Query psy10160
Match_columns 558
No_of_seqs 426 out of 3368
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 19:23:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gtd_A Fumarase C, fumarate hy 100.0 1.8E-61 6.1E-66 488.2 22.6 313 243-556 154-482 (482)
2 3e04_A Fumarase, fumarate hydr 100.0 1.6E-61 5.3E-66 488.6 21.4 315 243-558 160-490 (490)
3 4adm_A Fumarase C, fumarate hy 100.0 3.4E-60 1.2E-64 482.9 21.4 310 247-558 158-489 (495)
4 1yfm_A Fumarase, YFUM; lyase, 100.0 4.4E-59 1.5E-63 475.6 24.1 315 242-558 157-488 (488)
5 3ocf_A Fumarate lyase:delta cr 100.0 2.8E-59 9.6E-64 474.2 21.9 307 245-554 156-478 (478)
6 3r6q_A Aspartase; aspartate am 100.0 2.2E-59 7.4E-64 476.2 20.5 313 243-557 134-462 (468)
7 1fur_A Fumarase C, FUMC; hydro 100.0 1.5E-58 5.2E-63 472.0 24.3 315 241-557 131-462 (467)
8 4hgv_A Fumarase C, fumarate hy 100.0 1.9E-58 6.7E-63 471.6 22.0 316 241-558 163-495 (495)
9 1jsw_A L-aspartase, L-aspartat 100.0 2.9E-58 9.9E-63 472.0 20.4 314 242-557 136-465 (478)
10 1vdk_A Fumarase C, fumarate hy 100.0 6.8E-58 2.3E-62 467.8 17.5 316 241-558 131-463 (466)
11 2pfm_A Adenylosuccinate lyase; 100.0 2.6E-53 8.8E-58 432.6 20.2 308 241-557 96-431 (444)
12 1q5n_A 3-carboxy-CIS,CIS-mucon 100.0 2.8E-53 9.4E-58 434.7 19.5 307 241-557 101-437 (454)
13 1c3c_A Protein (adenylosuccina 100.0 2E-53 7E-58 432.6 17.9 308 241-557 84-419 (429)
14 1re5_A 3-carboxy-CIS,CIS-mucon 100.0 3E-53 1E-57 433.9 18.1 307 241-557 97-433 (450)
15 3c8t_A Fumarate lyase; structu 100.0 2.2E-53 7.7E-58 434.5 17.1 307 241-557 95-431 (451)
16 2j91_A Adenylosuccinate lyase; 100.0 2.6E-50 8.9E-55 415.1 11.9 308 241-557 125-474 (503)
17 1dof_A Adenylosuccinate lyase; 100.0 1.3E-49 4.5E-54 400.2 15.4 284 241-537 87-397 (403)
18 1yis_A Adenylosuccinate lyase; 100.0 1.2E-49 4.3E-54 409.8 15.1 308 241-557 99-446 (478)
19 4eei_A Adenylosuccinate lyase; 100.0 2E-49 7E-54 401.5 13.5 305 241-557 85-421 (438)
20 2e9f_A Argininosuccinate lyase 100.0 1.6E-49 5.3E-54 406.2 11.3 305 241-556 101-435 (462)
21 2ptr_A Adenylosuccinate lyase; 100.0 2.9E-49 9.8E-54 404.8 12.6 305 241-557 114-447 (462)
22 1tj7_A Argininosuccinate lyase 100.0 3.5E-49 1.2E-53 403.1 11.7 303 241-555 100-431 (457)
23 1k7w_A Delta 2 crystallin; eye 100.0 4.8E-49 1.6E-53 403.2 8.5 304 241-556 106-437 (468)
24 2qga_B Adenylosuccinate lyase; 100.0 3.9E-47 1.3E-51 389.4 7.0 305 241-557 113-449 (465)
25 3bhg_A Adenylosuccinate lyase; 100.0 5.6E-45 1.9E-49 372.8 16.1 304 241-557 117-450 (459)
26 2fel_A 3-carboxy-CIS,CIS-mucon 100.0 5.5E-43 1.9E-47 345.7 9.9 243 241-496 99-355 (359)
27 3b43_A Titin; I-SET IG fold, e 99.9 1.3E-25 4.3E-30 241.1 24.1 276 13-304 252-551 (570)
28 3b43_A Titin; I-SET IG fold, e 99.9 3E-24 1E-28 230.4 22.9 276 13-304 156-457 (570)
29 3laf_A Deleted in colorectal c 99.9 3.3E-24 1.1E-28 219.6 20.6 283 7-304 69-382 (403)
30 2rik_A Titin; I-SET IG fold, p 99.9 2.8E-23 9.4E-28 202.1 24.5 205 13-218 60-283 (284)
31 3kld_A Contactin 4, axcam, BIG 99.9 7E-24 2.4E-28 216.0 20.5 282 6-304 54-364 (384)
32 3qs7_E FL cytokine receptor; i 99.9 2.1E-24 7.3E-29 222.2 14.3 244 15-277 104-368 (423)
33 3kld_A Contactin 4, axcam, BIG 99.9 6E-23 2.1E-27 209.1 23.6 205 12-218 155-382 (384)
34 1cs6_A Axonin-1; neural cell a 99.9 2.5E-23 8.5E-28 211.6 19.1 280 6-304 53-363 (382)
35 1qz1_A Neural cell adhesion mo 99.9 4.6E-22 1.6E-26 194.1 24.4 206 13-218 61-289 (291)
36 3laf_A Deleted in colorectal c 99.9 2.6E-22 8.8E-27 205.5 22.8 209 11-220 174-402 (403)
37 3qs9_E FL cytokine receptor; i 99.9 7.2E-24 2.5E-28 224.2 11.0 271 15-305 104-396 (527)
38 2wim_A N-CAM 2, NCAM2, neural 99.9 9.3E-22 3.2E-26 191.9 23.9 207 14-221 60-286 (291)
39 3p3y_A Neurofascin; IG domains 99.9 8.6E-23 2.9E-27 209.0 17.1 277 12-304 71-384 (404)
40 4fqp_A Poliovirus receptor; im 99.9 4.1E-22 1.4E-26 196.9 21.3 205 13-221 78-306 (313)
41 3dmk_A DOWN syndrome cell adhe 99.9 2.4E-22 8.4E-27 224.9 21.2 274 7-304 299-597 (816)
42 2ec8_A MAST/stem cell growth f 99.9 5.6E-22 1.9E-26 210.5 22.1 275 9-305 75-393 (524)
43 3p3y_A Neurofascin; IG domains 99.9 2E-21 7E-26 198.7 25.1 212 8-219 164-403 (404)
44 2o26_X MAST/stem cell growth f 99.9 6.4E-22 2.2E-26 193.1 19.8 205 11-220 54-289 (290)
45 2ec8_A MAST/stem cell growth f 99.9 3.2E-22 1.1E-26 212.4 18.0 248 8-276 161-447 (524)
46 1itb_B Type 1 interleukin-1 re 99.9 8E-22 2.8E-26 194.8 19.0 213 6-218 54-313 (315)
47 1e07_A Carcinoembryonic antige 99.9 2.8E-21 9.5E-26 210.4 24.2 267 12-304 340-621 (642)
48 2yd9_A Receptor-type tyrosine- 99.9 3.4E-21 1.2E-25 189.3 21.8 204 14-221 63-293 (304)
49 3qs9_E FL cytokine receptor; i 99.9 5.8E-22 2E-26 209.6 17.3 228 19-274 196-446 (527)
50 1wio_A CD4, T-cell surface gly 99.9 1.7E-21 5.7E-26 196.8 19.7 241 13-304 66-345 (363)
51 3mjg_X Beta-type platelet-deri 99.9 4.2E-21 1.4E-25 187.1 21.6 203 14-221 51-280 (289)
52 2y25_A Myomesin; structural pr 99.9 7.4E-22 2.5E-26 195.0 16.4 206 12-219 59-315 (317)
53 1bih_A Hemolin; insect immunit 99.9 3.1E-21 1.1E-25 196.8 21.3 277 11-304 59-377 (395)
54 4fom_A Poliovirus receptor-rel 99.9 4.5E-22 1.5E-26 196.0 13.5 206 13-221 73-302 (308)
55 2v5m_A Dscam; neurobiology SPL 99.9 8.8E-21 3E-25 193.0 23.5 274 9-304 54-370 (388)
56 3ejj_X Macrophage colony-stimu 99.9 3.3E-21 1.1E-25 187.8 19.4 207 12-220 49-282 (289)
57 1cs6_A Axonin-1; neural cell a 99.9 7.5E-21 2.6E-25 193.2 22.7 205 12-218 156-381 (382)
58 4dep_C Interleukin-1 receptor 99.9 7.6E-22 2.6E-26 198.0 14.7 214 6-219 71-333 (349)
59 2v5m_A Dscam; neurobiology SPL 99.9 7.6E-21 2.6E-25 193.5 22.1 202 7-217 156-387 (388)
60 2y23_A Myomesin; structural pr 99.9 2.2E-21 7.5E-26 191.2 16.7 203 14-218 58-311 (312)
61 1e07_A Carcinoembryonic antige 99.9 3.4E-20 1.2E-24 201.9 27.5 262 12-304 162-443 (642)
62 3u83_A Poliovirus receptor-rel 99.9 1.3E-20 4.5E-25 187.4 21.2 212 6-221 79-322 (331)
63 2rcj_C Light chain; immunoglob 99.9 5.2E-21 1.8E-25 203.0 18.9 256 7-277 59-365 (523)
64 1ry7_B FGFR-3, fibroblast grow 99.9 3.6E-21 1.2E-25 191.8 15.6 214 7-221 54-329 (334)
65 3oq3_B IFN-alpha/beta binding 99.9 2.1E-20 7.3E-25 185.9 21.2 206 11-217 86-328 (329)
66 1bih_A Hemolin; insect immunit 99.9 2.7E-20 9.2E-25 189.8 21.2 209 6-217 152-394 (395)
67 3dmk_A DOWN syndrome cell adhe 99.8 2.5E-20 8.4E-25 208.7 21.1 275 15-304 491-790 (816)
68 3o4o_C Interleukin-1 receptor 99.8 5.7E-21 2E-25 190.8 13.0 213 6-218 73-334 (339)
69 1qgc_4 Protein (immunoglobulin 99.8 7E-21 2.4E-25 197.1 13.2 259 6-276 63-386 (438)
70 3qs7_E FL cytokine receptor; i 99.8 7.7E-20 2.6E-24 188.1 17.6 198 22-224 199-419 (423)
71 1z7z_I Intercellular adhesion 99.8 2.3E-20 7.7E-25 194.1 13.4 236 14-274 142-409 (450)
72 4dkd_C Macrophage colony-stimu 99.8 4.9E-20 1.7E-24 179.7 14.7 200 14-221 51-283 (292)
73 2ocw_A Polymeric-immunoglobuli 99.8 3.3E-19 1.1E-23 191.7 21.1 272 15-305 186-527 (585)
74 3rjd_A High affinity immunoglo 99.8 2.9E-19 1E-23 171.1 17.5 192 12-218 46-261 (262)
75 2oz4_A Intercellular adhesion 99.8 9.7E-19 3.3E-23 168.2 19.1 196 9-219 51-264 (265)
76 2wng_A Tyrosine-protein phosph 99.8 1.1E-18 3.7E-23 173.3 18.9 204 12-217 72-318 (327)
77 2ocw_A Polymeric-immunoglobuli 99.8 2.9E-18 1E-22 184.4 23.7 205 15-221 291-548 (585)
78 2rcj_C Light chain; immunoglob 99.8 1E-18 3.5E-23 185.3 16.3 251 15-277 179-469 (523)
79 3v2a_R Vascular endothelial gr 99.8 1E-20 3.4E-25 210.4 0.0 198 14-221 515-758 (772)
80 4fa8_A Secreted protein BARF1; 99.8 7.7E-19 2.6E-23 161.5 12.5 121 13-212 68-195 (203)
81 2iep_A Muscle-specific kinase 99.8 4.8E-18 1.6E-22 154.5 17.3 135 6-220 52-191 (192)
82 2rik_A Titin; I-SET IG fold, p 99.8 4.3E-17 1.5E-21 158.1 24.1 199 63-277 20-234 (284)
83 1igt_B IGG2A intact antibody - 99.8 1.4E-18 4.7E-23 180.4 13.9 259 6-276 65-389 (444)
84 2yd1_A Tyrosine-protein phosph 99.8 2E-17 6.7E-22 153.3 18.7 137 14-223 64-204 (212)
85 2a38_A Titin; Z1Z2, structural 99.8 1.7E-17 5.9E-22 151.1 18.1 128 14-218 63-194 (194)
86 2v44_A NCAM2, neural cell adhe 99.8 1.2E-17 4.2E-22 151.5 16.0 127 14-217 58-185 (189)
