNDFLPNLPDLHLNK 303
Query: 355 GAVDRLVNLYKKTV 368
GA L+ +K+ +
Sbjct: 304 GAFPLLIETFKEAL 317
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 413 DGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+ +KD YY+ K + KD+ R + YV GL WVL YYY+G +SW WY+ +HYAP
Sbjct: 510 ENWKDNYYKEKLEFSIKDEDKLRELT-ENYVEGLQWVLFYYYKGVQSWPWYYRYHYAPRI 568
Query: 472 SDFINIAEVDTNFETGT 488
SD +V N E GT
Sbjct: 569 SDIKKGLDVIINLEKGT 585
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPIIDFYP D + D+NGK W+ V L FVD +RL A+ P+ +L+ EE +
Sbjct: 617 NSPIIDFYPSDVETDMNGKTAEWEAVVKLSFVDPDRLKDAMKPHNAELTPEEKQ 670
>gi|255728793|ref|XP_002549322.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
gi|240133638|gb|EER33194.1| 5'-3' exoribonuclease 1 [Candida tropicalis MYA-3404]
Length = 1513
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 162/373 (43%), Positives = 226/373 (60%), Gaps = 60/373 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q ++ +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLI--------SQLIDENQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D + +D+M AIF ID LF+I++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 ACTHSNDDTLTRLTDDQMYSAIFNYIDHLFQIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + E E + +K +A+G ++P E FDSN ITPGT FM++L+ L Y+I
Sbjct: 102 RTAYEAEENL-------KKAIANGEVIPKE----DPFDSNSITPGTEFMSKLTVNLKYFI 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++ D W I +ILS VPGEGEHKIM+YIR R+QP+++PN +HC+ G DADLIM
Sbjct: 151 HKKITEDSNWANIDIILSGHEVPGEGEHKIMEYIRAIRSQPEYNPNLRHCIYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L L TH+P+F ++REE F P++ D K+ S+ +
Sbjct: 211 LSLVTHDPHFALLREEVTFGPSKKSLGD---------KDL----------------SDQK 245
Query: 298 FIFVRLSVLREYLEKELA-MPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + +S+LREYL E + N L F Y+FER LDD++ + + +GNDFLP+LP L I +G
Sbjct: 246 FFLLHISLLREYLSLEFQDLENQLTFEYNFERILDDFILIMYVIGNDFLPNLPDLFINKG 305
Query: 356 AVDRLVNLYKKTV 368
A L+ + K+ +
Sbjct: 306 AFPLLIAVIKQAL 318
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 413 DGFKDRYYESK--FDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPF 470
+ +KD YY+SK F + +D + H YV GL WVL YYY+G SW W++ +HYAP
Sbjct: 512 EDWKDNYYKSKLHFSIKEDKEELLKLTTH-YVEGLQWVLYYYYRGVPSWNWFYKYHYAPR 570
Query: 471 ASDF 474
SD
Sbjct: 571 ISDI 574
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%)
Query: 645 MAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
+ A+S K + + SPII+FYP + ID+NGK +W+ V LL FVDE++L
Sbjct: 606 LPARSRKLMPLVYRPLMTDEKSPIINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIDV 665
Query: 705 LAPYYEKLSVEES 717
L P EKL+ +E+
Sbjct: 666 LKPIEEKLTPDET 678
>gi|347831559|emb|CCD47256.1| similar to 5'-3' exoribonuclease 1 [Botryotinia fuckeliana]
Length = 1389
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 222/376 (59%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YPS+ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E++M +AIF I+ L+ ++P++L YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + +V REK + +G +P E FDSN ITPGT FM +L+ L Y+
Sbjct: 102 FRTA-------LDVENAREKAIKEGKEMPKE----DAFDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G +++LS VPGEGEHKIM+YIR ++AQPD+DPN +HCL G DADLI
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + ++ H+ F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSKAK-SKELEHQ-----------------------NF 246
Query: 299 IFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLMHLCIVREYLELEFQELKEDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK + K
Sbjct: 307 GALALMFKVYKTILPK 322
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 394 DVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLK 450
+V + S+E+ + R +E+ F KD+YYE KF+ + + + YV GL WVL
Sbjct: 482 EVLDVSKEQAQAEMERKYEEKFQEWKDKYYEGKFEWDRKNEIELTKLCENYVQGLQWVLY 541
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYY+G SW WY+ +HY+P SD I + D NF+ G QP
Sbjct: 542 YYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLG-QP 580
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A LS E
Sbjct: 612 SPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAE 662
>gi|340729609|ref|XP_003403090.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Bombus terrestris]
Length = 1626
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/371 (45%), Positives = 222/371 (59%), Gaps = 64/371 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S +YP C+ +K + +IP EFDNLYLD+NGIIH
Sbjct: 1 MGIPKFFRYISERYP-----CLTEK---LKDYQIP-----------EFDNLYLDVNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D E+ + IF I+ LFR+++P+KL ++A+DGVAPRAK+NQQRSRR
Sbjct: 42 DCSHPDDMDITFRISEETIFKNIFHYIEVLFRMIQPQKLFFIAVDGVAPRAKINQQRSRR 101
Query: 119 FRASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
F+ +K+ A+I+E K G LP EK FDSNCITPGT FM++L L Y
Sbjct: 102 FKNAKD--------AKIQEDKAKIKGTTLPKEKR----FDSNCITPGTVFMSKLDEQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ D W+ KVI S + VPGEGEHKIMDYIR + Q ++D NT+HCL G DADL
Sbjct: 150 FITYKISTDKLWQKCKVIFSGSQVPGEGEHKIMDYIRYMKTQANYDVNTKHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
IMLGL THE +FT++REE F Q + C PE E
Sbjct: 210 IMLGLCTHEVHFTLLREEVTFGKKQXKVC-------------------LTPE-------E 243
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+F LS+LREY+ E + LPFPY+ E +DDW+ M F +GNDF+PHLP+L I
Sbjct: 244 TKFCLFHLSLLREYINHEFSSLKEKLPFPYNLENIIDDWILMGFLIGNDFIPHLPNLHIV 303
Query: 354 EGAVDRLVNLY 364
GA+ L +Y
Sbjct: 304 HGALSVLYQVY 314
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
K YY +K D F YV + W L YYY GC SW WY+P HYAP+ SD
Sbjct: 433 KKDYYINKLKYENIDEDFLRSQAEGYVRAIQWNLNYYYNGCCSWSWYYPHHYAPYISDIK 492
Query: 476 NIAEVDTNFETG 487
+ ++ F+ G
Sbjct: 493 DFKDLKLEFDLG 504
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPII +YP +F+ DLNGK+ W+ V L+PF++E+ + A+AP+Y +++ EE
Sbjct: 538 SPIIKYYPTNFETDLNGKEQEWEAVVLIPFINEKDIVDAMAPHYPQITPEE 588
>gi|303319605|ref|XP_003069802.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240109488|gb|EER27657.1| exonuclease, putative [Coccidioides posadasii C735 delta SOWgp]
gi|320040722|gb|EFW22655.1| exonuclease [Coccidioides posadasii str. Silveira]
Length = 1445
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 234/380 (61%), Gaps = 68/380 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AEIAK--EKAIREGIEMPKEDP----FDSNCITPGTEFMAKLTKQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++VILS VPGEGEHKIM+YIR+ +AQPD+DPN +HCL G DADL
Sbjct: 150 FINKKVSEDAKWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IMLGL +H+P+F ++REE + NQ + ++ H+
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQNQKK----VKELEHQ--------------------- 244
Query: 295 EVEFIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L ++REYLE E L F + ER +DD++ M FFVGNDFLP+LP+L
Sbjct: 245 --NFYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 351 EIREGAVDRLVNLYKKTVYK 370
I EGA+ + +YK+ + K
Sbjct: 303 HINEGALAWMFKVYKEVLPK 322
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K++YYE KF D+ + YV GL WVL Y
Sbjct: 491 VKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGTDNDEEMRKLTENYVQGLQWVLYY 550
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD D +F+ G QP
Sbjct: 551 YYRGVASWPWFYRYHYSPMISDVKRGLAADMDFKLG-QP 588
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL KA+A L+ EE
Sbjct: 619 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEDRLLKAMASKEHLLTPEE 670
>gi|367003924|ref|XP_003686695.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
gi|357524997|emb|CCE64261.1| hypothetical protein TPHA_0H00510 [Tetrapisispora phaffii CBS 4417]
Length = 1492
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 225/373 (60%), Gaps = 58/373 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPLIL--------QLIENDQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D + E+E+ IF ID L ++P+K+ YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHGNDMDNTRQRLSEEEVYAKIFAYIDHLLNTIKPKKVFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE A +K +A+G LP KG FDSN ITPGT FMA+L+ L Y
Sbjct: 102 RFRTAMD-----AETAL--KKAIANGDELP----KGEPFDSNSITPGTEFMAKLTRNLKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+IHD+++ND W+ I+V+ S VPGEGEHKIMD+IR R+Q D++ NT+HC+ G DADL
Sbjct: 151 FIHDKISNDLNWQNIEVVFSGHEVPGEGEHKIMDFIRNLRSQKDYEQNTRHCIYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL+TH+P+F+++REE K R + G + E +
Sbjct: 211 IMLGLSTHDPHFSLLREEVKFGGRR--NNSGSLPLEKQ---------------------N 247
Query: 298 FIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + LS+LREY+ E NL F Y F+R LDD++ + F +GNDFLP+LP L + +G
Sbjct: 248 FYLLHLSLLREYMNLEFIEISTNLQFKYEFDRILDDFILIMFVIGNDFLPNLPDLHLNKG 307
Query: 356 AVDRLVNLYKKTV 368
A ++ +K+ +
Sbjct: 308 AFPVILQTFKEAL 320
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP P + SPI+DFYP + ++D NGK W+ V LL FVD
Sbjct: 629 QQLMAVLPERSKNLIPA-VLRPLMFDEKSPILDFYPNEVQLDKNGKSADWEAVVLLSFVD 687
Query: 698 EERLHKALAPYYEKLSVEESE 718
E+RL A+ PY EKL+ EE E
Sbjct: 688 EDRLVTAMQPYLEKLTPEEKE 708
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+ YV GL WVL YYY+GC SW WY+ HYAP SD
Sbjct: 572 IARNYVEGLQWVLYYYYRGCPSWSWYYKGHYAPRISDL 609
>gi|254582643|ref|XP_002499053.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
gi|238942627|emb|CAR30798.1| ZYRO0E02486p [Zygosaccharomyces rouxii]
Length = 1526
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 222/372 (59%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FF++++ ++P ++ Q + GQ IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFKYIAERWPMIL--------QLIEGQHIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TCTHGNDDDVTKRLTEEEVFGKIFVYIDHLFHTIKPKKVFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGEEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD++ ND W+ +K+I S VPGEGEHKIMD+IR R Q D++PNT+HC+ G DADLI
Sbjct: 151 IHDKITNDSSWRDVKIIFSGHEVPGEGEHKIMDFIRNIRGQGDYNPNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+ H P+F ++REE V G+ G K+ L+ + F
Sbjct: 211 MLGLSVHAPHFALLREEV---------VFGKRG---KKSTALEHQ-------------NF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ +S+LREY+E E L F Y FER LDD++ + F +GNDFLP+LP L + + A
Sbjct: 246 YLLHISLLREYMELEFEEIADELQFEYDFERILDDFILIMFVIGNDFLPNLPDLHLNKEA 305
Query: 357 VDRLVNLYKKTV 368
L+ +K+ +
Sbjct: 306 FPLLMKTFKEAL 317
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
+D +E +E+E+ + +ED +KDRYY+ K D + YV GL WVL YY
Sbjct: 491 EDKEELDKEKETYNA--RFED-WKDRYYKEKLGFSIHDTEKLTDITENYVEGLQWVLYYY 547
Query: 453 YQGCRSWKWYFPFHYAPFASDF 474
Y+GC SW WY+ +HYAP SD
Sbjct: 548 YRGCASWGWYYHYHYAPRISDL 569
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPIIDFYP + D NGK W+ V L+ FVD
Sbjct: 589 QQLMAVLPERSKNLIPA-PFRPLMYDEKSPIIDFYPAEVDTDKNGKTADWEAVVLISFVD 647
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL A+AP KL+ +E
Sbjct: 648 EKRLQDAMAPLMSKLTPDE 666
>gi|119183089|ref|XP_001242618.1| hypothetical protein CIMG_06514 [Coccidioides immitis RS]
gi|392865522|gb|EAS31317.2| exonuclease Kem1 [Coccidioides immitis RS]
Length = 1445
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/380 (45%), Positives = 234/380 (61%), Gaps = 68/380 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH +D +P ED+M +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-KDSDSPTFRMTEDKMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AE+A+ EK + +G +P E FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTALD-----AEIAK--EKAIREGIEMPKEDP----FDSNCITPGTEFMAKLTKQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++VILS VPGEGEHKIM+YIR+ +AQPD+DPN +HCL G DADL
Sbjct: 150 FINKKVSEDAEWQGVEVILSGHEVPGEGEHKIMEYIRQAKAQPDYDPNVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IMLGL +H+P+F ++REE + NQ + ++ H+
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQNQKK----VKELEHQ--------------------- 244
Query: 295 EVEFIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L ++REYLE E L F + ER +DD++ M FFVGNDFLP+LP+L
Sbjct: 245 --NFYLLHLCIVREYLELEFQELEQEGALQFEFDMERVIDDFILMAFFVGNDFLPNLPNL 302
Query: 351 EIREGAVDRLVNLYKKTVYK 370
I EGA+ + +YK+ + K
Sbjct: 303 HINEGALAWMFKVYKEVLPK 322
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K++YYE KF D+ + YV GL WVL Y
Sbjct: 491 VKETTAEEAQQIAEKKYEQKFQEWKNKYYEGKFGWGTDNDEEMRKLTENYVQGLQWVLYY 550
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD D +F+ G QP
Sbjct: 551 YYRGVASWPWFYRYHYSPMISDVKRGLGADMDFKLG-QP 588
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF++E+RL KA+A L+ EE
Sbjct: 619 DSPIIDFYPRDFELDMNGKKMEWEAVVKIPFINEDRLLKAMASKEHLLTPEE 670
>gi|156050179|ref|XP_001591051.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980]
gi|154692077|gb|EDN91815.1| hypothetical protein SS1G_07676 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1390
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 223/376 (59%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YPS+ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E++M +AIF I+ L+ ++P++L +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + +V REK + +G +P E+ FDSN ITPGT FM +L+ L Y+
Sbjct: 102 FRTA-------LDVENAREKAIREGKEMPKEEA----FDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D W+G +++LS VPGEGEHKIM+YIR ++AQPD+DPN +HCL G DADLI
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVPGEGEHKIMEYIRLKKAQPDYDPNRRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + ++ H+ F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSKAK-SKELEHQ-----------------------NF 246
Query: 299 IFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLMHLCIVREYLELEFQELKGDGVLGFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK + K
Sbjct: 307 GALALMFKVYKTILPK 322
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 394 DVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLK 450
+V + + E+ + R +E+ F KD+YY+ KF+ + + + YV GL WVL
Sbjct: 483 EVLDVTREQAQAEMDRKYEEKFQEWKDKYYDGKFEWDRKNETELTNLCENYVQGLQWVLY 542
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYY+G SW WY+ +HY+P SD I + D NF+ G QP
Sbjct: 543 YYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLG-QP 581
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A LS E
Sbjct: 613 SPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAE 663
>gi|50312097|ref|XP_456080.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645216|emb|CAG98788.1| KLLA0F22385p [Kluyveromyces lactis]
Length = 1453
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 220/372 (59%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FF ++S ++P + Q ++G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFHFISERWPQI--------SQLIDGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + E+E+ IF ID LF ++P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G LP KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------QKAIENGDELP----KGEPFDSNAITPGTEFMAKLTENLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD++ ND W+ +KVI S VPGEGEHKIMDYIR RAQ D++PNT+HC+ G DADLI
Sbjct: 151 IHDKITNDTRWQNVKVIFSGHEVPGEGEHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL+TH+ +F ++REE G L+ + F
Sbjct: 211 ILGLSTHDHHFCLLREEV------------TFGKRSSSVKTLETQ-------------NF 245
Query: 299 IFVRLSVLREY--LEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREY LE E ++ F Y FER LDD++F+ F +GNDFLP+LP L +++GA
Sbjct: 246 FLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGA 305
Query: 357 VDRLVNLYKKTV 368
L+ +K+ +
Sbjct: 306 FPVLLQTFKEAL 317
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ K D +D + YV GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 511 WKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDV 570
Query: 475 INIAEVDTNFETGTQP 490
I + + F G QP
Sbjct: 571 IKGIDQNIEFHKG-QP 585
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI+DFYP + ++DLNGK W+ V + FVD++RL +A+APY KLS +E
Sbjct: 615 EHSPILDFYPNEVELDLNGKTADWEAVVKISFVDQKRLVEAMAPYDAKLSPDE 667
>gi|366992011|ref|XP_003675771.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
gi|342301636|emb|CCC69407.1| hypothetical protein NCAS_0C04170 [Naumovozyma castellii CBS 4309]
Length = 1488
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 221/372 (59%), Gaps = 58/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF ++P+K YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFLTIKPKKTFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + +K + G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEHAL-------QKAIDHGEEIP----KGEPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ I +I S VPGEGEHKIMD+IR+ A+ D D NT+HC+ G DADLI
Sbjct: 151 IHDKISNDAKWREIDIIFSGHEVPGEGEHKIMDFIRRITAEKDFDENTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL+TH P+F ++REE V G+ N V T ++ F
Sbjct: 211 ILGLSTHAPHFALLREEV---------VFGRR--------------NSNKVKTLENQ-NF 246
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREY+E E + + FP+ FER LDD++ + F +GNDFLP+LP L + +GA
Sbjct: 247 YLLHLSLLREYMELEFSEIADEMQFPFDFERVLDDFILVMFVIGNDFLPNLPDLHLNKGA 306
Query: 357 VDRLVNLYKKTV 368
++ +K+ +
Sbjct: 307 FPVILQTFKEAL 318
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPIIDFYP + K+D+NGK W+ V LL FVDE+RL +A+ PY K + EE
Sbjct: 615 EKSPIIDFYPSEVKLDMNGKTADWEAVVLLSFVDEKRLVEAMKPYLSKFTPEE 667
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGH 439
G R + +S+ + +E E L+++ F K YY+ K + + + +
Sbjct: 476 AGLRKIIKSYQQAVLVEDADELEKEKGLYDERFENWKHDYYKDKLGFKTNQEESVVSLTN 535
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
YV GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 536 NYVEGLQWVLYYYYRGCPSWGWYYHYHYAPRISDL 570
>gi|410730385|ref|XP_003671372.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
gi|401780190|emb|CCD26129.2| hypothetical protein NDAI_0G03520 [Naumovozyma dairenensis CBS 421]
Length = 1548
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/373 (43%), Positives = 224/373 (60%), Gaps = 60/373 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF+ ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFTYIDHLFQTIKPKKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + +K L +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAENAL-------QKALENGEEIP----KGEPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH++++ND W+ +++I S PGEGEHKIMD+IR RAQ D NT+HC+ G DADLI
Sbjct: 151 IHEKISNDAQWREVEIIFSGHEAPGEGEHKIMDFIRTLRAQKGFDHNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL+TH P+F ++REE V G+ NP T ++ F
Sbjct: 211 ILGLSTHAPHFALLREEV---------VFGRR--------------NPNQAKTLENQ-NF 246
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F + FER LDD+V + F +GNDFLP+LP L + +G
Sbjct: 247 YLLHLSLLREYMELEFKEIA-DEMQFEFDFERVLDDFVLVMFVIGNDFLPNLPDLHLNKG 305
Query: 356 AVDRLVNLYKKTV 368
A L+ +K+ +
Sbjct: 306 AFVVLLQTFKEAL 318
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPI+DFYP + K+D NGK W+ V LLPFVDE RL A+ PY KLS EE
Sbjct: 617 SPILDFYPTEVKLDKNGKTADWEAVVLLPFVDETRLIDAMKPYLSKLSPEE 667
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 403 ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFR-------LMVGHEYVLGLCWVLKYYYQG 455
E DE++ +D + R+ K D KD + F+ + YV GL WVL YYY+G
Sbjct: 492 EDADELQREQDLYNTRFESWKKDYYKDKLGFKADIEENITKLTKNYVEGLQWVLYYYYRG 551
Query: 456 CRSWKWYFPFHYAPFASDF 474
C SW WY+ +HYAP SD
Sbjct: 552 CPSWGWYYRYHYAPRISDL 570
>gi|322812519|pdb|3PIE|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812520|pdb|3PIE|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812521|pdb|3PIE|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812522|pdb|3PIE|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant
gi|322812523|pdb|3PIF|A Chain A, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812524|pdb|3PIF|B Chain B, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812525|pdb|3PIF|C Chain C, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
gi|322812526|pdb|3PIF|D Chain D, Crystal Structure Of The 5'->3' Exoribonuclease Xrn1,
E178q Mutant In Complex With Manganese
Length = 1155
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 220/372 (59%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FF ++S ++P + Q ++G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFHFISERWPQI--------SQLIDGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + E+E+ IF ID LF ++P++ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGDGSEVNSRLSEEEVYSKIFSYIDHLFHTIKPKQTFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G LP KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------QKAIENGDELP----KGEPFDSNAITPGTEFMAKLTENLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD++ ND W+ +KVI S VPGEG+HKIMDYIR RAQ D++PNT+HC+ G DADLI
Sbjct: 151 IHDKITNDTRWQNVKVIFSGHEVPGEGQHKIMDYIRAIRAQEDYNPNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL+TH+ +F ++REE G L+ + F
Sbjct: 211 ILGLSTHDHHFCLLREEV------------TFGKRSSSVKTLETQ-------------NF 245
Query: 299 IFVRLSVLREY--LEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREY LE E ++ F Y FER LDD++F+ F +GNDFLP+LP L +++GA
Sbjct: 246 FLLHLSILREYLALEFEEITDSVQFEYDFERVLDDFIFVLFTIGNDFLPNLPDLHLKKGA 305
Query: 357 VDRLVNLYKKTV 368
L+ +K+ +
Sbjct: 306 FPVLLQTFKEAL 317
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ K D +D + YV GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 491 WKDQYYKDKLDFSINDTDSLKEMTENYVGGLQWVLYYYYRGCPSWSWYYRYHYAPRISDV 550
Query: 475 INIAEVDTNFETGTQP 490
I + + F G QP
Sbjct: 551 IKGIDQNIEFHKG-QP 565
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP + P + SPI+DFYP + ++DLNGK W+ V + FVD
Sbjct: 570 QQLMAVLPERSKNLIPV-VYRPLMYDEHSPILDFYPNEVELDLNGKTADWEAVVKISFVD 628
Query: 698 EERLHKALAPYYEKLSVEE 716
++RL +A+APY KLS +E
Sbjct: 629 QKRLVEAMAPYDAKLSPDE 647
>gi|384488412|gb|EIE80592.1| 5'-3' exoribonuclease 1 [Rhizopus delemar RA 99-880]
Length = 1739
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/326 (46%), Positives = 211/326 (64%), Gaps = 40/326 (12%)
Query: 47 EFDNLYLDMNGIIHPCTHP-EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
EFDNLYLDMNGI+H C+H D P + E+++ IF+ +D LF ++P+KL ++AIDG
Sbjct: 504 EFDNLYLDMNGIVHNCSHNNSDDPHYRITEEQIWRGIFQYMDHLFSKIKPKKLFFVAIDG 563
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAPRAKMNQQRSRRFR +K+ + R+K LA G LP + FD+NCITPG
Sbjct: 564 VAPRAKMNQQRSRRFRTAKDAEDA-------RQKALAKGEELPEQDP----FDTNCITPG 612
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FM +L+ L Y+I +++ D W+ +++ILS VPGEGEHKIM+YIR +AQPD++P
Sbjct: 613 TEFMIKLTQQLRYFISKKVSEDADWRNVQIILSGPEVPGEGEHKIMEYIRLAKAQPDYNP 672
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
NT+HCL G DADL+MLGL +H+P+F ++REE G K+ +GLD +
Sbjct: 673 NTRHCLYGLDADLLMLGLLSHDPHFALLREEV------------TFGRNQKKKIGLDNQ- 719
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGND 342
F + L ++REYL+ E + LPFPY FER +DD++ + F+GND
Sbjct: 720 ------------NFYLLHLCLIREYLDMEFSALKTTLPFPYDFERVVDDFILLALFIGND 767
Query: 343 FLPHLPSLEIREGAVDRLVNLYKKTV 368
FLPHLP++ I EGA+ + +YK+T+
Sbjct: 768 FLPHLPNIHINEGALGLMFKIYKETL 793
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
+D+D E+E + + +K YY+ K ++ +D + YV+G+ WVL+YY
Sbjct: 979 EDIDREQIEKEEKAQFEAAFEQWKAEYYKDKMNIDINDSQEMEKLIGSYVIGIQWVLQYY 1038
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFILYHFDNKMF 509
Y G SW W++P+HYAP SD NI + T QP L +L K+
Sbjct: 1039 YNGVASWGWFYPYHYAPKISDLTNIVRFQDHTFTLGQPFKPYEQLMGVLPMLSKKLL 1095
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP DF +D+NGKK +W+ + +PF+DE+RL A+ +L+ +E E
Sbjct: 1108 SPIIDFYPTDFDMDMNGKKQSWEAIVKIPFIDEKRLLDAMKSREHRLTKDERE 1160
>gi|426199678|gb|EKV49603.1| hypothetical protein AGABI2DRAFT_184268 [Agaricus bisporus var.
bisporus H97]
Length = 1454
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 211/345 (61%), Gaps = 51/345 (14%)
Query: 29 VNGQKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECI 85
V ++ P S N + EFDNLYLD NGIIH C+HP D+ A ED++ +IF +
Sbjct: 14 VGRERYPLTSQLIQENKIPEFDNLYLDFNGIIHNCSHPNDEDAHFRLSEDQIFTSIFAYV 73
Query: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCI 145
D LF ++P+KL +MA+DGVAPRAKMNQQRSRRFR +KE + +REK G
Sbjct: 74 DHLFGKIKPKKLFFMAVDGVAPRAKMNQQRSRRFRTAKEAKD-------VREKAEKKGEK 126
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
LP EK FDSNCITPGT FMARLS L Y+++ +++ D W+ I+V+LS VPGEG
Sbjct: 127 LPDEKA----FDSNCITPGTLFMARLSEQLRYFVNKKISEDANWRDIEVVLSGHEVPGEG 182
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIM+YIR RAQPD++PN +HCL G DADLIMLGL +H+P+F ++REE
Sbjct: 183 EHKIMEYIRLSRAQPDYNPNIRHCLYGLDADLIMLGLLSHDPHFCLLREEV--------- 233
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL--AMPNLPFPY 323
N ESV F + L ++REYL+ E LPF Y
Sbjct: 234 -------------------NLESV-------NFYLLHLCLMREYLDLEFRDIESTLPFGY 267
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
S ER +DD++ + FVGNDFLP+LP L I E +++L +YKK +
Sbjct: 268 SLERVIDDFILLAVFVGNDFLPNLPDLHIHENGLEKLFEVYKKVL 312
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF 415
AVDR++N Y K EE GG FD E S E+ ++ W+ G
Sbjct: 510 AVDRVLNKYDKA-----PAFDDEEGGG---------FDARHERSIREKMDE----WKRG- 550
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
YY+ K ++ DD + + YV GL WV+ YYY G SW W++ +HYAP SD
Sbjct: 551 ---YYQGKMEISYDDPKGMGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRISDLR 607
Query: 476 NIAEVDTNFETGT 488
+ ++ NFE GT
Sbjct: 608 GVDKMTFNFELGT 620
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPI+DFYP +F+ DLNGKK W+ + +PF+DE RL KA+A +L+ EE
Sbjct: 652 NSPILDFYPVEFESDLNGKKAEWEAIVKIPFIDEVRLLKAMATREHRLTTEE 703
>gi|354545919|emb|CCE42648.1| hypothetical protein CPAR2_202910 [Candida parapsilosis]
Length = 1481
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 160/385 (41%), Positives = 227/385 (58%), Gaps = 64/385 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q V+ ++IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLI--------SQLVDEKQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D + +D+M AIF ID LF I++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + E AE+ +K + +G LP E FDSN ITPGT FMA+L+ L Y++
Sbjct: 102 RTAYE-----AEINL--KKAIENGDELPKE----DPFDSNSITPGTEFMAKLTENLKYFV 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++ D W I+++LS VPGEGEHKI ++IR R+Q D+DPN +HC+ G DADLIM
Sbjct: 151 HKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDDYDPNLRHCIYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
LGL +H+P+F ++REE + + P DV Q
Sbjct: 211 LGLVSHDPHFALLREEVTFGNRKTSSGPKDVTDQ-------------------------- 244
Query: 296 VEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+F + LS++REYLE E + F Y FE+ LDD++ + + +GNDFLPHLP L +
Sbjct: 245 -KFYLLHLSLVREYLELEFKEVEEQVDFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQE 378
+GA L++ +K+++ ++ + +E
Sbjct: 304 KGAFPLLLSTFKQSLLQSDGYINEE 328
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 37/59 (62%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+K+ YYE K P DD + + YV GL WVL YYY+GC SW +Y+ +HYAP SD
Sbjct: 514 WKNNYYEEKLHFPIDDKEKLIEMTEHYVEGLQWVLYYYYRGCPSWNFYYKYHYAPRISD 572
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 645 MAAQSTKAPSFIPGGQF---APQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
MA ++ +P + + SPIIDFYP + ID+NGK +W+ V LL FVDE++L
Sbjct: 602 MAVLPARSKKLMPAAYWPLMTDEKSPIIDFYPHEVDIDMNGKTASWEAVVLLDFVDEKKL 661
Query: 702 HKALAPYYEKLSVEESE 718
AL P KL+ +E++
Sbjct: 662 LDALKPIESKLTPQETK 678
>gi|156839563|ref|XP_001643471.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114083|gb|EDO15613.1| hypothetical protein Kpol_1006p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 1292
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 229/388 (59%), Gaps = 62/388 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++ ++P +I+ +E N N EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYICERWP-LILQLIE------------------NDNVPEFDNLYLDMNSILH 41
Query: 61 PCTH-----PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
C+H E P E+E+ IF ID LF++++P+K+ YMAIDGVAPRAKMNQQR
Sbjct: 42 SCSHGDRGDTEGIIKPLTEEEIFTRIFIYIDHLFQLIKPKKVFYMAIDGVAPRAKMNQQR 101
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRRFR + E + + K++ +G ++ E + FD N ITPGT FM +L+ L
Sbjct: 102 SRRFRTAMENEKAM-------NKIIENGGVISEEIKP---FDPNAITPGTTFMEKLTKYL 151
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+IHD+++ND W I++ILS VPGEGEHKIMDYIRK+R+Q ++PN +HC+ G DA
Sbjct: 152 KYFIHDKISNDINWANIEIILSGHEVPGEGEHKIMDYIRKKRSQKGYNPNLRHCIYGLDA 211
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLI+LGL+TH P+F I+REE + + GL+ +
Sbjct: 212 DLIILGLSTHAPHFAILREEVTFTKTLK-----------NKKTGLELQ------------ 248
Query: 296 VEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F F++LS+LREYLE E L + Y FER LDD++ + F +GNDFLP+LP L +
Sbjct: 249 -RFYFLQLSLLREYLELEFKDIANKLKYKYDFERILDDFILILFVIGNDFLPNLPDLHLN 307
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQEENG 381
+GA ++ +K ++ ++ + ENG
Sbjct: 308 KGAFPVILETFKLSLLSSEGYIN--ENG 333
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ IP F P QDSPI+DFYP + K+D NGK W+ V L+ FVD
Sbjct: 593 QQLMAVLPERSKELIPT-IFRPLMYNQDSPILDFYPSEVKLDRNGKSADWEAVVLISFVD 651
Query: 698 EERLHKALAPYYEKL 712
+ERL A+ P + L
Sbjct: 652 QERLVAAMEPLLKDL 666
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
K YY K + D + YV GL WV+ YYY+GC SW W++ +HYAP SD
Sbjct: 515 KSSYYLRKLSIDITDEEKVTDLAKNYVEGLQWVMYYYYRGCASWGWFYRYHYAPRISD 572
>gi|307194446|gb|EFN76744.1| 5'-3' exoribonuclease 1 [Harpegnathos saltator]
Length = 1642
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 166/368 (45%), Positives = 221/368 (60%), Gaps = 59/368 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S ++P C+ + +E ++P EFD LYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERHP-----CLSETIKEY---QMP-----------EFDYLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D ED + IF I+ LF ++RP+KL +MAIDGVAPRAK+NQQRSRR
Sbjct: 42 ACSHPNDSDVHFRISEDTIFNNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR +K+ AEV K+ G ++P EK+ FDSNCITPGT FMA L+ L+ +
Sbjct: 102 FRTAKD-----AEVQEANAKI--HGLVIPTEKK----FDSNCITPGTFFMAELTRRLNRF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ D WK KV+ S + VPGEGEHKIMD+IR +A D+D N++HCL G DADLI
Sbjct: 151 IVHKISIDDTWKKCKVLFSGSEVPGEGEHKIMDFIRHMKASKDYDFNSRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HEPNF+++REE K G + K+ I E +F
Sbjct: 211 MLGLCSHEPNFSLLREEVK------------FGKKQKK-------------IQTPEETKF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS+LREY++ E + + FPY E+ +DDWV M F VGNDF+PHLP+L I GA
Sbjct: 246 CLLHLSLLREYIDHEFSPVKDKISFPYDIEKIIDDWVLMGFLVGNDFIPHLPNLHITSGA 305
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 306 LPILYRAY 313
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+DSPII +YP DFK DLNGK+ W+ V L+PF+DE+ L A+ P+ KL+ EE +
Sbjct: 539 KDSPIISYYPTDFKTDLNGKQQEWEAVVLIPFIDEKLLLAAMQPHLSKLTPEEKQ 593
>gi|390353506|ref|XP_003728123.1| PREDICTED: 5'-3' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 1915
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/373 (45%), Positives = 214/373 (57%), Gaps = 62/373 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP C+ + V +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWQSERYP-----CLSEV---VKENQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTHP D E++M +IF I+ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 TCTHPNDDDVHFRMTEEDMFKSIFHYIEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ E E+ E R G LP EK FDSNCITPGT FM RL L Y+
Sbjct: 102 FRSALEAEEREKEAVR-------KGETLPDEKR----FDSNCITPGTDFMVRLQRQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ ++ D W+GI++ LS PGEGEHKIMD+IR ++AQ +HDPNT+HCL G DADLI
Sbjct: 151 VNTKITEDSKWQGIRIFLSGHETPGEGEHKIMDFIRAEKAQKEHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
MLGL +HEP+F+++REE F RP V E
Sbjct: 211 MLGLISHEPHFSLLREEVRFGKQAKRPTTV---------------------------EET 243
Query: 297 EFIFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + LS+ REYL E A+ + + E +DDWV + F VGNDF+P+LP L I
Sbjct: 244 TFHLLHLSLFREYLALEFSAVKDQIDWFDAECIIDDWVLLGFLVGNDFVPNLPDLHISHS 303
Query: 356 AVDRLVNLYKKTV 368
A+ L Y K +
Sbjct: 304 ALPLLYKTYIKVL 316
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPI+++YP +F+ DLNGK AW+ V L+PF+DE RL + Y +KL+ E
Sbjct: 506 ENSPILEYYPLEFEQDLNGKLQAWEAVVLIPFIDENRLWAGMKMYEDKLTEAE 558
>gi|255955773|ref|XP_002568639.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590350|emb|CAP96529.1| Pc21g16320 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1390
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 172/386 (44%), Positives = 230/386 (59%), Gaps = 80/386 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ + + + IP EFD+LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAISMLIADSR--------IP-----------EFDSLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ LF ++P+KL YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHSDSDSPTFRMTEDQMFIAIFNYIEHLFGKIKPKKLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE A+ EK + G +P E FDSNCITPGT FM +L+ L Y+
Sbjct: 102 FRTALD-----AENAK--EKAIQQGLEMPKEDP----FDSNCITPGTEFMQKLTKQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR +AQPD++ N +HCL G DADLI
Sbjct: 151 INKKISEDTDWQGVEIVLSGHEVPGEGEHKIMEYIRCSKAQPDYESNVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE- 297
MLGL +H+P+F ++REE +TFG +V
Sbjct: 211 MLGLLSHDPHFCLLREE----------------------------------VTFGRQVSK 236
Query: 298 ---------FIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFL 344
F + LSV+REYLE E L FP+ ER +DD++ M FFVGNDFL
Sbjct: 237 KPKELEHQNFYLLHLSVVREYLELEFQELEQEGVLDFPFDMERVIDDFILMAFFVGNDFL 296
Query: 345 PHLPSLEIREGAVDRLVNLYKKTVYK 370
P+LP+L I EGA+ + LYK+ + K
Sbjct: 297 PNLPNLHINEGALALMFKLYKEVLPK 322
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD YY +KF D+ + YV GL WVL YYY+G SW W+F +HYAP SD
Sbjct: 506 WKDNYYRTKFGWGLDNKEEMKKLARNYVQGLQWVLFYYYRGIASWPWFFQYHYAPMISDV 565
Query: 475 INIAEVDTNFETG 487
+ + D NF+ G
Sbjct: 566 NDGLDADMNFKLG 578
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPI DFYP DF +D+NGKK W+ V +PF+DE+RL AL +LS +E
Sbjct: 611 DSPIYDFYPRDFDLDMNGKKMEWEAVVKIPFIDEKRLLDALKTKENQLSADE 662
>gi|156097196|ref|XP_001614631.1| exoribonuclease [Plasmodium vivax Sal-1]
gi|148803505|gb|EDL44904.1| exoribonuclease, putative [Plasmodium vivax]
Length = 1353
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/429 (39%), Positives = 236/429 (55%), Gaps = 70/429 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSS--------------------- 39
MGVP F+RWL +YP + E + +V ++
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHRDGHRDGHRDGEGKATYRVP 60
Query: 40 --------------KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
N NG FDNLYLDMNGIIH C+H ++ K +E+ + IF I
Sbjct: 61 DLSDYVNNTDETHCSDNINGY-FDNLYLDMNGIIHLCSHSDNSKRAKSNEEIFLNIFLYI 119
Query: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCI 145
+RLF I+ P+KLLYMAIDGVAP+AKMNQQRSRRF++ + + ++REK L++ +
Sbjct: 120 ERLFDIIEPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIQLREKFLSENRV 179
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
+P E+ + +DSN ITPGT FM LS L Y++ ++ ND WK I VI SDANV GEG
Sbjct: 180 VP---EEFTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDANVCGEG 236
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE----------- 254
EHKI ++I+ QRAQP +DPNT+H + G DADLIML LA+HEP F I+RE
Sbjct: 237 EHKIFNFIKSQRAQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEK 296
Query: 255 --------EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV-------ITFGSEVEFI 299
K Q P +C + K +P+ ++ I + E
Sbjct: 297 VQNKDFVGMLKSKQDLP--LCTTHMRKTKRMYTKYNDPHYANISRSHNCLINSENWNELQ 354
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
+ L++LREYL K+ + Y+ ER +DD++F+CF GNDFLPHLPS+ I G++D+
Sbjct: 355 ILDLTILREYLSKDFFFDST---YNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQ 411
Query: 360 LVNLYKKTV 368
LV LY+K +
Sbjct: 412 LVLLYQKVL 420
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 395 VDESSEEEESNDEVRLWEDG----FKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWV 448
+ +++E E ++V L D + +YY+SKF + + D F V ++Y+ GL WV
Sbjct: 675 IKKANECENPKEDVELGGDENPELIRIKYYKSKFHLDETDYVDDFVKEVVYKYIEGLAWV 734
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
L YY+Q C W WY+P++YAP +SD I I V+ F+
Sbjct: 735 LSYYFQSCPMWHWYYPYYYAPLSSDLI-IDNVNFTFQ 770
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP+ FK + NGKK+ +Q V LLPFVD+ER+ K + L+ EE
Sbjct: 804 HDSPIIDFYPKTFKEEENGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEE 856
>gi|123477106|ref|XP_001321722.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121904554|gb|EAY09499.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 702
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 267/503 (53%), Gaps = 87/503 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNG---MEFDNLYLDMNG 57
MGVP+FFRWL YP ++ C+E + E D S+PNPN +EFDNLYLDMNG
Sbjct: 1 MGVPSFFRWLKGHYPLLLSQCIETELDE--------DPSQPNPNTEGDVEFDNLYLDMNG 52
Query: 58 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
+IHPC HP+++ PK E+ + + +DR+F +VRPRK+L+MA+DGVAPRAKMNQQR R
Sbjct: 53 LIHPCYHPKNQEHPKTYLEVFQNVEKYVDRIFNLVRPRKVLFMAVDGVAPRAKMNQQRIR 112
Query: 118 RFRASKETA----EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
RF A+K++ + +++ +E++ I+ P+ S D+N ITPGT FM +LS
Sbjct: 113 RFCAAKDSEYNRYMQCQDLSITKEEIDE---IMDPQTIIQS--DTNTITPGTEFMMQLSD 167
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
+ I+ + P W I VI SDA+VPGEGEHKIM++IR QR + ++D + HC+ G
Sbjct: 168 YITEMINRKQKTSPAWSNIAVIFSDASVPGEGEHKIMEFIRSQRVEFNYDFSRHHCVYGL 227
Query: 234 DADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DAD + LGL+ HE FTI+REE F P G+ G
Sbjct: 228 DADFLFLGLSCHELFFTILREEVFNVENLTP--PAGRFG--------------------- 264
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+F+F V R+YLE++L + F + FERALDD +F+C GNDFLP +P + I
Sbjct: 265 --PAKFLFANGFVFRQYLERDLKPAKMGFDWYFERALDDIIFLCVTAGNDFLPQIPGMNI 322
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSE------------ 400
G++ ++ LYKK + + + +NG + + + +S E
Sbjct: 323 LGGSIGKIFELYKKILPELGGYIT--DNGNVDCKRAAKFLHSLVDSEEIALQGIMNPSNL 380
Query: 401 -EEESNDEVRLWEDGF--------------------------KDRYYESKFDVPKDDIAF 433
+E S + +++++ + + RYY+ K + D+
Sbjct: 381 SKEASINTNKIYQNDYSQIEKVPRPISSEITLEKPDDAFENLQQRYYKEKHGFDEKDVEK 440
Query: 434 RLMVGHEYVLGLCWVLKYYYQGC 456
V Y+ G+ W L+YY GC
Sbjct: 441 VKDVCINYLKGMAWTLQYYLHGC 463
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 659 GQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
+ + SP+ +YP F ID+ G W+G+ +P +D E L K L
Sbjct: 523 AELMKKGSPLEKYYPTTFSIDMMGGHQPWKGITFIPIIDGEFLEKTL 569
>gi|326429495|gb|EGD75065.1| hypothetical protein PTSG_06722 [Salpingoeca sp. ATCC 50818]
Length = 1402
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/373 (44%), Positives = 224/373 (60%), Gaps = 55/373 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P ++RW+S +YP C+ Q V ++P +FDNLYLDMNGIIH
Sbjct: 1 MGIPKYYRWISERYP-----CLS---QVVRESEVP-----------DFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+HP D + E++M I I+ LFRI+RP+++ YMAIDG APRAKMNQQR+RRF
Sbjct: 42 TCSHPSDDVNFRLTEEKMFEDICAYIETLFRIIRPQRVFYMAIDGCAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R++KE E R+K +G +L + + FDSNCITPGTPFM RL L Y++
Sbjct: 102 RSAKEAEEA-------RQKAEREGKLLD-DPDAPPPFDSNCITPGTPFMHRLHQHLEYFV 153
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++ +DP W+G++V+LS VPGEGEHKIMD+IR ++ + D+D NT+HCL G DADLI+
Sbjct: 154 QAKITSDPAWQGLRVVLSGHQVPGEGEHKIMDFIRSEKLRDDYDANTRHCLYGLDADLII 213
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGL +HEP+F+++REE + G K D++ N F
Sbjct: 214 LGLVSHEPHFSLLREEVR------------FGRRQKS--KKDSQDN-----------VFH 248
Query: 300 FVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ LS+ REYL E P L FP+ FER LDDWV + F +GNDF+PHLP I + V
Sbjct: 249 LLSLSLYREYLRMEFFDVKPLLSFPFDFERLLDDWVLLGFLIGNDFIPHLPHFHISQDIV 308
Query: 358 DRLVNLYKKTVYK 370
L + YK + K
Sbjct: 309 PTLYSSYKLALQK 321
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 42/73 (57%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY K V + D FRL EYV GL W+L YYY+G SW W+FP HYAPF SD
Sbjct: 463 YKANYYLEKLGVQRYDDEFRLSQAQEYVRGLQWILFYYYKGVPSWSWFFPSHYAPFVSDI 522
Query: 475 INIAEVDTNFETG 487
I + FE G
Sbjct: 523 RAIEDFKPEFELG 535
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
SPIIDFYP+ FK DLNGK+ AW+ V L+PF+D++RL A+
Sbjct: 569 SPIIDFYPQTFKTDLNGKRNAWEAVVLIPFIDQDRLLSAV 608
>gi|395528095|ref|XP_003766167.1| PREDICTED: 5'-3' exoribonuclease 1 [Sarcophilus harrisii]
Length = 1695
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 201/322 (62%), Gaps = 39/322 (12%)
Query: 47 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 13 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 72
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAPRAKMNQQR RRFRA+KE +KI +K L G ILP E + FDSNCITPG
Sbjct: 73 VAPRAKMNQQRGRRFRAAKEAEDKI-------KKALEKGEILPTE----ARFDSNCITPG 121
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FMARL L Y+++ ++++D W+G+ + LS PGEGEHKIM++IR ++ +PDHDP
Sbjct: 122 TEFMARLHEHLKYFVNMKISSDKSWQGVTIYLSGHETPGEGEHKIMEFIRSEKGKPDHDP 181
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
N +HCL G DADLIMLGL +HE +F+++REE + + VC
Sbjct: 182 NIRHCLYGLDADLIMLGLTSHESHFSLLREEVRFGGKKTQRVCA---------------- 225
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGND 342
PE E F + LS++REY++ E + + F Y ER +DDW+ M F VGND
Sbjct: 226 -PE-------ETTFHLLHLSLMREYIDYEFSALKDKISFKYDIERIIDDWILMGFLVGND 277
Query: 343 FLPHLPSLEIREGAVDRLVNLY 364
F+PHLP L I A+ L Y
Sbjct: 278 FIPHLPHLHINHDALPLLYRTY 299
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 417 YKRTYYMTKMGVEIVSDDFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 476
Query: 475 INIAEVDTNFETG 487
NI+E+ FE G
Sbjct: 477 RNISELKIQFELG 489
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ + L EE
Sbjct: 521 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDETRLLQAMESCNKYLKEEE 573
>gi|83317292|ref|XP_731098.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491026|gb|EAA22663.1| Drosophila melanogaster CG10354 gene product-related [Plasmodium
yoelii yoelii]
Length = 1286
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/428 (41%), Positives = 234/428 (54%), Gaps = 68/428 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV---------NGQ------------KIPFDSS 39
MGVP F++WL +YP + E + +V NG+ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 40 KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 99
N NG FDN+YLDMNGIIH C+H + K ++E+ + IF I+RLF I+ P+KLLY
Sbjct: 61 SDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSN 159
MAIDGVAP+AKMNQQRSRRF++ + + +R K L++ +P E H+DSN
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVPDE---FHHWDSN 176
Query: 160 CITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
ITPGT FM LS L Y+I ++ ND WK I VI SDANV GEGEHKI ++I+ QRAQ
Sbjct: 177 IITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIKSQRAQ 236
Query: 220 PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR--------EEFKP------------- 258
+DPNT+H + G DADLIML LA+HEP F I+R EE KP
Sbjct: 237 KGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDKYVGVFKGK 296
Query: 259 ------------NQARPCDVCGQMGHEMKECVGLD----AEPNPESVITFGSE--VEFIF 300
N + D G + K C D A N S + E E
Sbjct: 297 GDLQYCTKFLRNNNSTTIDGNNNKG-KKKYCNKYDDRNYANINISSTCSINYENWNELQI 355
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ LS+LREYL K+ Y+ ER +DD++F+CF GNDFLPHLPS+ I G++D+L
Sbjct: 356 LDLSILREYLYKDFF---FDTKYNLERCIDDFIFICFLCGNDFLPHLPSISIASGSIDQL 412
Query: 361 VNLYKKTV 368
+ LY+K +
Sbjct: 413 LLLYQKVL 420
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 7/97 (7%)
Query: 395 VDESSEEEESNDEVRLWEDG----FKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWV 448
V +++E E ++V L D + RYY+SKF + + D F V ++Y+ GL WV
Sbjct: 676 VKKANECENPKEDVELGADDDPNDLRTRYYKSKFHLDESDNVDEFVQEVVYKYIEGLAWV 735
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
L YY+Q C W WY+P++YAP +SD + I +++ +FE
Sbjct: 736 LCYYFQECPMWHWYYPYYYAPLSSDLL-IKDINISFE 771
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+SPI+DFYP+ FK + NGKKF +Q + LLPFV++ER+
Sbjct: 805 NESPIVDFYPKTFKEEENGKKFKYQWIVLLPFVEKERI 842
>gi|307180136|gb|EFN68180.1| 5'-3' exoribonuclease 1 [Camponotus floridanus]
Length = 1644
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/367 (46%), Positives = 222/367 (60%), Gaps = 59/367 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEVIKE---HQIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+HP D + E+++ IF I+ LF ++RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDVCFRISEEDIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AEV + K A G +P EK FDSNCITPGT FMA+L L ++
Sbjct: 102 RAAKD-----AEVQEAKAK--AKGLEIPKEKR----FDSNCITPGTLFMAKLGEQLKLFV 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+++ D WK K++ S + VPGEGEHKIMDYIR +A D++ N++HCL G DADLIM
Sbjct: 151 EYKVSMDDTWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKDYNCNSRHCLYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGL +HEPNF+++REE K G K+ V + E E +F
Sbjct: 211 LGLCSHEPNFSLLREEVK------------FG---KQQVKMTPE-----------ETKFC 244
Query: 300 FVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ LS+LREY+E E + L FP+ E+ +DDWV M F VGNDF+PHLP+L I GA+
Sbjct: 245 LLHLSLLREYIEHEFSPIKDKLLFPFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIANGAL 304
Query: 358 DRLVNLY 364
L Y
Sbjct: 305 PILYRAY 311
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII++YP DFK DLNGKK W+ V L+PF+DE+ L A+ P+ KL+ +E
Sbjct: 545 ESSPIINYYPHDFKTDLNGKKQEWEAVVLIPFIDEKLLVAAMQPHLSKLTADE 597
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
K YY +K + D YV + W L YYY GC SW WY+P HYAP+ SD
Sbjct: 442 KRDYYMNKLEYKNVDAEVLRSQAEGYVRAIQWNLGYYYHGCCSWSWYYPHHYAPYISDIK 501
Query: 476 NIAEVDTNFETG 487
+ ++ FE G
Sbjct: 502 DFKDLKLEFELG 513
>gi|392350257|ref|XP_003750606.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Rattus
norvegicus]
Length = 453
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/322 (46%), Positives = 200/322 (62%), Gaps = 39/322 (12%)
Query: 47 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
EFDNLYLDMNGIIH C+HP D +D++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAPRAKMNQQR RRFR++KE +KI +K + G LP E + FDSNCITPG
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPG 111
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FMARL L Y+++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDP
Sbjct: 112 TEFMARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDP 171
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
NT+HCL G DADLIMLGL +HE +F+++REE + + VC
Sbjct: 172 NTRHCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA---------------- 215
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGND 342
PE E F + LS++REY++ E + + F Y E+ +DDW+ M F VGND
Sbjct: 216 -PE-------ETTFHLLHLSLMREYIDYEFSALKEKITFKYDIEKIIDDWILMGFLVGND 267
Query: 343 FLPHLPSLEIREGAVDRLVNLY 364
F+PHLP L I A+ L Y
Sbjct: 268 FIPHLPHLHINHDALPLLYGTY 289
>gi|448526146|ref|XP_003869280.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis Co 90-125]
gi|380353633|emb|CCG23144.1| Kem1 5'-->3' exoribonuclease [Candida orthopsilosis]
Length = 1465
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/378 (41%), Positives = 224/378 (59%), Gaps = 64/378 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q ++ ++IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLI--------SQLIDEKQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D + +D+M AIF ID LF I++P+K YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDGSITRISDDQMYAAIFNYIDHLFSIIKPKKTFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + E AE+ +K + +G LP E FDSN ITPGT FMA+L+ L Y++
Sbjct: 102 RTAYE-----AEINL--KKAIENGDELPKE----DPFDSNSITPGTEFMAKLTENLKYFV 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++ D W I+++LS VPGEGEHKI ++IR R+Q +DPN +HC+ G DADLIM
Sbjct: 151 HKKITEDSRWANIEIVLSGHEVPGEGEHKIQEFIRAVRSQDGYDPNLRHCIYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEF----KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
LGL +H+P+F ++REE + + + P DV Q
Sbjct: 211 LGLVSHDPHFALLREEVTFGNRKSSSGPKDVTDQ-------------------------- 244
Query: 296 VEFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+F + LS++REYLE E + F Y FE+ LDD++ + + +GNDFLPHLP L +
Sbjct: 245 -KFFLLHLSLVREYLELEFKEVEEQISFEYDFEKVLDDFILIMYVIGNDFLPHLPDLHLN 303
Query: 354 EGAVDRLVNLYKKTVYKT 371
+GA L++ +K+++ ++
Sbjct: 304 KGAFPLLISTFKQSLLQS 321
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 414 GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+K+ YYE K + D+ + Y+ GL WVL YYY+GC SW +Y+ +HYAP SD
Sbjct: 513 SWKNNYYEEKLNFSIDNKEKLTEMTEHYIEGLQWVLYYYYRGCPSWNFYYRYHYAPRISD 572
Query: 474 F-INIAE-----VDTNFE 485
+ + E VD FE
Sbjct: 573 ISVGLEELIKKGVDITFE 590
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPII FYP + ID+NGK +W+ V LL FVDE++L AL P KL+ EE++
Sbjct: 624 EKSPIIGFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLLDALKPIESKLTPEETK 678
>gi|448107259|ref|XP_004205309.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|448110212|ref|XP_004201573.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359382364|emb|CCE81201.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
gi|359383129|emb|CCE80436.1| Piso0_003552 [Millerozyma farinosa CBS 7064]
Length = 1508
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/387 (42%), Positives = 224/387 (57%), Gaps = 65/387 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q ++G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLI--------SQLIDGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D + ED+M AIF I+ LF I++P K+ YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 TCTHSNDDTLVRMTEDQMYAAIFTYIEHLFEIIKPNKVFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + E + +K + DG +P E FDSN ITPGT FMA+L+ L Y+I
Sbjct: 102 RTAYEAELNL-------KKAIQDGAEIPKE----DPFDSNAITPGTEFMAKLTDNLKYFI 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++ D W +++ILS VPGEGEHKIM+YIR + QPD +PN +HC+ G DADLIM
Sbjct: 151 HKKITEDSRWANVQIILSGHEVPGEGEHKIMEYIRTMKNQPDAEPNLRHCIYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREE--FKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LGL +H P+F ++REE F P +Q + D+ Q
Sbjct: 211 LGLVSHYPHFALLREEVTFGPRSQKKSSDINDQ--------------------------- 243
Query: 297 EFIFVRLSVLREYLEKEL--AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+F + LS+LREYL E L F Y+FER LDD++ + + +GNDFLP+LP L + +
Sbjct: 244 KFYLLHLSLLREYLSLEFRDLDTELNFEYNFERVLDDFILIMYVIGNDFLPNLPDLHLNK 303
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENG 381
GA ++ +K+ + + L ENG
Sbjct: 304 GAFPLILETFKQALRQCDGYLN--ENG 328
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+IDFYP + ID+NGKK +W+ V LL FVDE+RL AL P+ +KL++EE
Sbjct: 625 SPLIDFYPAEVDIDMNGKKASWEAVVLLSFVDEKRLLDALKPFEQKLTIEE 675
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ K +D + + YV GL WVL YYY+GC SW W++ +HYAP SD
Sbjct: 513 WKDQYYKEKVHFSINDKENLVDMTQNYVEGLQWVLYYYYKGCPSWNWFYRYHYAPRISDI 572
Query: 475 -INIAE-VDTN----FETGT 488
+ + E V TN FE T
Sbjct: 573 HVGVEEYVKTNHKIKFEKST 592
>gi|349578059|dbj|GAA23225.1| K7_Kem1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1528
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLAKGLDQDIEFD 581
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPPA-FRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLCKLSPEE 667
>gi|345495292|ref|XP_001606765.2| PREDICTED: 5'-3' exoribonuclease 1-like [Nasonia vitripennis]
Length = 1200
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 269/543 (49%), Gaps = 125/543 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ +E +IP ++DNLYLDMN IIH
Sbjct: 1 MGVPKFFRFISERYP-----CINKIIKE---HEIP-----------QYDNLYLDMNSIIH 41
Query: 61 PCTHPED--------KPAPKDEDEMMVAIFECIDR----LFRIVRPRKLLYMAIDGVAPR 108
C+HP D K DED IFE + R +FRIV+P ++L++A DGVAPR
Sbjct: 42 TCSHPTDSDVHFRIGKKEFSDED-----IFENVSRYVEIIFRIVKPLEMLFLAFDGVAPR 96
Query: 109 AKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 168
AKMNQQR+ RFR +++ + I E RE LL D FD+N ITPGT FM
Sbjct: 97 AKMNQQRANRFRVARDNS--ILE----REILLTDKL-----------FDANSITPGTVFM 139
Query: 169 ARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
A L + ++I +++ DP W+ K+ILS + PGEGEHKIM +IR +AQ +++ NT+H
Sbjct: 140 ADLIDHMKHFIAYKVSTDPLWQKCKIILSGSEAPGEGEHKIMQFIRYHKAQQNYNSNTRH 199
Query: 229 CLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
CL DADLI+LGL THEP+F+++RE+ G K PE
Sbjct: 200 CLYSLDADLIVLGLCTHEPHFSLLREK------------NTFGKAKKMLT-------PE- 239
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
E +F + LS+ REYL E A L F + E+ +DDWV + F VGNDF+P
Sbjct: 240 ------ESDFHLLHLSLFREYLGYEFAPIKSKLKFEFDLEKIIDDWVLIGFLVGNDFIPQ 293
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK--RSFDDVD-------- 396
LP L I GA+ L ++Y + V T + E R K +S V+
Sbjct: 294 LPHLNIVNGALPLLYSVYIE-VLPTLDGYINEAGELNLSRFEKYIKSLSHVEHKIFASTV 352
Query: 397 --------------------ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDI----- 431
E E D+ + + K + Y S F+V + D
Sbjct: 353 SSKICNVKEAKKVDPITGHFEQLSIESKKDDAKDLDQEMKTKEY-SNFEVQRRDYYLHKL 411
Query: 432 -------AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
+ L + HEY+ + W L YYY GC SW WYFP+HYAPF D + ++ F
Sbjct: 412 NFEDLSESLILPLVHEYIRAIQWTLNYYYHGCCSWSWYFPYHYAPFIRDVKGLENINLKF 471
Query: 485 ETG 487
+
Sbjct: 472 DMA 474
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPII FYP +F+IDLN K W+ + L+PF++E+ L A+ Y L+ +E
Sbjct: 507 NSPIIHFYPNEFEIDLNDKSNDWEAIVLIPFINEKELISAMDSYITTLNPKE 558
>gi|397628044|gb|EJK68715.1| hypothetical protein THAOC_10078 [Thalassiosira oceanica]
Length = 1579
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/367 (45%), Positives = 221/367 (60%), Gaps = 50/367 (13%)
Query: 6 FFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHP 65
F+RWLS +YP + Q I ++ P EFD+LYLDMNGIIH CTHP
Sbjct: 63 FYRWLSERYPKI-------------NQVITNEALLP-----EFDHLYLDMNGIIHGCTHP 104
Query: 66 E--DKPAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAS 122
D E +M++ I +DR+ +IV+P+ ++MAIDGVAPRAK+NQQRSRRFR++
Sbjct: 105 NHLDVSDVLTERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSA 164
Query: 123 KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDR 182
K+ AE E R+R AD P+ G+ FDSNCITPGT F+ R+S C+ Y+I +
Sbjct: 165 KDLAEATKEAQRLRPIDGAD-----PDPYAGA-FDSNCITPGTEFLLRISNCIRYFIRKK 218
Query: 183 LNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGL 242
+ DP W+ + VI S VPGEGEHKIM +IR R Q + PNT+HC+ G DADLIMLGL
Sbjct: 219 IKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNTRHCMYGQDADLIMLGL 278
Query: 243 ATHEPNFTIIREEFKPNQARPCDVCGQMG---HEMKECVGLDAEPNPESVITFGSEVEFI 299
+HEP+FT++RE D G G + +KE V F + +F
Sbjct: 279 VSHEPHFTLLREII--------DFSGGFGRNDNALKE------------VKKFTKQSDFQ 318
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
+ LS+LREYLE E A + Y ER +DD+VFM F VGNDFLPH+P+L+I +GA
Sbjct: 319 LLHLSILREYLEIEFAYQHDQSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTL 378
Query: 360 LVNLYKK 366
L + Y++
Sbjct: 379 LFDTYRE 385
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCW 447
V+ DV ++ E +V E K RYY K + DIA L + Y+ GL W
Sbjct: 470 VRSMMADVSSGTQVVEGWKQVGESEKDHKGRYYYEKLQLKPVDIAGHLALRKSYIEGLIW 529
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEV--DTNFETGTQPV 491
L YYY+GC SW W+FP+HY P SD N+ V FE G QP+
Sbjct: 530 CLAYYYRGCISWGWFFPYHYGPMISDLTNLPAVFQSIRFEIG-QPL 574
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
+SPI +YP F +D+NGK+ W+GV +LPF+D RL A+
Sbjct: 604 ESPIKQYYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAI 644
>gi|256272237|gb|EEU07228.1| Kem1p [Saccharomyces cerevisiae JAY291]
Length = 1528
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLVKGLDQDIEFD 581
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPP-TFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLCKLSPEE 667
>gi|6321265|ref|NP_011342.1| Xrn1p [Saccharomyces cerevisiae S288c]
gi|125342|sp|P22147.1|XRN1_YEAST RecName: Full=5'-3' exoribonuclease 1; AltName: Full=DNA strand
transfer protein beta; Short=STP-beta; AltName:
Full=KAR(-)-enhancing mutation protein; AltName:
Full=Strand exchange protein 1; AltName: Full=p175
gi|3847|emb|CAA38520.1| KEM1 protein [Saccharomyces cerevisiae]
gi|4413|emb|CAA43487.1| RAR5 [Saccharomyces cerevisiae]
gi|172580|gb|AAA35036.1| strand exchange protein 1 [Saccharomyces cerevisiae]
gi|172775|gb|AAA35125.1| DNA strand transferase beta [Saccharomyces cerevisiae]
gi|173192|gb|AAA35219.1| 5'-3' exoribonuclease [Saccharomyces cerevisiae]
gi|695728|emb|CAA59180.1| DNA strand transferase, exoribonuclease [Saccharomyces cerevisiae]
gi|1322778|emb|CAA96885.1| KEM1 [Saccharomyces cerevisiae]
gi|285812040|tpg|DAA07940.1| TPA: Xrn1p [Saccharomyces cerevisiae S288c]
gi|392299577|gb|EIW10671.1| Kem1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1528
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLAKGLDQDIEFD 581
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPPA-FRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLRKLSPEE 667
>gi|403171712|ref|XP_003330904.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169305|gb|EFP86485.2| hypothetical protein PGTG_12441 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 751
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 219/372 (58%), Gaps = 59/372 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRW+++KYP V++H Q + G IP E DNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWMTQKYP-VVLH------QVIQGDCIP-----------EIDNLYLDMNGIIH 42
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP A E E+ IF ++ LF + +P+KL +MA+DGVAPRAKMN+QRSRR
Sbjct: 43 NCSHPSTPTADFQITEPEIFSGIFAALEHLFTLAKPKKLFFMAVDGVAPRAKMNEQRSRR 102
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F+A++ + A R + +++ FDSNCITPGTPFMARL L Y+
Sbjct: 103 FKAAQANQTMLQRNAFRRFQTVSNS------------FDSNCITPGTPFMARLHEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ ++ DP W+ ++VI S +VPGEGEHKIM+YIR+ + Q D+ P+ +HC+ G DADLI
Sbjct: 151 INKKVTEDPAWQAVQVIFSGHDVPGEGEHKIMEYIRRAKTQQDYSPHIRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
ML L +HEP+F ++REE + R K + L + +F
Sbjct: 211 MLALLSHEPHFCLLREENRAPLKR------------KPTINLKDQ-------------QF 245
Query: 299 IFVRLSVLREYLEKELAMPNL--PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
++S+ R+YL E + L F Y R +DD++ +C FVGNDFLPHLP+L I +GA
Sbjct: 246 HLFQISLFRDYLNWEFSSLQLIKNFKYDIRRIIDDFILLCIFVGNDFLPHLPNLHIDDGA 305
Query: 357 VDRLVNLYKKTV 368
+ L +YKK +
Sbjct: 306 IGVLFKIYKKIL 317
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 376 RQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
R N G GR + DD D+ + +K +YY++K ++ +D
Sbjct: 493 RTPGNWGMYGRKPPKQSDD-----------DDFHAYLKQWKSKYYKNKMELQYNDSVQLH 541
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
+ H YV GL W+L+YYY G SW W +P+HYAP SD +A +FE G+
Sbjct: 542 KLTHAYVEGLQWILQYYYTGVASWSWAYPYHYAPMVSDLNKVASYKFSFELGS 594
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 649 STKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPY 708
ST PS P DSPI+D YP F+ DLNGK+ WQ +A +PF+D RL +A+ +
Sbjct: 611 STHVPSAFQDLMTKP-DSPILDLYPTSFETDLNGKRHEWQAIAKIPFIDSRRLLEAMKAH 669
Query: 709 YEKLSVEESE 718
KL EE E
Sbjct: 670 EYKLKDEEIE 679
>gi|239612327|gb|EEQ89314.1| exonuclease Kem1 [Ajellomyces dermatitidis ER-3]
Length = 1440
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 233/375 (62%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAIKQGVEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E+ E E A L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELEFQELEEA-DALQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKIYKQVLPK 322
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K+ YY+SKF D+ + YV GL WVL Y
Sbjct: 494 VKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYY 553
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 554 YYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLG-QP 591
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A
Sbjct: 622 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLGAMA 663
>gi|332029616|gb|EGI69505.1| 5'-3' exoribonuclease 1 [Acromyrmex echinatior]
Length = 1679
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/367 (45%), Positives = 220/367 (59%), Gaps = 59/367 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEVVKE---HQIP-----------EFDYLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+HP D + +EM+ IF I+ LF ++RP+KL +MAIDGVAPRAK+NQQR RRF
Sbjct: 42 TCSHPNDDVCFRISEEMIFKNIFHYIEVLFNMIRPQKLFFMAIDGVAPRAKINQQRGRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+K+ AEV K +A G +P EK FDSNCITPGT FMA+L L ++
Sbjct: 102 RAAKD-----AEVQEA--KAIAKGIPIPKEK----RFDSNCITPGTLFMAKLGEQLKCFV 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+++ D WK K++ S + VPGEGEHKIMDYIR +A +++ ++ HCL G DADLIM
Sbjct: 151 EHKVSTDDAWKKCKILFSGSEVPGEGEHKIMDYIRYMKASKEYNSDSSHCLYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGL +HEPNF+++REE K G K+ V + E E +F
Sbjct: 211 LGLCSHEPNFSLLREEVK------------FG---KQQVKMTPE-----------ETKFC 244
Query: 300 FVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ LS+LREY+E E + L F + E+ +DDWV M F VGNDF+PHLP+L I GA+
Sbjct: 245 LLHLSLLREYIEHEFSPIKDKLSFSFDIEKIIDDWVLMGFLVGNDFIPHLPNLHIANGAL 304
Query: 358 DRLVNLY 364
L Y
Sbjct: 305 PILYRAY 311
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII++YP +FK DLNGK+ W+ V L+PF+DE+ L A+ P+ +L++EE
Sbjct: 544 ETSPIINYYPHNFKTDLNGKRQEWEAVVLIPFIDEKLLLAAMQPHLSRLTLEE 596
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
VD+ S+ E N E K YY +K + D YV + W L YYY
Sbjct: 424 VDDESDSEIYNMEFV----QHKKDYYMNKLEYENVDEEVLRSQAEGYVRAIQWNLHYYYH 479
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GC SW WY+P HYAP+ SD + ++ F+ G QP
Sbjct: 480 GCCSWSWYYPHHYAPYISDIKDFKDLKLEFDLG-QP 514
>gi|403367227|gb|EJY83428.1| 5'-3' exonuclease [Oxytricha trifallax]
Length = 1484
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/380 (42%), Positives = 223/380 (58%), Gaps = 67/380 (17%)
Query: 1 MGVPAFFRWLSRKYPSVI--VHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MG+P FFRWL+R+YP ++ V ED P DNLYLD+NGI
Sbjct: 1 MGIPKFFRWLTRRYPLILQNVQKEEDCP--------------------PIDNLYLDLNGI 40
Query: 59 IHPCTHPEDKPAP-------KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
+H C H D P+ +D DE+ V+I ID + V+P+KLL++A+DGVAPRAKM
Sbjct: 41 VHNCIHGND-PSKHEKVSKMEDFDEVWVSIMRAIDEIVHSVKPKKLLFLAVDGVAPRAKM 99
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
NQQR+RRFR++KE E RE+L +G KE FD+N I+PGT FM L
Sbjct: 100 NQQRARRFRSAKEAFES-------REQLRQEG------KEAPELFDTNAISPGTQFMFEL 146
Query: 172 SACLHYYIHDRLNNDPGWKGI-KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
LH+++ + N DP ++ + +VI+SD ++PGEGEHK+MD+IR+ + P +DPNT+HC
Sbjct: 147 CKQLHFFVQYKTNVDPLYQNLAQVIVSDGSIPGEGEHKMMDFIRQAKQSPQYDPNTRHCF 206
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
GADADLIML L THEP+F IIREE +++ V I
Sbjct: 207 YGADADLIMLSLLTHEPHFIIIREEHIFKKSKQGGV---------------------QRI 245
Query: 291 TFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+V F V +++LREY E E + + ER +DD+VF CFF+GNDFLP L
Sbjct: 246 DKKKQVNFQIVYINLLREYFELEYKPLQSQMKIQFDLERIIDDFVFFCFFIGNDFLPSLS 305
Query: 349 SLEIREGAVDRLVNLYKKTV 368
+L+I EG++D+L+ LY+K +
Sbjct: 306 ALDISEGSLDQLIKLYRKLL 325
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 671 FYPEDFKIDLNGKKFAWQGVALLPFVDE 698
++P+DF IDLNG+ W+ V L+PFV+E
Sbjct: 656 YFPDDFTIDLNGRSLPWEAVCLIPFVEE 683
>gi|190407116|gb|EDV10383.1| 5'-3' exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|259146337|emb|CAY79594.1| Kem1p [Saccharomyces cerevisiae EC1118]
Length = 1528
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLVKGLDQDIEFD 581
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPPA-FRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLCKLSPEE 667
>gi|261202580|ref|XP_002628504.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
gi|239590601|gb|EEQ73182.1| exonuclease Kem1 [Ajellomyces dermatitidis SLH14081]
Length = 1440
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 233/375 (62%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E+ E E A L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELEFQELEEA-DALQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKIYKQVLPK 322
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K+ YY+SKF D+ + YV GL WVL Y
Sbjct: 494 VKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYY 553
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 554 YYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLG-QP 591
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A
Sbjct: 622 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLGAMA 663
>gi|365765775|gb|EHN07281.1| Kem1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1528
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 225/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G E L+ + F
Sbjct: 211 MLGLSTHGPHFALLREEV------------TFGRRNSEKKSLEHQ-------------NF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLVKGLDQDIEFD 581
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPPA-FRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLCKLSPEE 667
>gi|151943641|gb|EDN61951.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
Length = 1528
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 224/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P+K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPKKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y+FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMQFEYNFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 493 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 552
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + + D F+
Sbjct: 553 PSWSWYYPHHYAPRISDLVKGLDQDIEFD 581
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPP-TFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLCKLSPEE 667
>gi|327353279|gb|EGE82136.1| exonuclease [Ajellomyces dermatitidis ATCC 18188]
Length = 1440
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 167/375 (44%), Positives = 233/375 (62%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AEVAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYHPDVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E+ E E A L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELEFQELEEA-DALQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKIYKQVLPK 322
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K+ YY+SKF D+ + YV GL WVL Y
Sbjct: 494 VKETTAEEAQQAAEKKYELKFQEWKNDYYKSKFGWGLDNHEEMRKLTENYVQGLQWVLYY 553
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 554 YYRGVASWPWFYQYHYSPMISDVKFGLKADMNFDLG-QP 591
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A
Sbjct: 622 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLGAMA 663
>gi|299749174|ref|XP_001838563.2| exonuclease II [Coprinopsis cinerea okayama7#130]
gi|298408317|gb|EAU83256.2| exonuclease II [Coprinopsis cinerea okayama7#130]
Length = 1468
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 154/320 (48%), Positives = 204/320 (63%), Gaps = 39/320 (12%)
Query: 53 LDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 110
D NGIIH C+HP D+ A E+++ +IF +D LF ++P+KL +MA+DGVAPRAK
Sbjct: 61 FDFNGIIHNCSHPNDEDAHFRLSEEQIFTSIFAYVDHLFEKIKPKKLFFMAVDGVAPRAK 120
Query: 111 MNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAR 170
MNQQRSRRFR +KE E +REK G LP EK FDSNCITPGTPFMAR
Sbjct: 121 MNQQRSRRFRTAKEAKE-------VREKAERRGEKLPEEKA----FDSNCITPGTPFMAR 169
Query: 171 LSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
LSA L Y+I+ ++ D W+ ++V+LS VPGEGEHKIM+YIR RAQPD++PN +HCL
Sbjct: 170 LSAQLRYFINKKITEDSNWRSVEVVLSGHEVPGEGEHKIMEYIRLSRAQPDYNPNVRHCL 229
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
G DADLIMLGL +H+P+F ++REE K R + G++ E
Sbjct: 230 YGLDADLIMLGLLSHDPHFCLLREEVKFGPQR------KKGNQSLESTN----------- 272
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPN--LPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
F + LS++REYL+ E LPFPY+ ER +DD++ + FVGNDFLP+LP
Sbjct: 273 -------FYLLHLSLMREYLDLEFRDIEHVLPFPYNLERVIDDFILLAVFVGNDFLPNLP 325
Query: 349 SLEIREGAVDRLVNLYKKTV 368
L I E +++L ++YKK +
Sbjct: 326 DLHIHENGLEKLFDVYKKAL 345
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
D +K YY K ++ DD + + YV GL WV+ YYY G SW W++ +HYAP S
Sbjct: 548 DEWKRSYYREKLEISYDDPKEMGDLVYRYVEGLQWVMHYYYSGVASWGWFYNYHYAPRIS 607
Query: 473 DFINIAEVDTNFETG 487
D N+ ++ NFE G
Sbjct: 608 DLRNVDQMTFNFELG 622
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+SPI+DFYP +F+ DLNGKK W+ V +PF+DEERL KA+A +L+ EE +
Sbjct: 655 NSPILDFYPLEFESDLNGKKQDWEAVVKIPFIDEERLLKAMASREHRLTPEERQ 708
>gi|449278569|gb|EMC86380.1| 5'-3' exoribonuclease 1, partial [Columba livia]
Length = 1710
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 198/322 (61%), Gaps = 39/322 (12%)
Query: 47 EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
EFDNLYLDMNGIIH C+HP D ED++ IF ++ LFRI++PRK+ +MA+DG
Sbjct: 3 EFDNLYLDMNGIIHQCSHPNDDDVHFRISEDKIFADIFHYLEVLFRIIKPRKVFFMAVDG 62
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAPRAKMNQQR RRFR++KE +KI +K L G LP E + FDSNCITPG
Sbjct: 63 VAPRAKMNQQRGRRFRSAKEAEDKI-------KKALEKGETLPTE----ARFDSNCITPG 111
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FMARL L Y+++ +++ D W+G+ V LS PGEGEHKIM++IR ++A+P HDP
Sbjct: 112 TEFMARLHEHLKYFVNMKISTDKSWQGVTVYLSGHETPGEGEHKIMEFIRSEKAKPHHDP 171
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
NT+HCL G DADLIMLGL +HE +F ++REE + + C
Sbjct: 172 NTRHCLYGLDADLIMLGLTSHEAHFALLREEVRFGGKKSQRACA---------------- 215
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGND 342
PE E F + LS++REY++ E + + F Y ER +DDW+ M F VGND
Sbjct: 216 -PE-------ETTFHLLHLSLMREYIDYEFSPVKDKISFEYDIERIIDDWILMGFLVGND 267
Query: 343 FLPHLPSLEIREGAVDRLVNLY 364
F+PHLP L I A+ L Y
Sbjct: 268 FIPHLPHLHINHDALPLLYRTY 289
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K YY +K V F YV + W+L YYY G +SW WY+P+HYAP+ SD
Sbjct: 406 YKRTYYMTKMGVEVVSDDFLADQAECYVQAIQWILHYYYHGVQSWSWYYPYHYAPYLSDI 465
Query: 475 INIAEVDTNFETG 487
NI E+ FE G
Sbjct: 466 RNIGELKIKFELG 478
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
QDSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ + L EE
Sbjct: 510 QDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLQAMESCNKCLKEEE 562
>gi|406861681|gb|EKD14734.1| exonuclease II Exo2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1395
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 164/377 (43%), Positives = 226/377 (59%), Gaps = 60/377 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E++M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTDDAMFRMTEEQMFIAIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE AR +K + +G +P E+ FDSN ITPGT FM +L+ L Y+
Sbjct: 102 FRTALD-----AENAR--DKAIKEGKEMPKEEA----FDSNAITPGTAFMHKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR +AQPD+D N +HCL G DADLI
Sbjct: 151 INKKVSEDTDWQGVEVVLSGHEVPGEGEHKIMEYIRLAKAQPDYDANIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + ++ H+ F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSKAK-SKELEHQ-----------------------NF 246
Query: 299 IFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L ++REYLE +EL P L + ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 247 YLMHLCIVREYLELEFQELKEPGVLSASFDLERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYKT 371
GA+ + +YK + K
Sbjct: 307 GALALMFKVYKTVLPKA 323
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 394 DVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
DV ++ + E + + + +KD YY+ KF+ +++ + YV GL WVL YYY
Sbjct: 485 DVSKADAQAEMDRQYEVKFQEWKDTYYKGKFEWDRNNETELTKLCENYVQGLQWVLHYYY 544
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
+G SW WY+ +HY+P SD I D NF+ G QP
Sbjct: 545 RGVVSWPWYYQYHYSPMISDVIKGLNADVNFKLG-QP 580
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+AP Y LS +E
Sbjct: 611 NSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLAAMAPKYLLLSEDE 662
>gi|405120875|gb|AFR95645.1| exonuclease II Exo2 [Cryptococcus neoformans var. grubii H99]
Length = 1448
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/319 (49%), Positives = 204/319 (63%), Gaps = 42/319 (13%)
Query: 53 LDMNGIIHPCTHP---EDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 108
LDMNGIIH C+HP E+ P + E++M++AIF ID LF ++P+K+ +MAIDGVAPR
Sbjct: 23 LDMNGIIHNCSHPPSSENDPHFRITEEQMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPR 82
Query: 109 AKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 168
AKMNQQRSRRFRA K+ ++ REK +G LP EK FDSN ITPGTPFM
Sbjct: 83 AKMNQQRSRRFRAGKDARDQ-------REKAEKNGEKLPDEKA----FDSNAITPGTPFM 131
Query: 169 ARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