87 1epf_A NCAM, protein (neural c 99.8 2.7E-17 9.2E-22 149.5 17.8 128 13-217 61-189 (191)
88 2v5t_A NCAM2, N-CAM 2, neural 99.8 4.7E-17 1.6E-21 147.4 19.2 79 139-218 108-187 (189)
89 2yd9_A Receptor-type tyrosine- 99.7 7.2E-18 2.5E-22 165.5 14.2 202 63-276 21-246 (304)
90 2j8h_A Titin, connectin; cardi 99.7 1.2E-17 4.2E-22 152.5 14.6 129 15-218 63-196 (197)
91 1z7z_I Intercellular adhesion 99.7 3.3E-17 1.1E-21 170.2 19.4 258 14-304 50-344 (450)
92 3vh8_G Killer cell immunoglobu 99.7 3.5E-18 1.2E-22 168.8 11.2 204 12-221 72-315 (316)
93 3r4d_A CEA-related cell adhesi 99.7 3.7E-17 1.3E-21 150.7 16.7 138 6-221 62-202 (208)
94 3jz7_A MCAR, CAR, coxsackievir 99.7 8.5E-18 2.9E-22 155.5 11.9 135 6-219 69-212 (214)
95 3grw_A Fibroblast growth facto 99.7 3.6E-17 1.2E-21 154.5 16.2 141 11-225 69-224 (241)
96 1iga_A IGA1; immunoglobulin; N 99.7 2.9E-17 1E-21 171.9 16.6 259 6-277 66-394 (475)
97 3knb_B Obscurin-like protein 1 99.7 2.4E-17 8.1E-22 134.6 12.3 92 128-220 12-106 (107)
98 3s97_C Contactin-1; carbonic a 99.7 8.3E-17 2.8E-21 147.3 17.2 135 12-218 64-200 (201)
99 3ojm_B Fibroblast growth facto 99.7 5.7E-17 1.9E-21 151.9 16.4 140 12-225 74-227 (231)
100 2yd6_A PTPRD protein; hydrolas 99.7 6.9E-17 2.4E-21 149.6 16.6 134 14-219 63-204 (212)
101 3v2a_R Vascular endothelial gr 99.7 2.7E-17 9.1E-22 182.8 16.3 271 13-305 85-399 (772)
102 2wv3_A Neuroplastin; igcam, me 99.7 3.2E-16 1.1E-20 142.3 20.0 155 63-218 18-189 (190)
103 1hzh_H IGG, immunoglobulin hea 99.7 1.6E-17 5.4E-22 173.0 11.9 259 6-276 65-398 (457)
104 3rbs_A Myomesin-1; immunoglobu 99.7 1.1E-16 3.9E-21 147.6 16.3 153 63-217 17-205 (207)
105 1wio_A CD4, T-cell surface gly 99.7 2.4E-17 8.3E-22 166.1 12.5 185 8-217 136-361 (363)
106 2c5d_C AXL oncogene, tyrosine- 99.7 1E-16 3.6E-21 146.2 15.5 123 13-217 67-191 (195)
107 1f97_A Junction adhesion molec 99.7 1E-16 3.4E-21 148.0 15.4 136 6-220 57-208 (212)
108 2fbo_J V1V2;, variable region- 99.7 9.1E-17 3.1E-21 152.6 14.3 81 137-217 144-250 (250)
109 3knb_A Titin; IG-like, titin, 99.7 9.7E-17 3.3E-21 129.3 12.2 92 128-219 4-99 (100)
110 2x1w_L Vascular endothelial gr 99.7 1.2E-16 4E-21 148.3 14.5 85 137-221 113-209 (213)
111 2vr9_A Roundabout 1, ROBO; imm 99.7 1.5E-16 5E-21 147.8 15.2 155 64-218 25-205 (217)
112 2v9r_A Roundabout homolog 1; p 99.7 1.1E-16 3.7E-21 147.9 13.0 151 63-221 24-204 (212)
113 1qz1_A Neural cell adhesion mo 99.7 2.2E-16 7.5E-21 153.6 15.3 231 61-304 14-271 (291)
114 1rhf_A Tyrosine-protein kinase 99.7 2.5E-16 8.5E-21 141.9 14.1 118 14-217 60-181 (182)
115 2nzi_A Titin; IG-domain, FNIII 99.7 1.3E-15 4.3E-20 149.3 20.1 209 61-273 16-249 (305)
116 3k0w_A Mucosa-associated lymph 99.7 6.7E-16 2.3E-20 143.7 17.1 138 12-220 63-203 (218)
117 1hng_A CD2; T lymphocyte adhes 99.7 1.4E-16 4.9E-21 142.9 12.1 121 6-217 52-174 (176)
118 2r15_A Myomesin-1; sarcomeric 99.7 2.6E-15 8.8E-20 138.7 20.6 153 66-219 20-210 (212)
119 1igy_B IGG1 intact antibody MA 99.7 9.8E-19 3.3E-23 180.9 -2.9 259 6-276 64-379 (434)
120 2ny1_B T-cell surface glycopro 99.7 3.5E-16 1.2E-20 141.3 13.4 75 139-221 107-181 (184)
121 1ry7_B FGFR-3, fibroblast grow 99.7 8.2E-17 2.8E-21 160.1 9.5 198 61-271 20-258 (334)
122 3lcy_A Titin; A-BAND, IG tande 99.7 1.8E-15 6.2E-20 137.8 17.6 158 61-219 19-196 (197)
123 2wim_A N-CAM 2, NCAM2, neural 99.7 1.2E-15 4.2E-20 148.3 17.3 203 61-277 16-236 (291)
124 3b5h_A Cervical EMMPRIN, HAB18 99.7 7.6E-16 2.6E-20 139.0 14.4 147 63-219 13-183 (184)
125 1nbq_A JAM, junctional adhesio 99.7 7.6E-17 2.6E-21 148.5 7.8 133 6-217 60-207 (209)
126 1ugn_A LIR1, leukocyte immunog 99.7 4.6E-16 1.6E-20 142.4 12.8 79 139-218 110-197 (198)
127 3bp6_B Programmed cell death 1 99.7 9.3E-16 3.2E-20 140.7 14.8 78 141-221 115-195 (202)
128 2ifg_A High affinity nerve gro 99.7 4.4E-17 1.5E-21 163.2 5.8 182 25-220 136-346 (347)
129 2jll_A NCAM2, neural cell adhe 99.7 4.8E-15 1.6E-19 150.5 20.3 162 63-224 15-199 (389)
130 3oq3_B IFN-alpha/beta binding 99.7 4.3E-16 1.5E-20 154.7 12.2 221 64-304 45-311 (329)
131 2cqv_A MLCK, myosin light chai 99.7 1.1E-15 3.9E-20 126.4 12.7 99 128-227 6-107 (114)
132 3p2t_A Leukocyte immunoglobuli 99.6 3.7E-16 1.3E-20 142.8 10.6 131 12-218 56-195 (196)
133 2edj_A Roundabout homolog 2; K 99.6 7.5E-16 2.6E-20 124.1 11.0 93 128-220 7-99 (100)
134 4f80_A Butyrophilin subfamily 99.6 5.5E-16 1.9E-20 145.0 11.7 129 13-221 82-215 (226)
135 3sgj_C Human FCG3A receptor; r 99.6 9.7E-16 3.3E-20 141.0 12.9 151 60-226 18-181 (204)
136 2d3v_A Leukocyte immunoglobuli 99.6 2.3E-16 7.8E-21 144.2 8.3 69 139-208 109-181 (196)
137 1u2h_A APEG-1, aortic preferen 99.6 2.2E-15 7.6E-20 121.0 13.2 92 128-219 4-98 (99)
138 1uct_A Immunoglobulin alpha FC 99.6 9.5E-16 3.2E-20 142.6 12.4 82 138-221 114-200 (218)
139 1zvo_C Myeloma immunoglobulin 99.6 4.1E-15 1.4E-19 156.9 18.5 205 6-210 66-388 (512)
140 2va4_A NCAM2, N-CAM 2, neural 99.6 1.5E-14 5E-19 131.2 19.2 154 64-218 20-192 (192)
141 2yd1_A Tyrosine-protein phosph 99.6 1.2E-15 4E-20 141.2 12.1 168 128-304 5-180 (212)
142 3mj6_A Junctional adhesion mol 99.6 2.9E-15 1E-19 143.8 15.4 131 7-219 71-237 (268)
143 1qgc_4 Protein (immunoglobulin 99.6 7.2E-17 2.5E-21 166.9 4.1 198 14-215 181-435 (438)
144 1dr9_A B7-1 (CD80), T lymphocy 99.6 3.8E-15 1.3E-19 136.5 14.9 73 143-215 120-197 (201)
145 3o4o_C Interleukin-1 receptor 99.6 1.6E-15 5.6E-20 151.1 13.1 203 61-276 30-271 (339)
146 2c1o_A IGK-C protein; FAB frag 99.6 5.8E-16 2E-20 147.6 9.3 184 21-209 11-245 (254)
147 1fnl_A Low affinity immunoglob 99.6 1.5E-15 5.1E-20 136.0 11.4 75 139-219 98-174 (175)
148 1oll_A NK receptor; immune sys 99.6 8.6E-16 3E-20 139.4 9.6 77 139-218 108-187 (188)
149 2kkq_A Myotilin; unknown funct 99.6 2.1E-15 7.3E-20 125.1 11.2 94 128-221 14-111 (116)
150 3sbw_C Programmed cell death 1 99.6 3E-15 1E-19 139.3 13.5 81 140-221 127-213 (222)
151 2oz4_A Intercellular adhesion 99.6 1.8E-15 6.3E-20 145.2 12.3 192 58-274 12-224 (265)
152 3rjd_A High affinity immunoglo 99.6 7.7E-15 2.6E-19 140.2 16.5 211 61-304 13-240 (262)
153 1g1c_A Immunoglobulin-like dom 99.6 6.4E-15 2.2E-19 118.3 13.2 92 128-219 4-98 (99)
154 4i0k_A CD276 antigen; immunogl 99.6 1.2E-15 4.1E-20 142.1 10.1 82 140-221 121-208 (222)
155 3irg_B Obscurin-like protein 1 99.6 5.2E-15 1.8E-19 120.7 12.5 93 127-220 11-106 (107)
156 1wit_A Twitchin 18TH IGSF modu 99.6 2.1E-15 7E-20 119.8 9.8 88 129-217 2-92 (93)
157 2y25_A Myomesin; structural pr 99.6 2.2E-16 7.7E-21 155.5 5.1 231 62-304 19-296 (317)
158 1vca_A VCAM-D1,2, human vascul 99.6 2.4E-15 8E-20 138.2 11.5 130 13-221 53-199 (202)
159 3qp3_A Titin; I-SET IG-like, s 99.6 5.8E-15 2E-19 119.5 12.6 93 127-220 6-101 (103)
160 2gi7_A GPVI protein; IG-like d 99.6 7.6E-16 2.6E-20 139.2 7.8 119 11-207 49-168 (184)
161 1za6_B IGG heavy chain; immuno 99.6 3.5E-15 1.2E-19 149.2 13.1 203 6-208 65-330 (344)
162 2eo9_A Roundabout homolog 1; b 99.6 2.3E-15 7.8E-20 125.4 9.7 94 128-221 7-100 (118)
163 4dep_C Interleukin-1 receptor 99.6 5.7E-15 1.9E-19 147.7 14.5 231 63-305 22-315 (349)
164 1itb_B Type 1 interleukin-1 re 99.6 4.3E-15 1.5E-19 146.3 13.1 198 61-277 17-251 (315)
165 2pet_A Lutheran blood group gl 99.6 5.2E-15 1.8E-19 138.6 12.8 130 12-217 75-229 (231)
166 1jbj_A CD3 epsilon and gamma e 99.6 1.8E-15 6E-20 137.1 9.2 61 141-209 119-179 (186)
167 4frw_A Poliovirus receptor-rel 99.6 6.9E-15 2.4E-19 135.8 13.3 79 138-217 127-209 (218)
168 3kvq_A Vascular endothelial gr 99.6 2.5E-15 8.5E-20 122.9 9.1 96 127-222 8-103 (108)
169 3puc_A Titin; I-SET IG-like do 99.6 1.2E-14 4E-19 116.8 12.8 92 127-219 4-98 (99)
170 2kdg_A Myotilin; immonoglobuli 99.6 8.2E-15 2.8E-19 117.9 11.9 92 128-219 4-98 (100)
171 2j8h_A Titin, connectin; cardi 99.6 5.4E-15 1.9E-19 134.8 12.2 167 128-304 3-178 (197)
172 3mj8_L Stimulatory hamster ant 99.6 3.1E-15 1.1E-19 138.3 10.7 131 7-214 59-208 (213)
173 2yd6_A PTPRD protein; hydrolas 99.6 1.8E-14 6.1E-19 133.3 15.7 142 128-278 5-151 (212)
174 2if7_A SLAM family member 6; N 99.6 2.5E-14 8.6E-19 130.3 16.3 121 7-214 62-187 (193)