ARLS L YY+ R++ D W+ I+VILS +VPGEGEHKI ++IR +AQPD++PNT+H
Sbjct: 132 ARLSQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGEHKIQEFIRLNKAQPDYNPNTRH 191
Query: 229 CLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
CL G DADLIMLGL +H+P+F ++REE G + N E
Sbjct: 192 CLYGLDADLIMLGLLSHDPHFCLLREEV--------------------TFGRKSRQNTEL 231
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
T F + LS++REYL+ E + + F Y ER +DD++ M FVGNDFLPH
Sbjct: 232 ANT-----NFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPH 286
Query: 347 LPSLEIREGAVDRLVNLYK 365
LP L I EGA++R+ +YK
Sbjct: 287 LPDLHINEGALERIWGMYK 305
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 384 GGRGVKRSFDD------VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRL 435
G V+R F + VD E+ E + + +L E D K +YY K ++ D A
Sbjct: 472 GKLAVQRVFRNWSKAAVVDTYPEDVEKSMDEKLKEAMDDIKRQYYHDKLEINYSDPAQMQ 531
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ H Y+ GL W+L YYY+G SW W++ +HY+P +D ++++ F+ G
Sbjct: 532 DLVHHYIEGLQWILNYYYKGVSSWGWFYKYHYSPRITDLKGVSDMKFEFDYG 583
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPIIDFYP +F++D+NGKK W+ V +PF+D+ RL KA+A +L+ EE E
Sbjct: 615 ETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDIRLTPEERE 669
>gi|189237444|ref|XP_974750.2| PREDICTED: similar to 5-3 exoribonuclease 1 [Tribolium castaneum]
Length = 1485
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 220/372 (59%), Gaps = 63/372 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E +IP FDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEFVKEY---QIPV-----------FDNLYLDMNGIIH 41
Query: 61 PCTHPEDK-PAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D P + +E + A IF I+ LFR+++P+K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 MCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++K+ + E + EKL P+ E+ FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKDAEKMELEAKKKGEKL--------PDVER---FDSNCITPGTEFMARLHEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ D WK K+ILS PGEGEHKIMDYIR R+QP +DPNT+HCL G DADLI
Sbjct: 151 VVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL TH+P+F+++REE K G + K E+ F
Sbjct: 211 MLGLCTHDPHFSLLREEVK------------FGKKAKRS-------------NVPEEIRF 245
Query: 299 IFVRLSVLREYLE------KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ LS++REYLE KE + + E +DDW+ M F VGNDF+P+LP+L I
Sbjct: 246 YLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNLPNLHI 305
Query: 353 REGAVDRLVNLY 364
GA+ L Y
Sbjct: 306 SNGALPVLYKAY 317
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 414 GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+KD YY +K + + YV + W L YYY G SW W++P HY+P+ SD
Sbjct: 428 SYKDEYYRNKLEFQEVTREVMREQAEGYVRAIQWNLNYYYNGVCSWSWFYPHHYSPYISD 487
Query: 474 FINIAEVDTNFETG 487
+++ +FE G
Sbjct: 488 IKGFSDLKIDFELG 501
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S I +YPE+F+ DLNGK+ W+ V L+PF+DE+ L A+ P E L+ EE++
Sbjct: 534 NSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAK 587
>gi|363756508|ref|XP_003648470.1| hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891670|gb|AET41653.1| Hypothetical protein Ecym_8383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1479
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 226/375 (60%), Gaps = 66/375 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P++ Q ++G +I EFD LYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPNI--------SQLLDGSQIS-----------EFDTLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ + IF ID LFR ++P+++ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDADVTKRLSEEEVYLKIFTYIDHLFRTIKPKEVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + + +K + +G +P G FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAEKAL-------KKAIENGEEIP----SGEPFDSNCITPGTEFMAKLTKNLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH+++++D W+ VILS VPGEGEHKIM++IR R+Q D++PNT+HC+ G DADLI
Sbjct: 151 IHEKISSDSLWRQANVILSGHEVPGEGEHKIMEHIRILRSQKDYNPNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
+LGL+ H+ +F ++REE K + ++P + +
Sbjct: 211 ILGLSVHDSHFALLREEVLFGKNHNSKPLE-----------------------------Q 241
Query: 296 VEFIFVRLSVLREYLEKELA-MPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F + +S+LREYLE E A + N L F Y FER LDD++ + F +GNDFLP+LP L +
Sbjct: 242 QNFFLLHISILREYLELEFAELENELMFEYDFERLLDDFILVLFVIGNDFLPNLPDLHLN 301
Query: 354 EGAVDRLVNLYKKTV 368
+GA L+ +K+ +
Sbjct: 302 KGAFPVLLQTFKEAL 316
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 410 LWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+++D F KD YY+ K D YV GL WVL YYYQGC SW WY+ +H
Sbjct: 502 IYDDRFNQWKDAYYKEKLGFSYYDDEKLKEQTENYVEGLQWVLYYYYQGCPSWSWYYKYH 561
Query: 467 YAPFASDFINIAEVDTNFE 485
YAP SD I +FE
Sbjct: 562 YAPRISDIIKGINKKISFE 580
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+ SPI+DFYP D ++D NGK W+ V + FVD ERL K +APY EKL+ EE +
Sbjct: 614 EKSPILDFYPNDVELDKNGKTADWEAVVKISFVDAERLIKVMAPYDEKLNQEEKD 668
>gi|270007014|gb|EFA03462.1| hypothetical protein TcasGA2_TC013457 [Tribolium castaneum]
Length = 1531
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/372 (44%), Positives = 220/372 (59%), Gaps = 63/372 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E +IP FDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSEFVKEY---QIPV-----------FDNLYLDMNGIIH 41
Query: 61 PCTHPEDK-PAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D P + +E + A IF I+ LFR+++P+K+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 MCSHPDDNNPHFRITEEKIFADIFHYIEFLFRMIKPQKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++K+ + E + EKL P+ E+ FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKDAEKMELEAKKKGEKL--------PDVER---FDSNCITPGTEFMARLHEQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ D WK K+ILS PGEGEHKIMDYIR R+QP +DPNT+HCL G DADLI
Sbjct: 151 VVSKVSTDNMWKKCKIILSGHETPGEGEHKIMDYIRYIRSQPGYDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL TH+P+F+++REE K G + K E+ F
Sbjct: 211 MLGLCTHDPHFSLLREEVK------------FGKKAKRS-------------NVPEEIRF 245
Query: 299 IFVRLSVLREYLE------KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+ LS++REYLE KE + + E +DDW+ M F VGNDF+P+LP+L I
Sbjct: 246 YLLHLSLMREYLEMEFSPLKEALKDSDKIKFDIENIIDDWILMGFLVGNDFIPNLPNLHI 305
Query: 353 REGAVDRLVNLY 364
GA+ L Y
Sbjct: 306 SNGALPVLYKAY 317
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 414 GFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+KD YY +K + + YV + W L YYY G SW W++P HY+P+ SD
Sbjct: 428 SYKDEYYRNKLEFQEVTREVMREQAEGYVRAIQWNLNYYYNGVCSWSWFYPHHYSPYISD 487
Query: 474 FINIAEVDTNFETG 487
+++ +FE G
Sbjct: 488 IKGFSDLKIDFELG 501
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S I +YPE+F+ DLNGK+ W+ V L+PF+DE+ L A+ P E L+ EE++
Sbjct: 534 NSLIKSYYPEEFQTDLNGKRQEWEAVVLVPFIDEKNLLNAMKPCNELLTPEEAK 587
>gi|240277600|gb|EER41108.1| exonuclease II Exo2 [Ajellomyces capsulatus H143]
Length = 1138
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 231/375 (61%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E ++ L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELE-FQELEEENALQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKVYKQVLPK 322
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F KD YY+SKF D+ + YV GL WVL Y
Sbjct: 493 VKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWAMDNHEEMRQLTENYVQGLQWVLYY 552
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD E D NF+ G QP
Sbjct: 553 YYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLG-QP 590
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A L+ EE+
Sbjct: 621 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEEN 673
>gi|401842124|gb|EJT44395.1| XRN1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1526
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 223/376 (59%), Gaps = 61/376 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QLIEGTQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ I ID LF+ ++P K+ YMAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHGNDDDVTKRLTEEEVFAKICTYIDHLFQTIKPNKIFYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEK + K + +G +P KG FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMD-AEKAMK------KAIENGDEIP----KGEPFDSNSITPGTEFMAKLTKNLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IHD+++ND W+ +++I S VPGEGEHKIM++IR ++Q D + NT+HC+ G DADLI
Sbjct: 151 IHDKISNDSKWREVQIIFSGHEVPGEGEHKIMNFIRHLKSQKDFNQNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+TH P+F ++REE G+ E K F
Sbjct: 211 MLGLSTHGPHFALLREEV---------TFGRRNSEKKSL----------------EHQNF 245
Query: 299 IFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ LS+LREY+E KE+A + F Y FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 246 YLLHLSLLREYMELEFKEIA-DEMRFEYDFERILDDFILVMFVIGNDFLPNLPDLHLNKG 304
Query: 356 AVDRLVNLYKKTVYKT 371
A L+ +K+ + T
Sbjct: 305 AFPVLLQTFKEALLHT 320
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 379 ENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRL 435
+N R + + + ++EE E ++ + F K YY K D
Sbjct: 472 QNRVNSTRKTIKKYQNAIIVEDKEELETEKTIYNERFEHWKHEYYRDKLKYASDCEERVT 531
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
+ +YV GL WVL YYY+GC SW WY+P HYAP SD + + D F+
Sbjct: 532 DLSKDYVEGLQWVLYYYYRGCPSWSWYYPHHYAPRISDLVKGLDQDIEFD 581
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 590 QQLMAVLPERSKNLIPPA-FRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 648
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 649 EKRLIEAMQPYLSKLSPEE 667
>gi|295657260|ref|XP_002789200.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284447|gb|EEH40013.1| 5'-3' exoribonuclease [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1445
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/375 (43%), Positives = 231/375 (61%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AEVA+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTAYD-----AEVAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E ++ L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELE-FQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKIYKQVLPK 322
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +++ V E++ EE + +E F K+ YY+SKF D+ + YV
Sbjct: 487 VMRRYENAKVKETTAEEAQQAAEKKYELKFQEWKNNYYKSKFRWGMDNHEEMRKLTENYV 546
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GL WVL YYY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 547 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLG-QP 593
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF++E+RL KA+A L+ EE
Sbjct: 624 ESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEE 675
>gi|156845531|ref|XP_001645656.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116322|gb|EDO17798.1| hypothetical protein Kpol_541p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 1521
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 223/374 (59%), Gaps = 57/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P+++ Q + +IP EFDNLYLDMN I H
Sbjct: 1 MGIPKFFRYISERWPTIL--------QLIENDQIP-----------EFDNLYLDMNSIFH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D + K E+E+ IF ID LF ++P+K YMAIDGVAPRAKMNQQRSR
Sbjct: 42 NCTHGNDIDSTKRRLSEEEVFQNIFNYIDHLFNTIKPKKKFYMAIDGVAPRAKMNQQRSR 101
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR++ + + +K + +G LP KG FD+N ITPGT FMA+L+ + Y
Sbjct: 102 RFRSAMDAENAM-------KKAIENGDELP----KGEPFDTNSITPGTEFMAKLTKNIKY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+IH+++++D W+ I++I S VPGEGEHKIMD+IR R+ +DPNT+HC+ G DADL
Sbjct: 151 FIHNKISSDSNWRNIEIIFSGHEVPGEGEHKIMDFIRSIRSLDTYDPNTRHCIYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL+TH+P+F ++REE + R + LD +
Sbjct: 211 IMLGLSTHDPHFALLREEVRFGNQRNSSNNSTLS-------ALDKQ-------------N 250
Query: 298 FIFVRLSVLREYLE---KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS+LR+YL KE+A + F Y FE+ LDD++ + F +GNDFLP+LP L + +
Sbjct: 251 FYLLHLSLLRQYLNLEFKEVA-DGINFKYDFEKVLDDFILIMFVIGNDFLPNLPDLHLNK 309
Query: 355 GAVDRLVNLYKKTV 368
GA ++ +K+ +
Sbjct: 310 GAFPVILQTFKEAL 323
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD-VPKDDIAFRLMVGHEYVLGLC 446
V + F D E++E+EE + E F DR KF+ + DD + YV GL
Sbjct: 534 VLKPFSDSSETNEQEEHS-----IESEFIDR---PKFEYIITDDENKLTELCKNYVEGLQ 585
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
WVL YYY+GC SW WY+ +HYAP SD + T+F+
Sbjct: 586 WVLYYYYRGCPSWNWYYKYHYAPRISDLTRGLDQTTSFD 624
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+D YP + ++D NGK W+ V LLPFVDE RL A+ P+ KLS EE E
Sbjct: 660 SPILDLYPNEVELDKNGKTADWEAVVLLPFVDENRLIDAMKPHLAKLSPEEKE 712
>gi|353234672|emb|CCA66695.1| probable KEM1-5`-3` exonuclease component of cytoplasmic processing
(P) bodies [Piriformospora indica DSM 11827]
Length = 1438
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 207/343 (60%), Gaps = 54/343 (15%)
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 105
DNLY+D NGIIH C+HP D E+++ +IF ++ LF ++PRK+ +MAIDGV
Sbjct: 9 LDNLYVDFNGIIHNCSHPNDGDVHFRLSEEQIFTSIFAYVEHLFTKIKPRKVFFMAIDGV 68
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGT 165
APRAKMNQQRSRRFR +KET + + EK L G LP EK FDSNCITPGT
Sbjct: 69 APRAKMNQQRSRRFRTAKETKDLV-------EKALRKGEKLPDEKA----FDSNCITPGT 117
Query: 166 PFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN 225
PFMARLS L Y+++ ++ D W+ ++VILS VPGEGEHKIM+YIR +AQ D++PN
Sbjct: 118 PFMARLSLQLQYFVNKKITEDSNWRDVQVILSGHEVPGEGEHKIMEYIRLSKAQKDYNPN 177
Query: 226 TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
T+HCL G DADLIMLGL +H+P+F ++REE K G + K+ G
Sbjct: 178 TRHCLYGLDADLIMLGLLSHDPHFALLREEVK------------FGPQAKKKSG------ 219
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKEL-----------------AMPNLPFPYSFERA 328
T ++ F + L + REYL E + P LPF YS ER
Sbjct: 220 -----TLETQ-SFFLLHLCLFREYLNLEFQPLWDPKAINIADPSASSKPILPFEYSLERI 273
Query: 329 LDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+DD++ + FVGNDFLPHLP L I + A++ L Y++T+ K
Sbjct: 274 IDDFILLAVFVGNDFLPHLPDLHIHDNALEVLFEKYRETLPKA 316
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
DE + +E ++ D +K +YY+ K ++ DD + + Y+ GL WV+ YYY G
Sbjct: 493 DEGTFDERYETTLKARMDNWKRQYYQEKLEIKYDDKEAMDKLVYRYIEGLQWVMHYYYSG 552
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
SW W++ +HYAP SD + ++ +F+ G
Sbjct: 553 VASWGWFYDYHYAPRISDLKGVDKMKFDFKLG 584
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+DFYP DF+ DLNGKK W+ + +PF++E+RL +A+A +L+ EE E
Sbjct: 618 SPILDFYPTDFESDLNGKKQEWEAIVKIPFINEQRLLQAMASREHRLTKEEKE 670
>gi|312371117|gb|EFR19377.1| hypothetical protein AND_22598 [Anopheles darlingi]
Length = 380
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 161/368 (43%), Positives = 211/368 (57%), Gaps = 59/368 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E ++P EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYISERYP-----CLSELLRE---NQVP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E M+ IF ++ LF+++RP+K+ ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDADVTYRISEEMIFEGIFHYVEYLFKMIRPQKVFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ E E++ +A G +P E FDSNCITPGT FM RL L ++
Sbjct: 102 FRSAHEAGEQLKAA-------IAKGETIPDE----DRFDSNCITPGTAFMVRLQKALEHF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I ++ D WK VILS PGEGEHKIM+YIR +AQP +PNT+HCL G DADLI
Sbjct: 151 IQVKIATDILWKACTVILSGHETPGEGEHKIMEYIRHAKAQPGFNPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THE F+++REE K G K+ T E+ F
Sbjct: 211 MLGLCTHERFFSLLREEVK------------FGKNDKKA-------------TVMKEIRF 245
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ L++L EYLE E A L FP+ + +DDW+ M + VGNDF+PHLP+L I E A
Sbjct: 246 YLLHLTLLSEYLELEFASVRNKLRFPFDIHKLIDDWILMIYLVGNDFIPHLPNLHINENA 305
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 306 LPTLYRAY 313
>gi|226294212|gb|EEH49632.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb18]
Length = 1445
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 230/376 (61%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D +P ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-RDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEVA+ EK + G +P E + FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTAYD-----AEVAK--EKAIKQGIEMPKE----AAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IMLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM---------------- 253
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
VR + E ++ L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 254 ------VREYLELE-FQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK+ + K
Sbjct: 307 GALAWMFKIYKQVLPK 322
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +++ V E++ EE + +E F K+ YY+SKF D+ + YV
Sbjct: 487 VMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWGMDNHEEMRKLTENYV 546
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GL WVL YYY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 547 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLG-QP 593
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF++E+RL KA+A L+ EE
Sbjct: 624 ESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEE 675
>gi|171694057|ref|XP_001911953.1| hypothetical protein [Podospora anserina S mat+]
gi|170946977|emb|CAP73781.1| unnamed protein product [Podospora anserina S mat+]
Length = 1419
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 161/386 (41%), Positives = 225/386 (58%), Gaps = 62/386 (16%)
Query: 3 VPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPC 62
VP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH C
Sbjct: 1 VPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIHNC 41
Query: 63 THPED---KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
TH + + A E++M +AIF I+ LF ++P+ L +MAIDGVAPRAKMNQQR+RRF
Sbjct: 42 THKDSDDVQQARISEEQMFIAIFNYIEHLFGKIKPKTLFFMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R + + R R+K + +G LP E FDSNCITPG + L Y+I
Sbjct: 102 RTA-------LDAERARDKAIQEGKELPKEPP----FDSNCITPGMLLPPDVWFSLKYFI 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+ +++ D W+G +++LS VPGEGEHKIM+YIR RAQPD++PN +HCL G DADLIM
Sbjct: 151 NKKVSEDKDWQGPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYNPNVRHCLYGLDADLIM 210
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
LGL +H+P+F ++REE + + + ++ H+ F
Sbjct: 211 LGLLSHDPHFCLLREEVQFGRVKDQHKVKELEHQ-----------------------NFY 247
Query: 300 FVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ L ++REYLE +EL +P +P P+ E+ +DD++ M FFVGNDFLP+LP I EG
Sbjct: 248 LMHLCIVREYLELEFQELKVPGAIPMPFDMEKVIDDFILMAFFVGNDFLPNLPRFHINEG 307
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENG 381
A+ + +YK+ + K + ENG
Sbjct: 308 ALATMFKIYKEVLRKCDGYI--NENG 331
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+AP + LS EE
Sbjct: 610 KDSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLDAMAPKNDLLSDEE 662
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 397 ESSEEEESNDEVRLWEDGF-KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
+S+ E + + + W+DG+ KD++ E +D++ + YV GL WVL YYY+G
Sbjct: 490 QSAMEAKYKQKFQEWKDGYYKDKFPEWAEGKHEDELR---KLAENYVQGLQWVLFYYYRG 546
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFIL 501
SW W++ +HY+P SD + D NF G QP N L +L
Sbjct: 547 IASWPWFYRYHYSPLVSDVVKGLGADLNFTLG-QPFRPNEQLMGVL 591
>gi|162606084|ref|XP_001713557.1| very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
gi|13794477|gb|AAK39852.1|AF165818_60 very similar to mouse Dhm1 and Dhm2 [Guillardia theta]
Length = 542
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/482 (39%), Positives = 253/482 (52%), Gaps = 65/482 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + QKI F+ S EFD YLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPLI-------------NQKI-FEKS-------EFDCFYLDMNGIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C ++D + IF+ + L+ I+ P+KLLY+AIDGVAPRAKMNQQRSRRFR
Sbjct: 40 TCFQKIASEQNFNKDILFQKIFDYTEYLYTIIHPKKLLYLAIDGVAPRAKMNQQRSRRFR 99
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A K+ +K R R L DSNCITPGT FMA LS ++
Sbjct: 100 AIKDNEKKSDFDHRNRLNLT---------------LDSNCITPGTSFMAELSYAFKIWLE 144
Query: 181 DRLNNDPGWK-GIKVILSDANVPGEGEHKIMDYIRKQRAQPDH-DPNTQHCLCGADADLI 238
++ D W+ G +I S A VPGEGEHKIM++IRK + ++ D HCL G DADLI
Sbjct: 145 KKIKTDIEWQTGCDIIFSGAEVPGEGEHKIMNFIRKLKNLKNNPDLILSHCLYGLDADLI 204
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE NFT++RE+ + + +KE + E +P +F
Sbjct: 205 MLGLVSHEKNFTLLREK----------LAWKGTSNVKEGYNYEFEKSPSD--------DF 246
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ +S+LRE L E L Y+ ER +DD+VFMC +GNDFLP +P L+I G +
Sbjct: 247 HLLEISLLREMLYLEFRPREFLDQDYNMERIVDDFVFMCMLIGNDFLPGIPHLDIGYGGL 306
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEE----EESND-EVRLWE 412
+ LV YK+ L + G + F+ + SEE + ND E L
Sbjct: 307 NLLVRSYKEIQKHIHGYLTNKSKIHVG--RAELFFEKLSVESEELYFLNKGNDIENNLCS 364
Query: 413 DGFKDRYYESKFDVPKDDIAFRLM-VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
+ +K YY K + + R+ + Y+ GL W L YY++GC SW W++P +YAP A
Sbjct: 365 NDYKMEYYVKKLNCSVSNNKERINDLIQTYIEGLHWCLYYYHKGCPSWNWFYPEYYAPLA 424
Query: 472 SD 473
SD
Sbjct: 425 SD 426
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 32/38 (84%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+DSP+ID+YP ++KID+NGKK W+GV +LPF++E L
Sbjct: 472 KDSPVIDYYPLEYKIDMNGKKNLWEGVVILPFINESNL 509
>gi|225684905|gb|EEH23189.1| 5'-3' exoribonuclease [Paracoccidioides brasiliensis Pb03]
Length = 1445
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 164/376 (43%), Positives = 230/376 (61%), Gaps = 60/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D +P ED+M +AIF I+ L+ ++P+KL +MAIDGVAPRAKMNQQR+R
Sbjct: 42 NCTH-RDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKKLFFMAIDGVAPRAKMNQQRAR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RFR + + AEVA+ EK + G +P E + FDSNCITPGT FMA+L+ L Y
Sbjct: 101 RFRTAYD-----AEVAK--EKAIKQGIEMPKE----AAFDSNCITPGTEFMAKLTQQLKY 149
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADL
Sbjct: 150 FINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQTKAQPGYHPDVRHCLYGLDADL 209
Query: 238 IMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
IMLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 210 IMLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM---------------- 253
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
VR + E ++ L FP+ ER +DD++ M FFVGNDFLP+LP+L I E
Sbjct: 254 ------VREYLELE-FQELEEEDALQFPFDLERIIDDFILMAFFVGNDFLPNLPNLHINE 306
Query: 355 GAVDRLVNLYKKTVYK 370
GA+ + +YK+ + K
Sbjct: 307 GALAWMFKIYKQVLPK 322
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 388 VKRSFDD--VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
V R +++ V E++ EE + +E F K+ YY+SKF D+ + YV
Sbjct: 487 VMRRYENAKVKETTAEEAQQAAEKKYERKFQEWKNNYYKSKFRWGMDNHEEMRKLTENYV 546
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GL WVL YYY+G SW W++ +HY+P SD + D NF+ G QP
Sbjct: 547 QGLQWVLYYYYRGVASWPWFYQYHYSPMISDVKLGLKADMNFDLG-QP 593
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF++E+RL KA+A L+ EE
Sbjct: 624 ESPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEEKRLLKAMATKEHLLTPEE 675
>gi|222622867|gb|EEE56999.1| hypothetical protein OsJ_06746 [Oryza sativa Japonica Group]
Length = 391
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 183/448 (40%), Positives = 244/448 (54%), Gaps = 90/448 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F+RWL +YPS++ P S+P + +DNLYLDMN IIH
Sbjct: 1 MGIPSFYRWLVNRYPSIVS---------------PAKESRPADGIVVYDNLYLDMNQIIH 45
Query: 61 PCTHPEDK-------PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
HP+D+ AP E+ ++F+ +DRLFRIVRPR+LLY+A+DGVAP AKMN
Sbjct: 46 YSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLYLAVDGVAPCAKMNG 105
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH------FDSNCITPGTPF 167
R R AE I R R++ G IL +E+ D N ITPGT F
Sbjct: 106 MRRGR------PAEAID---RSRKRHPCFGSILQASEEEEMQKISEGVSDPNVITPGTEF 156
Query: 168 MARLSACLHYYIHDRLNN-DPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT 226
M ++S L YYI RLN+ DPGWK I VILSDANVPGEGEHKIM +IR QR+ +DPNT
Sbjct: 157 MEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNT 216
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP 286
+HCL G DADLIML LA+HE +F+I+RE
Sbjct: 217 RHCLFGHDADLIMLALASHEVHFSILRE-------------------------------- 244
Query: 287 ESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
F+ + VLREYLE EL + + ER +DD++F+CF +GNDF+PH
Sbjct: 245 -------------FLNIWVLREYLEIELKILDPVCEPDIERLIDDFIFICFLMGNDFIPH 291
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESND 406
+PSLE++E A+D L+ +YK T K + E +K+S DV + E E +
Sbjct: 292 IPSLEMKEYALDLLIEVYKTTFNKMGGYIVNIEK-----ESLKKSCRDVLREASESERLE 346
Query: 407 EVRLWEDGF--KDRYYESKFDVPKDDIA 432
R ED F ++R Y+ D+ D+I+
Sbjct: 347 LSRKLEDRFFNEERPYDKVSDIQFDNIS 374
>gi|225557050|gb|EEH05337.1| exonuclease [Ajellomyces capsulatus G186AR]
Length = 1454
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 164/375 (43%), Positives = 232/375 (61%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENR--------IP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E+ E E L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELEFQELEEENA-LQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKVYKQVLPK 322
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F KD YY+SKF D+ + YV GL WVL Y
Sbjct: 493 VKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGMDNHEEMRQLTENYVQGLQWVLYY 552
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD E D NF+ G QP
Sbjct: 553 YYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLG-QP 590
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A L+ EE+
Sbjct: 621 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEEN 673
>gi|325093685|gb|EGC46995.1| exonuclease II Exo2 [Ajellomyces capsulatus H88]
Length = 1451
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 164/375 (43%), Positives = 232/375 (61%), Gaps = 58/375 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP++ E++ IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPAISQLIAENR--------IP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D P + ED+M +AIF I+ L+ ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPTFRMTEDKMFIAIFNYIEHLYGKIKPKQLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + G +P E+ FDSNCITPGT FMA+L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIKQGIEMPKEEA----FDSNCITPGTEFMAKLTQQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I+ +++ D W+G++++LS VPGEGEHKIM+YIR+ +AQP + P+ +HCL G DADLI
Sbjct: 151 INKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQSKAQPGYQPDIRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
MLGL +H+P+F ++REE + +Q + ++ Q + M C+
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFYLMHLCM----------------- 253
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
VR + E+ E E L FP+ ER +DD++ M FFVGNDFLP+LP+L I EG
Sbjct: 254 -----VREYLELEFQELEEENA-LQFPFDLERVIDDFILMAFFVGNDFLPNLPNLHINEG 307
Query: 356 AVDRLVNLYKKTVYK 370
A+ + +YK+ + K
Sbjct: 308 ALAWMFKVYKQVLPK 322
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F KD YY+SKF D+ + YV GL WVL Y
Sbjct: 493 VKETTAEEAQQAAEKKYELKFQEWKDNYYKSKFGWGMDNHEEMRQLTENYVQGLQWVLYY 552
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD E D NF+ G QP
Sbjct: 553 YYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLG-QP 590
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A L+ EE+
Sbjct: 621 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEEN 673
>gi|242023600|ref|XP_002432220.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
gi|212517617|gb|EEB19482.1| 5'-3' exoribonuclease, putative [Pediculus humanus corporis]
Length = 1587
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 189/551 (34%), Positives = 271/551 (49%), Gaps = 124/551 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP +R+++R+YP CV D V ++P F+N Y+D+N IIH
Sbjct: 1 MGVPRLYRFINRRYP-----CVTDY---VEVHQVP-----------HFENFYIDLNEIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C +D+ A E+ IF I+ LF +++P+KL ++++DGVAP+AKMN QR RRF+
Sbjct: 42 VCF--KDETASGKTKEIFSKIFTYIEFLFNLIKPKKLFFLSVDGVAPKAKMNNQRGRRFQ 99
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+KE + +KLLA+G +P E +F+S CI+PGT FM L L+Y+I
Sbjct: 100 AAKELENE-------NQKLLAEGKPIPDE-----NFNSLCISPGTEFMEELDKHLNYFIR 147
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ D W+ I VI S PGEGEHKIMDYIR R D DP +HC+ +DADL++L
Sbjct: 148 KKISTDSMWQKIVVIYSGYKTPGEGEHKIMDYIRYLRTTSDFDPYIRHCIYSSDADLMLL 207
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
GLA HE N +I+R + P+ + + E E + IF
Sbjct: 208 GLALHEINVSILRRD--PDSS-----------------------SKEKKSNASKEEKNIF 242
Query: 301 VRLSVLREYLEKELAMPN--LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
V LS+LR+YL+ E LPF Y E +DDW+ M F +GNDF+P+LP+++I V
Sbjct: 243 VHLSILRDYLDLEFQELKGCLPFEYDLEHLIDDWILMTFLMGNDFIPNLPNIQIDTNGVL 302
Query: 359 RLVNLYKKTVYKTQ-------------------------------------------EQL 375
++ YKK + QL
Sbjct: 303 VVLEAYKKIIQTLDGYINLNGYLNLPRFQKFLNKLSEHDMESFRETFADLAFLEGKCNQL 362
Query: 376 RQEENGGG-GGRGVKRSFD---------DVDESSEEEESNDEVRLWEDGF-------KDR 418
R EN KR D D+ E S+EEE++D+ +D F K
Sbjct: 363 RPFENDDDLSDESQKRKSDLEELIKSTNDMFEFSDEEENHDDDDDDDDTFLFEFKMKKKN 422
Query: 419 YYESK--FDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
YY K FD +DI+ L Y+ + W+L YY+ GC SW WY+P+HY+PF SD N
Sbjct: 423 YYSDKMCFDEMTEDISKNLT--KNYIQTIQWILFYYFHGCASWTWYYPYHYSPFLSDIKN 480
Query: 477 IAEVDTNFETG 487
+ + + G
Sbjct: 481 FEDYNLEYNKG 491
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSP+ DF+P+DFK DLNGKK W+ + L+PFVD++ + K P KL+ +E
Sbjct: 524 DSPLKDFFPDDFKRDLNGKKADWESIILIPFVDQDEVLKYTTPLRNKLTEKE 575
>gi|330040606|ref|XP_003239969.1| dhm exonuclease [Cryptomonas paramecium]
gi|327206895|gb|AEA39071.1| dhm exonuclease [Cryptomonas paramecium]
Length = 541
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 187/498 (37%), Positives = 258/498 (51%), Gaps = 72/498 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP V QKI N +FD YLDMNGI+H
Sbjct: 1 MGVPKFFRWISERYPLV-------------NQKII--------NQNDFDCFYLDMNGIVH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C + +P E + IF + LFRIV+P+KL++MA DGV+PRAKMNQQRSRRFR
Sbjct: 40 SCF--QKFSSPYREKNIFQEIFFYTEYLFRIVKPKKLIFMAFDGVSPRAKMNQQRSRRFR 97
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ ++ E++ FDSNCITPGT FM RLS ++
Sbjct: 98 TKETNMKQNKNFTHSNEEV----------------FDSNCITPGTEFMKRLSFFFKKWLK 141
Query: 181 DRLNNDPGWK-GIKVILSDANVPGEGEHKIMDYIRK-QRAQPDHDPNT-QHCLCGADADL 237
+++ D WK G VI S + VPGEGEHKIM+YIRK Q+ + +T +HCL G DADL
Sbjct: 142 NKVKFDSEWKQGCDVIFSSSEVPGEGEHKIMNYIRKIQKVYFQYKKSTLKHCLYGLDADL 201
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IMLGL +HE NFT++RE+ G + C LD N SE E
Sbjct: 202 IMLGLLSHEKNFTLLREKIFHR--------GTTTFNKETC--LDKNLN-----LLMSE-E 245
Query: 298 FIFVRLSVLREYLEKELA-MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
F + +S+LR+ + E + F Y ER +DD++FMC +GNDF+P LP L I +G
Sbjct: 246 FHLLEISLLRDMIFLEFKPKKTILFKYDVERIIDDFIFMCMLLGNDFIPGLPHLNITQGG 305
Query: 357 VDRLVNLYKKTVYKTQEQL-RQEENGGGGGRGVKRSFDDVDES-----SEEEESNDEVRL 410
++ LV YK+ K L ++ + G R ES ++E++ +E
Sbjct: 306 LNLLVRSYKEIQQKLDGYLTKKHQIHFGRAELFFRKISSEAESLFFFRRKQEKTGNET-- 363
Query: 411 WEDGFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
+K YY SKF + + F + Y+ GL W L YY++ C SW W++P +Y+P
Sbjct: 364 ----YKSSYYLSKFKFTYQIEHGFLSNLIKNYIHGLHWCLFYYHKKCPSWNWFYPEYYSP 419
Query: 470 FASDFINIAEVDTNFETG 487
SD +N+ + F G
Sbjct: 420 LCSDLVNLCPFEIFFTKG 437
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Query: 645 MAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEER 700
+A ++ F+P FA + SP+ FYP ++KIDLNGKK W+G+ LLPF+DE +
Sbjct: 447 LAVLPPRSSVFLPSS-FANLMLNEKSPVKCFYPYEYKIDLNGKKNVWEGIVLLPFIDENK 505
Query: 701 LHKALAPYY--EKLSVEESE 718
L A+ + E+LS++E E
Sbjct: 506 LLDAIKMFIKKEQLSIQEKE 525
>gi|440793174|gb|ELR14365.1| Exonuclease ii, putative [Acanthamoeba castellanii str. Neff]
Length = 1421
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 203/317 (64%), Gaps = 42/317 (13%)
Query: 55 MNGIIHPCTHPE--DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
MNGIIH CTHPE D K E EM++ IF IDRLF V+P+KL+Y+AIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHPEWNDNVLNKLSEKEMIIQIFHYIDRLFHAVKPQKLIYLAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
NQQR RR R ++E+ E + + EK+ D FDSNCITPGT FMA+L
Sbjct: 61 NQQRQRRLRTAQESKEALEKARETGEKVQED------------MFDSNCITPGTEFMAKL 108
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
S L Y+I ++ D W+ ++VILS VPGEGEHKIM+YIR+Q+ P+HDPNT+HCL
Sbjct: 109 SDYLKYFIRKKIKEDSAWRKVEVILSGHEVPGEGEHKIMEYIRRQKMLPEHDPNTRHCLY 168
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIML LA+HEP+F ++REE G K+ PE+
Sbjct: 169 GLDADLIMLALASHEPHFALLREEVT------------FGRRKKK---------PEATP- 206
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+ + +FV L LREYL++E LPF Y ER +DD+V CFFVGNDFLP+LP ++
Sbjct: 207 --PKFQLLFVNL--LREYLDEEFRT-ELPFGYDLERVIDDFVLFCFFVGNDFLPNLPYMD 261
Query: 352 IREGAVDRLVNLYKKTV 368
I +GA+D++ ++Y++ +
Sbjct: 262 IADGALDKMFDIYRELL 278
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+K+ YY KF + ++ + + Y+ GL WVL+YYY+GC SW W+FPFHYAP SD
Sbjct: 438 WKNWYYRDKFRIGLENEEYHKHLRTSYLEGLVWVLRYYYRGCCSWNWFFPFHYAPLCSDL 497
Query: 475 INIAEVDTNFETGT 488
+N+ F+ GT
Sbjct: 498 VNLTSYKLKFDLGT 511
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 36/40 (90%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
SPIIDFYPE+FK+D+NGK+ AW+ +AL+PF+DE+RL A+
Sbjct: 544 SPIIDFYPEEFKVDMNGKRNAWEAIALIPFIDEKRLLDAM 583
>gi|170043138|ref|XP_001849256.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
gi|167866570|gb|EDS29953.1| 5'-3' exoribonuclease 1 [Culex quinquefasciatus]
Length = 1609
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/368 (43%), Positives = 219/368 (59%), Gaps = 59/368 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E ++P +FDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRYMSERYP-----CLGELVRE---NQVP-----------DFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+++ IF ++ LFR++RP+KL ++A+DGVAPRAKMNQQR RR
Sbjct: 42 NCSHPNDSDVFFRITEEQIFSDIFHYLEFLFRMIRPQKLFFIAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR+++E E++ + + G +LP E + FDSNCITPGT FM RL L ++
Sbjct: 102 FRSAREAQEQVEQAEK-------KGDVLPLE----ARFDSNCITPGTSFMVRLQRALEHF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I +++ +P WK KV+LS PGEGEHKIM+YIR +A P D NT+HCL G DADLI
Sbjct: 151 IKVKVSTNPLWKHCKVVLSGHETPGEGEHKIMEYIRHAKASPGFDSNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL THE +F+++REE K G K+ S++ E F
Sbjct: 211 MLGLCTHERHFSLLREEVK------------FGKNDKKS----------SIV---EETRF 245
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ L++LREYLE E A L F ++ + +DDWV M + VGNDF+PHLP+L I E A
Sbjct: 246 YLLHLTLLREYLELEFAPVRDKLKFEFNPYKLIDDWVLMGYMVGNDFIPHLPNLHINENA 305
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 306 LPTLFQAY 313
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 375 LRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDI 431
L +E+GGG + S +D++ E L+E F K YY +K +
Sbjct: 399 LDDDEDGGGE----RYSTEDIENDPE---------LFEKEFAAYKRNYYMTKMGYGDFNE 445
Query: 432 AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
R Y+ L W L YYY+G SW WY+P HYAPF SD N + NFE G
Sbjct: 446 ETRAEQAECYIRALQWTLLYYYRGVSSWAWYYPHHYAPFISDVQNFKNIKLNFEMG 501
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS +ID+YPE+F DLNGK+ AW+ V L+PF+DE+RL KA+ P L+ EE +
Sbjct: 534 DSSVIDYYPENFGTDLNGKQQAWEAVVLIPFIDEKRLLKAMEPCDAFLTDEEKQ 587
>gi|401883118|gb|EJT47352.1| hypothetical protein A1Q1_03823 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1499
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 191/294 (64%), Gaps = 38/294 (12%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
M++AIF ID LF ++PRK+ +MAIDGVAPRAKMNQQRSRRFR +++ EK R
Sbjct: 1 MILAIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREK-------R 53
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E+ L G LP EK FDSNCITPGTPFMARLS L YY+ R++ D W+G+KVIL
Sbjct: 54 EEALRKGETLPEEKA----FDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVIL 109
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
S VPGEGEHKIMD+IRK +AQP ++PNT+HCL G DADL+MLGL +H+P+F+++REE
Sbjct: 110 SGHEVPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEV 169
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL-- 314
G + K+ V L + + LS+LREYL+ E
Sbjct: 170 T------------FGRKAKKNVSL-------------ANSNMFLLHLSLLREYLDMEFQS 204
Query: 315 AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
++ F Y ER +DDW+ M FFVGNDFLPHLP L I EGA++ + +YK+ +
Sbjct: 205 VAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEIL 258
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ Y+ GL W+L YYY+G +W W++ +HYAP SD +IA +F+ G
Sbjct: 495 YRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIG 543
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP+ F +D+NGKK W+ V +PF++E+RL + +A ++L+ EE
Sbjct: 577 SPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTMAQREQRLTPEE 627
>gi|406702486|gb|EKD05502.1| hypothetical protein A1Q2_00263 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1568
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 191/294 (64%), Gaps = 38/294 (12%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
M++AIF ID LF ++PRK+ +MAIDGVAPRAKMNQQRSRRFR +++ EK R
Sbjct: 1 MILAIFAYIDFLFTKIKPRKVFFMAIDGVAPRAKMNQQRSRRFRTARDAREK-------R 53
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
E+ L G LP EK FDSNCITPGTPFMARLS L YY+ R++ D W+G+KVIL
Sbjct: 54 EEALRKGETLPEEKA----FDSNCITPGTPFMARLSEHLKYYVRKRISEDAEWRGVKVIL 109
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
S VPGEGEHKIMD+IRK +AQP ++PNT+HCL G DADL+MLGL +H+P+F+++REE
Sbjct: 110 SGHEVPGEGEHKIMDFIRKTKAQPGYNPNTRHCLYGLDADLVMLGLISHDPHFSLLREEV 169
Query: 257 KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL-- 314
G + K+ V L + + LS+LREYL+ E
Sbjct: 170 T------------FGRKAKKNVSL-------------ANSNMFLLHLSLLREYLDMEFQS 204
Query: 315 AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
++ F Y ER +DDW+ M FFVGNDFLPHLP L I EGA++ + +YK+ +
Sbjct: 205 VAESISFEYDLERIIDDWILMGFFVGNDFLPHLPGLHINEGALETIWKIYKEIL 258
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ Y+ GL W+L YYY+G +W W++ +HYAP SD +IA +F+ G
Sbjct: 495 YRYIEGLQWILYYYYKGVPAWGWFYNYHYAPMISDLKDIASFKFDFDIG 543
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP+ F +D+NGKK W+ V +PF++E+RL + +A ++L+ EE
Sbjct: 577 SPIIDFYPKIFDLDMNGKKQDWEAVVKIPFINEDRLLRTMAQREQRLTPEE 627
>gi|403368617|gb|EJY84145.1| 5'-3' exoribonuclease 2 [Oxytricha trifallax]
Length = 1735
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 225/377 (59%), Gaps = 61/377 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FF+WL+R+YP V++ + +++P DNLYLD+NGI+H
Sbjct: 1 MGIPKFFKWLTRRYPQVLLDIKRE-------EQVP-----------PIDNLYLDLNGIVH 42
Query: 61 PCTHPEDK------PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
C H D ++ +E+ + I + ID L ++P+KLL++A+DGVAPRAKMNQQ
Sbjct: 43 NCIHGNDAKLHERVSQLENFEEVWINIMKAIDELVHTIKPKKLLFLAVDGVAPRAKMNQQ 102
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
R+RRFR +K++ +++K +G KE + FDSN I+PGT FM LS
Sbjct: 103 RARRFRTAKDSQ-------LLKDKFQKEG------KEAPTLFDSNAISPGTKFMEELSKQ 149
Query: 175 LHYYIHDRLNNDPGWKGI-KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L +++ + N DP ++ + KVILSDA VPGEGEHK+MD+IR+ + ++DPNT+HC GA
Sbjct: 150 LDFFVQYKQNTDPVYQNLEKVILSDAFVPGEGEHKMMDFIRQAKHDENYDPNTRHCFYGA 209
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DADLIML L THEPNF I+REE + R G ++K T
Sbjct: 210 DADLIMLSLLTHEPNFIILREE---HVVRKIKQGGVQRLDLKR--------------TNN 252
Query: 294 SEVEFIFVRLSVLREY--LEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
+V FI ++LREY LE P + + ER +DD+VF CFF+GNDFLP L +L+
Sbjct: 253 YQVMFI----NLLREYFLLEYRAVAPQMKMKFDLERIIDDFVFFCFFIGNDFLPSLSALD 308
Query: 352 IREGAVDRLVNLYKKTV 368
I EG++D +++LYK+ +
Sbjct: 309 IGEGSLDSIIDLYKRLL 325
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 416 KDRYYESK--FDVPK-DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
K YY +K FDV + + + + +Y+ GL WVL YYY+G + W+WY+P+HYAP S
Sbjct: 568 KAMYYRAKVKFDVTTIEGRSLKKKMLMKYLEGLQWVLYYYYRGAQHWRWYYPYHYAPMIS 627
Query: 473 DF 474
D
Sbjct: 628 DL 629
>gi|440792617|gb|ELR13826.1| exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1110
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/261 (57%), Positives = 184/261 (70%), Gaps = 4/261 (1%)
Query: 111 MNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAR 170
MNQQRSRRF+A KE+ EK + A I ++++ G +PP KE HFDSN ITPGTPFMA+
Sbjct: 1 MNQQRSRRFKAIKESKEKAEKEAEIVQEMIRMGKEIPP-KEDKPHFDSNTITPGTPFMAK 59
Query: 171 LSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCL 230
++ L YYI +RL DPGWKGIKVILSDA+VPGEGEHKIMDYIR QR+QP+++PNT H L
Sbjct: 60 VAQSLQYYIKERLLTDPGWKGIKVILSDASVPGEGEHKIMDYIRYQRSQPEYEPNTSHVL 119
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
G DADLIML LATHEP+F I+RE C +CGQ GH +C G E ++
Sbjct: 120 YGLDADLIMLALATHEPHFFILREIVMQANENNCFICGQPGHLASDCQGKAKEKGNDTDT 179
Query: 291 TFGSEVEFIFVRLSVLREYLEKEL---AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
F F+ +SVLREYL ++L LPF + ER +DD+VFMCFFVGNDFLPHL
Sbjct: 180 KAAIRKPFQFLYVSVLREYLTRDLKPSQAQQLPFEFDLERIIDDFVFMCFFVGNDFLPHL 239
Query: 348 PSLEIREGAVDRLVNLYKKTV 368
P+LEIRE A+D LV +YK+ +
Sbjct: 240 PTLEIRENAIDMLVRIYKRIL 260
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 57/92 (61%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
D EE E D+VRL + G+K+RYY+ KFDV D F V EY GL WVL+YYYQG
Sbjct: 409 DPDEEEPEIPDDVRLGDPGWKERYYKLKFDVEITDKEFIKKVAMEYTEGLVWVLRYYYQG 468
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
C SW W++PFHYAPFA D I + E G
Sbjct: 469 CSSWGWFYPFHYAPFADDMTLIDDESPKHELG 500
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP DF +D+NGK++AWQ VALLPF+DE RL + + S EE E
Sbjct: 534 SPIIDFYPNDFALDMNGKRWAWQAVALLPFIDENRLKEVMKECEPHFSAEEQE 586
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 581 KLFSRML-TYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFK 630
+++ R+L T G+LT G+V L RV+++M+++G +ED I +R++ E K
Sbjct: 254 RIYKRILPTLGGYLTHDGEVDLRRVKVLMEEVGRLEDSILVERRRKEQRAK 304
>gi|260944866|ref|XP_002616731.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
gi|238850380|gb|EEQ39844.1| hypothetical protein CLUG_03972 [Clavispora lusitaniae ATCC 42720]
Length = 327
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 210/315 (66%), Gaps = 14/315 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRW+SRKYP +I VED G ++P S PNPNG E DNLYLDMNGI+H
Sbjct: 1 MGVPAFFRWISRKYPKIISPVVEDVGDPQFG-RVP-QYSDPNPNG-ELDNLYLDMNGIVH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC+HPE KPAP+ EDEM + +F+ +R+ + RPRK+L +A+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCSHPEHKPAPETEDEMFLDVFKYTERVLMMARPRKVLMIAVDGVAPRAKMNQQRARRFR 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+++ E R + A G + + +D+N ITPGTPFM L+ L Y++
Sbjct: 118 AAQDARAAAEEKERQIREFEARGQAIDDAIKGKKSWDTNAITPGTPFMDGLALALRYWVA 177
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L +DPGW+ ++VI+SDA VPGEGEHK+M +IR QRA P +D NT+HC+ G DADLI L
Sbjct: 178 HKLASDPGWRDLQVIVSDATVPGEGEHKLMSFIRSQRADPQYDANTRHCIYGLDADLIFL 237
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLD-AEPNPESVITFGSEVEFI 299
GLATHEP+F ++RE DV Q M+ L + +++ ++ F+
Sbjct: 238 GLATHEPHFRVLRE----------DVFAQGNGRMRVADQLQITQDQRDAIAEQDAKKPFL 287
Query: 300 FVRLSVLREYLEKEL 314
++ ++VLREYLE EL
Sbjct: 288 WLHVNVLREYLEVEL 302
>gi|402582266|gb|EJW76212.1| hypothetical protein WUBG_12878 [Wuchereria bancrofti]
Length = 410
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/233 (61%), Positives = 168/233 (72%), Gaps = 5/233 (2%)
Query: 193 KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTII 252
KVILSDANVPGEGEHKIMD+IR+QRA P HDPNT HCLCGADADLIMLGLATHEPNF II
Sbjct: 5 KVILSDANVPGEGEHKIMDFIRRQRASPSHDPNTVHCLCGADADLIMLGLATHEPNFNII 64
Query: 253 REEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT-FGSEVEFIFVRLSVLREYLE 311
REEF PNQ RPCD+CGQ GH++ +C GL ++ N E + E FIF+RL VLREYLE
Sbjct: 65 REEFVPNQQRPCDLCGQYGHDLNDCKGLASDDNSECQSSPLQKETNFIFIRLPVLREYLE 124
Query: 312 KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
+EL +PN P+ ERA+DDWVFMCFFVGNDFLPHLPSLEIRE A+DRLV LYK V +
Sbjct: 125 RELHIPNCSIPFDLERAIDDWVFMCFFVGNDFLPHLPSLEIRENAIDRLVKLYKDMVCEM 184
Query: 372 QEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF 424
+ L ++G V+ D + E +E + + R E FK R E K+
Sbjct: 185 KGHL--TDSGIVHIERVQIILDKLGEVEDEIFKSRQER--EQQFKRRNKEKKW 233
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/59 (66%), Positives = 44/59 (74%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+ SS E+E+ DEVRLWEDG+KDRYY+SKF V DI FR V YV GLCWVL YYYQ
Sbjct: 313 NNSSSEDEAFDEVRLWEDGWKDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQ 371
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 10/87 (11%)
Query: 581 KLFSRMLT-YPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRR 639
KL+ M+ G LTDSG V +ERVQ+I+ LG +EDEIFK RQ+ E FK RNK KK R
Sbjct: 175 KLYKDMVCEMKGHLTDSGIVHIERVQIILDKLGEVEDEIFKSRQEREQQFKRRNKEKKWR 234
Query: 640 ERQMKMAAQSTKAPSFIP--GGQFAPQ 664
ER + PS+IP G +PQ
Sbjct: 235 ER-------TFATPSYIPSRGSLLSPQ 254
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 81 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
IFE IDRLF IVRPRKLLYMAIDGVAPRAK+
Sbjct: 374 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 404
>gi|427788379|gb|JAA59641.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1628
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/460 (36%), Positives = 232/460 (50%), Gaps = 98/460 (21%)
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLAD-GCILPPE 149
+++P+K +MA+DGVAPRAKMNQQR RRF+++KE A+ +EK D G +LP E
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKE--------AQAQEKEARDRGEVLPTE 52
Query: 150 KEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKI 209
+ FDSNCI+PGT FMARL L ++ +++ DP W+G+KV LS PGEGEHK+
Sbjct: 53 E----RFDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKV 108
Query: 210 MDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQ 269
MD+IR +R+QP +DPNT+HCL G DADLIMLG+ +HEP+F ++REE V G+
Sbjct: 109 MDFIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEI---------VYGK 159
Query: 270 MGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFER 327
++ + + E+ F + LS+LREYLE E +PF + +
Sbjct: 160 RQNQKR--------------LNVPEEITFHLLHLSLLREYLELEFQELKKTIPFEFKMDN 205
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL--------------VNLYKKT------ 367
+DDWV MCF VGNDFLPHLP+L I A+ L +N Y K
Sbjct: 206 IIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFE 265
Query: 368 ----------------VYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
V Q+ L + G+ + E+ + DE RL
Sbjct: 266 KFLTRLSQFDYEKFTDVQADQKFLASKRAYAEAPNGIVQQNGSPPSGKEKTKDPDEKRLL 325
Query: 412 E----------DGFKDR--------------YYESKFDVPKDDIAFRLMVGHEYVLGLCW 447
E D +D+ YY +K + + H YV + W
Sbjct: 326 EKFSHLDIPDFDSDEDQEGLLEMEFRQHKRDYYVNKLEYADVNKEVMQEQAHGYVRAIQW 385
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
L YYY G +SW WY+P HY+P+ SD + +D FE G
Sbjct: 386 NLHYYYNGVQSWNWYYPHHYSPYISDIKDFQNLDMTFELG 425
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++SPI+D+YP+DF DLNGK+ W+ V L+PF++E RL A+ +EKL+ EE
Sbjct: 457 EESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEEGRLLPAMEERFEKLTEEE 509
>gi|403216681|emb|CCK71177.1| hypothetical protein KNAG_0G01190 [Kazachstania naganishii CBS
8797]
Length = 1493
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 210/373 (56%), Gaps = 59/373 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P + Q + G +IP EFDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYISERWPMI--------SQLIEGSQIP-----------EFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH D K E+E+ IF ID LF ++P+K+ YMAIDGVAPRAKMNQQRSRR
Sbjct: 42 TCTHGNDDDVTKRMTEEEVFAKIFSYIDHLFLTIKPQKVFYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + +K L G +P G FDSN ITPGT FMA+L+ L Y+
Sbjct: 102 FRTAMDAENML-------KKALQRGEEIP----SGEPFDSNSITPGTEFMAKLTKNLKYF 150
Query: 179 IHDRLNNDPGWKG-IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
IHD+++ND W G +++I S VPG G HKIM +IR R+Q D NT+HC+ G DADL
Sbjct: 151 IHDKISNDSNWSGDVEIIFSGHEVPGRGRHKIMSFIRNLRSQDGFDNNTRHCIYGLDADL 210
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IML L+ H P+F ++REE G+ G K E
Sbjct: 211 IMLSLSAHAPHFALLREE--------VVFGGRRGQRPKAL----------------EEQN 246
Query: 298 FIFVRLSVLREY--LEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
F + +S+LREY LE + L F Y FER LDD++ + F +GNDFLP+LP L + +G
Sbjct: 247 FFLLHISLLREYMGLEFQEIADELKFTYDFERVLDDFILVMFVIGNDFLPNLPDLHLNKG 306
Query: 356 AVDRLVNLYKKTV 368
A L+ +K+ +
Sbjct: 307 AFPVLLQTFKEAL 319
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 645 MAAQSTKAPSFIPGG----QFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEER 700
MA ++ + IP + P +SPIIDFYP K+D+NGK W+ V LL FVDE+R
Sbjct: 597 MAVLPERSKNLIPAALRPLMYDP-NSPIIDFYPASVKLDMNGKTADWEAVVLLSFVDEQR 655
Query: 701 LHKALAPYYEKLSVEESE 718
L +A+ PY KL+ EE E
Sbjct: 656 LVEAMKPYLAKLTPEERE 673
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
D +K++YY+ K D + + YV GL WVL YYY+GC SW WY+ HYAP S
Sbjct: 513 DKWKNQYYKEKLGYGSQDDDKIVDLTKNYVEGLQWVLYYYYRGCPSWGWYYQHHYAPRIS 572
Query: 473 DFINIAEVDTNFETG 487
D + F+ G
Sbjct: 573 DLARGLDQIIKFDLG 587
>gi|147771605|emb|CAN69284.1| hypothetical protein VITISV_028679 [Vitis vinifera]
Length = 321
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/292 (52%), Positives = 199/292 (68%), Gaps = 26/292 (8%)
Query: 75 DEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVAR 134
+++ +IF+ ID LF +VRPR+LLYMAIDGVAPRAKMNQQRSRRFRA+K+ AE AE R
Sbjct: 30 NDVFKSIFDYIDHLFSLVRPRRLLYMAIDGVAPRAKMNQQRSRRFRAAKDAAEAEAEEER 89
Query: 135 IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKV 194
+R++ +G +L P KEK DSN ITPGT FMA LS L YYIH RLN +PGW KV
Sbjct: 90 LRKEFEVEGKMLSP-KEKPETSDSNVITPGTKFMAVLSVALQYYIHSRLNRNPGWCSTKV 148
Query: 195 ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE 254
ILSD+NVPGEGEHKIM YIR QR +PNT+HCL G +M+
Sbjct: 149 ILSDSNVPGEGEHKIMSYIRSQRNLLGFNPNTRHCLYG-----LMIT------------- 190
Query: 255 EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL 314
P Q C +CGQ+GH EC G++ + T + ++ F+ + VLREYL+ +L
Sbjct: 191 --PPGQQEKCYLCGQVGHLAAECRGIEVVDD-----TPIHKKKYQFLNIWVLREYLQYDL 243
Query: 315 AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
+ N PF +FER LDD+VF+CFFVGNDFLPH+P+LEIREGA++ L+++Y++
Sbjct: 244 EILNPPFEINFERLLDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHVYRR 295
>gi|427780147|gb|JAA55525.1| Putative 5'-3' exonuclease hke1/rat1 [Rhipicephalus pulchellus]
Length = 1163
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 170/460 (36%), Positives = 234/460 (50%), Gaps = 98/460 (21%)
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLAD-GCILPPE 149
+++P+K +MA+DGVAPRAKMNQQR RRF+++KE A+ +EK D G +LP E
Sbjct: 1 MIKPKKTFFMAVDGVAPRAKMNQQRGRRFKSAKE--------AQAQEKEARDRGEVLPTE 52
Query: 150 KEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKI 209
+ FDSNCI+PGT FMARL L ++ +++ DP W+G+KV LS PGEGEHK+
Sbjct: 53 ER----FDSNCISPGTEFMARLQDQLQQFVATKVSTDPLWRGVKVYLSGHQTPGEGEHKV 108
Query: 210 MDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQ 269
MD+IR +R+QP +DPNT+HCL G DADLIMLG+ +HEP+F ++REE V G+
Sbjct: 109 MDFIRTERSQPGYDPNTRHCLYGLDADLIMLGMCSHEPHFALLREEI---------VYGK 159
Query: 270 MGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFER 327
++ + V PE E+ F + LS+LREYLE E +PF + +
Sbjct: 160 RQNQKRLNV-------PE-------EITFHLLHLSLLREYLELEFQELKKTIPFEFKMDN 205
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL--------------VNLYKKT------ 367
+DDWV MCF VGNDFLPHLP+L I A+ L +N Y K
Sbjct: 206 IIDDWVLMCFLVGNDFLPHLPNLHIAHNALPVLYQAYIDVMPSLGGYINEYGKLNLERFE 265
Query: 368 ----------------VYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
V Q+ L + G+ + E+ + DE RL
Sbjct: 266 KFLTRLSQFDYEKFTDVQADQKFLASKRAYAEAPNGIVQQNGSPPSGKEKTKDPDEKRLL 325
Query: 412 E----------DGFKDR--------------YYESKFDVPKDDIAFRLMVGHEYVLGLCW 447
E D +D+ YY +K + + H YV + W
Sbjct: 326 EKFSHLDIPDFDSDEDQEGLLEMEFRQHKRDYYVNKLEYADVNKEVMQEQAHGYVRAIQW 385
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
L YYY G +SW WY+P HY+P+ SD + +D FE G
Sbjct: 386 NLHYYYNGVQSWNWYYPHHYSPYISDIKDFQNLDMTFELG 425
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQ---FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q MA + + +P ++SPI+D+YP+DF DLNGK+ W+ V L+PF++E
Sbjct: 432 QQLMAILPSASKKLVPSAYQDLMENEESPILDYYPKDFNTDLNGKQHDWEAVVLIPFIEE 491
Query: 699 ERLHKALAPYYEKLSVEE 716
RL A+ +EKL+ EE
Sbjct: 492 GRLLPAMEERFEKLTEEE 509
>gi|242067311|ref|XP_002448932.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
gi|241934775|gb|EES07920.1| hypothetical protein SORBIDRAFT_05g001880 [Sorghum bicolor]
Length = 712
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 237/467 (50%), Gaps = 101/467 (21%)
Query: 71 PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIA 130
P E+ ++FE +DRLFRIVRP +LLY+A+DGVAP AKMN+ R RF +++ +
Sbjct: 27 PMTVSEVFESLFEYMDRLFRIVRPTRLLYLAVDGVAPCAKMNRVRRGRFHSARMATSEEI 86
Query: 131 EVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWK 190
E +R++L A G P+ E D N ITPGT FM +LS L YYI R N+DP W+
Sbjct: 87 EDYEMRKELRAQGKEETPQ-EISEVSDPNVITPGTEFMEKLSQALEYYIRGRFNSDPWWR 145
Query: 191 GIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFT 250
I VILSDANVPGEGEHKIM ++R Q +DPNT+HCL G DADLIML LA+HE +F+
Sbjct: 146 DIMVILSDANVPGEGEHKIMSFVRAQGNMEGYDPNTRHCLFGHDADLIMLALASHEVHFS 205
Query: 251 IIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYL 310
I+RE F+ + VLREYL
Sbjct: 206 ILRE---------------------------------------------FLNIWVLREYL 220
Query: 311 EKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLV--------- 361
E E + + ER +DD++F+CF +GNDF+PH+PSLE EGAVD L+
Sbjct: 221 EIEFKILDPVCEPDIERLIDDFIFICFLMGNDFIPHIPSLETHEGAVDLLIEVYKTTFNK 280
Query: 362 -------------------------------NLYKKTVYKTQEQLRQE-----------E 379
++Y++ ++ + +L Q+ E
Sbjct: 281 MGGYIINTDKVKDKNGAYLEVSRLEIFFHELSMYEEKIFLKRYKLEQDLLLKTYHEMLRE 340
Query: 380 NGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM--V 437
+++ DD+ EE D +RL G+K R++ F + +L +
Sbjct: 341 ASESERPELRQKLDDL--LFNEERPYDRIRLGLPGWKSRFFREYFGAETSNEIGKLQNDM 398
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
+Y+ GLCWVL+ Y+ SW WY+PF+ APF SD ++ VD +F
Sbjct: 399 AQKYLEGLCWVLQCYFADVPSWSWYYPFYVAPFVSDLKGLSRVDISF 445
>gi|290978067|ref|XP_002671758.1| predicted protein [Naegleria gruberi]
gi|284085329|gb|EFC39014.1| predicted protein [Naegleria gruberi]
Length = 1261
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/377 (44%), Positives = 228/377 (60%), Gaps = 56/377 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+WLS +YP + E IP DNLYLDMNGIIH
Sbjct: 1 MGVPRLFKWLSERYPCIASSLTE--------ATIP-----------TVDNLYLDMNGIIH 41
Query: 61 PCTHPEDK-PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH +D+ A E EM++ IF ID+LF++++P K ++A+DGVAPRAKMNQQRSRRF
Sbjct: 42 NCTHKDDELKAQLTEKEMILKIFRYIDQLFQLIKPSKHFFLALDGVAPRAKMNQQRSRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R K+ + ++R+KL G +P E+ + FDSNCITPGT FMA+LS L Y+I
Sbjct: 102 R-------KVFDEQQLRKKLEQKGEKVP---ERDNLFDSNCITPGTEFMAKLSMHLKYFI 151
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
H ++ D W+ KVILS VPGEGEHKIM++IR ++ + + PN +HCL G DADLI
Sbjct: 152 HSKMQTDIKWQQCKVILSGHEVPGEGEHKIMNFIRGRKMEAGYQPNERHCLYGLDADLIC 211
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQM-GHEMKECVGLDAEPNPESVITFGSEVEF 298
LGL THEP+F ++RE DV Q ++ KE +P E +F
Sbjct: 212 LGLVTHEPHFMLLRE----------DVFEQYRNNDSKEKSS--NKPFAE---------KF 250
Query: 299 IFVRLSVLREYLEKE----LAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+ L LR+YL+ E L L F Y ER +DD+VF FF GNDFLPH+P+L+I+E
Sbjct: 251 HLLHLCALRQYLDFEFRQALLEQKLSFEYDLERIIDDFVFFIFFTGNDFLPHMPTLDIKE 310
Query: 355 GAVDRLVNLYKKTVYKT 371
G+++ ++++YK+ + K+
Sbjct: 311 GSINTMIDIYKQILPKS 327
>gi|328865598|gb|EGG13984.1| 5'-3' exoribonuclease [Dictyostelium fasciculatum]
Length = 1808
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 192/532 (36%), Positives = 273/532 (51%), Gaps = 117/532 (21%)
Query: 9 WLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDK 68
W S +YP +I + V+ P E +DNLYLDMNGIIH C+
Sbjct: 208 WASERYPQIIQNLVDSNPPE-------------------YDNLYLDMNGIIHACSQEMTT 248
Query: 69 PAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAE 127
+ E+E++ + ID+LF I+RP KLLYMAIDGVAPR+K+NQQR RRF + +
Sbjct: 249 KLIRFSEEELIRLVCNYIDKLFHIIRPTKLLYMAIDGVAPRSKLNQQRQRRFLSVFREEK 308
Query: 128 KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDP 187
+ E+ + ++L PE F N ITPGT FM+ LS CL ++I +++ D
Sbjct: 309 EKKELIKEGKEL--------PE----VIFSRNAITPGTEFMSNLSECLQFFIKKKISEDL 356
Query: 188 GWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEP 247
W+ I++I S PGEGEHKI+DYIRK +A PD DPN HCL G DADLI+L L THEP
Sbjct: 357 SWREIEIIFSGPENPGEGEHKIIDYIRKYKASPDWDPNQSHCLYGLDADLILLALVTHEP 416
Query: 248 NFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSV 305
+F+I+REE F+P + D F + +S+
Sbjct: 417 HFSILREEIAFRPQANKQLD--------------------------------FQLLHISL 444
Query: 306 LREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYK 365
LREY+E EL L F YS ER +DD+V + F GNDFLPHLP EI G ++ ++ LYK
Sbjct: 445 LREYMELELKC-ELDFGYSLERIIDDFVLVMIFFGNDFLPHLPFCEISTGGLNSVLELYK 503
Query: 366 KT---------------------------VYKTQEQL---RQEENGGGGGRGVKRSFDDV 395
+ V++ ++ L EEN ++ D
Sbjct: 504 NSLNELGGYLTDEAEIDLDRLAVFLAKIAVFERKQNLTVGEAEENEVVEDMLLENDVQDD 563
Query: 396 DESSEEEE---------------SNDEVRLWEDGFKDRYYESKF-DVPKDD----IAFRL 435
+E E E +D+V D + + YY SKF D P+++ + ++
Sbjct: 564 EEKKEIERRAFERLKNHFGEITFEDDDVEDINDYWINGYYRSKFPDFPEENRSAIVDYKR 623
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ +YV GL WVL YY+ GC SW+WY+P++YAP A D +++ ++ FE+
Sbjct: 624 HLVLKYVEGLSWVLNYYHNGCISWRWYYPYYYAPLAVDMRDLSSLEIEFESN 675
>gi|440299483|gb|ELP92037.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 661
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 247/503 (49%), Gaps = 88/503 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+FF W+ S+ + P+ + D + N G +FD ++D NGI+H
Sbjct: 1 MGVPSFFAWVC----SMCKDYTKYLPKNIQED----DLREQNHCGRDFDTFFIDFNGIVH 52
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+HP AP E E+ IF +D VRPRKL+Y+A+DGV P AK+ QQR RR+
Sbjct: 53 NCSHPAHDVAPVSEAELFDRIFAQLDHYINYVRPRKLVYIAVDGVCPFAKIVQQRKRRYI 112
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+++ + G+ FDSNCITPGTPFM RLS LH Y+
Sbjct: 113 SARGNS--------------------------GTSFDSNCITPGTPFMERLSVALHAYVT 146
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ + W + VILS+ NVPGEGEHKI D++RK+ D N +HC+ G DADLIML
Sbjct: 147 NRMDTNLYWSSLSVILSNPNVPGEGEHKIFDFLRKESKNTDF-ANLKHCVYGMDADLIML 205
Query: 241 GLATHEPNFTIIREEF---KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
LA++ P IIREE KPN CDVC + H + G V
Sbjct: 206 TLASNLPFVYIIREEMEFTKPNII--CDVC-HLNHRTNQ---------------HGKPVN 247
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERA--LDDWVFMCFFVGNDFLPHLPSLEIREG 355
I +VL +L E A R ++D+V + F VGNDFLP +PSL+++ G
Sbjct: 248 LILCDPNVLSTWLITECAKTCEMKMEDISRVELINDFVLITFLVGNDFLPKIPSLKVQSG 307
Query: 356 AVD--------------RLVN-----------LYKKTVYKTQEQLRQEENGGGGGRGVKR 390
++ RL N ++ K + E L+ + VK+
Sbjct: 308 GMEIILKYYWPLFKEGKRLTNGININLHLLKEMFAKITTEESELLKMVVRTTKKSQEVKQ 367
Query: 391 SFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLK 450
++ +S D + + G+ RYY++ F + F + EY+ GL WV +
Sbjct: 368 Y-----DAGLYFDSADTIMIHTQGYHTRYYDTHFGKANNTENFYKQIVGEYIEGLFWVFQ 422
Query: 451 YYYQGCRSWKWYFPFHYAPFASD 473
YY G SW+W++P HYAPFA D
Sbjct: 423 YYTVGVPSWRWFYPEHYAPFAED 445
>gi|221485905|gb|EEE24175.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2042
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 268/570 (47%), Gaps = 137/570 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RWLS +YP + +++ +P EFDNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLIN--------EKITQTSLP-----------EFDNLYLDMNGILH 41
Query: 61 PCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+H ED M V +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKETAE--------KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
RA+K+ AE ++ ++ R ++K A G HFDSNCI+PGT FMA+
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKF 161
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
L ++ +LN D WK +KV+LS +VPGEGEHKIM +IR ++ P N +HCL
Sbjct: 162 FRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLY 221
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIML LA+HEP+F ++REE G P+ +
Sbjct: 222 GLDADLIMLSLASHEPHFCLLREEV--------------------VFGKAVSRGPQDRML 261
Query: 292 FGSEVEFIFVRLSVLREYLEKELAM----------------------------------- 316
E + +S+LREYL E A
Sbjct: 262 TKRE-NLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADALDTKAAA 320
Query: 317 ----PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK-- 370
P+L +P ER +DD+V CF VGNDFLPH + +I +G +D L++ YK+ + +
Sbjct: 321 IALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKEYLQRYA 380
Query: 371 -TQEQLRQEEN---GGGGG---------------------------------RGVKRSFD 393
EQ E G G + +R+
Sbjct: 381 VLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWAADSQWMKSKRRNKS 440
Query: 394 DVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGH---EYVLGLCWVLK 450
+V+E E ++++ L +++ +Y K + R + +Y+ GL WVL
Sbjct: 441 EVEE--ERRPASEDALL---AYRESFYLKKMGMDASTPEGRKQIDRLAVDYLEGLQWVLY 495
Query: 451 YYYQGCR--SWKWYFPFHYAPFASDFINIA 478
YYY+G + W W++P HYAPF +D ++ +
Sbjct: 496 YYYRGPQYSGWTWFYPHHYAPFMTDVLSCS 525
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++ ++P+DF++D+ G +W GV LLPF+DE LH+ P + KL+ EE +
Sbjct: 583 LLPYFPDDFEVDMEGCTVSWGGVTLLPFIDEMLLHREALPLFSKLTGEEQQ 633
>gi|237835011|ref|XP_002366803.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|211964467|gb|EEA99662.1| 5'-3' exonuclease, putative [Toxoplasma gondii ME49]
gi|221503733|gb|EEE29417.1| 5'->3' exoribonuclease, putative [Toxoplasma gondii VEG]
Length = 2042
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 184/570 (32%), Positives = 268/570 (47%), Gaps = 137/570 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RWLS +YP + +++ +P EFDNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLIN--------EKITQTSLP-----------EFDNLYLDMNGILH 41
Query: 61 PCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+H ED M V +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHTSEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKETAE--------KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
RA+K+ AE ++ ++ R ++K A G HFDSNCI+PGT FMA+
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKAAAKQEKNLSAPTPGGHFDSNCISPGTEFMAKF 161
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
L ++ +LN D WK +KV+LS +VPGEGEHKIM +IR ++ P N +HCL
Sbjct: 162 FRHLRFFCEKKLNEDARWKDLKVVLSGPDVPGEGEHKIMQFIRCAKSDPHTGRNVRHCLY 221
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIML LA+HEP+F ++REE G P+ +
Sbjct: 222 GLDADLIMLSLASHEPHFCLLREEV--------------------VFGKAVSRGPQDRML 261
Query: 292 FGSEVEFIFVRLSVLREYLEKELAM----------------------------------- 316
E + +S+LREYL E A
Sbjct: 262 TKRE-NLQLLHISLLREYLFLEFAAAALRSTPPKESDEHPKRSETASTSEADALDTKAAA 320
Query: 317 ----PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK-- 370
P+L +P ER +DD+V CF VGNDFLPH + +I +G +D L++ YK+ + +
Sbjct: 321 IALCPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMSCYKEYLQRYA 380
Query: 371 -TQEQLRQEEN---GGGGG---------------------------------RGVKRSFD 393
EQ E G G + +R+
Sbjct: 381 VLAEQAPSREGPWLSTGCGQINFCNFFLFLSLFVDTVETDLLQEWAADSQWMKSKRRNKS 440
Query: 394 DVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGH---EYVLGLCWVLK 450
+V+E E ++++ L +++ +Y K + R + +Y+ GL WVL
Sbjct: 441 EVEE--ERRPASEDALL---AYRESFYLKKMGMDASTPEGRKQIDRLAVDYLEGLQWVLY 495
Query: 451 YYYQGCR--SWKWYFPFHYAPFASDFINIA 478
YYY+G + W W++P HYAPF +D ++ +
Sbjct: 496 YYYRGPQYSGWTWFYPHHYAPFMTDVLSCS 525
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++ ++P+DF++D+ G +W GV LLPF+DE LH+ P + KL+ EE +
Sbjct: 583 LLPYFPDDFEVDMEGCTVSWGGVTLLPFIDEILLHREALPLFSKLTGEEQQ 633
>gi|149239226|ref|XP_001525489.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450982|gb|EDK45238.1| 5'-3' exoribonuclease 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1512
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 198/325 (60%), Gaps = 46/325 (14%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH D + +D+M AIF ID LF I++P++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDGSLSRLSDDQMYAAIFNYIDHLFSIIKPKQTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR + E E + +K + +G +P E FDSN ITPGT FMA+L+
Sbjct: 61 QRARRFRTAYEAEENL-------KKAIENGEDIPKEDP----FDSNSITPGTEFMAKLTD 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH ++ D W +++ILS VPGEGEHKIM+YIR RAQP++DPN +HC+ G
Sbjct: 110 NLKYFIHKKITEDSRWANVEIILSGHEVPGEGEHKIMEYIRAVRAQPEYDPNLRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKP---NQARPCDVCGQMGHEMKECVGLDAEPNPES 288
DADLIMLGL +H+P+F ++REE F P N + P DV Q
Sbjct: 170 DADLIMLGLVSHDPHFALLREEVTFGPRRGNSSGPKDVTEQ------------------- 210
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
+F + LSVLREYLE E + F + FER LDD++ + + +GNDFLPH
Sbjct: 211 --------KFYLLHLSVLREYLELEFKEIEEQISFEFDFERILDDFILIMYVIGNDFLPH 262
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKT 371
LP L + +GA L++ +K+T+ ++
Sbjct: 263 LPDLHLNKGAFPLLLSTFKQTLLQS 287
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESND 406
LPS E R+ +R +N ++TV + Q + + V+ S E+ +
Sbjct: 431 LPSFETRDDFEER-INELRRTVKQYQ------------------AANLVESESYLNETKE 471
Query: 407 EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+ +K+ YY+ K DD L + YV GL WVL YYY+GC SW +Y+ +H
Sbjct: 472 VYQTKFKNWKNDYYKEKLHFSIDDKEDLLKITEHYVEGLQWVLYYYYRGCPSWNFYYRYH 531
Query: 467 YAPFASDF 474
YAP SD
Sbjct: 532 YAPRISDI 539
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPII FYP + +D+NGK W+ V LL FVDE++L AL P EKL+ EE
Sbjct: 590 EKSPIIQFYPHEVDVDMNGKTATWEAVVLLDFVDEKKLIAALKPIEEKLTPEE 642
>gi|367000872|ref|XP_003685171.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
gi|357523469|emb|CCE62737.1| hypothetical protein TPHA_0D00960 [Tetrapisispora phaffii CBS 4417]
Length = 1313
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/374 (40%), Positives = 213/374 (56%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P ++ Q+V K P FD LYLDMN I H
Sbjct: 1 MGIPKFFRYISERWPMIL--------QQVEPDKTP-----------GFDYLYLDMNSIFH 41
Query: 61 PCTHPEDKP---APKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
TH D DE++ + IF ID +F +++P ++YMAIDGVAPRAKMNQQRS
Sbjct: 42 MATHSNDVSDDVGKGTTDEVIYSRIFTYIDHIFLMIKPTTIIYMAIDGVAPRAKMNQQRS 101
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R + + + I + + D + P FD N ITPGT FMA+L+ L
Sbjct: 102 RRIRTAMDAEKAIDAMKNAIGEENWDSSMEP--------FDKNSITPGTEFMAQLTINLK 153
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+IH++ ND W+ ++VI S VPGEGEHKIMDYIRK ++Q D+DPN++HC+ G+DAD
Sbjct: 154 YFIHEKKTNDSNWRDVQVIFSGHEVPGEGEHKIMDYIRKLKSQRDYDPNSRHCIYGSDAD 213
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LI+LGL+TH P+ ++REE G + GL+A+
Sbjct: 214 LIILGLSTHIPHLAVLREEM------------IFGRKKDIRAGLEAQ------------- 248
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F+ + +S+LREYLE E L F Y FER +DD+V + F +GNDFLP+LP L + +
Sbjct: 249 NFLLLHMSILREYLELEFEDLKTKLSFKYDFERIIDDFVLILFVIGNDFLPNLPDLHLNK 308
Query: 355 GAVDRLVNLYKKTV 368
GA ++ +KK +
Sbjct: 309 GAFPVILETFKKAL 322
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 392 FDDVDESSEEEESNDEVRLWEDGFKD---RYYESKFDVPKDDIAFRLM-VGHEYVLGLCW 447
++D+ + + +SN + ED FK YY+SK + + L + YV GL W
Sbjct: 470 YEDLIKDQNKTKSNVQDIYNEDKFKSWKQNYYKSKLEFSETSYGEDLRNLTANYVEGLQW 529
Query: 448 VLKYYYQGCRSWKWYFPFHYAPFASDF 474
VL YYY+ C SW WY+ +HYAP SD
Sbjct: 530 VLDYYYKECPSWSWYYKYHYAPRISDL 556
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAPQ----DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA +++ IP F P SPIIDFYP K D NGK W+ V L+ FVD
Sbjct: 576 QQLMAVLPSRSSKLIPSI-FRPLMLDPSSPIIDFYPTTVKFDKNGKAADWEAVVLISFVD 634
Query: 698 EERLHKALAPYYEKLSVEES 717
++RL A+ P+ L+ EE+
Sbjct: 635 QDRLINAMKPFLNLLTPEEA 654
>gi|195457130|ref|XP_002075439.1| GK17975 [Drosophila willistoni]
gi|194171524|gb|EDW86425.1| GK17975 [Drosophila willistoni]
Length = 1638
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 217/390 (55%), Gaps = 68/390 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HCIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +ED++ IF +++LF +++P+KL ++++DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDANIHFHLEEDQIFQDIFNYVEKLFHLIKPQKLFFLSVDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR ++E AE++ A R EK + FDSNCITPGT FM RL L +
Sbjct: 102 FRTARE-AEQLETKASQRG-----------EKRQHERFDSNCITPGTVFMERLQLALRSF 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ +++ DP W+ +VILS PGEGEHKIMDYIR ++QP+ DPNT+HCL G DADLI
Sbjct: 150 LRTKISLDPLWQKCRVILSGEETPGEGEHKIMDYIRYLKSQPNFDPNTRHCLYGLDADLI 209
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
+LGL THE +F ++REE K G +K E F
Sbjct: 210 ILGLCTHELHFVVLREEVK------------FGRNVKRAT--------------LEETRF 243
Query: 299 IFVRLSVLREYLEKEL-AMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ L +LREYLE E + + +DDWV M F VGNDF+P+LP L I A+
Sbjct: 244 YLLHLGLLREYLELEFNELSTKEKKLDVAQLIDDWVLMGFMVGNDFIPNLPCLHISSNAL 303
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
L YKT Q+ + G RG
Sbjct: 304 PLL--------YKTYIQVYPQLGGNINERG 325
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 392 FDDVDESSEEEESNDEVRLWED--GFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWV 448
+D DE E+ +++ L + +K YY +KF K D+ L H Y+ L W+
Sbjct: 408 YDSDDEEHFEDLTDEASSLRHEFQNYKRNYYRNKFKREMKGDLVEELT--HHYITALQWI 465
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
L YYY+G +SW WY+PFHYAPF SD NI V +F+ G
Sbjct: 466 LDYYYRGVQSWDWYYPFHYAPFISDLKNIENVKIHFQLG 504
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DS + +FYP +F+ DLNGKK W+ V L+PF+DE RL +A+ P L+ E
Sbjct: 537 DSALAEFYPTEFESDLNGKKHDWEAVVLIPFIDERRLLEAMRPCENCLTTAE 588
>gi|320169726|gb|EFW46625.1| Dhm2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 1615
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/345 (44%), Positives = 203/345 (58%), Gaps = 55/345 (15%)
Query: 55 MNGIIHPCTHPED-KPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH C+HP D P+ + ED++ IF ID LF I+RP++ +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCSHPNDVDPSFRITEDKIFAEIFAYIDHLFNIIRPQRTFFMAVDGVAPRAKMN 60
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRFR++KE K+AE R + + PE E FDSNCITPGT FM++LS
Sbjct: 61 QQRARRFRSAKENESKLAEARRSGKPI--------PETEP---FDSNCITPGTAFMSKLS 109
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y+I ++ D W+ ++VILS +PGEGEHKIM+Y+R Q++ P +DPNT+HCL G
Sbjct: 110 VQLKYFISRKITTDRAWRNVEVILSGHEIPGEGEHKIMEYVRTQKSLPGYDPNTRHCLYG 169
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADL++LGLA+HEP F ++REE K G+ G + K+ G DA
Sbjct: 170 LDADLMILGLASHEPQFCLLREEVKFG-------GGKKGPQSKKTGGADA---------- 212
Query: 293 GSEVEFIFVRLSVLREYLEKEL----------------------AMPNLPFPYSFERALD 330
+ F + LS+LREYLE E P P ++ E +D
Sbjct: 213 ---ITFFLLHLSLLREYLEVEFRPAFDMAQAEYKAALAALPAGTPAPPAPLVFNLESVID 269
Query: 331 DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQL 375
DWV M + +GNDF+PHLP L I GA + L +Y + V K Q L
Sbjct: 270 DWVLMGYLIGNDFIPHLPHLHIDTGAWEYLYKVYGEIVPKQQSYL 314
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+ID YP DF+ DLNGKK W+ V L+PF+DE+RL A+ P+ +L+ EE
Sbjct: 496 SPVIDLYPLDFESDLNGKKNEWEAVILIPFIDEKRLLAAMKPFDARLNAEE 546
Score = 42.4 bits (98), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 459 WKWYFPFHYAPFASDFINIAEVDTNFETG 487
W WY+PFHY+P+ASD + + FE G
Sbjct: 434 WGWYYPFHYSPYASDLRGFSHLHIEFELG 462
>gi|326498799|dbj|BAK02385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 895
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 249/520 (47%), Gaps = 125/520 (24%)
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 107
+DNLYLDMN IIH C + ++ + F+ +DRLFR+V+PR+LLY+A+DGVAP
Sbjct: 66 YDNLYLDMNEIIHKCFG-------RKNGQVYLRFFDHMDRLFRLVKPRRLLYLAVDGVAP 118
Query: 108 RAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPF 167
AK N+ R F+++K+ + AE + E G + P ++ D PGT F
Sbjct: 119 MAKTNKLRQGYFKSTKQGTDAEAEAVLLTEIFRVQGKEVLP-RDTYEFEDRTVKMPGTEF 177
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
M +S L ++I +RLN DP WK IKVILSDANVPGEGEHKIM +IR QR++ ++DPNT+
Sbjct: 178 METISVVLEWFIRERLNTDPEWKDIKVILSDANVPGEGEHKIMSFIRAQRSRENYDPNTR 237
Query: 228 HCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
HCL G DADLIML LA+HE + +I+R E PN P +
Sbjct: 238 HCLYGHDADLIMLALASHEVHISILR-EVNPNGRIPARL--------------------- 275
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+ FV + VLREYLE E+ P ER +DD++ +C +GNDF+P +
Sbjct: 276 ----------YQFVNIWVLREYLELEMKTPGC--KQDTERLIDDFICICCLMGNDFIPRI 323
Query: 348 PSLEIREGAVDRLVNLYK------------------------------------------ 365
PSLEI E AVD L+ YK
Sbjct: 324 PSLEIHEFAVDLLIETYKTAFNRMGGYIVNTNKIKDKHGVYLEVSRLEKFFHELSLCEEK 383
Query: 366 ----------KTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR-----L 410
K + K Q + E G + +SF +S + VR L
Sbjct: 384 ILLKRYELQEKLLCKIQREAAGNEESSDGSDLISKSFVTQRSTSTCSSNEYNVRKNTREL 443
Query: 411 W----------EDGFKDR--------------YYESKFDVPKDDIAFRLMVG--HEYVLG 444
W +D FK+R +Y KF + RL +Y+ G
Sbjct: 444 WRAVNDICCSKDDLFKNRACKQDHIGPGWKFRFYREKFGAQTSNEVGRLQTEMVQKYLEG 503
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
LCW+L+ Y+ SW W +PF+YAPFASDF + + + +F
Sbjct: 504 LCWMLQCYFSEVPSWTWCYPFYYAPFASDFNCLPQFNISF 543
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S I FYP +F+ID GK+F QGVA LPF+D + L A + L+ +E
Sbjct: 581 EESTIQMFYPSEFEIDTYGKRFLSQGVAKLPFIDNKLLLSATKMVEKDLTYDE 633
>gi|322703736|gb|EFY95340.1| exonuclease Kem1 [Metarhizium anisopliae ARSEF 23]
Length = 1404
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 199/323 (61%), Gaps = 42/323 (13%)
Query: 53 LDMNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 109
LDMNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRA
Sbjct: 19 LDMNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRA 78
Query: 110 KMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMA 169
KMNQQR+RRFR + + AEK REK + +G +P E+ FDSNCITPGT FMA
Sbjct: 79 KMNQQRARRFRTALD-AEKA------REKAIKEGVEMPKEEP----FDSNCITPGTEFMA 127
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+LS L Y+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP+++PN +HC
Sbjct: 128 KLSQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHC 187
Query: 230 LCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV 289
L G DADLIMLGL +H+P+F ++REE +A ++ H+
Sbjct: 188 LYGLDADLIMLGLLSHDPHFCLLREEVTFGRASKAK-SKELEHQ---------------- 230
Query: 290 ITFGSEVEFIFVRLSVLREYLEKEL----AMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
F + L ++REYLE E L F + ER +DD++ M FFVGNDFLP
Sbjct: 231 -------NFYLLHLCIVREYLEMEFQELHQEGTLSFSFDLERVIDDFILMAFFVGNDFLP 283
Query: 346 HLPSLEIREGAVDRLVNLYKKTV 368
+LP L I EGA+ + +YK +
Sbjct: 284 NLPGLHINEGALANMFKIYKAVL 306
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 388 VKRSFDD---VDESSEEEESNDEVRLWED---GFKDRYYESKFD--VPKDDIAFRLMVGH 439
V +S+D VD +SEE + E +L+ + G+K +YY KF P+ ++ +
Sbjct: 467 VIKSYDKALVVDVTSEEAQQQYE-KLYNEKYAGWKTKYYLQKFPEWAPEKYEKEQIDLCQ 525
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GL WVL YYY+G SW W++ +HYAP SD D +F+ G QP
Sbjct: 526 NYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLSFKKG-QP 575
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+AP + L +E
Sbjct: 606 NSPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMAPKNDLLEDDE 657
>gi|45187827|ref|NP_984050.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|44982611|gb|AAS51874.1| ADL046Cp [Ashbya gossypii ATCC 10895]
gi|374107264|gb|AEY96172.1| FADL046Cp [Ashbya gossypii FDAG1]
Length = 1474
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 216/372 (58%), Gaps = 60/372 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P++ Q ++G +I +FDNLYLDMN I+H
Sbjct: 1 MGIPKFFRYVSERWPNI--------SQLIDGTQIS-----------QFDNLYLDMNSILH 41
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
TH + K E+E+ IF ID LF ++P++ LYMAIDGVAPRAKMNQQR+RR
Sbjct: 42 TATHGNEDDIKKRLSEEEVFARIFVYIDHLFHTIKPQQTLYMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ + + R RE+ G +P +G FDSN ITPGT FM +L+ L Y+
Sbjct: 102 FRSAMDAE---TSLNRARER----GDEIP----EGEPFDSNSITPGTEFMHKLTTNLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH+++++D W+ +ILS VPGEGEHKIM YIR RAQ D++PNT+HC+ G DADLI
Sbjct: 151 IHEKVSSDSLWQNKNIILSGHEVPGEGEHKIMQYIRTLRAQQDYNPNTRHCIYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL+ H+ + ++REE +A+ Q F
Sbjct: 211 MLGLSIHDTHVALLREEILYGRAQKPKALEQQN--------------------------F 244
Query: 299 IFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ L+++REYLE E L F + FER LDD++ + F +GNDFLP+LP L + +GA
Sbjct: 245 YLLHLAIMREYLELEFQEISDELEFKFDFERLLDDFILVMFVIGNDFLPNLPDLHLNKGA 304
Query: 357 VDRLVNLYKKTV 368
L+ +K+T+
Sbjct: 305 FPVLLQTFKETL 316
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD YY+ K D + + Y+ GL WVL YYYQGC SW WY+ +HYAP SD
Sbjct: 510 WKDSYYKEKVGFSIHDEDKLKEMANNYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDI 569
Query: 475 INIAEVDTNF 484
+V+ +F
Sbjct: 570 RKGLDVNISF 579
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+D YP + ++D NGK W+ V L FVD++RL A+AP + L+ EE +
Sbjct: 616 SPILDLYPAEVELDKNGKTADWEAVVKLKFVDQDRLLAAMAPLDDLLTPEEKK 668
>gi|322696208|gb|EFY88004.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 1386
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 198/321 (61%), Gaps = 42/321 (13%)
Query: 55 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
MNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
NQQR+RRFR + + AEK REK + +G +P E+ FDSNCITPGT FMA+L
Sbjct: 61 NQQRARRFRTALD-AEKA------REKAIKEGVEMPKEEP----FDSNCITPGTEFMAKL 109
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
S L Y+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP+++PN +HCL
Sbjct: 110 SQQLRYFVNKKVSEDADWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNPNVRHCLY 169
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIMLGL +H+P+F ++REE +A ++ H+
Sbjct: 170 GLDADLIMLGLLSHDPHFCLLREEVTFGRASKTK-SKELEHQ------------------ 210
Query: 292 FGSEVEFIFVRLSVLREYLEKELAM----PNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+L
Sbjct: 211 -----NFYLLHLCIVREYLEMEFQELHQEGTLSFPFDLERVIDDFILMAFFVGNDFLPNL 265
Query: 348 PSLEIREGAVDRLVNLYKKTV 368
P L I EGA+ + +YK +
Sbjct: 266 PGLHINEGALANMFKIYKAVL 286
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 388 VKRSFDD---VDESSEEEESNDEVRLWED---GFKDRYYESKFDV--PKDDIAFRLMVGH 439
V +S+D VD +SEE + E +L+ + G+K +YY KF P+ ++ +
Sbjct: 447 VIKSYDKALVVDVTSEEAQQQYE-KLYNEKYAGWKTKYYLQKFPEWDPEKYEKEQIDLCQ 505
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GL WVL YYY+G SW W++ +HYAP SD D NF+ G QP
Sbjct: 506 NYVQGLQWVLFYYYKGIASWPWFYGYHYAPLISDVAKGLNADLNFKKG-QP 555
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 34/42 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+SPIIDFYP DF++D+NGKK W+ V +PF++E+RL A+A
Sbjct: 586 NSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIEEKRLLDAMA 627
>gi|401405148|ref|XP_003882024.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
gi|325116438|emb|CBZ51991.1| putative 5'-3' exonuclease [Neospora caninum Liverpool]
Length = 2070
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 189/560 (33%), Positives = 263/560 (46%), Gaps = 125/560 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RWLS +YP + +++ +P EFDNLYLDMNGI+H
Sbjct: 1 MGIGRFYRWLSERYPLIN--------EKITQASLP-----------EFDNLYLDMNGILH 41
Query: 61 PCTHPEDKPA-PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+H + ED M V +F +D + V P+K L +A DGVAPRAKMNQQR+RR+
Sbjct: 42 TCSHGNSGGMLHESEDAMWVDVFAALDLIISTVNPKKFLVLAADGVAPRAKMNQQRARRY 101
Query: 120 RASKETAE--KIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
RA+K+ AE + E R+ + P G HFDSNCI+PGT FMA+ L +
Sbjct: 102 RAAKDAAELARQKEEHRLLKMQRKQDKSAPQSPPSGGHFDSNCISPGTEFMAKFFRHLRF 161
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+ +LN D WK +KV+LS +VPGEGEHKIM +IR ++ P N +HCL G DADL
Sbjct: 162 FCEKKLNEDARWKHLKVVLSGPDVPGEGEHKIMQFIRCSKSDPHSGRNVRHCLYGLDADL 221
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
IML LA+HEP+F ++REE G P+ + E
Sbjct: 222 IMLSLASHEPHFCLLREEV--------------------VFGKAVTKGPQDRLLTKRE-N 260
Query: 298 FIFVRLSVLREYL--------------------EKELAM--------------------- 316
+ +S+LREYL EKE
Sbjct: 261 LQLLHISLLREYLFLEFAAVALRAAPALKSSSNEKEQPSRADGAAPAEIVFDASLGSPSL 320
Query: 317 -PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQL 375
P+L +P ER +DD+V CF VGNDFLPH + +I +G +D L+ YK+ +
Sbjct: 321 RPSLLYPRERERIIDDYVLFCFMVGNDFLPHPKATDIADGGLDLLMTCYKEYLQGYAVLA 380
Query: 376 RQEENGGG----GGRG----------VKRSFDDVDESSEEEESNDE--VRLWEDGFKDRY 419
Q + G G G + D V+ +E + D ++ ++ +
Sbjct: 381 EQAPSPAGPWLSTGCGQIDFCNFFLFLSLFVDTVETDLLQEWAADSQWIQSKRRNAREAH 440
Query: 420 YESKFDVPKDDI-----AFRL----MVGH-------------EYVLGLCWVLKYYYQGCR 457
ESK D + AF L M GH +Y+ GL WVL YY++G
Sbjct: 441 AESKPPPSGDALLAYRQAFYLKKMGMDGHTPEGRKQIDRLAVDYLEGLQWVLYYYFRGPH 500
Query: 458 --SWKWYFPFHYAPFASDFI 475
W W++P HYAPF +D +
Sbjct: 501 YSGWDWFYPHHYAPFMTDVL 520
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 671 FYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
++P DF++D+ G W GV LLPF++E+ L+K P + KL+ EE+
Sbjct: 584 YFPTDFEVDMEGCTVPWGGVTLLPFIEEKLLYKEALPLFSKLTGEEA 630
>gi|296817211|ref|XP_002848942.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
gi|238839395|gb|EEQ29057.1| exonuclease II Exo2 [Arthroderma otae CBS 113480]
Length = 1412
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 224/380 (58%), Gaps = 85/380 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE-DKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D PA + ED+M +AIF I+ LF ++P++L +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDSPAFRMTEDKMFIAIFNYIEHLFGKIKPKRLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + AE+A+ EK + +G +P E FDSNCITPGT FM +L+ L Y+
Sbjct: 102 FRTALD-----AELAK--EKAIREGVEMPKE----DAFDSNCITPGTEFMTKLTKQLRYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC----LCGAD 234
I+ +++ D W+G++V+LS VPGEGEHKIM+YIR+ +AQP++DPN +HC LC +
Sbjct: 151 INKKVSEDAEWQGVEVVLSGHEVPGEGEHKIMEYIRQAKAQPEYDPNMRHCFTISLCSRE 210
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
+D+ T EP EE K ++ H+
Sbjct: 211 SDVW-----TAEP------EEIK-----------ELEHQ--------------------- 227
Query: 295 EVEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + L ++REYLE +EL + L FP+ ER +DD++ M FFVGNDFLP+LP+L
Sbjct: 228 --NFYLLHLCIVREYLELEFQELKLDGALQFPFDMERVIDDFILMAFFVGNDFLPNLPNL 285
Query: 351 EIREGAVDRLVNLYKKTVYK 370
I EGA+ + +YK+ + K
Sbjct: 286 HINEGALAWMFKVYKEVLPK 305
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP DF++D+NGKK W+ V +PF+DEERL KA+A L+ +E
Sbjct: 599 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEERLLKAMATKEHLLTPDE 650
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ E+ + +E F KD+YY+ KF ++ + YV GL WVL Y
Sbjct: 471 VQETTAEDAQLTAEKKYEKKFQEWKDKYYKEKFGWGLENTEEMRKLTENYVQGLQWVLFY 530
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HYAP SD D F+ G QP
Sbjct: 531 YYRGVASWPWFYRYHYAPMISDIHLGLGADVEFKLG-QP 568
>gi|342878482|gb|EGU79819.1| hypothetical protein FOXB_09678 [Fusarium oxysporum Fo5176]
Length = 1380
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 202/334 (60%), Gaps = 44/334 (13%)
Query: 55 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
MNGIIH CTH ED E+EM + IF I+ LF ++P++L +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDVSFRLSEEEMFIRIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
NQQRSRRFR + + + REK + +G +P E+ FDSNCITPGT FMA+L
Sbjct: 61 NQQRSRRFRTA-------LDAEKAREKAIKEGVEIPKEEP----FDSNCITPGTEFMAKL 109
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
S L Y+++ +++ D W+G +++LS VPGEGEHKIM+YIR +AQP+++ N +HCL
Sbjct: 110 SQQLRYFVNKKVSEDTDWQGCEIVLSGHEVPGEGEHKIMEYIRNAKAQPNYNQNVRHCLY 169
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
G DADLIMLGL +H+P+F ++REE +A ++ H+
Sbjct: 170 GLDADLIMLGLLSHDPHFCLLREEVTFGRASKTK-SKELEHQ------------------ 210
Query: 292 FGSEVEFIFVRLSVLREYLEKELAMPN----LPFPYSFERALDDWVFMCFFVGNDFLPHL 347
F + L ++REYLE E L FP+ ER +DD++ M FFVGNDFLP+L
Sbjct: 211 -----NFYLLHLCIVREYLEMEFQELQEDGALSFPFDLERVIDDFILMAFFVGNDFLPNL 265
Query: 348 PSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
PSL I EGA+ ++ +YK + K + ENG
Sbjct: 266 PSLHINEGALAKMFRIYKSILPKCDGYMN--ENG 297
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 388 VKRSFDD---VDESSEEEESNDEVRLWED---GFKDRYYESKFD--VPKDDIAFRLMVGH 439
V +++D +D + E+ + + E +L++D G+K +YY KF+ P + +
Sbjct: 448 VMKTYDKALVIDLTPEDAQKHYE-KLYQDKYQGWKTKYYLQKFEEWAPDNYDKELTALCE 506
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YV GL WVL YYYQG SW W++ +HYAP SD + D NF+ G QP
Sbjct: 507 NYVQGLQWVLYYYYQGIASWPWFYGYHYAPLISDVVKGVGADLNFKKG-QP 556
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+AP E L +E
Sbjct: 587 DSPIIDFYPRDFELDMNGKKMDWEAVIKIPFIDEKRLLAAMAPKNELLEPDE 638
>gi|189209730|ref|XP_001941197.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977290|gb|EDU43916.1| 5'-3' exoribonuclease 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1391
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 207/340 (60%), Gaps = 61/340 (17%)
Query: 55 MNGIIHPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH CTH + A K ED+M ++IF I+ LF ++P++L +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHNDSDSVTARKSEDQMFISIFNYIEHLFGKIKPKQLFFMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRFR + +T + REK + +G +P E+ FDSNCITPGT FMA+L+
Sbjct: 61 QQRARRFRTALDTE-------KAREKAIREGVEMPTEEA----FDSNCITPGTAFMAKLT 109
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y+I+ +++ D W+G++V+LS VPGEGEHK+M+YIR+ +AQP +DPN +HCL G
Sbjct: 110 QQLKYFINKKVSEDIDWQGVEVVLSGHEVPGEGEHKVMEYIRQAKAQPGYDPNRRHCLYG 169
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIMLGL +H+P+F+++REE +TF
Sbjct: 170 LDADLIMLGLLSHDPHFSLLREE----------------------------------VTF 195
Query: 293 GSEVE----------FIFVRLSVLREYLEKELAMPNLP----FPYSFERALDDWVFMCFF 338
G + + F + L ++REYLE E P FP+ ER +DD++ M FF
Sbjct: 196 GRQSQTKSKELEHQNFYLMHLCIVREYLELEFQELEEPGALSFPFDMERVIDDFILMAFF 255
Query: 339 VGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
VGNDFLP+LP L I EGA+ + N+YK + K + + +E
Sbjct: 256 VGNDFLPNLPHLHINEGALALMFNVYKTVLPKGKGYINEE 295
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 395 VDESSEEEESNDEVRLWE--DGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY 452
VD S E+ +S + + E + +K+ YY+SKF+ + + + YV GL WVL YY
Sbjct: 454 VDVSPEDAQSEMQKKYDEKFEAWKNDYYKSKFEWDRSNEEELRKLTENYVQGLQWVLYYY 513
Query: 453 YQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
Y+G SW WY+ +HY+P SD + D NF+ G QP
Sbjct: 514 YRGVASWPWYYQYHYSPMISDVKRGLKADINFKLG-QP 550
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQF---APQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q M ++ S +P + +DSPIIDFYP DF +D+NGKK W+ V +PF+ E
Sbjct: 555 QQLMGVLPDRSKSIVPKAYWPLMTNEDSPIIDFYPRDFTLDMNGKKQDWEAVVKIPFIQE 614
Query: 699 ERLHKALAPYYEKLSVEE 716
+RL KA+A + L+ +E
Sbjct: 615 DRLLKAMATKEQDLTPDE 632
>gi|164424738|ref|XP_960925.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
gi|157070639|gb|EAA31689.2| hypothetical protein NCU06678 [Neurospora crassa OR74A]
Length = 1415
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/320 (45%), Positives = 199/320 (62%), Gaps = 40/320 (12%)
Query: 55 MNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH CTH + D E+EM +AIF I+ LF ++P+KL +MAIDGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRFR + + + R+K + +G LP E+ FDSNCITPGT FMA+LS
Sbjct: 61 QQRARRFRTALDNE-------KARDKAIREGKELPKEEP----FDSNCITPGTEFMAKLS 109
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y+IH +++ D W+ +++LS VPGEGEHKIM+YIR RAQ D+D N +HCL G
Sbjct: 110 QQLRYFIHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYG 169
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIMLGL +H+P+F ++REE V G + GL+
Sbjct: 170 LDADLIMLGLLSHDPHFCLLREE----------VTFGRGPSKHKAKGLE----------- 208
Query: 293 GSEVEFIFVRLSVLREYLE---KELAMPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
E F + L ++REYLE ++L P + FP+ E+ +DD++ M FFVGNDFLP+LP
Sbjct: 209 --EQNFYLMHLCIVREYLELEFQDLKKPGAMSFPFDMEKVIDDFILMAFFVGNDFLPNLP 266
Query: 349 SLEIREGAVDRLVNLYKKTV 368
L I EGA+ + +YK+ +
Sbjct: 267 RLHINEGALSLMFRIYKEIL 286
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 415 FKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
+KD+YY KF+ P++ + YV GL WVL YYY+G SW W++ +HYAP S
Sbjct: 470 WKDKYYAEKFEDWTPENKEDELRKLTENYVQGLQWVLYYYYRGIASWPWFYRYHYAPLIS 529
Query: 473 DFINIAEVDTNFETGTQP 490
D + + D NF+ G QP
Sbjct: 530 DVMKGLKADLNFKMG-QP 546
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLS-VEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+ P E LS VE+S
Sbjct: 577 NSPIIDFYPRDFELDMNGKKMDWEAVVKIPFIDEKRLLAAMGPKNELLSDVEKS 630
>gi|407040062|gb|EKE39962.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 666
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 175/511 (34%), Positives = 254/511 (49%), Gaps = 93/511 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ F W+ + P V+ PQ++ G+ + + N G E+DNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICPGY----VKRLPQKIQGE----EKREKNETGEEYDNLYIDFNGIIH 52
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H E + E+E+M IF+ +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEAASEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ FDSNCITPGT FM ++ LH YI
Sbjct: 113 SILNNT---------------------------GGFDSNCITPGTKFMEKIGIALHGYIV 145
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ND W G+KVILSD+ V GEGEHKI ++IRK+ + +HC+ G D DLI+L
Sbjct: 146 NRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIEKNKKFKEERHCIYGMDGDLIIL 205
Query: 241 GLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L + N TI+REE K N CD+CG+ H+ K+ G E +
Sbjct: 206 TLGINITNMTILREEQEIIKKNNK--CDICGK-KHKTKD---------------HGKETK 247
Query: 298 FIFVRLSVLREYLEKELAMPNL--------------PFPYSFERALDDWVFMCFFVGNDF 343
I + LR++L E A NL E + D++ + F VGNDF
Sbjct: 248 LIMCYPNELRKWLINE-AKKNLIETKKEEGEEYKEEDIQIIEEEIIKDFILISFLVGNDF 306
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEE------------NGGGGGRGVKRS 391
LP +PS++I+ G ++ L+ Y K K + + E G +K
Sbjct: 307 LPRIPSIKIQTGGMEMLLKNYWKLYVKGKRLSKGTEINIKNFKELFKMIGEEESNILKGI 366
Query: 392 FDDVDESSEEEE--------SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVL 443
+ + E +E S+ E++L ++G+ DRYY+ F+ +I F + H Y
Sbjct: 367 IQNTKKDKEVKEYDQNIYFDSSKEIKLNQEGYHDRYYQIHFNTT--NIEFIQNIVHHYFE 424
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
G+ WV YY SW+WY+ FHYAPFA DF
Sbjct: 425 GISWVFNYYLNTLPSWRWYYKFHYAPFALDF 455
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
SPI+ ++ FKID+NG+ ++GV LLP +D LH
Sbjct: 504 SPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLH 540
>gi|260949235|ref|XP_002618914.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
gi|238846486|gb|EEQ35950.1| hypothetical protein CLUG_00073 [Clavispora lusitaniae ATCC 42720]
Length = 1430
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/320 (45%), Positives = 197/320 (61%), Gaps = 44/320 (13%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH ++ + +D+M AIF ID LF I++P+++ YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSDNDTLTRMTDDQMYAAIFNYIDHLFDIIKPKEVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QRSRRFR + E E + K ++ G ++P E FDSN ITPGT FMA+L+
Sbjct: 61 QRSRRFRTAYEAEENL-------RKAISQGEVIPKEDP----FDSNAITPGTEFMAKLTN 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH ++ D W IKVILS VPGEGEHKIM +IR ++Q D++PN +HC+ G
Sbjct: 110 NLKYFIHKKITEDNRWANIKVILSGHEVPGEGEHKIMQFIRSMKSQDDYNPNLRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKP-NQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
DADLIMLGL TH+P+F+++REE F P ++ + D+ Q
Sbjct: 170 DADLIMLGLVTHDPHFSLLREEVVFGPSSRNKSGDIHEQ--------------------- 208
Query: 291 TFGSEVEFIFVRLSVLREY--LEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
F + LS+LREY LE + LPF YSFER LDD++ + + +GNDFLP+LP
Sbjct: 209 ------NFYLLHLSLLREYMGLEFQDLEGELPFEYSFERVLDDFILIMYVIGNDFLPNLP 262
Query: 349 SLEIREGAVDRLVNLYKKTV 368
L I +GA L+ +K+++
Sbjct: 263 DLHINKGAFPFLIGAFKESL 282
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Query: 608 MQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSP 667
+ D+ M ++ +K Q E F + K + + A+S K + + SP
Sbjct: 534 ISDVAMGVKDMLEKNQD-EIHFDLATPFKPFEQLMAVLPARSRKLMPDVYRSLMTDEHSP 592
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
IIDFYP + +IDLNGK +W+ V LL FVDE+RL +AL P KL+ E++
Sbjct: 593 IIDFYPHEVEIDLNGKTASWEAVVLLSFVDEKRLLEALKPIEAKLTPAETK 643
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYV 442
R +++ + + EE + L+++ F KD YY+ K D + Y+
Sbjct: 446 RKTIKNYQSSNLVATEETMKEAKDLYDEKFVRAKDEYYKKKLHFSIHDEEKMIEFTRHYL 505
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
GL WVL YYY+GC SW WYF +HYAP SD
Sbjct: 506 EGLQWVLYYYYKGCASWNWYFRYHYAPRISD 536
>gi|255072731|ref|XP_002500040.1| predicted protein [Micromonas sp. RCC299]
gi|226515302|gb|ACO61298.1| predicted protein [Micromonas sp. RCC299]
Length = 249
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGIIHPC HPED+PAP E+E+ IF+ IDRLF ++RPRKLLYMAIDGVAPRAKMNQQ
Sbjct: 1 MNGIIHPCFHPEDRPAPTTEEEVFECIFDYIDRLFAMIRPRKLLYMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA++E EK E ++REKL +G +PP ++K FDSN ITPGTPFM RLSA
Sbjct: 61 RSRRFRAAQEAKEKEEEDEKLREKLRREGVNVPP-RQKSEAFDSNVITPGTPFMGRLSAA 119
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YY+H R+N DP W+G+KVI+SDA+VPGEGEHK M YIR+QR DPNT+H + G D
Sbjct: 120 LQYYVHQRMNTDPAWRGVKVIMSDASVPGEGEHKAMHYIRQQRGLKGFDPNTKHVVYGLD 179
Query: 235 ADLIMLGLATHEPNFTIIRE-EFKPNQARP 263
ADLIML LATHEPNF I+RE F+ N P
Sbjct: 180 ADLIMLALATHEPNFWILREVVFQKNAPEP 209
>gi|291236957|ref|XP_002738405.1| PREDICTED: C. briggsae CBR-XRN-2 protein-like [Saccoglossus
kowalevskii]
Length = 1810
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 216/421 (51%), Gaps = 92/421 (21%)
Query: 69 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEK 128
P P +E+E + + ID L IVRP+K+LY+A+DGV P AK N +RSRRF + KE
Sbjct: 40 PLPINEEEKFEGMSKFIDMLMEIVRPKKMLYIAVDGVTPFAKNNSRRSRRFLSDKEERMS 99
Query: 129 IAEVARI-REKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDP 187
E+ I EK ++ E E F+ N I PGT FM+RL LH YI +++N P
Sbjct: 100 DTELDLIWHEKGFSESESSADELE----FNRNLICPGTKFMSRLHVHLHEYIANKINTQP 155
Query: 188 GWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEP 247
W GIKVILSDA VPGEGEHKIM+ +R+Q+A P HD N++HC+ D GLATHEP
Sbjct: 156 SWVGIKVILSDATVPGEGEHKIMEIVRRQKATPTHDINSRHCIYSND------GLATHEP 209
Query: 248 NFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLR 307
N +IIR+E +G K+ V F +L
Sbjct: 210 NLSIIRKEIP------------LGDWCKDKVPY-----------------FFITKLQC-- 238
Query: 308 EYLEKELAMPNL-PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
LEKE+ + L ++ R +DDWVF+C +GNDFLP LPSL I E A+DRL+ +YK
Sbjct: 239 --LEKEMYVAGLGSGVHNINRTIDDWVFLCCLLGNDFLPKLPSLNINEKALDRLIRMYKT 296
Query: 367 TVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV 426
V T L +EE DV
Sbjct: 297 AV--THTMLGKEE---------------------------------------------DV 309
Query: 427 PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFET 486
+ R+ + YV GLCW+ YYY GC SW+W++P+HYAPFA DFINI + +FE
Sbjct: 310 IFRERRRRIKWANSYVKGLCWISMYYYHGCPSWQWFYPYHYAPFAMDFINITNLQNDFEV 369
Query: 487 G 487
G
Sbjct: 370 G 370
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 217/467 (46%), Gaps = 138/467 (29%)
Query: 69 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEK 128
P P E+E + + ID L IVRP+K+L++A++GV P AK N +R ++F K+ E
Sbjct: 1048 PLPISEEEKFEGMSKFIDTLMEIVRPKKMLFIAMEGVTPFAKNNNRRQKKFLNYKKDREA 1107
Query: 129 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPG 188
A + E+ AD E G FD N + PGT FM+RL L YI DR+ P
Sbjct: 1108 EAGI----ERRSAD--------EFG--FDYNSLCPGTDFMSRLHVHLRAYIADRIRTQPR 1153
Query: 189 WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPN 248
W GIKVILSDA+VPGEGEHKIM+ IR QR
Sbjct: 1154 WVGIKVILSDASVPGEGEHKIMEIIRSQRGH----------------------------- 1184
Query: 249 FTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLRE 308
I+R+ C + +E V E + IFV L VLR
Sbjct: 1185 --IVRD------------CENAPRQEREVV---------------QEEKLIFVHLKVLR- 1214
Query: 309 YLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
+R +DDWVF+C +GNDFLP LPSL I+EGA+DRLV +YK V
Sbjct: 1215 -----------------KRTIDDWVFLCCLLGNDFLPKLPSLNIKEGALDRLVRMYKTAV 1257
Query: 369 YKT-----QEQLRQEENGGGGGR-------GVKRSFDD------------VDESSEEE-- 402
T + ++R+ G G KR D + E +EE
Sbjct: 1258 THTMINDLKSKIRELSLALDGKSEEIDPDDGDKRYLTDNGIVNLHMLQMILTELGKEEDV 1317
Query: 403 ---------------------ESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMVGHE 440
ES D VRL DG+KDRYYE KFDV P + F +
Sbjct: 1318 IFRERRQKNEMNSKYKCEIQHESEDNVRLGMDGWKDRYYEYKFDVSPSHEPEFINNLADS 1377
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
YV GLCW+ YY+ GC SW+W++P+HYAPFA DF NI + +FE G
Sbjct: 1378 YVKGLCWISMYYFHGCPSWQWFYPYHYAPFAMDFKNITHLQNDFEVG 1424
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
DSPI DFYP+DF+ DLNG+K+ +GVA +PFVDE RL +AL
Sbjct: 405 DSPISDFYPDDFETDLNGEKYTSRGVARIPFVDETRLKEAL 445
>gi|407849157|gb|EKG03993.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 383
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 211/376 (56%), Gaps = 59/376 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ F+ WL R Y CVED P+EV +GQ +P S FDN YLDM
Sbjct: 1 MGIAGFYLWLQRWYGD----CVEDVPEEVVKAALDGQPLPASSDTTQ----RFDNFYLDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P+ E+EM IF +D L++IVRPRK L + IDGVAP++KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPESEEEMFERIFAQVDLLYKIVRPRKCLVLCIDGVAPQSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA++E E A+ E+++ G LP + S +D N ITP TPFM R+
Sbjct: 113 RSRRFRAAEERIESEVFSAQCAEEVVKKGLPLPQTR---SRWDHNVITPSTPFMERVGLA 169
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
+ ++I ++N DP W+ I VI SDA+VPGEGEHKIM YIR+ RAQ ++P T H + G D
Sbjct: 170 IEWFIMKKINEDPAWRHIAVIFSDAHVPGEGEHKIMHYIRELRAQLGYNPQTSHVIHGMD 229
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + TI+R E F+P+ R C
Sbjct: 230 ADLICLGLSTHEEHVTILRNQLTETFQPDHNRFC-------------------------- 263
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+ L R L + FER LDD++F+CFFVGNDFLPH+P +
Sbjct: 264 ---------YFSLYKYRLRLRDDFGGIG---QMDFERVLDDFIFLCFFVGNDFLPHVPLI 311
Query: 351 EIREGAVDRLVNLYKK 366
I+ ++ L++ Y +
Sbjct: 312 SIKTKGIELLLDHYVR 327
>gi|429327281|gb|AFZ79041.1| 5'-3' exoribonuclease 2, putative [Babesia equi]
Length = 1356
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 270/556 (48%), Gaps = 113/556 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPN------------PNGMEF 48
MG+P+FFRWL+ +YP + + +V+ K+ + N P G F
Sbjct: 1 MGIPSFFRWLAERYPLICESQIGSASDKVDTFKLLRSTEANNETYDGLYNGFVAPEG--F 58
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 106
DNLYLD+NGIIH C+H + E+++ V+IF CI + IVRP KLLY+A+DGVA
Sbjct: 59 DNLYLDVNGIIHNCSHSDANLCQNIHSEEDIFVSIFHCITNIVNIVRPNKLLYLAVDGVA 118
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
P AK+NQQR RRFRAS E +I + I + +G P ++ FD ITPGTP
Sbjct: 119 PTAKINQQRERRFRASAEMENQILVMNSID---IQNGVEEKPNTDE-YKFDPLQITPGTP 174
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN- 225
FM RL+ L ++ + + WK ++V++S ++VPGEGEHKIM+YIR +A+ + N
Sbjct: 175 FMERLTLHLQFFAQKMIAENKSWKNLQVVVSGSDVPGEGEHKIMEYIRNDKARRHFEANN 234
Query: 226 ----------TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
T HC+ G DADLI+L L THEP ++RE + GQM + K
Sbjct: 235 SSEDVKECKYTSHCIYGLDADLIILSLITHEPFVCLLRERV---------MFGQMKNSTK 285
Query: 276 ECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA-MPNLPFPYSF-ERALDDWV 333
+ ++ ++ + + +LREY+ +L P L +R +DD+V
Sbjct: 286 MRMMINMS-------------NYVLLHIGILREYILNDLIENPKLRKDVKIMDRVVDDFV 332
Query: 334 FMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV------------------------- 368
+ FVGNDFLPHL I EG +D ++ +YK +
Sbjct: 333 LITLFVGNDFLPHLLLANIPEGGLDAVLGIYKGYITESIKSKPLDSIWLTCDCGEINFDN 392
Query: 369 ----------YKT---QEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN---------D 406
Y+T Q +L E G+ K + V+ ++ + E++ D
Sbjct: 393 FLSFITRWAKYETNCIQNKLLAEP-AKKNGKVEKSTITVVNNANLKIETDLTEMNTRFPD 451
Query: 407 EVRLWEDGFKDRYYESKFDVPK---DDIAFR----LMVGHEYVLGLCWVLKYYYQGCRSW 459
E + + +K RYY +K + D F+ L+ G Y +G+ W+L YYY+ SW
Sbjct: 452 EPKTVNE-WKSRYYFAKLGISDQIGDGTLFKSVSTLVSG--YFVGIQWILYYYYRSVPSW 508
Query: 460 KWYFPFHYAPFASDFI 475
W F Y PF D +
Sbjct: 509 SWSLSFKYPPFVHDML 524
>gi|340508935|gb|EGR34531.1| hypothetical protein IMG5_008400 [Ichthyophthirius multifiliis]
Length = 263
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 140/273 (51%), Positives = 175/273 (64%), Gaps = 15/273 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL + P I+ E+ F NP E NLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCSRNPQFILDAFENYEN--------FSEPSNNP---EIHNLYLDMNGIIH 49
Query: 61 PCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC + P P +M IF ID+L I RP+++LYMAIDGVAPRAKMNQQR+RR
Sbjct: 50 PCCRSDGSAMPIPNTIQDMFNNIFMYIDKLMDICRPQRILYMAIDGVAPRAKMNQQRARR 109
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEK--GSHFDSNCITPGTPFMARLSACLH 176
F+ +KE E + I + G +P E + S FD+N ITPGT FM LS L
Sbjct: 110 FKGAKEAVELQKKKLEIINEQRQQGEDIPEEVMRFVESKFDTNVITPGTQFMRDLSIALQ 169
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
+Y+ DR+NN P WK +KV+ SDA++PGEGEHKI+++IR QR+Q +DPN++HCL GADAD
Sbjct: 170 HYVLDRVNNHPLWKNLKVVFSDASIPGEGEHKILNFIRIQRSQDQYDPNSKHCLYGADAD 229
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQ 269
L+MLGL+THEP F IIRE+ N + C VCGQ
Sbjct: 230 LLMLGLSTHEPYFYIIREQIISNDEKRCSVCGQ 262
>gi|401828471|ref|XP_003887949.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
gi|392998957|gb|AFM98968.1| 5'-3' exonuclease [Encephalitozoon hellem ATCC 50504]
Length = 656
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 178/543 (32%), Positives = 259/543 (47%), Gaps = 107/543 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL + I + +E NP+ D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHREAIHNILE------------------NPS---VDCLYLDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P + E ++ + + ID + VRPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIEKDLYKTVGDFIDYILLKVRPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEK---------------------------- 152
++ E A I+ L D + PP++ K
Sbjct: 100 SALGKKEGSA----IKPTLQTDFAVQPPKEGKDEGEDGEFTGESSLYDKFTAEDISESSS 155
Query: 153 ------GSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGE 206
FD NCITPGTPFM RL + L YI +L++DPG +++I S VPGEGE
Sbjct: 156 LAVDVEAEKFDLNCITPGTPFMERLHSVLISYIQYKLSSDPGASHLRIIYSSYLVPGEGE 215
Query: 207 HKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQA---RP 263
KIM +IR Q + +D H + D DL+ LGL+ H I+R+ F PN+A +
Sbjct: 216 QKIMSFIRNQESAARND---VHMIYSPDGDLMFLGLSLHRSKVLIMRDYFSPNRAQKKKV 272
Query: 264 CDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPY 323
C CG+ GH +EC V T F++V +S LR L +E +
Sbjct: 273 CTKCGRTGHSNEEC----------GVFT---NYHFVYVNISELRTRLIREFRRYTAQ-RF 318
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGG 383
S ER L+DW+F+CF +GNDF+P +P L+IR +++ + + K +T+ +
Sbjct: 319 SEERILNDWIFLCFLLGNDFVPSIPCLDIRFHSIETITEIMMKNFSETKSYI---TCNSA 375
Query: 384 GGRGVKRSFDDVDESSEE--------------EESND-------EVRLWEDGFKDRYYES 422
V ++F + S E+ EE D ++ + K +YY S
Sbjct: 376 IDYQVLKNFYTILASKEDSLYYRKSQSLDRFREELKDMPNITYEKIPIHTKTGKIQYYAS 435
Query: 423 KFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF--INIAEV 480
K + + R V +EYV GL WV YY G W WY+P+H+AP A+D ++I+E+
Sbjct: 436 KLNASTES-EIR-SVCYEYVKGLYWVYSYYILGSTGWDWYYPYHFAPLAADLSKLSISEI 493
Query: 481 DTN 483
N
Sbjct: 494 RIN 496
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DFYPED K D+ K F WQ V +LPFVD + A + L E+
Sbjct: 532 DFYPEDVKTDMFDKVFLWQEVVILPFVDFRSILSENASKFNSLEYED 578
>gi|389582934|dbj|GAB65670.1| exoribonuclease [Plasmodium cynomolgi strain B]
Length = 1327
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/422 (38%), Positives = 227/422 (53%), Gaps = 79/422 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV------------NGQK------IP------- 35
MGVP F+RWL +YP + E + +V NG+K +P
Sbjct: 1 MGVPTFYRWLVTRYPKIAKATYETRDSDVYARRTKIRDGHHNGEKKKDTYRVPDLSDYVN 60
Query: 36 ---FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIV 92
+ N NG +DNLYLDMNGIIH C+H ++ K +E+ + IF I+RLF I+
Sbjct: 61 NTDENHCSDNINGY-YDNLYLDMNGIIHLCSHSDNSRRAKSNEEIFLNIFLYIERLFDII 119
Query: 93 RPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEK 152
P+KLLYMAIDGVAP+AKMNQQRSRRF++ + + +REK L++ +P E+
Sbjct: 120 EPKKLLYMAIDGVAPKAKMNQQRSRRFKSILCSEIERNAYIELREKFLSENRTVP---EE 176
Query: 153 GSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDY 212
+ +DSN ITPGT FM LS L Y++ ++ ND WK I VI SDAN
Sbjct: 177 LTFWDSNIITPGTQFMYELSVALKYFVEHKITNDEKWKNIVVIFSDAN------------ 224
Query: 213 IRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE------------------ 254
R+QP +DPNT+H + G DADLIML LA+HEP F I+RE
Sbjct: 225 ----RSQPGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIIILDSKGEEKVQNKDFV 280
Query: 255 -EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESV-------ITFGSEVEFIFVRLSVL 306
K Q P +C + K+ +P+ ++ I + E + L++L
Sbjct: 281 GVLKSKQDLP--LCTTHIRKTKKMYTKYNDPHYANINRSHNCMINSENWNELQILDLTIL 338
Query: 307 REYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
REYL K+ + Y+ ER +DD++F+CF GNDFLPHLPS+ I G++D+LV LY+K
Sbjct: 339 REYLSKDFFFDST---YNLERCIDDFIFICFLCGNDFLPHLPSISIAAGSIDQLVLLYQK 395
Query: 367 TV 368
+
Sbjct: 396 VL 397
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 395 VDESSEEEESNDEVRLWEDG----FKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWV 448
+ +++E E ++V L D + +YY+SKF + + D F V ++Y+ GL WV
Sbjct: 674 IKKANECENPKEDVELGGDENPELIRIKYYKSKFHLDESDHVDDFVKEVVYKYIEGLSWV 733
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFI 475
L YY+Q C W WY+P++YAP +SD I
Sbjct: 734 LLYYFQSCPMWHWYYPYYYAPLSSDLI 760
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP+ FK + NGKK+ +Q V LLPFVD+ER+ K + L+ EE
Sbjct: 804 DSPIIDFYPKTFKEEENGKKYKYQWVILLPFVDKERIIKHARELNDTLTEEE 855
>gi|412993039|emb|CCO16572.1| 5'-3' exoribonuclease [Bathycoccus prasinos]
Length = 1513
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/333 (45%), Positives = 199/333 (59%), Gaps = 35/333 (10%)
Query: 55 MNGIIHPCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
MNG+IH C+H D E+EMM +F +D ++R+VRP+KLLYMAIDGVAPRAKMN
Sbjct: 1 MNGVIHNCSHGAGTDTNTRMTEEEMMAKVFAYLDHIYRMVRPKKLLYMAIDGVAPRAKMN 60
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQRSRRFR++KE E AE E PE + G FDSNCITPGT FMARL+
Sbjct: 61 QQRSRRFRSAKEAEEAKAEALAKGE----------PEAQ-GEPFDSNCITPGTEFMARLT 109
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L +Y+ + D W+ +KVILS V GEGEHKIM+YIR +R +PD+D N HCL G
Sbjct: 110 EHLKFYVRKKQTEDVAWRNVKVILSGHEVRGEGEHKIMEYIRWERLKPDYDANMSHCLYG 169
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIML L THEP+F ++RE K G+ G +E ++
Sbjct: 170 LDADLIMLALVTHEPHFCLLREVVKFG-------GGERGQPSRE------------ILER 210
Query: 293 GSEVEFIFVRLSVLREYLEKELAMP---NLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
S+ F+ +++ +LREYL+ E F Y ER +DD VF+C VGNDFLP LP+
Sbjct: 211 PSDDGFLMLQVGLLREYLDLEFQRSVKGACGFAYDVERVIDDIVFLCMLVGNDFLPPLPT 270
Query: 350 LEIREGAVDRLVNLYKKTVYKTQEQLRQEENGG 382
L+I EGA++ L + Y+ + + +E GG
Sbjct: 271 LDIAEGALNTLFDTYRDMLPSLGGYISGDEGGG 303
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+ SP+ F+P++ KID GK+ +W+GV LLPF+DE+ L A+A
Sbjct: 510 ESSPLKPFFPDEIKIDFEGKRNSWEGVVLLPFLDEKVLKDAIA 552
>gi|68467259|ref|XP_722291.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
gi|46444252|gb|EAL03528.1| hypothetical protein CaO19.12434 [Candida albicans SC5314]
Length = 1469
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 199/333 (59%), Gaps = 46/333 (13%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH D + +D+M AIF I+ LF+I++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR + E AE+ +K + +G +P E FDSN ITPGT FMA L+
Sbjct: 61 QRARRFRTAYE-----AEINL--KKAIENGEEIPKE----DPFDSNSITPGTEFMANLTN 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH ++ D W I++ILS VPGEGEHKIM+YIR R+Q D++PN +HC+ G
Sbjct: 110 NLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPN-QARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
DADLIMLGL TH+P+F ++REE F P + P D+ Q
Sbjct: 170 DADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDLHDQ--------------------- 208
Query: 291 TFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+F + LS+LREYL E L F Y F+R LDD++ + + +GNDFLP+LP
Sbjct: 209 ------KFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFILIMYVIGNDFLPNLP 262
Query: 349 SLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
L I +GA L+ +K+T+ ++ + ENG
Sbjct: 263 DLFINKGAFPLLIAAFKQTLLESDGYIN--ENG 293
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 608 MQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSP 667
+ D+ + +E+ ++T+ F++ + K + + A+S K + + + SP
Sbjct: 537 ISDISLGLEELI--NEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSP 594
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
II+FYP + ID+NGK +W+ V LL FVDE++L +AL P KL+ EE +
Sbjct: 595 IINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQ 645
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESK--FDVPKDDIAFRLM-VGH 439
R + + + EE N+ ++ + F K+ YY+ K F + ++ L+ +
Sbjct: 446 RKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKLHFSIDTEEGKGDLIEMTK 505
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
Y+ GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 506 HYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDI 540
>gi|320169903|gb|EFW46802.1| 5'-3' exoribonuclease 2 [Capsaspora owczarzaki ATCC 30864]
Length = 1548
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 155/406 (38%), Positives = 211/406 (51%), Gaps = 81/406 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV R L +YP ++ + P+ + FDNLYLD NGI H
Sbjct: 1 MGVIRLTRALVERYPLIL------------------RTIGPSNDAPLFDNLYLDFNGIAH 42
Query: 61 PCTHPED--KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
+H +D A E EMM A+F IDRL + RP+KL+Y+AIDGVAPRAKMNQQR RR
Sbjct: 43 NASHGKDDAGAAAISELEMMSAMFAAIDRLVEVARPQKLVYIAIDGVAPRAKMNQQRQRR 102
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKE-----KGSHFDSNCITPGTPFMARLSA 173
+ ++ AE AR + D P +E + FD+NCITPGT FM R+ A
Sbjct: 103 LKTARA-----AEKARTEASAIGDLTGAKPIEEIEAEARALPFDANCITPGTEFMDRMEA 157
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L YYI ++ P W ++VILS PGEGEHKI+D+IR Q++QP ++PNT+HC+ G
Sbjct: 158 YLSYYIKRKITESPQWSSLQVILSGHRTPGEGEHKIVDWIRAQKSQPGYNPNTRHCMYGL 217
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIML LA HEP+F I+RE+ F+ +A DA S +
Sbjct: 218 DADLIMLSLAMHEPHFAILREKVLFRSKKA--------------SVNAADA----RSEVA 259
Query: 292 FGSEVEFIFVRLSVLREYLEKEL---------------------------AMPNLP---- 320
F + E + + +LREYL+ E A P L
Sbjct: 260 FQATDELQLLYIGLLREYLDMEFGLSAGFKRSDGLRHGPLEKLMEQQQKAATPALTSQSV 319
Query: 321 FPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
++ ER +DD++F+CF +GNDFLPH+P +I G +D Y++
Sbjct: 320 SAWNLERTIDDFIFLCFIIGNDFLPHMPGFDIDSGGLDFAFEAYRQ 365
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 412 EDGFKDRYYESKFD-VPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPF 470
E +K YY + FD V + + R ++ H Y+ GL WVL YY QG SW WYFP+H+APF
Sbjct: 684 EASYKSSYYATYFDDVVSNTPSLRKLIKH-YLEGLVWVLHYYTQGLASWSWYFPYHFAPF 742
Query: 471 ASDFINIAEV 480
ASD +N+ E+
Sbjct: 743 ASDMVNLGEL 752
>gi|449703901|gb|EMD44256.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 670
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 254/511 (49%), Gaps = 93/511 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ F W+ + P V+ P ++ G+ + + N G E+DNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICPGY----VKRLPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIH 52
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H E + E+E+M IF+ +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ FDSNCITPGT FM ++ LH YI
Sbjct: 113 SVLNNT---------------------------GGFDSNCITPGTKFMEKIGIALHGYIV 145
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ND W G+KVILSD+ V GEGEHKI ++IRK+ + + +HC+ G D DLI+L
Sbjct: 146 NRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIIL 205
Query: 241 GLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L + N TI+REE K N CD+CG+ H+ K+ G E +
Sbjct: 206 TLGINIRNMTILREEQEIIKKNNK--CDICGK-KHKTKD---------------HGKETK 247
Query: 298 FIFVRLSVLREYLEKELAMPNL--------------PFPYSFERALDDWVFMCFFVGNDF 343
I + LR++L E A NL E + D++ + F VGNDF
Sbjct: 248 LIMCYPNELRKWLINE-AKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDF 306
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEE------------NGGGGGRGVKRS 391
LP +PS++I+ G ++ L+ Y K K + + E G +K
Sbjct: 307 LPRIPSIKIQTGGMEMLLKNYWKLYVKGKRLSKGTEINITNFKELFKMIGEEESNILKGI 366
Query: 392 FDDVDESSEEEE--------SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVL 443
+ + E +E S+ E++L ++G+ DRYY+ F+ +I F + H Y
Sbjct: 367 IQNTKKDKEVKEYDQNIYFDSSKEIKLNKEGYHDRYYQIHFNT--TNIEFIQNIVHHYFE 424
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
G+ W+ YY SW+WY+ FHYAPFA DF
Sbjct: 425 GISWIFNYYLNTLPSWRWYYKFHYAPFALDF 455
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
SPI+ ++ FKID+NG+ ++GV LLP +D LH
Sbjct: 504 SPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLH 540
>gi|67480967|ref|XP_655833.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56472997|gb|EAL50447.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
Length = 666
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/511 (33%), Positives = 254/511 (49%), Gaps = 93/511 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ F W+ + P V+ P ++ G+ + + N G E+DNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVRQICPGY----VKRLPPKIQGE----EKREKNEIGEEYDNLYIDFNGIIH 52
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H E + E+E+M IF+ +DR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEATSEEEIMERIFKAMDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRYC 112
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ FDSNCITPGT FM ++ LH YI
Sbjct: 113 SVLNNT---------------------------GGFDSNCITPGTKFMEKIGIALHGYIV 145
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ND W G+KVILSD+ V GEGEHKI ++IRK+ + + +HC+ G D DLI+L
Sbjct: 146 NRMDNDLYWSGLKVILSDSKVAGEGEHKIYEFIRKEIKKNERFKEERHCIYGMDGDLIIL 205
Query: 241 GLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L + N TI+REE K N CD+CG+ H+ K+ G E +
Sbjct: 206 TLGINIRNMTILREEQEIIKKNNK--CDICGK-KHKTKD---------------HGKETK 247
Query: 298 FIFVRLSVLREYLEKELAMPNL--------------PFPYSFERALDDWVFMCFFVGNDF 343
I + LR++L E A NL E + D++ + F VGNDF
Sbjct: 248 LIMCYPNELRKWLINE-AKKNLIETKKEEGEEYKEEDIEIIEEEIIKDFILISFLVGNDF 306
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEE------------NGGGGGRGVKRS 391
LP +PS++I+ G ++ L+ Y K K + + E G +K
Sbjct: 307 LPRIPSIKIQTGGMEMLLKNYWKLYVKGKRLSKGTEINITNFKELFKMIGEEESNILKGI 366
Query: 392 FDDVDESSEEEE--------SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVL 443
+ + E +E S+ E++L ++G+ DRYY+ F+ +I F + H Y
Sbjct: 367 IQNTKKDKEVKEYDQNIYFDSSKEIKLNKEGYHDRYYQIHFNT--TNIEFIQNIVHHYFE 424
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
G+ W+ YY SW+WY+ FHYAPFA DF
Sbjct: 425 GISWIFNYYLNTLPSWRWYYKFHYAPFALDF 455
Score = 39.3 bits (90), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
SPI+ ++ FKID+NG+ ++GV LLP +D LH
Sbjct: 504 SPILHYFNTSFKIDINGENKLYKGVPLLPDIDINLLH 540
>gi|218185281|gb|EEC67708.1| hypothetical protein OsI_35184 [Oryza sativa Indica Group]
Length = 944
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 140/266 (52%), Positives = 175/266 (65%), Gaps = 22/266 (8%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME----FDNLYLDMN 56
MGVP+F+RWL KYP+++ N SS NG + NLYLDMN
Sbjct: 1 MGVPSFYRWLVGKYPAIV--------SPANDDDDDVGSSS---NGAAAPPVYHNLYLDMN 49
Query: 57 GIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
GIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+DGVAPRAKM
Sbjct: 50 GIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKM 109
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGC-ILPPEKEKGSHF-DSNCITPGTPFMA 169
NQQR+RRF+++ + E +R++ A+G +LP E S D N ITPGT FM
Sbjct: 110 NQQRARRFKSAMPAKQAEVEENILRDRFRAEGKKVLPQETSSSSEVSDPNVITPGTEFMD 169
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+LS L YYI LNNDP WK I VILSDANVPGEGEHKIM +IR QR + +DPNT+HC
Sbjct: 170 KLSDALKYYIRAHLNNDPLWKDINVILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHC 229
Query: 230 LCGADADLIMLGLATHEPNFTIIREE 255
L G DADLIML LA+HE +F+I+REE
Sbjct: 230 LYGLDADLIMLALASHEVHFSILREE 255
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
+D+++L G+K R+++ KFD KD+IA + + +Y+ GLCWVL YY+ SW WY
Sbjct: 517 HDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVQKYLEGLCWVLCYYFADVPSWSWY 576
Query: 463 FPFHYAPFASDFINIA 478
+PF+YAPFASD ++
Sbjct: 577 YPFYYAPFASDVRGLS 592
Score = 46.2 bits (108), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I FYP + ID +GK++ WQG+A LPF++++ L + L+V E
Sbjct: 609 ESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHE 660
>gi|241950323|ref|XP_002417884.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
gi|223641222|emb|CAX45602.1| 5'-3' exoribonuclease, DNA strand transfer protein beta, putative
[Candida dubliniensis CD36]
Length = 1487
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/320 (44%), Positives = 194/320 (60%), Gaps = 44/320 (13%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH D + +D+M AIF I+ LF+I++P+K YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDNTITRLSDDQMYAAIFNYIEHLFQIIKPQKTFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR + E AE+ +K + +G +P E FDSN ITPGT FMA+L+
Sbjct: 61 QRARRFRTAYE-----AEINL--KKAIENGEEIPKE----DPFDSNSITPGTEFMAKLTN 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH ++ D W I+++LS VPGEGEHKIM+YIR R+Q D++PN +HC+ G
Sbjct: 110 NLKYFIHKKITEDSSWANIEIVLSGHEVPGEGEHKIMEYIRSIRSQDDYNPNLRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPN-QARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
DADLIMLGL TH+P+F ++REE F P + P D+ Q
Sbjct: 170 DADLIMLGLVTHDPHFALLREEVTFGPQRKIGPKDLHDQ--------------------- 208
Query: 291 TFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+F + LS+LREYL E L F Y F++ LDD++ + + +GNDFLP+LP
Sbjct: 209 ------KFYLLHLSLLREYLSLEFQEIENQLNFEYDFDKILDDFILIMYVIGNDFLPNLP 262
Query: 349 SLEIREGAVDRLVNLYKKTV 368
L I +GA L+ +K+T+
Sbjct: 263 DLFINKGAFPLLIAAFKQTL 282
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESK--FDVPKDDIAFRLM-VGH 439
R + + + EE N+ +++ + F K+ YY+SK F + ++ +L+ +
Sbjct: 446 RKTIKQYQSANLIENEEVLNETKQVYSEKFQSWKNDYYQSKLHFSIDTEEGKNKLIELTK 505
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
Y+ GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 506 HYIEGLQWVLYYYYRGCPSWNWYYKYHYAPRISDI 540
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 608 MQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSP 667
+ D+ + +E+ ++ E F++ + K + + A+S K + + SP
Sbjct: 537 ISDISLGLEELI--NEKIELNFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMTDEKSP 594
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
II+FYP + +ID+NGK +W+ V LL FVDE++L +AL P KL+ EE +
Sbjct: 595 IINFYPHEVEIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTFEEKQ 645
>gi|443920066|gb|ELU40060.1| exonuclease Kem1, putative [Rhizoctonia solani AG-1 IA]
Length = 1536
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/316 (45%), Positives = 190/316 (60%), Gaps = 46/316 (14%)
Query: 63 THPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+HP D ED++ AIF +D LF ++PRKL +MAIDGVAPRAKMNQQR+RRFR
Sbjct: 372 SHPNDGDVHFRLSEDQIFTAIFSYVDHLFGKIKPRKLFFMAIDGVAPRAKMNQQRARRFR 431
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG-----TPFMARLSACL 175
+K+ E REK G LP EK FDSNCITPG T FM +LS L
Sbjct: 432 TAKDAKEA-------REKAEKKGEKLPEEKA----FDSNCITPGMHPLGTVFMKKLSEQL 480
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+++ +++ D W+ ++V+LS VPGEGEHKIM+YIR +AQPD+DPN +HCL G DA
Sbjct: 481 KYFVNKKISEDANWREVQVVLSGHEVPGEGEHKIMEYIRLSKAQPDYDPNVRHCLYGLDA 540
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVG-LDAEPNPESVITFGS 294
DLIMLGL +H+P+F ++REE K G + + G L+ +
Sbjct: 541 DLIMLGLLSHDPHFCLLREEVK------------FGPQKNKSKGSLETQ----------- 577
Query: 295 EVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F + +S+LREYL+ E LPF Y ER +DD+V + F+GNDFLPHLP L I
Sbjct: 578 --SFYLLHISLLREYLDLEFQSLTSTLPFQYDLERIIDDFVLIAVFIGNDFLPHLPDLHI 635
Query: 353 REGAVDRLVNLYKKTV 368
E A++RL +YK +
Sbjct: 636 HENALERLFEIYKAVL 651
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
+E +D ++ +K+ YY+ K + + +V + Y+ GL WV+ YYY+G SW
Sbjct: 816 DEREDDRLKAALKKWKEDYYKEKLEFKDIEKGVDQLV-YRYIEGLQWVMYYYYRGVASWG 874
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
W++ +HYAP SD NI + N+E G
Sbjct: 875 WFYDYHYAPRISDIKNIELFEFNYELG 901
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+ SPI+DFYPE+F +D+NGKK W+ V +PF+D++RL ++A +L+ EE
Sbjct: 933 EHSPILDFYPENFDLDMNGKKQEWEAVVKVPFIDQKRLLSSMATLEHRLTEEE 985
>gi|156085645|ref|XP_001610232.1| 5'-3' exoribonuclease (XRN2) [Babesia bovis T2Bo]
gi|154797484|gb|EDO06664.1| 5'-3' exoribonuclease (XRN2), putative [Babesia bovis]
Length = 1388
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 180/562 (32%), Positives = 274/562 (48%), Gaps = 120/562 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVH---CVEDKP------QEVNGQKIPFDSSKPNPNGMEFDNL 51
MGVP FF+WL+++YP + V +K + + +++S P+G FDNL
Sbjct: 1 MGVPGFFKWLAQRYPLICETYRGSVAEKDDAFRLLKSIERSDDQYETSSV-PDG--FDNL 57
Query: 52 YLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRA 109
YLD+NGIIH C+H E + E+++ V IF+ I+ L +IVRPRKLLY+AIDGVAPRA
Sbjct: 58 YLDVNGIIHNCSHSIEELSQGLRCEEDIFVLIFQYINNLVKIVRPRKLLYLAIDGVAPRA 117
Query: 110 KMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS---HFDSNCITPGTP 166
K+ QQR RRFR+++++ + I+E +G P G FD ITPGTP
Sbjct: 118 KIMQQRDRRFRSARDSNKNEVVFQTIQEN---NGIEKEPSDGDGDVNFKFDPIQITPGTP 174
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN- 225
FM RLS L ++ H ++ + WK +K+++S ++VPGEGEHKIM+YIR ++ HD
Sbjct: 175 FMERLSVRLRFFAHMMIHENKAWKNLKIVVSGSDVPGEGEHKIMEYIRNDKSN-RHDAAR 233
Query: 226 -------TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECV 278
HC+ G DADLIML LATHEP ++RE+
Sbjct: 234 AGGTPQYISHCIYGLDADLIMLSLATHEPYVCLLREQV---------------------Y 272
Query: 279 GLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAM-PNLPF-PYSFERALDDWVFMC 336
+ + N ++ ++IF+ + +LREY+ ++ + P L P + +R +DD+V M
Sbjct: 273 FFNKQTNSRMMMNMN---DYIFLHIGILREYILHDMVISPELRRQPRTIDRVVDDFVLMS 329
Query: 337 FFVGNDFLPHLPSLEIREGAVDRLVNLY-------------------------------- 364
F+GNDFLPH +I +G ++ + LY
Sbjct: 330 MFMGNDFLPHGKFAKITDGGLNTYITLYSRYLEERYRSSPNGHIWLVTGCGEINCTNLLH 389
Query: 365 ------KKTVYKTQEQLRQEENGGGG-----GRGVKRSFDDVDESSEEEESN-DEVRLWE 412
K+ + ++L + G G G+ K +D ++ ++ E R
Sbjct: 390 FLNMLVKRESSRITDELHCGPDAGRGEAKRNGKSGKTEITVIDVANCCIMTDPSEFRAKY 449
Query: 413 DG-------FKDRYYESKFDVPKDDIAFRLM--------------VGHEYVLGLCWVLKY 451
+G ++ RYY +K + D I + V +Y+ G+ WV+ Y
Sbjct: 450 EGKPKSFAEWRSRYYMAKMGIASDVIVHKSTKSSDTESSPCTIPEVVRDYLEGIQWVMYY 509
Query: 452 YYQGCRSWKWYFPFHYAPFASD 473
YY+G SW WY YAP SD
Sbjct: 510 YYRGVPSWNWYLRCKYAPLLSD 531
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 642 QMKMAAQSTKAPSFIP---GGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFV 696
Q M A F+P G +SP+ +YPE F ID++ W GV LLP V
Sbjct: 578 QQLMMVMPPAAAHFLPTVFGNLMTDTESPLRKYYPEHFDIDMDDTNVQWGGVTLLPIV 635
>gi|167377811|ref|XP_001734553.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903890|gb|EDR29281.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 662
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/524 (33%), Positives = 259/524 (49%), Gaps = 113/524 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ F W+ + P V+ P+E+ G+ D + N G E+DNLY+D NGIIH
Sbjct: 1 MGVPSLFAWVKQICPKY----VKRLPKEIQGK----DKREKNETGEEYDNLYIDFNGIIH 52
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+H E + K E+E+M IF+ IDR VRPRK++++ +DGV P AK+ QQR RR+
Sbjct: 53 QCSHSEKEEEAKSEEEIMERIFKEIDRYVNYVRPRKMIFIGVDGVCPVAKIIQQRKRRY- 111
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
C + FDSN ITPGT FM ++ LH YI
Sbjct: 112 -----------------------CSII---NNNGGFDSNSITPGTKFMEKIGIALHGYIV 145
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R++ND W G++VILSD+ V GEGEHKI ++IRK+ + +HC+ G D DLI+L
Sbjct: 146 NRMDNDIYWSGLRVILSDSKVAGEGEHKIYEFIRKEIEKNCKFKEERHCIYGMDGDLIIL 205
Query: 241 GLATHEPNFTIIREE---FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L + N TI+REE K N CD+CG+ H+ K+ G E +
Sbjct: 206 TLGINITNMTILREEQEIIKKNIK--CDICGK-KHKTKD---------------HGKETK 247
Query: 298 FIFVRLSVLREYLEKELAMPNL--------------------PFPYSFERALDDWVFMCF 337
I + LR++L E A NL E ++D++ + F
Sbjct: 248 LIMCYPNELRKWLINE-AKKNLIETKKEEKEKKGEEYKEEEEEINIIEEEIINDFILISF 306
Query: 338 FVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDE 397
VGNDFLP +PS++I+ ++ L+ Y K +Y ++L + G ++F ++ +
Sbjct: 307 LVGNDFLPRIPSIKIQTRGMEILLKNYWK-LYVKGKRLSK------GTEINIKNFKELFK 359
Query: 398 SSEEEESN---------------------------DEVRLWEDGFKDRYYESKFDVPKDD 430
EEESN E++L ++G+ DRYY+ F+ +
Sbjct: 360 MIGEEESNILKEIIQNTKKDKEVKVYDQNIYFDSSKEIKLNQEGYHDRYYQIHFNTT--N 417
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
I F + H Y G+ WV YY SW+WY+ FHYAPFA DF
Sbjct: 418 IEFIQNIVHHYFEGISWVFNYYLNKLPSWRWYYKFHYAPFALDF 461
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 653 PSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLH 702
PS + +P +SPI+ ++ FKID+NG+ ++G+ LLP +D + LH
Sbjct: 498 PSKLAHFVLSP-NSPILHYFNTSFKIDINGENKLYKGIPLLPNIDIDLLH 546
>gi|429964640|gb|ELA46638.1| hypothetical protein VCUG_01864 [Vavraia culicis 'floridensis']
Length = 707
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 257/571 (45%), Gaps = 139/571 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL++KYP VI + P +V LY+D N IIH
Sbjct: 32 MGVPSLFRWLTKKYPQVIEKATPNNPTDV---------------------LYIDFNAIIH 70
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P D P P +EDEMM + + ID + PRK++ ++ DGVAPRAK+NQQRSRR+R
Sbjct: 71 ISCAPSDGPTPVNEDEMMQNVEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRSRRYR 130
Query: 121 A-----------------------SKETAEKIAEVARIREKLLADGCIL----------- 146
+ +KE +K+A+ + I+++ D L
Sbjct: 131 SIIEALELSKKSFESTKSVNFVEKTKEKIQKLAKASTIKDEYKVDFVGLMDNSTSDEKNS 190
Query: 147 --------------------PPEKEKGSH------------------FDSNCITPGTPFM 168
P + E G + FD N ITPGT FM
Sbjct: 191 GADEANGRRKERKCNEENAEPEDVEIGEYDKHASDLLEESSLTEDEAFDKNAITPGTRFM 250
Query: 169 ARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
L + +I +RL NDP +K + I S+ GEGE KIM IRK + + N +H
Sbjct: 251 YDLEKRMDQFIRNRLVNDPKYKNLCFIYSNGRRAGEGEQKIMTLIRKMKNR-----NLKH 305
Query: 229 CLCGADADLIMLGLATHEPNFTIIREEFK---PNQARPCDVCGQMGHEMKECVGLDAEPN 285
+ DADLI LG + H N I+RE+ + + C+ CG+ GH C L
Sbjct: 306 TIYSPDADLIFLGTSLHGRNVKIMREDLEFVHLQRQHYCEKCGKKGHLSTYCNKL----- 360
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
+ IF L VL+ L +EL+M + Y F R +DDW+ M F GNDFLP
Sbjct: 361 --------ALFSCIFFDLIVLKRILSEELSML-VHTSYEFNRMVDDWILMSFLAGNDFLP 411
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN 405
L ++R A++ L L + +T++ + + G V R+F + E+
Sbjct: 412 TLQCFDVRFEAIEILTKLLAENFNQTKKYITYK---GEIDFSVLRNFFKILSQHEDSLYV 468
Query: 406 DEVRLWED--------GF-----------KDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
+ +L D GF K RYY++K + + + V EY+LGL
Sbjct: 469 KKKKLLADTRRRFQIKGFFENIPLETTYGKTRYYDTKLSLKSEREV--ITVCREYILGLS 526
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
WV KYY +G +W+W++P+ YAPFA D N+
Sbjct: 527 WVFKYYVKGATNWEWFYPYDYAPFACDIANV 557
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 667 PIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
PI + +P + KID+ K WQGVA+LP +D E L
Sbjct: 594 PIFNSFPTEIKIDMFDKLLPWQGVAILPIIDIETL 628
>gi|320580141|gb|EFW94364.1| 5'-3' exoribonuclease, putative [Ogataea parapolymorpha DL-1]
Length = 1369
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 187/297 (62%), Gaps = 36/297 (12%)
Query: 74 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVA 133
+D+M AIF ID LF I++P+K+ YMAIDGVAPRAKMNQQR+RRFR++ E + +
Sbjct: 3 DDQMFGAIFAYIDHLFNIIKPQKVFYMAIDGVAPRAKMNQQRARRFRSAIEAEQNL---- 58
Query: 134 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIK 193
EK + +G +P E FDSN ITPGT FMA+L+ L +YI+ + ++D W+ ++
Sbjct: 59 ---EKAIKEGKEIPKE----PPFDSNAITPGTEFMAKLTQNLKFYINQKASSDSRWQNMR 111
Query: 194 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR 253
+ILS VPGEGEHKIMD+IR Q+AQPD+DPNT+HC+ G DADLIMLGL HEP+F ++R
Sbjct: 112 IILSGHEVPGEGEHKIMDFIRTQKAQPDYDPNTRHCVYGLDADLIMLGLVAHEPHFALLR 171
Query: 254 EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKE 313
EE G A + + +T + F + +S++REY+E E
Sbjct: 172 EEV--------------------TFGPKANSHSDDDLT---QQTFFLLHISLVREYMELE 208
Query: 314 LA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
L F Y FER +DD++ + + +GNDFLP+LP L + +GA L+ +K+ +
Sbjct: 209 FQELQDQLSFEYDFERIIDDFILIMYVIGNDFLPNLPDLHLNKGAFPLLIETFKEAI 265
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 642 QMKMAAQSTKAPSFIPGGQ---FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE 698
Q MA ++ IP +SPIIDFYP+D ++D+NGKK W+ V LL FVDE
Sbjct: 542 QQLMAVLPARSKELIPTVYRPLMTDSNSPIIDFYPDDCEVDMNGKKAPWEAVVLLSFVDE 601
Query: 699 ERLHKALAPYYEKLSVEESE 718
+RL +A+AP+ KLS EE +
Sbjct: 602 KRLIEAMAPFDSKLSPEEKQ 621
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 384 GGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHE 440
G R V + + +EE + L++ F K+ YY+ K +D +
Sbjct: 429 GIRRVIKKYQTAIVVEDEETLESQKDLYDARFVKWKNEYYKKKVGFSLNDEDKIRDMAEN 488
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
Y+ GL WVL YYY+G SW WY+ +HYAP SD V NFE G
Sbjct: 489 YIEGLQWVLNYYYKGISSWPWYYRYHYAPRISDVSKGLNVKINFEKG 535
>gi|32398787|emb|CAD98497.1| exonuclease ii, possible [Cryptosporidium parvum]
Length = 1572
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 224/401 (55%), Gaps = 89/401 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RW+S +YP + +E++ IP FDNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYPQI--------NEEISDGIIP-----------PFDNLYLDVNGIAH 41
Query: 61 PCTHPEDKPAP--------KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
+ + P K E+ AIF I++L I +PRKLLY+A+DGVAPRAKMN
Sbjct: 42 NSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQRSRRFR++++ + +K+ + I + + + FDSNCITPGT FM L
Sbjct: 102 QQRSRRFRSARD--------SEFLKKMEKNNSI---DTTQNNVFDSNCITPGTTFMHELR 150
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L ++I+ +++ DP WK ++V+LS A+VPGEGEHKIMD+IR ++Q D++ NT HCL G
Sbjct: 151 RQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYG 210
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIML LA+HEP+F+++REE K + +R N ES T
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIKFSSSR----------------------NYESR-TV 247
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLP-------FPYSF-------------------- 325
++ F F+ +S+LR+Y+ +L NL F Y F
Sbjct: 248 CTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDNVLIDG 307
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
ER +DD++ + F VGNDFLPH+P + +G + R+++ Y+K
Sbjct: 308 ERLIDDFIILGFIVGNDFLPHIPFHTVDQG-LARIISSYRK 347
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
Y+ GL WV YY++G SW+WY+P+ YAPFA D
Sbjct: 496 YLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACD 528
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
F +SP++ FYP +F++D+ G K W GV L+PF+DE L ++ K +S+
Sbjct: 610 FTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSITYVLSKCGFYDSD 667
>gi|66475504|ref|XP_627568.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
gi|46229016|gb|EAK89865.1| Kem1p-like 5'-3' exonuclease [Cryptosporidium parvum Iowa II]
Length = 1588
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 224/401 (55%), Gaps = 89/401 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RW+S +YP + +E++ IP FDNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYPQI--------NEEISDGIIP-----------PFDNLYLDVNGIAH 41
Query: 61 PCTHPEDKPAP--------KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
+ + P K E+ AIF I++L I +PRKLLY+A+DGVAPRAKMN
Sbjct: 42 NSVNSSEMRTPSNGINLSEKGSPEIWAAIFRYINKLVYIAKPRKLLYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQRSRRFR++++ + +K+ + I + + + FDSNCITPGT FM L
Sbjct: 102 QQRSRRFRSARD--------SEFLKKMEKNNSI---DTTQNNVFDSNCITPGTTFMHELR 150
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L ++I+ +++ DP WK ++V+LS A+VPGEGEHKIMD+IR ++Q D++ NT HCL G
Sbjct: 151 RQLEFFIYHQIHTDPLWKHLEVVLSGADVPGEGEHKIMDFIRCIKSQRDYNNNTTHCLYG 210
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIML LA+HEP+F+++REE K + +R N ES T
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIKFSSSR----------------------NYESR-TV 247
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLP-------FPYSF-------------------- 325
++ F F+ +S+LR+Y+ +L NL F Y F
Sbjct: 248 CTKERFQFLHISILRDYIINDLNPRNLSVEELNLCFGYKFGLKNDSQDQISIFDNVLIDG 307
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
ER +DD++ + F VGNDFLPH+P + +G + R+++ Y+K
Sbjct: 308 ERLIDDFIILGFIVGNDFLPHIPFHTVDQG-LARIISSYRK 347
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
Y+ GL WV YY++G SW+WY+P+ YAPFA D
Sbjct: 496 YLEGLQWVSYYYFRGVPSWRWYYPYRYAPFACD 528
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
F +SP++ FYP +F++D+ G K W GV L+PF+DE L ++ K +S+
Sbjct: 610 FTNPNSPLLSFYPANFEVDMEGVKVPWGGVTLIPFIDEFLLLDSITYVLSKCGFYDSD 667
>gi|154345762|ref|XP_001568818.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066160|emb|CAM43950.1| putative exoribonuclease 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 899
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 194/552 (35%), Positives = 281/552 (50%), Gaps = 87/552 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ FF WL R Y CV++ PQ+V GQ +P + + + +DN Y+DM
Sbjct: 1 MGIAGFFLWLQRWYGD----CVDNVPQDVVDAAFKGQALP----RSHASAYSYDNFYVDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P++E+EM +F+ +D L R+VRP+K L + IDGVAPR+KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCIDGVAPRSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+ E E A ++++++ + P +D N ITP T FM R++
Sbjct: 113 RSRRFRAADERLESDAISNACADRIVSEYSL--PRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +YI +LN D W+ + V+ SDA+VPGEGEHKIM YIR R+QP +D NT H + G D
Sbjct: 171 LEWYIMKKLNEDAEWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTTHVIHGMD 230
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHE--MKECVGLDAEPNPES 288
ADLI LGL+THE + I+R E F+P+ R C QM MK+ ++
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQPDHNRFCYFNLQMYRMKLMKDFANIEG------ 284
Query: 289 VITFGSEVE-FIFVRLSVLREYLEKELAMPNLPF----PYSFERALDDWVFMCFFVGNDF 343
+ F V+ FIF+ V ++L P++P E LD +V F + +
Sbjct: 285 -MQFERVVDDFIFLCFFVGNDFL------PHVPLVSIKTRGIELLLDHYVRD--FALHGY 335
Query: 344 LPHLPSLE-------IREGAVDRLVNLYKK--TVYKTQEQLRQ--EENGGGGGRGVKRSF 392
L HL ++ + A ++ L K+ + + +E+ +Q EE V
Sbjct: 336 LTHLGEVDYAHLHIFLMNFASKCMIKLTKEYYGIVRARERAKQHVEERITKTEAQVSEVL 395
Query: 393 DDV--DESSEEEESN-----------DEVRLWEDG-----------FKDRYYESKF--DV 426
+ D S+ +E S+ + RL D ++D YY+ KF D
Sbjct: 396 GTLLPDRSNAQEVSDVLLGLMSSVRKERTRLVVDKQPLGFSYLDKMYRDAYYQQKFGWDH 455
Query: 427 PKDDIAF----RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD---FINIAE 479
+ AF RL EY+ G+ WV++YY +GC SW+WYFP+HYAP D F
Sbjct: 456 SINRAAFENQIRLCCA-EYLRGMQWVMRYYTKGCPSWEWYFPYHYAPLLQDLAAFTATVN 514
Query: 480 VDTNFETGTQPV 491
V+ PV
Sbjct: 515 VEMRMSAPLHPV 526
>gi|396082120|gb|AFN83732.1| 5-3 exoribonuclease [Encephalitozoon romaleae SJ-2008]
Length = 656
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 250/537 (46%), Gaps = 95/537 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL + V +H + + P D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSH-KVAIHSILENPS--------------------VDCLYLDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P + + E ++ + + ID + RPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLESEEEIERDLHKTVGDFIDYILLKARPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 AS--KETAEKIAEVARIR--------------------EKLLADGCILPPEKEKGS---- 154
++ K+ + +++ E L D I+ E S
Sbjct: 100 SALGKKEGSSVKSISKTEFAPQSEKERKEEGRDEEFTGESSLYDKFIVEDISESSSLAVD 159
Query: 155 ----HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIM 210
+FD NCITPGTPFM RL L YI +L+NDPG +K+I S VPGEGE KIM
Sbjct: 160 VETENFDLNCITPGTPFMERLHNVLISYIQYKLSNDPGVSHLKIIYSSYLVPGEGEQKIM 219
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQAR---PCDVC 267
+IR Q + +D H + D DL+ LGL+ H I+R+ F PN+AR C C
Sbjct: 220 SFIRSQESVARND---VHMIYSPDGDLMFLGLSLHRSKVLIMRDYFSPNKARMKKTCAKC 276
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
+ GH +EC V T F++V +S LR L +E ++ ER
Sbjct: 277 KRSGHSDEEC----------GVFT---NYHFVYVNISELRIRLIREFRRYTTQ-RFNEER 322
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
L+DW+F+CF +GNDF+P P L+IR +++ + + K T+ +
Sbjct: 323 ILNDWIFLCFLLGNDFVPPTPCLDIRFHSIETITEIMAKNFSVTKSYITCSSTINFQALK 382
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKD------------------RYYESKFDV-PK 428
+ E + + + +G KD +YY SK + +
Sbjct: 383 NFCTILAAKEDGLYHRKSQSLDKFREGLKDVPNITYEKIPIHTKTGKIQYYASKLNANTE 442
Query: 429 DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF--INIAEVDTN 483
DI V +EY+ GL WV YY G W WY+P+H+AP A D I+I+E+ N
Sbjct: 443 SDIK---NVCYEYIKGLYWVYSYYILGSTGWDWYYPYHFAPLAVDLSKISISEIRIN 496
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
D YPED K D+ K + WQ V LLPFVD + A + L E+
Sbjct: 532 DCYPEDVKTDMFDKVYLWQEVVLLPFVDFRSILSENASRFNSLGYED 578
>gi|164655455|ref|XP_001728857.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
gi|159102743|gb|EDP41643.1| hypothetical protein MGL_4024 [Malassezia globosa CBS 7966]
Length = 1426
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 190/299 (63%), Gaps = 41/299 (13%)
Query: 74 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVA 133
E+++ + IF I+ LF +RPRK+ ++AIDGVAPRAKMNQQRSRRFR ++E E + +
Sbjct: 3 EEDIFLGIFAYIEHLFSKIRPRKVFFLAIDGVAPRAKMNQQRSRRFRTAQEAKENVEKAI 62
Query: 134 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIK 193
R E+L PP FDSNCITPGT FM +LS L Y++ +++ D W+G++
Sbjct: 63 RRGEELPES----PP-------FDSNCITPGTSFMRKLSQQLEYFVAKKVSEDSDWRGVE 111
Query: 194 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR 253
VILS GEGEHKIM++IR +AQP ++PNT+HCL G DADLIMLGL +H+P+F ++R
Sbjct: 112 VILSGHEACGEGEHKIMEFIRTIKAQPGYNPNTRHCLYGLDADLIMLGLLSHDPHFALLR 171
Query: 254 EE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLE 311
E+ F P +AR VG++++ F + +S+LREYLE
Sbjct: 172 EQVTFGPRRAR-------------RSVGVESQ-------------TFYLLHISLLREYLE 205
Query: 312 KELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
E A LPF + E+ +DD++ + FVGNDFLPHLP L+I +GA++ L +Y+K +
Sbjct: 206 LEFASLRDKLPFAFDLEKIIDDYILLHLFVGNDFLPHLPGLQINDGAIELLFRVYEKVL 264
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+E E+E +D ++ W K YY +K + +D + + Y+ G+ WVL YYY+
Sbjct: 469 AEEREREKEIDDALKEW----KADYYHTKMGIKYNDPDAIQDIVYNYIEGMQWVLYYYYE 524
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G SW W++ +HYAP SD NI++ F G
Sbjct: 525 GNASWGWFYRYHYAPQVSDLKNISDFTFQFNKG 557
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI+DFYP ++ D+NGKK +W+ V +PF+DEERL AL L+ EE +
Sbjct: 590 SSPILDFYPTKYESDMNGKKNSWEAVVKIPFIDEERLLHALQLREGGLTAEERQ 643
>gi|326437826|gb|EGD83396.1| single-stranded RNA 5'-3' exonuclease [Salpingoeca sp. ATCC 50818]
Length = 1780
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 219/416 (52%), Gaps = 92/416 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FR L +YP ++ E P E FDNLYLD NGI+H
Sbjct: 1 MGVPRLFRLLVERYPLILRGLDEPPPPE-------------------FDNLYLDFNGIVH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CTH + A + + EMM+AIF I++L ++PRK+L++AIDGVAPRAKM QQR RRF+
Sbjct: 42 TCTHGNELAATRSQQEMMMAIFSAIEQLVDAIKPRKVLFIAIDGVAPRAKMIQQRQRRFK 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A AR R++ D E G FDSNCITPGT FMA L L Y+I
Sbjct: 102 A-----------ARARKQFQQD------NPEHGDAFDSNCITPGTEFMATLEEYLIYFIQ 144
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++ D W+ ++V+LS VPGEGEHKIMD++R+ ++Q +DPNT+HC+ G DADLIML
Sbjct: 145 RKVEEDAAWRDLEVVLSGHRVPGEGEHKIMDFVRRLKSQESYDPNTRHCIHGLDADLIML 204
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
LATHEP+F I+RE+ + + G ++ + A F E
Sbjct: 205 ALATHEPHFCIVREKV---------LVRKRGRKIVNDLTSKA-------TVFQHTQELQL 248
Query: 301 VRLSVLREYLEKELAMPNLPFPY------------------------------------- 323
+ + +LREYL EL++ N+ +
Sbjct: 249 IHIGLLREYLHLELSLRNIGPDFRQGLVSSAAALRDAMVDAKFRQLPEEMQALRTSVVQS 308
Query: 324 -SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
+ ER +DD+VF+ F +GNDFLPHL ++ + +D + + Y++ + T+E L+ +
Sbjct: 309 RNVERLIDDFVFLTFLLGNDFLPHLVCADLDDDGLDAIFSAYREAI--TREDLKTQ 362
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 417 DRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
D YY KF+ + R+++ EY+ GL W L YYYQG SW W++P + AP +D +
Sbjct: 980 DDYYRVKFEDVEGHPVDRVVLVKEYLEGLLWTLNYYYQGVASWSWFYPHYAAPLPTDVLA 1039
Query: 477 IAEV--DTNFETGTQPV 491
+V F+ T P+
Sbjct: 1040 ACDVLPSIAFDAETTPL 1056
>gi|340506425|gb|EGR32559.1| hypothetical protein IMG5_077960 [Ichthyophthirius multifiliis]
Length = 1187
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 172/562 (30%), Positives = 269/562 (47%), Gaps = 147/562 (26%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQ-KIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVP F+ WLSR+YP ++ ++N + +P+ D YLDMNG+I
Sbjct: 1 MGVPGFYSWLSRRYPLIV--------NQLNSKLDVPY-----------IDCFYLDMNGLI 41
Query: 60 HPCTHPEDKP-----APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
+ CT ED K+ E+ IF ID + +V+P+K+LY+ +DG APRAK NQQ
Sbjct: 42 YKCTKEEDTVFKDLLLQKNMQEIFTLIFNYIDEMVNLVQPKKVLYLFLDGPAPRAKQNQQ 101
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
R+RRF ++K + + L G + + +N I+ GT FM L+
Sbjct: 102 RTRRFLSAKSHKD-------LNNSLKNCGIL-----AENQTMQNNAISTGTTFMHELNQQ 149
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
+ +YI ++ DP WK ++V S +NVPGEGEHKI++++ + + ++DP+T HC+ G D
Sbjct: 150 IQFYIKNKFKQDPQWKNLEVFFSGSNVPGEGEHKIINFMHQYCSSDNYDPSTTHCIYGVD 209
Query: 235 ADLIMLGLATHEPNFTIIREEFK--PNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
ADLIMLGL+TH +I+REE + PN ++ Q+
Sbjct: 210 ADLIMLGLSTHIKYVSILREEMRHIPNISKAAKREIQIN--------------------- 248
Query: 293 GSEVEFIFVRLSVLREYLEKELA-----MPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
+F + L+++REYL+ E M NL Y E +DD++ +CFF+GNDF+P L
Sbjct: 249 ----QFQIIYLNIVREYLDLEYKQLQGEMKNL--KYDIENIIDDFLLICFFIGNDFIPRL 302
Query: 348 PSLEIREGAVDRLVNLYKKTVYKTQEQLR------------------------------- 376
IREG + L+ +YK + + +E L
Sbjct: 303 YCFNIREGQFEILIQIYKNYIKEAKEYLNNMGYINWKGMYELIKQISNYEKEFIGDKADE 362
Query: 377 --QEENGGGGGRGVKRSF--DDVDESSEE--------------------------EESND 406
+E N G+ + +F DD+++ E +E N
Sbjct: 363 CTKEYNRQLKGQEGEDNFNVDDINKDKESNNNKQNENTFQQEYDNIIIDQQKNVFKEINK 422
Query: 407 EVRLWED----------GFKDR--YYESKFDVP-KDDIAFRLM--VGHEYVLGLCWVLKY 451
E + ED GF+ R YY+ K + + F+++ + +Y+ GL +VL Y
Sbjct: 423 EKKFLEDIQILYNTEADGFQARTYYYKEKLQLDFSNSQHFKVLDNLITKYIEGLQFVLLY 482
Query: 452 YYQGCRSWKWYFPFHYAPFASD 473
YY+G SW WY+PF+YAP ++D
Sbjct: 483 YYKGVPSWSWYYPFYYAPMSAD 504
>gi|341882472|gb|EGT38407.1| hypothetical protein CAEBREN_28761, partial [Caenorhabditis
brenneri]
Length = 274
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 190/317 (59%), Gaps = 48/317 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP + + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYPCL--------SEVINESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D E+E+ V IF I+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEEEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++ ++ +K + G ++P EK FDSNCITPGT FM RL L +
Sbjct: 102 FMSARTAQTQL-------DKAIEKGEVIPTEKR----FDSNCITPGTYFMTRLHDQLDEW 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I + +D W+G K+ILS NVPGEGEHKIMDYIR +RA+ D+DPNT+HC+ G DADLI
Sbjct: 151 IKKKSESDSHWQGRKIILSGHNVPGEGEHKIMDYIRTERAKSDYDPNTRHCMYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLG+ +HEP+F+++REE N RP + + N + T F
Sbjct: 211 MLGIVSHEPHFSLLREEVTFN-TRPRK---------------NEQKNKKPKRTDSDVKTF 254
Query: 299 IFVRLSVLREYLEKELA 315
+ LS+LREYL E A
Sbjct: 255 HLLHLSLLREYLAWEFA 271
>gi|348581618|ref|XP_003476574.1| PREDICTED: 5'-3' exoribonuclease 1-like [Cavia porcellus]
Length = 1639
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 173/259 (66%), Gaps = 32/259 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++KE +KI +K + G LP E + FDSNCITPGT FMARL L Y+