175 2yr3_A Myosin light chain kina 99.6 4.9E-15 1.7E-19 119.1 10.0 91 126-217 8-98 (99)
176 2dm2_A Palladin; beta-sandwich 99.6 3.3E-15 1.1E-19 122.7 9.1 98 128-225 7-108 (110)
177 1f2q_A High affinity immunoglo 99.6 2E-14 7E-19 128.7 14.5 146 60-221 15-173 (176)
178 1hnf_A CD2; T lymphocyte adhes 99.6 2.8E-14 9.5E-19 128.4 15.2 120 6-216 57-178 (182)
179 2dm3_A KIAA0992 protein, palla 99.6 3.4E-15 1.2E-19 122.5 7.7 98 128-225 8-108 (110)
180 2wqr_A IG epsilon chain C regi 99.6 5.4E-15 1.9E-19 146.3 10.1 193 15-208 73-309 (323)
181 2ghw_B Anti-SARS SCFV antibody 99.6 2.8E-14 9.5E-19 135.3 14.6 90 129-218 135-241 (247)
182 3irg_A Titin; IG-like, titin, 99.6 1.9E-14 6.6E-19 115.6 11.5 92 128-219 4-99 (100)
183 3lcy_A Titin; A-BAND, IG tande 99.6 2E-14 6.9E-19 130.8 12.7 138 127-277 5-145 (197)
184 2e7c_A Myosin-binding protein 99.6 4.3E-14 1.5E-18 117.5 13.1 94 128-221 20-117 (118)
185 1fhg_A Telokin; immunoglobulin 99.6 3.1E-14 1.1E-18 124.5 12.7 104 117-221 29-136 (154)
186 2o26_X MAST/stem cell growth f 99.6 2.4E-14 8.1E-19 139.2 13.2 187 61-275 24-229 (290)
187 2ckn_A Basic fibroblast growth 99.6 1.6E-14 5.6E-19 115.0 9.9 87 128-217 8-94 (95)
188 2y23_A Myomesin; structural pr 99.6 2E-14 6.8E-19 141.1 12.6 221 73-304 27-293 (312)
189 3d9a_L Light chain of hyhel10 99.5 7.2E-15 2.5E-19 135.9 8.3 72 141-212 124-206 (213)
190 2iep_A Muscle-specific kinase 99.5 4.1E-15 1.4E-19 134.9 6.5 162 128-304 6-170 (192)
191 2zg1_A Sialic acid-binding IG- 99.5 4.1E-14 1.4E-18 130.8 13.4 73 141-217 135-213 (214)
192 1p6f_A NKP46, natural cytotoxi 99.5 1.5E-14 5.2E-19 136.6 10.4 86 139-227 111-199 (242)
193 2yuz_A Myosin-binding protein 99.5 1.4E-14 4.9E-19 116.4 8.5 89 128-221 6-97 (100)
194 1f3r_B FV antibody fragment; I 99.5 1.7E-14 5.7E-19 137.8 10.5 86 135-220 145-246 (257)
195 2a38_A Titin; Z1Z2, structural 99.5 2.3E-14 8E-19 130.1 10.9 138 128-277 4-145 (194)
196 3ry4_A Low affinity immunoglob 99.5 6.8E-14 2.3E-18 124.3 13.5 141 61-217 16-169 (170)
197 2bk8_A Connectin, M1, titin he 99.5 8.6E-14 2.9E-18 111.2 12.8 87 132-219 4-94 (97)
198 2dru_A Chimera of CD48 antigen 99.5 6.7E-14 2.3E-18 125.8 13.5 61 145-215 116-177 (180)
199 1ccz_A Protein (CD58); LFA-3, 99.5 6.1E-14 2.1E-18 125.0 12.7 118 5-216 49-168 (171)
200 1q0x_L FAB 9B1, light chain; a 99.5 4E-14 1.4E-18 130.8 11.7 72 141-212 127-208 (212)
201 1epf_A NCAM, protein (neural c 99.5 2.1E-14 7.2E-19 130.1 9.7 161 129-304 2-172 (191)
202 1waa_A Titin; metal binding pr 99.5 4E-14 1.4E-18 112.1 9.9 86 128-219 4-92 (93)
203 1gxe_A Myosin binding protein 99.5 1.4E-14 4.9E-19 123.6 7.9 83 136-218 25-138 (139)
204 1lk3_L 9D7 light chain; antige 99.5 2.4E-14 8.2E-19 132.1 9.9 69 141-209 123-202 (210)
205 3nl4_L Antigen binding fragmen 99.5 3.7E-14 1.3E-18 131.0 11.2 72 130-203 115-198 (213)
206 1wwb_X Protein (brain derived 99.5 5.3E-14 1.8E-18 113.8 10.7 80 142-221 14-100 (103)
207 3pv7_A B7-H6, IG-like domain-c 99.5 9.9E-14 3.4E-18 131.6 14.3 79 141-219 130-226 (248)
208 1nct_A Titin; cell adhesion, g 99.5 9.6E-15 3.3E-19 118.9 6.1 90 128-218 13-105 (106)
209 3vh8_G Killer cell immunoglobu 99.5 8.2E-14 2.8E-18 137.3 13.7 204 56-277 30-259 (316)
210 2dav_A SLOW MYBP-C, myosin-bin 99.5 4.8E-14 1.6E-18 117.1 10.1 99 130-228 8-121 (126)
211 1qok_A MFE-23 recombinant anti 99.5 6.4E-14 2.2E-18 135.8 12.4 91 129-220 162-269 (282)
212 2xzc_L FAB A.17 light chain; i 99.5 6.9E-14 2.4E-18 129.6 11.9 69 142-210 127-206 (216)
213 1q9r_B S25-2 FAB (IGG1K) heavy 99.5 2.9E-14 1E-18 132.8 9.3 72 141-215 139-219 (222)
214 1nqb_A Single-chain antibody f 99.5 8.7E-14 3E-18 132.8 12.7 84 135-218 127-232 (256)
215 3tv3_L PGT128 light chain, IG 99.5 3.3E-14 1.1E-18 131.3 9.4 85 129-213 111-205 (211)
216 3caf_A Fibroblast growth facto 99.5 1E-13 3.5E-18 111.4 11.1 89 129-217 4-99 (100)
217 1c1e_H Catalytic antibody 1E9 99.5 3E-14 1E-18 132.4 9.0 73 140-215 135-216 (219)
218 1igt_B IGG2A intact antibody - 99.5 8.1E-14 2.8E-18 144.3 13.3 192 14-206 184-432 (444)
219 1nkr_A P58-CL42 KIR; inhibitor 99.5 6E-14 2E-18 128.6 10.9 65 139-206 117-184 (201)
220 1he7_A High affinity nerve gro 99.5 8.8E-14 3E-18 115.4 10.7 80 143-222 14-102 (126)
221 3ojm_B Fibroblast growth facto 99.5 1.1E-13 3.8E-18 129.3 12.7 134 128-271 14-154 (231)
222 1iga_A IGA1; immunoglobulin; N 99.5 2.2E-13 7.4E-18 142.4 16.3 192 15-208 191-443 (475)
223 3s96_B 3B5H10 FAB light chain; 99.5 5.3E-14 1.8E-18 130.5 10.4 82 130-213 122-214 (218)
224 2va4_A NCAM2, N-CAM 2, neural 99.5 8E-14 2.7E-18 126.3 11.3 128 129-273 2-132 (192)
225 1hzh_H IGG, immunoglobulin hea 99.5 2.9E-14 1E-18 148.3 9.3 192 15-208 195-443 (457)
226 2p1y_A Bispecific alpha/beta T 99.5 8.9E-14 3E-18 131.0 11.7 75 132-206 130-222 (238)
227 2nzi_A Titin; IG-domain, FNIII 99.5 6.2E-14 2.1E-18 137.2 11.0 166 128-304 3-178 (305)
228 2c5d_C AXL oncogene, tyrosine- 99.5 1.3E-13 4.5E-18 125.4 12.2 134 129-277 2-149 (195)
229 1b6u_A KIR2DL3, P58 killer cel 99.5 4.9E-14 1.7E-18 134.3 9.5 117 140-274 117-241 (257)
230 3uzq_A Anti-dengue MAB 4E11; d 99.5 8.1E-14 2.8E-18 132.7 11.0 93 129-221 133-246 (253)
231 3ejj_X Macrophage colony-stimu 99.5 2.1E-13 7.1E-18 132.3 14.0 193 61-277 16-229 (289)
232 2jll_A NCAM2, neural cell adhe 99.5 7.4E-13 2.5E-17 134.3 18.6 206 6-217 51-286 (389)
233 1igy_B IGG1 intact antibody MA 99.5 2.5E-14 8.4E-19 147.8 7.7 193 14-208 180-424 (434)
234 2lu7_A Obscurin-like protein 1 99.5 9.4E-14 3.2E-18 107.4 9.0 79 136-220 3-84 (84)
235 3cx2_A Myosin-binding protein 99.5 1.4E-13 4.7E-18 112.5 10.4 90 129-218 4-107 (108)
236 1nfd_E H57 FAB; complex (immun 99.5 1.6E-14 5.6E-19 133.4 5.4 81 129-209 113-202 (212)
237 3bfo_A Mucosa-associated lymph 99.5 2.3E-13 7.9E-18 107.3 11.1 84 129-219 3-87 (91)
238 3sob_L Antibody light chain; b 99.5 1.2E-13 4.3E-18 129.7 11.2 131 6-212 82-229 (237)
239 3r06_A Anti-mouse CD3epsilon a 99.5 7.9E-14 2.7E-18 128.8 9.6 82 129-210 112-204 (213)
240 4fmk_A Poliovirus receptor-rel 99.5 2.3E-13 7.9E-18 126.2 12.6 78 141-219 133-219 (225)
241 3umt_A SCFV heavy chain and li 99.5 1.3E-13 4.3E-18 131.6 10.6 92 129-220 138-246 (256)
242 1mju_H Immunoglobulin MS6-12; 99.5 1.1E-13 3.8E-18 129.5 10.0 79 140-221 132-219 (227)
243 3auv_A SC-DSFV derived from th 99.5 1.9E-13 6.5E-18 132.0 11.9 83 136-218 141-253 (276)
244 2v44_A NCAM2, neural cell adhe 99.5 9.2E-14 3.1E-18 125.7 8.9 157 131-304 4-168 (189)
245 2cr3_A Basic fibroblast growth 99.5 1.5E-13 5.2E-18 110.2 9.2 83 136-221 10-92 (99)
246 3bp6_B Programmed cell death 1 99.5 1.5E-13 5.1E-18 125.9 10.4 127 134-276 7-144 (202)
247 3juy_B 3B3 single chain varian 99.5 2.4E-13 8.2E-18 129.7 12.2 80 129-208 149-245 (256)
248 3u83_A Poliovirus receptor-rel 99.5 8.1E-13 2.8E-17 130.8 16.4 171 116-304 117-301 (331)
249 1x44_A Myosin-binding protein 99.5 1.5E-13 5.1E-18 111.2 9.0 90 129-223 7-100 (103)
250 1pz5_B Heavy chain of FAB (SYA 99.5 1.4E-13 4.7E-18 128.0 10.0 72 140-214 136-216 (220)
251 1sy6_A T-cell surface glycopro 99.5 2.4E-13 8.4E-18 124.8 11.5 74 142-217 126-202 (204)
252 1hng_A CD2; T lymphocyte adhes 99.5 1.5E-13 5.3E-18 123.0 9.8 118 139-276 6-136 (176)
253 1rhf_A Tyrosine-protein kinase 99.5 1.9E-13 6.4E-18 122.8 10.5 132 129-276 2-140 (182)
254 1f97_A Junction adhesion molec 99.5 2.8E-13 9.5E-18 124.7 11.8 133 129-277 1-148 (212)
255 2edn_A Myosin-binding protein 99.5 8E-14 2.7E-18 114.4 7.1 92 129-220 12-117 (118)
256 2edf_A Obscurin; beta-sandwich 99.5 1.4E-13 4.9E-18 111.3 8.5 91 128-224 7-100 (103)
257 3rbs_A Myomesin-1; immunoglobu 99.5 3.5E-14 1.2E-18 130.8 5.2 159 129-304 3-188 (207)
258 2fbj_H IGA-kappa J539 FAB (hea 99.4 3.3E-13 1.1E-17 125.6 11.4 69 140-210 133-212 (220)
259 3d9a_H Heavy chain of hyhel10 99.4 1.1E-13 3.7E-18 127.8 7.9 70 140-212 129-207 (210)
260 4fa8_A Secreted protein BARF1; 99.4 1.5E-13 5E-18 126.1 8.7 124 138-276 2-147 (203)
261 3k0w_A Mucosa-associated lymph 99.4 5.4E-13 1.8E-17 123.9 12.5 161 128-304 17-182 (218)
262 2v5t_A NCAM2, N-CAM 2, neural 99.4 4.5E-13 1.5E-17 120.9 11.6 136 129-277 2-140 (189)
263 1dee_B IGM RF 2A2; FAB-IBP com 99.4 7.1E-13 2.4E-17 123.6 13.2 71 141-213 138-221 (223)
264 3bkj_L WO2 IGG2A FAB fragment 99.4 1.5E-13 5E-18 130.8 8.4 69 141-209 162-241 (252)
265 2v9t_A Roundabout homolog 1; s 99.4 7.2E-13 2.5E-17 109.8 11.6 93 127-219 7-109 (117)
266 2wv3_A Neuroplastin; igcam, me 99.4 1.4E-12 4.7E-17 118.1 14.4 124 129-272 3-129 (190)
267 3gkz_A Anti-methamphetamine si 99.4 4.5E-13 1.5E-17 127.8 11.8 90 130-219 142-249 (257)
268 2j6e_L IGM, FAB light chain; a 99.4 8.2E-14 2.8E-18 130.8 6.4 72 142-213 148-229 (234)
269 3esu_F Antibody 14B7* light ch 99.4 4E-13 1.4E-17 127.5 11.3 70 135-204 137-231 (250)
270 1gl4_B Basement membrane-speci 99.4 8.2E-13 2.8E-17 105.7 10.9 87 129-218 9-97 (98)
271 3eow_R Poliovirus receptor; im 99.4 1.2E-13 4E-18 128.6 6.6 75 142-217 128-210 (221)
272 3grw_A Fibroblast growth facto 99.4 4.9E-13 1.7E-17 125.9 10.9 133 129-271 11-150 (241)
273 2wng_A Tyrosine-protein phosph 99.4 4.1E-12 1.4E-16 125.7 18.0 125 138-277 126-264 (327)
274 4fqp_A Poliovirus receptor; im 99.4 1.2E-12 4E-17 128.7 13.9 171 117-304 105-285 (313)
275 2e6p_A Obscurin-like protein 1 99.4 2.3E-13 7.9E-18 110.2 7.3 90 129-224 7-102 (104)
276 1vca_A VCAM-D1,2, human vascul 99.4 8.6E-13 2.9E-17 121.0 11.9 127 133-276 4-135 (202)
277 2v9r_A Roundabout homolog 1; p 99.4 7E-13 2.4E-17 122.1 11.4 163 128-304 8-182 (212)
278 2lvc_A Obscurin-like protein 1 99.4 2.4E-13 8.2E-18 106.9 6.9 84 128-217 3-91 (91)
279 1moe_A Anti-CEA MAB T84.66; an 99.4 9.1E-13 3.1E-17 124.1 12.2 70 136-205 126-220 (240)
280 2cry_A KIN of IRRE-like protei 99.4 2E-14 6.7E-19 120.4 0.4 97 124-221 9-115 (122)
281 2dlt_A Myosin binding protein 99.4 2.8E-13 9.6E-18 110.2 7.1 87 128-218 7-96 (106)
282 3nl4_H Antigen binding fragmen 99.4 2E-13 6.9E-18 126.4 7.0 76 140-216 131-211 (215)
283 4hwu_A Fibroblast growth facto 99.4 1.3E-12 4.4E-17 103.9 10.7 83 135-221 7-89 (95)
284 2znx_A SCFV; fluorotryptohpan, 99.4 9.8E-13 3.3E-17 124.3 11.5 67 139-205 132-222 (242)
285 2eny_A Obscurin; beta-sandwich 99.4 2.9E-13 1E-17 109.6 6.8 90 128-222 7-100 (104)
286 2dku_A KIAA1556 protein; beta- 99.4 6.8E-13 2.3E-17 107.2 9.0 92 128-225 7-101 (103)
287 3m45_A Cell adhesion molecule 99.4 7.5E-13 2.6E-17 107.8 9.3 92 128-220 5-107 (108)
288 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.4 2.2E-12 7.6E-17 122.9 13.8 89 129-218 137-247 (256)
289 1dn0_B IGM-kappa cold agglutin 99.4 2.1E-12 7.2E-17 121.2 13.2 76 141-218 137-226 (232)
290 1op3_H FAB 2G12, heavy chain; 99.4 4.7E-13 1.6E-17 125.0 8.5 67 141-210 140-216 (225)
291 1wwc_A Protein (NT-3 growth fa 99.4 7.2E-13 2.5E-17 110.0 8.7 93 126-221 5-103 (118)
292 1nbq_A JAM, junctional adhesio 99.4 7.6E-13 2.6E-17 121.4 9.5 133 129-277 4-150 (209)
293 2edh_A Obscurin; structural ge 99.4 1.7E-12 5.7E-17 106.9 10.6 87 128-221 18-107 (113)
294 2vr9_A Roundabout 1, ROBO; imm 99.4 2.3E-12 7.9E-17 119.2 12.8 135 128-277 8-151 (217)
295 1svz_A Immunoglobulin;, single 99.4 1.3E-12 4.4E-17 123.7 11.0 68 138-205 136-228 (247)
296 4fom_A Poliovirus receptor-rel 99.4 6.2E-13 2.1E-17 130.3 9.0 129 134-276 119-254 (308)
297 3bae_H WO2 IGG2A FAB fragment 99.4 9.8E-13 3.4E-17 123.0 9.9 72 140-214 141-221 (228)
298 3ux9_B SCFV antibody; five hel 99.4 4.2E-12 1.4E-16 120.9 14.2 69 138-206 143-236 (256)
299 2gi7_A GPVI protein; IG-like d 99.4 2.3E-13 7.9E-18 122.8 5.1 153 128-304 7-161 (184)
300 2yuv_A Myosin-binding protein 99.4 2.2E-12 7.6E-17 103.6 10.2 88 128-221 6-97 (100)
301 2ens_A Advanced glycosylation 99.4 4.6E-13 1.6E-17 106.7 5.8 84 128-218 9-94 (96)
302 1uct_A Immunoglobulin alpha FC 99.4 1.9E-13 6.7E-18 126.9 4.2 163 128-305 8-175 (218)
303 2d3v_A Leukocyte immunoglobuli 99.4 7.7E-13 2.6E-17 120.6 7.8 162 128-305 4-174 (196)
304 2edk_A Myosin-binding protein 99.4 2.5E-13 8.6E-18 109.4 4.0 88 128-220 7-100 (101)
305 1pd6_A Cardiac MYBP-C;, myosin 99.4 1.4E-12 4.9E-17 105.5 8.4 86 128-218 14-103 (104)
306 3p2t_A Leukocyte immunoglobuli 99.4 5.2E-13 1.8E-17 121.7 6.5 159 129-304 5-172 (196)
307 3jz7_A MCAR, CAR, coxsackievir 99.4 1.6E-12 5.6E-17 119.6 9.9 155 135-304 6-193 (214)
308 3mtr_A N-CAM-1, NCAM-1, neural 99.4 4.1E-12 1.4E-16 117.5 12.6 97 128-225 18-118 (215)
309 3qr2_A Basigin; CD147, EMMPRIN 99.4 2.1E-12 7.3E-17 110.3 9.6 84 127-210 19-117 (137)
310 3s97_C Contactin-1; carbonic a 99.4 4.4E-13 1.5E-17 122.2 5.5 168 129-304 8-182 (201)
311 2wqr_A IG epsilon chain C regi 99.4 7.9E-13 2.7E-17 130.7 7.8 144 65-209 26-204 (323)
312 3bqu_C 3H6 FAB light chain; be 99.4 1.4E-13 4.8E-18 129.1 2.2 68 141-208 146-224 (233)
313 4dkd_C Macrophage colony-stimu 99.4 1.2E-12 3.9E-17 127.2 8.7 219 61-304 16-262 (292)
314 2k1m_A Myosin-binding protein 99.3 2.6E-12 8.8E-17 102.1 9.1 84 129-218 8-94 (95)
315 3so5_A LIG-3, leucine-rich rep 99.3 2E-12 6.8E-17 105.8 8.7 90 128-217 9-111 (112)
316 2e6q_A Obscurin-like protein 1 99.3 9.7E-12 3.3E-16 101.2 12.6 89 128-221 7-107 (112)
317 3s35_X Vascular endothelial gr 99.3 3.5E-12 1.2E-16 106.5 10.3 86 136-221 15-112 (122)
318 3liz_H 4C3 monoclonal antibody 99.3 1.9E-12 6.5E-17 123.2 9.8 77 139-218 134-219 (253)
319 1ugn_A LIR1, leukocyte immunog 99.3 3.4E-13 1.2E-17 123.2 4.4 162 128-305 4-175 (198)
320 1gsm_A Madcam-1, mucosal addre 99.3 1.8E-12 6E-17 118.2 9.0 118 139-277 17-141 (210)
321 2fbo_J V1V2;, variable region- 99.3 2.3E-12 7.8E-17 122.0 10.2 134 132-276 5-177 (250)
322 2gki_A Nuclease; anti-DNA anti 99.3 3.1E-12 1.1E-16 124.4 11.2 89 131-219 161-272 (291)
323 2e7b_A Obscurin; IG-like domai 99.3 1.2E-12 4E-17 105.8 6.7 88 128-221 7-97 (103)
324 3rbg_A Cytotoxic and regulator 99.3 2.1E-12 7.1E-17 108.3 8.4 87 135-222 7-104 (124)
325 2v5y_A Receptor-type tyrosine- 99.3 2.2E-11 7.6E-16 134.2 18.8 198 26-225 45-266 (731)
326 2gjj_A A21 single-chain antibo 99.3 5.4E-12 1.8E-16 120.8 12.0 68 138-205 147-239 (264)
327 1zvo_C Myeloma immunoglobulin 99.3 3.3E-11 1.1E-15 127.0 19.1 153 63-218 312-504 (512)
328 3m8o_H Immunoglobulin A1 heavy 99.3 9.5E-12 3.2E-16 115.6 13.2 67 142-210 136-214 (221)
329 3fku_X Neutralizing antibody F 99.3 1.9E-12 6.6E-17 125.1 8.5 88 132-220 143-251 (280)
330 1x9q_A SCFV, 4M5.3 anti-fluore 99.3 5E-12 1.7E-16 121.3 11.1 69 137-205 159-254 (268)
331 2cr6_A KIAA1556 protein, obscu 99.3 3.9E-12 1.3E-16 105.0 8.8 88 129-221 13-104 (115)
332 3nl4_L Antigen binding fragmen 99.3 3.1E-12 1.1E-16 118.0 9.0 134 132-277 4-157 (213)
333 3r4d_A CEA-related cell adhesi 99.3 1.8E-12 6.3E-17 119.0 7.3 156 134-304 4-180 (208)
334 4dzb_B Vbeta2 (MAIT T cell rec 99.3 3E-12 1E-16 121.1 8.9 75 135-210 131-222 (246)
335 1hnf_A CD2; T lymphocyte adhes 99.3 4.2E-12 1.4E-16 114.0 9.2 119 138-276 8-141 (182)
336 3omz_A Human vdelta1 gamma del 99.3 5.5E-12 1.9E-16 120.4 10.6 77 129-205 136-231 (259)
337 3pl6_D MBP peptide / T-cell re 99.3 4.6E-12 1.6E-16 121.5 9.9 72 136-209 153-242 (268)
338 1oll_A NK receptor; immune sys 99.3 1.9E-12 6.4E-17 117.2 6.3 161 129-305 4-167 (188)
339 1fnl_A Low affinity immunoglob 99.3 4.5E-12 1.6E-16 113.1 8.6 147 128-304 6-154 (175)
340 2cpc_A KIAA0657 protein; immun 99.3 1.3E-11 4.6E-16 101.4 10.7 87 129-221 10-102 (113)
341 2if7_A SLAM family member 6; N 99.3 5.1E-12 1.7E-16 114.9 9.0 128 135-275 4-150 (193)
342 3o3u_N Maltose-binding peripla 99.3 1.6E-11 5.5E-16 131.6 14.3 124 8-209 425-567 (581)
343 1ccz_A Protein (CD58); LFA-3, 99.3 5.3E-12 1.8E-16 112.3 8.3 116 138-276 4-131 (171)
344 4ei6_B Vbeta16 XV19 type II na 99.3 1.1E-11 3.7E-16 117.1 10.6 72 136-209 131-220 (245)
345 3bn9_D E2 FAB heavy chain; ant 99.3 2.8E-12 9.4E-17 122.2 6.4 66 141-209 145-220 (257)
346 1jbj_A CD3 epsilon and gamma e 99.3 5.3E-12 1.8E-16 114.0 7.9 149 140-304 10-170 (186)
347 1dr9_A B7-1 (CD80), T lymphocy 99.3 4.8E-12 1.6E-16 115.6 7.4 124 138-277 3-149 (201)
348 2ifg_A High affinity nerve gro 99.3 1E-12 3.5E-17 131.3 3.1 158 128-304 157-326 (347)
349 3sgj_C Human FCG3A receptor; r 99.3 2E-11 7E-16 111.9 11.6 148 129-305 7-155 (204)
350 1c5d_H Monoclonal antibody aga 99.3 8.4E-12 2.9E-16 115.5 9.1 70 141-212 134-209 (215)