Sbjct: 102 FRSAKEAEDKI-------KKAVEKGETLPTE----ARFDSNCITPGTEFMARLHEHLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++ +++ D W+G+ + S PGEGEHKIM++IR ++A+ DHDPNT+HCL G DADLI
Sbjct: 151 VNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKQDHDPNTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFK 257
MLGL +HE +F+++REE +
Sbjct: 211 MLGLTSHEAHFSLLREEVR 229
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
D +E E +D +K YY +K DV DD V YV + W+L YYY
Sbjct: 323 DNLEDETEDDDLFETEFRQYKRTYYMTKMGVDVVSDDFLADQAVC--YVQAIQWILHYYY 380
Query: 454 QGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
G +SW W++P+HYAPF SD NI+ + +FE G
Sbjct: 381 HGVQSWSWFYPYHYAPFLSDIRNISTLKIHFELG 414
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 446 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMEACNHSLKEEE 498
>gi|301094845|ref|XP_002896526.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
gi|262109022|gb|EEY67074.1| 5'-3' exoribonuclease 1, putative [Phytophthora infestans T30-4]
Length = 1480
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 216/378 (57%), Gaps = 53/378 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+R++S +YP + Q I S P EFD YLDMNGI+H
Sbjct: 1 MGIPRFYRYMSERYPLL-------------NQPISDVSLLP-----EFDAFYLDMNGIVH 42
Query: 61 PCTH---PEDKPAPKDEDEMMVAIFECIDRLF-RIVRPRKLLYMAIDGVAPRAKMNQQRS 116
CTH +D + + IF +DRL I++P+KL+Y+AIDGVAPRAK+NQQRS
Sbjct: 43 NCTHSDAADDALNSLSLEGQLHGIFTYLDRLITHIIKPKKLVYIAIDGVAPRAKLNQQRS 102
Query: 117 RRFRASKETAEKIAEVARIREKLL--ADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RRFRA + + + + ++ KL DG K S FDSNCITPGT F+++LS
Sbjct: 103 RRFRAGLDRQQAMDKERHMQIKLQDEKDGH---KAKSVASKFDSNCITPGTEFLSKLSQH 159
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y++ ++ +DP W ++V S + VPGEGEHKI+++IR ++ D++ N +HC+ G+D
Sbjct: 160 LVYFVRQKMKSDPLWARLEVFFSGSEVPGEGEHKIVEFIRHRKMTDDYEANLRHCMYGSD 219
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADL++LGL THEP+FT++RE G K+ E
Sbjct: 220 ADLMLLGLMTHEPHFTLVRETVV------------WGSHHKKVAAKQIE----------- 256
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
E ++ V LS+ REYL E+ + + P ER LDD++ + F +GNDF+PH P+LEI E
Sbjct: 257 EQQWQLVHLSLFREYLMMEMRVQS---PLDGERMLDDFILLTFLLGNDFIPHSPTLEISE 313
Query: 355 GAVDRLVNLYKKTVYKTQ 372
A+ L+ +Y++ + Q
Sbjct: 314 DAIPLLLKVYRELLETHQ 331
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRI 496
V Y+ L W L YY+QG +SW WY+P+HYAP SD +I E+ N + P +
Sbjct: 484 VKKAYMEALVWCLAYYFQGPQSWAWYYPYHYAPMVSDLTDIEEMIGNVKFDEDPSIAGPL 543
Query: 497 LKF 499
L F
Sbjct: 544 LPF 546
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPI FYPE F ID+ GK+ AW+GV LLPF+D L +A+A + + E+E
Sbjct: 574 SPIKHFYPETFAIDMEGKRNAWEGVNLLPFIDVALLKQAIAQFCPDSQLTEAE 626
>gi|401420072|ref|XP_003874525.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490761|emb|CBZ26025.1| putative exoribonuclease 2 [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 893
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/374 (40%), Positives = 213/374 (56%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ FF WL R Y C+++ PQ+V GQ +P + + +DN Y+DM
Sbjct: 1 MGIAGFFLWLQRWYGD----CIDNIPQDVVDAAFKGQALPHSHA----SAYSYDNFYVDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P++E+EM +F+ +D L R+VRP+K L + +DGVAPR+KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+ E E A ++++++ + P +D N ITP T FM R++
Sbjct: 113 RSRRFRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +YI +LN D GW+ + V+ SDA+VPGEGEHKIM YIR R+QP +D NT H + G D
Sbjct: 171 LEWYIMKKLNEDAGWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + I+R E F+P+ R
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQPDHNR---------------------------- 262
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + LS RE L ++ A N+ FER +DD++F+CFFVGNDFLPH+P +
Sbjct: 263 -------FCYFNLSTYREKLMQDFA--NIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 351 EIREGAVDRLVNLY 364
I+ ++ L++ Y
Sbjct: 313 SIKTRGIEMLLDHY 326
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 415 FKDRYYESKF--DVPKDDIAF----RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYA 468
++D YY+ KF D + AF RL EY+ G+ WV++YY +GC SW+WYFP+HYA
Sbjct: 442 YRDAYYQHKFGWDPSTNRAAFERQIRLCCA-EYLRGMQWVMRYYTKGCPSWEWYFPYHYA 500
Query: 469 PFASD---FINIAEVDTNFETGTQPV 491
P D F V+ PV
Sbjct: 501 PLLQDLAAFTATVNVEMRMSAPLHPV 526
>gi|303390661|ref|XP_003073561.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
gi|303302708|gb|ADM12201.1| 5-3 exoribonuclease [Encephalitozoon intestinalis ATCC 50506]
Length = 656
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 257/547 (46%), Gaps = 99/547 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL + VH + +KP D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHREA-VHSIMEKPS--------------------VDCLYLDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P + E ++ + + ID + RPRKLLY+AIDGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDYILLRTRPRKLLYIAIDGVAPRAKLSHQRARRYK 99
Query: 121 AS----------------------KETAEKIAEVARIREKLLADGCILPPEKEKGS---- 154
++ E E+ +V E L D I E S
Sbjct: 100 SALGKKEGKAPVSTGKTDPTASSISEKTEEATDVEFTGESSLYDKFIAEDLSESSSLAMD 159
Query: 155 ----HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIM 210
FD NCITPGTPFM RL L YI +L+ DP +++I S VPGEGE KIM
Sbjct: 160 VEAEKFDLNCITPGTPFMERLHNVLISYIQYKLSKDPEVSHLRIIYSSYLVPGEGEQKIM 219
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARP---CDVC 267
+IR Q +D H + D DLI LGL+ ++ I+R+ F P++AR C C
Sbjct: 220 SFIRNQIPAAKND---VHMIYSPDGDLIFLGLSLYKSRVLIMRDYFSPSKARKKKICTKC 276
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
G+ GH EC D F++V ++ LR L +E + ++ ER
Sbjct: 277 GRTGHSNDECGVFD-------------NYHFVYVNIAELRSRLIREFR-KHTTQRFNEER 322
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQ------------- 374
L DW+F+CF +GNDF+P +P L+IR ++D L + K +T+
Sbjct: 323 LLSDWIFLCFLLGNDFVPSIPCLDIRFHSIDTLTEIMMKNFSETKSYITCNTSINYQVLR 382
Query: 375 -----LRQEENGGGGGRGVKRSFDDVDESSEEEES--NDEVRLWEDGFKDRYYESKFDVP 427
L ++E+G + +S D + E ++ + +++ + K +YY SK +
Sbjct: 383 NFYTILARKEDGLYHRKS--QSLDRLREELKDMPNIIYEKIPIHTKTGKIQYYTSKLNAK 440
Query: 428 KD-DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF--INIAEVDTNF 484
D DI + +EY+ L WV YY G W WY+P H+AP A+D ++I+E+ N
Sbjct: 441 TDSDIK---NICYEYIKALYWVYSYYILGYTGWDWYYPHHFAPLAADLSKLSISEIRINS 497
Query: 485 ETGTQPV 491
+P+
Sbjct: 498 GLPLRPL 504
Score = 39.3 bits (90), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
D+YPED + D+ K + WQ V LLPF+D + A + L E+
Sbjct: 532 DYYPEDVETDMFDKVYLWQEVVLLPFMDFRSILSENASRFNSLGYED 578
>gi|190345127|gb|EDK36952.2| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 195/332 (58%), Gaps = 44/332 (13%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH D + +D+M AIF I+ LF I++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR + E E + +K ++ G +P K FDSN ITPGT FMA+L+
Sbjct: 61 QRARRFRTAYEAEENL-------KKAISQGLEIP----KDDPFDSNAITPGTEFMAKLTE 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH +++ D W +ILS VPGEGEHKIM+YIR ++QP+++ N++HC+ G
Sbjct: 110 NLKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIMLGL +H+P+F ++REE F P + H+ K
Sbjct: 170 DADLIMLGLVSHDPHFCLLREEVTFGPRSGNKSNDL----HDQK---------------- 209
Query: 292 FGSEVEFIFVRLSVLREYLEKELA-MPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
F + +S+LREY+ E M N + F + FER LDD + + + +GNDFLP LP
Sbjct: 210 ------FFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPSLPD 263
Query: 350 LEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
L I +GA L+ +K+ + ++ + ENG
Sbjct: 264 LYINKGAFPLLLETFKQALAESDGYIN--ENG 293
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ KF D + + Y+ GL WVL YYYQGC SW WY+ +HYAP SD
Sbjct: 478 WKDQYYQEKFKFSIHDKEEMVNLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDI 537
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP+ ID+NGK +W+ V LL FVDE+RL + L P KL+ EE++
Sbjct: 590 SPIIDFYPDKVDIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETK 642
>gi|449019218|dbj|BAM82620.1| deoxyribonuclease [Cyanidioschyzon merolae strain 10D]
Length = 1527
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 214/372 (57%), Gaps = 44/372 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWLS +YP + NG P S P DN YLDMNGI+H
Sbjct: 1 MGVPRFYRWLSERYPLI------------NG---PVSRSNAPP----VDNFYLDMNGILH 41
Query: 61 PCTHPEDKP-APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C + P + ++++ ID L +++P++LL++A+DGVAPRAKMNQQR+RR+
Sbjct: 42 NCARSAENPLGGRSDEDIYWESCNYIDMLVTLIQPKRLLFLAVDGVAPRAKMNQQRARRY 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSH--FDSNCITPGTPFMARLSACLHY 177
+ EK+AE + R L E E G FDSNCITPGT FM LS L Y
Sbjct: 102 -RAATALEKVAETSHQRGNTTQR---LRTESEAGPDRVFDSNCITPGTTFMHGLSRALLY 157
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
Y+ +L +D W+ ++VI+S A VPGEGEHKIM+YIR+ + Q PNT+HC+ G DADL
Sbjct: 158 YVAVKLESDRSWQDLEVIVSGAEVPGEGEHKIMEYIRQLKEQKRMPPNTRHCIYGLDADL 217
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I LGL THEP+F ++RE+ A ++ E +D + +
Sbjct: 218 IFLGLVTHEPHFFLLREKIDFQAA-----FRKVRFEKVTATKMDRD----------IRGD 262
Query: 298 FIFVRLSVLREYLEKELAMPNLPFP---YSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + L +LREYL E A P Y+ ER +DD+VF+ F VGNDF+PH P+LEIRE
Sbjct: 263 FELLSLGILREYLSLEFAYLEKRLPAGVYNLERIIDDFVFVAFLVGNDFMPHSPTLEIRE 322
Query: 355 GAVDRLVNLYKK 366
GA++ ++ LYK+
Sbjct: 323 GALNSILFLYKE 334
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 415 FKDRYYESKFDVPKD-DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
+K RYY K + D D A + Y+ + W L+YY G SW+W++P+HYAPF SD
Sbjct: 502 YKRRYYHEKLGIDYDHDAAAVRRICRSYLEAIVWTLEYYLNGVASWRWFYPYHYAPFCSD 561
Query: 474 FINIAEV--DTNFETGT 488
+ + + + E GT
Sbjct: 562 MVGLQALAQEIRLEQGT 578
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
SP+ D YP ID+ GK+ W+G+ LLPF+DE RL ALA
Sbjct: 610 SSPLADLYPSQVAIDMQGKRNEWEGIVLLPFMDENRLFAALA 651
>gi|209878396|ref|XP_002140639.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
gi|209556245|gb|EEA06290.1| XRN 5'-3' exonuclease domain-containing protein [Cryptosporidium
muris RN66]
Length = 1610
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/425 (36%), Positives = 224/425 (52%), Gaps = 106/425 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F+RW+S +YP + EV G N + FDNLYLD+NGI H
Sbjct: 1 MGISRFYRWISERYPQI---------NEVIG----------NGDTPIFDNLYLDVNGIAH 41
Query: 61 PCTHPEDKPAPKD--------EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
+ + E+ IF+ I RL V+P+K++Y+A+DGVAPRAKMN
Sbjct: 42 NSIYNNEMTVSYSGLNLSFGGSPEIWTGIFKYISRLVNTVKPKKVVYIAVDGVAPRAKMN 101
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQRSRRFR++++ A + E +R A+ K + FDSNCITPGT FM L+
Sbjct: 102 QQRSRRFRSARDAA--LMEELAVRNSEFAN---------KTNTFDSNCITPGTSFMYELN 150
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L +++H ++ NDP W+ ++VILS +++PGEGEHKIMDYIR ++QPD++ NT+HCL G
Sbjct: 151 RQLKFFVHYQIQNDPIWRNLEVILSGSDIPGEGEHKIMDYIRCIKSQPDYNNNTRHCLYG 210
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIML LA+HEP+F+++REE K ++ D + I F
Sbjct: 211 LDADLIMLSLASHEPHFSLLREEIKFVPSKVLD----------------------NRIIF 248
Query: 293 GSEVEFIFVRLSVLREYLEKEL-----------------------------------AMP 317
+ +F F+ +S+LREYL +EL P
Sbjct: 249 TKD-KFQFLHISILREYLVRELNPIYSVSKLDLNVRYMEEMGVQDIVSGCKDESITVTTP 307
Query: 318 ---------NLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
NL F ER +DD++F+ + VGNDFLPH+P + G +DR++ Y+ +
Sbjct: 308 KLVQSSFNINLDFKMDEERLIDDFIFLGYIVGNDFLPHIPFHTVDNG-LDRILCSYRNYL 366
Query: 369 YKTQE 373
Q+
Sbjct: 367 ASFQQ 371
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 661 FAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
F + SPIID+YP F ID+ G K W GV L+PF+DEE L K+++
Sbjct: 625 FMNKKSPIIDYYPSQFDIDMEGIKVPWGGVTLIPFIDEELLLKSIS 670
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y+ GL W+ YY++G SW+W++ + YAP+A D I
Sbjct: 511 YLEGLQWISYYYFRGTPSWRWFYSYRYAPYACDIAAI 547
>gi|146423491|ref|XP_001487673.1| hypothetical protein PGUG_01050 [Meyerozyma guilliermondii ATCC
6260]
Length = 1378
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 194/332 (58%), Gaps = 44/332 (13%)
Query: 55 MNGIIHPCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
MN I+H CTH D + +D+M AIF I+ LF I++P+ + YMAIDGVAPRAKMNQ
Sbjct: 1 MNSILHTCTHSNDDTLSRMTDDQMYAAIFSYIEHLFEIIKPKGVFYMAIDGVAPRAKMNQ 60
Query: 114 QRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
QR+RRFR + E E + +K + G +P K FDSN ITPGT FMA+L+
Sbjct: 61 QRARRFRTAYEAEENL-------KKAILQGLEIP----KDDPFDSNAITPGTEFMAKLTE 109
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
L Y+IH +++ D W +ILS VPGEGEHKIM+YIR ++QP+++ N++HC+ G
Sbjct: 110 NLKYFIHKKISTDSRWAETVIILSGHEVPGEGEHKIMNYIRTMKSQPNYNSNSRHCIYGL 169
Query: 234 DADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
DADLIMLGL +H+P+F ++REE F P + H+ K
Sbjct: 170 DADLIMLGLVSHDPHFCLLREEVTFGPRSGNKSNDL----HDQK---------------- 209
Query: 292 FGSEVEFIFVRLSVLREYLEKELA-MPN-LPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
F + +S+LREY+ E M N + F + FER LDD + + + +GNDFLP LP
Sbjct: 210 ------FFLLHISLLREYISLEFQDMDNDVSFEFDFERVLDDLILIMYVIGNDFLPSLPD 263
Query: 350 LEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
L I +GA L+ +K+ + ++ + ENG
Sbjct: 264 LYINKGAFPLLLETFKQALAESDGYIN--ENG 293
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 415 FKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+KD+YY+ KF D + + Y+ GL WVL YYYQGC SW WY+ +HYAP SD
Sbjct: 478 WKDQYYQEKFKFSIHDKEEMVNLTEHYIEGLQWVLYYYYQGCPSWSWYYRYHYAPRISDI 537
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP+ ID+NGK +W+ V LL FVDE+RL + L P KL+ EE++
Sbjct: 590 SPIIDFYPDKVDIDMNGKTASWEAVVLLSFVDEKRLIETLKPIEAKLTPEETK 642
>gi|399216467|emb|CCF73155.1| unnamed protein product [Babesia microti strain RI]
Length = 1209
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 250/523 (47%), Gaps = 91/523 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVED-KPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGV FFR+++ +YP + E + DS+ P FD LYLDMNGI+
Sbjct: 1 MGVGHFFRYIAERYPLICQQISRSFSDNEAALSEFYSDSTLP------FDALYLDMNGIV 54
Query: 60 HPCTHPEDKPAPKDED---EMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
H C + +K +D ++ ++IF+ I ++ + +P+KLLY+A+DGVAP+AKMNQQR+
Sbjct: 55 HICAY-SNKEFSRDISSLGDIWLSIFQYITKIVNLAKPKKLLYLAVDGVAPKAKMNQQRT 113
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFR+ E+ E+ A + K A+G P + G FD CITPGT FM + +
Sbjct: 114 RRFRSVAES-EQRANLNEECAKYFANGYDDPVRGKDGFVFDPTCITPGTKFMHEFTTQIE 172
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+ + D W +KVI+S ANVPGEGEHKI +YIR + Q HC+ G DAD
Sbjct: 173 KYVAKMIKADTYWSKLKVIVSGANVPGEGEHKIAEYIRNTKGQSI----KSHCIYGLDAD 228
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LIML L HEP+ ++RE + MK + P ++
Sbjct: 229 LIMLSLLFHEPHICLLRESII------------FTNMMKNNITYRLLPKDDN-------- 268
Query: 297 EFIFVRLSVLREYLEKELA---MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F+ + + VLREYL +EL M PF RA+DD++ +C VGNDFLPHL ++I
Sbjct: 269 -FVLLHIRVLREYLARELLPVHMLKEPF---ISRAIDDFILICLLVGNDFLPHLKFVQIP 324
Query: 354 EGAVDRLVNLYKKTVYKTQ---------------------------------EQLRQEEN 380
+ L+ LY++ V K Q E+LR
Sbjct: 325 NRGLTILMKLYREHVGKNQKNPWLTIDCGEIDLRNFCNFLDKYCRVETKQILEKLRDPNE 384
Query: 381 GGGGGRGVKRSFDDVDESSEEEESNDEVRLW------EDGFKDRYYESKFDVPKDDIAFR 434
K + D E++ R++ D + RYY +K + D R
Sbjct: 385 H-------KPTLIDTARHKIEKDYTTYSRMFPKPATTPDQWASRYYYAKMGL--TDEQSR 435
Query: 435 LMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
+ +Y++G+ WVL YYY+ W WY P Y P A D I
Sbjct: 436 EEIVKQYLIGIQWVLYYYYRCVPDWNWYLPCPYPPLAQDMSKI 478
>gi|325185573|emb|CCA20056.1| 5'3' exoribonuclease 1 putative [Albugo laibachii Nc14]
Length = 1515
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 212/380 (55%), Gaps = 59/380 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+ ++S +YP + Q I S P EFD YLDMNGI+H
Sbjct: 1 MGIPRFYAYISERYPLI-------------NQTISGLSLLP-----EFDCFYLDMNGILH 42
Query: 61 PCTH---PEDKPAPKDEDEMMVAIFECIDRLFR-IVRPRKLLYMAIDGVAPRAKMNQQRS 116
CTH D +P +E AI +DRL IV+PRKL+Y+AIDGVAPRAK+NQQRS
Sbjct: 43 VCTHNNNSSDDASPATFEEQFQAIVRYLDRLVTCIVKPRKLVYLAIDGVAPRAKLNQQRS 102
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRF A EK+ E+A EK +G EK+ FDS+CITPGT F+ R+S L
Sbjct: 103 RRFSAGLVRQEKVKELALEMEK---NGTTC--EKDL---FDSSCITPGTEFLERISEQLV 154
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y+I ++ NDP W ++V S + VPGEGEHKIMD+IR+++ +D N +HC+ G+DAD
Sbjct: 155 YFIRHKIKNDPLWSRLEVYFSGSEVPGEGEHKIMDFIRQRKMSARYDANVRHCMYGSDAD 214
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
L++L L HEP+FT+IRE G E K+ E
Sbjct: 215 LMLLSLMAHEPHFTLIREHVDWGSGGFKSKGKLSGSEKKKI----------------QED 258
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYS----------FERALDDWVFMCFFVGNDFLPH 346
++ V LS+ REYL E+ + +P ER +DD++F+ F GNDF+PH
Sbjct: 259 QWQLVHLSLFREYLMMEM---RVKYPLGGQVQIDERLDGERMIDDFIFLTFLFGNDFIPH 315
Query: 347 LPSLEIREGAVDRLVNLYKK 366
P+LEIRE A+ L+ +Y++
Sbjct: 316 SPTLEIRENAIPILLKVYRE 335
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 419 YYESKFDVPKDD----IAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
YYE KF + + D + + ++ L W L YY+QG SW WY+P HY+P SD
Sbjct: 464 YYERKFGLQRGDGDAGNSDLQEIRKHFLEALVWCLAYYFQGPPSWSWYYPHHYSPMISDL 523
Query: 475 INIAEV 480
IA++
Sbjct: 524 TGIADI 529
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
SPI FYP F++D+ GK+ W+GV +LPF+D E+L A+
Sbjct: 579 SPIKHFYPATFQVDMEGKRNDWEGVTVLPFIDIEQLRAAI 618
>gi|339237353|ref|XP_003380231.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
gi|316976968|gb|EFV60153.1| 5'-3' exoribonuclease 1 [Trichinella spiralis]
Length = 614
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 63/357 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP + VE +IP +DNLYLD NGIIH
Sbjct: 1 MGVPRFFRWLSERYPGLSQLVVE--------SQIP-----------SYDNLYLDFNGIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C+HP +P A F C + LF++++PRK+L++A+DGVAPRAKMNQQRSRRF
Sbjct: 42 NCSHPN---SPD-------ATFRCTEGLFQLIKPRKVLFIAVDGVAPRAKMNQQRSRRFM 91
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
++KE AE +R+ K + +G ++P FDSNCITPGT FM RL L Y+I+
Sbjct: 92 SAKE-----AEDSRL--KAIRNGEVIP----DSDPFDSNCITPGTEFMERLHIHLKYFIN 140
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+L++DP W+ + V S + PGEGEHKI+ +IR R+Q D+D NT HC+ G DADLI L
Sbjct: 141 LKLSSDPLWQNVDVYYSGHDCPGEGEHKILAFIRFMRSQADYDSNTTHCIYGLDADLIFL 200
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
G+A HEP F+I+REE + K + D + + +++ F +F +
Sbjct: 201 GMAMHEPYFSILREEVVYD-----------SRSKKRYIKCDDDDDNNNLLRFAYG-QFAY 248
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
R S E P++ Y E+ +DDW+FM FF+GNDF+P++P L E A+
Sbjct: 249 GRRS--------EQVKPDV---YDEEKIIDDWIFMSFFIGNDFIPNVPMLITNENAL 294
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSP+ YPED + D+NGKK+ W+ + LPF+DEE L A+ P+ + L +E
Sbjct: 510 DSPLSYAYPEDVERDMNGKKYEWECILKLPFIDEEILFDAVYPFNDALKDDE 561
>gi|85014269|ref|XP_955630.1| 5-3 exoribonuclease [Encephalitozoon cuniculi GB-M1]
gi|19171324|emb|CAD27049.1| RIBONUCLEIC TRAFFICKING PROTEIN 1 (5'3'exoribonuclease)
[Encephalitozoon cuniculi GB-M1]
Length = 655
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 251/542 (46%), Gaps = 99/542 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL + I H + +KP D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHKETI-HSIMEKPS--------------------VDALYLDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P + E ++ + + ID + RPRKLLY+A+DGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYK 99
Query: 121 ASKETAEKIAEVARIR----------------------EKLLADGCILPPEKEKGS---- 154
++ E A +A + E L D I E S
Sbjct: 100 SALGKKEGSAVIAAAKADPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAID 159
Query: 155 ----HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIM 210
FD NCITPGTPFM RL L YI +L++DP +++I S VPGEGE KIM
Sbjct: 160 VETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKIM 219
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ---ARPCDVC 267
+IR Q + +D H + D DLI LGL+ I+R+ F P++ R C C
Sbjct: 220 SFIRSQGSIARND---VHMIYSPDGDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTKC 276
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
G+ GH +EC V T F++V +S LR L +E + +S ER
Sbjct: 277 GRTGHSDEEC----------GVFT---NYHFVYVNISELRTRLIREFRR-HTAQRFSEER 322
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
LDDW+F+CF +GNDF+P +P L+IR +++ + + K+ + + + +
Sbjct: 323 ILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMINYQAL- 381
Query: 388 VKRSFDDVDESSEE------EESNDEVRLWEDGF---------------KDRYYESKFDV 426
R+F + S E+ +S D+ R G K +YY SK +
Sbjct: 382 --RNFYAILASKEDGLYHRKSQSLDKFREGLKGMPRIVYEKIPIHTKTGKVQYYTSKLNA 439
Query: 427 PKD-DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
+ DI + +EYV GL WV YY G W WY+P+H+AP A+D ++ D
Sbjct: 440 TTESDIK---NICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAPLAADLSKLSINDIQIS 496
Query: 486 TG 487
G
Sbjct: 497 PG 498
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVD 697
D+YPED K D+ K + WQ + LLPF+D
Sbjct: 532 DYYPEDVKTDMFDKVYLWQEIVLLPFMD 559
>gi|449330168|gb|AGE96430.1| ribonucleic trafficking protein 1 [Encephalitozoon cuniculi]
Length = 655
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 251/542 (46%), Gaps = 99/542 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL + I H + +KP D LYLD N IIH
Sbjct: 1 MGVPSLFRWLQLSHKETI-HSIMEKPS--------------------VDALYLDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C P + E ++ + + ID + RPRKLLY+A+DGVAPRAK++ QR+RR++
Sbjct: 40 TCIKPGLGSEEEIERDLYKTVGDFIDHILLKTRPRKLLYIAVDGVAPRAKLSHQRARRYK 99
Query: 121 ASKETAEKIAEVARIR----------------------EKLLADGCILPPEKEKGS---- 154
++ E A +A + E L D I E S
Sbjct: 100 SALGKKEGSAVIAAAKTDPTMSSPSEKKDEIPNEEFTGESSLYDKFIAEDPSESSSLAID 159
Query: 155 ----HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIM 210
FD NCITPGTPFM RL L YI +L++DP +++I S VPGEGE KIM
Sbjct: 160 VETEKFDLNCITPGTPFMERLHKVLISYIQCKLSSDPEVSNLRIIYSSYLVPGEGEQKIM 219
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ---ARPCDVC 267
+IR Q + +D H + D DLI LGL+ I+R+ F P++ R C C
Sbjct: 220 SFIRSQGSIARND---VHMIYSPDGDLIFLGLSLQRNRVLIMRDYFSPSKERRKRTCTKC 276
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
G+ GH +EC V T F++V +S LR L +E + +S ER
Sbjct: 277 GRTGHSDEEC----------GVFT---NYHFVYVNISELRTRLIREFRR-HTAQRFSEER 322
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
LDDW+F+CF +GNDF+P +P L+IR +++ + + K+ + + + +
Sbjct: 323 ILDDWIFLCFLLGNDFVPPIPCLDIRFHSIETITEIMMKSFSEMKSYITCNKMINYQAL- 381
Query: 388 VKRSFDDVDESSEE------EESNDEVRLWEDGF---------------KDRYYESKFDV 426
R+F + S E+ +S D+ R G K +YY SK +
Sbjct: 382 --RNFYAILASKEDALYHRKSQSLDKFREGLKGMPRIVYEKIPIHTKTGKVQYYTSKLNA 439
Query: 427 PKD-DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
+ DI + +EYV GL WV YY G W WY+P+H+AP A+D ++ D
Sbjct: 440 TTESDIK---NICYEYVKGLYWVYSYYVLGWTGWDWYYPYHFAPLAADLSKLSINDIQIS 496
Query: 486 TG 487
G
Sbjct: 497 PG 498
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVD 697
D+YPED K D+ K + WQ + LLPF+D
Sbjct: 532 DYYPEDVKTDMFDKVYLWQEIVLLPFMD 559
>gi|398024282|ref|XP_003865302.1| exoribonuclease 2, putative [Leishmania donovani]
gi|322503539|emb|CBZ38625.1| exoribonuclease 2, putative [Leishmania donovani]
Length = 879
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 212/374 (56%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ FF WL R Y C+++ PQ+V GQ +P + + +DN Y+DM
Sbjct: 1 MGIAGFFLWLQRWYGD----CIDNIPQDVVDAAFKGQTLPHSHA----SAYSYDNFYVDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P++E+EM +F+ +D L R+VRP+K L + +DGVAPR+KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+ E E A ++++++ + P +D N ITP T FM R++
Sbjct: 113 RSRRFRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +YI +LN D W+ + V+ SDA+VPGEGEHKIM YIR R+QP +D NT H + G D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + I+R E F+P+ R
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQPDHNR---------------------------- 262
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + LS RE L ++ + N+ FER +DD++F+CFFVGNDFLPH+P +
Sbjct: 263 -------FCYFNLSTYREKLMQDFS--NIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 351 EIREGAVDRLVNLY 364
I+ ++ L++ Y
Sbjct: 313 SIKTRGIEMLLDHY 326
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 412 EDGFKDRYYESKF--DVPKDDIAF----RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
+ ++D YY+ KF D + AF RL EY+ GL WV++YY +GC SW+WYFP+
Sbjct: 439 DKAYRDAYYQHKFGWDPSANRAAFESHIRLCCA-EYLRGLQWVMRYYTKGCPSWEWYFPY 497
Query: 466 HYAPFASD---FINIAEVDTNFETGTQPV 491
HYAP D F V+ PV
Sbjct: 498 HYAPLLQDLAAFTATVNVEMRMSAPLHPV 526
>gi|146104232|ref|XP_001469769.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
gi|134074139|emb|CAM72881.1| putative exoribonuclease 2 [Leishmania infantum JPCM5]
Length = 879
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 149/374 (39%), Positives = 212/374 (56%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ FF WL R Y C+++ PQ+V GQ +P + + +DN Y+DM
Sbjct: 1 MGIAGFFLWLQRWYGD----CIDNIPQDVVDAAFKGQTLPHSHA----SAYSYDNFYVDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P++E+EM +F+ +D L R+VRP+K L + +DGVAPR+KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+ E E A ++++++ + P +D N ITP T FM R++
Sbjct: 113 RSRRFRAADERLESDAISNACADRIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +YI +LN D W+ + V+ SDA+VPGEGEHKIM YIR R+QP +D NT H + G D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + I+R E F+P+ R
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQPDHNR---------------------------- 262
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + LS RE L ++ + N+ FER +DD++F+CFFVGNDFLPH+P +
Sbjct: 263 -------FCYFNLSTYREKLMQDFS--NIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 351 EIREGAVDRLVNLY 364
I+ ++ L++ Y
Sbjct: 313 SIKTRGIEMLLDHY 326
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 412 EDGFKDRYYESKF--DVPKDDIAF----RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
+ ++D YY+ KF D + AF RL EY+ GL WV++YY +GC SW+WYFP+
Sbjct: 439 DKAYRDAYYQHKFGWDPSANRAAFESHIRLCCA-EYLRGLQWVMRYYTKGCPSWEWYFPY 497
Query: 466 HYAPFASD---FINIAEVDTNFETGTQPV 491
HYAP D F V+ PV
Sbjct: 498 HYAPLLQDLAAFTATVNVEMRMSAPLHPV 526
>gi|157876822|ref|XP_001686753.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
gi|68129828|emb|CAJ09134.1| putative exoribonuclease 2 [Leishmania major strain Friedlin]
Length = 895
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 211/374 (56%), Gaps = 58/374 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-----NGQKIPFDSSKPNPNGMEFDNLYLDM 55
MG+ FF WL R Y C+++ PQ+V GQ +P + + +DN Y+DM
Sbjct: 1 MGIAGFFLWLQRWYGD----CIDNIPQDVVDAAFKGQALPHSHA----SAYSYDNFYVDM 52
Query: 56 NGIIHPCTH-PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
NG+IHPC H P P++E+EM +F+ +D L R+VRP+K L + +DGVAPR+KMNQQ
Sbjct: 53 NGLIHPCCHDTAPLPEPENEEEMFERMFDQLDLLVRVVRPKKCLVLCVDGVAPRSKMNQQ 112
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRFRA+ E E A + ++++ + P +D N ITP T FM R++
Sbjct: 113 RSRRFRAADERLESDAISNACADSIVSEYHL--PRPRVRERWDHNVITPSTAFMERVALA 170
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +YI +LN D W+ + V+ SDA+VPGEGEHKIM YIR R+QP +D NT H + G D
Sbjct: 171 LEWYIMKKLNEDAAWRHLTVVFSDAHVPGEGEHKIMQYIRGLRSQPGYDYNTSHVIHGMD 230
Query: 235 ADLIMLGLATHEPNFTIIR----EEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
ADLI LGL+THE + I+R E F+P+ R
Sbjct: 231 ADLICLGLSTHEKHVCILRNQLTETFQPDHNR---------------------------- 262
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
F + LS RE L ++ A N+ FER +DD++F+CFFVGNDFLPH+P +
Sbjct: 263 -------FCYFNLSTYREKLMQDFA--NIE-GMQFERVVDDFIFLCFFVGNDFLPHVPLV 312
Query: 351 EIREGAVDRLVNLY 364
I+ ++ L++ Y
Sbjct: 313 SIKTRGIEMLLDHY 326
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 415 FKDRYYESKF--DVPKDDIAF----RLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYA 468
++D YY+ KF D + AF RL EY+ G+ WV++YY +GC SW+WYFP+HYA
Sbjct: 442 YRDAYYQHKFGWDPSTNRAAFESQIRLCCA-EYLRGMQWVMRYYTKGCPSWEWYFPYHYA 500
Query: 469 PFASD---FINIAEVDTNFETGTQPV 491
P D F V+ PV
Sbjct: 501 PLLQDLAAFTATVNVEMRMSAPLHPV 526
>gi|312075567|ref|XP_003140474.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
gi|307764361|gb|EFO23595.1| single-stranded RNA 5'-3' exonuclease [Loa loa]
Length = 258
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 174/264 (65%), Gaps = 32/264 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + Q+ ++IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVQD---EQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D+ E+E+ IF I+ LF I++PRK+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 SCSHPDDEDVSFRISEEEIFRDIFNYINFLFGIIKPRKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F ++K E + K +G +P EK FDSNCITPGT FMARL L Y+
Sbjct: 102 FMSAKNAQEAM-------NKARKNGVKIPDEKP----FDSNCITPGTHFMARLHEQLQYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ ++ D W+G+++ LS N PGEGEHKIMD+IR +R++ D+D NT+HCL G DADLI
Sbjct: 151 VQMKITTDSCWQGLRIYLSGHNCPGEGEHKIMDFIRSERSRSDYDANTRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQAR 262
MLG+ +HEP+F ++REE K + R
Sbjct: 211 MLGICSHEPHFALLREEVKFGRQR 234
>gi|336472444|gb|EGO60604.1| hypothetical protein NEUTE1DRAFT_127448 [Neurospora tetrasperma
FGSC 2508]
gi|350294329|gb|EGZ75414.1| 5'-3' exoribonuclease 1 [Neurospora tetrasperma FGSC 2509]
Length = 1226
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/316 (45%), Positives = 189/316 (59%), Gaps = 55/316 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRWLS +YP++ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWLSERYPAI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + D E+EM +AIF I+ LF ++P+KL +MAIDGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDTSDVQFRMTEEEMFIAIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + + + R+K + +G LP E+ FDSNCITPGT FMA+LS L Y+
Sbjct: 102 FRTALDNE-------KARDKAIREGKELPKEEP----FDSNCITPGTEFMAKLSQQLRYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
IH +++ D W+ +++LS VPGEGEHKIM+YIR RAQ D+D N +HCL G DADLI
Sbjct: 151 IHKKVSEDRDWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQLDYDANVRHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +H+P+F ++REE + G H+ K GL+ E F
Sbjct: 211 MLGLLSHDPHFCLLREEVTFGR-------GPAKHKAK---GLE-------------EQNF 247
Query: 299 IFVRLSVLREYLEKEL 314
+ L ++REYLE E
Sbjct: 248 YLMHLCIVREYLELEF 263
>gi|440492471|gb|ELQ75035.1| 5'-3' exonuclease HKE1/RAT1 [Trachipleistophora hominis]
Length = 606
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 173/566 (30%), Positives = 252/566 (44%), Gaps = 134/566 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ FRWL++KYP +I P ++ LY+D N IIH
Sbjct: 1 MGVPSLFRWLTKKYPQIIEKATPKNPTDI---------------------LYIDFNAIIH 39
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P D P P +EDEMM I + ID + PRK++ ++ DGVAPRAK+NQQR+RR+R
Sbjct: 40 ISCTPSDGPTPVNEDEMMNNIEKNIDSIVSKCLPRKMIVISTDGVAPRAKLNQQRARRYR 99
Query: 121 A-----------------------SKETAEKIAEVARIREKLLAD--------------G 143
+ +KE +K+A+ I+++ D G
Sbjct: 100 SIIEALELSKKSFENTKGANFVEKTKEKIQKLAKTPTIKDEYKVDFVGLMENSTSDEKTG 159
Query: 144 CILPPEKEKGSH------------------------------FDSNCITPGTPFMARLSA 173
+ EK FD N ITPGT FM L
Sbjct: 160 VVDETNNEKKEEDNELEDVEIDGFEKHPSDLLEESSLTEDEAFDKNAITPGTRFMYDLEK 219
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGA 233
+ +I +RL N+P +K + I S+ GEGE KIM IRK + + N +H +
Sbjct: 220 RMDKFIRERLANNPMYKNLCFIYSNGRRAGEGEQKIMTLIRKMKNR-----NLKHTIYSP 274
Query: 234 DADLIMLGLATHEPNFTIIREEFK---PNQARPCDVCGQMGHEMKECVGLDAEPNPESVI 290
DADLI LG + H N I+RE+ + + C+ CG+ GH C L
Sbjct: 275 DADLIFLGTSLHGRNVKIMREDLEFVYLQRQHFCEKCGKKGHLSTYCNKL---------- 324
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSL 350
+ IF L VL+ L +EL+M + Y F R DDW+ M F GNDFLP L
Sbjct: 325 ---ALFSCIFFDLIVLKRILSEELSML-ITTSYEFNRMADDWILMSFLAGNDFLPTLQCF 380
Query: 351 EIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRL 410
++R A++ L L + +T++ + + G V ++F + E+ + +L
Sbjct: 381 DVRFEAIEILTKLLAENFNRTKKYITYK---GEIDFAVLKNFFRILAHYEDHLYIKKKKL 437
Query: 411 WED--------GF-----------KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
D GF K RYY++K + + + V EY+LGL WV KY
Sbjct: 438 LTDTRRRFQIKGFFENISLETTYGKTRYYDTKLHLKSEREV--ITVCREYILGLSWVFKY 495
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINI 477
Y +G +W+W++P+ YAPFA D N+
Sbjct: 496 YVKGATNWEWFYPYDYAPFACDIANV 521
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%)
Query: 667 PIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEE 699
PI D +P + KID+ K WQGVA+LP +D E
Sbjct: 558 PIFDSFPTEIKIDMFDKLLPWQGVAILPIIDME 590
>gi|321466088|gb|EFX77085.1| hypothetical protein DAPPUDRAFT_24169 [Daphnia pulex]
Length = 288
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 185/344 (53%), Gaps = 67/344 (19%)
Query: 47 EFDNLYLDMNGIIHPCTHPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 105
E+DNLY+D+N I+H C A E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGT 165
APRAK QQR RRF SK P + E FD NC++PGT
Sbjct: 61 APRAKRTQQRIRRFGRSK-----------------------PNQDE----FDGNCVSPGT 93
Query: 166 PFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN 225
FM LS L Y+ +L+NDP WK I VI SD+NVPGEGEHKI D+IR+QR QP HDP
Sbjct: 94 SFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCHDPV 153
Query: 226 TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
T+H +CG DADLI+LGLA+HE N T++R +PN
Sbjct: 154 TKHVICGNDADLILLGLASHETNVTLLR----------------------------GDPN 185
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
++IFV + +LRE L +E + PF Y ER +DDW+F+C +GNDFLP
Sbjct: 186 SR---------KWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCILLGNDFLP 236
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK 389
+ + + LV + K K Q+ L NG VK
Sbjct: 237 SFQIFKNPDRTLTHLVRICKDAYNKNQDWL--THNGSINSVQVK 278
>gi|154295528|ref|XP_001548199.1| hypothetical protein BC1G_13389 [Botryotinia fuckeliana B05.10]
Length = 854
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/287 (46%), Positives = 185/287 (64%), Gaps = 20/287 (6%)
Query: 78 MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIRE 137
M+ IF+ DR+ +VRPRKLL +AIDGVAPRAKMNQQRSRRFR+++E EK + A + +
Sbjct: 1 MLEIFKYTDRVVNMVRPRKLLMIAIDGVAPRAKMNQQRSRRFRSAQEAKEKAEDKAELLK 60
Query: 138 KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILS 197
L + G + E E +DSN ITPGTPFM L+ L Y+I +LN DP W +KVI+S
Sbjct: 61 MLKSQGSHIE-ETEVKKAWDSNEITPGTPFMDILALSLRYWIAYKLNTDPAWAKMKVIIS 119
Query: 198 DANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE-- 255
D+ VPGEGEHKIM+++R QR+ PDH+PNT+H + G DADLIMLGLATHEP+F I+RE+
Sbjct: 120 DSTVPGEGEHKIMEFVRSQRSSPDHNPNTRHVMYGLDADLIMLGLATHEPHFRILREDVF 179
Query: 256 FKPNQARPCDVCGQMGHEMKECVGL----DAEPNPESVITFGSEVEFIFVRLSVLREYLE 311
F + R C +CGQ GHE +EC G+ D E + ++ + + FI++ +SVLREYL
Sbjct: 180 FNDGKPRTCKLCGQHGHEARECKGMYKIKDGEFDEKA--SAPTLKPFIWLHVSVLREYLA 237
Query: 312 KELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
E+ +D + + D +P++ ++G VD
Sbjct: 238 AEIL-----------EIREDGINTLIAIWRDNIPYMGGYLTKDGHVD 273
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 60/82 (73%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPF 465
D VRLWEDG+ DRYYE KF+ DI FR VG YV GL WVL YY+QGC SW WY+P+
Sbjct: 450 DTVRLWEDGYADRYYEQKFNRDPKDIEFRHEVGRAYVEGLAWVLLYYFQGCPSWDWYYPY 509
Query: 466 HYAPFASDFINIAEVDTNFETG 487
HYAPFA+DF N+ ++ +F+ G
Sbjct: 510 HYAPFAADFANLKDMKIDFQKG 531
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 40/49 (81%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
+DS IIDFYPEDF +DLNGKKFAWQGVALLPF+D ERL A+A Y L
Sbjct: 563 EDSEIIDFYPEDFVVDLNGKKFAWQGVALLPFIDSERLLDAMAKVYPTL 611
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT G V LER Q I+ L ED IF+KR++ E F+ + K+ R + +
Sbjct: 264 GYLTKDGHVDLERAQFILDGLAKQEDAIFRKRRKNEENFQKKRKLNNERNARGR------ 317
Query: 651 KAPSFIPGGQFAPQDSP 667
G PQDSP
Sbjct: 318 -------GNNGGPQDSP 327
>gi|321466089|gb|EFX77086.1| hypothetical protein DAPPUDRAFT_31800 [Daphnia pulex]
Length = 288
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 185/344 (53%), Gaps = 67/344 (19%)
Query: 47 EFDNLYLDMNGIIHPCTHPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 105
++DNLY+D+N I+H C A E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 DYDNLYIDLNEIVHNCVRAARFHKADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGT 165
APRAK QQR RRF SK P + E FD NC++PGT
Sbjct: 61 APRAKRTQQRIRRFGRSK-----------------------PNQDE----FDGNCVSPGT 93
Query: 166 PFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPN 225
FM LS L Y+ +L+NDP WK I VI SD+NVPGEGEHKI D+IR+QR QP HDP
Sbjct: 94 SFMCTLSKNLMLYVDRKLSNDPQWKNISVIFSDSNVPGEGEHKIADFIRQQRTQPCHDPV 153
Query: 226 TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPN 285
T+H +CG DADLI+LGLA+HE N T++R +PN
Sbjct: 154 TKHVICGNDADLILLGLASHETNVTLLR----------------------------GDPN 185
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
++IFV + +LRE L +E + PF Y ER +DDW+F+C +GNDFLP
Sbjct: 186 SR---------KWIFVGIHILRECLNEEFRGSDFPFDYHLERIVDDWIFLCILLGNDFLP 236
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK 389
+ + + LV + K K Q+ L NG VK
Sbjct: 237 SFQIFKNPDRTLTHLVRICKDAYNKNQDWL--THNGSINSVQVK 278
>gi|242218321|ref|XP_002474952.1| predicted protein [Postia placenta Mad-698-R]
gi|220725867|gb|EED79836.1| predicted protein [Postia placenta Mad-698-R]
Length = 253
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/229 (55%), Positives = 159/229 (69%), Gaps = 14/229 (6%)
Query: 32 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCTHPEDKPAP--KDEDEMMVAIFECIDRL 88
++ P S N + EFDNLY+D NGIIH C+HP D A E++M +IF +D L
Sbjct: 24 ERYPLTSQLIQENKIPEFDNLYVDFNGIIHNCSHPNDGDAHFRLSEEQMFTSIFAYVDHL 83
Query: 89 FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPP 148
F ++P+KL +MAIDGVAPRAKMNQQRSRRFR +KE E IREK G LP
Sbjct: 84 FGKIKPKKLFFMAIDGVAPRAKMNQQRSRRFRTAKEARE-------IREKAEQKGEKLPD 136
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
+K FDSNCITPGT FMA+LS L Y+I+ +++ D W+ I V+LS +VPGEGEHK
Sbjct: 137 QKA----FDSNCITPGTEFMAKLSEQLRYFINKKISEDSNWRDITVVLSGHDVPGEGEHK 192
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFK 257
+M+YIR RAQPD+DPN +HCL G DADLIMLGL +H+P+F ++REE K
Sbjct: 193 VMEYIRLSRAQPDYDPNVRHCLYGLDADLIMLGLLSHDPHFCLLREEVK 241
>gi|449689746|ref|XP_004212130.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 512
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/280 (48%), Positives = 174/280 (62%), Gaps = 38/280 (13%)
Query: 88 LFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILP 147
LFRI++P+K +MA+DG APRAKMNQQRSRRFR +KE I E + G LP
Sbjct: 45 LFRIIKPKKNFFMAVDGCAPRAKMNQQRSRRFRTAKEVGISI-------ENAIQRGETLP 97
Query: 148 PEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEH 207
KG FDSNCITPGT FM RL L Y+I+ +++ DP WK V S NVPGEGEH
Sbjct: 98 ----KGDSFDSNCITPGTEFMDRLHQQLKYFINYKISTDPLWKHCVVHFSGHNVPGEGEH 153
Query: 208 KIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVC 267
KIMDYIR +++PD+DPNT+HCL G DADLIMLGL+ HEP+F ++REE
Sbjct: 154 KIMDYIRYCKSKPDYDPNTRHCLYGLDADLIMLGLSVHEPHFCLLREE------------ 201
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSF 325
V A+ N V++ G +V F + LS+LREYL+ E + +L F Y
Sbjct: 202 ----------VRFGAKSN--IVLSPGDQV-FHLLHLSLLREYLDLEFSSMKESLEFEYDL 248
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYK 365
E+ +DDW+F+ F VGNDF+PHLP + I A+ ++YK
Sbjct: 249 EKIIDDWIFLGFLVGNDFVPHLPHMHINHDALPYFYSVYK 288
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 416 KDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
K YY KF + K++I + + + YV L W+ YY+ G +SW WY+P+HY+P+ SD
Sbjct: 415 KQNYYAEKFGMNVKNNIEMQTICSN-YVTALQWISHYYFNGLQSWSWYYPYHYSPYMSDL 473
Query: 475 INIAEVDTNFETGT 488
+ + + GT
Sbjct: 474 ASFELEKISMDLGT 487
>gi|428182412|gb|EKX51273.1| hypothetical protein GUITHDRAFT_157234 [Guillardia theta CCMP2712]
Length = 252
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 167/262 (63%), Gaps = 31/262 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRWLS +YP + Q I + P EFDNLYLDMNGIIH
Sbjct: 1 MGIPKFFRWLSERYPLI-------------NQDIKAGTIFP-----EFDNLYLDMNGIIH 42
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
PCTH D + E++M VAI + +D L ++VRP++LL++A+DG APRAKMNQQR RRF
Sbjct: 43 PCTHGNDGEVVRMTENDMFVAIGKFVDELMKVVRPQRLLFLAVDGCAPRAKMNQQRQRRF 102
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
RA+ E ++ + E++ D FDSNCITPGT FMARL+ L+Y+I
Sbjct: 103 RAASELSKSLMNARERGEEIPQDP------------FDSNCITPGTQFMARLTNFLNYFI 150
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++ +DP W K+ILS A VPGEGEHKIM+YIR++++Q N +HC+ G DADLIM
Sbjct: 151 QSKIKDDPIWAKAKIILSGAEVPGEGEHKIMEYIRREKSQESWPSNLRHCIFGNDADLIM 210
Query: 240 LGLATHEPNFTIIREEFKPNQA 261
L LATHEP+F ++RE + Q
Sbjct: 211 LSLATHEPHFALLRETYDAQQG 232
>gi|241602466|ref|XP_002405190.1| pacman protein, putative [Ixodes scapularis]
gi|215500574|gb|EEC10068.1| pacman protein, putative [Ixodes scapularis]
Length = 1112
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 169/280 (60%), Gaps = 44/280 (15%)
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEK 150
+++PRK +MA+DGVAPRAKMNQQR RRFR++KE + ++ L+ G +LP E
Sbjct: 1 MIKPRKTFFMAVDGVAPRAKMNQQRGRRFRSAKEALA-------LEKQALSRGEVLPTE- 52
Query: 151 EKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIM 210
+ FDSNCI+PGT FMA L L ++ ++++DP W+ +KV LS PGEGEHKIM
Sbjct: 53 ---ARFDSNCISPGTSFMANLQEQLEQFVAMKISSDPLWQEVKVYLSGHQTPGEGEHKIM 109
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF----KPNQARPCDV 266
D+IR +R++P +DPNT+HCL G DADLIMLG +HEP+F ++REE K NQ R
Sbjct: 110 DFIRTERSKPGYDPNTRHCLYGLDADLIMLGTCSHEPHFALLREEIVYGKKQNQKR---- 165
Query: 267 CGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL--AMPNLPFPYS 324
+ E+ F + LS+LREYL E +LPF +S
Sbjct: 166 -----------------------LNVPEEITFHLLHLSLLREYLSYEFQAVKDSLPFEFS 202
Query: 325 FERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
E +DDWV MCF VGNDFLPHLP+L I A+ L Y
Sbjct: 203 LESLVDDWVLMCFLVGNDFLPHLPNLHIAHNALPILYQAY 242
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 387 GVKRSFDDVD----ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYV 442
G+ F +D ES EE E E+ + K YY +K + + H YV
Sbjct: 330 GLLEKFSHLDIPDYESDEESEGTLEMEFRQ--HKRDYYTTKLEYKDVNKEVMQEQAHGYV 387
Query: 443 LGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+ W L YYY G +SW WY+P HY+P+ SD + +D +FE G
Sbjct: 388 RAIQWNLHYYYNGVQSWNWYYPHHYSPYISDIKDFQSIDMSFELG 432
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++SP++D+YP+DF DLNGK+ W+ V L+PF+DE+RL + KL+ EE E
Sbjct: 464 EESPVLDYYPQDFTTDLNGKQQEWEAVVLIPFIDEDRLLPVMQELDSKLTDEERE 518
>gi|303285348|ref|XP_003061964.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456375|gb|EEH53676.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/259 (50%), Positives = 159/259 (61%), Gaps = 32/259 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWLS +YP + C +P DNLYLDMNG+IH
Sbjct: 1 MGVPKFYRWLSERYPLLNHTC--------GAGTVPI-----------IDNLYLDMNGVIH 41
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+H D EDEMM +F +D +FR+VRPR+LLYMAIDGVAPRAKMNQQRSRR
Sbjct: 42 NCSHGAGTDINTRMTEDEMMAKVFAYLDHIFRMVRPRRLLYMAIDGVAPRAKMNQQRSRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR++ E + +E+ +A G P G FDSNCITPGTPFMARLS L +Y
Sbjct: 102 FRSA-------LEAKKAKEEAIAKGEPEP----SGEPFDSNCITPGTPFMARLSEHLRFY 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ + DP W+ VILS V GEGEHKIM++IR R +P DPN HCL G DADLI
Sbjct: 151 VMKKQTEDPQWQKATVILSGHEVRGEGEHKIMEHIRWARGEPGWDPNQTHCLYGLDADLI 210
Query: 239 MLGLATHEPNFTIIREEFK 257
ML L THEP+F ++RE K
Sbjct: 211 MLALVTHEPHFCLLREVVK 229
>gi|351706558|gb|EHB09477.1| 5'-3' exoribonuclease 2 [Heterocephalus glaber]
Length = 176
Score = 244 bits (624), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 136/177 (76%), Gaps = 1/177 (0%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFF WLS KY S+IV+CVE+KP + NG KIP D+SKPNPN +EFD LYLDMNGIIH
Sbjct: 1 MGVPAFFCWLSSKYLSIIVNCVEEKPPKCNGIKIPVDASKPNPNDVEFDKLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPEDKP K E+EMMVAIFE +D LF IVR R+LLYMAIDGVAPRAKMNQQ SRRFR
Sbjct: 61 PCTHPEDKPTSKKEEEMMVAIFEYLDGLFNIVRARRLLYMAIDGVAPRAKMNQQLSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
ASKE E E +RE+ LA G LPPE+ K FDS C TPGT FM L+ L Y
Sbjct: 121 ASKEGMEAAMEKQHVREETLAKGGYLPPEQIK-ERFDSYCTTPGTEFMDNLAKSLCY 176
>gi|357472639|ref|XP_003606604.1| 5'-3' exoribonuclease [Medicago truncatula]
gi|355507659|gb|AES88801.1| 5'-3' exoribonuclease [Medicago truncatula]
Length = 909
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/245 (53%), Positives = 157/245 (64%), Gaps = 6/245 (2%)
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
MA LS L YYIH RLNNDPGWK IKVILSDANVPGEGEHKI YIR QR +DPNTQ
Sbjct: 1 MAVLSVALQYYIHLRLNNDPGWKNIKVILSDANVPGEGEHKITSYIRLQRNLKGYDPNTQ 60
Query: 228 HCLCGADADLIMLGLATHEPNFTIIRE-EFKPNQARPCDVCGQMGHEMKECVG-LDAEPN 285
HCL G DADLIMLGLATHE +F+I+RE F P Q + C +CGQMGH EC G + +
Sbjct: 61 HCLYGLDADLIMLGLATHEIHFSILREVVFTPGQDK-CFLCGQMGHMAAECEGKAKRKTD 119
Query: 286 PESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLP 345
E +++ F F+ + LREYLE E+ +PN PF FE LDD++F+CFFVGNDFLP
Sbjct: 120 DEKGDAIVAKLPFQFLNIWTLREYLEYEMRIPNSPFEIDFECILDDFIFICFFVGNDFLP 179
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN 405
H+P+L+IREGA+D L+ +YK K L NG F S E+E
Sbjct: 180 HMPTLDIREGAIDSLMTVYKNEFTKLGGYL---TNGSKPNLSRVEHFIQAVGSHEDEIFQ 236
Query: 406 DEVRL 410
RL
Sbjct: 237 KRARL 241
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 392 FDDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVL 449
D D + + D+++L E G+K+RYYE KF P++ +A R V +Y GLCWV+
Sbjct: 346 LDKSDVFNSKGGHEDKIKLGEPGWKERYYEEKFSAKTPEELVAIRKDVVLKYTEGLCWVM 405
Query: 450 KYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
YYY+G SW+W++P+HYAPFASD ++E++ NFE G
Sbjct: 406 HYYYEGVCSWQWFYPYHYAPFASDLKGLSELNINFELGA 444
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGK+FAWQG+A LPF+DE RL A+ L+ EE
Sbjct: 477 SPIIDFYPIDFEVDMNGKRFAWQGIAKLPFIDETRLLAAVQKIENFLTPEE 527
>gi|328854884|gb|EGG04014.1| hypothetical protein MELLADRAFT_28527 [Melampsora larici-populina
98AG31]
Length = 206
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 155/216 (71%), Gaps = 13/216 (6%)
Query: 49 DNLYLDMNGIIHPCTHP--EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 106
DNLYLDMNGIIH C+HP ED E+++ +AIF ++ LF +V+P+KL +MA+DGVA
Sbjct: 1 DNLYLDMNGIIHNCSHPNEEDAHFRITEEQIFLAIFGYLEHLFALVKPQKLFFMAVDGVA 60
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
PRAKMNQQRSRRFR +K+ + I + R E L P E FDSNCITPGTP
Sbjct: 61 PRAKMNQQRSRRFRTAKDRKDMIDKAERKGETL--------PSTEA---FDSNCITPGTP 109
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT 226
FMARLS L Y+I+ +++ D W+G++V+ S +VPGEGEHKIM+YIR +AQPD++PN
Sbjct: 110 FMARLSEQLKYFINQKVSTDSAWQGVQVVFSGHDVPGEGEHKIMEYIRLAKAQPDYNPNV 169
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREEFKPNQAR 262
+HCL G DADLIML L +H+P+F ++REE K AR
Sbjct: 170 RHCLYGLDADLIMLALLSHDPHFCLLREEVKFGPAR 205
>gi|84995660|ref|XP_952552.1| 5'-3' exoribonuclease 2 [Theileria annulata strain Ankara]
gi|65302713|emb|CAI74820.1| 5'-3' exoribonuclease 2, putative [Theileria annulata]
Length = 1467
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 219/400 (54%), Gaps = 61/400 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVH---CVEDKPQEVNGQKIP------FDSSKPN---PNGMEF 48
MG+P+FFRWL+ +YP + DK K P F++ N P+G F
Sbjct: 1 MGIPSFFRWLAERYPLICESQDVSTADKGDAFMLLKNPESFRDKFENLNLNLTPPDG--F 58
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 106
DNLYLD+NGI+H C+H ED++ V+IF+CI + IVRP+KLLY+A+DGVA
Sbjct: 59 DNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIINIVNIVRPKKLLYLAVDGVA 118
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
PRAK+ QQR RRFRA+ E+ ++ + +++ + EKE+ FD ITPGT
Sbjct: 119 PRAKIIQQRERRFRAAMESTQQQIILDSLKDMENGEESADLNEKEEEFKFDPIQITPGTA 178
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA-------- 218
FM RL++ L ++ +N + W+ +K+++S ++VPGEGEHKIM+YIR +A
Sbjct: 179 FMERLTSRLQFFALKMINENQQWRNLKIVVSGSDVPGEGEHKIMEYIRNDKAIRHAEYEK 238
Query: 219 -------QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQM- 270
+ P HC+ G DADLI+L LATHEP ++RE+ V G M
Sbjct: 239 MIRNGNKEKKGVPYVSHCVYGLDADLIVLSLATHEPYICLLREQV---------VFGHMK 289
Query: 271 -GHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSF---E 326
+M+ V ++ +I + + +LREYL +L + +L +
Sbjct: 290 NSSKMRMMVNMN---------------NYILLHIGILREYLVADL-VEDLRLRSDLNVMD 333
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
R +DD+VF+ FVGNDFLPH+ I EG + ++ +Y++
Sbjct: 334 RVVDDFVFLTMFVGNDFLPHIHMANIPEGGFNHMLQIYRE 373
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 415 FKDRYYESKFDVPKDDIAFRLM-------VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
+++RYY +K + I V EY+ G+ W+L YYY+G SW W+ P Y
Sbjct: 510 YRNRYYLAKMGISNQLIKCNEGSVNSVEDVVREYLHGVQWILYYYYRGVPSWNWHLPCKY 569
Query: 468 APFASDFI 475
PF +D +
Sbjct: 570 PPFVNDML 577
>gi|170119902|ref|XP_001891045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164633808|gb|EDQ98306.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 345
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 193/342 (56%), Gaps = 50/342 (14%)
Query: 32 QKIPFDSSKPNPNGM-EFDNLYLDMNGIIHPCT--HPEDKPAPKDEDEMMVAIFECIDRL 88
++ P S N + EFDNLYLD NGIIH C+ + ED E+++ IF +D L
Sbjct: 3 ERYPLTSELIQENKIPEFDNLYLDFNGIIHNCSRLNDEDTHFRLTEEQIFTLIFTYVDHL 62
Query: 89 FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPP 148
F ++ +KL ++A+DGVAPRAKMNQQRSRRFR +KE A+V +REK G LP
Sbjct: 63 FGKIKLKKLFFVAVDGVAPRAKMNQQRSRRFRTAKE-----AKV--VREKAELKGEKLPM 115
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
EK FDSNCI P L Y+IH +++ D W+ +KV+LS VPGEGEHK
Sbjct: 116 EKA----FDSNCIAPVNTIYGTFIDQLRYFIHKKISEDSNWREVKVVLSGREVPGEGEHK 171
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCG 268
IM+YIR RAQP ++PN +HCL G DADLIMLGL +H+P+ ++REE K A
Sbjct: 172 IMEYIRLSRAQPGYNPNIRHCLYGLDADLIMLGLLSHDPHLCLLREEVKFGPAS------ 225
Query: 269 QMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPN--LPFPYSFE 326
K L++ V F + LS++REYL+ E LPF Y+ +
Sbjct: 226 ----RKKWNTSLES-------------VNFYLLHLSLMREYLDLEFHEIQLMLPFDYNLK 268
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
R +D DFLP LP L I E +++L ++YKK +
Sbjct: 269 RVID-----------DFLPDLPDLHIHENGLEKLFDVYKKVL 299
>gi|300706190|ref|XP_002995390.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
gi|239604457|gb|EEQ81719.1| hypothetical protein NCER_101741 [Nosema ceranae BRL01]
Length = 616
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 243/505 (48%), Gaps = 64/505 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++K+P C+ KP E + D LY+D N IIH
Sbjct: 1 MGVPILFSWLNKKFPD----CITQKPPE------------------QVDILYIDYNAIIH 38
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
C +P K ++M+ + + +D + +PRK+LY+A+DGVAP AK+ QR RR++
Sbjct: 39 NCYNPNLGSLDKIYEDMIDRLTKMVDNIVEKAKPRKILYIAVDGVAPAAKLAHQRGRRYK 98
Query: 121 ASKETA--EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
A+ E A + + E +G L + + FDSN ITPGT M L +
Sbjct: 99 AASEKAGPNGYIDFSSNVEITTQEGA-LTSKPPTANIFDSNSITPGTELMKFLHKNIIDM 157
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ LN +P +K +K++ S VPGEGE KIM ++RK +P H + D D+I
Sbjct: 158 LIYNLNTNPNYKDLKILYSSYLVPGEGEQKIMAFLRKYHLS---NPKDTHVMYSPDGDII 214
Query: 239 MLGLATHEPNFTIIREEF--KPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LG++ ++ N I+RE+ N+ C +C +MGH ++C P+ +I S +
Sbjct: 215 FLGVSLYDVNLYIMREDTFNSKNKKEICRMCSRMGHFSEQC------NRPDLLIY--SYI 266
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ R S+L+ + N+ Y +R L DWV +CF +GNDFLP +P ++I+ G+
Sbjct: 267 DVPKFRASLLKIF--------NIKIEYVEKRMLTDWVLVCFLLGNDFLPGIPCVDIKIGS 318
Query: 357 VDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESND---------- 406
++ L + ++ + E+ + F + + E + N+
Sbjct: 319 IENLTSTLCDNFTNCKDYITTEDKNINF--KILECFFVLLSTRENDWYNNKTKMLNRSCN 376
Query: 407 ----EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
E++L + +YY SKF + A + EY+ G+ W YY G SW W
Sbjct: 377 FIREEIQLNTPQGRQKYYNSKFGAHCE--ADFNNISQEYITGILWTFNYYIGGKTSWDWV 434
Query: 463 FPFHYAPFASDFINIAEVDTNFETG 487
+P+H+APF D +N+ + + G
Sbjct: 435 YPYHFAPFVRDLVNVVRAHYDLKKG 459
>gi|393910763|gb|EJD76028.1| hypothetical protein LOAG_16951 [Loa loa]
Length = 159
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/153 (71%), Positives = 129/153 (84%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+RKYPSVIV VE+KP+++NG +IP ++ PNPN EFDNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLTRKYPSVIVDAVEEKPRDMNGVRIPVNTVDPNPNFQEFDNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PCTHPED+P+PK E+EM IFE IDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
Sbjct: 61 PCTHPEDRPSPKTEEEMFTLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKG 153
ASKE EK+ ++A R +L ++G LPPEK++
Sbjct: 121 ASKEAIEKVEQIAETRSRLESEGYPLPPEKKRS 153
>gi|145515211|ref|XP_001443505.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410894|emb|CAK76108.1| unnamed protein product [Paramecium tetraurelia]
Length = 1303
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 256/525 (48%), Gaps = 115/525 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+ WL R++P + + Q++ D YLDMN II+
Sbjct: 1 MGVPNFYSWLMRRFPLCLY-------EHTRAQRV--------------DYFYLDMNQIIY 39
Query: 61 PC-THP----EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
C T P +D+ +D D++ V+I +D + +V P++LL++A DGVAPRAKMNQQR
Sbjct: 40 KCATDPTVLFKDQLRERDFDDIWVSILNYLDMIINLVNPQQLLFLAFDGVAPRAKMNQQR 99
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RRF++ K A + +I G +K + +N +PGT FM +L+ +
Sbjct: 100 QRRFQSQKRYKYLSAHLQQI-------GLF-----QKNETYKNNQFSPGTEFMTQLNQQI 147
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
+YI + + DP +K +K+I S +VPGEGEHK++ +IR + DPN+ H + GADA
Sbjct: 148 KFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFIRNLQC----DPNSVHMIYGADA 203
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIMLGL T N IIRE+ K Q A V+
Sbjct: 204 DLIMLGLLTQLKNVLIIREDLKFKQT--------------------ASAAANRVVKIP-- 241
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
EF+ + +S++REYL+ E A+ + PY R +DD++ +CFFVGNDFLP + +IR
Sbjct: 242 -EFLVINISIVREYLDLEFAVLKDKMKVPYDINRIIDDFILLCFFVGNDFLPRIFCFDIR 300
Query: 354 EGAVDRLVNLYKKTVYKTQEQL----------------------------RQEE-----N 380
G ++ LV+L+K + + L RQ+E N
Sbjct: 301 IGTIEPLVDLFKNHLTNANDYLVHRGDINYKELISLLDLLQGFEKLCINDRQQEMLNYLN 360
Query: 381 GGGGGRGV----KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
R V K D++ + +E + + YY++K + KDD
Sbjct: 361 TKHQNRQVIAKEKELIDNILKYFSLQEQTEGRKF--------YYKAKCQITKDDELDLDK 412
Query: 437 VGH---EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIA 478
+G Y+ G+ +VL+YY++G SW+WY+ ++YAP D + +
Sbjct: 413 LGDMCVNYMEGIYFVLQYYFKGVPSWEWYYKYYYAPLCGDLVGVV 457
>gi|429962361|gb|ELA41905.1| hypothetical protein VICG_01089 [Vittaforma corneae ATCC 50505]
Length = 630
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 251/531 (47%), Gaps = 105/531 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME---FDNLYLDMNG 57
MGVP+ ++W++++YP V K PN E DNLYLD N
Sbjct: 1 MGVPSLYKWITQRYPEV----------------------KLKPNREEDHLTDNLYLDFNA 38
Query: 58 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IIHPC + + + E+ + + +D + +RPR+LLY+++DGVAPRAK+NQQRSR
Sbjct: 39 IIHPCCNKALENMADTDTELYKNLEKYMDEVIARIRPRRLLYISVDGVAPRAKLNQQRSR 98
Query: 118 RFRASKETAEK------------IAEVAR--IREKLLADGCILPPEKEKGSH-----FDS 158
RF ++E +E+ A +R + ++ + + + ++ + FD+
Sbjct: 99 RFVHAREVSEQGNFYFKDDCGNEPAHHSRLTVLDQEIENSAVSKNMSDEATPNGCGVFDT 158
Query: 159 NCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA 218
N I+PGT FM RL A L I +++ D W G VI S VPGEGE KIM+YIRK +
Sbjct: 159 NAISPGTEFMQRLDAFLQELISFKMSFDQRWTGFNVIYSSYRVPGEGEQKIMEYIRKHQ- 217
Query: 219 QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECV 278
+P + DADLI LGL+ + + ++REE P
Sbjct: 218 ----NPKFSSVIFSPDADLIFLGLSLFDHSVMVLREE-PPKHG----------------- 255
Query: 279 GLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFF 338
S + +E +F+ V + L+ + ++ + P++ + L+DW+F+CF
Sbjct: 256 --------NSNGSLSNEKDFVLVDIPRLKHLIIRDFKYV-MKMPFNHRKFLEDWIFLCFT 306
Query: 339 VGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDES 398
VGNDFLP P EIR A+D+L ++ + T+ + + G V R F E
Sbjct: 307 VGNDFLPCTPCFEIRTDALDKLTHILQTVYLNTRSFI---TDNGKINYDVLREF--FIEC 361
Query: 399 SEEEES----------------------NDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
+ E + ++E L + K R+Y K + + L+
Sbjct: 362 ARRENTFIVEKRNNLVNVRQRMNLPYDPSEEFFLETERGKIRFYVEKMGITSEKDL--LI 419
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
EY+ GL WV YY+ SW+WY+P+H+APF +D + +V F TG
Sbjct: 420 ACEEYIKGLEWVYNYYFYDMPSWEWYYPYHFAPFMTDLALVKDVKFKFTTG 470
Score = 38.9 bits (89), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 670 DFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++YP +FK+D+ K WQ V +LPF++ + L KA +L E E
Sbjct: 504 EYYPTEFKLDMFQKCMDWQAVPILPFINVQDLIKAFENRQNELKFSECE 552
>gi|449687936|ref|XP_002167193.2| PREDICTED: 5'-3' exoribonuclease 1, partial [Hydra magnipapillata]
Length = 487
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/286 (45%), Positives = 172/286 (60%), Gaps = 42/286 (14%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSN 159
MA+DG APRAKMNQQRSRRFR +KE E I K + G LPP+ FDSN
Sbjct: 1 MAVDGCAPRAKMNQQRSRRFRTAKEAEEAI-------RKAIQKGQTLPPD----DRFDSN 49
Query: 160 CITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
CITPGT FM RL L Y+++ ++++DP W+ + LS +VPGEGEHK+MD+IR +++
Sbjct: 50 CITPGTEFMWRLQHQLKYFVNQKISSDPLWQECTIYLSGHDVPGEGEHKVMDFIRYCKSK 109
Query: 220 PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVG 279
PD+DPNT+HCL G DADLIMLGL+THEP+F+++REE + G + K +
Sbjct: 110 PDYDPNTRHCLYGLDADLIMLGLSTHEPHFSLLREEIR------------YGKQSKRLLR 157
Query: 280 LDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPN--LPFPYSFERALDDWVFMCF 337
D E F + LS+LREYLE E + L F + ER +DDW+F+ F
Sbjct: 158 PD-------------EQTFHLLHLSLLREYLEMEFIIVKDLLHFRFDTERIIDDWIFLGF 204
Query: 338 FVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGG 383
VGNDF+PHLP + I A+ + +YK+ + T L N GG
Sbjct: 205 LVGNDFVPHLPHMHINHDALPYIFKIYKEFLPTTDGYL----NDGG 246
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%)
Query: 401 EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWK 460
E E ++ L K YY KFD+ D + EYV+ L W+ YY+ G +SW
Sbjct: 358 EVEDDETFELEFQQHKRHYYMEKFDMDIADNEHIQTICTEYVIALQWISHYYFNGLQSWS 417
Query: 461 WYFPFHYAPFASDFINIAEVDTNFETG 487
WY+P+HY+P+ SD N + NFE G
Sbjct: 418 WYYPYHYSPYISDVANFELKEINFEMG 444
>gi|71415930|ref|XP_810014.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874484|gb|EAN88163.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 266
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 165/265 (62%), Gaps = 35/265 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ + P+VI PF S P DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERCPTVIT---------------PFRDSPP-----PVDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPKD---EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D A + E MM A+F +++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E+ R++ +A G +P EK+ FDSNCITPGT FM R+S Y
Sbjct: 101 RYRSG-------YELMVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I ++ DP W+ +V+ S + PGEGEHKI+D+IR+++ QP + PN HC+ G DADL
Sbjct: 151 FITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE--EFKPNQ 260
+ML LATHEP+F ++RE F P Q
Sbjct: 211 VMLSLATHEPHFLLLREVVTFGPGQ 235
>gi|167516040|ref|XP_001742361.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778985|gb|EDQ92599.1| predicted protein [Monosiga brevicollis MX1]
Length = 290
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/259 (49%), Positives = 161/259 (62%), Gaps = 38/259 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+ L +YP+ I+ E+ P EFDN YLD NGI+H
Sbjct: 1 MGVPRLFKLLVERYPA-ILRGTEEHPMP------------------EFDNFYLDFNGIVH 41
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH + K +MM+AIF I LF I+RP++LLY+AIDGVAPRAKM QQR R
Sbjct: 42 NCTHGNEGDVRKSSQVTQDMMMAIFHEIQTLFDIIRPQRLLYIAIDGVAPRAKMQQQRQR 101
Query: 118 RFRASK--ETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RF+A++ E A++I V + PP E+ HFDSNCITPGT FM L L
Sbjct: 102 RFKATRDSEAAQQITAV------------VAPPMPEE--HFDSNCITPGTEFMDLLQRHL 147
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
Y+I +L D W+ ++V+LS VPGEGEHKIMD+IR ++QP +DPNT+HCL G DA
Sbjct: 148 VYFIQRKLEEDDDWRKVEVVLSGHQVPGEGEHKIMDFIRSLKSQPAYDPNTRHCLHGLDA 207
Query: 236 DLIMLGLATHEPNFTIIRE 254
DLIML LATHEP+F I+RE
Sbjct: 208 DLIMLALATHEPHFAILRE 226
>gi|71416427|ref|XP_810246.1| 5'-3' exonuclease XRNA [Trypanosoma cruzi strain CL Brener]
gi|70874749|gb|EAN88395.1| 5'-3' exonuclease XRNA, putative [Trypanosoma cruzi]
Length = 230
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 120/257 (46%), Positives = 162/257 (63%), Gaps = 33/257 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW++ + P+VI PF S P DNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWVAERCPTVIT---------------PFRDSPP-----PVDNLYLDMNGIIH 40
Query: 61 PCTHPEDKPAPK---DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
CTH D A + E MM A+F +++LF +++PRK ++A+DGVAPRAKMNQQR R
Sbjct: 41 NCTHTNDVDATQKSPTEKAMMEAMFAYLEKLFNVIQPRKYFFLAVDGVAPRAKMNQQRQR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R+ E+ R++ +A G +P EK+ FDSNCITPGT FM R+S Y
Sbjct: 101 RYRSG-------YELMVARQEAIAQGEEVPDEKDV---FDSNCITPGTNFMVRVSEQFQY 150
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I ++ DP W+ +V+ S + PGEGEHKI+D+IR+++ QP + PN HC+ G DADL
Sbjct: 151 FITMKIATDPAWQNCQVVYSGHDNPGEGEHKIVDFIRRRKMQPGYSPNETHCMYGLDADL 210
Query: 238 IMLGLATHEPNFTIIRE 254
+ML LATHEP+F ++RE
Sbjct: 211 VMLSLATHEPHFLLLRE 227
>gi|68070139|ref|XP_676981.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56496914|emb|CAH93788.1| conserved hypothetical protein [Plasmodium berghei]
Length = 635
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 262/566 (46%), Gaps = 138/566 (24%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
G+P ++WL+ YP+V + + +N GQK + D Y+DMNG+IH
Sbjct: 36 GIPRMYKWLTSYYPTV-------REELINYGQK------------KKVDIFYIDMNGVIH 76
Query: 61 PCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH P DE E+ I + LF +V+P+KL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 77 HCTHANKDALPIHDEHELFSNILHYLKNLFYLVKPQKLVYIGVDGVSPKAKMNQQRKRRF 136
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ KI + ++I + F+ NCIT GT FM +++ L+ +
Sbjct: 137 LS----LFKINDNSKI-----------------TNLFNPNCITTGTDFMYKINLSLNKWF 175
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+I S ++VPGEGEHKI+ +IR+ + N HC+ G DADLIM
Sbjct: 176 KILKKKKVF--NFDIIYSGSDVPGEGEHKILKFIRENCKNDSNFKNWNHCIYGLDADLIM 233
Query: 240 LGLATHEPNFTIIREEFK-PNQARPCDVCGQMGHEMKECVGLDAEPNPESV------ITF 292
L L TH N I+R++FK N + +V + +M+ +++E +P V I+
Sbjct: 234 LSLVTHLNNIFILRDKFKLTNDSMHNNVVNNI-EKMQSEFNVNSESDPNEVDNNEKEISI 292
Query: 293 GSEV------------------------------------------EFIFVRLSVLREYL 310
E+ +F + + LR +
Sbjct: 293 NRELKEIDKSEENKNMGNNESLNNCFNKTHKYTHDYYLHYDELNSYDFEILDIYKLRSSI 352
Query: 311 EKELAM--------PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVN 362
+ ++A N+ F S R +DD VF+ F VGNDFLPH+P+++I EG+++ ++N
Sbjct: 353 KTQIATYINKLKKEKNIIF--SINRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILN 410
Query: 363 LYKKTVYKTQEQ------------------LRQEENGGGGGRGVKRSFDDVDESSEEEES 404
Y +YK L +E RG+ +++ E ++E++
Sbjct: 411 SYIFYIYKYSNYITYKDKVHIERLKIILKILSGQEYQYFKKRGIN---ENIPEFTDEKK- 466
Query: 405 NDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFP 464
+K YY KF V D + +V +Y+ GL W L YY+ GC SW W +P
Sbjct: 467 ----------YKSYYYLHKFGVS-DSKQIQQIVK-KYIEGLFWNLHYYHFGCASWHWEYP 514
Query: 465 FHYAPFASDFINIAEVDTNFETGTQP 490
+HYAP SD ++ + D FE T P
Sbjct: 515 YHYAPLCSDLLSFEKSDFFFEKVTMP 540
>gi|118388580|ref|XP_001027386.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89309156|gb|EAS07144.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 1793
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 202/373 (54%), Gaps = 62/373 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+ WL+R+YP +I+H + K EV PN D YLDMNGII+
Sbjct: 1 MGVPGFYSWLARRYP-LILHQI--KKGEV-------------PN---IDCFYLDMNGIIY 41
Query: 61 PCTHPE-----DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
C+ E D ++ E+ IF ID + +V P+K+LY+ +DG PRAK NQQR
Sbjct: 42 KCSKDEGTVFKDLLLQRNIQEIFSMIFNYIDEMVNLVEPKKVLYLFLDGPCPRAKQNQQR 101
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
+RRF++++ + + + L G + +G +N I+ GT FM L+ L
Sbjct: 102 TRRFQSAQSWKD-------LNDSLRNCGFL-----SEGETMKNNSISTGTEFMHDLNKQL 149
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
H+YI + DP W ++V S +NVPGEGEHKI++++ + + D+DP T HC+ GADA
Sbjct: 150 HFYICKKFEQDPRWSNLEVFFSGSNVPGEGEHKIINFMHQYCSSQDYDPTTTHCIYGADA 209
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIMLGL+TH +I+REE K + V A+ + ESV
Sbjct: 210 DLIMLGLSTHIKYVSILREEMK----------------FQPPVSRAAKRDRESVT----- 248
Query: 296 VEFIFVRLSVLREYLEKELAM---PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
F + L+++REY+E E M ++ ER +DD++ +C F+GNDFLP L I
Sbjct: 249 --FQMIYLNIVREYMELEYKMLWKKVKKLEFNIERVIDDFLLICCFIGNDFLPRLYCFNI 306
Query: 353 REGAVDRLVNLYK 365
REG + L+ +YK
Sbjct: 307 REGQFEILIQIYK 319
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 416 KDRYYESKFDVPK---DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFAS 472
K YY+ K ++ DDI ++ +Y+ GL +VL YYYQGC SW WYFPF+YAP S
Sbjct: 501 KSYYYQQKLNLDFKNFDDIKTLDLLITKYLEGLQFVLLYYYQGCPSWSWYFPFYYAPMTS 560
Query: 473 DF 474
D
Sbjct: 561 DI 562
>gi|397617693|gb|EJK64564.1| hypothetical protein THAOC_14691, partial [Thalassiosira oceanica]
Length = 1534
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 168/493 (34%), Positives = 244/493 (49%), Gaps = 125/493 (25%)
Query: 1 MGVPAFFRWLSRKYPSV--IVHCV-------------------EDKPQ------EVNGQK 33
MGVP FFRWLS +YP + +HCV + +P E +G
Sbjct: 124 MGVPKFFRWLSERYPLINQPIHCVPREETKKAHGLLPSDANSSDGQPSTSSSGGEKDGAD 183
Query: 34 IPF------DSSKPN--PNGM-EFDNLYLDMNGIIHPCTHPE-----------------D 67
PF D+ K P+ M EFD LYLDMNGIIH +H D
Sbjct: 184 TPFPVEGKKDARKNTDIPHIMPEFDRLYLDMNGIIHCASHNNSEEEVEKQIDGKESTDTD 243
Query: 68 KP----APKDEDEMMVAIFECIDRLFR-IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRAS 122
+P + E+++ + +DR+ IV+P +L+++AIDGVAPRAK+NQQRSRR+R+
Sbjct: 244 RPRIVGSAITEEQIFQNVCYYLDRVISDIVQPTELVFLAIDGVAPRAKLNQQRSRRYRSG 303
Query: 123 --KETAEKIAEVARIREK-----------LLADGCIL----PPEKE---KGSH------- 155
+E + + R + + ADG P +++ +G+
Sbjct: 304 TEEEIEHHLMTLQRAKSSDHSDVDSAEYLIEADGGAFDGFWPMDRDDTARGAQRFSGKIE 363
Query: 156 ---------------------FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKV 194
F SN ITPGT F R S+ + +I ++L+ DP WK + +
Sbjct: 364 ATTDKSSSASVSVDQTPTVQGFHSNAITPGTLFFDRCSSRIIAFIREKLDTDPRWKNLTI 423
Query: 195 ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE 254
I S +VPGEGEHKIMD+IR ++ +P++DPN +HC+ G D DL+ML LATHEP+ ++RE
Sbjct: 424 IFSGHDVPGEGEHKIMDFIRHEKHKPEYDPNKKHCIYGQDGDLVMLSLATHEPHMCLLRE 483
Query: 255 EFKPNQARP--CDVCGQMGH-----EMKECVGLDAEPN-----PESVITFGSEVEFIFVR 302
E + AR + ++ H E + VG +E S+ ++ F +
Sbjct: 484 EVVFDMARRKVLERLAKVEHEKALDERAQDVGESSEGKSLPLLSPSIASYIHNANFELLH 543
Query: 303 LSVLREYL-----EKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+S+LR+YL +E N F E +DD+VFM FFVGNDFLPH+P+L+I + A
Sbjct: 544 VSLLRDYLGLEFETQEFYSKNSRF--KLEPTIDDFVFMTFFVGNDFLPHMPALDIGDEAF 601
Query: 358 DRLVNLYKKTVYK 370
D L YKK K
Sbjct: 602 DLLFYAYKKNRIK 614
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
K RYY KF + D + + EYV GL W L+YYY+GC SW W++P++Y P SD
Sbjct: 756 KGRYYYEKFGITPFDAEKHMTLRKEYVKGLVWTLEYYYKGCVSWDWFYPYNYGPMISDLT 815
Query: 476 NIAEV 480
N+ +
Sbjct: 816 NMNSI 820
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
+SP+ ++YPE F +D+NGK++ W+ V LLPF+D ++L +A
Sbjct: 878 ESPLKEYYPESFTVDMNGKRWPWEAVTLLPFIDADKLIEA 917
>gi|403221749|dbj|BAM39881.1| 5'-3' exoribonuclease 2 [Theileria orientalis strain Shintoku]
Length = 1374
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 203/395 (51%), Gaps = 79/395 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKI-------------PFDSSKPNPNGME 47
MG+P+FFRWL+ +YP + + + K+ P + +P P+G
Sbjct: 1 MGIPSFFRWLAERYPLICESQYVTTSDKGDAFKLLKSPETFKDSFNEPLFTYRP-PDG-- 57
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 105
FDNLYLD+NGI+H C+H ED++ V+IF+CI L IVRP+ LLY+A+DGV
Sbjct: 58 FDNLYLDVNGIVHNCSHSIADLCQNITSEDDIFVSIFQCIINLVNIVRPKSLLYLAVDGV 117
Query: 106 APRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGS-HFDSNCITPG 164
APRAK+ QQR RRFR++ E + + + E D E +K FD ITPG
Sbjct: 118 APRAKIIQQRERRFRSASEATIQQLILESLTELGDQDEDTQGEETQKEEFKFDPIQITPG 177
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRA------ 218
T FM RL+ L ++ +N + W+ +K+++S + VPGEGEHKIM+YIR +A
Sbjct: 178 TAFMERLTTRLQFFALKMINENELWRNLKIVVSGSEVPGEGEHKIMEYIRNDKARRHAEF 237
Query: 219 -------QPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMG 271
+P P+ HC+ G DADLI+L LATHEP ++RE+ V G M
Sbjct: 238 ESEVHRREPGDTPHISHCVYGLDADLIVLSLATHEPYICLLREQV---------VFGHMK 288
Query: 272 HEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDD 331
+ K LR M N+ Y +R +DD
Sbjct: 289 NSSK------------------------------LR-------MMVNMN-SYIMDRVVDD 310
Query: 332 WVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
+VF+ FFVGNDFLPHL I EG ++ L+ +Y++
Sbjct: 311 FVFLTFFVGNDFLPHLLLANIPEGGLNELLQIYRE 345
>gi|145506154|ref|XP_001439043.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406216|emb|CAK71646.1| unnamed protein product [Paramecium tetraurelia]
Length = 1199
Score = 225 bits (574), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 255/516 (49%), Gaps = 96/516 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+ WLS++YP K PF +G + D LYLDMN +I+
Sbjct: 1 MGVPNFYSWLSKRYPMC---------------KYPFTKH----HGHQIDFLYLDMNQVIY 41
Query: 61 PC----THPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
C T +D K + + +I ID + +V P+ ++Y+ DGVAPRAK NQQR
Sbjct: 42 KCATNQTILKDYMIEKSIESLWTSILNYIDTIINLVDPQLVIYLTFDGVAPRAKANQQRQ 101
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-FDSNCITPGTPFMARLSACL 175
RRF +SK A+ + ++ ++L + E+ +H F +N IT GT FM L+ +
Sbjct: 102 RRFASSKGDAK----IKQLLKQL---------DLEQQNHTFKNNQITAGTEFMYELNEQV 148
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
++I+ + D + ++VI S ++VPGEGEHKI++++R + Q + +P+ HC+ ADA
Sbjct: 149 KFFINRKFKEDEKYANLQVIFSGSDVPGEGEHKILEFMRGIKNQQNFNPDWTHCIYSADA 208
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIMLGL H +IIRE+ +Q + C + S+ T
Sbjct: 209 DLIMLGLGIHLKYVSIIREQSNMDQIKTQIACKR------------------SIET---- 246
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
V+F + L +++EYL+ E + PY+ +R +DD++ + F +GNDFLP + +I++G
Sbjct: 247 VKFELINLQIVKEYLDLEYKTIQMKIPYNIDRVIDDFLLLFFLIGNDFLPRVYCFDIKQG 306
Query: 356 AVDRLVNLYKKTVYKTQEQLRQEENGGGGG-------------RGVKRSFDDVDES---S 399
V+ L++ +K + + E + Q+ + +++ +++ + +
Sbjct: 307 TVELLIDTFKSFLEQCDEYVTQDGWINWKSMSLLVQVLSKFEIKAIEKRVEELKKQIKDT 366
Query: 400 EEEESNDEVRLWEDGFK------------------DRYYESK--FDVPKDDIAFRL-MVG 438
+ E D WE K +YESK D+ ++ L +
Sbjct: 367 DNPEYQDYKIQWESELKILDALNIQFSNNNSVVARKLFYESKCQIDIDTEEGKKELDKII 426
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
+Y+ G +VL YYY G SW+WY+ ++Y+P D
Sbjct: 427 LKYLEGFQFVLSYYYHGVPSWEWYYSYYYSPMCFDL 462
>gi|188501630|gb|ACD54753.1| 5-3 exoribonuclease 2 isoform 9-like protein [Adineta vaga]
Length = 510
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 221/480 (46%), Gaps = 115/480 (23%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MN II+ C + +D K EDE++ +FE ID +F I+ PR L+YM+IDGVAP+AKM+Q+
Sbjct: 1 MNEIIYLCANLDDLSTLKSEDEIIQGVFEYIDEIFSIIHPRNLIYMSIDGVAPKAKMHQE 60
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
R + +K+ + F I PGT FM++LS
Sbjct: 61 RVSLYNYAKKHSSD------------------------NEQFTKCDIKPGTMFMSKLSDK 96
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L YIHDR+N+ P WK I VILSDANVPGEGEHK MD+IR Q+ + NT H L D
Sbjct: 97 LRSYIHDRMNSIPAWKSIIVILSDANVPGEGEHKTMDFIRSQKFS---NSNTNHVLFSGD 153
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
+D+++LGL N I+R + T
Sbjct: 154 SDMVLLGLTMPSDNVRIMRRK-----------------------------------TNKI 178
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
EV + F L +LRE ++ E F + +DDW+F+C GNDFLP+LPS+E +
Sbjct: 179 EV-YTFRDLKLLREEIKNE-------FIGDLKSIIDDWIFLCLLAGNDFLPNLPSIEFNQ 230
Query: 355 GAVDRLV-NLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEE----------- 402
++ ++ + YK+ + K L EN K + E E++
Sbjct: 231 TEINNVIFDTYKEYIRKKDVYLI--ENMEPNLEYFKILLKHIGEIEEDKVMSLLERSQTA 288
Query: 403 --ESNDEVRLWE----------------------------DGFKDRYYESKFDVPKDDIA 432
S DE+R E ++ +YY+ KF D +
Sbjct: 289 TNYSLDEIRKQEPITNPSAIRFAPPSFQKSRNPTSSTESATHWQRQYYKDKFGFKGDQLK 348
Query: 433 FRLM-VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPV 491
+ V Y GLCWVL YYY+G SW WY+ ++Y P AS F N+ + NF ++P+
Sbjct: 349 TKSTEVVQHYAEGLCWVLHYYYKGVPSWDWYYSYYYPPLASTFSNLENIPMNFNRNSKPL 408
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
S IIDFY D ID +GK++ Q + LPFVDE+ L +AL LS EE
Sbjct: 439 SSIIDFYRSDPAIDAHGKRYEEQYIVKLPFVDEKCLFEALKSIDSTLSKEE 489
>gi|367024791|ref|XP_003661680.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
gi|347008948|gb|AEO56435.1| hypothetical protein MYCTH_92876 [Myceliophthora thermophila ATCC
42464]
Length = 1055
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 161/259 (62%), Gaps = 37/259 (14%)
Query: 55 MNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
MNGIIH CTH +D E+EM +AIF I+ LF ++P+KL +MA+DGVAPRAKMN
Sbjct: 1 MNGIIHNCTHKDSDDVHFRLTEEEMFIAIFNYIEHLFSKIKPKKLFFMAVDGVAPRAKMN 60
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
QQR+RRFR + + AEK REK + +G LP E+ FDSNCITPGT FMA+LS
Sbjct: 61 QQRARRFRTALD-AEKA------REKAIREGKELPKEEP----FDSNCITPGTEFMAKLS 109
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L Y+I+ +++ D W+ +++LS VPGEGEHKIM+YIR RAQPD+ PN +HCL G
Sbjct: 110 QQLKYFINKKVSEDRAWQQPEIVLSGHEVPGEGEHKIMEYIRNARAQPDYSPNVRHCLYG 169
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADLIMLGL +H+P+F ++REE + Q H+ KE
Sbjct: 170 LDADLIMLGLLSHDPHFCLLREEVTFGR--------QAKHKSKEL--------------- 206
Query: 293 GSEVEFIFVRLSVLREYLE 311
F + L ++REYLE
Sbjct: 207 -EHQNFYLLHLCIVREYLE 224
>gi|238878282|gb|EEQ41920.1| 5'-3' exoribonuclease 1 [Candida albicans WO-1]
Length = 1422
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 171/287 (59%), Gaps = 45/287 (15%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSN 159
MAIDGVAPRAKMNQQR+RRFR + E AE+ +K + +G +P E FDSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYE-----AEINL--KKAIENGEEIPKE----DPFDSN 49
Query: 160 CITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
ITPGT FMA+L+ L Y+IH ++ D W I++ILS VPGEGEHKIM+YIR R+Q
Sbjct: 50 SITPGTEFMAKLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQ 109
Query: 220 PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPN-QARPCDVCGQMGHEMKE 276
D++PN +HC+ G DADLIMLGL TH+P+F ++REE F P + P D+ Q
Sbjct: 110 DDYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDLHDQ------- 162
Query: 277 CVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVF 334
+F + LS+LREYL E L F Y F+R LDD++
Sbjct: 163 --------------------KFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFIL 202
Query: 335 MCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
+ + +GNDFLP+LP L I +GA L+ +K+T+ ++ + ENG
Sbjct: 203 IMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYIN--ENG 247
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 608 MQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSP 667
+ D+ + +E+ ++T+ F++ + K + + A+S K + + + SP
Sbjct: 491 ISDISLGLEELI--NEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSP 548
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
II+FYP + ID+NGK +W+ V LL FVDE++L +AL P KL+ EE +
Sbjct: 549 IINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQ 599
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESK--FDVPKDDIAFRLM-VGH 439
R + + + EE N+ ++ + F K+ YY+SK F + ++ L+ +
Sbjct: 400 RKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQSKLHFSIDTEEGKGDLIEMTK 459
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
Y+ GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 460 HYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDI 494
>gi|68467492|ref|XP_722179.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
gi|46444129|gb|EAL03406.1| hypothetical protein CaO19.4969 [Candida albicans SC5314]
Length = 1422
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/287 (44%), Positives = 170/287 (59%), Gaps = 45/287 (15%)
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSN 159
MAIDGVAPRAKMNQQR+RRFR + E AE+ +K + +G +P E FDSN
Sbjct: 1 MAIDGVAPRAKMNQQRARRFRTAYE-----AEINL--KKAIENGEEIPKE----DPFDSN 49
Query: 160 CITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
ITPGT FMA L+ L Y+IH ++ D W I++ILS VPGEGEHKIM+YIR R+Q
Sbjct: 50 SITPGTEFMANLTNNLKYFIHKKITEDSSWANIEIILSGHEVPGEGEHKIMEYIRSIRSQ 109
Query: 220 PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPN-QARPCDVCGQMGHEMKE 276
D++PN +HC+ G DADLIMLGL TH+P+F ++REE F P + P D+ Q
Sbjct: 110 DDYNPNLRHCIYGLDADLIMLGLVTHDPHFALLREEVTFGPQRKVGPKDLHDQ------- 162
Query: 277 CVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVF 334
+F + LS+LREYL E L F Y F+R LDD++
Sbjct: 163 --------------------KFYLLHLSLLREYLSLEFQEIENQLNFEYDFDRILDDFIL 202
Query: 335 MCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENG 381
+ + +GNDFLP+LP L I +GA L+ +K+T+ ++ + ENG
Sbjct: 203 IMYVIGNDFLPNLPDLFINKGAFPLLIAAFKQTLLESDGYIN--ENG 247
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 608 MQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAPSFIPGGQFAPQDSP 667
+ D+ + +E+ ++T+ F++ + K + + A+S K + + + SP
Sbjct: 491 ISDISLGLEELI--NEKTDLKFELSHPFKPFEQLMAVLPARSKKLMPVVYRPLMSDEKSP 548
Query: 668 IIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
II+FYP + ID+NGK +W+ V LL FVDE++L +AL P KL+ EE +
Sbjct: 549 IINFYPHEVDIDMNGKTASWEAVVLLDFVDEKKLIEALKPIESKLTPEEKQ 599
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESK--FDVPKDDIAFRLM-VGH 439
R + + + EE N+ ++ + F K+ YY+ K F + ++ L+ +
Sbjct: 400 RKTIKQYQSANLIESEEVLNETKEVYSEKFQSWKNDYYQPKLHFSIDTEEGKGDLIEMTK 459
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
Y+ GL WVL YYY+GC SW WY+ +HYAP SD
Sbjct: 460 HYIEGLQWVLYYYYRGCPSWNWYYRYHYAPRISDI 494
>gi|71030174|ref|XP_764729.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351685|gb|EAN32446.1| hypothetical protein TP02_0165 [Theileria parva]
Length = 1726
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 202/386 (52%), Gaps = 82/386 (21%)
Query: 43 PNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYM 100
P+G FDNLYLD+NGI+H C+H ED++ V+IF+CI ++ IVRPRKLLY+
Sbjct: 101 PDG--FDNLYLDVNGIVHNCSHSVVDLCQNITCEDDIFVSIFQCIIKIVNIVRPRKLLYL 158
Query: 101 AIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPP------------ 148
A+DGVAPRAK+ QQR RRFRA+ E+ +++ I + L + L P
Sbjct: 159 AVDGVAPRAKIIQQRERRFRAALESTQQLI----ISQSLKSTNTHLEPSLHNLQCEPDES 214
Query: 149 ----------EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSD 198
+KE+ FD ITPGT FM RL+ L ++ +N + W+ +K+++S
Sbjct: 215 VQCEPDESVRDKEEFK-FDPIQITPGTAFMERLTVRLQFFALKMINENEQWRNLKIVVSG 273
Query: 199 ANVPGEGEHKIMDYIRKQRAQPD---HDPNTQ---------------------HCLCGAD 234
++VPGEGEHKIM+YIR +A H P TQ HC+ G D
Sbjct: 274 SDVPGEGEHKIMEYIRNNKAHRHSQFHHPRTQLDNRNNTTQLDSVSGERNCVSHCVYGLD 333
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLI+L LATHEP ++RE+ GH MK L N S
Sbjct: 334 ADLIVLSLATHEPYICLLREQVV------------FGH-MKNSSKLRMMVNMNS------ 374
Query: 295 EVEFIFVRLSVLREYLEKELAM-PNL-PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
+I + + +LREYL +L P L P +R +DD+VF+ FVGNDFLPHL I
Sbjct: 375 ---YILLHVGILREYLVTDLVEDPRLRSDPSVIDRVVDDFVFLTMFVGNDFLPHLLMASI 431
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQE 378
+G + + +Y++ + E LR+
Sbjct: 432 PDGGFNHTLQIYREYL---SESLRKH 454
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPV-NNNR 495
V EY+ G+ W+L YYY+G SW W+ P Y PF +D + + +N T + + N++
Sbjct: 641 VVREYLHGIQWILYYYYRGVPSWNWFLPCKYPPFVNDILTFLKTHSNTLTNSNTLTNSDT 700
Query: 496 ILKFILYHFDNKMFFWNKSLIN 517
+F ++ F N +L N
Sbjct: 701 FTQFSNTLTNSNTFTHNSTLPN 722
>gi|323455278|gb|EGB11147.1| hypothetical protein AURANDRAFT_22633 [Aureococcus anophagefferens]
Length = 356
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 151/390 (38%), Positives = 205/390 (52%), Gaps = 53/390 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+ +YP + V+ +NLY+D NG++H
Sbjct: 1 MGVPAFFRWLAARYPPLEARWVQ------------------------VENLYVDCNGVVH 36
Query: 61 PCTHPEDKPA--PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC HPE A P E+EM+ + +DRL RP KL+Y+A+DGVAPRAKMNQQR+RR
Sbjct: 37 PCCHPEGPGAVQPATEEEMLDNVGAYLDRLVAAARPTKLVYLALDGVAPRAKMNQQRTRR 96
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
F +++E E A +LLA P K + +D N ITPGT FMA+L+A +
Sbjct: 97 FCSAREADEAAAAT----RELLARRGHRPAAKAR---WDHNAITPGTEFMAKLAAFCRRW 149
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+ P + VI+SDA PGEGEHKIMD+IR+ +A PD +H +CG DADL+
Sbjct: 150 AESLVARCPQ---LSVIVSDAATPGEGEHKIMDWIRRSQADPDRR-GERHAVCGQDADLM 205
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
L LA H P ++RE + + G E ++ G P + +
Sbjct: 206 FLSLALHAPRVYVLRERVETRRKPRGGGKGGPPPEPRKAFG------PPRLQYLSCQR-- 257
Query: 299 IFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVD 358
+R ++ + A LPFP ER LDD+V +CFFVGNDFLP LPSL I +G +D
Sbjct: 258 --LRRCLIGDASLNAAADGALPFPRDDERFLDDFVLLCFFVGNDFLPQLPSLSIPDGGLD 315
Query: 359 RLVNLYKKTV------YKTQEQLRQEENGG 382
L+ LY++ + Y T E R G
Sbjct: 316 LLLLLYRRALPRHLGGYLTDEATRSPSPAG 345
>gi|300121215|emb|CBK21596.2| unnamed protein product [Blastocystis hominis]
Length = 938
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 197/373 (52%), Gaps = 64/373 (17%)
Query: 1 MGVPAFFRWLSRKYPSV--IVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGI 58
MG+P F+R+L +YP V IV E P+ D LYLD+NGI
Sbjct: 1 MGIPKFYRYLLERYPLVSEIVTSSEFLPR--------------------CDYLYLDVNGI 40
Query: 59 IHPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IH TH E +M+ + +F I +F ++PRKL+++A+DGVAPRAK+NQQRSR
Sbjct: 41 IHNATHGESAIGEIPTTDMVASYVFGYISDIFANIQPRKLMFIAVDGVAPRAKLNQQRSR 100
Query: 118 RFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
R+R + + ++ KG FDSNCITPGT FM ++ + Y
Sbjct: 101 RYRTALDRCLEVESTG-----------------HKGEVFDSNCITPGTEFMHKVDQLIEY 143
Query: 178 YIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
+I +++ DP W+ V+ S + PGEGEHKIM++IR PD++ +HC+ G DADL
Sbjct: 144 FIRKKISEDPLWRNTMVLYSSHSDPGEGEHKIMNFIRYLCTSPDYNAAERHCIYGLDADL 203
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLD-AEPNPESVITFGSEV 296
I+L L+ H+ N ++R ++ + K ++ AEP + I
Sbjct: 204 ILLSLSLHDVNVILLR-----------NIIDFRAYFRKVQTTVNRAEPIHKWEI------ 246
Query: 297 EFIFVRLSVLREYLEKELAMPNLPF--PYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
+SVLREYL ++L N + ER +DD+VF+ +GNDFLP LPSL+I
Sbjct: 247 ----FHISVLREYLFRDLQPSNASWMSVKDRERLIDDFVFIMILLGNDFLPELPSLDIVN 302
Query: 355 GAVDRLVNLYKKT 367
G++ L+ +YK+
Sbjct: 303 GSIQDLIAIYKEV 315
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
+ R Y + +V DD+ Y GL WVL YYY+G RSW W++ +HYAP SD
Sbjct: 419 RKRDYSLENEVILDDVC------RNYYEGLYWVLLYYYRGVRSWTWFYRYHYAPLPSDLA 472
Query: 476 NIAEVDTNFETGT 488
++F G
Sbjct: 473 RCDMKYSSFSLGA 485
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKAL 705
SP+ DFYP F ID+N KK W+GV L+PF+D +RL A+
Sbjct: 517 SPVADFYPARFSIDMNNKKNPWEGVNLIPFIDIDRLTAAM 556
>gi|269861191|ref|XP_002650309.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
gi|220066257|gb|EED43747.1| 5'-3' exonuclease [Enterocytozoon bieneusi H348]
Length = 623
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 237/496 (47%), Gaps = 79/496 (15%)
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 108
DNLYLD N IIHPCT+ E K K +++ + +D L +P+KL+Y+AIDGVAP+
Sbjct: 10 DNLYLDFNAIIHPCTNRELKDLDKLNEDLYHNLEAYLDALIAYCKPKKLIYIAIDGVAPK 69
Query: 109 AKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 168
AKMNQQR+RRFR +KE E + + E D L FD N ITPGT FM
Sbjct: 70 AKMNQQRTRRFRGAKEVYEN--NIVYLDEHEKYDNPYLE------VAFDHNAITPGTIFM 121
Query: 169 ARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
+L + I +L+ DP W VI S+ VPGEGE KIM+Y+R + + H
Sbjct: 122 EQLDEFISNLIQFKLSTDPLWANKTVIYSNYKVPGEGEQKIMEYLRIHKK----NLRESH 177
Query: 229 CLCGADADLIMLGLATHEPNFTIIREE--FKPNQARPCDVCGQMGHEMKECVGLDAEPNP 286
+ DADLI LGL N I+REE +K + P D H
Sbjct: 178 VIYSPDADLIFLGLTLPNYNIRIMREEVKYKEDTEIPKDRNYLDNH-------------- 223
Query: 287 ESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
F+ + + L+ + +L L ++ ER L D++F+CF +GNDFLP
Sbjct: 224 -----------FVLINENKLKNLIIDQLK-TGLEDNFNGERLLFDFIFLCFTIGNDFLPS 271
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSE------ 400
P EIR AV+++ + YK + G + +K F + ++
Sbjct: 272 APCFEIRTNAVEKIAEFLIRA-YKRSRTYITDFGGIVNFKALKEFFIECEKDENINLKEK 330
Query: 401 -------------EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVG-HEYVLGLC 446
E + E + E+ K +YY K D+ ++ +LM+ EY+ G+
Sbjct: 331 RINLQKSRNRMDLEFNEDVEFEICEEEGKLKYYIEKMDINSEE---KLMIACKEYIKGMV 387
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFIL----- 501
W+ +YY+ C SW +Y+P+++APF D + + EV+ + T ++P+ L +L
Sbjct: 388 WIYQYYFFNCPSWDYYYPYYFAPFMFDLMAL-EVENLYFTPSKPLKPFEQLLCVLPALSM 446
Query: 502 ---------YHFDNKM 508
Y++DNKM
Sbjct: 447 HLLPEPYRKYYYDNKM 462
>gi|123410059|ref|XP_001303596.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121884988|gb|EAX90666.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1018
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 234/501 (46%), Gaps = 87/501 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+ ++YP V ++ D S+P N LY+DMNGI +
Sbjct: 1 MGVPGFYRWMVQRYPMV--------------RRKMADPSRPIIN-----RLYIDMNGIFY 41
Query: 61 PC-----THPED-KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
T ED PA K E IF D L +I RP L+++A+DG AP AK +QQ
Sbjct: 42 KALAATGTGNEDLTPALKAE------IFRYTDMLVQICRPTDLIFIAVDGPAPNAKASQQ 95
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRR+ A+++ + + FD I+PGT FM +L+
Sbjct: 96 RSRRYLAARDHSM--------------------------NSFDRTQISPGTVFMDKLNDA 129
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +I D+ D W +VI S + V GEGEHKI+D+IR+ RA D DP+ HCL D
Sbjct: 130 LMEFIKDKREKDRTWSRPRVIYSSSFVAGEGEHKILDFIREGRAISDWDPDLVHCLYSTD 189
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADLI LGL THE N ++RE + K +A ++ IT S
Sbjct: 190 ADLIFLGLQTHEKNILLLRE-------------ADAANFQKSLSPFEA----KTAITNYS 232
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + +LREYL + E+ +DD++ + F +GNDF+P ++IR
Sbjct: 233 FDAFELIHFPLLREYLLLDFGCG----IDEIEKVIDDFIAISFLIGNDFIPSFTDIDIRS 288
Query: 355 GAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWE-- 412
G + +++ Y+K +T+ + + N + S VD+ + +E+ E
Sbjct: 289 GDYNDVIDQYRKFRDETKSHIVVDGNFDFQNLKIFLSM-VVDKCRQNYGIKNEIPEEELS 347
Query: 413 DGFKD---RYYESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
D F + Y ESK+ + KD + + + WVL+YY GC SW W +P+ Y
Sbjct: 348 DKFSEANKSYLESKYPEESQKDYLGLCREMSKSILDAFYWVLRYYNSGCISWTWSYPYLY 407
Query: 468 APFASDFIN-IAEVDTNFETG 487
AP I I E FETG
Sbjct: 408 APPLEVVIPFIDEYKPEFETG 428
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 657 PGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
P SPI FYPE F+ DLNGKK + V +LP +D + +A ++ E+
Sbjct: 452 PLANLMKAPSPIAKFYPEKFETDLNGKKAEYHAVVVLPILDYAAIQEAYESVISQVDAED 511
>gi|32766355|gb|AAH55175.1| Zgc:63635 protein [Danio rerio]
Length = 510
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 146/250 (58%), Gaps = 36/250 (14%)
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RRFR++KE EKI +K L G +LP E + FDSNCITPGT FMARL L
Sbjct: 11 RRFRSAKEAEEKI-------KKALEKGEVLPTE----ARFDSNCITPGTDFMARLQEQLK 59
Query: 177 YYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADAD 236
Y++H++L+ D W+G+ V LS PGEGEHKIM++IR + +P H+PNT+HCL G DAD
Sbjct: 60 YFVHNKLSTDKTWQGVNVYLSGHETPGEGEHKIMEFIRSESTKPGHNPNTRHCLYGLDAD 119
Query: 237 LIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEV 296
LIMLGL +HEP+F+++REE + + + IT E
Sbjct: 120 LIMLGLTSHEPHFSLLREEVRFGGKK-----------------------SQKRITAPEET 156
Query: 297 EFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F + LS++REY++ E + + F Y ER +DDWV M F VGNDF+PHLP L I
Sbjct: 157 TFHLLHLSLMREYIDYEFSELRKKISFEYDLERIIDDWVLMGFLVGNDFIPHLPHLHINH 216
Query: 355 GAVDRLVNLY 364
A+ L Y
Sbjct: 217 DALPLLYRTY 226
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVL 443
GV+ S + EE ++ ++E F K YY +K V F YV
Sbjct: 315 GVRDSHSTAGRAEGAEEDGEDDDMFETEFRQYKRTYYMTKMGVEVVSDEFLANQAKCYVE 374
Query: 444 GLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
G+ W+L YYY G +SW WY+P+HYAPF SD NI+ + F+
Sbjct: 375 GIQWILHYYYHGVQSWSWYYPYHYAPFLSDVRNISGLSLTFD 416
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSV 714
SPI+++YP+DFK DLNGK+ W+ V L+PF+D + A Y L+V
Sbjct: 452 SPIVEYYPQDFKTDLNGKQQEWEAVVLIPFIDALNHYTTDADSYYYLNV 500
>gi|281206450|gb|EFA80636.1| 5'-3' exoribonuclease [Polysphondylium pallidum PN500]
Length = 538
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/252 (46%), Positives = 157/252 (62%), Gaps = 32/252 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP +I + V DS+ P E+DNLYLDMNGIIH
Sbjct: 262 MGVPRFFRWVSERYPQIIQNLV--------------DSTAP-----EYDNLYLDMNGIIH 302
Query: 61 PCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+ + E+E++ + ID+LF I+RP+KLLYMAIDGVAPR+K+NQQR RRF
Sbjct: 303 ACSQEISNSLLTFSEEELIRKVCNYIDKLFHIIRPKKLLYMAIDGVAPRSKLNQQRQRRF 362
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ + + ++K++++G +P F ITPGT FM+ LS CL ++I
Sbjct: 363 LS-------VFLEDKAKQKMISEGKEIPE-----VIFSRTAITPGTEFMSNLSDCLQFFI 410
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++N D W+ +++I S PGEGEHKI+DYIRK +A PD DPN HCL G DADLI+
Sbjct: 411 KKKINEDMSWREVEIIFSGPENPGEGEHKIIDYIRKNKASPDWDPNQSHCLYGLDADLIL 470
Query: 240 LGLATHEPNFTI 251
L L THEP+F +
Sbjct: 471 LALVTHEPHFNL 482
>gi|358378678|gb|EHK16359.1| hypothetical protein TRIVIDRAFT_8924, partial [Trichoderma virens
Gv29-8]
Length = 189
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 131/189 (69%), Gaps = 5/189 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV-NGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MG+PA FRWLS KYP +I +E P +G IP D+++PNPNG E DNLYLDMNGI+
Sbjct: 1 MGIPAAFRWLSNKYPKIISPVIEQTPITTEDGITIPVDTTQPNPNGEELDNLYLDMNGIV 60
Query: 60 HPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
HPC+HPED+PAP DE+EMM+ +F DR+ +VRPRK+L +A+DGVAPRAKMNQQRSRRF
Sbjct: 61 HPCSHPEDRPAPADEEEMMLEVFRYTDRVVNMVRPRKILMIAVDGVAPRAKMNQQRSRRF 120
Query: 120 RASKETAEKIAEVARIREKL-LADGCILPP---EKEKGSHFDSNCITPGTPFMARLSACL 175
R+++E EK + + E L +G + P E FDSN ITPGTPFM L+ L
Sbjct: 121 RSAREAQEKEEDKKALIELLKRQNGGVFPAADSETVVKKAFDSNSITPGTPFMDILALSL 180
Query: 176 HYYIHDRLN 184
Y+ +LN
Sbjct: 181 RYWCQYKLN 189
>gi|358340790|dbj|GAA27297.2| 5'-3' exoribonuclease 1 [Clonorchis sinensis]
Length = 1804
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/279 (39%), Positives = 159/279 (56%), Gaps = 43/279 (15%)
Query: 88 LFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILP 147
L +++RPRK L++A+DGVAPRAKM QQR+RRF++++E + A+ + + +
Sbjct: 9 LVQLIRPRKTLFLAVDGVAPRAKMTQQRARRFQSAQEARKTKADAQKRGQATSVE----- 63
Query: 148 PEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEH 207
FD I+PGT FM RL L ++ ++ N + WK + +ILS + PGEGEH
Sbjct: 64 -------LFDPCVISPGTEFMERLHNVLKEFVKEQANQNEAWKHVDIILSGHDCPGEGEH 116
Query: 208 KIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVC 267
KI +Y+ +R QPD+ PN ++C+ G DADLI LGL THE N I+RE
Sbjct: 117 KIREYMSFKRHQPDYCPNERYCIYGMDADLIFLGLTTHELNMCILRENVV---------- 166
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL-AMPN-LPFPYSF 325
+ K CV ++ F LSVLREY++ E A+ N LPFPY
Sbjct: 167 -----KTKTCV--------------AEQLPFCVTYLSVLREYIDCEFEALKNSLPFPYDL 207
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
ER +DDW+FM F +GNDF+PH+P+L I ++ L + Y
Sbjct: 208 ERIVDDWIFMAFLLGNDFIPHIPNLHIHAESLLVLWDTY 246
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DSP+ F+PE F D+NGK +W+ V L+PF+DE L KA+ P + L+ E +
Sbjct: 554 DSPLAPFFPETFATDINGKIASWEAVVLIPFIDETILLKAMEPLNKGLTAAEQK 607
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 391 SFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVP---KDDIAFRLM-VGHEYVLGLC 446
SF+D + E +DE L + YY +K +P ++++ RLM + +YV L
Sbjct: 409 SFED-----DAELLSDEDELVYRMHRRDYYWTKLSIPVGSEEELKRRLMPLVTDYVRMLQ 463
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFILYHFDN 506
W+L YY+ W +Y+ +HYAPFA D + N + G+ ++N L + + FD+
Sbjct: 464 WILSYYFLRVADWNFYYAYHYAPFACDLMLYTAQFANSQLGSS--SDNEDLSWTKFDFDS 521
Query: 507 K 507
+
Sbjct: 522 Q 522
>gi|302828800|ref|XP_002945967.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
gi|300268782|gb|EFJ52962.1| hypothetical protein VOLCADRAFT_115887 [Volvox carteri f.
nagariensis]
Length = 229
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 144/255 (56%), Gaps = 58/255 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+RWLS +YP + QK+ P E DNLYLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERYPLL-------------NQKLTLTEGPP-----EIDNLYLDMNGIIH 42
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH K E++MM+ +F+ +++L +IVRP+KLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 43 NCTHANRKDVGNVTEEDMMLKVFDYLEKLIQIVRPQKLLFMAIDGVAPRAKMNQQRSRRF 102
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+++ E + FMARL L ++I
Sbjct: 103 KSAMERLK---------------------------------------FMARLGKHLRFFI 123
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++ DP W+ V+ S VPGEGEHKIM+YIR + QP + PN +HC+ G DADLIM
Sbjct: 124 RRKMAEDPLWQKPTVVFSGHEVPGEGEHKIMEYIRWDKRQPTYAPNQRHCMYGLDADLIM 183
Query: 240 LGLATHEPNFTIIRE 254
L L +HEP+F ++RE
Sbjct: 184 LSLVSHEPHFCLLRE 198
>gi|67466759|ref|XP_649521.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|56465985|gb|EAL44135.1| 5'-3' exonuclease domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704666|gb|EMD44867.1| 5'3' exonuclease domain containing protein [Entamoeba histolytica
KU27]
Length = 628
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 247/521 (47%), Gaps = 111/521 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ +RWL + P++ K +E + D ++ NPNG EFDNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNL-----SRKAKE----QFDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DK +E++ I + R+ IVRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 SSI---DKQTI---EEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFT 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
C+ + N ITPGT M ++S + +I
Sbjct: 106 TD---------------------CL-----------EGNAITPGTELMEKISVGIESFIL 133
Query: 181 DRLNND--PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+++NN W+ IKVI+S +VPGEGEHKI++YIR Q N H + G DADL+
Sbjct: 134 NQMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQER-----INESHVIYGEDADLL 188
Query: 239 MLGLATHEPNFTIIREE----FKPNQ--ARPCDVCGQMGHEMKECV-----GLDAEPNPE 287
+L L H + I+R++ F N+ ++P MK+ + + E
Sbjct: 189 LLSLVLHYDSIFILRKDTRQIFDKNKKGSKPARNGTGKSKVMKDKIKKVENEKIEKEKKE 248
Query: 288 SVITFGSE-----VEFIFVRLSVLREYLEKELAMPNLPFPYSFER--ALDDWVFMCFFVG 340
FGS+ + F F +S+ + K+L + + S ER +D++++ G
Sbjct: 249 LKKVFGSDDDEFLIPFEFANISL----ISKKLLELSSQYENSIERLELENDFIYLMSIAG 304
Query: 341 NDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSE 400
NDFLP++ ++I GA++ ++N+Y + K ++ ENG GV F ++ + +
Sbjct: 305 NDFLPNIEGIDIYAGALNTVLNIYFQLHSKG---IKITENGKVNNNGVLAFFTELAQHEQ 361
Query: 401 EE---------------------ESNDEVRLWEDGFKDRYYESKF----DVPKDDIAFRL 435
++N ++L + G+K+RY ++ F + KD +
Sbjct: 362 RLIESQMKTRRGSAQPICGFINIDTNKIIKLGQSGYKERYVQTYFMNKEEYIKDSVK--- 418
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
Y+ G+ WV YY SWKW + HYAP F++
Sbjct: 419 ----SYLEGMNWVFNYYCGNAFSWKWGYKCHYAPLLCHFVD 455
>gi|407040580|gb|EKE40208.1| 5'-3' exonuclease domain containing protein [Entamoeba nuttalli
P19]
Length = 628
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 246/521 (47%), Gaps = 111/521 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ +RWL + P++ K +E D ++ NPNG EFDNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNL-----SRKAKE----HFDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DK +E++ I + R+ IVRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 SSI---DKQTI---EEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFT 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
C+ + N ITPGT M ++S + +I
Sbjct: 106 TD---------------------CL-----------EGNAITPGTELMEKISVGIESFIL 133
Query: 181 DRLNND--PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+++NN W+ IKVI+S +VPGEGEHKI++YIR Q N H + G DADL+
Sbjct: 134 NQMNNKGLDYWRRIKVIVSGVHVPGEGEHKIIEYIRSQER-----INESHVIYGEDADLL 188
Query: 239 MLGLATHEPNFTIIREE----FKPNQ--ARPCDVCGQMGHEMKECV-----GLDAEPNPE 287
+L L H + I+R++ F N+ ++P MK+ + + E
Sbjct: 189 LLSLVLHYDSIFILRKDTRQIFDKNKKGSKPARNGTGKSKVMKDKIKKVENEKIEKEKKE 248
Query: 288 SVITFGSE-----VEFIFVRLSVLREYLEKELAMPNLPFPYSFER--ALDDWVFMCFFVG 340
FGS+ + F F +S+ + K+L + + S ER +D++++ G
Sbjct: 249 LKKVFGSDDDEFLIPFEFANISL----ISKKLLELSSQYENSIERLELENDFIYLMSIAG 304
Query: 341 NDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSE 400
NDFLP++ ++I GA++ ++N+Y + K ++ ENG GV F ++ + +
Sbjct: 305 NDFLPNIEGIDIYAGALNTVLNIYFQLHSKG---IKITENGKVNNNGVLAFFTELAQHEQ 361
Query: 401 EE---------------------ESNDEVRLWEDGFKDRYYESKF----DVPKDDIAFRL 435
++N ++L + G+K+RY ++ F + KD +
Sbjct: 362 RLIESQMKTRRGSAQPICGFINIDTNKTIKLGQSGYKERYVQTYFMNKEEYIKDSVK--- 418
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
Y+ G+ WV YY SWKW + HYAP F++
Sbjct: 419 ----SYLEGMNWVFNYYCGNAFSWKWGYKCHYAPLLCHFVD 455
>gi|145552342|ref|XP_001461847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429683|emb|CAK94474.1| unnamed protein product [Paramecium tetraurelia]
Length = 351
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 195/384 (50%), Gaps = 79/384 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+ W++ K D YLDMN II+
Sbjct: 1 MGVPNFYSWVNEK---------------------------------RVDYFYLDMNQIIY 27
Query: 61 PC-THP----EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQR 115
C T P +D+ +D D++ V+I +D + +V P++LL++A DGVAPRAKMNQQR
Sbjct: 28 KCATDPSVLFKDQLRERDFDDVWVSIINYLDMIINLVNPQQLLFLAFDGVAPRAKMNQQR 87
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
RRF++ K A + +I G E K + F +PGT FM +L+ +
Sbjct: 88 QRRFQSQKRYKYLSAHLQQI-------GLFQKNETYKNNQF-----SPGTEFMTQLNQQI 135
Query: 176 HYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADA 235
+YI + + DP +K +K+I S +VPGEGEHK++ +IR + DPN+ H + GADA
Sbjct: 136 KFYIERKYSEDPKFKNLKIIFSGCDVPGEGEHKLLSFIRNMQ----FDPNSVHMIYGADA 191
Query: 236 DLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSE 295
DLIMLGL T N IIRE+ K Q A VI
Sbjct: 192 DLIMLGLLTQLKNVLIIREDLKFKQT--------------------ASAAANRVIKIP-- 229
Query: 296 VEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
EF+ + +S++REYL+ E A+ + Y R +DD++ +CFFVGNDFLP + +IR
Sbjct: 230 -EFLVINISIVREYLDLEFAVLKDKMKVAYDIHRIIDDFILLCFFVGNDFLPRIYCFDIR 288
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQ 377
G ++ LV+L+KK + + + Q
Sbjct: 289 IGTIEPLVDLFKKHLTNANDYIVQ 312
>gi|224587591|gb|ACN58687.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 713
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/134 (70%), Positives = 107/134 (79%), Gaps = 4/134 (2%)
Query: 242 LATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE----SVITFGSEVE 297
LATHEPNFTIIREEFKPNQ RPC +CGQ GHE+K+C G+ E E + SE E
Sbjct: 1 LATHEPNFTIIREEFKPNQPRPCAMCGQKGHELKDCQGVAREKQGEHDEFADAMPASEQE 60
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
FIF+RL VLREYLE+EL M +LPFP+ FER +DDWVFMCFFVGNDFLPHLPSLEIREGA+
Sbjct: 61 FIFIRLCVLREYLERELTMASLPFPFDFERTVDDWVFMCFFVGNDFLPHLPSLEIREGAI 120
Query: 358 DRLVNLYKKTVYKT 371
DRLV +YK V+KT
Sbjct: 121 DRLVGIYKDVVHKT 134
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 80/115 (69%), Gaps = 3/115 (2%)
Query: 376 RQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
R + G GRGVKR +D D + E D VRLWEDG+K RYY++KFDV D FR
Sbjct: 234 RAGTSDGQDGRGVKRKAEDSDSEPDPE---DNVRLWEDGWKQRYYKTKFDVDATDDDFRK 290
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V YV GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I + T+FE GT+P
Sbjct: 291 KVVMSYVEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKP 345
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 44/54 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S IIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y LS EE++
Sbjct: 376 ESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENK 429
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G++T++G VKLE V+LIMQ +G+ ED IFKKR++ + FK RNK K K
Sbjct: 136 GYITENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKRRNKEK------KKRMKAQQ 189
Query: 651 KAPSFIPGGQFAPQ 664
+ PSF+ GQFAPQ
Sbjct: 190 QGPSFLTSGQFAPQ 203
>gi|428673024|gb|EKX73937.1| XRN 5'-3' exonuclease family protein [Babesia equi]
Length = 1049
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 168/563 (29%), Positives = 254/563 (45%), Gaps = 88/563 (15%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
GVP + W+ + G + P SS NG+++ Y+DMN +IH
Sbjct: 441 GVPRLYSWMIENF---------------YGMRKPLKSSDLE-NGVDY--FYVDMNALIHS 482
Query: 62 CTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
TH P ED+ M I + F++V+PRK++Y+A+DGV P AK+NQQR+RRFR
Sbjct: 483 ATHGNIYPVVTIEDQQRMKRITAALLNTFKLVKPRKVMYIAVDGVCPSAKINQQRTRRFR 542
Query: 121 ASKETAEKIAEV------------ARIREKLLADGCILPPEKEKGS---HFDSNCITPGT 165
K +K+ + + + L + +L K G F+ N I+PGT
Sbjct: 543 LCK-VIDKVKSILEPEEDTESEEDSEEPKPLTPENYVLRKSKIDGYDNISFNPNYISPGT 601
Query: 166 PFMARLSACLHYYIHDRLNNDPG-WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
FM RL + +I L G W V+ S NVPGEGEHKI D IRK
Sbjct: 602 DFMTRLDNEIKNWI--ALQTHLGTWGDCYVVYSGTNVPGEGEHKIYDLIRKVTTLDRKTR 659
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREE----------FKPNQARPCDVCGQMGHEM 274
H + G DADL++L L T I+REE KP+ D G +
Sbjct: 660 LESHLVYGLDADLMILSLITKMSKMYILREEKDSTPHVLAKIKPDPYYAKDT-GLVHFHS 718
Query: 275 KECVGLDAEPNPESVITFGSEVEFIFVRLS--VLREYLEKELAMPNLPFPYSFERALDDW 332
K+ +GL ++ N E V++ ++ R V ++ K+ A L + R DD+
Sbjct: 719 KDYIGLKSD-NFE-VLSMRKLRAGMYNRCVNYVNTKFKPKDSAF--LTKKGTPARLTDDF 774
Query: 333 VFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSF 392
+ FF GNDFLPHLP++++++ + L+N Y + K L G + R
Sbjct: 775 ALLSFFAGNDFLPHLPNVDLKDSSFTDLINTYYSLLPKFNGFLTH------GLKIHTRRL 828
Query: 393 DDVDESSEEEESN--------DEVRLWED--GFKDRYYESKFDVPKDDI-AFRLMVGHEY 441
+ ++ E+ + V + D G+ YYE K + +D A R M +Y
Sbjct: 829 QSLMKAISPNEAKYFKIKAEVESVPEFADSSGYAKFYYEEKCGIDYNDKRAIRKMC-EDY 887
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG-----------TQP 490
+ GL W L YY+ GC SW W + +HYAP ASD ++ + F G P
Sbjct: 888 IEGLFWNLSYYHSGCPSWDWCYKYHYAPLASDLARVSSISVTFYKGNPITPLEHLLAVTP 947
Query: 491 VNNNRIL----KFILYHFDNKMF 509
+ N +L +F+++H +F
Sbjct: 948 PSGNELLPPRYRFVIFHSACSLF 970
>gi|123469088|ref|XP_001317758.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121900500|gb|EAY05535.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1020
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 232/505 (45%), Gaps = 79/505 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW++++YP V + +N D ++P + D Y+D N II+
Sbjct: 1 MGVPGFYRWVTQRYPLV--------RRRMN------DPARP-----KIDYFYIDFNCIIY 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ ++ + +D L ++++P+ +L++++DG AP AK QQRSRRF
Sbjct: 42 NALRSISMSSGGTILQLFNEVCRYLDVLVQVIKPQIVLFISVDGPAPFAKCTQQRSRRFV 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A++++ G+ F++ I+ GT FM L L Y
Sbjct: 102 AARDSV--------------------------GAAFNTTAISVGTTFMEDLHQHLLEYFK 135
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
++N+D W ++I S PGEGEHK +YIR+ R D+DPN+ HC+ DADLI L
Sbjct: 136 RKVNSDRAWSTPQLIYSSHRTPGEGEHKFFNYIREIRKTADYDPNSTHCIYSPDADLIFL 195
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
L + E I+RE P + G G K G D +F
Sbjct: 196 ALQSKEKYIYIMREW--DAWVGPNENVGN-GKLAKLKTGAD---------------DFEL 237
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ L +L+EYL + P +P +DD+ F +GNDF+PH P + I+ G D++
Sbjct: 238 LHLPILKEYLSYDF--PGIP----LSNLVDDFAGFSFLIGNDFIPHFPDVIIQHGDFDQV 291
Query: 361 VNLYKKTVYKTQEQLRQEENGGGGG-----RGVKRSFDDVDESSEEEESNDEVRLWEDGF 415
V Y+K++ +T++ L + R V + + E+ E + +++ +
Sbjct: 292 VIAYQKSLLETKQYLIVDGKFNKPALQIFLRSVVHQLKNKSKKQEKAEQDKQMQNYLKTA 351
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP---FAS 472
+ E + K D F + + WVL+YY +GC SW W F + YAP S
Sbjct: 352 RTYISEKYPEETKRDPEFEKKLSFSVLDSFDWVLEYYTEGCPSWTWCFQYFYAPPLIIVS 411
Query: 473 DFINIAEVDTNFETGTQPVNNNRIL 497
++ + E ++FE P+ ++L
Sbjct: 412 EY--VLEHSSHFELSRPPLPFEQLL 434
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 653 PSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
PS + F+P SPI +YP F IDLNG+ +GV L+PFVD E++ + ++ KL
Sbjct: 446 PSALSSLMFSP--SPISSYYPTSFSIDLNGRAVEHEGVVLIPFVDVEKVRELVSSNLSKL 503
Query: 713 SVEESE 718
E+E
Sbjct: 504 GPNETE 509
>gi|395510109|ref|XP_003759325.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 117
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/116 (81%), Positives = 103/116 (88%)
Query: 26 PQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
P+E NG KIP D+SKPNPN +EFDNLYLDMNGIIHPCTHPEDKPAPK+EDEMMVAIFE I
Sbjct: 1 PKECNGVKIPVDTSKPNPNEVEFDNLYLDMNGIIHPCTHPEDKPAPKNEDEMMVAIFEYI 60
Query: 86 DRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLA 141
DRLF IVRPR+LLYMAIDGVAPRAKMNQQRSRRFRASKE E E R+RE++L+
Sbjct: 61 DRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFRASKEGMEATIEKQRVREEILS 116
>gi|70926599|ref|XP_735814.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56509808|emb|CAH84865.1| hypothetical protein PC301271.00.0 [Plasmodium chabaudi chabaudi]
Length = 260
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 79 VAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREK 138
+ IF I+RLF I+ P+KLLYMAIDGVAP+AKMNQQRSRRF++ + + +R K
Sbjct: 2 LNIFLYIERLFDIIEPQKLLYMAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNK 61
Query: 139 LLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSD 198
L++ +P E +H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SD
Sbjct: 62 FLSENRNVPDEY---NHWDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSD 118
Query: 199 ANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKP 258
ANV GEGEHKI ++I+ QRAQ +DPNT+H + G DADLIML LA+HEP F I+RE
Sbjct: 119 ANVCGEGEHKIYNFIKSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINL 178
Query: 259 NQ 260
+Q
Sbjct: 179 DQ 180
>gi|167379332|ref|XP_001735097.1| 5'->3' exoribonuclease [Entamoeba dispar SAW760]
gi|165903060|gb|EDR28720.1| 5'->3' exoribonuclease, putative [Entamoeba dispar SAW760]
Length = 628
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 243/521 (46%), Gaps = 111/521 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ +RWL + P++ +E D ++ NPNG EFDNLY+D+NG+IH
Sbjct: 1 MGVPSLYRWLCKTVPNLSRRAIE---------HFDIDLTRNNPNGREFDNLYIDVNGLIH 51
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
DK + +E++ I + R+ IVRPR LLY+AIDGV P AKM QQR RRF
Sbjct: 52 NSI---DK---QTIEEVIEHIQNQLMRIIMIVRPRNLLYIAIDGVCPIAKMIQQRKRRFT 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
C+ + N ITPGT M ++S + +I
Sbjct: 106 TD---------------------CL-----------EGNAITPGTELMEKISTGIESFIL 133
Query: 181 DRLNND--PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
+++NN W+ +KVI+S +VPGEGEHKI++YIR Q N H + G DADL+
Sbjct: 134 NQMNNKGLDYWRRVKVIVSGVHVPGEGEHKIIEYIRSQERT-----NESHVIYGEDADLL 188
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLD---------------AE 283
+L L H + I+R++ + + D + + +G A+
Sbjct: 189 LLSLVLHYDSIFILRKDTR----QIFDKSKKGSKPARNGIGKSKVIKDKIKKIENEKVAK 244
Query: 284 PNPESVITFGSE-----VEFIFVRLSVLREYLEKELAMPNLPFPYSFER--ALDDWVFMC 336
E FGS+ + F F +S+ + K L+ + + ER +D++++
Sbjct: 245 EKKELKKVFGSDDDEFLIPFEFANISL----ISKRLSELSSQYGNPIERLELENDFIYLM 300
Query: 337 FFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVD 396
GNDFLP++ ++I GA++ +++ Y + K ++ ENG GV F ++
Sbjct: 301 SIAGNDFLPNIEGIDIYAGALNTVLSTYFQLHSKG---IKITENGKVNNNGVHTFFIELV 357
Query: 397 ESSEEE---------------------ESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRL 435
+ ++ ++N ++L + G+K+RY ++ F ++ I +
Sbjct: 358 QYEQKLIENQMKTRRGSAQPICGFVNIDTNKTIKLGQSGYKERYVQTYFMNKEEYIKDTV 417
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
Y+ G+ WV YY SWKW + HYAP F++
Sbjct: 418 ---KSYLEGMNWVFNYYCGNTFSWKWGYKPHYAPLLCHFVD 455
>gi|219111223|ref|XP_002177363.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411898|gb|EEC51826.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 156
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 119/167 (71%), Gaps = 19/167 (11%)
Query: 91 IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEK 150
IV+P+ +YMAIDGVAPRAK+NQQRSRRFR++ + AE ++ +
Sbjct: 1 IVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAMDMAEATKDL----------------KD 44
Query: 151 EKGSH---FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEH 207
EKG+ FDSNCITPGT F+A++S + Y+I ++ DP W G+ VI S +VPGEGEH
Sbjct: 45 EKGNQREVFDSNCITPGTEFLAKVSNTIQYFIRKKIKEDPSWHGLTVIFSGHDVPGEGEH 104
Query: 208 KIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE 254
KIM +IR+ RAQP++ PNT+HC+ G DADLIMLGL THEP+FTI+RE
Sbjct: 105 KIMQHIREMRAQPNYAPNTRHCIYGQDADLIMLGLVTHEPHFTILRE 151
>gi|449482933|ref|XP_004156447.1| PREDICTED: 5'-3' exoribonuclease 4-like, partial [Cucumis sativus]
Length = 685
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 144/238 (60%), Gaps = 13/238 (5%)
Query: 258 PNQARPCDVCGQMGHEMKECVGLDAEPNPESVI--TFGSEVEFIFVRLSVLREYLEKELA 315
P Q C CG++GH EC G P + T + ++ F+ + VLREYL+ EL
Sbjct: 10 PGQQEKCYNCGKVGHLAAECRGKSDGPEDWNGADETPIHKKKYQFLNIWVLREYLQYELD 69
Query: 316 MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-----YK 370
+PN PF +FER +DD+VF+CFFVGNDFLPH+P+LEIREGA++ L+++Y+K Y
Sbjct: 70 IPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAINLLMHIYRKEFPAIGGYL 129
Query: 371 TQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDD 430
T QE N GR + + + D+++L E G+K+RYY KF+ +
Sbjct: 130 TDAGEAQENNEEMRGRARRE-----NGPPPPPPTVDKIKLGEPGYKERYYAEKFNANPAN 184
Query: 431 IA-FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
IA + V +YV GLCWV +YYY G SW+WY+P+HY+PFASD N+A+++ F G
Sbjct: 185 IAEIKQDVVLKYVEGLCWVCRYYYSGVCSWQWYYPYHYSPFASDLKNLADLEITFFIG 242
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
AA ST P P SPI++FYP DF+ID+NGK+F WQGVA LPF+DE +L
Sbjct: 257 AASSTALPEKYRNLMTDP-SSPILEFYPSDFEIDMNGKRFQWQGVAKLPFIDERKL 311
>gi|310831294|ref|YP_003969937.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
gi|309386478|gb|ADO67338.1| putative 5'-3' exonuclease [Cafeteria roenbergensis virus BV-PW1]
Length = 562
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 152/537 (28%), Positives = 240/537 (44%), Gaps = 120/537 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FF WL + Y +K F ++ N +F L LD N +IH
Sbjct: 1 MGVPGFFLWLMKNY-----------------KKNKFVNNINEFNKTDFKWLCLDANCLIH 43
Query: 61 P------CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
P +P+ K E++M+ E I++L +V+P + LY+A+DGVAP AK+ QQ
Sbjct: 44 PKCFEVLAENPDFKNLNSLENKMISRCLEYIEKLVLLVKPTEGLYIAVDGVAPVAKIKQQ 103
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
RSRRF++ + A L D +P K ++++ ITPGT FM +++
Sbjct: 104 RSRRFKSVSDNA---------LYDRLKDKHNIP----KNKFWNNSSITPGTDFMMKITK- 149
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ-HCLCGA 233
YI + + K+I S N PGEGEHKI+D+IR+++ ++ N+ + + G
Sbjct: 150 ---YIKEWATK----QSYKIIFSSGNTPGEGEHKILDFIRQRQINYTNELNSGPYVIYGL 202
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHE-MKECVGLDAEPNPESVITF 292
DADLI L +A + + ++RE N+ + D+ + E MKE + E V
Sbjct: 203 DADLIFLSIALNRNDVYLMREAEHLNKGK-GDILQLIDLEVMKESINYTMLQMLEGVEIK 261
Query: 293 GSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
++ + I +D++F+C+F+GNDFLPH SL+I
Sbjct: 262 PTKTQLI------------------------------NDFIFICYFLGNDFLPHYQSLDI 291
Query: 353 REGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEES-------- 404
+ + L+ Y + T + + +N K + + +E+EE
Sbjct: 292 YDDGLPILLKTYATVISNTILPILKIQNNSTVQFNQKTLIEFIKLLAEQEEDILLKISKK 351
Query: 405 --------------------------NDEVRLWEDGFKD---RYYESKFDVPKDDIAFRL 435
ND VRL E F D RYYE F ++ +
Sbjct: 352 HIYKPRLEGTDYEKEVKRIEWLRFKINDPVRLGEGTFDDYSKRYYEHYFYGSNNENIIK- 410
Query: 436 MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF---INIAEVDT-NFETGT 488
+ +EY+ GL WV YY+ G SW +Y+P+ APF D IN+ ++ F+ GT
Sbjct: 411 -ICYEYIKGLTWVTNYYFYGVPSWDYYYPYDQAPFLKDLSKVINLLDMTHFKFKKGT 466
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
++SP+ YP DFK D K+ WQG+ LLPF++ + + K +
Sbjct: 496 EESPLGHLYPIDFKQDFIHKRKYWQGIPLLPFLEIDTIQKEFS 538
>gi|384483989|gb|EIE76169.1| hypothetical protein RO3G_00873 [Rhizopus delemar RA 99-880]
Length = 1163
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 173/312 (55%), Gaps = 59/312 (18%)
Query: 73 DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEV 132
+E++++ IF I ++ ++P+K+ ++ +DGV PR KMNQ+RS++F+++KE+
Sbjct: 53 NEEQILPRIFNKICYIYGQIKPKKIFFLTVDGVTPRIKMNQERSKQFQSAKESL------ 106
Query: 133 ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGI 192
I+ + LAD + PGT FMA+L+A L Y + +++ D W+ +
Sbjct: 107 --IKREPLAD-----------------VVLPGTAFMAKLTAQLRYLVAKKISEDIEWRDV 147
Query: 193 KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTII 252
+VI+S +VPGE +HKI +YIR ++Q D+DPNT+HC+ G DL+++ LATHEPNF ++
Sbjct: 148 EVIVSGPDVPGESKHKIAEYIRLCKSQADYDPNTKHCMYGIRDDLLLVSLATHEPNFALV 207
Query: 253 REEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEK 312
C DA+ E + ++ + LS++RE LE+
Sbjct: 208 ------------------------CEQDDAQNADER-----KKSQYFLLHLSLIRECLER 238
Query: 313 ELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
E + +LPF Y FER LDD+V + ND LP L L++ G ++ L+ +YK+ +
Sbjct: 239 EFSSLKSSLPFKYDFERILDDFVLLSLITSNDLLPRLSGLQVNRGGLNILMKIYKEVLPT 298
Query: 371 TQEQLRQEENGG 382
+ + +NGG
Sbjct: 299 CDDYI---QNGG 307
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 413 DGFKDRYYESKFDVPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPF 470
+ +K YY+ D+ D A L+ Y+L + + +YYQG SW+W++P+HYAP
Sbjct: 498 EKWKAAYYKEMLDI--DFFASDLLEHAVASYILSIQLINSFYYQGILSWRWFYPYHYAPK 555
Query: 471 ASDFINIA 478
SD ++
Sbjct: 556 LSDLKDLG 563
>gi|207345483|gb|EDZ72294.1| YGL173Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1409
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 136/223 (60%), Gaps = 29/223 (13%)
Query: 152 KGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMD 211
KG FDSN ITPGT FMA+L+ L Y+IHD+++ND W+ +++I S VPGEGEHKIM+
Sbjct: 5 KGEPFDSNSITPGTEFMAKLTKNLQYFIHDKISNDSKWREVQIIFSGHEVPGEGEHKIMN 64
Query: 212 YIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMG 271
+IR ++Q D + NT+HC+ G DADLIMLGL+TH P+F ++REE G+
Sbjct: 65 FIRHLKSQKDFNQNTRHCIYGLDADLIMLGLSTHGPHFALLREEV---------TFGRRN 115
Query: 272 HEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLE---KELAMPNLPFPYSFERA 328
E K F + LS+LREY+E KE+A + F Y+FER
Sbjct: 116 SEKKSL----------------EHQNFYLLHLSLLREYMELEFKEIA-DEMQFEYNFERI 158
Query: 329 LDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
LDD++ + F +GNDFLP+LP L + +GA L+ +K+ + T
Sbjct: 159 LDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHT 201
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 400 EEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
++EE E ++ + F K YY K D + +YV GL WVL YYY+GC
Sbjct: 374 DKEELETEKTIYNERFERWKHEYYHDKLKFTTDSEEKVRDLAKDYVEGLQWVLYYYYRGC 433
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW WY+P HYAP SD + + D F+
Sbjct: 434 PSWSWYYPHHYAPRISDLVKGLDQDIEFD 462
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 642 QMKMAAQSTKAPSFIPGGQFAP----QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVD 697
Q MA ++ + IP F P + SPI DFYP + ++D NGK W+ V L+ FVD
Sbjct: 471 QQLMAVLPERSKNLIPP-TFRPLMYDEQSPIHDFYPAEVQLDKNGKTADWEAVVLISFVD 529
Query: 698 EERLHKALAPYYEKLSVEE 716
E+RL +A+ PY KLS EE
Sbjct: 530 EKRLIEAMQPYLCKLSPEE 548
>gi|123507009|ref|XP_001329319.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121912273|gb|EAY17096.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 1017
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 223/515 (43%), Gaps = 90/515 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV F+RWL ++YP + Q N P +N Y+D N II+
Sbjct: 1 MGVAGFYRWLVQRYPLI--------RQRANRLSYP-----------RINNFYIDFNCIIY 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
D + I +D L + ++P LL++A+DG AP AK QQRSRRF
Sbjct: 42 NSIRLVKPSLDGDNTVLFNEICRYVDLLVQTIKPESLLFIAVDGPAPLAKCAQQRSRRFV 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A+++ E G+ F + I+ GT FM L L +I+
Sbjct: 102 AARD-------------------------HEDGT-FSTAAISVGTEFMEELHEHLLKFIN 135
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
R+ NDP W KVI S PGEGE+K +Y+R+ +HD HC+ DADL+ L
Sbjct: 136 SRIENDPIWSQPKVIYSSHRTPGEGENKFFNYMREHMFTEEHDEFATHCIYSPDADLVFL 195
Query: 241 GLATHEPNFTIIRE---EFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
L T N ++RE PN+ DV +++ G +
Sbjct: 196 ALQTGLKNIYLMREWGSWMGPNE----DVANGEIDKLRVSPG-----------------D 234
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
F + L +LR+Y +KE +LP R ++D+V + F +GNDF+PH P ++I G
Sbjct: 235 FELLHLPLLRDYFQKEFPESDLP------RLINDFVAISFLIGNDFIPHFPEIDIHNGDF 288
Query: 358 DRLVNLY------KKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLW 411
D ++ Y +K T+E +EN + V + S + +
Sbjct: 289 DNILTAYRLSLLDRKKYLITEEITYDKENLLAFLKAVVANVRSKARPSGKPAKTKHAKST 348
Query: 412 EDGFKD---RYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYA 468
E K+ Y +SK+ + F + H + WVLKYY++GC + W F + Y
Sbjct: 349 ELHTKEGARSYLKSKYKSGFNK-EFEEELCHSVIDSFNWVLKYYFEGCPDYTWQFHYFYP 407
Query: 469 P---FASDFINIAEVDTNFETGTQPVNNNRILKFI 500
P +++ + + + NFE G P+ ++L +
Sbjct: 408 PPLVLVAEY--VLDYEPNFEQGRPPLPFEQLLSIL 440
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 653 PSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKL 712
P I F+P SP+ ++YP+ F+IDLNG+K+ ++GV L+PFVD E++ + + L
Sbjct: 449 PYPIASLMFSP--SPLAEYYPDKFEIDLNGRKYEYEGVTLIPFVDMEKIRTETSRVFGAL 506
Query: 713 SVEESE 718
S +E +
Sbjct: 507 SPKEKK 512
>gi|358389627|gb|EHK27219.1| hypothetical protein TRIVIDRAFT_207716 [Trichoderma virens Gv29-8]
Length = 904
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 122/177 (68%), Gaps = 14/177 (7%)
Query: 55 MNGIIHPCTHP---EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
MNGIIH CTH ED E+EM + IF I+ LF ++P+KL +MAIDGVAPRAKM
Sbjct: 1 MNGIIHNCTHKDAGEDATFRLSEEEMFIRIFNYIEHLFGKIKPKKLFFMAIDGVAPRAKM 60
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
NQQR+RRFR + + AEK REK + +G LP E+ FDSNCITPGT FMA+L
Sbjct: 61 NQQRARRFRTALD-AEKA------REKAIREGIELPKEEP----FDSNCITPGTEFMAKL 109
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
S L Y+++ +++ D W+G ++LS VPGEGEHKIM+YIR +AQP++DPN ++
Sbjct: 110 SQQLRYFVNKKVSEDTDWQGCDIVLSGHEVPGEGEHKIMEYIRNAKAQPNYDPNARN 166
>gi|70933012|ref|XP_737941.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56513750|emb|CAH81056.1| hypothetical protein PC000391.04.0 [Plasmodium chabaudi chabaudi]
Length = 314
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 138/254 (54%), Gaps = 43/254 (16%)
Query: 154 SHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYI 213
+H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SDANV GEGEHKI ++I
Sbjct: 4 NHWDSNIITPGTQFMHELSIALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFI 63
Query: 214 RKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQA---------RPC 264
+ QRAQ +DPNT+H + G DADLIML LA+HEP F I+RE +Q +
Sbjct: 64 KSQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDQKEDDKPQVKDKYV 123
Query: 265 DVCGQMGHEMKECVGLDAEPNPESV------------------------------ITFGS 294
V G +++ C N + I + +
Sbjct: 124 GVFKGKG-DLQYCTKFMKSNNSTTTDGTNNKGKKKNCNKYNDRNYANINMSSTCSINYEN 182
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
E + L++LREYL K+ Y+ ER +DD++F+CF GNDFLPHLPS+ I
Sbjct: 183 WNELQILDLTILREYLYKDFFFDT---KYNLERCIDDFIFICFLCGNDFLPHLPSISIAS 239
Query: 355 GAVDRLVNLYKKTV 368
G++D+L+ LY+K +
Sbjct: 240 GSIDQLILLYQKVL 253
>gi|68068571|ref|XP_676196.1| exoribonuclease [Plasmodium berghei strain ANKA]
gi|56495779|emb|CAH94068.1| exoribonuclease, putative [Plasmodium berghei]
Length = 1136
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 138/251 (54%), Gaps = 43/251 (17%)
Query: 155 HFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIR 214
H+DSN ITPGT FM LS L Y+I ++ ND WK I VI SDANV GEGEHKI ++I+
Sbjct: 15 HWDSNIITPGTQFMHELSVALKYFIEHKITNDEKWKKIVVIFSDANVCGEGEHKIYNFIK 74
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR--------EEFKP-------- 258
QRAQ +DPNT+H + G DADLIML LA+HEP F I+R EE KP
Sbjct: 75 SQRAQKGYDPNTRHVIHGMDADLIMLSLASHEPYFYILREIINLDPKEENKPQVKDNYVG 134
Query: 259 -----------------NQARPCDVCGQMGHEMKECVGLD----AEPNPESVITFGSE-- 295
N + D G + K C + A N S + E
Sbjct: 135 VFKGKGDLQYCTKFLRNNNSTTIDGNSNKG-KKKYCNKYNDRNYANINISSTCSINYENW 193
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
E + L++LREYL K+ Y+ ER +DD++F+CF GNDFLPHLPS+ I G
Sbjct: 194 NELQILDLTILREYLYKDFF---FDAKYNLERCIDDFIFICFLCGNDFLPHLPSISIASG 250
Query: 356 AVDRLVNLYKK 366
++D+L+ LY+K
Sbjct: 251 SIDQLLLLYQK 261
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 7/97 (7%)
Query: 395 VDESSEEEESNDEVRLWEDG----FKDRYYESKFDVPKDDIA--FRLMVGHEYVLGLCWV 448
V +++E E ++V L D + RYY+SKF + ++D F V ++Y+ GL WV
Sbjct: 526 VKKANECENPKEDVELGADDDPNDLRARYYKSKFHLDENDNVDEFVQEVVYKYIEGLAWV 585
Query: 449 LKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
L YY+Q C W WY+P++YAP +SD + I +++ +FE
Sbjct: 586 LCYYFQECPMWHWYYPYYYAPLSSDLL-IKDINISFE 621
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 31/37 (83%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
+SPIIDFYP+ FK + NGKKF +Q + LLPFV++ER+
Sbjct: 656 ESPIIDFYPKTFKEEENGKKFKYQWIVLLPFVEKERI 692
>gi|402582600|gb|EJW76545.1| hypothetical protein WUBG_12547, partial [Wuchereria bancrofti]
Length = 123
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/111 (74%), Positives = 97/111 (87%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL+RKYPSV+V VE+KP+++NG ++P ++ PNPN EFDNLYLDMNGIIH
Sbjct: 7 MGVPAFFRWLTRKYPSVVVDAVEEKPRDLNGIRVPVNTVDPNPNFQEFDNLYLDMNGIIH 66
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
PCTHPED+P PK E+EM + IFE IDRLF IVRPRKLLYMAIDGVAPRAK+
Sbjct: 67 PCTHPEDRPCPKTEEEMFMLIFEYIDRLFAIVRPRKLLYMAIDGVAPRAKV 117
>gi|154285288|ref|XP_001543439.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150407080|gb|EDN02621.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1327
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 137/218 (62%), Gaps = 26/218 (11%)
Query: 156 FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRK 215
FDSNCITPGT FMA+L+ L Y+I+ +++ D W+G++++LS VPGEGEHKIM+YIR+
Sbjct: 7 FDSNCITPGTEFMAKLTQQLKYFINKKVSEDVEWQGVEIVLSGHEVPGEGEHKIMEYIRQ 66
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF---KPNQARPCDVCGQMGH 272
+AQP + P+ +HCL G DADLIMLGL +H+P+F ++REE + +Q + ++ Q +
Sbjct: 67 SKAQPGYQPDIRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRQSQKKSKELEHQNFY 126
Query: 273 EMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDW 332
M C+ VR + E+ E E L FP+ ER +DD+
Sbjct: 127 LMHLCM----------------------VREYLELEFQELEEENA-LQFPFDLERVIDDF 163
Query: 333 VFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
+ M FFVGNDFLP+LP+L I EGA+ + +YK+ + K
Sbjct: 164 ILMAFFVGNDFLPNLPNLHINEGALAWMFKVYKQVLPK 201
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 395 VDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
V E++ EE + +E F K+ YY+SKF D+ + YV GL WVL Y
Sbjct: 372 VKETTAEEAQQAAEKKYELKFQEWKNNYYKSKFGWDMDNHEEMRQLTENYVQGLQWVLYY 431
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YY+G SW W++ +HY+P SD E D NF+ G QP
Sbjct: 432 YYRGVASWPWFYQYHYSPMISDVKLGLEADMNFDLG-QP 469
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A L+ EE+
Sbjct: 500 ESPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLSAMATKKHLLTPEEN 552
>gi|330804007|ref|XP_003289991.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
gi|325079889|gb|EGC33468.1| hypothetical protein DICPUDRAFT_80750 [Dictyostelium purpureum]
Length = 1065
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 149/290 (51%), Gaps = 37/290 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFRWL YP V+ + DK ++FDNLY+DMNG+IH
Sbjct: 1 MGIPLFFRWLVENYPKVLANGYIDK--------------------IQFDNLYIDMNGVIH 40
Query: 61 PCTHPED--------KPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMN 112
+ K KDED + +++ +D++ V P KLLY+ IDGV PRAK
Sbjct: 41 NSIKVDKRGKYGLIYKDDIKDED-IKQSVYWRLDQMILSVNPSKLLYIGIDGVPPRAKAV 99
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLS 172
+QR RRF++ KE+ I + + ++D + + + FDSN I+P T F+ +++
Sbjct: 100 EQRRRRFKSVKESKANILTELKKSKPYVSDEEL---SEIQSKVFDSNSISPATEFIEKIN 156
Query: 173 ACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ--PDHDPNTQHCL 230
+ Y P + ++LSD+ VPGEGEHKIMDYIR ++ + HC
Sbjct: 157 QWIKEYCEKLSTERP---SLTIVLSDSTVPGEGEHKIMDYIRSNHSKLIATGEKQLTHCF 213
Query: 231 CGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGL 280
G DADLI LGL TH PNF I+R+ + + CD + +E K +
Sbjct: 214 YGMDADLIFLGLETHLPNFYILRDSLHLLECKTCDSKDHLSYECKSAYAI 263
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 298 FIFVRLSVLREYLEKELAMPNLPF----PYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
F FV L R YLE L + N+ F R ++D +C +GNDF+PHLPS I
Sbjct: 603 FDFVNLDSFRLYLEYYL-LENIDQERREKVDFNRCINDITLLCTLLGNDFVPHLPSFLIS 661
Query: 354 EGAVDRLVNLYKKTVYKTQEQLRQE 378
G+++ + YK + K+ E + ++
Sbjct: 662 FGSLELTLCWYKDWIQKSIETITKD 686
>gi|345326399|ref|XP_003431040.1| PREDICTED: LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1-like
[Ornithorhynchus anatinus]
Length = 1614
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 139/242 (57%), Gaps = 32/242 (13%)
Query: 130 AEVARIREKLLADGCILPPEKEKGSH-FDSNCITPGTPFMARLSACLHYYIHDRLNNDPG 188
++V++ +K+ AD E SH F+ + GT FMARL L Y+++ +++ D
Sbjct: 7 SKVSKRTDKINADK-----HAEHISHQFNLTLLGWGTEFMARLHEHLKYFVNMKISTDKS 61
Query: 189 WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPN 248
W+G+ + LS PGEGEHKIM++IR ++A+ DHDPNT+HCL G DADLIMLGL +HE +
Sbjct: 62 WQGVTIYLSGHETPGEGEHKIMEFIRSEKAKKDHDPNTRHCLYGLDADLIMLGLTSHESH 121
Query: 249 FTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLRE 308
F+++REE + + + VC PE E F + LS++RE
Sbjct: 122 FSLLREEVRFSGKKTQRVCA-----------------PE-------ETTFHLLHLSLMRE 157
Query: 309 YLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKK 366
Y++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A+ L Y
Sbjct: 158 YIDYEFSVLKSKISFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYRTYMT 217
Query: 367 TV 368
T+
Sbjct: 218 TL 219
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 372 QEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPK 428
Q++L+ +EN K + S E+ ++ L+E F K YY +K V
Sbjct: 287 QKKLKSQENSICLAALNKTEGEATTSKSVLEDEPEDDDLFETEFRQYKRTYYMTKMGVEV 346
Query: 429 DDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
F Y+ + W+L YYY G +SW W++P+HYAP+ SD NI E FE G
Sbjct: 347 VSDEFLADQAECYIQAIQWILHYYYHGVQSWSWFYPYHYAPYLSDIRNIKEFKIQFELG 405
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 39/53 (73%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE RL +A+ P + L EE
Sbjct: 437 EDSPIIEYYPTDFKTDLNGKQQEWEAVVLIPFIDENRLLQAMEPCNKNLKKEE 489
>gi|123432925|ref|XP_001308510.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121890194|gb|EAX95580.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 966
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 137/475 (28%), Positives = 205/475 (43%), Gaps = 81/475 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV FF+WL +YPS+ SS +P+ FD ++D N IIH
Sbjct: 1 MGVAGFFKWLISRYPSICRGA----------------SSGISPS---FDCFFVDFNCIIH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
EDE++ + +D L +V+P KLLY+++DG AP AK +QRSRRF
Sbjct: 42 NAIRTIQGSKDLIEDELITEVLRFLDILVHVVQPTKLLYISVDGPAPLAKCIEQRSRRFS 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ KE F N IT GT FM L + Y+
Sbjct: 102 GQGK-------------------------KEVAEGFTKNSITIGTKFMNDLHLKILDYLK 136
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+R+N DP W +I + PGEGEHK++++IR QRAQ + + C+ DAD+ +
Sbjct: 137 ERVNRDPIWAMPHIIYDSYHTPGEGEHKLINFIRYQRAQGTWNEDYSCCIYSPDADIFFI 196
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
L TH I++ D G + D + N SV + +FI+
Sbjct: 197 ALNTHMKKIAILK-----------DSSGDLKLA-------DKKYNSASVRFWAG--DFIY 236
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
V LS+LR+ L E N DD+ + +GNDF+P P I D
Sbjct: 237 VYLSILRQLLAAEFFNSNEDM---VNNITDDFCAISSLLGNDFIPSFPFFNI-----DNF 288
Query: 361 VNLYKKTVYKTQEQLRQE---ENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKD 417
N + VY TQ + + ENG + DV + + E + + + +
Sbjct: 289 NNALE--VYFTQYLPKSKYIVENGEFNYSNLSDFLRDVAYNVGDAEKSVSKQQNLLSYAE 346
Query: 418 RYYESKFDVPKD---DIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
+ ++KF +P+ D + +V H + WVL Y +G SW+WY+P+ AP
Sbjct: 347 KNVQAKFALPEGPGFDEKIKEIVYH-VMDSFVWVLNLYTKGILSWEWYYPYSSAP 400
>gi|71407725|ref|XP_806311.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70870021|gb|EAN84460.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 979
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 154/325 (47%), Gaps = 93/325 (28%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++KYP ++ + P +V+G LY+D+NG+IH
Sbjct: 1 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + E+E + I ++ L VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSERDPSVAARPEEEKLQCICCEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 98
Query: 119 FRAS--------------------KETAEKIAEVARIREKLLADGC-------------- 144
+ + E AE ++ IR+ L+ D
Sbjct: 99 YMSRAKIMSSGTEVVEEVVREFTPNEMAEADDDLDDIRQLLMQDALYGGVMVQDDTTETL 158
Query: 145 ------------ILPPEKEKGSH----------------------FDSNCITPGTPFMAR 170
+ P + +H FDSNCI+PGT FM +
Sbjct: 159 NGVANIADSLTPVTPCHDKSNNHEAHAETWAAFDGLTDGTMEVTEFDSNCISPGTAFMVK 218
Query: 171 LSACLHYYIHDRLNN-DPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
++ + + D+L N DP W G++V+ S AN PGEGEHKI+D++R Q + P + H
Sbjct: 219 VTNAILTMVQDKLTNGDPLWAGLRVVFSGANTPGEGEHKIVDFLRTQSSYPGFNGKGAHV 278
Query: 230 LCGADADLIMLGLATHEPNFTIIRE 254
+ G DADLI L L+ H P+ ++R+
Sbjct: 279 IAGLDADLIFLSLSLHIPHILLLRD 303
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-------------YKTQ 372
+ +DD++ M +GNDFLP LP E +D L+ LY V Y Q
Sbjct: 470 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 529
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIA 432
Q +R ++ + +E + ++ ++ Y S + A
Sbjct: 530 LQRLLRSYAKIETVKFRRFALSNNKMTPKEAAEPLYSPLDEQWRQTYLTSTGLTGNLEEA 589
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFIN 476
+ +YV GL +V +YY SW WY+PFH+APFA D +
Sbjct: 590 CK-----KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIAD 630
>gi|407838780|gb|EKG00159.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative
[Trypanosoma cruzi]
Length = 1070
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 154/325 (47%), Gaps = 93/325 (28%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++KYP ++ + P +V+G LY+D+NG+IH
Sbjct: 92 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 129
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + E+E + I ++ L IVRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 130 PCCHSERDPSVAARPEEEKLQCICCEVEVLLAIVRPHDILYIATDGVAPRAKMNQQRARR 189
Query: 119 FRAS--------------------KETAEKIAEVARIREKLLADGC-------------- 144
+ + E AE ++ IR+ L+ D
Sbjct: 190 YMSRAKIMSSGTEVVEEVVREFTPNEMAEVDDDLDDIRQLLMQDALYGGVMFQDDTSETL 249
Query: 145 ------------ILPPEKEKGSH----------------------FDSNCITPGTPFMAR 170
+ P + +H FDSNCI+PGT FM +
Sbjct: 250 NGVANIADSLTPVTPCHDKSNNHEAHTEAWAAFDGLTDGTLEVTEFDSNCISPGTAFMVK 309
Query: 171 LSACLHYYIHDRL-NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+ + + D+L N DP W G++V+ S AN PGEGEHKI+D++R Q + P + H
Sbjct: 310 VKNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIIDFLRTQSSYPGFNGKGAHV 369
Query: 230 LCGADADLIMLGLATHEPNFTIIRE 254
+ G DADLI L L+ H P+ ++R+
Sbjct: 370 IAGLDADLIFLLLSLHIPHILLLRD 394
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 20/166 (12%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-------------YKTQ 372
+ +DD++ M +GNDFLP LP E +D L+ LY V Y Q
Sbjct: 561 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 620
Query: 373 EQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIA 432
Q +R ++ + +E + ++ ++ Y S + A
Sbjct: 621 LQRLLRSYAKIETVKFRRFALSNNKMTPKEAAGPLYSPLDEQWRQTYLTSTGLTGNLEEA 680
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFIN 476
+ +YV GL +V +YY SW W++PFH+APFA D +
Sbjct: 681 CK-----KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIAD 721
>gi|290992975|ref|XP_002679109.1| 5'-3' exoribonuclease [Naegleria gruberi]
gi|284092724|gb|EFC46365.1| 5'-3' exoribonuclease [Naegleria gruberi]
Length = 1047
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 192/406 (47%), Gaps = 68/406 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVE-DKPQEVNGQKIPFDSSKPNPNGMEF-----DNLYLD 54
MGVP F WL + + ++ + ++ KI + +K + + DN Y+D
Sbjct: 1 MGVPGFIYWL-------VTNVIDTNDKKDAADDKIVYPINKQSILVQDILKQRVDNFYID 53
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
+NG+IHPC HP+ P++ED+MM I + +L R V+P L Y+A+DGVAP AK QQ
Sbjct: 54 LNGLIHPCCHPQTGKKPENEDDMMKRITAELLQLARTVQPNNLFYIAVDGVAPAAKQEQQ 113
Query: 115 RSRRFRASKETAEKIAEVARI-------------------------REKLLADGCILPPE 149
R RRF A E +K+ + RI REKLL D I E
Sbjct: 114 RHRRFVAISENEQKLKFIGRIQSEITKEKDELTKEIKESEVDKIQQREKLL-DSAIARME 172
Query: 150 KEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKI 209
+K +H+D N I+PGTPFM + + +H P IKVI+SD++VPGEGEHKI
Sbjct: 173 AKK-NHWDHNVISPGTPFMMKCMSTVHQAAKLIATEFP---HIKVIVSDSSVPGEGEHKI 228
Query: 210 MDYIRKQRAQPDHD-PNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCG 268
+ Y+++++A + H + G DADLIML P R+
Sbjct: 229 LSYMKREKAINSKEFSEMLHVVHGLDADLIMLTSLIGLPKIFSYRDSENV---------- 278
Query: 269 QMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERA 328
+M KE + SE+ F R+ + E + + + +S
Sbjct: 279 RMNKRDKELFNI-------------SELGRHFARV-IYSSIAELDTSSKSQNIDWSNANF 324
Query: 329 LDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQ 374
+ D V + FVGNDFLP++PSL + A ++ Y K + + E+
Sbjct: 325 VSDVVLLLMFVGNDFLPNVPSLVMHNHAASIIMYSYAKYLLQCMEE 370
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 411 WEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYY-YQGCRSWKWYFPFHYAP 469
+ D YY KF + FR + EY+ G+ W YY Y SW W +P HYAP
Sbjct: 523 YTDEIHQEYYHKKFG--DSSLLFRKTLVKEYLRGIVWAFNYYSYNDPPSWYWRYPEHYAP 580
Query: 470 FASDFIN 476
D ++
Sbjct: 581 VMCDILD 587
>gi|323456482|gb|EGB12349.1| hypothetical protein AURANDRAFT_20690, partial [Aureococcus
anophagefferens]
Length = 186
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 123/189 (65%), Gaps = 3/189 (1%)
Query: 77 MMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIR 136
M+ I +DRL ++RP +Y A+DGVAPRAKMNQQR+RR+ A++E AE A +R
Sbjct: 1 MLRRIEAHLDRLMELMRPTAFVYFALDGVAPRAKMNQQRTRRYVAAQERAEAAAAEDALR 60
Query: 137 EKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVIL 196
++L A G P ++K + +D N ITPGT FM +L+ L Y R + P WK I +L
Sbjct: 61 DELAATG--QPAPEKKAAKWDHNVITPGTEFMRKLADFLRAYCARRARSHPRWKHISFLL 118
Query: 197 SDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF 256
SDA VPGEGEHKI+ Y+R R Q +DP TQHC+ G DADLIML LA HE NF ++R+
Sbjct: 119 SDATVPGEGEHKIISYVRALRQQEGYDPATQHCIVGEDADLIMLSLALHEENFLVLRKRM 178
Query: 257 KPNQARPCD 265
K +A CD
Sbjct: 179 K-WEAPECD 186
>gi|193784826|dbj|BAG53979.1| unnamed protein product [Homo sapiens]
Length = 805
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 117/199 (58%), Gaps = 26/199 (13%)
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
MARL L Y+++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+
Sbjct: 1 MARLHEHLKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTR 60
Query: 228 HCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
HCL G DADLIMLGL +HE +F+++REE + + VC PE
Sbjct: 61 HCLYGLDADLIMLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE 103
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLP 345
E F + LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+P
Sbjct: 104 -------ETTFHLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIP 156
Query: 346 HLPSLEIREGAVDRLVNLY 364
HLP L I A+ L Y
Sbjct: 157 HLPHLHINHDALPLLYGTY 175
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 398 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 450
>gi|62701868|gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
gi|77548751|gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 123/205 (60%), Gaps = 22/205 (10%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME----FDNLYLDMN 56
MGVP+F+RWL KYP+++ N SS NG + NLYLDMN
Sbjct: 1 MGVPSFYRWLVGKYPAIV--------SPANDDDDDVGSSS---NGAAAPPVYHNLYLDMN 49
Query: 57 GIIHPCTHPEDK-----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
GIIHPC HP+D+ P P +E+ ++F+ +DRL RIVRP LLY+A+DGVAPRAKM
Sbjct: 50 GIIHPCFHPQDQVCPPSPVPTTLEEVFHSMFDYMDRLIRIVRPTSLLYLAVDGVAPRAKM 109
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADG-CILPPEKEKGSHF-DSNCITPGTPFMA 169
NQQR+RRF+++ + E +R++ A+G +LP E S D N IT GT FM
Sbjct: 110 NQQRARRFKSAMAAKQAEVEENILRDRFRAEGKKVLPRETSSSSEVSDPNVITLGTEFMD 169
Query: 170 RLSACLHYYIHDRLNNDPGWKGIKV 194
+LS L YYI RLN+DP WK I V
Sbjct: 170 KLSDALKYYIRARLNSDPLWKDINV 194
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 119/187 (63%), Gaps = 14/187 (7%)
Query: 194 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR 253
VILSDANVPGEGEHKIM +IR QR + +DPNT+HCL G DADLIML LA+HE +F+I+R
Sbjct: 1535 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 1594
Query: 254 EEF--KPNQAR-----PCDVCGQMGHEMKECVGL---DAEPNPESVITFGSEVEFIFVRL 303
EE + NQ P Q + K C E PE +T + + F+ +
Sbjct: 1595 EEVLHQNNQENTIPITPKTFTSQEAEKFK-CRAWFPRITEARPEGKLT---KKPYQFLNI 1650
Query: 304 SVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNL 363
VLREYLE ++ +PN ER +DD+VF+CF GNDF+PH+PSLEI EGA+D L+ +
Sbjct: 1651 WVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEV 1710
Query: 364 YKKTVYK 370
YK + K
Sbjct: 1711 YKTSFNK 1717
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 19/93 (20%)
Query: 405 NDEVRLWEDGFKDRYYESKFDV-PKDDIA------------------FRLMVGHEYVLGL 445
+D+++L G+K R+++ KFD KD+IA + +Y+ GL
Sbjct: 1896 HDKIKLGSPGWKSRFFKEKFDAETKDEIAKLQNEMVTISCFLNYANGILYLTVQKYLEGL 1955
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASDFINIA 478
CWVL YY+ SW WY+PF+YAPFASD ++
Sbjct: 1956 CWVLCYYFADVPSWSWYYPFYYAPFASDVRGLS 1988
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I FYP + ID +GK++ WQG+A LPF++++ L + L+V E
Sbjct: 2005 ESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHE 2056
>gi|156086892|ref|XP_001610853.1| 5'-3' exonuclease [Babesia bovis T2Bo]
gi|154798106|gb|EDO07285.1| 5'-3' exonuclease, putative [Babesia bovis]
Length = 509
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 204/445 (45%), Gaps = 53/445 (11%)
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAP 107
D+LY+DMN +IH TH P + +E + I I+ +F IVRPRK+LYMA+DGV P
Sbjct: 26 DHLYMDMNAVIHVATHGNISPVVQMANEQRLRRITSAIEMMFDIVRPRKMLYMAVDGVCP 85
Query: 108 RAKMNQQRSRRFRASKET--AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGT 165
AK+NQQR RRF SK I + LP ++ F+ N I+PGT
Sbjct: 86 TAKINQQRGRRFLTSKNVDPLADICSAVSAEDGYTYIAKRLPFDEYDNVSFNPNYISPGT 145
Query: 166 PFMARLSACLHYYIHDRLNNDPGWKG-IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
FM + + + ++ L + G+ G V + VPGEGEHKI IRK
Sbjct: 146 DFMKIVDSEISNWL--ALKTEEGFFGKCMVTYNGVTVPGEGEHKIFQCIRKMNKVCKRSR 203
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREE--FKPN-----QARPCDVCGQMGHEMKEC 277
H + G DADL+ML +A PN ++REE + P+ + P + +
Sbjct: 204 KDVHLVYGLDADLMMLSMAVKMPNIKVLREERNYAPHVVSKKKGEPYFSTDTGIVHLHKW 263
Query: 278 VGLDAEPNPESVITFGSEVEFIFVRL--SVLREYLEKELAMPNLP-FPYSFERALDDWVF 334
+D + V + S + ++ R ++R+Y + N P PY R DD+V
Sbjct: 264 DFIDLKKTHFEVASLHSLRKRMYERCWGYIMRKYGPSSSSFLNRPEAPY---RITDDFVL 320
Query: 335 MCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQ------------------EQLR 376
+ F GNDFLP LP++++ + +++ Y ++K Q + L
Sbjct: 321 LSFLAGNDFLPRLPTVDLANDSFKQMLVTYYGLMHKWQGFLTDGSKIHVPRLQTLFKSLA 380
Query: 377 QEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM 436
+ E +G+ + V E S+ + + D Y+E+K V ++
Sbjct: 381 KHEMEWFKEKGI---IEGVPEYSDRKL-----------YADYYHENKCQVDSKANVKKMC 426
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKW 461
+ +Y+ GL W+L YY+ C SW W
Sbjct: 427 I--DYIKGLFWILIYYHHDCPSWDW 449
>gi|440298458|gb|ELP91094.1| 5'->3' exoribonuclease, putative [Entamoeba invadens IP1]
Length = 608
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 146/505 (28%), Positives = 228/505 (45%), Gaps = 89/505 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP+ F++L R P+ + FD S+PNPNG E+DNLY+D+NG+IH
Sbjct: 1 MGVPSLFKYLCRLVPNFTRRARWNDD---------FDFSQPNPNGREYDNLYIDLNGLIH 51
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
++ + ++ + I L IVRPR LL+++IDGV P AKM QQR RRF
Sbjct: 52 GSLDYTTI------EQTIESLNQKILELVSIVRPRSLLFISIDGVCPVAKMVQQRKRRFT 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
E D N ITPGT FM ++S + +I
Sbjct: 106 PDNE--------------------------------DGNKITPGTDFMEKISTGVESFIL 133
Query: 181 DRLNNDP--GWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
++NN ++ IK I+S + PGEGEHKI+++IR Q+ + H +CG DADL+
Sbjct: 134 SQMNNVGLDYFRRIKTIVSGVHSPGEGEHKIIEFIRSQKRVTE-----SHVICGEDADLL 188
Query: 239 MLGLATHEPNFTIIREEFKPNQ--ARPCDVCGQMGHEMKECVGLDAEPNPESVITFG-SE 295
+L L H N I+R+ P + +RP K+ +P V F
Sbjct: 189 LLSLTLHTDNIFILRKFTPPTKQYSRPKKNGHGHAKVAKDKSAKSEKPQKSDVQLFDFVN 248
Query: 296 VEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREG 355
+ + +L + + KE+ L +D+VF+ GNDF+P++P +++ G
Sbjct: 249 ITLLSNKLVSMSAEMGKEINRTQLE---------NDFVFLMSLAGNDFVPNVPGVDVYSG 299
Query: 356 AVDRLVNLYKKT----VYKTQ-------------EQLRQEENGGGGGRGVKRSFDDVDES 398
+ + Y K V+ T+ E+LR+ E R+ +
Sbjct: 300 SFKMALTCYFKLSSGGVFLTKNDDINFPAFKEFLEKLRENEEMMVKTMVRTRTTTCPGVT 359
Query: 399 SE-EEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+++N VR+ E ++ RY + F ++ + + EY+ G+ WV YY
Sbjct: 360 GYVTKDTNKLVRIGEANWRSRYEKVLFQSNEEYMKRGV---KEYIKGIVWVYLYYTGHPI 416
Query: 458 SWKW-YFPFHYAPFASDFINIAEVD 481
SW++ Y PF YAP + EVD
Sbjct: 417 SWEFGYRPF-YAPTLTMLNTYFEVD 440
>gi|154317858|ref|XP_001558248.1| hypothetical protein BC1G_02912 [Botryotinia fuckeliana B05.10]
Length = 185
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 122/204 (59%), Gaps = 32/204 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YPS+ Q + +IP EFD LYLDMNGIIH
Sbjct: 1 MGVPKFFRWMSERYPSI--------SQLIAENRIP-----------EFDCLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
CTH + A E++M +AIF I+ L+ ++P++L YMA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCTHKDSDDATFRMTEEQMFIAIFNYIEHLYGKIKPKQLFYMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
FR + +V REK + +G +P E FDSN ITPGT FM +L+ L Y+
Sbjct: 102 FRTA-------LDVENAREKAIKEGKEMPKE----DAFDSNSITPGTEFMQKLTLQLKYF 150
Query: 179 IHDRLNNDPGWKGIKVILSDANVP 202
I +++ D W+G +++LS VP
Sbjct: 151 IAKKISEDVDWQGTEIVLSGHEVP 174
>gi|297611272|ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 119/187 (63%), Gaps = 14/187 (7%)
Query: 194 VILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR 253
VILSDANVPGEGEHKIM +IR QR + +DPNT+HCL G DADLIML LA+HE +F+I+R
Sbjct: 824 VILSDANVPGEGEHKIMSFIRAQRGREGYDPNTRHCLYGLDADLIMLALASHEVHFSILR 883
Query: 254 EEF--KPNQAR-----PCDVCGQMGHEMKECVGL---DAEPNPESVITFGSEVEFIFVRL 303
EE + NQ P Q + K C E PE +T + + F+ +
Sbjct: 884 EEVLHQNNQENTIPITPKTFTSQEAEKFK-CRAWFPRITEARPEGKLT---KKPYQFLNI 939
Query: 304 SVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNL 363
VLREYLE ++ +PN ER +DD+VF+CF GNDF+PH+PSLEI EGA+D L+ +
Sbjct: 940 WVLREYLELDMKIPNPIQTLDVERMIDDFVFICFLTGNDFIPHIPSLEIHEGAIDLLIEV 999
Query: 364 YKKTVYK 370
YK + K
Sbjct: 1000 YKTSFNK 1006
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+S I FYP + ID +GK++ WQG+A LPF++++ L + L+V E
Sbjct: 1266 ESAIQAFYPSELDIDTDGKRYLWQGIAKLPFIEDKLLLSVTKTAEKDLAVHE 1317
>gi|223993125|ref|XP_002286246.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977561|gb|EED95887.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Query: 85 IDRLFR-IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADG 143
+DR+ IV+P++L+++AIDGVAPRAK+NQQRSRR+R+ E ++ + + +D
Sbjct: 8 LDRIVSDIVQPKQLVFLAIDGVAPRAKLNQQRSRRYRSGSEKEIEMHLMTLQPISINSDE 67
Query: 144 CILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPG 203
+ E F SNCITPGTPF+ + S + +I +L DP W + +I S +VPG
Sbjct: 68 SAELSQDENHG-FHSNCITPGTPFLYKCSQRILEFIRHKLQTDPKWHDLTIIFSGHDVPG 126
Query: 204 EGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
EGEHKIMD++R ++ +P +DPN +HC+ G D DL+MLGLATHEP+ ++REE
Sbjct: 127 EGEHKIMDFMRHEKNKPGYDPNLRHCIYGQDGDLVMLGLATHEPHLCLLREE 178
>gi|47198701|emb|CAF89019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 167 bits (422), Expect = 2e-38, Method: Composition-based stats.