351 2dm7_A KIAA1556 protein; beta- 99.3 6.8E-12 2.3E-16 102.2 7.5 86 128-220 7-95 (108)
352 3qib_D 2B4 beta chain; IG doma 99.3 7.4E-12 2.5E-16 120.2 9.0 181 21-209 3-245 (270)
353 2pet_A Lutheran blood group gl 99.3 5.2E-12 1.8E-16 117.9 7.6 132 135-277 6-162 (231)
354 2xqy_G A13-D6.3 monoclonal ant 99.3 7.8E-12 2.7E-16 119.4 8.9 68 141-211 141-217 (261)
355 2xot_A Amphoterin-induced prot 99.3 1.3E-11 4.6E-16 123.8 10.6 106 135-268 252-360 (361)
356 3q5y_A TCR N15 beta; IG, T cel 99.3 9E-12 3.1E-16 117.3 8.7 74 136-209 129-214 (240)
357 1hxm_B Gamma-delta T-cell rece 99.3 1.1E-11 3.8E-16 117.0 9.2 74 140-217 143-227 (242)
358 2r15_A Myomesin-1; sarcomeric 99.3 1.7E-12 5.8E-17 119.5 3.4 150 143-304 16-191 (212)
359 3nfj_J T cell receptor beta ch 99.3 2E-11 6.7E-16 115.4 10.8 72 137-210 132-221 (245)
360 1z9m_A GAPA225; nectin-like, I 99.2 1.1E-11 3.6E-16 107.1 7.9 89 133-224 42-143 (145)
361 1gsm_A Madcam-1, mucosal addre 99.2 1E-10 3.5E-15 106.5 14.7 119 12-211 57-197 (210)
362 3mj8_L Stimulatory hamster ant 99.2 9.3E-12 3.2E-16 114.8 7.7 132 133-277 5-158 (213)
363 2c1o_A IGK-C protein; FAB frag 99.2 6.2E-12 2.1E-16 119.5 6.7 138 129-278 38-199 (254)
364 2vol_A Murine IGG FC; FC, zinc 99.2 3.6E-12 1.2E-16 117.2 4.9 67 142-208 122-197 (207)
365 3sbw_C Programmed cell death 1 99.2 1.4E-11 4.8E-16 114.2 8.8 123 135-273 7-154 (222)
366 3qhz_H Human monoclonal antibo 99.2 8.8E-12 3E-16 116.8 7.1 76 139-217 142-227 (232)
367 1mq8_A ICAM-1, intercellular a 99.2 1.3E-11 4.5E-16 118.9 8.3 197 15-219 51-282 (291)
368 1za6_B IGG heavy chain; immuno 99.2 9.3E-12 3.2E-16 124.1 7.5 81 129-212 120-210 (344)
369 1f2q_A High affinity immunoglo 99.2 2.3E-11 7.9E-16 108.6 9.1 148 128-304 3-151 (176)
370 4f80_A Butyrophilin subfamily 99.2 9.1E-11 3.1E-15 109.3 13.5 125 136-277 11-161 (226)
371 3r06_A Anti-mouse CD3epsilon a 99.2 1.6E-11 5.4E-16 113.2 8.1 135 131-277 3-156 (213)
372 2eo1_A OBSCN protein, cDNA FLJ 99.2 1.9E-11 6.5E-16 98.4 7.5 79 137-221 19-100 (102)
373 3d9a_L Light chain of hyhel10 99.2 1.1E-11 3.7E-16 114.3 6.8 134 133-278 5-157 (213)
374 2wbj_D OB TCR; transmembrane, 99.2 4E-11 1.4E-15 115.8 10.8 71 139-210 160-247 (279)
375 1nkr_A P58-CL42 KIR; inhibitor 99.2 1.4E-11 4.9E-16 112.6 6.8 133 128-276 7-147 (201)
376 2zg1_A Sialic acid-binding IG- 99.2 1.2E-10 4.2E-15 107.2 12.8 126 135-275 6-167 (214)
377 2rgs_A I, IG gamma-2B heavy ch 99.2 8.1E-12 2.8E-16 115.9 4.7 67 142-208 130-205 (218)
378 2ny1_B T-cell surface glycopro 99.2 1.4E-11 4.6E-16 110.9 5.9 138 138-304 4-160 (184)
379 2id5_A Lingo-1, leucine rich r 99.2 3.3E-11 1.1E-15 125.9 9.6 87 132-218 388-476 (477)
380 3sob_L Antibody light chain; b 99.2 3E-11 1E-15 113.2 8.3 135 131-277 26-179 (237)
381 1lk3_L 9D7 light chain; antige 99.2 2.5E-11 8.7E-16 111.6 7.2 130 136-277 7-155 (210)
382 3s96_B 3B5H10 FAB light chain; 99.2 2.8E-11 9.7E-16 111.9 7.6 133 132-277 4-165 (218)
383 3tv3_H PGT128 heavy chain, IG 99.2 2.7E-11 9.1E-16 114.1 7.5 77 138-217 149-235 (239)
384 3zyj_A Leucine-rich repeat-con 99.2 5.8E-11 2E-15 122.6 10.7 94 129-223 341-437 (440)
385 3ry4_A Low affinity immunoglob 99.2 3.8E-11 1.3E-15 106.3 7.8 147 129-304 4-151 (170)
386 2qsq_A Carcinoembryonic antige 99.2 1.1E-10 3.9E-15 95.0 9.7 86 134-219 5-109 (111)
387 1oga_E TRBC1, T-cell receptor 99.2 1.3E-10 4.5E-15 110.3 11.5 73 137-210 131-220 (252)
388 3to4_D NKT vbeta2 (mouse varia 99.2 1.1E-10 3.8E-15 110.8 10.9 65 140-206 135-217 (253)
389 2x1w_L Vascular endothelial gr 99.2 3.8E-11 1.3E-15 110.8 7.2 156 136-305 14-189 (213)
390 1bec_A 14.3.D T cell antigen r 99.1 8.6E-11 2.9E-15 110.5 9.5 71 137-207 129-211 (238)
391 2dru_A Chimera of CD48 antigen 99.1 1.2E-10 4.3E-15 104.3 10.1 118 137-276 7-141 (180)
392 1moe_A Anti-CEA MAB T84.66; an 99.1 1E-10 3.5E-15 109.9 9.6 130 132-272 4-158 (240)
393 4dzb_B Vbeta2 (MAIT T cell rec 99.1 4.2E-11 1.4E-15 113.1 6.8 135 132-277 4-169 (246)
394 1f3r_B FV antibody fragment; I 99.1 1.9E-10 6.4E-15 109.5 11.0 133 137-272 8-176 (257)
395 4acp_A IG gamma-1 chain C regi 99.1 1.3E-10 4.6E-15 109.1 9.7 178 27-206 1-216 (240)
396 3pv7_A B7-H6, IG-like domain-c 99.1 7.5E-11 2.6E-15 111.5 8.1 125 135-275 9-160 (248)
397 3mjg_X Beta-type platelet-deri 99.1 1.1E-10 3.8E-15 112.9 9.5 145 139-304 105-259 (289)
398 1c1e_H Catalytic antibody 1E9 99.1 2.3E-10 7.8E-15 105.9 11.1 129 135-275 6-166 (219)
399 2ghw_B Anti-SARS SCFV antibody 99.1 1.8E-10 6E-15 108.9 10.5 133 137-272 10-172 (247)
400 3o3u_N Maltose-binding peripla 99.1 5.3E-11 1.8E-15 127.5 7.5 127 138-277 375-515 (581)
401 3n9g_H FAB fragment of MAB CR4 99.1 1.4E-10 4.8E-15 108.4 9.3 74 140-218 139-224 (230)
402 3u2s_H PG9 heavy chain; greek 99.1 1.1E-10 3.9E-15 110.4 8.7 85 130-217 142-236 (248)
403 3bkj_L WO2 IGG2A FAB fragment 99.1 8.8E-11 3E-15 111.4 7.5 136 130-277 35-194 (252)
404 1p6f_A NKP46, natural cytotoxi 99.1 6.6E-11 2.3E-15 111.5 6.5 162 128-305 6-170 (242)
405 3q0h_A T cell immunoreceptor w 99.1 4.2E-10 1.4E-14 93.0 10.5 88 136-223 10-112 (117)
406 3uto_A Twitchin; kinase, muscl 99.1 3.8E-10 1.3E-14 119.8 12.7 89 128-217 481-572 (573)
407 4frw_A Poliovirus receptor-rel 99.1 2.6E-10 9E-15 104.7 10.1 156 135-304 5-192 (218)
408 3r08_E T-cell surface glycopro 99.1 3.8E-11 1.3E-15 90.9 3.5 60 136-204 6-66 (82)
409 3mj6_A Junctional adhesion mol 99.1 3.1E-10 1.1E-14 108.5 10.7 124 130-273 6-159 (268)
410 3esu_F Antibody 14B7* light ch 99.1 2.4E-10 8.2E-15 108.1 9.7 89 131-219 6-111 (250)
411 1q0x_L FAB 9B1, light chain; a 99.1 8.9E-11 3.1E-15 108.1 6.3 129 136-276 7-158 (212)
412 3zyi_A Leucine-rich repeat-con 99.1 1.1E-10 3.9E-15 120.8 7.6 94 129-224 352-448 (452)
413 3auv_A SC-DSFV derived from th 99.1 1.3E-10 4.3E-15 112.0 7.4 91 130-220 13-120 (276)
414 3sob_H Antibody heavy chain, l 99.1 2.4E-10 8.1E-15 108.8 8.7 75 139-218 164-250 (256)
415 3b5h_A Cervical EMMPRIN, HAB18 99.1 3.6E-10 1.2E-14 101.4 9.4 110 139-271 8-120 (184)
416 2znx_A SCFV; fluorotryptohpan, 99.1 2.4E-10 8.3E-15 107.7 8.6 90 132-221 4-110 (242)
417 1eaj_A Coxsackie virus and ade 99.1 5.8E-10 2E-14 93.0 9.8 86 134-219 10-125 (126)
418 3tv3_L PGT128 light chain, IG 99.1 8.1E-11 2.8E-15 108.3 4.6 126 138-277 9-155 (211)
419 1pko_A Myelin oligodendrocyte 99.1 2.1E-09 7.3E-14 91.7 13.2 88 133-220 10-122 (139)
420 1sy6_A T-cell surface glycopro 99.0 1.3E-10 4.5E-15 106.5 5.8 138 141-304 15-184 (204)
421 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 2.7E-10 9.1E-15 108.4 8.2 89 131-219 5-116 (256)
422 2rgs_A I, IG gamma-2B heavy ch 99.0 1.5E-10 5.1E-15 107.3 6.2 134 128-276 8-160 (218)
423 2xzc_L FAB A.17 light chain; i 99.0 1.7E-10 5.7E-15 106.6 6.3 130 136-277 7-158 (216)
424 3omz_A Human vdelta1 gamma del 99.0 4.8E-10 1.6E-14 106.8 9.6 92 129-220 2-119 (259)
425 2p1y_A Bispecific alpha/beta T 99.0 3E-10 1E-14 106.6 8.0 128 133-273 4-165 (238)
426 4fmk_A Poliovirus receptor-rel 99.0 6.9E-10 2.3E-14 102.4 10.3 126 138-277 10-164 (225)
427 1qok_A MFE-23 recombinant anti 99.0 8.1E-10 2.8E-14 106.7 11.0 87 134-220 31-147 (282)
428 2w59_A IGY FCU3-4; immunoglobu 99.0 8.1E-11 2.8E-15 110.2 3.7 65 144-208 133-217 (231)
429 4i0k_A CD276 antigen; immunogl 99.0 6.9E-11 2.4E-15 109.6 3.2 122 138-273 4-149 (222)
430 3udw_C Poliovirus receptor; PV 99.0 1.3E-09 4.4E-14 89.8 10.7 83 137-220 8-117 (118)
431 3d9a_H Heavy chain of hyhel10 99.0 2.5E-10 8.6E-15 104.9 6.9 127 136-275 7-160 (210)
432 3bqu_C 3H6 FAB light chain; be 99.0 2.7E-11 9.2E-16 113.4 0.1 137 130-278 24-179 (233)
433 3nfj_J T cell receptor beta ch 99.0 3E-10 1E-14 107.1 7.4 88 132-219 4-116 (245)
434 3juy_B 3B3 single chain varian 99.0 9.2E-10 3.2E-14 104.6 10.7 93 128-220 5-134 (256)
435 1nfd_E H57 FAB; complex (immun 99.0 7.4E-11 2.5E-15 108.6 2.8 130 136-277 6-157 (212)
436 2vol_A Murine IGG FC; FC, zinc 99.0 1.6E-10 5.4E-15 106.1 5.0 75 133-209 6-94 (207)
437 1ypz_E T cell receptor delta, 99.0 8.5E-10 2.9E-14 101.3 9.8 62 147-209 135-199 (207)
438 1b6u_A KIR2DL3, P58 killer cel 99.0 7.3E-10 2.5E-14 105.2 9.6 133 128-276 6-146 (257)