Identities = 90/216 (41%), Positives = 119/216 (55%), Gaps = 42/216 (19%)
Query: 164 GTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANV---------PGEGEHKIMDYIR 214
GT FMARL L Y++H +L+ D W+ ++V LS V PGEGEHKIM++IR
Sbjct: 1 GTDFMARLQEQLEYFVHSKLSTDKLWQNVRVYLSGHEVRSQSTPTLTPGEGEHKIMEFIR 60
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEF----KPNQARPCDVCGQM 270
+ P HDPNT+HCL G DADLIMLGL +HEPNF+++REE K +Q R
Sbjct: 61 SENNGPGHDPNTRHCLYGLDADLIMLGLTSHEPNFSLLREEVRFGGKKSQKR-------- 112
Query: 271 GHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERA 328
IT E F + LS++REY++ E ++ +L Y ER
Sbjct: 113 -------------------ITAPEETTFHLLHLSLMREYIDYEFSVLRNHLGSTYDLERI 153
Query: 329 LDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
+DDW+ M F +GNDF+PHLP L I A+ L Y
Sbjct: 154 IDDWILMGFLIGNDFIPHLPHLHISHDALPLLYKTY 189
>gi|67583943|ref|XP_665025.1| CG10354-PA [Cryptosporidium hominis TU502]
gi|54655348|gb|EAL34795.1| CG10354-PA [Cryptosporidium hominis]
Length = 171
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 112/176 (63%), Gaps = 6/176 (3%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWL +YP ++ + +E + D ++PN NG EFD LYLDMNGIIH
Sbjct: 1 MGVPTFYRWLCNRYPLIVKELKDAIDEETCLNDL--DLTEPNING-EFDCLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC +P PKDE EM + + IDRL+ +V+PR+L+YMAIDGVAPRAKMNQQRSRR++
Sbjct: 58 PCCNPSGGDKPKDEAEMFTRVCDYIDRLYAMVKPRRLIYMAIDGVAPRAKMNQQRSRRYK 117
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
+ E +E+ G P EK +DSN ITPGTPFM RL+ CLH
Sbjct: 118 TALEMDYNRRAYEIAQEEFYKIGYKCPEYVEK---WDSNVITPGTPFMERLTMCLH 170
>gi|159474632|ref|XP_001695429.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
gi|158275912|gb|EDP01687.1| single-stranded RNA 5'->3' exonuclease [Chlamydomonas reinhardtii]
Length = 171
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 119/201 (59%), Gaps = 31/201 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F+RWLS +YP + QK+ P E DNLYLDMNGIIH
Sbjct: 1 MGIPKFYRWLSERYPLL-------------NQKLTLTEGPP-----EMDNLYLDMNGIIH 42
Query: 61 PCTHPEDKP-APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH K E++MM+ +F+ +D+L +IVRP+KLL+MAIDGVAPRAKMNQQRSRRF
Sbjct: 43 NCTHANRKDIGGVTEEDMMLKVFDYLDKLVQIVRPQKLLFMAIDGVAPRAKMNQQRSRRF 102
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+++ E + E R G ++P + FDSNCITPGT FMARL L ++I
Sbjct: 103 KSAMERLKNEEEQRR-------KGEVVPDDA-----FDSNCITPGTEFMARLGKHLRFFI 150
Query: 180 HDRLNNDPGWKGIKVILSDAN 200
++ DP W+ V+ S N
Sbjct: 151 RRKMAEDPLWQKPNVVFSGRN 171
>gi|281201939|gb|EFA76147.1| hypothetical protein PPL_10728 [Polysphondylium pallidum PN500]
Length = 2230
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 38/292 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIV-----------HCVEDKPQEVNGQKIPFDSSKPNPNGMEFD 49
MGVP+F++WL+ KYP + + ++ E + + +
Sbjct: 1 MGVPSFYKWLTEKYPKITCTNYLLENIENNNNNDNNNNENGNGNNNNNHGNKEKKKLRLN 60
Query: 50 NLYLDMNGIIHPCTHPEDKP--APKDEDEMM-VAIFECIDRLFRIVRPRKLLYMAIDGVA 106
NLY+DMNG+IH TH ++ +P + D++ + + + +D L V+P LLY+A+DGV
Sbjct: 61 NLYIDMNGVIHNSTHAKNSTTLSPVESDDVCRMNLLKNLDELVGTVQPTNLLYIAMDGVP 120
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
PRAK +QR RRFR++K+ + ++ ++L +D P FDSNCI+P T
Sbjct: 121 PRAKAIEQRKRRFRSAKDAKDALS------KRLPSDPVFEP--------FDSNCISPATE 166
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP-N 225
FM +++ + Y + P + +++SDA+VPGEGEHKI+D+IR R +H P +
Sbjct: 167 FMCKVNEWVLTYAQALVKRMP---SVSIVVSDASVPGEGEHKIIDFIRAHR---EHWPSD 220
Query: 226 TQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKEC 277
T H G DADLI LGL+T +F ++R+ C C GH EC
Sbjct: 221 TSHVFYGMDADLIFLGLSTQLSHFFVLRDL---GAQIYCSTCKNNGHLCYEC 269
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 291 TFGSEVEFIFVRLSVLREYLEKELAM---PNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
T + F FV L L+EY + ++ R ++D+ MC +GNDFLPHL
Sbjct: 550 TMRDDDSFDFVNLDYLKEYFRYSVLSGLSESVASRVDCNRMINDFTMMCMLLGNDFLPHL 609
Query: 348 PSLEIREGAVDRLVNLYKK--TVYKTQEQLRQEENGGGG--------------------- 384
P++ I+EG+++ ++ Y+ + +K + Q G
Sbjct: 610 PTMAIKEGSIELMMTWYRDWLSSFKDESSTIQYLTDGPNINYKPFHKLLLMLSKWESLYF 669
Query: 385 ----GRGVKRS---FDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLM- 436
+ K+ D++ ++S ES+ R DG YY+ K V D +
Sbjct: 670 PDKLEKMYKKEIFRLDNLLKTSPHLESH---RRNLDG-DINYYKLKIGVTIDKVEETAND 725
Query: 437 VGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPV 491
+ +V GL WVL+YY GC +W WY+P+HYAP SD E + T+ +
Sbjct: 726 ICKAFVDGLAWVLRYYTVGCPAWSWYYPYHYAPLISDLAKFVEKQSQVYNDTKHI 780
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYY-EKLSVEESE 718
+P+ + E F+ID NG++ +W+GV LL F++ L + +P ++LS EE E
Sbjct: 819 APLSRLFEERFRIDPNGEEVSWKGVVLLDFINTNVLKEHASPIIKDQLSAEELE 872
>gi|343424057|emb|CCD17964.1| 5'-3' exonuclease, putative [Trypanosoma vivax Y486]
Length = 996
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 156/329 (47%), Gaps = 80/329 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL KYP V+ + + P V+G LY+D+NG+IH
Sbjct: 1 MGVPKFASWLRNKYPDVVSN---NCPTSVHG-------------------LYVDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E+ P A E E + I ++ L VRP+++LY+A+DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSENDPSIALLPEGEKLECICYEVELLVETVRPQEVLYIAVDGVAPRAKMNQQRARR 98
Query: 119 F-------RASKE-----------------------TAEKIAE----VARIREKLLADG- 143
+ RA K T+++IAE + +R LL D
Sbjct: 99 YMSRAVPARADKSPSRASHAKNNRCADVVEEVVREFTSDEIAEANNDLNEVRNLLLQDSL 158
Query: 144 --------------CILPPEKEKGS------HFDSNCITPGTPFMARLS-ACLHYYIHDR 182
+ P + + FDSNCI+PGT FM++++ L +
Sbjct: 159 YGQPVPDASVGGNTTVFVPRSDTSTADISAVEFDSNCISPGTAFMSKVADKVLAMLQRNM 218
Query: 183 LNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGL 242
++D W + VI SD+ PGEGE KI+D++R Q + P + H + G DADLI L L
Sbjct: 219 TSDDSKWSRLCVIFSDSRTPGEGEQKIIDFLRTQSSYPGFNGRGSHVIVGLDADLIFLAL 278
Query: 243 ATHEPNFTIIREEFKPNQARPCDVCGQMG 271
+ H P TI+R+ + R Q G
Sbjct: 279 SLHIPGVTILRDTTRNPHKRRAAAQQQRG 307
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 76/202 (37%), Gaps = 64/202 (31%)
Query: 320 PFP-YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY-------------- 364
PF ++ + +DD + + +GNDF+PHLPS E A+D + LY
Sbjct: 459 PFSSFANSKVIDDIILIAMLMGNDFIPHLPSAFCGESALDNFLELYVTDVLPYGFLTIDS 518
Query: 365 -------------------------KKTVYKTQEQLRQEENGGGGGRG------VKRSFD 393
K + + +R+EE G G G V R+ +
Sbjct: 519 YEISLPQLRRLLESYAKIEAVLFRRHKLLADADQNVRREEAGTGTGVSDGDLMTVSRAAE 578
Query: 394 DVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYY 453
++ S + N L G +R +E+ YV GL +V +YY
Sbjct: 579 PLNSSVDVGWRN--AYLSTTGLSERVHEA---------------CEAYVNGLRFVWRYYT 621
Query: 454 QGCRS-WKWYFPFHYAPFASDF 474
+ W WY+PFH+ P A D
Sbjct: 622 SSSGTCWSWYYPFHHGPLALDM 643
>gi|84998436|ref|XP_953939.1| 5'-3' exoribonuclease (XRN2, DHM1 ) [Theileria annulata]
gi|65304937|emb|CAI73262.1| 5'-3' exoribonuclease (XRN2, DHM1 homologue), putative [Theileria
annulata]
Length = 619
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 227/531 (42%), Gaps = 90/531 (16%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
GVP + W+ + V +IP D S+ + D Y+DMN +IH
Sbjct: 79 GVPRLYGWMMENFSRV---------------RIPLDDSEISKG---VDYFYVDMNAVIHS 120
Query: 62 CTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
TH P ED+ M I + F +V+P+K++Y+ +DGV P AK+NQQR+RRFR
Sbjct: 121 ATHGNIFPILMMEDQQRMRRIVAALLNTFNLVKPKKMMYIGVDGVCPSAKINQQRTRRFR 180
Query: 121 ASKETAEKIAEVARIRE-KLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
K + E ++ + K+ L F+ + I+PGT FM+ + + + +I
Sbjct: 181 LYKSSNSD-NEYYKVEDGKMKYKVNKLKIGAYDNVSFNPSYISPGTQFMSMMDSEIRNWI 239
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+ N + W ++ + +VPGEGEHKI D IRK N+ H + G DADL+M
Sbjct: 240 ALQ-NYEGTWNDCYIVYNGTDVPGEGEHKIYDTIRKMLELDPDVRNSTHLVYGLDADLVM 298
Query: 240 LGLATHEPNFTIIREEFK------------PNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
L L T P I+REE+ P ++ + G + +D + N
Sbjct: 299 LSLITKLPKMYILREEYSYTPHILSKEKPDPYYSKKTGLLHIHGKDF-----IDLKSNNY 353
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVG-NDFLPH 346
V++ + ++ R + ++ +L L P + R DD+ + F G NDFLPH
Sbjct: 354 EVLSMNLLRKTMYSRCMSISGSVKNDLNR-FLFIPNAKNRLTDDFSLLSFMAGRNDFLPH 412
Query: 347 LPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGV------KRSFDDVDESSE 400
LPS+E+ + + L+N+Y K + K + L + K+ FD S
Sbjct: 413 LPSVELCNSSFNDLINMYYKMLPKLRGFLTLNYKINMSRLQLLMKELCKKEFDYFKMKSV 472
Query: 401 EEESNDEVRLWED--GFKDRYYESKFDVP-KDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
E+ +D + D + YYE+K D+ + A R M
Sbjct: 473 SEKISD----YSDPKKYAKYYYENKCDIDFNNKKAIRKMC-------------------- 508
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETG-----------TQPVNNNRIL 497
+ +HYAP SD I+ F G P NN+++L
Sbjct: 509 -----YKYHYAPLVSDLAKISGTTIKFYKGEPITPLEHLLAITPPNNSQLL 554
>gi|7509723|pir||T26774 hypothetical protein Y39G8C.b - Caenorhabditis elegans
Length = 1801
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 122/214 (57%), Gaps = 32/214 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW S +YP C+ + +N +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWTSERYP-----CLSEV---INESQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D EDE+ V IF I+ L+ ++RP+K+ +MA+DGVAPRAKMNQQR+RR
Sbjct: 42 NCSHPNDDDVTFRITEDEIFVNIFAYIENLYNLIRPQKVFFMAVDGVAPRAKMNQQRARR 101
Query: 119 FRASKE---TAEKIAEVARIRE----KLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
F +E +K AR K L +G I+P E + FDSNCITPGT FM RL
Sbjct: 102 FMYVEELLLAGKKEIWSARTAHTQLAKALENGEIMPSE----ARFDSNCITPGTYFMTRL 157
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
L +I + D W+G K+ILS N G
Sbjct: 158 HQKLDDWIKTKSATDSRWQGRKIILSGHNQKKSG 191
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 103/170 (60%), Gaps = 17/170 (10%)
Query: 201 VPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
VPGEGEHKIMD+IR +RA +DPNT+HC+ G DADLIMLG+ +HEP+F+++REE N
Sbjct: 269 VPGEGEHKIMDFIRTERAGSSYDPNTRHCMYGLDADLIMLGIVSHEPHFSLLREEVTFN- 327
Query: 261 ARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELA--MPN 318
RP + + K T +F + LS+LREYL E A +
Sbjct: 328 TRPRKNDNKATKKPKR--------------TDSDVKKFHLLHLSLLREYLAWEFADVKDS 373
Query: 319 LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
LPF Y ER +DDW+ + VGNDFLPHLP++ I + A+ L + YKK +
Sbjct: 374 LPFEYEMERIVDDWILLGLLVGNDFLPHLPNIHIHDDALPLLYSTYKKVL 423
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 663 PQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
P SPI DFYP +F+ DLNGK+ W+ V L+PF++E+RL +A+ +L+ EE+
Sbjct: 696 PAKSPICDFYPANFETDLNGKRNEWEAVVLIPFIEEKRLLEAIEAKRSRLTSEEN 750
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 404 SNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHE-------YVLGLCWVLKYYYQGC 456
+ND W +++ K D + ++ + + YV + W L YYY GC
Sbjct: 573 ANDVEACWTKTINNQFKRHKKTYYSDKLRYKNISKQQLREQAEGYVRAIQWNLHYYYHGC 632
Query: 457 RSWKWYFPFHYAPFASDFINIAEVDTNFE 485
SW W++P HYAPF SD + FE
Sbjct: 633 VSWSWFYPHHYAPFISDVRGFVGMRMEFE 661
>gi|290992973|ref|XP_002679108.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
gi|284092723|gb|EFC46364.1| 5'-3' exoribonuclease 1 [Naegleria gruberi]
Length = 968
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 195/413 (47%), Gaps = 60/413 (14%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNG-MEFDNLYLDMNGII 59
MGVP F +L + P +I + IP S+ + N M D+LYLDMNGII
Sbjct: 1 MGVPFLFSFLLSECPEMI------------KEIIPSSSASSSSNTTMTIDHLYLDMNGII 48
Query: 60 HP-------------------------CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRP 94
H ++ E+ P ++ + +I ++ + RP
Sbjct: 49 HTFKDTNLQTKLLERLVSSSSSSSSSSSSNNEEVEIPMTMEKFIFSILLYLEEVIYRFRP 108
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRA--------SKETAEKIAEVARIREKLLADGCIL 146
K L A+DG AP AK+NQQR RR+ + + + L G
Sbjct: 109 SKTLMFALDGSAPCAKINQQRERRWVSFNNHSGLPKRHHHHHQHGNHHGEQHDLHHGEEN 168
Query: 147 PPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIK-VILSDANVPGEG 205
+KE S FDS IT GT FM LS L ++I +L +DP W+ I+ +I SD++V GEG
Sbjct: 169 RKKKEDESLFDSISITSGTSFMKELSEHLQFFIKRKLQDDPNWRNIENIIFSDSSVFGEG 228
Query: 206 EHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
EHKIM +IRK + P+ + + + G D+DLI+L L THE + ++R ++ P+ + D
Sbjct: 229 EHKIMSHIRKVQQIPNR-KSEKFMIYGMDSDLILLSLVTHEEDIYVLR-DWMPSVS---D 283
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGSEVE--FIFVRLSVLREYLEKELAMP-NLPFP 322
Q+ K + N S + F V +S++R+ +EK + N
Sbjct: 284 SFNQVYSRWKVRRNFKKKSNSSSRTVDKDRFDHKFHLVEISLVRKLIEKYMRQDLNSSIE 343
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEI--REGAVDRLVNLYK---KTVYK 370
+ R +DD++ M F GNDF+ LP+L+I E A+ L +Y+ TV+K
Sbjct: 344 FDLNRVIDDFILMLFVCGNDFISSLPTLDIGKDENALGYLFKVYRTLFSTVFK 396
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 413 DGFKDRYYESKFDVPKDDIA------FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+ +K YY K ++ D + R +V EY+ + W YYY G SW++ + FH
Sbjct: 718 EKWKVNYYSRKLNITYDSSSKGGGPQVRELVK-EYLKAMYWTFYYYYFGVPSWEYSYNFH 776
Query: 467 YAPFASDFINIAEVDT 482
YAP ASDF+N+ E+ T
Sbjct: 777 YAPAASDFVNLKELFT 792
>gi|221055850|ref|XP_002259063.1| 5'-3' exoribonuclease [Plasmodium knowlesi strain H]
gi|193809134|emb|CAQ39836.1| 5'-3' exoribonuclease, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 42/258 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
G+P ++WL+ YP+V ++ +GQK E D Y+DMNG+IH
Sbjct: 61 FGIPRMYKWLTSYYPTV-----REELMTNDGQK-------------EVDIFYVDMNGVIH 102
Query: 61 PCTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH + P DE E++ I + + LF +V+PRKL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 103 HCTHANKETLPVHDEHELLSNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRF 162
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ + ++ ++G L F+ NCIT GT FM +++ L+ +
Sbjct: 163 LSLFKVSDN------------SNGTNL---------FNPNCITTGTDFMYKINLSLNKWF 201
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
++ VI S ++VPGEGEHKI+ +IR+ + N HC+ G DADLIM
Sbjct: 202 --QILKKKEIFPFDVIFSGSDVPGEGEHKILKFIRENCKRDVAFRNYSHCIYGLDADLIM 259
Query: 240 LGLATHEPNFTIIREEFK 257
L L TH N I+R+++K
Sbjct: 260 LSLVTHLNNIFILRDKYK 277
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGG 382
++ R +DD VF+ F VGNDFLP +P ++I EG+++ ++N Y +Y+ + ++
Sbjct: 396 FNISRVVDDIVFLSFLVGNDFLPQIPHIDINEGSMNEILNAYIYYIYRYNNYITLKDKVH 455
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWE----DGFKDRYYESKFDVPKDDIAFRLMVG 438
+ E S + +E + E +K YY KF V +D +
Sbjct: 456 IQRLKIILKILSAQEFSYFLKRGNEENILEFTDERRYKSYYYLQKFGV--EDPKQIQHIV 513
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+Y+ GL W L YY+ GC SW W +P+HYAP SD ++ + D FE G
Sbjct: 514 KKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKG 562
>gi|258597213|ref|XP_001347750.2| exonuclease, putative [Plasmodium falciparum 3D7]
gi|254832599|gb|AAN35663.2| exonuclease, putative [Plasmodium falciparum 3D7]
Length = 734
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 42/257 (16%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
G+P ++WL+ YP+V + ++ Q+ D Y+DMNG+IH
Sbjct: 46 GIPRMYKWLTSYYPTVREELINNEKQK------------------SVDIFYIDMNGVIHH 87
Query: 62 CTHPEDKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
CTH + P DE E+ I + + LF +++P+KL+Y+ +DGV+P+AKMNQQR RRF
Sbjct: 88 CTHANKEKLPIYDEHELFSNILQYLKNLFYLIKPKKLIYIGVDGVSPKAKMNQQRKRRFL 147
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ + +I + + F+ NCIT GT FM +++ L+ +
Sbjct: 148 S----------IFKIND-----------NDNTSNLFNPNCITTGTDFMYKINLSLNKWFK 186
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
VI S ++V GEGEHKI+ YIR+ + + N HC+ G DADLIML
Sbjct: 187 ILKKKKVF--EFDVIFSGSDVAGEGEHKILKYIRENCKRDSNFKNYNHCIYGLDADLIML 244
Query: 241 GLATHEPNFTIIREEFK 257
L TH N I+R++FK
Sbjct: 245 SLVTHLNNIFILRDKFK 261
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 91/183 (49%), Gaps = 34/183 (18%)
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQ-------- 374
+S R +DD VF+ F VGNDFLPH+P+++I EG+++ ++N Y +YK
Sbjct: 472 FSISRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYIYKYSNYITYKDKVH 531
Query: 375 ----------LRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKF 424
L +E RG+ +++ E ++E++ L + G +D
Sbjct: 532 IERLKIILKILSAQEFEYFKKRGIN---ENISEFTDEQKYKKYYYLHKFGLED------- 581
Query: 425 DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNF 484
PK+ + +Y+ GL W L YY+ GC SW W +P+HYAP SD ++ + D F
Sbjct: 582 --PKE----IQNIVKKYIEGLFWNLHYYHFGCASWYWEYPYHYAPLCSDLLSFEKSDFFF 635
Query: 485 ETG 487
E G
Sbjct: 636 EKG 638
>gi|330837844|ref|XP_003292059.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
gi|325077732|gb|EGC31426.1| hypothetical protein DICPUDRAFT_24625 [Dictyostelium purpureum]
Length = 126
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 96/125 (76%), Gaps = 3/125 (2%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+PAFFRWL KY +I E P+E +G + D ++ NPNG E+DNLYLDMNGIIH
Sbjct: 1 MGIPAFFRWLIDKYGGLIQETTE--PREGDGSRSKVDFTEMNPNG-EYDNLYLDMNGIIH 57
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE P P+ D+M+ +I+E +D LF I+RPRKL+YMA+DGVAPRAKMNQQR+RRFR
Sbjct: 58 PCAHPEKGPKPQSVDDMIQSIYEYLDLLFAIIRPRKLIYMAVDGVAPRAKMNQQRTRRFR 117
Query: 121 ASKET 125
A+ ++
Sbjct: 118 AALDS 122
>gi|385303536|gb|EIF47602.1| 5 -3 exoribonuclease 1 [Dekkera bruxellensis AWRI1499]
Length = 174
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 119/194 (61%), Gaps = 31/194 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S ++P QEV+GQ++ +EFDN+YLDMN I+H
Sbjct: 1 MGIPKFFRFISERWPLT--------SQEVDGQEM-----------IEFDNMYLDMNSILH 41
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
CTH D E++M AIF ID LF +++P+K+ YMAIDGVAPRAKMNQQR+RRF
Sbjct: 42 NCTHTNDGTIIHLSEEQMFGAIFAYIDHLFNLIKPKKVFYMAIDGVAPRAKMNQQRARRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
R++ E + +K + G +P E + FDSN ITPGT FMA+++ L YYI
Sbjct: 102 RSAVEAEXNM-------KKAIERGDEIPKE----APFDSNAITPGTDFMAKVTEHLKYYI 150
Query: 180 HDRLNNDPGWKGIK 193
+ +++ D W+ I+
Sbjct: 151 NQKVSTDSNWQSIQ 164
>gi|71033443|ref|XP_766363.1| 5'-3' exonuclease [Theileria parva strain Muguga]
gi|68353320|gb|EAN34080.1| 5'-3' exonuclease, putative [Theileria parva]
Length = 534
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 153/334 (45%), Gaps = 43/334 (12%)
Query: 45 GMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAID 103
G D Y+DMN +IH TH P ED+ M I + F++V P+K++Y+ +D
Sbjct: 62 GRGVDYFYVDMNAVIHSATHGNLFPVLMMEDQQRMRRIVTAMLNTFKLVNPKKMMYIGVD 121
Query: 104 GVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITP 163
GV P AK+NQQR+RRFR K ++ ++ L F+ + I+P
Sbjct: 122 GVCPSAKINQQRTRRFRLYKSSSSDNEYYKGENGEMKYKVNKLKVGAYDNVTFNPSYISP 181
Query: 164 GTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHD 223
GT FM+ + + + +I + N + W ++ S +VPGEGEHKI D IRK D+
Sbjct: 182 GTQFMSMMDSEIRNWIALQ-NYEGTWNDCYIVYSGTDVPGEGEHKIYDTIRKMVELDDNV 240
Query: 224 PNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE 283
+ H + G DADL+ML L T P I+REE H + +
Sbjct: 241 KKSTHLVYGLDADLVMLSLITKLPKMYILREE----------------HNFTPHILSKEK 284
Query: 284 PNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDF 343
PNP F E + +F Y D+ + F GNDF
Sbjct: 285 PNP----YFSKETDHVFKVYESFWNY---------------------DFSLLSFMAGNDF 319
Query: 344 LPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQ 377
LPHLP++E+ + + L+N+Y K + K + L Q
Sbjct: 320 LPHLPTVELCNSSFNDLINMYYKMLPKLRGFLTQ 353
>gi|403221200|dbj|BAM39333.1| 5'-3' exoribonuclease 1 [Theileria orientalis strain Shintoku]
Length = 642
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 181/389 (46%), Gaps = 45/389 (11%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
GVP + W+ + + +IP S + D Y+DMN +IH
Sbjct: 88 GVPRLYGWMMENFSKM---------------RIPLQDSDIYG---KVDYFYVDMNAVIHA 129
Query: 62 CTHPEDKPAPKDEDEM-MVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
TH P+ ED+ M I + ++F++V+P+K++Y+ +DGV P AK+NQQR+RRFR
Sbjct: 130 ATHGNVSPSLMMEDQQRMRRIVTALLKIFKLVKPKKMMYIGVDGVCPSAKINQQRTRRFR 189
Query: 121 ASKETAEKIAEVARIREKLLADGCI--LPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
K T + + E+ + + LP + FD + I+PGT FM+ + + L +
Sbjct: 190 LYKSTTKPGFKPYYKSEEGKYEYTVKKLPIQSYDNVSFDPSYISPGTEFMSMMDSELRNW 249
Query: 179 IHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLI 238
I + + W+ ++ S +VPGEGEHKI D IR+ H + G DADL+
Sbjct: 250 IALQ-TYEGTWEDRYIVYSGTDVPGEGEHKIYDAIRRMAECDPKVKQENHLVYGLDADLM 308
Query: 239 MLGLATHEPNFTIIREEF----------KPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
ML L T PN I+RE++ KPN + H M +D + +
Sbjct: 309 MLSLITKMPNMYILREKYDHAPHKLAKIKPNPYYSKETGLLHFHGMDY---IDFKISDYE 365
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFF---------V 339
V++ ++ R E + + A L S R DD+ + F V
Sbjct: 366 VLSMRFLRRIMYSRCIRTSEAVSND-ANKFLFNQNSRNRLTDDFSLLSFLAVDKLCTTNV 424
Query: 340 GNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
GNDFLPHLP++E+ + + LVN Y K +
Sbjct: 425 GNDFLPHLPTVELCNSSFNDLVNTYYKML 453
>gi|242070073|ref|XP_002450313.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
gi|241936156|gb|EES09301.1| hypothetical protein SORBIDRAFT_05g003583 [Sorghum bicolor]
Length = 555
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 154/328 (46%), Gaps = 84/328 (25%)
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREE-FKPNQARPCDVCGQ----MGHEMKECVGLD 281
HCL G DADLIML LA+HE +F+I+RE+ + Q C + ++C G
Sbjct: 1 NHCLYGLDADLIMLALASHELHFSILREDVLRSTQPENCIPLSKELFKTEDSSRKCRGW- 59
Query: 282 AEPNPESVITFGS-----EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMC 336
P T S + + F+ + VLREYLE +L +PN ER +DD++F+C
Sbjct: 60 ---FPRMTETTASRDRSPKKPYQFLNIWVLREYLELDLKIPNPVVKTDIERLIDDFIFIC 116
Query: 337 FFVGNDFLPHLPSLEIREGAVDRLVNLYKKT-------VYKTQEQLRQ------------ 377
F GNDF+PH+PS+EI EGA+D L+ +YK+ + T+++L++
Sbjct: 117 FLTGNDFIPHIPSVEIHEGAIDLLLEVYKQAFNKMGGYIVSTEKRLQRNLVRRAAEEWKE 176
Query: 378 ------EENGGGGGRGVKRSFDD--------VDESSEEEESN------------------ 405
EEN G VK S + V ++ E N
Sbjct: 177 RNYDNMEENPDGPDLTVKSSSTNGGICTNSQVTANTLELRRNLKDTLRNKQDLVKSGACK 236
Query: 406 -DEVRLWEDGFKDRYYESKFDVPKDDIAFRLM------------------VGHEYVLGLC 446
D +RL G+K R++ KF V K + +L V +Y+ GLC
Sbjct: 237 HDAIRLGFAGWKSRFFREKFGVEKSNEVGKLKNDMVMIFSCLCANKILIPVVQKYLEGLC 296
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDF 474
WVL+YY+ SW WY+PF+YAPF SDF
Sbjct: 297 WVLRYYFADVPSWSWYYPFYYAPFTSDF 324
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
++S I FYP D +ID +GK+F WQG+A+LPF+DE+ L A +KL+V E
Sbjct: 344 EESLIKKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLTSATKTVEDKLAVHE 396
>gi|156098318|ref|XP_001615191.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804065|gb|EDL45464.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 587
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 134/252 (53%), Gaps = 42/252 (16%)
Query: 7 FRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE 66
++WL+ YP+V + ++ GQK + D Y+DMNG+IH CTH
Sbjct: 2 YKWLTSYYPTVREELITNE-----GQK-------------DVDIFYVDMNGVIHHCTHAN 43
Query: 67 DKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKET 125
+ P DE E++ I + + LF +V+PRKL+Y+ +DGV+P+AKMNQQR RRF + +
Sbjct: 44 KETLPVHDEHELLTNILKYLKNLFHLVKPRKLVYVGVDGVSPKAKMNQQRKRRFLSLFKV 103
Query: 126 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNN 185
++ F+ NCIT GT FM +++ L+ + ++
Sbjct: 104 SDN---------------------SNSAHLFNPNCITTGTDFMYKINLALNKWF--QILK 140
Query: 186 DPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATH 245
G VI S ++VPGEGEHKI+ +IR+ + N HC+ G DADLIML L TH
Sbjct: 141 KKGIFPFDVIFSGSDVPGEGEHKILKFIREHCKRDGAFRNYSHCIYGLDADLIMLSLVTH 200
Query: 246 EPNFTIIREEFK 257
+ I+R+++K
Sbjct: 201 LNSIFILRDKYK 212
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 6/169 (3%)
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGG 382
++ R +DD VF+ F VGNDFLPH+P+++I EG+++ ++N Y +YK + ++
Sbjct: 335 FNISRVVDDIVFLSFLVGNDFLPHIPNVDINEGSMNEILNAYIFYIYKYGNYITLKDKVH 394
Query: 383 GGGRGVKRSFDDVDESSE-EEESNDE-VRLWED--GFKDRYYESKFDVPKDDIAFRLMVG 438
+ E S + NDE VR + D +K YY KF V +D +L+V
Sbjct: 395 IQRLKIILKILSAQEFSYFLKRGNDENVREFTDERTYKGYYYLQKFGV-EDPQQIQLIVN 453
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+Y+ GL W L YY+ GC SW W +P+HYAP SD ++ + D FE G
Sbjct: 454 -KYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKG 501
>gi|407400385|gb|EKF28636.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 1026
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 154/325 (47%), Gaps = 93/325 (28%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++KYP ++ + P +V+G LY+D+NG+IH
Sbjct: 48 MGVPKFALWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 85
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + E+E + I ++ L VRP +LY+A DGVAPRAKMNQQR+RR
Sbjct: 86 PCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 145
Query: 119 F--RASKET--AEKIAEVAR----------------IREKLLAD---GCIL----PPEKE 151
+ RA T A + EV R IR+ L+ D G ++ E
Sbjct: 146 YMNRAKIMTSGAAIVEEVVREFTPNEMAEVDDDLDDIRQLLMQDALYGGVMFQEDTTETL 205
Query: 152 KGSHFDSNCITPGTP-----------------------------------------FMAR 170
G ++ +TP TP FMA+
Sbjct: 206 NGVANIADTLTPVTPCNDKSQNDEIVAGASAKFDGRTDGTLEVTEFDSSCISPGTAFMAK 265
Query: 171 LSACLHYYIHDRL-NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
++ + + D+L N +P W G++V+ S A+ PGEGEHKI+D++R Q + P + H
Sbjct: 266 VTNAILTLVQDKLANGEPLWAGLRVVFSGASTPGEGEHKIIDFLRTQSSYPGFNGKGAHV 325
Query: 230 LCGADADLIMLGLATHEPNFTIIRE 254
+ G DADL+ L L+ H P+ I+R+
Sbjct: 326 IVGLDADLVFLSLSLHIPHIFILRD 350
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQ-----------EQL 375
+ +DD++ M +GNDFLP LP E +D L+ LY V QL
Sbjct: 518 KVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSHVLPYGFLTSGYHEIYLPQL 577
Query: 376 RQEENGGGGGRGVK-RSFDDVDESSEEEESNDEV-RLWEDGFKDRYYESKFDVPKDDIAF 433
++ VK R F ++ +E+ + + ++ +++ Y S + A
Sbjct: 578 QRLLRSYAKIETVKFRRFAVSNKKMTPKEAAEPLYSPLDEQWREPYLTSTGLAGNLEEAC 637
Query: 434 RLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFIN 476
+ +YV GL +V +YY SW WY+PFH+APFA D +
Sbjct: 638 K-----KYVEGLRFVWRYYSGNASTCSWSWYYPFHHAPFALDIAD 677
>gi|66804489|ref|XP_635977.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
gi|60464324|gb|EAL62473.1| hypothetical protein DDB_G0289921 [Dictyostelium discoideum AX4]
Length = 1235
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 149/310 (48%), Gaps = 63/310 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P+F+RWL +P V+ +NG+ ++F+NLY+DMNG++H
Sbjct: 1 MGIPSFYRWLIENFPKVL-------ENNLNGE-------------IKFNNLYIDMNGVVH 40
Query: 61 PC--------------------------THPEDK------PAPKDEDEMMVAIFECIDRL 88
T+ +DK + ++++ IF +D++
Sbjct: 41 NAIKLDHSPTSSSSSSSTTTTPPTTPTTTYSKDKEVVLMLKSELSDEKLKERIFYRLDQM 100
Query: 89 FRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPP 148
V P LLY+ +DGV PRAK +QR RRF++SKET + I + + + K + I+
Sbjct: 101 VNNVNPSSLLYIGVDGVPPRAKAIEQRKRRFKSSKETVDVIIKQLKSKSKPITRDSII-- 158
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
++ FDSN I+P T F+ ++ + Y + + +ILSD+ VPGEGEHK
Sbjct: 159 -EQFSLIFDSNSISPATEFIEKVDDWIKDYCKQL---SLKRQNLSIILSDSTVPGEGEHK 214
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVC- 267
IMDYIR+ D HC G DADLI LGL +H NF I+R+ P C C
Sbjct: 215 IMDYIRQNHPILKKD-GMSHCFYGMDADLIFLGLESHLSNFYILRD---PISLISCSTCK 270
Query: 268 GQMGHEMKEC 277
H EC
Sbjct: 271 ANDDHSNYEC 280
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 110/217 (50%), Gaps = 38/217 (17%)
Query: 298 FIFVRLSVLREYLEK---ELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
F +V + R YLE E + +F R ++D+ +CF++GNDFLPHLPS+ I+
Sbjct: 616 FDYVNIDSFRTYLEYYFFEKIEKSKREKINFNRVINDFTVLCFYLGNDFLPHLPSVGIQS 675
Query: 355 GAVDRLVNLYKKTV-----------YKTQEQ---------------LRQEENG---GGGG 385
G+++ ++ Y++ + Y EQ L E+
Sbjct: 676 GSIELIMCWYREWIQNCLNGDDDIKYIVNEQSTHLNFENCLPLLESLADWESSLYPENLE 735
Query: 386 RGVKRSFDDVDESSEEEESNDEVRLWEDGFKDR--YYESKFDV--PKDDIAFRLM--VGH 439
+ VK+ F V+++S ES+ V + + D YY KFD+ DD +L+ + +
Sbjct: 736 KQVKKDFIKVNKNSTSNESSSIVMVPPEFKYDDLLYYRVKFDLIGKPDDQVKKLVDDMCY 795
Query: 440 EYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFIN 476
+Y LGL WVL+YY GC++W WY+P+HYAP A D +N
Sbjct: 796 QYTLGLHWVLRYYVSGCQAWDWYYPYHYAPLAKDLLN 832
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 654 SFIPGG--QFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAP 707
+F+P ++SP Y +D+K D NG+ AW+ + LL F+D E+ + L P
Sbjct: 874 AFLPDSMKHIVNENSPFTASYRDDYKYDFNGENVAWKAIVLLDFMDIEKFKEYLLP 929
>gi|389583613|dbj|GAB66347.1| 5'-3' exoribonuclease [Plasmodium cynomolgi strain B]
Length = 638
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/254 (35%), Positives = 137/254 (53%), Gaps = 46/254 (18%)
Query: 7 FRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPE 66
++WL+ YP+V + ++ Q+ E D Y+DMNG+IH CTH
Sbjct: 2 YKWLTSYYPTVREELINNERQK------------------EVDIFYVDMNGVIHHCTHAN 43
Query: 67 DKPAP-KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKET 125
+ P DE E++ I + + LF +V+P+ L+Y+ +DGV+P+AKMNQQR RRF + +
Sbjct: 44 KETLPVHDEHELLSNILKYLKNLFHLVKPKNLVYVGVDGVSPKAKMNQQRKRRFLSLFKV 103
Query: 126 AEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH--YYIHDRL 183
++ ++G L F+ NCIT GT FM +++ L+ + I +
Sbjct: 104 SDN------------SNGANL---------FNPNCITTGTDFMYKINLALNKWFQILKKK 142
Query: 184 NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLA 243
N P VI S ++VPGEGEHKI+ +IR+ + N HC+ G DADLIML L
Sbjct: 143 NIFP----FDVIFSGSDVPGEGEHKILKFIRENCKRDAAFRNYNHCIYGLDADLIMLSLV 198
Query: 244 THEPNFTIIREEFK 257
TH N I+R+++K
Sbjct: 199 THLNNIFILRDKYK 212
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 91/169 (53%), Gaps = 6/169 (3%)
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGG 382
++ R +DD VF+ F VGNDFLPH+P+++I EG+++ ++N Y +Y+ L ++
Sbjct: 357 FNITRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNAYIYYIYRYNNYLTLKDKVH 416
Query: 383 GGGRGVKRSFDDVDESSE--EEESNDEVRLWEDG--FKDRYYESKFDVPKDDIAFRLMVG 438
+ E S + + + VR + D +K YY KF + +D +
Sbjct: 417 IQRLKIILKILSAQEFSYFLKRGNAENVREFTDESRYKGYYYLQKFGL--EDPKQIQHIV 474
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
++Y+ GL W L YY+ GC SW W +P+HYAP SD ++ + D FE G
Sbjct: 475 NKYIEGLFWNLHYYHFGCASWCWEYPYHYAPLCSDLLSFEKSDFFFEKG 523
>gi|328767906|gb|EGF77954.1| hypothetical protein BATDEDRAFT_91231 [Batrachochytrium
dendrobatidis JAM81]
Length = 126
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 77/101 (76%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
+PA FRWLS KYP V C+ED PQ V +P D++ PNPNG E+DNLYLDMNGIIHP
Sbjct: 7 SIPALFRWLSTKYPKVTSECIEDIPQSVGNTIVPVDTTLPNPNGTEYDNLYLDMNGIIHP 66
Query: 62 CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI 102
C HPEDKPAP EDEM + IF+ IDR+ I+RPRK+LYMAI
Sbjct: 67 CCHPEDKPAPTTEDEMYIEIFKYIDRIMAIIRPRKVLYMAI 107
>gi|71425179|ref|XP_813034.1| 5'-3' exonuclease XRNB [Trypanosoma cruzi strain CL Brener]
gi|70877881|gb|EAN91183.1| 5'-3' exonuclease XRNB, putative [Trypanosoma cruzi]
Length = 1068
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 149/325 (45%), Gaps = 93/325 (28%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++KYP ++ + P +V+G LY+D+NG+IH
Sbjct: 90 MGVPKFASWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 127
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP-------RAKM 111
PC H E P A + E+E + I ++ L VRP +LY+A DGVAP RA+
Sbjct: 128 PCCHSERDPSVAARPEEEKLQCICFKVEVLLATVRPHDILYIATDGVAPRAKMNQQRARR 187
Query: 112 NQQRSRRFRAS-------------KETAEKIAEVARIREKLLADGCI------------- 145
R++ + E AE ++ IR+ L+ D
Sbjct: 188 YMSRAKIVSSGTEVVEEVVREFTPNEMAEVDDDLDDIRQLLMQDALYGGVNFQDDTSETL 247
Query: 146 ------------LPPEKEKGSH-----------------------FDSNCITPGTPFMAR 170
+ P +K ++ FDSNCI+PGT FM +
Sbjct: 248 NGVANIADSLTPVTPCHDKSNNHEAHAEAWAAFDGLTDGTLEVTEFDSNCISPGTAFMVK 307
Query: 171 LSACLHYYIHDRL-NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
++ + + D+L N DP W G++V+ S AN PGEGEHKI+D++R Q + P + H
Sbjct: 308 VTNAILTMVQDKLANGDPLWAGLRVVFSGANTPGEGEHKIVDFLRTQSSYPGFNGKGAHV 367
Query: 230 LCGADADLIMLGLATHEPNFTIIRE 254
+ G DADLI L L+ H P+ ++R+
Sbjct: 368 IAGLDADLIFLSLSLHIPHILLLRD 392
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQ-----------EQ 374
+ +DD++ M +GNDFLP LP E +D L+ LY V Q
Sbjct: 559 SKVIDDFIVMGMLMGNDFLPRLPGAFCGESVMDNLLELYVSNVLPYGFLTSGYHEIYLPQ 618
Query: 375 LRQEENGGGGGRGVK-RSFDDVDESSEEEESNDEV-RLWEDGFKDRYYESKFDVPKDDIA 432
L++ VK R F ++ +E+ + + ++ ++ Y S + A
Sbjct: 619 LQRLLRSYAKIETVKFRRFALSNKKMTPKEAAEPLYSPLDEQWRQTYLTSTGLTGNLEEA 678
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFIN 476
+ +YV GL +V +YY SW W++PFH+APFA D +
Sbjct: 679 CK-----KYVEGLRFVWRYYSGNASTCSWSWHYPFHHAPFALDIAD 719
>gi|340055310|emb|CCC49623.1| putative 5'-3' exonuclease XRNC [Trypanosoma vivax Y486]
Length = 871
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 210/501 (41%), Gaps = 85/501 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ S + P+ + + D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFASCFL---------------------PSNSSPDTDCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDEDEMMVAI----FECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQR 115
E ++ AI F+ +D + R+V+PR L+Y+A+DG++P K+ QQR
Sbjct: 40 QAAALVTSGEGSTEGDIGTAITYRLFDLLDDIILRLVQPRSLVYLAVDGISPMGKLAQQR 99
Query: 116 SRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACL 175
SRR R + P + +DSN IT GTPFM+ L+ L
Sbjct: 100 SRRRRRRHDNN-------------------FPSNHNRNVEWDSNSITVGTPFMSTLTYAL 140
Query: 176 HYYIHDRL----------------NNDPG---WKGIKVILSDANVPGEGEHKIMDYIRKQ 216
H+Y R N PG + ++ D PGEGE KI D IR+
Sbjct: 141 HFYCSSRAERINVERLRQYRSTAGGNAPGDTVPVPVTFVVDDVWRPGEGESKIADAIRRF 200
Query: 217 RAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKE 276
R+QP ++PNT H +C +D D+ + L HEP ++R + CD G +
Sbjct: 201 RSQPSYNPNTSHVICSSDTDMTVCSLILHEPRMHVLRYVYAAENVSHCDGSGSRHNH--- 257
Query: 277 CVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYS-FERALDDWVFM 335
G S+ F E+ I +RL + + E++ L + FERAL D VF+
Sbjct: 258 -TGDSWASTFFSIFAFREELR-IKLRLPPCND--DAEMSAEELEQRHQRFERALHDVVFV 313
Query: 336 CFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDV 395
GNDFLP L I EG +D L+++ + + G + + + +
Sbjct: 314 LQLFGNDFLPSL-GCRIEEGFLDNLLDMLATDFITRGRSIVDPDTNTIQFDGARYALETL 372
Query: 396 DESSEEE------ESNDEVRL-WEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWV 448
E E E+ E L W GF D ++ + + A R + Y L W
Sbjct: 373 AEMRNERVGGLHVENGAEGALDW--GFVDEKFKEQQAAEEAKQAPRC---YAYWTMLQWS 427
Query: 449 LKYYYQGCRSWKWYFPFHYAP 469
L+ W Y+P++ AP
Sbjct: 428 LQNSAGVVEHWGCYYPYNSAP 448
>gi|157867636|ref|XP_001682372.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
gi|68125825|emb|CAJ03874.1| putative 5'-3' exonuclease [Leishmania major strain Friedlin]
Length = 1164
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 157/360 (43%), Gaps = 128/360 (35%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL+RKYPS+++ + P +V+G LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLARKYPSMVM---DSCPGDVHG-------------------LYIDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + ++E + +I I+ L VRP++++Y+AIDGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKMNQQRARR 98
Query: 119 FRAS----------------KETAEKIA----------------EVARIREKLLAD---- 142
+ +S K +A +A E+A + + L+ D
Sbjct: 99 YMSSAAPLTDTDKPIHGGSHKMSATIVAAIEKEFTQAECDGVERELADVSQALMGDVLYG 158
Query: 143 GC-----------------------ILPPEKEKGSHFDSNC------------------- 160
GC +PP D+ C
Sbjct: 159 GCATMALAEDATEKAEAHTLAAAPWTIPPTLASEGKKDACCAAAQVGRQPAAAASPAKFD 218
Query: 161 ---ITPGTPFMARLSACLHYYIHDRL---NNDPG--------------------WKGIKV 194
I+PGT FM ++ + YI +L ND G W G+ V
Sbjct: 219 SNCISPGTAFMDAVATAVRDYIRRKLAPKENDAGGKAEAEAGASPAAITATCAHWAGLTV 278
Query: 195 ILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIRE 254
I SD+N GEGEHKI D++R Q A P + + H + G DADLI L L+ H P I+R+
Sbjct: 279 IFSDSNTAGEGEHKISDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIPRVVILRD 338
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 77/193 (39%), Gaps = 45/193 (23%)
Query: 317 PNLPFP-------YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV- 368
P P P S + +DD++ + +GNDFLPHLPS+ E A+D L+++Y + V
Sbjct: 550 PKAPLPPFHPCTSTSNSKIIDDFIALGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVL 609
Query: 369 -----------------------YKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESN 405
Y E R + G + D ++ E S
Sbjct: 610 PYGYLTGGEYDIQLLQLERLLRAYAAVEAARFRQFAIQSG-----AMTLHDAATPELCSA 664
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYF 463
+ R W D + S D A R YV G+ +V +YY SW WY+
Sbjct: 665 ADRRCWRDVYV--RTTSLRDEAGAQAACR-----SYVEGMRFVWRYYSSISLQVSWAWYY 717
Query: 464 PFHYAPFASDFIN 476
PFH+AP A D +
Sbjct: 718 PFHHAPLALDIAD 730
>gi|15078725|ref|NP_149475.1| 012L [Invertebrate iridescent virus 6]
gi|82013011|sp|Q9QSK5.1|EXON_IIV6 RecName: Full=Putative exonuclease 012L
gi|5725643|gb|AAD48147.1|AF083915_1 012L [Invertebrate iridescent virus 6]
Length = 624
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 138/549 (25%), Positives = 224/549 (40%), Gaps = 167/549 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ FF+WL + S + C++ + N Q I D L +DMNGIIH
Sbjct: 1 MGIKYFFKWLKTNH-SESIKCID---RHDNSQCI--------------DVLLIDMNGIIH 42
Query: 61 PCTH----------PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 110
P++ K ++ + IDR+ +P++L+ + IDGVAPR+K
Sbjct: 43 NSAQEVYGYGSFSFPKENACDK---KVYSLVCRQIDRMVIQFKPKELI-LCIDGVAPRSK 98
Query: 111 MNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAR 170
QQR RRF A+ + + E K S FDSN I+PGT FM
Sbjct: 99 QIQQRQRRFLAAHDRKKPGTEFN------------FDCNKGNTSKFDSNSISPGTEFMHN 146
Query: 171 LSACLHYYI----------------------------HDRLNNDPGWKGIKVILSDANVP 202
L + +I ++++ W + V+ ++ V
Sbjct: 147 LGRYIDIHIKKKQKPAFTGRETTDAPQNNWRNKDQSWRQKVDDTAEWSNLTVVFANDKVS 206
Query: 203 GEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLA----THEPNFTIIREEFKP 258
GEGEHK++DYIRK + +C+ G+DADLIML ++ T N ++R+E+K
Sbjct: 207 GEGEHKLLDYIRKY-----GNSYYTYCIYGSDADLIMLSMSALTTTAIKNIYVLRDEYK- 260
Query: 259 NQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPN 318
PN ++ + + + L K++ N
Sbjct: 261 ------------------------SPN------------YLLINIPNFVKNLIKDVK-SN 283
Query: 319 LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
+R ++D++FMCF VGNDFLPH+PS+EI ++ ++ Y K + +
Sbjct: 284 WTDKLDEKRFINDFIFMCFMVGNDFLPHIPSIEIMTNGIESMLAFYTKN-----KNYITD 338
Query: 379 ENGGG-------------GGRGVKRSF------------DDVDESSEEEESND------- 406
NG G G+++S DD+ ESS +N+
Sbjct: 339 NNGLGEIFNYESLLPILKDLEGLEQSLCNEKVNNSEYFRDDLLESSSFLVTNEFGQQKCV 398
Query: 407 EVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFH 466
+ + + + +++ES + LM Y+ G+ WVL YY W+W + +
Sbjct: 399 NINEYREKYMKKHFESSSEAS-------LM----YLEGMQWVLSYYTLKVPDWEWSYKYD 447
Query: 467 YAPFASDFI 475
YAP + I
Sbjct: 448 YAPNLTSII 456
>gi|109287937|ref|YP_654631.1| hypothetical protein MIV059L [Invertebrate iridescent virus 3]
gi|123808652|sp|Q197A1.1|EX0N_IIV3 RecName: Full=Putative exonuclease 059L
gi|106073560|gb|ABF82089.1| hypothetical protein MIV059L [Aedes taeniorhynchus iridescent
virus]
Length = 560
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 141/526 (26%), Positives = 211/526 (40%), Gaps = 135/526 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ FFRW +P+ + ++ PF L LD+NGIIH
Sbjct: 1 MGIKYFFRWYKDSFPNTVTKYSTKNHKKSQDTDEPF-------------LLLLDLNGIIH 47
Query: 61 PCTHP--------------EDKPAPKDEDEMMVA--IFECIDRLFRIVRPRKLLYMAIDG 104
+ P K E +++V + ID L +V PR+L+ + IDG
Sbjct: 48 TSCQKIYKYGSFEPKNLLKKSPPVYKGEKDVLVYEDVLASIDSLVALVEPRELV-LCIDG 106
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
VAP +K QQR RRF K DG FDSNCI+PG
Sbjct: 107 VAPVSKQIQQRQRRFITHK-----------------TDGG-----------FDSNCISPG 138
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVI-LSDANVPGEGEHKIMDYIRKQRAQPDHD 223
T F+ +L L ++ +L + W + I D+ VPGEGEHK+ D++R + + D
Sbjct: 139 TEFLFQLGLYLKTHLESKLEKE--WLNVSTIYFMDSLVPGEGEHKLFDFLRTHQTRIV-D 195
Query: 224 PNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE 283
+ G DADLIML L + I+E
Sbjct: 196 TKFNIVVVGNDADLIMLSLLV---SVLFIKE----------------------------- 223
Query: 284 PNPESVI---TFGSEVEFIFVRLSVLREYLEKELAMPNLPF-PYSFERALDDWVFMCFFV 339
NP S++ +++++ V +++L++ + + + F PY FE + D+V MCF +
Sbjct: 224 -NPLSILREDLTSKKLDYLLVDINLLKDTIYQNASRDKPRFTPYDFEFVICDFVVMCFMI 282
Query: 340 GNDFLPHLPSLEIREGAVDRLVNLYKKTV-YKTQEQLRQ--EENGGGGGRGVKRSFDD-- 394
GNDFLP +P I +G +D L+ Y T Y T + + N G +K +F
Sbjct: 283 GNDFLPSVPLFNIYDGGLDMLLKYYFTTAGYITCRSVSKFYGRNKGKKMEKIKINFKHLQ 342
Query: 395 ---------VDESSEEEESN---------------DEVRLWEDGFKDRYYESKFDVPKDD 430
V+ + E N E L ED +Y + P
Sbjct: 343 PYLHYIATAVNPQAIEHYRNRNYGYPNVLLDVVLKKEAMLTEDV--TTHYLKAYS-PHHK 399
Query: 431 IAFRLMVGHEYVLGLCWVLKYYYQG--CRSWKWYFPFHYAPFASDF 474
I L+ H Y+ + W+ YY G C W Y+P +AP A D
Sbjct: 400 ITKSLV--HSYLEEIKWIFNYYAYGAVCIDWNMYYPSQFAPTALDL 443
>gi|399218119|emb|CCF75006.1| unnamed protein product [Babesia microti strain RI]
Length = 759
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 216/516 (41%), Gaps = 103/516 (19%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
GVP + W+ P V + + KI G D LYLD+NGI HP
Sbjct: 36 GVPRLYGWIMDTVPFVT--------KTLASSKI----------GKNIDCLYLDLNGIYHP 77
Query: 62 CTHPEDKPAPKD--EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
TH + P D + + IF I ++ I++P+KLLY+A DGV P AK+NQQR+RR
Sbjct: 78 ATHG-NVPIQLDIGQSQRFKRIFTAISNIYSIIKPKKLLYLASDGVCPAAKINQQRTRRN 136
Query: 120 RAS------KETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
R+S + E+ A + + E +L+ C + F N I+PGT F+ L
Sbjct: 137 RSSIGNIQDQINPERFANIQKQLETVLS-SC--GDNRTSTQPFTPNMISPGTEFIVTLEN 193
Query: 174 CLHYYIHDRLNNDPGWKG-IKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
L ++ L G+ G V+ S ++VPGEGEHKI I+ + G
Sbjct: 194 ELRKWLF--LKVSEGFFGNCDVVFSGSDVPGEGEHKIFQSIKSA-------SRLSSMVYG 244
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITF 292
DADL++L T I+RE+ G H V +PNP T
Sbjct: 245 LDADLMLLASLTQGNKCIILREK-----------RGYTPH-----VAARRKPNPYYNSTT 288
Query: 293 G------------SEVEFIFVRLSVLREYLEKELAMPNLP----------FPYSFERALD 330
G + F V L + + L + F S R
Sbjct: 289 GLVHFHKRDFLTLQKRHFELVNLKAVAMHFYNRLVTKDKKKINYNGSEDDFVNSLTR--- 345
Query: 331 DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGG----GGGR 386
D+VF+ F GNDFLP +P++++ + + + Y +K +Q+ GG G
Sbjct: 346 DFVFLTFLAGNDFLPRVPAVDLADESFTPFILSY----FKNFDQI-----GGFITNGDSY 396
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDG--------FKDRYYESKFDVP-KDDIAFRLMV 437
+ R ++ S E++ +R + G + YY+ KF V D F +
Sbjct: 397 SISRFKKFLEFPSTFEQNWFRLRGLKLGIAEFTTNEYAKYYYKIKFGVDVTDQPEFIKGL 456
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
++Y+ GL W + YY + W W + HYAP +D
Sbjct: 457 VNDYLTGLHWNMFYYNRSYSCWNWSYKHHYAPLLTD 492
>gi|330800198|ref|XP_003288125.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
gi|325081816|gb|EGC35318.1| hypothetical protein DICPUDRAFT_87898 [Dictyostelium purpureum]
Length = 171
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 116/202 (57%), Gaps = 32/202 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP ++ QKI DS+ P E+DNLYLDMNGIIH
Sbjct: 1 MGVPRFFRWVSERYPQIL-------------QKI-IDSTPP-----EYDNLYLDMNGIIH 41
Query: 61 PCTHP-EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
C+ + E+E++ + +DRLF +RP KL YMAIDGVAPR+K+NQQR RRF
Sbjct: 42 ACSQEFANSLIEFSEEELIRKVCNYVDRLFHTIRPTKLFYMAIDGVAPRSKINQQRQRRF 101
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ + +++++L+ADG +P F+ ITPGT FM LS L +YI
Sbjct: 102 LS-------VHRDEKLKQQLIADGKPVP-----EVIFNRTAITPGTQFMYNLSEALQFYI 149
Query: 180 HDRLNNDPGWKGIKVILSDANV 201
+++ D W+ ++VI S V
Sbjct: 150 KKKISEDLSWREVQVIFSGPEV 171
>gi|407868229|gb|EKG08789.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 879
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 137/503 (27%), Positives = 200/503 (39%), Gaps = 88/503 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ F SS P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFAPC------------------FLSSSSCPAA---DCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
D ++ +F+ ID + R+VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R S + V +DSN I+ GTPFM+RL+ LH
Sbjct: 100 RRRRRSGGGSRGRNAV----------------------EWDSNSISVGTPFMSRLTEALH 137
Query: 177 YYIHDRLNNDPGWK---------------------GIKVILSDANVPGEGEHKIMDYIRK 215
+Y R G + I I+ D PGEGE KI D IR+
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
R+Q +DPNT H +C +D D+ + L HEP ++R E P+ G +
Sbjct: 198 FRSQSTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLRYECSPSHHGGGASRGGDSGSWR 257
Query: 276 ECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFM 335
VG S+ F E+ RL R+ +E N FERAL D VF+
Sbjct: 258 NQVGDAWASTFFSIHAFRGELRNKL-RLQTSRKDSAEEAERRN----RQFERALHDVVFV 312
Query: 336 CFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDV 395
GNDFLP + I EG +D L+ L + + + D +
Sbjct: 313 LLLFGNDFLPSV-GCRIEEGFLDDLLELLATDFISRDRSIIDPVTNTIQFDSARYALDSL 371
Query: 396 DESSEE---------EESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
E E + N+ W GF D + + + + ++A + + Y L
Sbjct: 372 AEMRRERACGDGLCVDNGNEGATDW--GFVDDTFRKQRQLEETELAPKC---YAYWTMLQ 426
Query: 447 WVLKYYYQGCRSWKWYFPFHYAP 469
W L+ W Y+P+ AP
Sbjct: 427 WSLQNSAGVVEHWGCYYPYGTAP 449
>gi|432111908|gb|ELK34946.1| 5'-3' exoribonuclease 1 [Myotis davidii]
Length = 1223
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 103/166 (62%), Gaps = 32/166 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
FR++KE +KI +K + G LP E + FDSNCITPG
Sbjct: 102 FRSAKEAEDKI-------KKAIEKGETLPTE----ARFDSNCITPG 136
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 320 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 372
>gi|308160629|gb|EFO63105.1| 5'-3' exoribonuclease 2 [Giardia lamblia P15]
Length = 1954
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 194/462 (41%), Gaps = 141/462 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME-FDNLYLDMNGII 59
MGV FRW+ +YP + + P + + DNLY+D N +I
Sbjct: 1 MGVGRLFRWIYERYPLAV--------------------TTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H +D P E M+ I + I L V+PRK +++A DGVAP AK QQR+R
Sbjct: 41 HESIR-KDSYIPFTFTEAMIFGEIADYIQVLVSTVQPRKRIFIATDGVAPSAKAKQQRTR 99
Query: 118 RFRASKE-------------TAEKIAEVARIREKLLADGC----ILPPEKEKGSHFDSNC 160
R+ + E TA ++EV + K +A+G LPP+ K +
Sbjct: 100 RYMGAYESVGVKLYRNNIAGTATILSEVEFLTSKHIANGNNDDQTLPPQNLKAA------ 153
Query: 161 ITPGTPFMARLSACLHYYIHDRLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
I+PGT FM RL + L ++ ++++ PGW V +S ++ GEGEHKIM IR+ +
Sbjct: 154 ISPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPAVTISGWDMCGEGEHKIMAEIRRLKRL 213
Query: 220 -------------------PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
P H+ HC+CG DAD+++LGL H N I+R P
Sbjct: 214 EDLATIGVDYSEKSFSEFFPHHE---SHCICGLDADIVLLGLGLHVHNVYILRLWQPPFV 270
Query: 261 ARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL------ 314
D+ L+++ +P ++ I V LS RE + EL
Sbjct: 271 TDTVDI-------------LESKRHP-------TDKGLIVVDLSCFRECIVAELISNRFH 310
Query: 315 ------AMPNLPFPYSFERALD-------------------------------------- 330
A+ + FP+S+ + L
Sbjct: 311 DPKLLHALCHQSFPHSYMQRLRNCYPRLSREMNDSGMLSRMSLSVLQEAFVWSPLGSALI 370
Query: 331 -DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
D++ + FVGNDFLP +P + I+ ++D + +Y++ + T
Sbjct: 371 VDFIILTLFVGNDFLPEVPGMLIKNNSLDNCIAIYRELLADT 412
>gi|159110732|ref|XP_001705612.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
gi|157433699|gb|EDO77938.1| 5'-3' exoribonuclease 2 [Giardia lamblia ATCC 50803]
Length = 1956
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 194/462 (41%), Gaps = 141/462 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME-FDNLYLDMNGII 59
MGV FRW+ +YP + + P + + DNLY+D N +I
Sbjct: 1 MGVARLFRWIYERYPLAV--------------------TTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCTHPEDKPAPKDEDEMMV--AIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
H +D P E M+ I + I L +PRK +++A DGVAP AK QQR+R
Sbjct: 41 HESIR-KDSYIPFTFTEAMIFGEIADYIQVLVSTAQPRKRIFIATDGVAPDAKAKQQRTR 99
Query: 118 RFRASKE-------------TAEKIAEVARIREKLLADGC----ILPPEKEKGSHFDSNC 160
R+ + E TA ++E + + +A+G LPP+ K +
Sbjct: 100 RYMGAYEKIGTKIYRDSIAGTATVLSEAELLTSQHIANGNDDDQTLPPQNVKAA------ 153
Query: 161 ITPGTPFMARLSACLHYYIHDRLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQ 219
I+PGT FM RL + L ++ ++++ PGW V +S ++ GEGEHKIM IR+ R
Sbjct: 154 ISPGTLFMDRLHSFLIAFVAKNVDSEAPGWVQPSVTISGWDMCGEGEHKIMAEIRRLRQL 213
Query: 220 -------------------PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
P H+ HC+CG DAD+++LGL H N ++R P
Sbjct: 214 EELAASRADCSETSFSEFFPHHE---SHCICGLDADIVLLGLGLHVHNVYVLRLWQPPFV 270
Query: 261 ARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL------ 314
A D+ L+++ +P ++ E I V LS RE + EL
Sbjct: 271 ADTVDI-------------LESKRHP-------TDRELIVVDLSCFRECIVAELISNRFH 310
Query: 315 ------AMPNLPFPYSFERALD-------------------------------------- 330
A+ + FP+++ + L
Sbjct: 311 NPKLLHALCHQSFPHTYMQRLKNCYPRLSREMNDSGMLSRMSLNVLQEAFIWSPLASALI 370
Query: 331 -DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
D++ + FVGNDFLP +P + ++ ++D + +Y++ + T
Sbjct: 371 VDFIILTLFVGNDFLPEVPGMLVKNNSLDNCIAIYRELLADT 412
>gi|253744666|gb|EET00835.1| 5'-3' exoribonuclease 2 [Giardia intestinalis ATCC 50581]
Length = 1956
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 194/461 (42%), Gaps = 139/461 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGME-FDNLYLDMNGII 59
MGV FRW+ +YP F + P + + DNLY+D N +I
Sbjct: 1 MGVARLFRWIYERYP--------------------FAITTPGASFVSRIDNLYIDFNALI 40
Query: 60 HPCTHPEDKPAPKDEDEMMVA-IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H + K + M+ I + I L V+PRK +++A DGVAP AK QQR RR
Sbjct: 41 HESIRKDSYIPFKFTEAMLFGEIADYIQVLVSTVQPRKRIFIATDGVAPDAKTKQQRVRR 100
Query: 119 FRAS--KETA----EKIAEVARI--REKLLADGCI---------LPPEKEKGSHFDSNCI 161
+ S KE + EKIA A + +LLA I LPP+ K + I
Sbjct: 101 YMGSYQKEGSTLYKEKIAGTANVLSEAELLASRHIANGNSDDRSLPPQNVKTA------I 154
Query: 162 TPGTPFMARLSACLHYYIHDRLNND-PGWKGIKVILSDANVPGEGEHKIM---------- 210
+PGT FM RL + L ++ ++++ PGW V +S ++ GEGEHKIM
Sbjct: 155 SPGTLFMDRLHSFLIAFVAKNVDSEAPGWVHPSVTISGWDMCGEGEHKIMTEIKRIKQLE 214
Query: 211 -------DYIRKQRAQ--PDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQA 261
DY K ++ P H+ HC+CG DAD+I+LGL H N ++R P
Sbjct: 215 EQAAIGVDYSEKSFSEFFPYHE---SHCICGLDADIILLGLGVHVQNVYLLRLWQPPFVT 271
Query: 262 RPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKEL------- 314
D+ LD++ +P ++ E I V LS RE + EL
Sbjct: 272 DTLDI-------------LDSKKHP-------TDNELIVVDLSCFRECIVGELISNRFHN 311
Query: 315 -----AMPNLPFPYSFERALD--------------------------------------- 330
A+ FP S+ + L
Sbjct: 312 PKLLHALCCQSFPDSYMQRLRNCYPRLSKELHDDGVLSRLSLNVLQEAFVWSPLGSALIV 371
Query: 331 DWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
D++ + FVGNDFLP +P + I+ G++D + +Y++ + T
Sbjct: 372 DFIILTLFVGNDFLPEVPGMLIKNGSLDNCIAIYRELLADT 412
>gi|123428648|ref|XP_001307542.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121889177|gb|EAX94612.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 498
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 206/509 (40%), Gaps = 123/509 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP + +W+ + H S+K +P +DNLY+DMN II+
Sbjct: 1 MGVPGYLQWILTRISDTQFH----------------HSAKSSP----YDNLYIDMNSIIY 40
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + +++ I ID L ++ RP+K++ +A+DG P AK++QQRSRR+
Sbjct: 41 YAINKINFKDRLPNQDLVNEIVIKIDELVKMARPKKIILIAVDGCPPTAKISQQRSRRYA 100
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
S + S FD + + PGT FM L+ L +
Sbjct: 101 YSANYQD--------------------------SSFDLSNVFPGTEFMINLNKLLESQLL 134
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ ND W K+ SD PGEGEHKI+D+IR P++ + + D D+I L
Sbjct: 135 NKITNDEIWSKAKLYYSDVFCPGEGEHKIVDFIRSISNDPEYSHSEWSYIYTVDTDVIFL 194
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
L+ H PN+++I F+P ++
Sbjct: 195 ALSIHNPNYSLI---FEPQNGS----------------------------------QYTV 217
Query: 301 VRLSVLREYLEKELAMPNLPFPY---SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAV 357
+ + +REY+ ++ PY FER +DD+VF+ F NDF LE +
Sbjct: 218 IHIDSIREYIFQQFE------PYCKPDFERIIDDYVFLSFLFKNDFFAGFKELEFCTQSK 271
Query: 358 DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKD 417
D ++ Y+ ++ GG G +D++ + L + F +
Sbjct: 272 DTIITNYRAA---------RKALGGFIVNG-----NDIN-----------IELLK-KFIE 305
Query: 418 RYYESKFDVPKDDIAFRL----MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
Y S D I F+ + E + W+ +YY GC W + + + P +
Sbjct: 306 SYLISNKISESDKIDFKCDDEQKIVDETLRVFMWMHQYYKSGCPDWTFSYQYPKPPPITL 365
Query: 474 FINIA-EVDTNFETGTQPVNNNRILKFIL 501
F + ++ +NF+ + +L IL
Sbjct: 366 FHKLVRDIPSNFDRNIRIPTAVELLLIIL 394
>gi|148696568|gb|EDL28515.1| 5'-3' exoribonuclease 2, isoform CRA_c [Mus musculus]
Length = 725
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 86/112 (76%), Gaps = 6/112 (5%)
Query: 266 VCGQM--GHEMKECVGLDAEPNPESVITFGS----EVEFIFVRLSVLREYLEKELAMPNL 319
VC ++ GHE+K+C GL E + S E EFIF+RL+VLREYLE+EL M +L
Sbjct: 37 VCVELMFGHEVKDCEGLPREKKGKHDELADSLPCAEGEFIFLRLNVLREYLERELTMASL 96
Query: 320 PFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKT 371
PFP+ ER++DDWVFMCFFVGNDFLPHLPSLEIREGA+DRLVN+YK V+KT
Sbjct: 97 PFPFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAIDRLVNIYKNVVHKT 148
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 265 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 321
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 322 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 365
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 396 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 448
Score = 47.8 bits (112), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ ++ K
Sbjct: 150 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRR--------RQKEKRKRMKR 201
Query: 651 KAPSFIPGGQFAPQ 664
P+F P G P
Sbjct: 202 DQPAFTPSGILTPH 215
>gi|224587081|gb|ACN58600.1| 5-3 exoribonuclease 2 [Salmo salar]
Length = 575
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Query: 382 GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEY 441
G GRGVKR +D D + E D VRLWEDG+K RYY++KFDV D FR V Y
Sbjct: 102 GQDGRGVKRKAEDSDSEPDPE---DNVRLWEDGWKQRYYKTKFDVDATDDDFRKKVVMSY 158
Query: 442 VLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
V GLCWVL+YYYQGC SWKWYFPFHYAPFASDF +I + T+FE GT+P
Sbjct: 159 VEGLCWVLRYYYQGCASWKWYFPFHYAPFASDFKDIKGMFTDFELGTKP 207
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 44/54 (81%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
+S IIDFYP+DF IDLNGKK+AWQGVALLPFVDE RL ALA Y LS EE++
Sbjct: 238 ESSIIDFYPDDFAIDLNGKKYAWQGVALLPFVDERRLRAALAEVYPNLSPEENK 291
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 594 TDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTKAP 653
T++G VKLE V+LIMQ +G+ ED IFKKR++ + FK RNK K K + P
Sbjct: 1 TENGFVKLESVELIMQAIGVAEDNIFKKRKEDDEGFKRRNKEK------KKRMKAQQQGP 54
Query: 654 SFIPGGQFAPQ 664
SF+ GQFAPQ
Sbjct: 55 SFLTSGQFAPQ 65
>gi|195338779|ref|XP_002036001.1| GM16250 [Drosophila sechellia]
gi|194129881|gb|EDW51924.1| GM16250 [Drosophila sechellia]
Length = 431
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 67/85 (78%)
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
VRLWEDGFKDRYYESKFDV + FR V +YV GLCWVLKYYYQGC SW WYFP+HY
Sbjct: 16 VRLWEDGFKDRYYESKFDVAPGNQQFRYAVALQYVRGLCWVLKYYYQGCASWNWYFPYHY 75
Query: 468 APFASDFINIAEVDTNFETGTQPVN 492
APFASDF+NI + T FE GT+P N
Sbjct: 76 APFASDFVNIQGLSTMFEKGTKPFN 100
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 619 FKKRQQTETMFKMRNKMKKRRERQMKM--AAQSTKAPSFIPGGQF-APQDSPIIDFYPED 675
F Q TMF+ K E+ M + AA S+ P P + + +SPIIDFYPED
Sbjct: 82 FVNIQGLSTMFEKGTKPFNPLEQLMGVFPAASSSHVPE--PWAKLMSDPESPIIDFYPED 139
Query: 676 FKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
FKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 140 FKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEE 180
>gi|71665017|ref|XP_819483.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70884786|gb|EAN97632.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 880
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 201/504 (39%), Gaps = 89/504 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ F SS P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFAPC------------------FLSSSSCPAA---DCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
D ++ +F+ +D + R+VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R S + V +DSN I+ GTPFM+RL+ LH
Sbjct: 100 RRRRRSGGGSRGRNAV----------------------EWDSNSISVGTPFMSRLTEALH 137
Query: 177 YYIHDRLNNDPGWK---------------------GIKVILSDANVPGEGEHKIMDYIRK 215
+Y R G + I I+ D PGEGE KI D IR+
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
R+Q +DPNT H +C +D D+ + L HEP ++R E P+ G +
Sbjct: 198 FRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLRYECSPSHHSGGASRGGDSGSWR 257
Query: 276 ECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFM 335
VG S+ F E+ RL R+ +E N FERAL D VF+
Sbjct: 258 NQVGDAWASTFFSIHAFREELRNKL-RLQTSRKDSAEEAERRN----RQFERALHDVVFV 312
Query: 336 CFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDV 395
GNDFLP + I EG +D L+ L + + + D +
Sbjct: 313 LLLFGNDFLPSV-GCRIEEGFLDDLLELLATDFISRDRSIIDPVTNTIQFDSARYALDSL 371
Query: 396 DESSEEEESNDEVRL---------WEDGFKDRYYESKFDVPKD-DIAFRLMVGHEYVLGL 445
E E D + + W GF D + + + ++ ++A + + Y L
Sbjct: 372 AEMRRERACGDGLCVDNGKEGATDW--GFVDDTFRKQRQLKEEAELAPKC---YAYWTML 426
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAP 469
W L+ W Y+P+ AP
Sbjct: 427 QWSLQNSAGVVEHWGCYYPYGTAP 450
>gi|357289551|gb|AET72864.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 12T]
gi|357292303|gb|AET73639.1| 5'-3' exoribonuclease [Phaeocystis globosa virus 14T]
Length = 526
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 124/508 (24%), Positives = 210/508 (41%), Gaps = 110/508 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P +F L R + +++ SS N NLY+D N II+
Sbjct: 1 MGIPYYFANLIRTHKKIVIDL----------------SSIGN-----IQNLYIDSNSIIY 39
Query: 61 PCT-HPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
+ + E+ ++ + + I+ + ++P K + +A DGV P AK+NQQ++RR+
Sbjct: 40 DAIDFSLFQNKSQFENHIIQTVIDKIELIITTIKPTKNIILAFDGVPPFAKLNQQKNRRY 99
Query: 120 RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYI 179
+ S ++ L + K +D+ ITPGT FM +L+ L +
Sbjct: 100 KTSYQST------------LFS----------KNVPWDTTAITPGTEFMDKLNDTLKNHF 137
Query: 180 HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
D+ +K +ILS ++PGEGEHK+ +++R + D NT + G D+DLIM
Sbjct: 138 GDK------YKSNNLILSLTDIPGEGEHKLFEFVRNNNHKHD---NT--VIYGMDSDLIM 186
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFI 299
L L + +I P+ D +P E I + I
Sbjct: 187 LSLNHKKYTNSIYLYRETPHFISSLDST--------------LDPAKEYFIDINHLADQI 232
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR 359
+ L+ EK+ ++ + D++ +CF +GNDF H P++ +R +
Sbjct: 233 YHLLTDKTFDPEKQSIE-------AYYNKISDYILICFLLGNDFNEHFPAINLRNNGITI 285
Query: 360 LVNLY---------------------KKTVYKTQEQLRQ--EENGGGGGRGVKRSFDDVD 396
L++LY KK ++K Q +EN R K+ + +
Sbjct: 286 LLDLYREIFGVSQNIIKDGEINWVNFKKYIFKLANNEHQFIKENYKIRDRLSKKFYPETT 345
Query: 397 ESSEEEESNDE----------VRLWEDGFKDRYYESKFDVPKD-DIAFRLMVGHEYVLGL 445
+ +E + N + E ++ RYY S F + D D V + Y++ L
Sbjct: 346 DEEKELKFNTTPSWERNIEQFINPHEKHWQYRYYHSLFHIDTDKDTNALASVCNNYLMTL 405
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAPFASD 473
W YY + C SWK + +HY P D
Sbjct: 406 QWTFYYYSRDCVSWKHSYQYHYPPLLED 433
>gi|444520441|gb|ELV12993.1| 5'-3' exoribonuclease 2 [Tupaia chinensis]
Length = 669
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR DD D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 272 GIKRKADDSDS---EPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 328
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 329 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 372
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 70/78 (89%)
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+E EFIF+RL+VLREYLE+EL M +LPF + ER++DDWVFMCFFVGNDFLPHLPSLEIR
Sbjct: 78 AEGEFIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIR 137
Query: 354 EGAVDRLVNLYKKTVYKT 371
EGA+DRLVN+YK V+KT
Sbjct: 138 EGAIDRLVNIYKNVVHKT 155
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 127 EKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNND 186
E E R+RE++LA G LPPE+ K FDSNCITPGT FM L+ CL YYI DRLNND
Sbjct: 2 EAAVEKQRVREEILAKGGFLPPEEIK-ERFDSNCITPGTEFMDNLAKCLRYYIADRLNND 60
Query: 187 PGWKGIKVI-LSDANVPGEGE 206
PGWK + L+D+ EGE
Sbjct: 61 PGWKNLTHDELADSLPSAEGE 81
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 403 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 455
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F+ R + K
Sbjct: 157 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQ--------KEKRKRMKR 208
Query: 651 KAPSFIPGGQFAPQ 664
P+F PGG P
Sbjct: 209 DQPAFTPGGILTPH 222
>gi|395510133|ref|XP_003759335.1| PREDICTED: 5'-3' exoribonuclease 2-like, partial [Sarcophilus
harrisii]
Length = 349
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Query: 385 GRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLG 444
G G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV G
Sbjct: 19 GGGIKRKAEDSDS---EPEPEDNVRLWESGWKQRYYKNKFDVDAADEKFRRKVVQSYVEG 75
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
LCWVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 76 LCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTRP 121
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
+S IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ +E+
Sbjct: 152 ESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPDET 204
>gi|62913987|gb|AAH06417.2| XRN2 protein, partial [Homo sapiens]
Length = 580
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 121 GIKRKAEDSDS---EPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 177
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 178 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 221
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 252 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 304
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMF 629
G+LT+SG V L+RVQ+IM +G +ED IFKKR+ E F
Sbjct: 6 GYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSF 44
>gi|7019942|dbj|BAA90934.1| unnamed protein product [Homo sapiens]
Length = 560
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 101 GIKRKAEDSDS---EPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 157
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ ++FE GT+P
Sbjct: 158 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKP 201
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 232 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 284
>gi|13278447|gb|AAH04028.1| Xrn2 protein [Mus musculus]
gi|148696567|gb|EDL28514.1| 5'-3' exoribonuclease 2, isoform CRA_b [Mus musculus]
Length = 561
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 101 GIKRKAEDSDSEPEPE---DNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 157
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 158 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMSSEFEKGTKP 201
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 232 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 284
>gi|407394522|gb|EKF26964.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi marinkellei]
Length = 367
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 164/381 (43%), Gaps = 76/381 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ F SS P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFAPC------------------FLSSSSCPAA---DCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
D ++ +F+ +D + R+VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDILDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R S + V +DSN I+ GTPFM+RL+ LH
Sbjct: 100 RRRRRSGGGSRGRNAV----------------------EWDSNSISVGTPFMSRLTEALH 137
Query: 177 YYIHDRL----------------------NNDPGWKGIKVILSDANVPGEGEHKIMDYIR 214
+Y R +DP I I+ D PGEGE KI D IR
Sbjct: 138 FYCASRAERMNGERLRDELQQAARGNTRGGDDPV-TPITFIVDDVWRPGEGESKIADAIR 196
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEM 274
+ R+QP +DPNT H +C +D D+ + L HEP ++R E P+ G
Sbjct: 197 RFRSQPTYDPNTSHIICSSDTDVTVCSLILHEPRIHVLRYECSPSHHSGGASRGGDSGSW 256
Query: 275 KECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVF 334
+ VG DA + I E +RL R+ +E+ N FERAL D VF
Sbjct: 257 RNQVG-DAWASTFFSIYAFREALRNKLRLQTSRKDSTEEVERRN----RQFERALHDVVF 311
Query: 335 MCFFVGNDFLPHLPSLEIREG 355
+ GNDFLP + I EG
Sbjct: 312 VLLLFGNDFLPSV-GCRIEEG 331
>gi|157817638|ref|NP_001102066.1| 5'-3' exoribonuclease 2 [Rattus norvegicus]
gi|149041187|gb|EDL95120.1| 5'-3' exoribonuclease 2 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 561
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 74/104 (71%), Gaps = 3/104 (2%)
Query: 387 GVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLC 446
G+KR +D D E E D VRLWE G+K RYY++KFDV D FR V YV GLC
Sbjct: 101 GLKRKAEDSDS---EPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQSYVEGLC 157
Query: 447 WVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
WVL+YYYQGC SWKWY+PFHYAPFASDF IA++ + FE GT+P
Sbjct: 158 WVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSEFEKGTKP 201
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 232 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEEN 284
>gi|324502945|gb|ADY41287.1| 5'-3' exoribonuclease 2 [Ascaris suum]
Length = 578
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 72/96 (75%)
Query: 395 VDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+++S EEE DEVRLWE G+K+RYY SKF+V +DIAFR V YV GLCWVLKYYYQ
Sbjct: 136 MEDSDSEEEVYDEVRLWETGWKERYYRSKFEVDGNDIAFRHKVAWAYVEGLCWVLKYYYQ 195
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
GC SW WYFP+HYAPFASDF I++ +F T+P
Sbjct: 196 GCVSWNWYFPYHYAPFASDFDTISQFKPDFSAHTEP 231
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
++SPIIDFYPEDF++DLNGKK+AWQGVALLPFVDE RL + LA Y+KL E E
Sbjct: 261 EESPIIDFYPEDFQVDLNGKKYAWQGVALLPFVDEHRLLETLATVYDKLDDFERE 315
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Query: 592 FLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQSTK 651
+LT+ GDV ++RVQ I+ LG +EDEIFK RQQ E F+ RNK K+RRER +
Sbjct: 19 YLTNQGDVYMDRVQKILNGLGEVEDEIFKSRQQKELQFRERNKAKRRRER-------AAT 71
Query: 652 APSFIP--GGQFAPQDSPIIDFYPEDFK 677
P++IP G APQ + + F D +
Sbjct: 72 TPAYIPVRGSLLAPQANGPVSFSGADTR 99
>gi|145507546|ref|XP_001439728.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406923|emb|CAK72331.1| unnamed protein product [Paramecium tetraurelia]
Length = 214
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 34/215 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAFFRWL + P ++ +E+ + N + DNLYLDMNGIIH
Sbjct: 1 MGVPAFFRWLCARNPKALLEVLENSDESCLS------------NNPDIDNLYLDMNGIIH 48
Query: 61 PCTHPEDK--PAPKDEDEMMVAIFECIDRLFRIV----RPRKLLYMAIDGVAPRAKMNQQ 114
PC+HP+ P P D+M V +F IDRL I+ P ++ +D P+
Sbjct: 49 PCSHPDQGGIPIPVTYDDMFVNVFHYIDRLVDIMVLPQEPNQISKEVVDLEQPKNPF--- 105
Query: 115 RSRRFRASKETAEKIAEV-ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSA 173
FR + E E+ A+IR L + I EK +FDSN ITPGT FM +L+
Sbjct: 106 ---EFRKKRNVYEITGELKAQIRT--LQNTYI-----EK--NFDSNQITPGTEFMQKLNI 153
Query: 174 CLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
L YYI+DR+NN+P ++ + +I +D+++PGEGE +
Sbjct: 154 ALQYYIYDRMNNNPLFRNVLIIFNDSSIPGEGERQ 188
>gi|302853934|ref|XP_002958479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
gi|300256207|gb|EFJ40479.1| hypothetical protein VOLCADRAFT_108142 [Volvox carteri f.
nagariensis]
Length = 1602
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 44/261 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F +L R+Y VI + K + +D + P D LY+DMN IIH
Sbjct: 1 MGVPGLFAFLKRRY-GVIARFISKK------EDGSWDGAAPA------DALYVDMNHIIH 47
Query: 61 PCTHPEDKP--APKDE-------DEMMVAIFECIDRLF-----------------RIVRP 94
CTH P DE D + A+ E D R P
Sbjct: 48 SCTHANTGSDGLPYDENAAFERMDAYLTALLEIADGGGAAAGADTAAAAAKATNSRPPSP 107
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVAR-IREKLL--ADGCILPPEKE 151
+LL++AIDGVAP AKMNQQR+RRF S AE V R +R ++ A G P+
Sbjct: 108 LRLLFVAIDGVAPIAKMNQQRTRRF-LSAHVAEVTDHVEREVRAEMTSQAGGSRTIPDT- 165
Query: 152 KGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMD 211
S FD N I+ GT FM+R++ + + ++ DP + ++VI+SD+ P EGEHKIM
Sbjct: 166 SSSRFDPNIISIGTVFMSRVADRVRAMLRTKVQTDPRFTQLRVIVSDSYEPAEGEHKIMR 225
Query: 212 YIRKQRAQPDHDPNTQHCLCG 232
+IR R +P++DPNT+H + G
Sbjct: 226 FIRHLRTRPEYDPNTRHIIYG 246
>gi|358253113|dbj|GAA52094.1| 5'-3' exoribonuclease 2 [Clonorchis sinensis]
Length = 1234
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Query: 381 GGGGGRGVKRSF--DDVDESSEEEESNDEVRLWEDGFKDRYYESKFDV-PKDDIAFRLMV 437
GG G V +S D + + ++NDEVRLWEDG++ RYY+SKF V P D F + V
Sbjct: 502 GGVGADAVMKSLPKDSDYDQDDVADANDEVRLWEDGWRTRYYQSKFGVDPADAPEFCIQV 561
Query: 438 GHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE-TGTQP 490
G EY GLCWVL YYYQGC SW WYFP+HYAPFASDFI I ++D F+ TQP
Sbjct: 562 GKEYAKGLCWVLAYYYQGCASWDWYFPYHYAPFASDFIGIDQLDPGFDKVKTQP 615
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 60/75 (80%)
Query: 297 EFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+FIF+ L+VLREYL ++L + L F + ER +DDWVFMCFFVGNDFLPHLPSLEIREGA
Sbjct: 248 DFIFIHLNVLREYLAQDLKLTGLTFEWDLERVIDDWVFMCFFVGNDFLPHLPSLEIREGA 307
Query: 357 VDRLVNLYKKTVYKT 371
+DRL+ +YK V T
Sbjct: 308 IDRLIEIYKSAVQTT 322
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 40/52 (76%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
DSPIIDFYP DFK+DLNGK++ W GVALLPFVDE RL KAL LS EE
Sbjct: 646 DSPIIDFYPTDFKVDLNGKRYLWMGVALLPFVDEVRLLKALDERRHLLSDEE 697
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 10/121 (8%)
Query: 584 SRMLTYPGFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQM 643
S + T G+LT SG V ++RVQLIM +LG MEDEIFK R+Q+E F+ K++R+ Q
Sbjct: 317 SAVQTTGGWLTHSGKVHMDRVQLIMVELGKMEDEIFKNRRQSELNFR-----KRKRDNQS 371
Query: 644 KMAAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHK 703
+ ++ S + P AP+ I++ P + + + ++G P V +H+
Sbjct: 372 RDSSPSPQRMGQRPSWNTAPRGG-ILEPVPLGGRYGVAHPQGRYRG----PSVSAAEIHQ 426
Query: 704 A 704
A
Sbjct: 427 A 427
>gi|402588112|gb|EJW82046.1| hypothetical protein WUBG_07043 [Wuchereria bancrofti]
Length = 442
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 70/95 (73%)
Query: 396 DESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQG 455
+ SS E+E+ DEVRLWEDG+KDRYY+SKF V DI FR V YV GLCWVL YYYQG
Sbjct: 7 NNSSSEDEAFDEVRLWEDGWKDRYYKSKFQVDGKDIVFRRKVALAYVEGLCWVLHYYYQG 66
Query: 456 CRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
C SW WY+PFHYAPFASDF +++ +F T+P
Sbjct: 67 CASWDWYYPFHYAPFASDFDAVSQFKPDFSAYTEP 101
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 42/53 (79%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
SPIIDFYP++F IDLNGKK AWQGVALLPFVDE+RL + L P +KL E E
Sbjct: 133 SPIIDFYPDNFVIDLNGKKCAWQGVALLPFVDEKRLLEVLKPMEDKLDAFEKE 185
>gi|72392625|ref|XP_847113.1| 5'-3' exonuclease XRNC [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176006|gb|AAX70128.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei]
gi|70803143|gb|AAZ13047.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 868
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 198/504 (39%), Gaps = 88/504 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ + + P+ + + D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLRRRFAACFL---------------------PSNSNVSADCLYIDVNGLVY 39
Query: 61 PCTHPEDKPA--PKD-EDEMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
P D E ++ +F+ +D + R+VRPR L+Y+A+DG++P K+
Sbjct: 40 QAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKL----- 94
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
A+ R + P + + +DSN I+ GT FM+ L+ LH
Sbjct: 95 ----------------AQQRSRRRRRRRQDPHSHVRTTEWDSNSISVGTSFMSSLTDALH 138
Query: 177 YYIHDRLN--------------------------NDPGWKGIKVILSDANV--PGEGEHK 208
+Y R N+ + +SD NV PGEGE K
Sbjct: 139 FYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSD-NVWRPGEGESK 197
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR-EEFKPNQARPCDVC 267
I D IR+ R+QP +DPNT H +C +D D+ + L HEPN ++R E + A+ +
Sbjct: 198 IADAIRRFRSQPSYDPNTAHVICSSDTDVTVCSLILHEPNIHVLRYEHVSASTAKGGN-- 255
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
+ + G S+ F E+ +RL + + A FE
Sbjct: 256 ----NNWQTYAGDSWASTFFSIYAFREELR---LRLRIEQTRSNTMSAEELEKLNKQFEA 308
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
AL D VF+ GNDFLP + I EG +D L+ + +
Sbjct: 309 ALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDSLLEMLATDFVTRGRSIVDPVTNTIQFDA 367
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYY--ESKFDVPKDDIAFRLMVGHEYVLGL 445
+ + + + E E S +V +G D + E + A + + Y L
Sbjct: 368 ARYALESLAEMRNERSSGLQVDNGAEGAADWGFVNEQFLQRKAAEEAEKAPWCYAYWTML 427
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAP 469
W L+ W Y+P+ AP
Sbjct: 428 QWSLQNSAGVVEHWGCYYPYSTAP 451
>gi|339906034|ref|YP_004732831.1| hypothetical protein WIV_gp048 [Wiseana iridescent virus]
gi|308051904|gb|ADO00391.1| hypothetical protein [Wiseana iridescent virus]
Length = 566
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 219/532 (41%), Gaps = 139/532 (26%)
Query: 1 MGVPAFFRWLSRKYPSVI---------------VHCVEDKPQEVNGQKIPFDSSKPNPNG 45
MG+ FF+W +P + +C +D V+G PF
Sbjct: 1 MGIKYFFKWFKDSFPKTVKKPFGREDQNLRDALANCEDD----VDGLNNPFL-------- 48
Query: 46 MEFDNLYLDMNGIIHPCTH---------PED---KPAPKDEDEMMVAIFE----CIDRLF 89
L LD+NGIIH P+ K P + E + +FE I+ L
Sbjct: 49 -----LLLDLNGIIHTSCQKIYKYGSFEPKSLLKKSPPINSGEKDLLVFEDVLNSINSLV 103
Query: 90 RIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPE 149
+ P++++ + IDGVAP +K QQR RRF +
Sbjct: 104 VKIDPKEIV-LCIDGVAPISKQIQQRQRRFLS---------------------------- 134
Query: 150 KEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVI-LSDANVPGEGEHK 208
K+ FDSNCI+PGT F+ +L L I +L D W + I D+ VPGEGEHK
Sbjct: 135 KKTNGGFDSNCISPGTEFLYKLGLYLKSNIEKKLEKD--WLNVTTIYFMDSLVPGEGEHK 192
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCG 268
+ D++R +A+ ++ N + G DADLIML L TI +E
Sbjct: 193 LFDFLRSNQAKIINE-NMGIIVVGNDADLIMLSLLIS----TIFLKE------------- 234
Query: 269 QMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFP-YSFER 327
+ + ++E + +++++ + ++ L++ + AM F Y FE
Sbjct: 235 NLIYILREDLT-------------SKKLDYLLISITQLKKNI-LNFAMEKPKFKHYDFEY 280
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV-YKTQEQLRQEENGGGGGR 386
+ D+V +CF VGNDFLP +P I +G +D ++ Y T Y T L N G +
Sbjct: 281 VVCDFVILCFMVGNDFLPPIPLFNIYDGGLDLMMKYYFTTPGYLTNVPL---SNTVQGTK 337
Query: 387 GVKRSFDDVDE------SSEEEESNDEVRLWEDGFKDRYYE--SKFDVPKDDIA---FRL 435
+K + ++ + ++ + E GF + + SK ++ + I F+
Sbjct: 338 NLKINLKNLMKYFNHLLVVTSPQAIQHYKTREYGFPNILLDIASKKEITLEGITSHYFKS 397
Query: 436 MVGHE---------YVLGLCWVLKYYYQG--CRSWKWYFPFHYAPFASDFIN 476
H YV + WV YY G WK Y+P +AP D ++
Sbjct: 398 YSIHHKINKKLVQLYVKEIEWVFNYYTYGGFTVDWKMYYPSQFAPTPVDLLH 449
>gi|261330307|emb|CBH13291.1| 5'-3' exonuclease XRNC, putative [Trypanosoma brucei gambiense
DAL972]
Length = 960
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 198/504 (39%), Gaps = 88/504 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ + + P+ + + D LY+D+NG+++
Sbjct: 93 MGVPLLLTWLRRRFAACFL---------------------PSNSNVSADCLYIDVNGLVY 131
Query: 61 PCTHPEDKPA--PKD-EDEMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
P D E ++ +F+ +D + R+VRPR L+Y+A+DG++P K+
Sbjct: 132 QAATLATSGGGDPADIEAAILRRLFDLLDDIVLRLVRPRSLVYLAVDGISPMGKL----- 186
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
A+ R + P + + +DSN I+ GT FM+ L+ LH
Sbjct: 187 ----------------AQQRSRRRRRRRQDPHSHVRTTEWDSNSISVGTSFMSSLTDALH 230
Query: 177 YYIHDRLN--------------------------NDPGWKGIKVILSDANV--PGEGEHK 208
+Y R N+ + +SD NV PGEGE K
Sbjct: 231 FYCASRAERINVERLREYKQRDVGKDVASAGFPANEKAAPSLITFVSD-NVWRPGEGESK 289
Query: 209 IMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIR-EEFKPNQARPCDVC 267
I D IR+ R+QP++DPNT H +C +D D+ + L HEPN ++R E + A+ +
Sbjct: 290 IADAIRRFRSQPNYDPNTAHVICSSDTDVTVCSLILHEPNIHVLRYEHVSASTAKGGN-- 347
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
+ + G S+ F E+ +RL + + A FE
Sbjct: 348 ----NNWQTYAGDSWASTFFSIYAFREELR---LRLRIEQTCSNTMSAEELEKLNKQFEA 400
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRG 387
AL D VF+ GNDFLP + I EG +D L+ + +
Sbjct: 401 ALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDSLLEMLATDFVTRGRSIVDPVTNTIQFDA 459
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYY--ESKFDVPKDDIAFRLMVGHEYVLGL 445
+ + + + E E +V +G D + E + A + + Y L
Sbjct: 460 ARYALESLAEMRNERSGGLQVDNGAEGAADWGFVNEQFLQRKAAEEAEKAPWCYAYWTML 519
Query: 446 CWVLKYYYQGCRSWKWYFPFHYAP 469
W L+ W Y+P+ AP
Sbjct: 520 QWSLQNSAGVVEHWGCYYPYSTAP 543
>gi|384249414|gb|EIE22896.1| single-stranded RNA 5, partial [Coccomyxa subellipsoidea C-169]
Length = 167
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 103/192 (53%), Gaps = 30/192 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL +KYP +IV +E+ G F DNLY+DMN +IH
Sbjct: 1 MGVPGLFGWLRKKYP-LIVRPASAGAEEIQGDGDSF-----------CDNLYIDMNHVIH 48
Query: 61 PCTHPEDKPAPK-DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR- 118
CTHP + P E+EM + + +D LF RPR+L +A+DGVAP+AKMNQQR+RR
Sbjct: 49 ACTHPSWRCTPYLSEEEMFLDMQIYLDHLFNTARPRRLFMVAMDGVAPQAKMNQQRTRRF 108
Query: 119 FRASKETAEKIAEV-ARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHY 177
F A +E K E+ ARI E LP FD N ITP T FMARL+ L
Sbjct: 109 FSAYREELSKELEIEARIPE--------LP-------SFDGNVITPSTAFMARLAGMLRA 153
Query: 178 YIHDRLNNDPGW 189
+ +L DP W
Sbjct: 154 FFAAKLGADPCW 165
>gi|393910356|gb|EFO19268.2| hypothetical protein LOAG_09226 [Loa loa]
Length = 1318
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 91/161 (56%), Gaps = 23/161 (14%)
Query: 210 MDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQ 269
MD+IR +R++ D+D NT+HCL G DADLIMLG+ +HEP+F ++REE K + R
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLIMLGICSHEPHFALLREEVKFGRQR------- 53
Query: 270 MGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFPYSFER 327
H K G++ E+ F + LS+LREYL E LPF Y E
Sbjct: 54 -NHNGKHKTGVN-------------EITFHLLHLSLLREYLSWEFHSLKEKLPFEYDLES 99
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
+DDWV M F VGNDF+PHLP + I E A+ L Y + +
Sbjct: 100 VIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVL 140
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
Y+ + W L YYY GC SW W++P HYAP+ SD + AE++ NF+
Sbjct: 325 YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDVSDFAEMEMNFD 369
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
SPIIDFYPE F DLNGKK W+ V L+PF+ E+RL +A+A
Sbjct: 405 SPIIDFYPEQFDTDLNGKKNDWEAVVLIPFIREDRLLQAMA 445
>gi|342182575|emb|CCC92054.1| putative exoribonuclease 2 [Trypanosoma congolense IL3000]
Length = 867
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 164/401 (40%), Gaps = 100/401 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ S + P+ + D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLRRRFSSCFL---------------------PSNTVLSTDCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
D ++ +F+ +D + ++VRPR L+Y+A+DGV+P K++QQRS
Sbjct: 40 QAAALVTSGGVDCTDIDAAIIQRVFDLLDDIVLKLVRPRSLVYLAVDGVSPMGKLSQQRS 99
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R ++ P + G+ +DSN I+ GT FM+ L+ LH
Sbjct: 100 RRRRRRRQD---------------------PHSQAHGTEWDSNSISVGTSFMSSLANALH 138
Query: 177 YYIHDRLNN----------------DPGWK-------GIKVILSDANVPGEGEHKIMDYI 213
+Y R D G I ++ PGEGE KI D I
Sbjct: 139 FYCVSRTEQVNVERLREHRRRSRPVDIGSSLTEEQPPLITFVVDGVWRPGEGECKITDAI 198
Query: 214 RKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHE 273
R+ R+QP++DPNT H +C +D D+ + L HEP+ ++R E P
Sbjct: 199 RRFRSQPNYDPNTSHVICSSDTDMTVCSLILHEPHIHVLRYEHAPR-------------- 244
Query: 274 MKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYS--------- 324
G + + G F ++ RE L L +
Sbjct: 245 -----GTSKGVSDGWTRSAGDSWASTFFSINAFREELRSRLRLERCANNTDTAGGVERCD 299
Query: 325 --FERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNL 363
FE AL D VF+ GNDFLP + I EG +D L+ +
Sbjct: 300 RLFESALHDVVFVLLLFGNDFLPSV-GCRIEEGFLDSLLEM 339
>gi|307109532|gb|EFN57770.1| hypothetical protein CHLNCDRAFT_143098, partial [Chlorella
variabilis]
Length = 234
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 122/279 (43%), Gaps = 89/279 (31%)
Query: 3 VPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDM------- 55
+P F+RWLS +YP V Q +P DNLYLDM
Sbjct: 4 IPKFYRWLSERYPLV--------NQPGGATVVPI-----------IDNLYLDMVSEAAGG 44
Query: 56 ------------------------------NGIIHPCTHPEDKPAPKDEDEMMVAIFECI 85
NGIIH CTH + E+EM++ IF +
Sbjct: 45 SMGAAKGSSSSSSARRAHAACRCLRQGGAPNGIIHNCTHGNNPDVRLTEEEMILKIFTYL 104
Query: 86 DRLFRIVRPR----KLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLA 141
D+LF IV+P+ KLL+MAIDG APRAKMNQQR+RRF++++E E + R E
Sbjct: 105 DKLFHIVKPQAGGGKLLFMAIDGSAPRAKMNQQRARRFKSAREAQEAMEAAVRRGE---- 160
Query: 142 DGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANV 201
P E + FDSNCITPGT L C G +L DA +
Sbjct: 161 ------PVPEPDARFDSNCITPGT-REGTLPRC----------------GTLCMLGDAAL 197
Query: 202 PGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
K+R PD+ PN +HCL G DADLIML
Sbjct: 198 RCAALRCAALPCWKRR--PDYAPNMRHCLYGLDADLIML 234
>gi|196007658|ref|XP_002113695.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
gi|190584099|gb|EDV24169.1| hypothetical protein TRIADDRAFT_26537 [Trichoplax adhaerens]
Length = 142
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 21/122 (17%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFRW+S +YP + Q + +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFFRWISERYPCL--------SQIIKEHQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D A E+++ + IF I+ LFRI++PRK+L+MAIDG+APRAKMNQQRSRR
Sbjct: 42 NCSHPDDANAHFRISEEKIFLDIFSYIEVLFRIIKPRKVLFMAIDGIAPRAKMNQQRSRR 101
Query: 119 FR 120
FR
Sbjct: 102 FR 103
>gi|406601834|emb|CCH46557.1| 5'-3' exoribonuclease 1 [Wickerhamomyces ciferrii]
Length = 491
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 200/491 (40%), Gaps = 130/491 (26%)
Query: 45 GMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDG 104
G + DNLY+DMN I H C D + KD ++++A + + + P KLLY+AIDG
Sbjct: 22 GKQCDNLYIDMNCIFHICLR--DAKSEKDFKDLILAHLQMVTAAYC---PHKLLYIAIDG 76
Query: 105 VAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPG 164
V P K+ Q RR K G+ D N +TPG
Sbjct: 77 VPPLGKLKGQALRRQSYIKS----------------------------GNGIDPNALTPG 108
Query: 165 TPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
T FM LS + L +KVI+SD+NVPGEGE KI+++IR+Q D
Sbjct: 109 TEFMNMLSQFITKCTGSHLPKLSS--NVKVIISDSNVPGEGEFKIVNHIREQ------DI 160
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
+ + + G DADLI L L+ + + R+++K G ++C
Sbjct: 161 DMKVVIYGIDADLIALSLSLKQRQVFLARQKYKR---------GVTTSRSRQC------- 204
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERA--------LDDWVFMC 336
E++ V S+ ++LE PYS E+ L D V +
Sbjct: 205 ------------EYLIVS-SLKNKFLE----------PYSNEQKSSLNTTNILKDIVLLL 241
Query: 337 FFVGNDFLPHLPSLEIREGA-------VDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVK 389
+GNDFLP L + + R KT+ K ++ + + ++
Sbjct: 242 ILLGNDFLPKPEGLYVNSDTYYELSWFLQRFHREENKTIIK-DNRIDTDVFTKFLKKFIE 300
Query: 390 RSFDDVDESS--------------------------EEEESNDEVRLWE--DGFKDRYYE 421
F DES+ +EEE+ ++ E + K + YE
Sbjct: 301 FDFQTFDESTIMDQKVIDEKIISIKLAGISISNTEKDEEENVKKLAQMECFEEHKKKVYE 360
Query: 422 SKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVD 481
D+ L + +Y GL WVL+YY C S+ + +P+ APF SD + + + D
Sbjct: 361 QNLCEKYDE----LELIKQYYKGLHWVLRYYLGKCPSYDYVYPYDNAPFLSDLVKVNQ-D 415
Query: 482 TNFETGTQPVN 492
F T+P+N
Sbjct: 416 VEF-VNTEPIN 425
>gi|123490419|ref|XP_001325606.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
gi|121908508|gb|EAY13383.1| XRN 5'-3' exonuclease N-terminus family protein [Trichomonas
vaginalis G3]
Length = 939
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 196/491 (39%), Gaps = 100/491 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV F RWL+ +YP D SKP FD Y+D N II+
Sbjct: 1 MGVTFFTRWLAERYPLAFRQMD--------------DVSKPT-----FDCFYIDFNAIIY 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + + D ++ I +D + +IVRP KL+Y+++DG P AK + RS R
Sbjct: 42 FALSYYNPESEGNFDGIITEIIRYLDTIIQIVRPTKLIYLSVDGTPPYAKCVRNRSSRLA 101
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ +K+ S I G+ FM +L L I
Sbjct: 102 G-----------------------FMKNQKQDKSQIQFE-IVAGSVFMEKLHQELIKTIE 137
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+++ D W K I S +VPGE EHKI +IR Q + + H + D+D I L
Sbjct: 138 NKVKTDIAWSTPKFIYSSYHVPGEAEHKITKFIRDSTTQNNFLNDYVHLVFSVDSDTIFL 197
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
L G MK V + N +V S F
Sbjct: 198 LL----------------------------GLNMKYLVTMREAKN-FTVNEKSSSSAFEL 228
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
+ +S+++EY+ +EL S R ++D++ + F GNDF+P L + +
Sbjct: 229 IYISIIQEYIMEELK--------SDRRIINDFIALVFLCGNDFIPEFSELPSSPETFESI 280
Query: 361 VNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDV-----DESSEEEESNDEVRLWEDGF 415
++ Y KT+ K + EN ++ FD + + S ++D ++ + F
Sbjct: 281 LDCYVKTI-KEKGLFLLNENRKFLFENLEMLFDKIMLNAAIKGSTTSCASDNLK---EHF 336
Query: 416 KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFI 475
D Y F +++ + + E+VL YY+ SW + +P+ ++P S +
Sbjct: 337 PDEYKNQDF---VNELLEQTLTNFEFVLS------YYFGKTPSWSYCYPYEHSPPFSFLL 387
Query: 476 NIAE--VDTNF 484
N + +TNF
Sbjct: 388 NALKNHKETNF 398
>gi|340501949|gb|EGR28676.1| hypothetical protein IMG5_170600 [Ichthyophthirius multifiliis]
Length = 698
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 130/267 (48%), Gaps = 41/267 (15%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP +F W+ R+YP C+ Q +G+K D + N + + D+N +
Sbjct: 1 MGVPGYFGWICRRYP----FCIRKIYQ--SGKKKYVDCLYIDVNSFCYQYIKDDLNQYL- 53
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
P+ D++ I I+ + +++ P+ +Y+ +DG PRAKMNQQR RRF
Sbjct: 54 --------LNPQSLDQIYQNILTHIESIIQLIEPQSQVYLMMDGTCPRAKMNQQRQRRFH 105
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
A K + + +E G + K SN ++PGTPFM L+ + +
Sbjct: 106 AQK-------NLNQTKEDFKNQGIQI-----KEQTVPSNSVSPGTPFMFELNKRIREHFE 153
Query: 181 DRLN--------NDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCG 232
++ D +K + +I+SD+N GEGEHKI++ IRK + + HC+
Sbjct: 154 KKIQEEQPLNEKTDFTYKRLHIIISDSNCQGEGEHKILEVIRKHK-----NFKLTHCIVS 208
Query: 233 ADADLIMLGLATHEPNFTIIREEFKPN 259
DADLI+L L+ I+RE+ +PN
Sbjct: 209 PDADLILLSLSAIGRKILILREQ-RPN 234
>gi|440796943|gb|ELR18040.1| 5'3' exoribonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 1117
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 171/413 (41%), Gaps = 99/413 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHC---VEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNG 57
MG+ F +WL + YP HC V D P+ + P + + P FD++Y+D+NG
Sbjct: 1 MGIAGFQKWLEKHYP----HCFIPVPDAPR----RPAPGERAPPAVKDY-FDHIYVDLNG 51
Query: 58 IIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
IH +E+++ +F +D LF++ R+ +++AIDG A AK+ QR R
Sbjct: 52 YIHTVGR-----RAANEEQLFTLLFRELDGLFKVCVARQSIFLAIDGPASAAKLITQRKR 106
Query: 118 RF-------RASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAR 170
R R +K A+ +VA + A K+KG F+ +T GTPFM R
Sbjct: 107 RLGAASKQDRQAKAKAQPQPQVAESEAQTGAPAVSKKRVKKKGE-FNLLQVTAGTPFMYR 165
Query: 171 LSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYI-RKQRAQPDHDPNTQ-- 227
L L ++ RL +DP + ++ +S +VPGEGE KIM++I A PN Q
Sbjct: 166 LKNALCFWACSRLQSDPKYHFTRIYISGPDVPGEGELKIMEFIVSHANADSSPPPNPQER 225
Query: 228 ----------------------HCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCD 265
H + G DADLI+LGL++ N I+
Sbjct: 226 VFAYQTGFADQERNAEKFRRDSHLIVGTDADLILLGLSSMLQNVFILNT----------- 274
Query: 266 VCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSF 325
Q G K S+ F +E F PF
Sbjct: 275 ---QRGQSSKLLF---------SIWEFCRSLEHSF-------------------PFRGHC 303
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYKTQEQLRQE 378
D+V + GND+LP L R ++DRL YKK K Q Q Q+
Sbjct: 304 NMTRLDFVLISLLQGNDYLPKL-----RGASLDRLWARYKK--LKQQPQFHQQ 349
>gi|74184155|dbj|BAE37081.1| unnamed protein product [Mus musculus]
Length = 109
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 83/127 (65%), Gaps = 21/127 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EFDNLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFDNLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FRASKET 125
FR++KE
Sbjct: 102 FRSAKEA 108
>gi|312085747|ref|XP_003144802.1| hypothetical protein LOAG_09226 [Loa loa]
Length = 1443
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 91/166 (54%), Gaps = 28/166 (16%)
Query: 210 MDYIRKQRAQPDHDPNTQHCLCGADADL-----IMLGLATHEPNFTIIREEFKPNQARPC 264
MD+IR +R++ D+D NT+HCL G DADL IMLG+ +HEP+F ++REE K + R
Sbjct: 1 MDFIRSERSRSDYDANTRHCLYGLDADLASFLQIMLGICSHEPHFALLREEVKFGRQR-- 58
Query: 265 DVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAM--PNLPFP 322
H K G++ E+ F + LS+LREYL E LPF
Sbjct: 59 ------NHNGKHKTGVN-------------EITFHLLHLSLLREYLSWEFHSLKEKLPFE 99
Query: 323 YSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
Y E +DDWV M F VGNDF+PHLP + I E A+ L Y + +
Sbjct: 100 YDLESVIDDWVLMGFLVGNDFIPHLPHVHIHEDALPLLYATYNEVL 145
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 441 YVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFE 485
Y+ + W L YYY GC SW W++P HYAP+ SD + AE++ NF+
Sbjct: 330 YIRAIQWNLHYYYHGCCSWSWFYPHHYAPYISDVSDFAEMEMNFD 374
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
SPIIDFYPE F DLNGKK W+ V L+PF+ E+RL +A+A
Sbjct: 410 SPIIDFYPEQFDTDLNGKKNDWEAVVLIPFIREDRLLQAMA 450
>gi|322511261|gb|ADX06572.1| putative XRN family 5'-3' exonuclease [Organic Lake phycodnavirus]
Length = 467
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 195/451 (43%), Gaps = 110/451 (24%)
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 108
DNLYLD N II+ D+P I++ I + +P++ + DGVAP
Sbjct: 26 DNLYLDANSIIYDQIQKGDEPYEH--------IYQAIMTIINKFQPKQTR-ICFDGVAPL 76
Query: 109 AKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 168
AKM QQ+ RR++ + + +K+L + S F++NCITPGT FM
Sbjct: 77 AKMVQQKQRRYK------------SHLTKKIL----------NQSSSFNTNCITPGTLFM 114
Query: 169 ARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQH 228
L+ Y+ ++L+ND ++LS ++ PGEGE+KI +IR + ++ H
Sbjct: 115 NGLNV----YLKEKLDNDTT-----IVLSGSDEPGEGEYKIFQHIRTCKNNQEN-----H 160
Query: 229 CLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
+ G DADLIML L ++ + + L E
Sbjct: 161 IIYGLDADLIMLSLL-----------------------------QLPKQIYLYRETKYFK 191
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+ + E + + +S+L E + + +++ N + F+CFF GNDFLPH P
Sbjct: 192 YLNYIQENQDYLLDVSLLGEQICQSMSIEN-------------YCFLCFFCGNDFLPHFP 238
Query: 349 SLEIREGAVDRL------VNLYKK------TVYKTQEQLRQEENGGGGGRGVKRSFDDVD 396
S+ IR +D L +NL + +Y E+L ++E+ + ++
Sbjct: 239 SINIRNHGIDHLLEHALSLNLIQNHKIVWSELYILFERLSKQEHERIAQQIQWKTTRKAH 298
Query: 397 ESSEEEESNDEVRLWEDGFKD--RYYESKFDVPKDDIAFRLM----VGHEYVLGLCWVLK 450
+ E+ N + L++ +D + + K+++ I FR + +Y+ L W
Sbjct: 299 NITHEDRLN-YLPLYDHDEEDYLKAHPDKYNM----ILFRQHNDQSICKQYLEMLEWTWD 353
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVD 481
YY Y+P YAP +N +D
Sbjct: 354 YYIGNPIDLYKYYPMGYAPLFQSLLNEISID 384
>gi|238613508|ref|XP_002398460.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
gi|215475037|gb|EEB99390.1| hypothetical protein MPER_00943 [Moniliophthora perniciosa FA553]
Length = 98
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Query: 22 VEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAI 81
VED+ E+ IP + + PNPNG EFD LYLDMNGI+HPCTHPE KPAP+ E++MMV +
Sbjct: 11 VEDENNEL--VTIPTNMADPNPNGTEFDCLYLDMNGIVHPCTHPEGKPAPETEEDMMVEV 68
Query: 82 FECIDRLFRIVRPRKLLYMAIDGVAPRAKM 111
F+ +R+ +VRPRKLL+MAIDGVAPRAKM
Sbjct: 69 FKYTERVVNMVRPRKLLFMAIDGVAPRAKM 98
>gi|68067452|ref|XP_675691.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495020|emb|CAH99326.1| hypothetical protein PB000181.03.0 [Plasmodium berghei]
Length = 167
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 22/168 (13%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEV---------NGQ------------KIPFDSS 39
MGVP F++WL +YP + E + +V NG+ +
Sbjct: 1 MGVPTFYKWLVTRYPKIAKAVYETRDNDVYIRRARINENGEFYKVCDLGAYVNNTDENHC 60
Query: 40 KPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLY 99
N NG FDN+YLDMNGIIH C+H + K ++E+ + IF I+RLF I+ P+KLLY
Sbjct: 61 SDNVNGY-FDNMYLDMNGIIHLCSHGDGSKKVKTDEEIFLNIFLYIERLFDIIEPQKLLY 119
Query: 100 MAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILP 147
MAIDGVAP+AKMNQQRSRRF++ + + +R K L++ +P
Sbjct: 120 MAIDGVAPKAKMNQQRSRRFKSILASEIEKRAYIELRNKFLSENRNVP 167
>gi|444523968|gb|ELV13670.1| 5'-3' exoribonuclease 1 [Tupaia chinensis]
Length = 592
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 23/141 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RW+S +YP C+ + +E +IP EF NLYLDMNGIIH
Sbjct: 1 MGVPKFYRWISERYP-----CLSEVVKE---HQIP-----------EFANLYLDMNGIIH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP D +D++ IF ++ LFRI++PRK+ +MA+DGVAPRAKMNQQR RR
Sbjct: 42 QCSHPNDDDVHFRISDDKIFTDIFHYLEVLFRIIKPRKVFFMAVDGVAPRAKMNQQRGRR 101
Query: 119 FR--ASKETAEKIAEVARIRE 137
FR A +ET + ++ +RE
Sbjct: 102 FRVCAPEETTFHLLHLSLMRE 122
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 295 EVEFIFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
E F + LS++REY++ E + + F Y ER +DDW+ M F VGNDF+PHLP L I
Sbjct: 109 ETTFHLLHLSLMREYIDYEFSALKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHI 168
Query: 353 REGAVDRLVNLY 364
A+ L Y
Sbjct: 169 NHDALPLLYGTY 180
>gi|356533625|ref|XP_003535362.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
Length = 351
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 83/121 (68%), Gaps = 10/121 (8%)
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
DADLIML LATHE +F+++RE+ C +CGQ+GH +C D + +S I
Sbjct: 220 DADLIMLSLATHEVHFSVLRED-------KCFLCGQVGHFAADCQAEDFDTPDDSSI--- 269
Query: 294 SEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIR 353
+ ++ F+ + VLREYL+ EL +PN PF ER +DD+VF+CFFVGNDFLPH+P+LEIR
Sbjct: 270 HKKKYEFLNIWVLREYLQFELEIPNPPFEIDIERIVDDFVFLCFFVGNDFLPHMPTLEIR 329
Query: 354 E 354
E
Sbjct: 330 E 330
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Query: 69 PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEK 128
PAP D++ +IF+ ID L+ +VRPRKLLY+AIDGVAPRAKMNQQRSRRFR +K+ AE
Sbjct: 121 PAPATYDDVFKSIFDYIDHLYSLVRPRKLLYLAIDGVAPRAKMNQQRSRRFRTAKDVAEA 180
Query: 129 IAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFM 168
AE R+R+K +++G +L K+K DSN ITPGT FM
Sbjct: 181 EAEEERLRKKFMSEGKVL-SSKDKPETSDSNVITPGTQFM 219
>gi|71656489|ref|XP_816791.1| 5'-3' exonuclease XRNC [Trypanosoma cruzi strain CL Brener]
gi|70881942|gb|EAN94940.1| 5'-3' exonuclease XRNC, putative [Trypanosoma cruzi]
Length = 282
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 125/285 (43%), Gaps = 68/285 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL R++ F SS P D LY+D+NG+++
Sbjct: 1 MGVPLLLTWLKRRFAPC------------------FLSSSSCPAA---DCLYIDVNGLVY 39
Query: 61 PCTHPEDKPAPKDED---EMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKMNQQRS 116
D ++ +F+ ID + R+VRPR L+Y+A+DG++P K+ QQRS
Sbjct: 40 QAAALATASEASAVDIDAAILRKLFDIIDDIVLRLVRPRFLVYLAVDGISPMGKLAQQRS 99
Query: 117 RRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLH 176
RR R S + V +DSN I+ GTPFM+RL+ LH
Sbjct: 100 RRRRRSGGGSRGRNAV----------------------EWDSNSISVGTPFMSRLTEALH 137
Query: 177 YYIHDRLNNDPGWK---------------------GIKVILSDANVPGEGEHKIMDYIRK 215
+Y R G + I I+ D PGEGE KI D IR+
Sbjct: 138 FYCASRAERINGERLRDELQQVARGNTTGGDVPVTPITFIVDDVWRPGEGESKIADAIRR 197
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
R+Q +DPNT H +C +D D+ + L HEP ++R E P+
Sbjct: 198 FRSQSTYDPNTSHVICSSDTDVTVCSLILHEPRIHVLRYECSPSH 242
>gi|291336199|gb|ADD95772.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C195]
Length = 293
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 148/317 (46%), Gaps = 60/317 (18%)
Query: 74 EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVA 133
E++++ + I ++P + +Y+A DGVAP AKMNQQR+RR + KI V
Sbjct: 31 ENKLIQCVINTIGIYIEYIQPSETVYIAFDGVAPFAKMNQQRTRRHKGM--ITSKINNVI 88
Query: 134 RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGI- 192
+ E + K SH ITPGT FM +LS + G G+
Sbjct: 89 GVNENQM---------KWTTSH-----ITPGTLFMNKLSN----RVTKAFGGLEGHYGVK 130
Query: 193 KVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHE--PNFT 250
K+I+S ++ GEGEHK+ Y+R + D +T + G D+DLIML L E N
Sbjct: 131 KIIVSCSDEAGEGEHKLFQYVRSHK---DTFQDTNMVIYGLDSDLIMLSLFHCEMFKNLY 187
Query: 251 IIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYL 310
I RE P + G+ +E ++++++ + L +
Sbjct: 188 IFRE--TPEFGK----------------GILSEEQ--------CSMDYMYMHIHSLARAI 221
Query: 311 EKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVYK 370
E++ + L D++FMCF +GNDFLPH PSL IR ++ L++ YKK
Sbjct: 222 LIEMSCDEGQYF-----RLYDYMFMCFLLGNDFLPHFPSLNIRTMGIEVLLDNYKKISEI 276
Query: 371 TQEQ---LRQEENGGGG 384
T ++ LR+ ++ G G
Sbjct: 277 TVKRCLFLRKRKSNGNG 293
>gi|195164006|ref|XP_002022840.1| GL14782 [Drosophila persimilis]
gi|194104863|gb|EDW26906.1| GL14782 [Drosophila persimilis]
Length = 1039
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 82/124 (66%), Gaps = 21/124 (16%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FFR++S +YP C+ + +E IP EFDNLYLDMNGI+H
Sbjct: 1 MGVPKFFRYISERYP-----CLSELARE---HSIP-----------EFDNLYLDMNGIVH 41
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
C+HP+D +E ++ IF +D+LF +++P+KL ++A+DGVAPRAKMNQQRSRR
Sbjct: 42 NCSHPDDNNIHFHLEEQQIFQDIFNYVDKLFYLIKPQKLFFLAVDGVAPRAKMNQQRSRR 101
Query: 119 FRAS 122
FR++
Sbjct: 102 FRSA 105
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 93/211 (44%), Gaps = 58/211 (27%)
Query: 334 FMCFFVGNDFLPHLPSLEIREGAVDRL--------------------VNLYKKTVYKTQ- 372
M F VGNDF+PHLP L I A+ L +NL + ++ T
Sbjct: 112 LMGFMVGNDFIPHLPCLHISSNALPLLYKTYIRIYHSLGGNINEHGKLNLQRLQIFMTAL 171
Query: 373 -----EQLRQEENGGGGGRGVKRSFD-DVDESSEEEESNDEVRLWED------------- 413
EQ ++ + G +FD DV E S ++ + +++ D
Sbjct: 172 SEVELEQYKEHADDLKYANGNTEAFDIDVGEISSSKDYDSDLKALIDDSTQLYNDDSDED 231
Query: 414 -------------GFKDRYYESKFDV---PKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR 457
+K YY +KF++ P + + L GH YV L W+L YYY+G +
Sbjct: 232 LSDEEAGVLKDFQNYKRNYYRNKFNLSSRPPNQLIEEL--GHHYVTALQWILDYYYRGVQ 289
Query: 458 SWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
SW WY+PFHYAPF SD NIA V F+ GT
Sbjct: 290 SWDWYYPFHYAPFISDLNNIATVQIKFQLGT 320
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SP+ +FYP DFK DLNGKK W+ V L+PF+DE L + LS E
Sbjct: 353 SPLAEFYPTDFKSDLNGKKNDWEAVVLIPFIDECLLLSVMRACEAHLSTAE 403
>gi|389601315|ref|XP_001565132.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504991|emb|CAM36567.2| putative 5'-3' exonuclease XRNC [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1065
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 190/469 (40%), Gaps = 138/469 (29%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL +++ +P DS+ N DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRFADCF---------------MPADSAVTNYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCTHPEDKPAPKDE--DEMMVAIFECIDRLF-RIVRPRKLLYMAIDGVAPRAKM 111
TH + + DE D ++ +F+ +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSHRFSSVDEVEDVVLRKLFDLLDDLVSNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
+QQR+RR R ++ + + P +DSNCI+ GT FMA++
Sbjct: 106 SQQRARRRRGARRQPSAWPSSSFHHHE---------PAGNINDLWDSNCISVGTRFMAKV 156
Query: 172 SACLHYYIHDRLNNDPGWK----GIKVILSDANV-------------------------- 201
+ LH+Y R + +++ +DA+V
Sbjct: 157 TEALHFYAVSRTERINAKRLREERVRIASADASVDSAARDSAGLPYAFPFLNIIVDDVLR 216
Query: 202 PGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE------ 255
PGEGE+KI ++IR+ RA + PNT H +C +D D+ + L HEP ++R E
Sbjct: 217 PGEGENKIAEFIRRIRADSSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYEPPASLG 276
Query: 256 ---------------------------------FKPNQARPCDVCGQMGHEMK------- 275
P+ P V G+ GH +
Sbjct: 277 GRPPMKTQPPPQHHHHHRNHHGHVRFSSHPHRGGGPSLHGPRRVDGRGGHAHRGPPRSSP 336
Query: 276 -ECVGLDAEPN--PESVITFGSEVEFIFVRLSVLREYLEKELAM-PNLPF---------- 321
C G A+P+ +S ++ F + V R+ L + L M P
Sbjct: 337 GHCTGAAAQPSHVKDSWLS-------TFFSIHVFRQRLREILHMSPGDDTATAVADAAVS 389
Query: 322 -------PYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNL 363
+FE AL D VF+ GNDFLP + I+EG +D L++L
Sbjct: 390 PVDAEEATLTFEHALHDVVFVLLLFGNDFLPTIGG-SIQEGTLDALLSL 437
>gi|336373302|gb|EGO01640.1| hypothetical protein SERLA73DRAFT_132069 [Serpula lacrymans var.