439 3pl6_D MBP peptide / T-cell re 99.0 2.9E-10 1E-14 108.8 7.0 135 131-277 28-190 (268)
440 1op3_H FAB 2G12, heavy chain; 99.0 8.9E-10 3E-14 102.5 10.0 128 136-275 7-170 (225)
441 1xau_A B- and T-lymphocyte att 99.0 1.8E-09 6E-14 83.9 9.4 83 137-219 22-116 (122)
442 3gkz_A Anti-methamphetamine si 99.0 1.2E-09 4.1E-14 103.9 10.6 87 134-220 13-127 (257)
443 4ei6_B Vbeta16 XV19 type II na 99.0 5E-10 1.7E-14 105.6 7.9 87 132-219 5-116 (245)
444 3eow_R Poliovirus receptor; im 99.0 8.6E-11 2.9E-15 109.0 2.5 123 136-273 6-155 (221)
445 3khq_A B-cell antigen receptor 99.0 7.4E-10 2.5E-14 93.7 8.0 88 131-220 19-118 (133)
446 4hwn_A FC receptor-like A; FCR 99.0 9.6E-10 3.3E-14 89.3 8.4 85 129-220 8-100 (108)
447 1q9r_B S25-2 FAB (IGG1K) heavy 99.0 6.9E-10 2.4E-14 102.9 8.2 128 136-275 7-169 (222)
448 1l6x_A Immunoglobulin gamma-1 99.0 8.2E-10 2.8E-14 101.3 8.4 146 63-208 18-197 (207)
449 3uzq_A Anti-dengue MAB 4E11; d 99.0 8.6E-10 2.9E-14 104.6 8.7 87 133-219 5-117 (253)
450 1ypz_F T-cell receptor gamma c 99.0 7.3E-10 2.5E-14 103.5 7.7 66 140-209 141-217 (230)
451 1jhl_L IGG1-kappa D11.15 FV (l 99.0 2.7E-09 9.4E-14 86.6 10.1 74 133-206 5-94 (108)
452 3mlr_H Human monoclonal anti-H 99.0 8.6E-10 3E-14 102.7 8.1 68 141-213 141-220 (226)
453 1svz_A Immunoglobulin;, single 99.0 7.5E-10 2.6E-14 104.5 7.7 89 132-220 4-114 (247)
454 2j6e_L IGM, FAB light chain; a 99.0 2.8E-10 9.6E-15 106.4 4.5 129 136-276 26-178 (234)
455 1iam_A ICAM-1, CD54, intercell 99.0 2.1E-09 7.1E-14 95.7 9.6 77 131-208 88-167 (185)
456 3iu4_H CHP3 FAB heavy chain; a 98.9 7.5E-10 2.6E-14 105.7 6.9 71 141-216 139-221 (263)
457 1nqb_A Single-chain antibody f 98.9 2E-09 7E-14 102.3 9.9 123 135-272 6-163 (256)
458 3f8u_B Tapasin; endoplasmic re 98.9 5.8E-09 2E-13 103.6 13.3 37 12-48 252-289 (401)
459 3umt_A SCFV heavy chain and li 98.9 1.9E-09 6.5E-14 102.4 9.5 126 136-273 9-176 (256)
460 1pz5_B Heavy chain of FAB (SYA 98.9 2.5E-09 8.4E-14 99.0 10.0 128 136-275 7-167 (220)
461 3bae_H WO2 IGG2A FAB fragment 98.9 1.3E-09 4.5E-14 101.6 8.0 128 136-275 7-172 (228)
462 4gos_A V-SET domain-containing 98.9 4.1E-09 1.4E-13 88.0 10.0 82 136-217 12-118 (125)
463 3ux9_B SCFV antibody; five hel 98.9 1.3E-09 4.5E-14 103.5 7.7 86 136-221 9-115 (256)
464 2vsd_A CHIR AB1; immune system 98.9 6.1E-10 2.1E-14 90.0 4.5 86 129-218 5-95 (105)
465 1hxm_B Gamma-delta T-cell rece 98.9 1.5E-09 5E-14 102.3 7.8 132 132-274 4-173 (242)
466 1mju_H Immunoglobulin MS6-12; 98.9 1.4E-09 4.8E-14 101.3 7.5 129 135-275 6-163 (227)
467 2gjj_A A21 single-chain antibo 98.9 1.1E-09 3.9E-14 104.5 7.0 91 130-220 6-119 (264)
468 1dee_B IGM RF 2A2; FAB-IBP com 98.9 2.3E-09 7.7E-14 99.6 8.7 127 137-275 8-169 (223)
469 1xt5_A Variable region-contain 98.9 4.7E-09 1.6E-13 88.9 9.8 87 133-219 8-133 (135)
470 1ow0_A IG alpha-1 chain C regi 98.9 2.1E-10 7.1E-15 106.0 1.3 68 140-207 118-199 (214)
471 3q5y_A TCR N15 beta; IG, T cel 98.9 1.6E-09 5.5E-14 101.7 7.5 87 132-219 5-114 (240)
472 1c5d_H Monoclonal antibody aga 98.9 1.6E-09 5.3E-14 100.1 7.2 128 136-275 7-164 (215)
473 2wbj_D OB TCR; transmembrane, 98.9 8E-10 2.7E-14 106.5 5.4 133 130-276 25-193 (279)
474 3mtr_A N-CAM-1, NCAM-1, neural 98.9 5.9E-09 2E-13 96.0 10.9 75 144-219 126-209 (215)
475 3nl4_H Antigen binding fragmen 98.9 3.7E-09 1.3E-13 97.4 9.5 84 135-218 5-114 (215)
476 2w59_A IGY FCU3-4; immunoglobu 98.9 3.5E-10 1.2E-14 105.8 2.5 132 133-278 17-163 (231)
477 3qib_D 2B4 beta chain; IG doma 98.9 1.8E-09 6E-14 103.5 7.3 88 131-219 29-141 (270)
478 2xqy_G A13-D6.3 monoclonal ant 98.9 2.9E-09 9.9E-14 101.5 8.7 128 136-275 13-171 (261)
479 2fbj_H IGA-kappa J539 FAB (hea 98.9 1.2E-08 4.2E-13 94.4 12.6 128 136-276 7-166 (220)
480 1i1c_A IGG2A, IG gamma-2A chai 98.9 3.1E-09 1.1E-13 99.8 8.0 147 63-209 32-212 (239)
481 3to4_D NKT vbeta2 (mouse varia 98.9 2.8E-09 9.6E-14 101.0 7.6 85 135-219 7-116 (253)
482 3bn9_D E2 FAB heavy chain; ant 98.9 2.6E-09 8.8E-14 101.5 7.0 128 136-275 7-175 (257)
483 1x9q_A SCFV, 4M5.3 anti-fluore 98.8 2.8E-09 9.6E-14 102.0 6.7 92 129-220 15-128 (268)
484 1l6x_A Immunoglobulin gamma-1 98.8 3.9E-09 1.3E-13 96.7 7.4 68 142-209 16-94 (207)
485 2ptt_A CD48 antigen; CD244, CD 98.8 1.3E-08 4.5E-13 82.8 9.6 84 136-220 10-109 (110)
486 1h5b_A Murine T cell receptor 98.8 6.6E-09 2.2E-13 85.1 7.7 74 133-207 5-95 (113)
487 2aty_A Complement receptor chi 98.8 8.7E-09 3E-13 103.8 10.1 79 129-207 274-361 (376)
488 1mqk_L Antibody 7E2 FV fragmen 98.8 5.1E-09 1.8E-13 86.8 6.9 88 133-220 5-110 (120)
489 2d9c_A Signal-regulatory prote 98.8 1.7E-08 5.7E-13 85.7 10.3 94 132-225 11-127 (136)
490 1mq8_A ICAM-1, intercellular a 98.8 7.2E-09 2.5E-13 99.7 8.9 156 107-277 63-233 (291)
491 1bec_A 14.3.D T cell antigen r 98.8 3.9E-09 1.3E-13 99.0 6.7 129 134-277 4-165 (238)
492 1i1c_A IGG2A, IG gamma-2A chai 98.8 1.2E-09 4E-14 102.8 3.0 78 130-209 17-108 (239)
493 2edo_A CD48 antigen; beta-sand 98.8 6.1E-09 2.1E-13 86.4 6.5 90 137-226 12-117 (121)
494 3m8o_H Immunoglobulin A1 heavy 98.8 9.1E-09 3.1E-13 95.2 8.4 128 136-276 7-167 (221)
495 2aw2_A B and T lymphocyte atte 98.8 4.7E-08 1.6E-12 74.8 10.5 83 137-219 19-110 (120)
496 2or8_A Hepatitis A virus cellu 98.8 1.3E-08 4.5E-13 83.6 8.4 83 136-218 4-110 (116)
497 2q20_A VK1 O18/O8 germline lig 98.8 1.6E-08 5.5E-13 82.1 8.7 74 132-205 6-95 (109)
498 2oyp_A Hepatitis A virus cellu 98.8 9.3E-09 3.2E-13 83.4 7.1 81 138-218 3-107 (109)
499 1qfw_M FV, antibody (anti beta 98.8 1.9E-08 6.5E-13 81.5 8.9 73 133-205 5-93 (108)
500 3u1s_H FAB PGT145 heavy chain; 98.8 5.5E-09 1.9E-13 100.0 6.6 72 141-217 180-263 (267)
No 1
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii}
Probab=100.00 E-value=1.8e-61 Score=488.18 Aligned_cols=313 Identities=53% Similarity=0.745 Sum_probs=274.7
Q ss_pred eeecccceeEEEEeccCC-------CCCCCcccccchhhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccch
Q psy10160 243 YCQHHYYSQFCCESCTRA-------GQLPSYGPHIKRAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDPN 314 (558)
Q Consensus 243 ~~~~g~~~~~~c~~~~~~-------g~~~~~~~w~~~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~~ 314 (558)
+++.|.++.|+..++... ....+.+.-+.+.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.|+
T Consensus 154 hVn~gqSsND~~~Ta~~l~~~~~~~~~L~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~P~TlG~~~~~-~~~~l~rd 232 (482)
T 3gtd_A 154 HVNKGQSSNDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKSKDWDKIIKIGRTHLQDATPLTLKQEFSG-YITQIEYA 232 (482)
T ss_dssp CCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTGGGCEEEEEETTEEEEEEEHHHHHHH-HHHHHHHH
T ss_pred cCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeeccccCccCCCCcHHHHHHH-HHHHHHHH
Confidence 345566666665554320 01222333333333334444 8999999999999999999999998 99999999
Q ss_pred HHHHHhHhhhh---hhhc-CCCCC----hhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 315 DRQALNIVSIF---YFTY-LVKLS----ELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 315 ~~~l~~~~~~~---~~~g-~~g~~----~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
++||+++..++ +++| ++||. .+|++.+.+++++.|||+..+.+|++|++++||+++|++++|+.++.+|+||
T Consensus 233 ~~RL~~~~~~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~~e~~~~L~~la~~L~Ki 312 (482)
T 3gtd_A 233 LERIEDALKKVYLLAQGGTAVGTGINSKIGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKI 312 (482)
T ss_dssp HHHHHHHHTTTTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccCCCcCCchhHHHHHHHHHHHhCCCCccccchhhhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999877655 5566 45873 4577788999999999998789999999999999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLR 466 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (558)
|+||++|+||||+||||+.+|++++|||||||||||+.+|.++++|++++|++.++++....++||+|++.|++.|++|+
T Consensus 313 a~DlrllsSgpr~g~gEi~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~pl~~~~~l~ 392 (482)
T 3gtd_A 313 ANDIRLLGSGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELNVFKPVIIYNILQ 392 (482)
T ss_dssp HHHHHHHTCCSSSSCCCEECCCCSCCCSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCBTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCccCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHh
Q psy10160 467 SIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEEFN 546 (558)
Q Consensus 467 ~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~~~ 546 (558)
++.++.++++.++.+|+++|+||++||+++++++++++|+|++++||+.|++++++|.++|++++|++.+.+.|++++++
T Consensus 393 s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lvTaLa~~iGy~~a~~ia~~A~~~g~~l~e~~~~~~~ls~eeld 472 (482)
T 3gtd_A 393 SIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFD 472 (482)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEECHHHHHHHHHHCGGGHHHHHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhhhHHHHHhhhHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccC
Q psy10160 547 KWVVPEDMLG 556 (558)
Q Consensus 547 ~~~~p~~~~~ 556 (558)
++|||+.|+|
T Consensus 473 ~~ldP~~~~g 482 (482)
T 3gtd_A 473 KIVVPEKMIS 482 (482)
T ss_dssp HHHSCC----
T ss_pred HHcCHHHhcC
Confidence 9999999986
No 2
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.6e-61 Score=488.65 Aligned_cols=315 Identities=58% Similarity=0.833 Sum_probs=273.9
Q ss_pred eeecccceeEEEEeccCC-------CCCCCcccccchhhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccch
Q psy10160 243 YCQHHYYSQFCCESCTRA-------GQLPSYGPHIKRAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDPN 314 (558)
Q Consensus 243 ~~~~g~~~~~~c~~~~~~-------g~~~~~~~w~~~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~~ 314 (558)
+++.|.++.|+..++... ....+.+.-+.+.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.|+
T Consensus 160 hVn~gqSsND~~~Ta~~l~~~~~~~~~L~~~L~~L~~aL~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~-~a~~l~rd 238 (490)
T 3e04_A 160 HVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSG-YVQQVKYA 238 (490)
T ss_dssp CCTTTCCHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHHHH
T ss_pred ccCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCceeeccccCccCCCCcHHHHHHH-HHHHHHHH
Confidence 344555666555554320 01222333333333334444 8899999999999999999999998 99999999
Q ss_pred HHHHHhHhhhh---hhhc-CCCCC----hhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 315 DRQALNIVSIF---YFTY-LVKLS----ELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 315 ~~~l~~~~~~~---~~~g-~~g~~----~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
++||+++..++ +++| ++||+ .+|++.+.+++++.|||+..+.+|++||+++||+++|++++|+.++.+|+||
T Consensus 239 ~~RL~~~~~~l~~~~lGgtAvGTg~~~~~~~~~~v~~~la~~lGl~~~~~~n~~da~~~rD~~ve~~~~L~~la~~L~Ki 318 (490)
T 3e04_A 239 MTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKI 318 (490)
T ss_dssp HHHHHHTCTTTSEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCccccCCCcCChhHHHHHHHHHHHHhCCCCcCCCCHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999877555 5566 45873 4677789999999999998789999999999999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLR 466 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (558)
|+||++|+||||+||||+.+|+.++|||||||||||+.+|.+++.|++++|++.++.+....++||++++.|++.+++|+
T Consensus 319 a~DlrllsSgpr~g~gEi~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~ai~~a~~~g~~eln~~~p~~~~~ll~ 398 (490)
T 3e04_A 319 ANDIRFLGSGPRSGLGELILPENEPGSSIMPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLH 398 (490)
T ss_dssp HHHHHHHTCCSSSSCCCEECCCCSCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHh
Q psy10160 467 SIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEEFN 546 (558)
Q Consensus 467 ~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~~~ 546 (558)
++.++.++++.++.+|+++|+||++||+++++++++++|+|++++||+.|++++++|.++|++++|++.+.+.|++++++
T Consensus 399 s~~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lvTaLa~~iGy~~a~~iak~A~~~g~~l~e~~~~~~~ls~eeld 478 (490)
T 3e04_A 399 SARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFD 478 (490)
T ss_dssp HHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHHTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCEECHHHHHHHHhhchHHHHHhhhHHHHHHHHHHHHHHHHHCCCHHHHHHHcCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcccccCCC
Q psy10160 547 KWVVPEDMLGPK 558 (558)
Q Consensus 547 ~~~~p~~~~~~~ 558 (558)
++|||+.|+|++
T Consensus 479 ~~ldP~~~~g~~ 490 (490)
T 3e04_A 479 EWVKPKDMLGPK 490 (490)
T ss_dssp HHCCGGGSSCC-
T ss_pred HHcCHHHhcCCC
Confidence 999999999974
No 3
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A
Probab=100.00 E-value=3.4e-60 Score=482.91 Aligned_cols=310 Identities=37% Similarity=0.549 Sum_probs=266.6
Q ss_pred ccceeEEEEeccCCCCCCCcc--------cccchhhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccchHHH
Q psy10160 247 HYYSQFCCESCTRAGQLPSYG--------PHIKRAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDPNDRQ 317 (558)
Q Consensus 247 g~~~~~~c~~~~~~g~~~~~~--------~w~~~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~~~~~ 317 (558)
|.+++|+..++.. ......+ .-+.+.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.|+++|
T Consensus 158 g~SsNDv~~Ta~~-L~lr~~l~~~l~~~L~~L~~~L~~kA~e~~d~v~~GrTHlQ~A~PiT~G~~~~~-~a~~l~rd~~R 235 (495)
T 4adm_A 158 SQSSNDTFPTATH-IAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSG-YARQIEAGIER 235 (495)
T ss_dssp TCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHHHHHHH
T ss_pred CCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcccccchHHHHHHH-HHHHHHHHHHH
Confidence 6677777666544 2222222 2222222233334 8899999999999999999999998 99999999999
Q ss_pred HHhHhhh---hhhhc-CCCCCh----hHHHHHHHHHHhHhCC-CcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhh
Q psy10160 318 ALNIVSI---FYFTY-LVKLSE----LLETKCAAKIAELTGL-PFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAN 388 (558)
Q Consensus 318 l~~~~~~---~~~~g-~~g~~~----~~~~~~~~~~a~~lg~-~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~ 388 (558)
|+++..+ +++|| |+||+. .|+..+.+++++.||| +..+.+|++||+++||+++|++++|+.++.+|+|||+
T Consensus 236 L~~~~~~l~~~~LGgtAvGT~~~~~~~~~~~v~~~la~~lG~~~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~ 315 (495)
T 4adm_A 236 VRACLPRLGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIAN 315 (495)
T ss_dssp HHHHHHHHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHCCTTCEECSCTTHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeeecCCccCChhHHHHHHHHHHHHhCCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9877654 45666 678853 5666788999999999 6788999999999999999999999999999999999
Q ss_pred hhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHHHH
Q psy10160 389 DIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLRSI 468 (558)
Q Consensus 389 d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (558)
||++|+||||+|||||.+|+.++|||||||||||+.+|.++++|++++|++.+++..+.+++|+++.+.+.+.+++++++
T Consensus 316 DlrllsSgpr~e~gei~lp~~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~s~ 395 (495)
T 4adm_A 316 DIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESF 395 (495)
T ss_dssp HHHHHTCBSTTSCCCEECCCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCcceEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcChHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999998899999999
Q ss_pred HHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCC----CCHHH
Q psy10160 469 RLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGY----LTEEE 544 (558)
Q Consensus 469 ~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~----l~~~~ 544 (558)
..+.+++..++..|+++|+||++||+++++.+++++|+|++++||+.|+++|++|.++|++++|++.+.+. |+++|
T Consensus 396 ~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~s~~l~t~La~~igy~~a~~ia~~a~~~g~~l~e~~~~~~~~~~~ls~ee 475 (495)
T 4adm_A 396 KLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIED 475 (495)
T ss_dssp HHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCGGGGGGGHHHHCHHHHHHHHHHHHHHTCCHHHHHHHTTCCBTTBCHHH
T ss_pred HHHHHHHHHHHHHHHccCEECHHHHHHHHhccccHHHHhhhhhhHHHHHHHHHHHHHhCCCHHHHHHhCcccccCCCHHH
Confidence 99999999988889999999999999999999999999999999999999999999999999999998765 99999
Q ss_pred HhhhcCcccccCCC
Q psy10160 545 FNKWVVPEDMLGPK 558 (558)
Q Consensus 545 ~~~~~~p~~~~~~~ 558 (558)
++++|||+.|+|+.