lacrymans S7.3]
Length = 70
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 63/70 (90%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNGI+HPCTHP++KPAP+ E+EMMV IF +R+ +VRPRK+L+MAIDGVAPRAKMNQQ
Sbjct: 1 MNGIVHPCTHPDNKPAPETEEEMMVDIFSYTERVVNMVRPRKVLFMAIDGVAPRAKMNQQ 60
Query: 115 RSRRFRASKE 124
RSRRFR+++E
Sbjct: 61 RSRRFRSAQE 70
>gi|219125787|ref|XP_002183154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405429|gb|EEC45372.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 151
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 86/142 (60%), Gaps = 18/142 (12%)
Query: 1 MGVPAFFRWLSRKYPSVIVH--CV--EDKPQEVNGQKIPFDSSKPNPNGM-----EFDNL 51
MGVP FFRWLS +YP VI C + QE G P + KP+P E D L
Sbjct: 1 MGVPKFFRWLSERYPKVIQRHGCPPNAETTQEHFGTDPPANMPKPDPLSTCGLAPEIDRL 60
Query: 52 YLDMNGIIHPCTH--------PEDKPAPKDEDEMMVAIFECIDRLFR-IVRPRKLLYMAI 102
Y+DMNGIIH C+H E+ A EDE+ I +DR+ + I +P++L+YMAI
Sbjct: 61 YIDMNGIIHGCSHNNSEAEENGEEGVANISEDEIFRNICYYLDRVVKDIAKPKQLVYMAI 120
Query: 103 DGVAPRAKMNQQRSRRFRASKE 124
DGVAPRAK+NQQRSRR+R+ KE
Sbjct: 121 DGVAPRAKLNQQRSRRYRSGKE 142
>gi|284504336|ref|YP_003407051.1| XRN1 5'-3' exonuclease [Marseillevirus]
gi|282935774|gb|ADB04089.1| XRN1 5'-3' exonuclease [Marseillevirus]
Length = 490
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 130/529 (24%), Positives = 195/529 (36%), Gaps = 142/529 (26%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F W+ +++ + +P EV DNLY+D +H
Sbjct: 1 MGVPGLFYWIQQRHAQHTRTIQKREPIEV-------------------DNLYIDAVCFVH 41
Query: 61 PCTHP--------------EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 106
C ++ + E E+ I L + VRP K Y+ DGV+
Sbjct: 42 TCAQDVYGYGNSVSFSETYKNFTEKQKELEVFRLTRNAIFALTKYVRPTKRFYVLFDGVS 101
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
P AK +QQR RRF S P E FD N IT GT
Sbjct: 102 PVAKQSQQRHRRFLGS------------------------PTEG-----FDPNSITCGTE 132
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT 226
F+ RL Y+ L N + ++I SD ++ GEGEHK + + R+ + P
Sbjct: 133 FLDRLQG----YVRRGLENFCSKEKFELIFSDTSIAGEGEHKALFFARQ------NGPEE 182
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP 286
HC D DL++L + P ++R+ D Q H + + G+ E
Sbjct: 183 SHCFYSPDGDLVILAMTLEFPKTFLLRK----------DHIQQWRHLLTDISGISQE--- 229
Query: 287 ESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
EKE+ + D+VF+ +GNDFLP
Sbjct: 230 -----------------------FEKEI-------------PIKDFVFLSCLLGNDFLPR 253
Query: 347 LPSLEIR-EGAVDRLVNLYKKT-----VYKTQEQLRQEENGGGGGRGV--KRSFDD---V 395
L E + + L+ YK+ KT + L + G K FD+
Sbjct: 254 LGMFEGKFSDTAEFLLAKYKQKGLHIFSRKTGKFLAKNTFKILKFLGTFEKELFDERCYF 313
Query: 396 DESSEEEESNDEVRL----WEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKY 451
+ + ++EE D L + G Y+ +F + K EY+ G WV Y
Sbjct: 314 ELTKQKEERVDRTLLSAYDGKSGVDMDKYKEEFGLKKQRSN---QQTREYLRGCLWVTLY 370
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQPVNNNRILKFI 500
Y QGC W + + Y PF SD I + D E Q + +N+ + +
Sbjct: 371 YTQGCPDNGWSYKYFYPPFLSD---IEQEDLVHEPFEQTLAHNQFSQLL 416
>gi|154422101|ref|XP_001584063.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918308|gb|EAY23077.1| hypothetical protein TVAG_183130 [Trichomonas vaginalis G3]
Length = 859
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 178/422 (42%), Gaps = 77/422 (18%)
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 107
++ LY+D + ++ + +E + F D L +++P L+Y+A++G P
Sbjct: 29 YNCLYIDASTLLVAAISIKSSKLNTLNEENITFAFHLFDSLVHLLQPTDLIYIALEGSQP 88
Query: 108 RAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPF 167
+K +R ++ + I + IR N P
Sbjct: 89 ISKTYATHNRFYQRNM-----IEQHDSIR----------------------NLFQPH--- 118
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
L +I +++ ND WK KVI + + VPGE E KI DYIR++ +PD D N +
Sbjct: 119 -------LKSWIQEKIKNDDIWKRPKVIFAGSAVPGEAETKIFDYIRQEMNKPDWDLNKR 171
Query: 228 HCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPE 287
HC+ D+DLI++ L +H NF +I + ++ N R P
Sbjct: 172 HCIFTPDSDLILMTLRSHIQNFDLIYQNYRFNLVR-------------------GTRTPN 212
Query: 288 SVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHL 347
IT S + +++LREYL+ L F + E+ DD+V +C +G+D+
Sbjct: 213 FPITPSS---LTVISINILREYLK-------LDFEIADEQIFDDFVTICDILGSDYCA-- 260
Query: 348 PSLEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDE 407
P ++ ++ L+ YK + + +K + + + E +S
Sbjct: 261 PLEDVVNLDLESLIQSYKSEPHCN----FITDCDNFNFDNLKIFLNKILKHIAERKSTTY 316
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
+ E K+ Y+E++ P++ + H + L +++K Y G SW W + +H+
Sbjct: 317 TKYVEKQRKN-YFETRKVTPEETEK----ISHCVLDSLLYIVKSYAIGIPSWSWVYQYHF 371
Query: 468 AP 469
AP
Sbjct: 372 AP 373
>gi|402576527|gb|EJW70485.1| hypothetical protein WUBG_18607 [Wuchereria bancrofti]
Length = 81
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 61/71 (85%)
Query: 81 IFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLL 140
IFE IDRLF IVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKE EK+ ++A IR +L
Sbjct: 3 IFEYIDRLFAIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKEAIEKVEQIAEIRSRLE 62
Query: 141 ADGCILPPEKE 151
++G LPPEK+
Sbjct: 63 SEGYPLPPEKK 73
>gi|327409880|ref|YP_004347300.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
gi|326785054|gb|AEA07188.1| XRN1 5'-3' exoribonuclease [Lausannevirus]
Length = 495
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 187/509 (36%), Gaps = 153/509 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F W+ +++ + + GQ DNLY+D +H
Sbjct: 11 MGVPGLFYWIQQRHSRYTKNIQK-------GQNT-------------VDNLYVDAVCFVH 50
Query: 61 PCTHP--------------EDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVA 106
C +D + E E+ ++ I RL + V P K Y+ DGVA
Sbjct: 51 TCAQDIYGYGKNISLSDTFKDMTEKQKEQELFRSVRNAIFRLTKYVTPTKKFYVVFDGVA 110
Query: 107 PRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTP 166
P AK NQQR RRF K + FD N IT GT
Sbjct: 111 PIAKQNQQRHRRFLGGKPSC----------------------------GFDPNSITCGTE 142
Query: 167 FMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNT 226
F+ RL Y+ L+N + ++ S ++ GEGEHK + + R ++
Sbjct: 143 FLDRLQR----YVERGLSNFCQKEKFDLVFSSSSEAGEGEHKALAFAR------NNGNGE 192
Query: 227 QHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNP 286
HC D DL++L +A +++R+ D Q + + + GL E
Sbjct: 193 SHCFYSPDGDLVLLTMALGFDKVSLLRQ----------DHIQQWKYLLTDISGLSQE--- 239
Query: 287 ESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPH 346
F +V + D+VF+ +GNDFLP
Sbjct: 240 -----FQKDV-------------------------------PIKDFVFLSCLLGNDFLPR 263
Query: 347 LPSLEIR-EGAVDRLVNLYKKTVYKTQEQLRQEENGG---GGGRGV--------KRSFDD 394
L E + + L+ YK + ++ E+ G G+ K FD
Sbjct: 264 LGMFESKFSDTAEFLIAKYK----EHGRRIFSEKTGNFIPARAFGLFSFLSTFEKELFDK 319
Query: 395 ---VDESSEEEESNDEVRLW----EDGFKDRYYESKFDVPK---DDIAFRLMVGHEYVLG 444
+ ++++EE D L ++G Y+ F K D AF +Y+ G
Sbjct: 320 RCVFELTAQKEERTDHTLLKSYSPQNGVDVEKYKEIFGSKKQREDSQAF------DYIRG 373
Query: 445 LCWVLKYYYQGCRSWKWYFPFHYAPFASD 473
WV YY++GC W + +HY PF SD
Sbjct: 374 CIWVTVYYFRGCPDNGWSYKWHYPPFLSD 402
>gi|118373913|ref|XP_001020149.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila]
gi|89301916|gb|EAR99904.1| XRN 5'-3' exonuclease N-terminus family protein [Tetrahymena
thermophila SB210]
Length = 874
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 177/440 (40%), Gaps = 133/440 (30%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP +F W+ RKYP + + NG+K D LY+D+NGI +
Sbjct: 1 MGVPGYFSWIHRKYPYQV------RKVRRNGRKKHIDC------------LYIDVNGICY 42
Query: 61 PCTHPEDK----PAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAI-------------- 102
E + PK + + + + ID + +V P+ +Y+ +
Sbjct: 43 QYARDEHQYNYLLKPKSLETIFKQVIDHIDSIIELVEPQLQVYLMLANPFQPNLSGFESY 102
Query: 103 ----------------------------DGVAPRAKMNQQRSRRFRASKETAEKIAEVAR 134
DG PRAKMNQQR RRF A
Sbjct: 103 FCMMRFKKNQFQLKLFAIFYIQKIILKKDGPCPRAKMNQQRQRRFHAE-------MHHLT 155
Query: 135 IREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRL----------- 183
++++L G + E +N I PGTPFM L+ L YI R+
Sbjct: 156 LKDELKKHGFDVKEET-----VPNNSIAPGTPFMYELNEQLRRYIETRIALSNKAMTDGE 210
Query: 184 ----NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
+ +K ++ ILSD+N PGEGEHKI++ HC+ GADADL++
Sbjct: 211 ADHKEHQVSYKKLQFILSDSNAPGEGEHKILELT--------------HCIVGADADLLL 256
Query: 240 LGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAE-PNPESVITFGSEVEF 298
L LAT I+RE K G KE L E +P+ + E E+
Sbjct: 257 LSLATIGKRILILRENSK--------FKGDKTDLEKELQKLKEELSHPQ--LDLHKEREY 306
Query: 299 IFVRLSVL-REYLEKELAM------PNLPF-PYSFERALDDWVFMCFFVGNDFLPHLPSL 350
V ++ L R L+K M NL + P S +DD+VF+ F GNDFLP +
Sbjct: 307 DLVDINGLKRVILDKYKKMFDNKQVQNLKYNPMSL---MDDFVFLSLFAGNDFLPRQNYM 363
Query: 351 EIRE------GAVDRLVNLY 364
+I+ +D+L+ Y
Sbjct: 364 QIKSEKGHKPNILDKLIEKY 383
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 440 EYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFINIAEVDTNFE---TGTQPVNNN 494
+Y+ G + L YY++G SW +++P +YAP D + E + FE TQP
Sbjct: 584 KYLEGFEFTLLYYFRGIEKASWNYFYPHYYAPLTQDVVEFLERNPKFEVKFVKTQPFQPY 643
Query: 495 RILKFILYHFDNKMFF 510
+ L IL H DN+
Sbjct: 644 KQLLAIL-HPDNEALL 658
>gi|322510814|gb|ADX06128.1| putative XRNA family 5'-3' exonuclease [Organic Lake phycodnavirus
1]
Length = 465
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 155/367 (42%), Gaps = 115/367 (31%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P++F ++ + + ++ N + NLYLD N II+
Sbjct: 1 MGIPSYFSYILKHHKHIL-----------------------KRNNIVCHNLYLDANSIIY 37
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
E + ++ I L ++ P+K ++ DGVAP AKM QQ+ RR++
Sbjct: 38 E--------HLNKEGNIYEHVYHSILNLQKLFSPKKT-FICFDGVAPLAKMVQQKQRRYK 88
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ L IL G+ D+N ITPGT FM L+ Y+
Sbjct: 89 S------------------LLTNTIL------GTQSDTNKITPGTLFMNELNT----YLR 120
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
D+++ ILS + PGEGE+KI ++R++ ++ +H H + G DADLIML
Sbjct: 121 DKMDT-------HTILSGTDEPGEGENKIFHFMRRE-SEDEH-----HIIYGLDADLIML 167
Query: 241 GLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEFIF 300
L + N+ I F + + + + + + +D G ++ I
Sbjct: 168 SLL--QQNYKI----FLYRETKYFEYLNYINKKYDYILDIDL---------LGKQICEIV 212
Query: 301 VRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRL 360
++++ F+CF GNDFLPH PS+ IR G ++ +
Sbjct: 213 ---------------------------DVEEYCFLCFLCGNDFLPHFPSINIRNGGIEYI 245
Query: 361 VNLYKKT 367
++ +KKT
Sbjct: 246 LHHHKKT 252
>gi|168067648|ref|XP_001785722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662628|gb|EDQ49457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 68
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 57/68 (83%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ KYP ++V +ED+ + G K+P D+++PNPNG+E+DNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADKYPLIVVDVIEDEQHVIEGVKVPIDTTQPNPNGLEYDNLYLDMNGIIH 60
Query: 61 PCTHPEDK 68
PC HPED+
Sbjct: 61 PCFHPEDR 68
>gi|339898255|ref|XP_003392512.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
gi|321399477|emb|CBZ08676.1| putative 5'-3' exonuclease XRNC [Leishmania infantum JPCM5]
Length = 1068
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 63/294 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL +++ +P DS+ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRFADCF---------------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCTHPEDKPAPKDE--DEMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKM 111
TH + DE D ++ +F+ +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSLRFNSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
+QQR+RR R ++ + + P +DSNCI+ GT FMA++
Sbjct: 106 SQQRARRRRGARRQPSASSSSPSRHHE---------PAGNINDLWDSNCISVGTRFMAKV 156
Query: 172 SACLHYYIHDR----------------------LNNDPGWKG--------IKVILSDANV 201
+ LH+Y R +++ G + +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDVLR 216
Query: 202 PGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
PGEGE+KI ++IR+ RA P + PNT H +C +D D+ + L HEP ++R E
Sbjct: 217 PGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYE 270
>gi|398015544|ref|XP_003860961.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
gi|322499185|emb|CBZ34256.1| 5'-3' exonuclease XRNC, putative [Leishmania donovani]
Length = 1068
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 63/294 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL +++ +P DS+ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRFADCF---------------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCTHPEDKPAPKDE--DEMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKM 111
TH + DE D ++ +F+ +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSLRFDSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
+QQR+RR R ++ + + P +DSNCI+ GT FMA++
Sbjct: 106 SQQRARRRRGARRQPSASSSSPSRHHE---------PAGNINDLWDSNCISVGTRFMAKV 156
Query: 172 SACLHYYIHDR----------------------LNNDPGWKG--------IKVILSDANV 201
+ LH+Y R +++ G + +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSAGAPYVFPFLSIIVDDVLR 216
Query: 202 PGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
PGEGE+KI ++IR+ RA P + PNT H +C +D D+ + L HEP ++R E
Sbjct: 217 PGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYE 270
>gi|401422387|ref|XP_003875681.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491920|emb|CBZ27193.1| putative 5'-3' exonuclease XRNC [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1070
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 65/295 (22%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL +++ +P DS+ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRFADCF---------------MPADSAVTDYIRRSTDNLFIDLNSFLY 45
Query: 61 ------PCTHPEDKPAPKDE--DEMMVAIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKM 111
TH + DE D ++ +F+ +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRTHRFHSVDEVEDVVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKETAEKIAEVA-RIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMAR 170
+QQR+RR R ++ + + R E P +DSNCI+ GT FMA+
Sbjct: 106 SQQRARRRRGARRQSSASPSSSFRHHE----------PAGNINDLWDSNCISVGTRFMAK 155
Query: 171 LSACLHYYIHDR----------------------LNNDPG--------WKGIKVILSDAN 200
++ LH+Y R +++ G + I +I+ D
Sbjct: 156 VTEALHFYAVSRTERINAKRLREERVRIDKADASVDSAAGDSTGESYVFPFISIIVDDVL 215
Query: 201 VPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
PGEGE+KI ++IR+ RA P + PNT H +C +D D+ + L HEP ++R E
Sbjct: 216 RPGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYE 270
>gi|367037641|ref|XP_003649201.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
gi|346996462|gb|AEO62865.1| hypothetical protein THITE_40223, partial [Thielavia terrestris
NRRL 8126]
Length = 120
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 13/112 (11%)
Query: 53 LDMNGIIHPCTH--PEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAK 110
LDMNGIIH CTH +D E+EM +AIF I+ LF ++P+KL +MA+DGVAPRAK
Sbjct: 1 LDMNGIIHNCTHKDSDDVHFRLSEEEMFIAIFNYIEHLFGKIKPKKLFFMAVDGVAPRAK 60
Query: 111 MNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCIT 162
MNQQR+RRFR + + R REK + +G LP E+ FDSNCIT
Sbjct: 61 MNQQRARRFRTA-------LDAERAREKAIREGKELPKEEP----FDSNCIT 101
>gi|157869656|ref|XP_001683379.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
gi|68126444|emb|CAJ04205.1| putative 5'-3' exonuclease XRNC [Leishmania major strain Friedlin]
Length = 1068
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 63/294 (21%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP WL +++ +P DS+ + DNL++D+N ++
Sbjct: 1 MGVPLLLTWLRKRFADCF---------------MPADSAVTDYIRESTDNLFIDLNSFLY 45
Query: 61 ------PCTHPEDKPAPKDEDEMMV--AIFECIDRL-FRIVRPRKLLYMAIDGVAPRAKM 111
TH + DE E V +F+ +D L +V+P+ L+Y+A+DGV+P KM
Sbjct: 46 QAATIITATHRSLRFNSVDEVENAVLRKLFDLLDDLVMNLVQPKALVYIAVDGVSPLGKM 105
Query: 112 NQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARL 171
+QQR+RR R ++ + P +DSNCI+ GT FMA++
Sbjct: 106 SQQRARRRRGARRQPSASPSSPFHHHE---------PAGNINDLWDSNCISVGTRFMAKV 156
Query: 172 SACLHYYIHDRL--------------------------NNDPG----WKGIKVILSDANV 201
+ LH+Y R ++ G + I +I+ D
Sbjct: 157 TEALHFYAVSRTERINAKRLREEQVRIDKADASVDSAASDSAGAPYVFPFISIIVDDVLR 216
Query: 202 PGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREE 255
PGEGE+KI ++IR+ RA P + PNT H +C +D D+ + L HEP ++R E
Sbjct: 217 PGEGENKIAEFIRRIRADPSYGPNTSHVICSSDTDVTVTSLILHEPRIHVLRYE 270
>gi|449017059|dbj|BAM80461.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 695
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 48/247 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F RW +PS +V V G+ P FD++ D+N +IH
Sbjct: 1 MGIAGFQRWYLENFPSTVV--------TVTGESAP----------EHFDHVLFDLNQLIH 42
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
++ D+ + +F +D + R+ P+K +++A DG AP AK+ Q+ RR
Sbjct: 43 LAAR-----VARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVL 97
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
S+ ++ R R ++++ D ++PGT M + +Y+
Sbjct: 98 ESR-------KLHRTR------------KRKRRCGVDVLSLSPGTELMQLTLQAVEFYVC 138
Query: 181 DRLNNDPG-WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIM 239
RL + ++ ++ ++S VPGEGE KI+DYI + DP + G+DADL++
Sbjct: 139 SRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRY-----VDPQHSVVVIGSDADLVV 193
Query: 240 LGLATHE 246
LGLAT +
Sbjct: 194 LGLATQK 200
>gi|123493433|ref|XP_001326289.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909201|gb|EAY14066.1| hypothetical protein TVAG_478910 [Trichomonas vaginalis G3]
Length = 868
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 146/313 (46%), Gaps = 52/313 (16%)
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L +I + +N D W+ +VI S + VPGE E KI D++R++ +P+ DPN +HC+ D
Sbjct: 113 LKRWIEELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTND 172
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
+DLI++ L +H PN I + ++ ++ + M E P + GS
Sbjct: 173 SDLILMSLRSHIPNIDIYNDIYQ----------NKIKNGMLE---------PYISFSAGS 213
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
V+ I + L LREYL + + + ER DD+V + ND+ P S ++ +
Sbjct: 214 -VDVININL--LREYLFHDFGIND-------ERIFDDFVLLVNLYSNDYRPKFDS-DLSK 262
Query: 355 GAVDRLVNLYK---KTVYKTQ------EQLR------QEEN---GGGGGRGVKRSFDDVD 396
++D L+ YK ++ T+ E+L+ E N + K S + D
Sbjct: 263 ISIDDLIETYKSEPSCIFITEKDNVNLEKLKIFIMKFMERNYLQEIQNQQQNKTSENQND 322
Query: 397 ESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGC 456
+++ EE++ + + KD Y+ + P++ + H + + + K Y G
Sbjct: 323 NTTKIEENHLDFESYIKSKKDEYFSKRKTTPEETEK----ISHCLIDSILFTYKEYSSGI 378
Query: 457 RSWKWYFPFHYAP 469
SW W + +H+AP
Sbjct: 379 PSWSWIYKYHFAP 391
>gi|398013576|ref|XP_003859980.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
gi|322498198|emb|CBZ33273.1| 5'-3' exonuclease, putative, partial [Leishmania donovani]
Length = 486
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 24/124 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL+RKYPS+++ + P +V+G LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVM---DSCPGDVHG-------------------LYIDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + + E + +I I+ L VRP+ ++Y+A+DGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQGEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 147 PPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRL----NNDPG-------------- 188
P + FDSNCI+PGT FM ++A + YI +L N+D G
Sbjct: 208 PAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPAAIN 267
Query: 189 -----WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLA 243
W G+ VI SD+N GEGEHKI D++R Q A P + + H + G DADLI L L+
Sbjct: 268 ATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLS 327
Query: 244 THEPNFTIIREE 255
H P I+R++
Sbjct: 328 LHIPRVVILRDQ 339
>gi|401418979|ref|XP_003873980.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490213|emb|CBZ25474.1| putative 5'-3' exonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1161
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 24/124 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL+RKYPS+++ + P +V+G LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVM---DSCPGDVHG-------------------LYIDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + ++E + +I I+ L VRP++++Y+AIDGV PRAK+NQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQRVIYIAIDGVVPRAKLNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 147 PPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRL---NNDPG--------------- 188
P + FDSNCI+PGT FM ++ + YI +L +D G
Sbjct: 209 PAAAASPAKFDSNCISPGTAFMDAVATAVRDYIRRKLAPKESDGGGEAVAEAGASPAATC 268
Query: 189 --WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHE 246
W G+ V+ SD+N GEGEHKI D++R Q A P + + H + G DADLI L L+ H
Sbjct: 269 AHWAGLTVVFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHI 328
Query: 247 PNFTIIRE 254
P I+R+
Sbjct: 329 PRVVILRD 336
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 42/181 (23%)
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV----YKT----QEQL 375
S + +DD++ + +GNDFLPHLPS+ E A+D L+++Y + V Y T + QL
Sbjct: 561 SNSKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPYGYLTGGEYEIQL 620
Query: 376 RQEENGGGGGRGVKRSFDDV------------------DESSEEEESNDEVRLWEDGFKD 417
Q E + R++ V D ++ E S + R W D +
Sbjct: 621 LQLER-------LFRAYAAVEAARFRQFVIQSGAMTPHDAATPELCSAADRRCWRDVYVR 673
Query: 418 RYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFI 475
S D A R YV G+ +V +YY SW WY+PFH+AP A D
Sbjct: 674 T--TSLRDEAGAQAACR-----SYVEGMRFVWRYYSSISLQVSWAWYYPFHHAPLALDIA 726
Query: 476 N 476
+
Sbjct: 727 D 727
>gi|146083592|ref|XP_001464783.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
gi|134068877|emb|CAM59811.1| putative 5'-3' exonuclease [Leishmania infantum JPCM5]
Length = 1158
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 76/124 (61%), Gaps = 24/124 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL+RKYPS+++ + P +V+G LY+D+NG+IH
Sbjct: 1 MGVPKFAAWLTRKYPSMVM---DSCPGDVHG-------------------LYIDLNGLIH 38
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + ++E + +I I+ L VRP+ ++Y+A+DGV PRAKMNQQR+RR
Sbjct: 39 PCCHDEHDPSVALRTQEEKLRSICLAIETLVVTVRPQHVIYIAVDGVVPRAKMNQQRARR 98
Query: 119 FRAS 122
+ +S
Sbjct: 99 YMSS 102
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 69/132 (52%), Gaps = 23/132 (17%)
Query: 147 PPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRL----NNDPG-------------- 188
P + FDSNCI+PGT FM ++A + YI +L N+D G
Sbjct: 208 PAAAASPAKFDSNCISPGTAFMDAVAAAVRDYIRHKLAPKKNDDGGKAEAEAGASPAAIN 267
Query: 189 -----WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLA 243
W G+ VI SD+N GEGEHKI D++R Q A P + + H + G DADLI L L+
Sbjct: 268 ATCAHWAGLTVIFSDSNTAGEGEHKIFDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLS 327
Query: 244 THEPNFTIIREE 255
H P I+R++
Sbjct: 328 LHIPRVVILRDQ 339
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 42/181 (23%)
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV--------------- 368
S + +DD++ + +GNDFLPHLPS+ E A+D L+++Y + V
Sbjct: 558 SNSKIIDDFIVLGVLLGNDFLPHLPSVYCGESAMDTLMDVYVRAVLPYGYLTGGEYDIRL 617
Query: 369 ---------YKTQEQ--LRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKD 417
Y E RQ G + D ++ E S ++ R W D +
Sbjct: 618 LQLERLLRAYAAVEAACFRQFAIQSG-------AMKPHDAATPELCSAEDRRCWRDVY-- 668
Query: 418 RYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFI 475
S D A R YV G+ +V +YY SW WY+PFH+AP A D
Sbjct: 669 LRTTSLRDEAGSQAACR-----SYVEGMRFVWRYYSSISLQVSWAWYYPFHHAPLALDIA 723
Query: 476 N 476
+
Sbjct: 724 D 724
>gi|218199347|gb|EEC81774.1| hypothetical protein OsI_25462 [Oryza sativa Indica Group]
Length = 188
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV AF+RWL+ +YP + VE+ + G +P D +PNPNG+EF+NLYLDMNGIIH
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEPVELEPGAFVPVDLCRPNPNGLEFNNLYLDMNGIIH 60
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
PC HPE PAP DE+ + L R + A G A + +Q R
Sbjct: 61 PCFHPEGHPAPTTYDEVFKFLVGFSTYLVRFLG-------AFSGAALKGNFVEQDECVAR 113
Query: 121 ASKETAEKIAEVARIREKL 139
K+ A+ + +++ + L
Sbjct: 114 NFKQAAKLLGLDSKLEKNL 132
>gi|83317922|ref|XP_731370.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491393|gb|EAA22935.1| very similar to mouse Dhm1 and Dhm2-related [Plasmodium yoelii
yoelii]
Length = 387
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 36/200 (18%)
Query: 306 LREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYK 365
+ Y+ K N+ F S R +DD VF+ F VGNDFLPH+P+++I EG+++ + N Y
Sbjct: 156 IATYINKLKKEKNIIF--SINRVVDDIVFLSFLVGNDFLPHIPNIDINEGSMNEIFNSYI 213
Query: 366 KTVYKTQEQ------------------LRQEENGGGGGRGVKRSFDDVDESSEEEESNDE 407
+YK L +E RG+ +++ E ++E++
Sbjct: 214 FYIYKYSNYITYKDKVHIERLKIVLKILSGQEFQYFKKRGIN---ENIPEFTDEKK---- 266
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHY 467
+K YY KF V D + +V +Y+ GL W L YY+ GC SW W +P+HY
Sbjct: 267 -------YKSYYYFHKFGVS-DSKEIQQIVK-KYIEGLFWNLHYYHFGCASWHWEYPYHY 317
Query: 468 APFASDFINIAEVDTNFETG 487
AP SD ++ + D FE G
Sbjct: 318 APLCSDLLSFEKSDFFFEKG 337
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFK 257
N HC+ G DADLIML L TH N I+R++FK
Sbjct: 10 NWNHCIYGLDADLIMLSLVTHLNNIFILRDKFK 42
>gi|260944868|ref|XP_002616732.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
gi|238850381|gb|EEQ39845.1| hypothetical protein CLUG_03973 [Clavispora lusitaniae ATCC 42720]
Length = 373
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 394 DVDESSEEEESNDEVRLWEDGFKDRYYESKFDV--PKDDIAFRLMVGHEYVLGLCWVLKY 451
D E + + D+VR E G++DRYYE+KF P++ R V Y+ G+ WVL Y
Sbjct: 274 DSAEPPSRKRALDDVRYLEAGYRDRYYEAKFGASSPEEVADIRKKVVRAYLEGISWVLLY 333
Query: 452 YYQGCRSWKWYFPFHYAPFASDFINIAEV 480
YYQGC SW+WYFP+HYAPFA+DF N+ E+
Sbjct: 334 YYQGCPSWQWYFPYHYAPFAADFTNLREI 362
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 324 SFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
+ ERA+DDWVFMCFFVGNDFLPH PSL +R+ +D LV +K+ +
Sbjct: 37 TLERAIDDWVFMCFFVGNDFLPHFPSLSVRDNGIDILVGCWKQVI 81
>gi|389600932|ref|XP_001563893.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504577|emb|CAM37939.2| putative 5'-3' exonuclease [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1108
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 73/125 (58%), Gaps = 26/125 (20%)
Query: 1 MGVPAFFRWLSRKYPS-VIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGVP F WL +KYPS V+ C P +V+G LY+D+NG+I
Sbjct: 1 MGVPKFAAWLRKKYPSMVMARC----PGDVHG-------------------LYIDLNGLI 37
Query: 60 HPCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSR 117
HPC H E P A + E+ + +I I+ L VRP+ LLY+AIDGVAPRAKMNQQR R
Sbjct: 38 HPCCHNEHDPSVALRTEEGKLRSICLAIETLVVTVRPQHLLYIAIDGVAPRAKMNQQRLR 97
Query: 118 RFRAS 122
R+ ++
Sbjct: 98 RYMSA 102
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 81/158 (51%), Gaps = 30/158 (18%)
Query: 154 SHFDSNCITPGTPFMARLSACLHYYIHDRLN---NDPG---------------------- 188
+ FDSNCI+PGT FM ++A + YIH +L ND G
Sbjct: 215 ARFDSNCISPGTVFMDAVAAAVRDYIHRKLAPKANDGGDSAEVEAGSSPSSSTTINAPCA 274
Query: 189 -WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEP 247
W G+ V+ SD+N GEGEHK++D++R Q A P + + H + G DADLI L L+ H P
Sbjct: 275 HWAGLTVVFSDSNTAGEGEHKLVDFLRTQSAFPGFNGSGCHVIAGLDADLIFLSLSLHIP 334
Query: 248 NFTIIREEFKPN--QARPCDVCGQMGHEMKECVGLDAE 283
I+R+ + + QA D G G M + V L A+
Sbjct: 335 RVVILRDNNQSSYEQALLLDTAG--GTLMTKKVSLKAK 370
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 42/179 (23%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTVY--------KTQEQLRQ 377
+ +DD++ + +GNDFLPHLPS+ E A+D L+++Y + V K + QL Q
Sbjct: 519 SKIVDDFIVLGMLLGNDFLPHLPSVYCGESAMDTLMDVYTRAVLPYGYLTGVKCEIQLAQ 578
Query: 378 EENGGGGGRGVKRSFDDV------------------DESSEEEESNDEVRLWEDGFKDRY 419
E + R++ V + ++ E S + R W D +
Sbjct: 579 LER-------LLRAYAAVEAVRFRQFAIQSGTMTPQEAATPELCSAADHRCWRDVYVRT- 630
Query: 420 YESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCR--SWKWYFPFHYAPFASDFIN 476
S D A R YV GL +V +YY +W WY+PF++AP A D +
Sbjct: 631 -TSLRDEAGTQAACR-----SYVEGLQFVWRYYSSVSLQVNWAWYYPFYHAPLALDIAD 683
>gi|16768996|gb|AAL28717.1| LD13761p [Drosophila melanogaster]
Length = 346
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDE+RL KAL PYY++L+ EE
Sbjct: 39 ESPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEKRLFKALVPYYDQLTGEE 90
>gi|355729455|gb|AES09873.1| 5'-3' exoribonuclease 1 [Mustela putorius furo]
Length = 74
Score = 97.1 bits (240), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/70 (54%), Positives = 54/70 (77%)
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
L Y+++ +++ D W+G+ + S PGEGEHKIM++IR ++A+PDHDPNT+HCL G D
Sbjct: 5 LKYFVNMKISTDKSWQGVTIYFSGHETPGEGEHKIMEFIRSEKAKPDHDPNTRHCLYGLD 64
Query: 235 ADLIMLGLAT 244
ADLIMLGL +
Sbjct: 65 ADLIMLGLTS 74
>gi|328869830|gb|EGG18205.1| hypothetical protein DFA_03692 [Dictyostelium fasciculatum]
Length = 1061
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSK---------PNPNGMEFDNL 51
MG+PAF+RWL KYP I + + + E ++ SS P N ++F+NL
Sbjct: 1 MGIPAFYRWLVDKYPKSIQYFQQQQQVEEQQEQDEVSSSSTTTTPLKIDPRCNNVKFNNL 60
Query: 52 YLDMNGIIHPCTHPEDKPA--------PKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 103
Y+DMNG+IH TH + +P+ P +D + IF+ ++ + P L+Y+A+D
Sbjct: 61 YIDMNGVIHNSTHAKGEPSVESIMASKPNTDDTIKENIFKRLNDIIVTTNPSDLVYIALD 120
Query: 104 GVAPRAKMNQQRSRRFRASKETAEKIAE 131
GV PRAK +QR RRFR++K+ E +++
Sbjct: 121 GVPPRAKATEQRRRRFRSAKDIREILSK 148
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 156 FDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRK 215
FDSN I+P T FM +++ + YI L + V+LSD VPGEGEHKIMD+IR
Sbjct: 215 FDSNSISPATEFMNKVNHWIGEYISTVLAK--SHPHLAVVLSDTTVPGEGEHKIMDFIRG 272
Query: 216 QRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMK 275
+ +T H G DADLI LGL+ H F ++R +F+ + + C +C H
Sbjct: 273 N--HKNWSESTSHIFYGMDADLIFLGLSVHLQRFFVLR-DFQ-SLSYGCSICKSEYHMSY 328
Query: 276 EC 277
EC
Sbjct: 329 EC 330
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 401 EEESNDEVRLWEDGFKD---RYYESKFDVPKDDIA-FRLMVGHEYVLGLCWVLKYYYQGC 456
EEE ND + ++ YY+ K ++ + V YV GL WVLKYY GC
Sbjct: 793 EEERNDILTSQLANLQEGELNYYKLKLQASTSEVENVKQWVCQSYVRGLSWVLKYYTVGC 852
Query: 457 RSWKWYFPFHYAPFASDF 474
WKW + FHYAP A+D
Sbjct: 853 PDWKWSYNFHYAPLAADL 870
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALD------DWVFMCFFVGNDFLPHLP 348
E +F FV L LR+Y++ L F E LD D MC +GNDFLPHLP
Sbjct: 636 ERKFEFVNLDNLRQYIKYYLT-----FGLENESQLDINNCINDITVMCMLMGNDFLPHLP 690
Query: 349 SLEIREGAVDRLVNLYKKTVYKT 371
++ I++G+++ ++ YK ++ +
Sbjct: 691 AVSIKDGSIELILGWYKDWIHNS 713
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 656 IPGGQFAPQDSPIID---------FYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALA 706
+ G+F P +P+ D FY E ++IDLNG++ +W+GV L+ F+D L
Sbjct: 909 VYSGKFLP--APLADLMKSKQLSTFYRERYRIDLNGEEVSWKGVVLVNFIDVSALESLAN 966
Query: 707 PYYEKLS 713
P E+LS
Sbjct: 967 PIAEQLS 973
>gi|407400381|gb|EKF28633.1| 5'-3' exonuclease XRNB, putative,exoribonuclease 2, putative,
partial [Trypanosoma cruzi marinkellei]
Length = 243
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 77/140 (55%), Gaps = 28/140 (20%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL++KYP ++ + P +V+G LY+D+NG+IH
Sbjct: 95 MGVPKFALWLTKKYPEMVSDVI---PADVHG-------------------LYIDLNGLIH 132
Query: 61 PCTHPEDKP--APKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H E P A + E+E + I ++ L VRP + Y+A DGVAPRAKMNQQR+RR
Sbjct: 133 PCCHSERDPSVAARPEEEKLQCICSEVEVLLATVRPHDIFYIATDGVAPRAKMNQQRARR 192
Query: 119 F--RASKET--AEKIAEVAR 134
+ RA T A + EV R
Sbjct: 193 YMNRAKIMTSGAAIVEEVVR 212
>gi|397626482|gb|EJK68154.1| hypothetical protein THAOC_10694 [Thalassiosira oceanica]
Length = 759
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 50/75 (66%), Gaps = 5/75 (6%)
Query: 406 DEVRLWEDGFKDRYYESKFDVPKDDI---AFRLMVGHEYVLGLCWVLKYYYQGCRSWKWY 462
D VRL E G+KDRYY K DD+ R + YV GLCWV++YYY GC SWKWY
Sbjct: 100 DNVRLHEPGWKDRYYTDKCKA--DDVREHGGREHLFRSYVKGLCWVMRYYYDGCPSWKWY 157
Query: 463 FPFHYAPFASDFINI 477
+PFHYAPFASD NI
Sbjct: 158 YPFHYAPFASDLRNI 172
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 33/52 (63%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+SPIIDFYP+D D NGK W V LLPF+DE RL AL P K + +E
Sbjct: 218 ESPIIDFYPKDVPCDPNGKAMPWLWVVLLPFIDEGRLLDALRPTMAKWTQKE 269
>gi|298715566|emb|CBJ28119.1| 5\'->3\' exoribonuclease, putative [Ectocarpus siliculosus]
Length = 813
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 111/251 (44%), Gaps = 59/251 (23%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
G+ F +W +++P+ + D+S+ FD++ +DMN I+H
Sbjct: 21 GINGFHKWFVQEFPTAVT-----------------DASRVE----SFDHVCIDMNQILHV 59
Query: 62 CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
+DED + IF ++ + PRK + A DG AP AK+ QRSRR +
Sbjct: 60 AMR-----KARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENS 114
Query: 122 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHD 181
+ + +++ + ++PGT FM +++ + YY
Sbjct: 115 KRNSKYRMSALH---------------------------LSPGTKFMEDVASAMEYYAFQ 147
Query: 182 RLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLG 241
P ++G+K +S ANVPGEGE K +D+++ P+ + G DADLI+ G
Sbjct: 148 ECTR-PCYQGVKFYISGANVPGEGELKCIDWLKHM-----PKPDESAVIVGGDADLILQG 201
Query: 242 LATHEPNFTII 252
LA E T I
Sbjct: 202 LALSEVKNTFI 212
>gi|261328233|emb|CBH11210.1| 5'-3' exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 1036
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 156 FDSNCITPGTPFMARLSACLHYYIHDRLN-NDPGWKGIKVILSDANVPGEGEHKIMDYIR 214
FDSNCI+PGT FMA++S + ++++++ NDP W + VI S +N PGEGEHKI+D++R
Sbjct: 226 FDSNCISPGTDFMAKVSDAVLNMLNEKMSGNDPTWTRLCVIFSGSNTPGEGEHKIIDFLR 285
Query: 215 KQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFK 257
Q + H + G DADLI L L+ H I+R+ +
Sbjct: 286 TQSSLAQFGGKANHVIVGLDADLIFLALSLHITQVFILRDTTR 328
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 25/135 (18%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL KYP+++ ++ P V+G LY+D+NGIIH
Sbjct: 1 MGVPKFASWLRNKYPAIVT---KNCPSSVHG-------------------LYIDLNGIIH 38
Query: 61 PCTHPEDKPAPK--DEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H + A E+E + I ++ L + V+P++++Y+A+DGVAPRAKMNQQR+RR
Sbjct: 39 PCCHNDSDTAIALLPEEEKLECICSELELLVQTVQPKEVMYIAVDGVAPRAKMNQQRARR 98
Query: 119 FRASKETAEKIAEVA 133
+ A+ EVA
Sbjct: 99 YMGRAAPAQT-GEVA 112
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 327 RALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
+ +DD + + +GNDFLPH PS E A+D L+ LY V
Sbjct: 509 KIIDDIIVLSILLGNDFLPHAPSAFSGESALDNLLELYVSEV 550
>gi|342181047|emb|CCC90525.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 244
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 67/121 (55%), Gaps = 24/121 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F WL KYP+ I SK P+ LY+D+NGIIH
Sbjct: 1 MGVPRFTSWLRNKYPATI--------------------SKGGPSTAH--GLYVDLNGIIH 38
Query: 61 PCTHPE--DKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
PC H + A E+E + I +D L +IV+P +LY+AIDGVAPRAKMNQQR+RR
Sbjct: 39 PCCHSDFDSTIALLPEEEKLSCICSELDLLVKIVKPTDVLYIAIDGVAPRAKMNQQRARR 98
Query: 119 F 119
+
Sbjct: 99 Y 99
>gi|336373303|gb|EGO01641.1| hypothetical protein SERLA73DRAFT_132070 [Serpula lacrymans var.
lacrymans S7.3]
Length = 75
Score = 94.0 bits (232), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 149 EKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHK 208
EK K + +DSN ITPGTPFM L+ L Y++ ++N DPGWK ++VI+SDA+VPGEGEHK
Sbjct: 9 EKNKVA-WDSNAITPGTPFMDLLALSLRYWVVQKMNTDPGWKDLQVIISDASVPGEGEHK 67
Query: 209 IMDYIRKQ 216
IMD+IR+Q
Sbjct: 68 IMDFIRRQ 75
>gi|384246301|gb|EIE19792.1| hypothetical protein COCSUDRAFT_58521 [Coccomyxa subellipsoidea
C-169]
Length = 852
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 198/504 (39%), Gaps = 97/504 (19%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGV F W +++P V G K +D+LY+DM +H
Sbjct: 1 MGVKGFNTWFRKQFPGAYV-----------GVK------------RHYDHLYIDMASYLH 37
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
E+ D D + +D+ R+V P+K + A+DG AP AK+ QR RR
Sbjct: 38 -----EELRRANDVDHFHKLLHARLDKTLRLVEPQKSVVFALDGPAPLAKLLTQRLRR-- 90
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
K+ A+K A+ +LL+ S +TPGTP MA + L YYI
Sbjct: 91 --KKEAQKEAKSG---PRLLS----------------SLGLTPGTPLMAMIQESLTYYIC 129
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
RL W+ + LS A V GEGE KI+ R R D P H + D+D++++
Sbjct: 130 RRLQTS-AWQHLHFELSGATVKGEGEVKILS--RLLRPWADVQPEDTHVVIANDSDVVLM 186
Query: 241 GLATHEPNFTII-------REEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
L T N ++ R A + G + + V A P +T G
Sbjct: 187 ALVTPARNVFVLAEPGRVARRGVASLAAGSAAAASKKGRQGRARVAAGARGLP---MTMG 243
Query: 294 SEVEFIFVRLSVL-REYLEKELAMPNLPFPYSFERA----LDDWVFMCFFVGNDFLPHLP 348
F ++ L R +L K + + ER +D + GND+LP L
Sbjct: 244 ----FTCFSVTALQRLWLHKHPFLRGATSQETAERVARLQVDLVILAILSAGNDYLPALQ 299
Query: 349 SLEIREGAV-DRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDE 407
++ ++ + + L K Q + E G + F +
Sbjct: 300 GGRLQGNSLWESYLTLKAKRDSSHQSLVTWE---GSEVQLNAACFTAL------------ 344
Query: 408 VRLWEDGFKDRYYESKFDVPKDDIAFRLMVG--HEYVLGLCWVLKYYYQG-CRSWKWYFP 464
++ W G +R+ + D DD+ H Y+ G+ W+LK Y +G C +++ +
Sbjct: 345 LKAWPRGL-NRHRSTSDD---DDVVVYKQPADPHRYLEGMEWLLKMYLEGECSDYRFTYD 400
Query: 465 FHYAPFASDFINIAEVDTNFETGT 488
YAP A I++ + + E +
Sbjct: 401 A-YAPSAYQLISMFHANGSPEASS 423
>gi|326488040|dbj|BAJ89859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 2/98 (2%)
Query: 393 DDVDESSEEEESNDEVRLWEDGFKDRYYESKFD--VPKDDIAFRLMVGHEYVLGLCWVLK 450
D D + E D+++L E G+++RYYE KF P+ R V +Y GLCWV+
Sbjct: 8 DKSDLFNSENPEEDKIKLGEPGWRERYYEDKFGARTPEQIEEIRRDVVLKYTEGLCWVMH 67
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
YYY+G SW+W++P+HYAPFASD + +++ FE G+
Sbjct: 68 YYYEGVCSWQWFYPYHYAPFASDLKGLGQLNITFELGS 105
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
SPIIDFYP DF++D+NGK+F+WQG+A LPF+DE+RL + L+ EE+
Sbjct: 138 SPIIDFYPIDFEVDMNGKRFSWQGIAKLPFIDEDRLLSEIKKVEHTLTPEEA 189
>gi|170105467|ref|XP_001883946.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164641126|gb|EDR05388.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 112
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P FFR++S + P I V+ + Q + +D + P + DNLYLD NGIIH
Sbjct: 1 MGIPKFFRYVS-EIP--IDLAVDTREQHSRVWWVAYDLERAYPMTLLSDNLYLDFNGIIH 57
Query: 61 PCTHPEDKPAP--KDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQ 113
C+ P D+ A E++ +IF +DRLF ++ +KL +MA+DGVAPRAKMNQ
Sbjct: 58 NCSRPNDEDAHFRLTEEQNNTSIFTYVDRLFGKIKLKKLFFMAVDGVAPRAKMNQ 112
>gi|147771604|emb|CAN69283.1| hypothetical protein VITISV_028678 [Vitis vinifera]
Length = 79
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%), Gaps = 3/68 (4%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVPAF+RWL+ +Y ++ VE++P E +G +I D S+PNPNGMEFDNLYLDMNGIIH
Sbjct: 1 MGVPAFYRWLADRYHLAVMDVVEEEPSE-DGAEI--DVSRPNPNGMEFDNLYLDMNGIIH 57
Query: 61 PCTHPEDK 68
PC HP+ K
Sbjct: 58 PCFHPDGK 65
>gi|124297173|gb|AAI31776.1| XRN2 protein [Homo sapiens]
Length = 55
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 46/53 (86%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYL 53
MGVPAFFRWLSRK PS+IV+CVE+KP+E NG KIP D+SKPNPN +EFD +L
Sbjct: 1 MGVPAFFRWLSRKSPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDKTHL 53
>gi|452819063|gb|EME26163.1| 5'-3' exoribonuclease, partial [Galdieria sulphuraria]
Length = 537
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 406 DEVRLWEDGFKDRYYESKFD-VPKDDIAFRLM--VGHEYVLGLCWVLKYYYQGCRSWKWY 462
D VRL E G+K+RYYE KF P+ + + R + ++Y GL WV++YYY+GC SW WY
Sbjct: 115 DVVRLGEQGWKERYYEKKFHWSPQSETSQRKREELAYKYFEGLLWVMRYYYRGCVSWTWY 174
Query: 463 FPFHYAPFASDF 474
FP+HYAPFASD
Sbjct: 175 FPYHYAPFASDL 186
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
S + FYP+DF IDL GK+F WQGVALLPFVD L A+ E ++EE E
Sbjct: 236 SELKPFYPDDFVIDLEGKRFVWQGVALLPFVDAFLLENAVRNAEESFTLEERE 288
>gi|428181808|gb|EKX50671.1| hypothetical protein GUITHDRAFT_66805 [Guillardia theta CCMP2712]
Length = 249
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 126/313 (40%), Gaps = 71/313 (22%)
Query: 55 MNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQ 114
MNG++H KD + ++ +++ +D R + P K + +A DG P AK+ Q
Sbjct: 1 MNGLLHTACRK-----AKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQ 55
Query: 115 RSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSAC 174
R RR ++SK + K++ G H ITPGT FM +
Sbjct: 56 RKRRNKSSKASKYKLS----------------------GLH-----ITPGTKFMQTMREA 88
Query: 175 LHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGAD 234
YY RL +K + +S A+V GEGE KI+++I Q +D + G D
Sbjct: 89 CEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIH-NLLQNQNDEKI--IIVGGD 145
Query: 235 ADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGS 294
ADL++ GLA R D+ G +M + +P S G
Sbjct: 146 ADLVLQGLAV----------------LRVKDLFVYAGKDMSQ--------HPSSRKAKGK 181
Query: 295 EVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIRE 354
I + + + LE+ FP + D + + GND+LP ++R
Sbjct: 182 SSPSIVLSMWEVVRSLER-------LFPGQSQAVRADLIVLMIMNGNDYLP-----KVRG 229
Query: 355 GAVDRLVNLYKKT 367
G+ + YKK
Sbjct: 230 GSFESFFRAYKKV 242
>gi|321444979|gb|EFX60557.1| hypothetical protein DAPPUDRAFT_19557 [Daphnia pulex]
Length = 74
Score = 84.7 bits (208), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 47 EFDNLYLDMNGIIHPCTHPEDKPAPKD-EDEMMVAIFECIDRLFRIVRPRKLLYMAIDGV 105
E+DNLY+D+N I+H C D E +M +FE ID++F IVRPRKLLY+A+DGV
Sbjct: 1 EYDNLYIDLNEIVHNCVRAARFHNADDRERRIMEILFEKIDQIFSIVRPRKLLYVALDGV 60
Query: 106 APRAKMNQQRSRRF 119
APRAK QQR RRF
Sbjct: 61 APRAKRTQQRIRRF 74
>gi|238609845|ref|XP_002397575.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
gi|215472342|gb|EEB98505.1| hypothetical protein MPER_01971 [Moniliophthora perniciosa FA553]
Length = 150
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 418 RYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
RYY+ KF V D FR + YV G+ WVL YYYQG SW+WY+P+H+APFA+DF +
Sbjct: 1 RYYQQKFGVEYTDKEFRKKLTQSYVEGMSWVLCYYYQGTPSWQWYYPYHFAPFAADFEEV 60
Query: 478 AEVDTNFETG 487
E++ +FE G
Sbjct: 61 DEMNIHFEIG 70
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 35/38 (92%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
++SPIIDFYP F++D+NGKK AWQG+ALLPF+DE+RL
Sbjct: 102 EESPIIDFYPSTFQVDMNGKKMAWQGIALLPFIDEKRL 139
>gi|328772275|gb|EGF82313.1| hypothetical protein BATDEDRAFT_34347 [Batrachochytrium
dendrobatidis JAM81]
Length = 870
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 138/355 (38%), Gaps = 98/355 (27%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P W+ + P + KP +E D++++D+N I+H
Sbjct: 1 MGLPKLRAWMRQTMPKCFAVLEKKKP-------------------LEIDHIFVDINFILH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFR--IVRPRKLLYMAIDGVAPRAKMNQQRSRR 118
H + +M+ + + + ++ + +R + L++++DG P AKM QRSRR
Sbjct: 42 LKAH-----RSASSNSLMIQVVKKLRQIIQHGAIRVTRQLFLSVDGPPPIAKMLLQRSRR 96
Query: 119 FRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
+ S E +K + S FD+ ITPG FM + L +Y
Sbjct: 97 IK-SGENRKKCSY----------------------SRFDTRQITPGCMFMDDVERYLEHY 133
Query: 179 IHDRLNNDP-GWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADL 237
L P VI+S +VPGEGE KI++ I K + + N + + G+D D+
Sbjct: 134 ACKHLAVSPKNAPQPSVIISGPSVPGEGELKIIETIVKMQQDAEIRANERFAILGSDTDI 193
Query: 238 IMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVE 297
I+ +A + +C+ +D+ N EV
Sbjct: 194 ILQTIAANV-----------------------------DCLVIDSSTN---------EV- 214
Query: 298 FIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEI 352
SV Y E +P R D+ + F GND+LP LP + I
Sbjct: 215 -----FSVESFYKSLESMVPG----KDTRRVALDFAALVLFSGNDYLPKLPKVPI 260
>gi|237831033|ref|XP_002364814.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|211962478|gb|EEA97673.1| XRN 5'-3' exonuclease N-terminus domain-containing protein
[Toxoplasma gondii ME49]
gi|221507695|gb|EEE33299.1| hypothetical protein TGVEG_101580 [Toxoplasma gondii VEG]
Length = 2089
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 62/225 (27%)
Query: 46 MEFDNLYLDMNGIIHPCTH---PEDKPAPKDEDEMMVAIFEC--IDRLFRIVRPRKLLYM 100
+ D L+LD N IIH C+H P P P + ++ C + RL +VRPRKLL +
Sbjct: 653 LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVL 712
Query: 101 AIDGVAPRAKMN------------------------------QQRSRR------------ 118
+DGV P AK+N +Q RR
Sbjct: 713 TLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDAT 772
Query: 119 ------FRASKETAEKIAEVARIREKLLAD--GCILPPEKEKGSHFDSNCITPGTPFMAR 170
RA V ++ + +D + PP + D+NCI+PGT FM
Sbjct: 773 LNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPP------YLDTNCISPGTTFMTL 826
Query: 171 LSACLHYYIHDRLNNDPGWKGIK-VILSDANVPGEGEHKIMDYIR 214
L +I +L P W+ ++ V L+ +VPGEGEHK++ +R
Sbjct: 827 CEQTLKKFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLR 871
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
ER +DD+VF+ FFVGNDFLP LP L+I +G + LV Y +
Sbjct: 1299 ERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRSYTAAL 1341
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
FR + +YV GL ++L+YY+ W W+FP +AP SD +
Sbjct: 1490 FRAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARL 1534
>gi|221487913|gb|EEE26145.1| XRN 5'-3' exonuclease N-terminus domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 2089
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 62/225 (27%)
Query: 46 MEFDNLYLDMNGIIHPCTH---PEDKPAPKDEDEMMVAIFEC--IDRLFRIVRPRKLLYM 100
+ D L+LD N IIH C+H P P P + ++ C + RL +VRPRKLL +
Sbjct: 652 LPIDALFLDFNAIIHLCSHGHLPSTLPPPLMHCQPLLLQRVCAYLHRLVSLVRPRKLLVL 711
Query: 101 AIDGVAPRAKMN------------------------------QQRSRR------------ 118
+DGV P AK+N +Q RR
Sbjct: 712 TLDGVPPLAKVNQQRSRRFRQSRDDRLAVRLEDEEDEDEGDGRQGCRRAAQTPTLETDAT 771
Query: 119 ------FRASKETAEKIAEVARIREKLLAD--GCILPPEKEKGSHFDSNCITPGTPFMAR 170
RA V ++ + +D + PP + D+NCI+PGT FM
Sbjct: 772 LNAQETLRAEGREEGDGEGVRKLCGEASSDLFAAVAPP------YLDTNCISPGTTFMTL 825
Query: 171 LSACLHYYIHDRLNNDPGWKGIK-VILSDANVPGEGEHKIMDYIR 214
L +I +L P W+ ++ V L+ +VPGEGEHK++ +R
Sbjct: 826 CEQTLKKFIVHKLRTSPLWRNLQCVCLNTHSVPGEGEHKLLHLLR 870
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 326 ERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
ER +DD+VF+ FFVGNDFLP LP L+I +G + LV Y +
Sbjct: 1298 ERLIDDFVFLSFFVGNDFLPGLPHLDIFQGGLATLVRSYTAAL 1340
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
FR + +YV GL ++L+YY+ W W+FP +AP SD +
Sbjct: 1489 FRAQLALDYVTGLFFLLRYYHTSKPCWSWFFPHEFAPLCSDLARL 1533
>gi|145507550|ref|XP_001439730.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406925|emb|CAK72333.1| unnamed protein product [Paramecium tetraurelia]
Length = 394
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 397 ESSEEEESNDEVRLWED-GFKDRYYESKFDV-PKDDIAFRLMVGHEYVLGLCWVLKYYYQ 454
+ ++ +S+ E++ W+ +K RYY+ KF + P F+ + Y+ L W LKYYYQ
Sbjct: 77 DQAQSAKSSQELKKWKSVSYKQRYYQEKFGIKPTQFSEFQHRIKISYLEALAWTLKYYYQ 136
Query: 455 GCRSWKWYFPFHYAPFASDFINIAEVDTNFETGT 488
GC W W++P+HYAPFA D N+ + F T
Sbjct: 137 GCVDWGWFYPYHYAPFAQDLTNLDQCMFEFSLNT 170
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKA 704
S I DFYP DF +DL GKKFAW G +LPFVD +RL A
Sbjct: 203 SSIADFYPTDFVVDLKGKKFAWLGEVVLPFVDADRLISA 241
>gi|412985578|emb|CCO19024.1| predicted protein [Bathycoccus prasinos]
Length = 1002
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 107
FD++Y+D+N ++H H K E +F + + R RPR + A+DG AP
Sbjct: 71 FDHVYVDVNNVLHVAAH-----HTKTESAFYKKLFGLLTGIIRRTRPRHSITFALDGPAP 125
Query: 108 RAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPF 167
AK QR RR R S E ++ KL ITPG+
Sbjct: 126 MAKTITQRRRRVRLSSGEREPLSTDLSRMMKL--------------------GITPGSRL 165
Query: 168 MARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQ 227
++ + YYI +++ + I LS VPGEGE K++ ++ ++ P+ N
Sbjct: 166 ALKVDRAIEYYIASKVHREDFGPDILYELSGTTVPGEGEIKLVRAMQLRQENPNFQ-NHT 224
Query: 228 HCLCGADADLIMLGLATH 245
HC+ D+D I+L L +
Sbjct: 225 HCVVSEDSDAILLALTVN 242
>gi|343959368|dbj|BAK63541.1| 5'-3' exoribonuclease 2 [Pan troglodytes]
Length = 370
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 42/53 (79%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEES 717
DS IIDFYPEDF IDLNGKK+AWQGVALLPFVDE RL AL Y L+ EE+
Sbjct: 42 DSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRAALEEVYPDLTPEET 94
>gi|194385576|dbj|BAG65165.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 26/128 (20%)
Query: 239 MLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFGSEVEF 298
MLGL +HE +F+++REE + + VC PE E F
Sbjct: 1 MLGLTSHEAHFSLLREEVRFGGKKTQRVCA-----------------PE-------ETTF 36
Query: 299 IFVRLSVLREYLEKELAM--PNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGA 356
+ LS++REY++ E ++ + F Y ER +DDW+ M F VGNDF+PHLP L I A
Sbjct: 37 HLLHLSLMREYIDYEFSVLKEKITFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDA 96
Query: 357 VDRLVNLY 364
+ L Y
Sbjct: 97 LPLLYGTY 104
>gi|310831027|ref|YP_003969670.1| putative 5'-3' exoribonuclease [Cafeteria roenbergensis virus
BV-PW1]
gi|309386211|gb|ADO67071.1| putative 5'-3' exoribonuclease [Cafeteria roenbergensis virus
BV-PW1]
Length = 704
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 160/725 (22%), Positives = 280/725 (38%), Gaps = 185/725 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ FF LS + + +K K P+ K N L +D N I+H
Sbjct: 1 MGIERFFSTLSN------ISSIWEKI------KYPYTKKKYNI-------LLIDFNSIVH 41
Query: 61 PCTH-----PEDKPAPKDEDEMMVAIFECIDRL-FRIVRPRKL--LYMAIDGVAPRAKMN 112
+ + E E++V I + L + ++ +L +Y+AIDGV K+
Sbjct: 42 FTSTRVLSVNKIHSIKFIEKEILVNIKNYLKHLLYEVILTNELDTIYIAIDGVPSFGKLR 101
Query: 113 QQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSH-FDSNCITPGTPFMARL 171
+Q+ RR+ G +L K +H ++ + ITPGT FM L
Sbjct: 102 EQQKRRYM----------------------GSLL-----KSTHKWNKSNITPGTKFMKHL 134
Query: 172 SACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLC 231
+ L + +L + K I I SD+N PGEGE KI++Y+R + + P +
Sbjct: 135 NNYLKQ-VLKKLQTEFSIKNI--IFSDSNEPGEGETKIVNYLRTLKLSKSNIP---ILIF 188
Query: 232 GADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVIT 291
D+D+++L L +I+ EF + R Q +K LD + N ++T
Sbjct: 189 SPDSDMVLLNL--------LIKPEFVVSLLR----FNQQESNLK---VLDNKTNVYEIMT 233
Query: 292 FGSEVEFI--FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPS 349
+ ++ ++ ++ E+++ + VF CF GNDFLP + S
Sbjct: 234 MKNFRNYLVNYIETKTYKKLEERKIIRDII------------LVFNCF--GNDFLPKIIS 279
Query: 350 LEIREGAVDRLVNLYKKTVYKTQEQLRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVR 409
+ ++ + ++++LY ++ K L E+G +K F ++ + + +R
Sbjct: 280 INLKHDFL-QVIDLYAISLIKNNNYLI--ESGQINWNNLKVIFKLLENKEYDNLKLEHLR 336
Query: 410 LWEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAP 469
F + Y + +Y ++K +
Sbjct: 337 FKYHNFDNVLYNN-----------------------------FYINTNTFKDH------- 360
Query: 470 FASDFINIAEVDTNFETGTQPVNNN--RILKFILYHFDNKMFFWNKSLINIAEVDTNFET 527
+A + F +P NNN L F +F N + F+ +LI+I E DTNF
Sbjct: 361 -------LANIKYKFLKLKKPKNNNFTNFLDFYNNNFINFLDFYKNNLIDIKE-DTNF-- 410
Query: 528 GTQPVNNRILKFYVSDNIHLLILLVLRSWLVSLHVFTITYMIVSTMTLAGKASKLFSRML 587
++ N L L+ L L+ Y+ + K KL
Sbjct: 411 -------------LNFNYLALRLINLNELYTKLYDTKTNYLNIK----INKTHKLIKIYK 453
Query: 588 TYPGFLTDSGDVKLERVQ--LIMQDLGMMEDEIF-KKRQQTETMFKMRNKMKKRRERQMK 644
+ LTDS ++ + + + DL + + ++F KK + FK+RN K R Q+K
Sbjct: 454 SLYYHLTDSINLVEDLIYYFYLFDDLPLFKSDLFIKKLAPNKLSFKLRNYDSKSRYHQIK 513
Query: 645 M------AAQSTKAPSFIPG--GQFAPQDSPIIDFYPED-----------FKIDLNGKKF 685
+ + K +F+ QF P I D +P FK + N KF
Sbjct: 514 INDLDLEEIEIYKMTNFLDEYYNQFKPY---IFDTFPSKNNIYTIYKKNYFKSNNNYTKF 570
Query: 686 AWQGV 690
++G+
Sbjct: 571 YFEGI 575
>gi|222636726|gb|EEE66858.1| hypothetical protein OsJ_23653 [Oryza sativa Japonica Group]
Length = 628
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGV AF+RWL+ +YP + VE++P E+ G +P D +PNPNG++FDNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 60 HPCTHPE 66
HPC HPE
Sbjct: 61 HPCFHPE 67
>gi|302837081|ref|XP_002950100.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
gi|300264573|gb|EFJ48768.1| hypothetical protein VOLCADRAFT_104606 [Volvox carteri f.
nagariensis]
Length = 1148
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 59/248 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+P F W S KY +P D + D+LY+D+N ++H
Sbjct: 1 MGIPGFNVWFSEKYSKAY---------------LPLDK-------VRVDHLYIDLNSVLH 38
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
++ + + + + + +P K + +A+DG AP AK+ QR RR +
Sbjct: 39 TVMRNA-----RNHGHFHKLLHKRLSAILDVTQPNKSVMIAVDGPAPLAKLLTQRDRRKK 93
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
+ E G ITPGT FM L+ L Y+
Sbjct: 94 KGRSVDE-------------------------GETLTGVAITPGTTFMLDLTHSLTYFCC 128
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDH--DPNTQHCLCGADADLI 238
+++ ++ + LSD+NV GEGE K++ + A+P H +P H + G DADLI
Sbjct: 129 TKMSGK-RYRHLLFELSDSNVMGEGEVKVLGRL----ARPWHPGNPKDTHVIFGDDADLI 183
Query: 239 MLGLATHE 246
++ L +++
Sbjct: 184 LMALTSYK 191
>gi|115471315|ref|NP_001059256.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|113610792|dbj|BAF21170.1| Os07g0238700 [Oryza sativa Japonica Group]
gi|215695346|dbj|BAG90537.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715337|dbj|BAG95088.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 182
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGV AF+RWL+ +YP + VE++P E+ G +P D +PNPNG++FDNLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLKFDNLYLDMNGII 60
Query: 60 HPCTHPE 66
HPC HPE
Sbjct: 61 HPCFHPE 67
>gi|284066773|gb|ADB77658.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066775|gb|ADB77659.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066777|gb|ADB77660.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAPQD-----SPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+APQ SP+++ E + G A G +
Sbjct: 87 CYNRPAYIPHGQYAPQAIGSTPSPVLNARQESINMRRMGMHTATDGSVV 135
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
+KR FD S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 IKRKFD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|302814256|ref|XP_002988812.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
gi|300143383|gb|EFJ10074.1| hypothetical protein SELMODRAFT_427492 [Selaginella moellendorffii]
Length = 298
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 145/376 (38%), Gaps = 96/376 (25%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FF WL K+P CV D + +D+ F Y +
Sbjct: 1 MGVPGFFAWLVSKHP----RCVRDAIDGAKNNILRYDT---------FATFYQE------ 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
+ + +L +V P KL+++A+DG P K+ + ++
Sbjct: 42 --------------------FLDSLRKLVAMVAPTKLVFLALDGRPPTPKLFSKLFKKPC 81
Query: 121 ASKETAEKIAEVARIREKLLADGCI--LPPEKEKGSHFDSNCITPGTPFMARLSACLHYY 178
A + + E G L P K + GTPFM RL + L +
Sbjct: 82 RYNRDASLSSLSSSEDELDSTKGQTGDLIPRNRKAKM---AMVRHGTPFMNRLESELRRF 138
Query: 179 IHDRLNNDPG---------WKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHC 229
+ + + ++ I+S + GEGE KI ++IR A P + + HC
Sbjct: 139 VASMMLSSSDDHRRRRSMTSSRLQWIVSTSEEDGEGELKIFNHIR---ALP-FNAHDFHC 194
Query: 230 LCGADADLIMLGLAT-HEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPES 288
+ G DADLIML LA+ I+R+ P D G + + + ++
Sbjct: 195 VVGRDADLIMLALASPLSRKINIVRQT-------PKD-----GVMIYKLISIE------- 235
Query: 289 VITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLP 348
+++R++ E+ M P + D VF+CF +GNDFLP L
Sbjct: 236 ---------------TLVRDF---EVQMEE-PCSVRLRSTMRDLVFLCFLLGNDFLPGLE 276
Query: 349 SLEIREGAVDRLVNLY 364
+L IR +D+L Y
Sbjct: 277 ALTIRNNGIDKLQQTY 292
>gi|284066765|gb|ADB77654.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066767|gb|ADB77655.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
gi|284066769|gb|ADB77656.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. B JKM-2010]
Length = 221
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESGANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+AP SP+++ E + G A G +
Sbjct: 87 CYNRPAYIPHGQYAPVAIGSTPSPVLNARQESINMRRMGMHTATDGSVV 135
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
+KR FD S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 IKRKFD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066759|gb|ADB77651.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 2 JKM-2010]
Length = 221
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++M+ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKMESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|296085877|emb|CBI31201.3| unnamed protein product [Vitis vinifera]
Length = 85
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 300 FVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGND-FLPHLPSLEIREGAVD 358
F+ + LREYLE E+ +PNLPF FE +DD++FMCFFVGND FLP + +L I EGA++
Sbjct: 8 FLNIWTLREYLEYEMRIPNLPFGIDFEHLVDDFIFMCFFVGNDFFLPRMLALVICEGAIN 67
Query: 359 RLVNLYKKTV 368
L+ +YKK +
Sbjct: 68 LLMAVYKKEL 77
>gi|284066723|gb|ADB77633.1| 5'-3' exoribonuclease II [Pogonognathellus flavescens]
Length = 221
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K K+R++ A +
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEERFKARMKANKKRKKAESQANSNC 87
Query: 651 -KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ+AP SP+ + E + +G A G
Sbjct: 88 YNRPAYIPHGQYAPVAIGSTPSPVQNAREESINMRRSGMHTATDG 132
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKHD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLV LYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVTLYKKTVYKT 26
>gi|284066793|gb|ADB77668.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 221
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESGANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+AP SP+ + E + G A G +
Sbjct: 87 CYNRPAYIPHGQYAPVAIGSTPSPVHNARQESINMRRAGMHTATDGSVV 135
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|256077064|ref|XP_002574828.1| 5'-3' exoribonuclease [Schistosoma mansoni]
Length = 1637
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 31/134 (23%)
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
D +I GL THE N I+RE +A+ C D +P
Sbjct: 61 DPCVISPGLTTHEINICILRENVV--KAQNCSA--------------DNKP--------- 95
Query: 294 SEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
F LSVLREY++ E LPFPY ER +DDWVFM F +GNDF+PH+P+L
Sbjct: 96 ----FCITYLSVLREYIDLEFTELKKTLPFPYDLERLIDDWVFMAFLLGNDFIPHIPNLH 151
Query: 352 IREGAVDRLVNLYK 365
I ++ + + Y+
Sbjct: 152 IHAESLLTVWDTYQ 165
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 14/77 (18%)
Query: 88 LFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILP 147
L +PRK ++A+DGVAPRAKM QQR+RRF+++ E RI ++ L D
Sbjct: 6 LVHTQKPRKTFFLAVDGVAPRAKMTQQRARRFQSALE--------GRIAKENLKDNS--- 54
Query: 148 PEKEKGSHFDSNCITPG 164
PE FD I+PG
Sbjct: 55 PETYS---FDPCVISPG 68
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 20/93 (21%)
Query: 419 YYESKFDVPKDDIAFRL-------MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
YY SK + D+++ L + +Y+ L W+L YY+ W +++ +HYAPF
Sbjct: 376 YYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVADWDFFYAYHYAPFV 435
Query: 472 SDFI-------------NIAEVDTNFETGTQPV 491
D I I TNF+T +QPV
Sbjct: 436 HDLILYTKKFENCQNFNGIKLSWTNFQTNSQPV 468
>gi|350646476|emb|CCD58875.1| 5'-3' exoribonuclease, putative [Schistosoma mansoni]
Length = 1638
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 67/139 (48%), Gaps = 31/139 (22%)
Query: 234 DADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEPNPESVITFG 293
D +I GL THE N I+RE +A+ C D +P
Sbjct: 61 DPCVISPGLTTHEINICILRENVV--KAQNCSA--------------DNKP--------- 95
Query: 294 SEVEFIFVRLSVLREYLEKELA--MPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLE 351
F LSVLREY++ E LPFPY ER +DDWVFM F +GNDF+PH+P+L
Sbjct: 96 ----FCITYLSVLREYIDLEFTELKKTLPFPYDLERLIDDWVFMAFLLGNDFIPHIPNLH 151
Query: 352 IREGAVDRLVNLYKKTVYK 370
I ++ + + Y+ + K
Sbjct: 152 IHAESLLTVWDTYQVVLPK 170
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 14/77 (18%)
Query: 88 LFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILP 147
L +PRK ++A+DGVAPRAKM QQR+RRF+++ E RI ++ L D
Sbjct: 6 LVHTQKPRKTFFLAVDGVAPRAKMTQQRARRFQSALE--------GRIAKENLKDNS--- 54
Query: 148 PEKEKGSHFDSNCITPG 164
PE FD I+PG
Sbjct: 55 PETYS---FDPCVISPG 68
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 25/112 (22%)
Query: 419 YYESKFDVPKDDIAFRL-------MVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFA 471
YY SK + D+++ L + +Y+ L W+L YY+ W +++ +HYAPF
Sbjct: 376 YYSSKLGIQLDEMSGDLGENSTLMSLIQDYIRMLQWILNYYFLNVADWDFFYAYHYAPFV 435
Query: 472 SDFI-------------NIAEVDTNFETGTQPVNNNRILKFILYHFDNKMFF 510
D I I TNF+T +QPV L F++ D ++
Sbjct: 436 HDLILYTKKFENCQNFNGIKLSWTNFQTNSQPV-----LPFLIPFLDQQLLI 482
>gi|284066801|gb|ADB77672.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESGANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066797|gb|ADB77670.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 221
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESGANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066789|gb|ADB77666.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 7 JKM-2010]
Length = 224
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+AP SP+ + E + G A G +
Sbjct: 87 CYNRPAYIPHGQYAPVAIGSTPSPVHNARQESINMRRAGMHTATDGSVV 135
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 179 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 224
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|70929849|ref|XP_736923.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56511875|emb|CAH76238.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 279
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 36/171 (21%)
Query: 309 YLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLYKKTV 368
Y+ K N+ F S R +DD VF+ F VGNDFLPH+P+++I EG+++ ++N Y +
Sbjct: 127 YINKLKKEKNIIF--SINRVIDDIVFLSFLVGNDFLPHIPNIDINEGSMNEILNSYIFYI 184
Query: 369 YKTQEQ------------------LRQEENGGGGGRGVKRSFDDVDESSEEEESNDEVRL 410
YK L +E RGV +++ E ++E++
Sbjct: 185 YKYSNYITYKDKVHIERLKIILKILSGQEFQYFKKRGVN---ENIPEFTDEQK------- 234
Query: 411 WEDGFKDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKW 461
+K YY KF V D + +V +Y+ GL W L YY+ GC SW W
Sbjct: 235 ----YKSYYYFHKFGVS-DPKQIQQIVK-KYIEGLFWNLHYYHFGCASWHW 279
>gi|125557787|gb|EAZ03323.1| hypothetical protein OsI_25466 [Oryza sativa Indica Group]
Length = 205
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVN-GQKIPFDSSKPNPNGMEFDNLYLDMNGII 59
MGV AF+RWL+ +YP + VE++P E+ G +P D +PNPNG++F NLYLDMNGII
Sbjct: 1 MGVLAFYRWLADRYPQTVSDAVEEEPVELEPGSFVPVDLRRPNPNGLKFYNLYLDMNGII 60
Query: 60 HPCTHPE 66
HPC HPE
Sbjct: 61 HPCFHPE 67
>gi|284066779|gb|ADB77661.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
gi|284066781|gb|ADB77662.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 4 JKM-2010]
Length = 220
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+AP SP+ + E + G A G +
Sbjct: 87 CYSRPAYIPHGQYAPVAIGSTPSPVQNARQESINMRRAGMHTATDGSVV 135
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR +D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 175 VKRKYD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRREV 220
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066807|gb|ADB77675.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066809|gb|ADB77676.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066811|gb|ADB77677.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
Length = 221
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S +EEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDDEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066791|gb|ADB77667.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 6 JKM-2010]
Length = 161
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/106 (44%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKANKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ+AP SP+ + E + G A G
Sbjct: 87 CYNRPAYIPHGQYAPVAIGSTPSPVQNARQESINMRRMGMHTATDG 132
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066799|gb|ADB77671.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 9 JKM-2010]
Length = 211
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 18 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESXANSN 76
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 77 CYNRPAYIPHGQYAP 91
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 166 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 211
>gi|284066795|gb|ADB77669.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 8 JKM-2010]
Length = 221
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066803|gb|ADB77673.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
gi|284066805|gb|ADB77674.1| 5'-3' exoribonuclease II [Pogonognathellus sp. nov. A JKM-2010]
Length = 221
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S +EEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKHD----SDDEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066783|gb|ADB77663.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066785|gb|ADB77664.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 5 JKM-2010]
gi|284066787|gb|ADB77665.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 6 JKM-2010]
Length = 224
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKANKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ+AP
Sbjct: 87 CYNRPAYIPHGQYAP 101
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S +EEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 179 VKRKHD----SDDEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 224
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066721|gb|ADB77632.1| 5'-3' exoribonuclease II [Pogonognathellus bidentatus]
Length = 222
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEERFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQGVAL 692
P++IP GQ+AP SP+ + E + G A G +
Sbjct: 87 CYNRPAYIPHGQYAPVAIGSTPSPVQNARQESINMRRQGMHTAVDGSVV 135
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 172 GQSSQVKRKHD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 222
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|154317860|ref|XP_001558249.1| hypothetical protein BC1G_02913 [Botryotinia fuckeliana B05.10]
Length = 945
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 394 DVDESSEEEESNDEVRLWEDGF---KDRYYESKFDVPKDDIAFRLMVGHEYVLGLCWVLK 450
+V + S+E+ + R +E+ F KD+YYE KF+ + + + YV GL WVL
Sbjct: 38 EVLDVSKEQAQAEMERKYEEKFQEWKDKYYEGKFEWDRKNEIELTKLCENYVQGLQWVLY 97
Query: 451 YYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETGTQP 490
YYY+G SW WY+ +HY+P SD I + D NF+ G QP
Sbjct: 98 YYYRGVVSWPWYYQYHYSPMISDVIKGLKADVNFKLG-QP 136
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 666 SPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
SPIIDFYP DF++D+NGKK W+ V +PF+DE+RL A+A LS E
Sbjct: 168 SPIIDFYPRDFELDMNGKKMEWEAVVKIPFIDEKRLLDAMATKNNLLSDAE 218
>gi|284066747|gb|ADB77645.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066749|gb|ADB77646.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066751|gb|ADB77647.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
gi|284066757|gb|ADB77650.1| 5'-3' exoribonuclease II [Pogonognathellus nigritus]
Length = 221
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSNPSPVRNAREENINMRRAGMHTATDG 132
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR FD S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKFD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066731|gb|ADB77637.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESQANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSTPSPVQNAREENINMRRAGMHTATDG 132
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKLD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066745|gb|ADB77644.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVASGSTPSPVRNAREENINMRRAGMHTATDG 132
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR FD S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKFD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066733|gb|ADB77638.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSTPSPVRNAREENINMRRAGMHTATDG 132
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKLD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066737|gb|ADB77640.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066739|gb|ADB77641.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066741|gb|ADB77642.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
gi|284066743|gb|ADB77643.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 1 JKM-2010]
Length = 221
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSTPSPVRNAREENINMRRAGMHTATDG 132
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR FD S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKFD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066761|gb|ADB77652.1| 5'-3' exoribonuclease II [Pogonognathellus sp. 3 JKM-2010]
Length = 221
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ AP
Sbjct: 87 CYNRPAYIPHGQLAP 101
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 388 VKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
VKR +D S EEEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 176 VKRKYD----SDEEEEPNDEVRLWEDGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|413932822|gb|AFW67373.1| hypothetical protein ZEAMMB73_239358 [Zea mays]
Length = 541
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 439 HEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINIAEVDTNFETG 487
+YV GLCWV++YYYQG SW+W++P+HYAPFASD +AE++ F G
Sbjct: 19 QKYVEGLCWVMRYYYQGVCSWQWFYPYHYAPFASDLKGLAELEITFFLG 67
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 646 AAQSTKAPSFIPGGQFAPQDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERL 701
AA S P + G + DSP+ FYP+DF+ID+NGK+FAWQGVA LPF+DE RL
Sbjct: 82 AASSNALPKYY-GDLMSDPDSPLKSFYPKDFEIDMNGKRFAWQGVAKLPFIDERRL 136
>gi|284066719|gb|ADB77631.1| 5'-3' exoribonuclease II [Tomocerus minor]
Length = 223
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNK-MKKRRERQMKMAAQS 649
G+LTDSG L RVQLIM DLG +EDEIFK RQQ E FK R K KKR++ +M+ +
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEIRFKARMKAQKKRKKSEMQADSNC 87
Query: 650 TKAPSFIPGGQFAP 663
P+++ GQFAP
Sbjct: 88 YNRPAYLTHGQFAP 101
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 389 KRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
KR FD S +EEE NDEVRLWEDGFKDRYYESKFDV D+ FR V
Sbjct: 179 KRKFD----SDDEEEPNDEVRLWEDGFKDRYYESKFDVQPDNYEFRQEV 223
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|303289645|ref|XP_003064110.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454426|gb|EEH51732.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 335
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 48 FDNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAP 107
+D++Y+D+N ++H H K E+ +F +DR R+ RP+ + +A+DG AP
Sbjct: 133 YDHVYVDVNNVLHVAAHHT-----KTEEAFFKKLFALLDRTMRLTRPQYTVTLALDGPAP 187
Query: 108 RAKMNQQRSRRFRASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPF 167
AK QR RR R S + EK+ P E +TPG+
Sbjct: 188 IAKTITQRRRRIRLS--SGEKV------------------PLSEDAPRLLKIGLTPGSTL 227
Query: 168 MARLSACLHYYIHDRL---NNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDP 224
R+ L YY RL N+ P +G+ +S VPGEGE K++ + K R +
Sbjct: 228 ALRIDRALEYYAATRLLSRNHLP--RGVLFEISGTRVPGEGEVKVLRSM-KTREKNARFK 284
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFK 257
H + D+D ++L L N ++ + +
Sbjct: 285 GHSHLIVSEDSDALLLALTAEPANVFVLSSKVR 317
>gi|284066735|gb|ADB77639.1| 5'-3' exoribonuclease II [Pogonognathellus elongatus]
Length = 221
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LTDSG L RVQLIM DLG +EDEIF+ RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTDSGVPDLTRVQLIMSDLGEVEDEIFRNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP 663
P++IP GQ AP
Sbjct: 87 CYSRPAYIPHGQLAP 101
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKLD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066729|gb|ADB77636.1| 5'-3' exoribonuclease II [Pogonognathellus longicornis]
Length = 221
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTNSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSTPSPVRNAREENISMRRAGMHTATXG 132
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKHD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|284066727|gb|ADB77635.1| 5'-3' exoribonuclease II [Pogonognathellus longicornis]
Length = 221
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 591 GFLTDSGDVKLERVQLIMQDLGMMEDEIFKKRQQTETMFKMRNKMKKRRERQMKMAAQST 650
G+LT+SG L RVQLIM DLG +EDEIFK RQQ E FK R K +K+R ++++ A S
Sbjct: 28 GWLTNSGVPDLTRVQLIMSDLGEVEDEIFKNRQQNEVRFKARMKAQKKR-KKLESEANSN 86
Query: 651 --KAPSFIPGGQFAP-----QDSPIIDFYPEDFKIDLNGKKFAWQG 689
P++IP GQ AP SP+ + E+ + G A G
Sbjct: 87 CYSRPAYIPHGQLAPVAIGSTPSPVRNAREENISMRRAGMHTATDG 132
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 383 GGGRGVKRSFDDVDESSEEEESNDEVRLWEDGFKDRYYESKFDVPKDDIAFRLMV 437
G VKR D S +EEE NDEVRLWE GFKDRYYESKFDV D+ FR V
Sbjct: 171 GQSPQVKRKHD----SDDEEEPNDEVRLWEAGFKDRYYESKFDVQADNYEFRQEV 221
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/26 (92%), Positives = 25/26 (96%)
Query: 346 HLPSLEIREGAVDRLVNLYKKTVYKT 371
HLPSLEIRE A+DRLVNLYKKTVYKT
Sbjct: 1 HLPSLEIRENAIDRLVNLYKKTVYKT 26
>gi|330843277|ref|XP_003293585.1| hypothetical protein DICPUDRAFT_158467 [Dictyostelium purpureum]
gi|325076072|gb|EGC29891.1| hypothetical protein DICPUDRAFT_158467 [Dictyostelium purpureum]
Length = 727
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 25/203 (12%)
Query: 49 DNLYLDMNGIIHPCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPR 108
D++ D+N +++ P ++ I E +D+ R PR+ + ++DG AP
Sbjct: 28 DHICFDLNSVLYSLKKPTVTN--------ILNIEEKLDQEIRKFNPRQSAFFSLDGPAPV 79
Query: 109 AKMNQQRSRRFRASKETAEKIAEVARIREKLLADGC------ILPPEKEKGSHFDSNCIT 162
+KM Q+ R + + E E + A I++K ++D + +G+ + SN I+
Sbjct: 80 SKMPLQKENRIKRNSEVIENLKYFA-IQKKEISDDKDKHLLEFVDDNLIEGTEYRSN-IS 137
Query: 163 PGTPFMARLSACLHYYI-HDRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPD 221
PGT FM + + L+YY+ RL N P K +S A+ GEGE KI +Y+ +
Sbjct: 138 PGTRFMGCIKSFLYYYLTKQRLGNFPQ----KAYISGADRAGEGEWKIFEYLNNSK---- 189
Query: 222 HDPNTQHCLCGADADLIMLGLAT 244
++ N + + +D+DLI+ L +
Sbjct: 190 YNVNDKVVIFSSDSDLIISALLS 212
>gi|123976904|ref|XP_001314674.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897268|gb|EAY02394.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 212
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 62/257 (24%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MG+ F L +YP ++ E IP+ P N + D L + GI H
Sbjct: 1 MGIYTFKGQLVNRYPLILKSLSE----------IPY----PKYNCLFIDASLLIVKGI-H 45
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR 120
E + A + + + +V+P L+++A DG AK +RR+
Sbjct: 46 AGVQTELRTANARQ---------LFNNVVHLVQPTDLIFIAFDGPFSNAKQYTVLNRRYV 96
Query: 121 ASKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIH 180
E ++ F+ + L +I
Sbjct: 97 YKSMPIETYNQI-----------------------FEDD---------------LKSWIE 118
Query: 181 DRLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIML 240
+ +N D W+ +VI S + VPGE E KI D++R++ +P+ DPN +HC+ D+DLI++
Sbjct: 119 ELINFDEYWQKPRVIFSGSKVPGEAETKIFDFLRQEIHKPEWDPNKRHCIVTNDSDLILM 178
Query: 241 GLATHEPNFTIIREEFK 257
L +H PN I + ++
Sbjct: 179 SLRSHIPNIDIYNDIYQ 195
>gi|330791402|ref|XP_003283782.1| hypothetical protein DICPUDRAFT_18829 [Dictyostelium purpureum]
gi|325086281|gb|EGC39673.1| hypothetical protein DICPUDRAFT_18829 [Dictyostelium purpureum]
Length = 310
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 128/328 (39%), Gaps = 67/328 (20%)
Query: 36 FDSSKPNPNGMEFDNLYLDMNGIIHPCTHPEDKPAPKD-EDEMMVAIFECIDRLFRIVRP 94
++ KP PN D++Y+D+N +H KP ++ E + + ++ + +
Sbjct: 14 YNLYKPLPNNFHTDHIYIDVNNYLHKTI--TKKPNIQNVEINALKRLKHFLNEIIYSTKI 71
Query: 95 RKLLYMAIDGVAPRAKMNQQRSRRFRASKE-------TAEKIAEVARIREKLLADGCILP 147
R ++ ++DG PR+KM QR RR + + E LL
Sbjct: 72 RHTIFFSVDGPGPRSKMTTQRERRLKNLNLHKLLYYINKNRDEETGENDINLLKHDYDYL 131
Query: 148 PEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEGEH 207
E F + TPGT FM L + YY ++L+ V +S A+ GEGE
Sbjct: 132 EGLELNVGFSTLNFTPGTSFMGLLKSFFIYYTKNKLSFAKN-----VFISAADRMGEGEW 186
Query: 208 KIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVC 267
KI +I +++ N + D+D+I+ L + N I+ +E NQ
Sbjct: 187 KIFQHIN----NSNYNLNDIITIASNDSDMILFCLLSKYNNIQILNKE--SNQV------ 234
Query: 268 GQMGHEMKECVGLDAEPNPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFER 327
+ ++ LRE + KE + + +
Sbjct: 235 ---------------------------------LYVNQLREAIYKESGIND-------RQ 254
Query: 328 ALDDWVFMCFFVGNDFLPHLPSLEIREG 355
A+ D+V + F +G D LP + S +++ G
Sbjct: 255 AIIDFVLLSFLMGTDHLPKVSSFKMQNG 282
>gi|402466304|gb|EJW01825.1| hypothetical protein EDEG_00349 [Edhazardia aedis USNM 41457]
Length = 1356
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 225 NTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQARPCDVCGQMGHEMKECVGLDAEP 284
N Q + DADL LG+ N T++RE Q R C C + GH +C +
Sbjct: 610 NNQITVYSPDADLFFLGMTLE--NITLMREN---QQLRKCMNCQKKGHLTNDCQNI---- 660
Query: 285 NPESVITFGSEVEFIFVRLSVLREYLEKELAMPNLPFPYSFERALDDWVFMCFFVGNDFL 344
+ FIFV L++L+ + E+ +PF ER + D++ +CF GNDFL
Sbjct: 661 ---------LKTLFIFVNLNLLKREIVNEICEK-IPFKAESERIIHDYILICFLCGNDFL 710
Query: 345 PHLPSLEIREGAVDRLVN 362
P + ++R A++ L N
Sbjct: 711 PTINCFDVRFNAIEILTN 728
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 146 LPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHDRLNNDPGWKGIKVILSDANVPGEG 205
L E + +D+N ITPGT FM ++ +H YI ++L ND W+ ++VI S + V GEG
Sbjct: 445 LNDESSDYAEWDTNAITPGTYFMEKVDKTIHNYIEEKLRNDKEWRNMRVIYSSSKVEGEG 504
Query: 206 EHKIMDYIR 214
E KI+ +IR
Sbjct: 505 EQKILRFIR 513
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 24/24 (100%)
Query: 96 KLLYMAIDGVAPRAKMNQQRSRRF 119
KLL+++IDGVAPRAK+NQQR+RR+
Sbjct: 147 KLLFISIDGVAPRAKLNQQRARRY 170
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 433 FRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDF 474
R EY+ GL W L Y + +W +++P+HY+P DF
Sbjct: 898 LRKKCAIEYLKGLQWTLNLYIKKQNNWGYFYPYHYSPLLEDF 939
>gi|349604424|gb|AEP99978.1| 5'-3' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 514
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 369 YKTQEQLRQEENG------GGGGRGVKRSFDDVDESSEEEESNDEVRLWEDGF---KDRY 419
YK + + + +EN G V S D+V++ +E+++ L+E F K Y
Sbjct: 127 YKEKRKSKDQENSICWAALDTNGEEVVASKDNVEDETEDDD------LFETEFRQYKRTY 180
Query: 420 YESKF--DVPKDDIAFRLMVGHEYVLGLCWVLKYYYQGCRSWKWYFPFHYAPFASDFINI 477
Y +K DV DD F YV + W+L YYY G +SW WY+P+HYAPF SD NI
Sbjct: 181 YMTKMGVDVVSDD--FLADQAACYVQAIQWILHYYYHGVQSWSWYYPYHYAPFLSDIRNI 238
Query: 478 AEVDTNFETG 487
+ + +FE G
Sbjct: 239 SALSIHFELG 248
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 664 QDSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEE 716
+DSPII++YP DFK DLNGK+ W+ V L+PF+DE+RL +A+ L EE
Sbjct: 280 EDSPIIEYYPPDFKTDLNGKQQEWEAVVLIPFIDEKRLLEAMETCNHSLKKEE 332
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 319 LPFPYSFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDRLVNLY 364
+ F Y ER +DDW+ M F VGNDF+PHLP L I A+ L Y
Sbjct: 11 IAFKYDIERIIDDWILMGFLVGNDFIPHLPHLHINHDALPLLYGTY 56
>gi|440798082|gb|ELR19152.1| 5'3' exoribonuclease 2, putative [Acanthamoeba castellanii str.
Neff]
Length = 81
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 24/103 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP FF WL++K P +I D +V DNLYLDMNG++H
Sbjct: 1 MGVPKFFAWLAQKCPQMIHPVTRDSIVDV-------------------DNLYLDMNGVVH 41
Query: 61 PCTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAID 103
C + E+E++VA F+ I+ L IVRP+K LYMA+D
Sbjct: 42 QC-----RQGANSEEELIVATFQYIEALVDIVRPKKYLYMAVD 79
>gi|428163037|gb|EKX32131.1| hypothetical protein GUITHDRAFT_121693 [Guillardia theta CCMP2712]
Length = 651
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 97/242 (40%), Gaps = 53/242 (21%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
G A RWL +P CV IP P+ +FD++ DMN ++H
Sbjct: 18 GKAASKRWLEASFPK----CV-----------IPISPRSPS---FKFDHVLFDMNDMLHT 59
Query: 62 CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
C K+ + +F +D RI P K + + DG P AK+ +Q
Sbjct: 60 CAR-----NCKNSSAVCKRVFRQVDSYLRIFTPGKSVVLCFDGPGPIAKIPKQ------- 107
Query: 122 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHD 181
E+ EK +VA S DS ITPGT FM+ + ++
Sbjct: 108 -VESREKRTKVA-------------------SSTLDSIDITPGTRFMSEVRELCFAHVVQ 147
Query: 182 RLNNDPGWKGIKVILSDANVPGEGEHKIMDYIRKQRAQPDHDPNTQHCLCGADADLIMLG 241
L G++ I LS ++V GEGE K++++I D + G D+DL +
Sbjct: 148 SLEQRGGYRDISFYLSCSDVAGEGELKLVEWIHTFVESASKD---RILFIGGDSDLTIQS 204
Query: 242 LA 243
LA
Sbjct: 205 LA 206
>gi|449689861|ref|XP_004212165.1| PREDICTED: 5'-3' exoribonuclease 1-like, partial [Hydra
magnipapillata]
Length = 99
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 52/91 (57%), Gaps = 21/91 (23%)
Query: 1 MGVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIH 60
MGVP F+RWLS +YP + Q + KIP EFDNLY+DMNGIIH
Sbjct: 17 MGVPKFYRWLSERYPCL--------SQTIREHKIP-----------EFDNLYIDMNGIIH 57
Query: 61 PCTHP--EDKPAPKDEDEMMVAIFECIDRLF 89
PC+HP ED E+E+M+ IF+ I+ +
Sbjct: 58 PCSHPNDEDPHFQITEEEIMMNIFDYIELML 88
>gi|170062001|ref|XP_001866480.1| 5'-3' exoribonuclease [Culex quinquefasciatus]
gi|167880051|gb|EDS43434.1| 5'-3' exoribonuclease [Culex quinquefasciatus]
Length = 158
Score = 72.8 bits (177), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/50 (72%), Positives = 37/50 (74%), Gaps = 5/50 (10%)
Query: 211 DYIRKQRAQPDHDPNTQHCLCGADADLIMLGLATHEPNFTIIREEFKPNQ 260
DYIR QRAQPDHDPNT H LC DAD IMLGLA H TIIREEF N+
Sbjct: 113 DYIRNQRAQPDHDPNTHHVLC--DADPIMLGLAMHS---TIIREEFLLNK 157
>gi|260944870|ref|XP_002616733.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
gi|238850382|gb|EEQ39846.1| hypothetical protein CLUG_03974 [Clavispora lusitaniae ATCC 42720]
Length = 483
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 665 DSPIIDFYPEDFKIDLNGKKFAWQGVALLPFVDEERLHKALAPYYEKLSVEESE 718
DS IIDFYPE F+ID+NG K +WQG+ALLPF+DE+RL A+ Y L+ +E E
Sbjct: 121 DSEIIDFYPETFQIDMNGAKMSWQGIALLPFIDEKRLLTAVRAKYSLLTDDERE 174
>gi|387219405|gb|AFJ69411.1| 5'-3' exoribonuclease 1, partial [Nannochloropsis gaditana CCMP526]
Length = 487
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 73/263 (27%)
Query: 2 GVPAFFRWLSRKYPSVIVHCVEDKPQEVNGQKIPFDSSKPNPNGMEFDNLYLDMNGIIHP 61
G+ F++W Y V+ S + EFD++ +D+N + H
Sbjct: 65 GIYGFWKWFRGHYKEVV-------------------SKVSSEQYAEFDHVLIDVNQLTHM 105
Query: 62 CTHPEDKPAPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFRA 121
+DED + + + + R R++R +K + +A DG AP AK+ QR RR
Sbjct: 106 AAR-----KARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRR--- 157
Query: 122 SKETAEKIAEVARIREKLLADGCILPPEKEKGSHFDSNCITPGTPFMARLSACLHYYIHD 181
EK+ + +S ++PGT FM R + + + H
Sbjct: 158 -------------------------AAEKDAKTPLNSLHLSPGTSFMRRAAEAVIDFCHT 192
Query: 182 RLNND-PGWKGIKVILSDANVPGEGEHKIMDYIRK-----QRAQPDHDPNTQH------- 228
RL +D + I+ +S + PGEGE K+MD+I + + D +
Sbjct: 193 RLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGREDGKEGGKQRGKKKKA 252
Query: 229 --------CLCGADADLIMLGLA 243
+ G DADL++ GLA
Sbjct: 253 GRKDSESIVVVGGDADLVLQGLA 275
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,106,952,591
Number of Sequences: 23463169
Number of extensions: 548506132
Number of successful extensions: 1431610
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 1424189
Number of HSP's gapped (non-prelim): 3913
length of query: 718
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 568
effective length of database: 8,839,720,017
effective search space: 5020960969656
effective search space used: 5020960969656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 81 (35.8 bits)