T Consensus 476 l~~~ldp~~~~~~~ 489 (495)
T 4adm_A 476 LDRRLDVLAMAKAE 489 (495)
T ss_dssp HHHHTCHHHHTTCC
T ss_pred HHHHcCHHHhcCCc
Confidence 99999999999873
No 4
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1
Probab=100.00 E-value=4.4e-59 Score=475.58 Aligned_cols=315 Identities=52% Similarity=0.765 Sum_probs=278.0
Q ss_pred eeeecccceeEEEEeccCCCCCCCccc-ccc-------hhhhhhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 242 RYCQHHYYSQFCCESCTRAGQLPSYGP-HIK-------RAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 242 ~~~~~g~~~~~~c~~~~~~g~~~~~~~-w~~-------~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
.++|.|.+++|+..++.. ......+. .+. +.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 157 d~Vn~g~SsNDv~~Ta~~-L~lr~~l~~~l~~~L~~L~~~L~~~A~e~~~~v~~GrTHlQ~A~PiT~G~~~~~-~~~~l~ 234 (488)
T 1yfm_A 157 NHCNQSQSSNDTFPTVMH-IAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSG-YVQQVE 234 (488)
T ss_dssp CCCTTTCCHHHHHHHHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cCcCCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeceecCccceEeeHHHHHHH-HHHHHH
Confidence 344577778777776654 33333332 222 222223334 8899999999999999999999998 999999
Q ss_pred chHHHHHhHhhh---hhhhc-CCCCChh----HHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIVSI---FYFTY-LVKLSEL----LETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLM 384 (558)
Q Consensus 313 ~~~~~l~~~~~~---~~~~g-~~g~~~~----~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~ 384 (558)
|+++||+++..+ +++|| |+||+.. |++.+.+++|+.|||++.+.+|++|++++||+++|++++|+.++.+|+
T Consensus 235 rd~~RL~~~~~~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~ 314 (488)
T 1yfm_A 235 NGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLKFQTAPNRFEALAAHDAIVECSGALNTLACSLF 314 (488)
T ss_dssp HHHHHHHHHHHHHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHSSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCccccCCccCChhHHHHHHHHHHHHhCCCCccCccHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999999877655 45566 6787654 455788999999999988899999999999999999999999999999
Q ss_pred HHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHH
Q psy10160 385 KIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNV 464 (558)
Q Consensus 385 k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (558)
|||+||++|+||||+|||||.+|++++|||||||||||+.+|.++++|++++|++.+++..+.++++|++...+.+.+++
T Consensus 315 Kia~DlrllsS~pr~g~gei~lp~~~~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~~~~~l 394 (488)
T 1yfm_A 315 KIAQDIRYLGSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANL 394 (488)
T ss_dssp HHHHHHHHHTCCSSSSCCCEECCCCSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCBTTBCSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCCceeEECCCCCCcCCCcccccCcHHHHHHHHHHHHHHhHHHHHHHHHhcccchhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888889999999999988999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEE 544 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~ 544 (558)
++++..+.+++..+..+++++|+||++||+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|+++|
T Consensus 395 ~~s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l~t~La~~lg~~~a~~i~~~a~~~g~~l~e~~~~~~~l~~ee 474 (488)
T 1yfm_A 395 LNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKE 474 (488)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGGTTTGGGTCHHHHHHHHHHHHHHTCCHHHHHHHTTSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHccCchHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHH
Confidence 99999999999888788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCcccccCCC
Q psy10160 545 FNKWVVPEDMLGPK 558 (558)
Q Consensus 545 ~~~~~~p~~~~~~~ 558 (558)
++++|||+.|+|++
T Consensus 475 l~~~ldp~~~~~~~ 488 (488)
T 1yfm_A 475 FDEWVVPEHMLGPK 488 (488)
T ss_dssp HHHHCCGGGCC---
T ss_pred HHHhcCHHHhcCCC
Confidence 99999999999874
No 5
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A
Probab=100.00 E-value=2.8e-59 Score=474.22 Aligned_cols=307 Identities=34% Similarity=0.506 Sum_probs=267.8
Q ss_pred ecccceeEEEEeccCCCCCCCccc-------ccchhhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccchHH
Q psy10160 245 QHHYYSQFCCESCTRAGQLPSYGP-------HIKRAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDPNDR 316 (558)
Q Consensus 245 ~~g~~~~~~c~~~~~~g~~~~~~~-------w~~~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~~~~ 316 (558)
+.|.+++|+..++.. ......+. -+.+.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.|+++
T Consensus 156 n~g~SsNDv~~Ta~~-L~~~~~l~~L~~~L~~L~~~L~~kA~e~~d~v~~GRTHlQ~A~PiTlG~~~~~-~a~~l~rd~~ 233 (478)
T 3ocf_A 156 NMSQSTNDVYPTAVR-LALLLSQNQVQTALHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQEFEA-FAATLREDTA 233 (478)
T ss_dssp TTTCCHHHHHHHHHH-HHHHHTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHHHHHH
T ss_pred CCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeecccccccceeecHHHHHHH-HHHHHHHHHH
Confidence 366667766665543 22222222 222223333334 8899999999999999999999998 9999999999
Q ss_pred HHHhHhhhh---hhhc-CCCCCh----hHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhh
Q psy10160 317 QALNIVSIF---YFTY-LVKLSE----LLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAN 388 (558)
Q Consensus 317 ~l~~~~~~~---~~~g-~~g~~~----~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~ 388 (558)
||+++..++ +++| |+||+. .|+..+.+++++.|||++.+.+|++|++++||+++|++++|+.++.+|+|||+
T Consensus 234 RL~~~~~~l~~~~lGgtAvGTg~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~ 313 (478)
T 3ocf_A 234 RLEEVAALFREVNLGGTAIGTRINASHAYAEQAIVELSQISGIELKATGNLVEASWDTGAFVTFSGILRRIAVKLSKIAN 313 (478)
T ss_dssp HHHHHHHGGGEECTTC-----------CHHHHHHHHHHHHHTSCCEECSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHhCCCCeeeCCCcCCChhHHHHHHHHHHHhcCCCCccCCChhhhhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999877555 5666 677743 34457889999999999888999999999999999999999999999999999
Q ss_pred hhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHHHH
Q psy10160 389 DIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLRSI 468 (558)
Q Consensus 389 d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (558)
||++|+||||+|||||.+|+.++|||||||||||+.+|.++++|++++|++.+++..+.+++||++.+.+.+.+++++++
T Consensus 314 DlrllsSgpr~g~gEi~lp~~q~GSSiMP~K~NPv~~E~i~~~a~~V~G~~~~i~~a~~~g~leln~~~p~i~~~l~~s~ 393 (478)
T 3ocf_A 314 DLRLLSSGPRSGLGEIRLPAVQPGSSIMPGKVNPVIPESVNQVCYQVIGNDLTVTMAAESGQLQLNAFEPLIVYNILSSM 393 (478)
T ss_dssp HHHHHTCBSSSSCCCEECCCCSCCBTTBTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCceeEEECCCCCCcCCCCCcccCcHHHHHHHHHHHHHHhHHHHHHHHHhcCcchhcccchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988888999999999998899999999
Q ss_pred HHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHhhh
Q psy10160 469 RLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEEFNKW 548 (558)
Q Consensus 469 ~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~~~~~ 548 (558)
.++.+++..+...|+++|+||+|||+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+. ++++++++
T Consensus 394 ~ll~~~~~~~~~~~v~gl~vn~erm~~~l~~s~~lvtaLa~~igy~~a~~ia~~A~~~g~~l~e~~~~~~~-s~eel~~~ 472 (478)
T 3ocf_A 394 RLLGRAMTNLAERCVDGIEANVERCRAGAEESISLATALVPVVGYARAAEIAKQALASGQTVMEVAISKGL-DASALTIM 472 (478)
T ss_dssp HHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCGGGGGGGHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTC-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEECHHHHHHHHHhCccHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCC-CHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999886 99999999
Q ss_pred cCcccc
Q psy10160 549 VVPEDM 554 (558)
Q Consensus 549 ~~p~~~ 554 (558)
|||+++
T Consensus 473 ldp~~m 478 (478)
T 3ocf_A 473 LDPLRM 478 (478)
T ss_dssp TCSCC-
T ss_pred cCcccC
Confidence 999874
No 6
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A
Probab=100.00 E-value=2.2e-59 Score=476.17 Aligned_cols=313 Identities=33% Similarity=0.513 Sum_probs=275.9
Q ss_pred eeecccceeEEEEeccCCCCCCCcccccch-------hhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccch
Q psy10160 243 YCQHHYYSQFCCESCTRAGQLPSYGPHIKR-------AVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDPN 314 (558)
Q Consensus 243 ~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~-------~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~~ 314 (558)
++++|.+++|+..++.. ......+..+.. .+.....+ ++++|.||||+|+|+|+|+||++++ |++.|.|+
T Consensus 134 hVn~g~SsnDv~~Ta~~-L~~r~~l~~l~~~L~~L~~~L~~~A~~~~~~v~~GrTHlQ~A~PiT~G~~~~~-~~~~l~rd 211 (468)
T 3r6q_A 134 HVNMSQSTNDAFPTATH-IAVLSLLNQLIETTKYMQQEFMKKADEFAGVIKMGRTHLQDAVPILLGQEFEA-YARVIARD 211 (468)
T ss_dssp CCTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHHHH
T ss_pred CCCCCCChHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEEecCcCCccceeccHHHHHHH-HHHHHHHH
Confidence 34467777777776654 233333222222 22223333 8899999999999999999999998 99999999
Q ss_pred HHHHHhHhhh---hhhhc-CCCCCh----hHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 315 DRQALNIVSI---FYFTY-LVKLSE----LLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 315 ~~~l~~~~~~---~~~~g-~~g~~~----~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
++||+++..+ ++++| |+||+. .|+..+.+++++.|||+..+.+|++||+++||+++|++++|+.++.+|+||
T Consensus 212 ~~RL~~~~~~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~lGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L~Ki 291 (468)
T 3r6q_A 212 IERIANTRNNLYDINMGATAVGTGLNADPEYISIVTEHLAKFSGHPLRSAQHLVDATQNTDCYTEVSSALKVCMINMSKI 291 (468)
T ss_dssp HHHHHHTHHHHTEECTTCTTTSSCTTCCHHHHHHHHHHHHHHHCSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCeecCCCCCCChHHHHHHHHHHHHHhCCCCccccchHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999877644 56666 678754 345578899999999998788999999999999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLR 466 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (558)
|+||++|+||||+|||||.+|+.++|||||||||||+.+|.++++|++++|++.+++..+..++||++.+.+.+..++++
T Consensus 292 a~DlrllsS~pr~g~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~G~~~~i~~a~~~g~~eln~~~p~i~~~l~~ 371 (468)
T 3r6q_A 292 ANDLRLMASGPRAGLSEIVLPARQPGSSIMPGKVNPVMPEVMNQVAFQVFGNDLTITSASEAGQFELNVMEPVLFFNLIQ 371 (468)
T ss_dssp HHHHHHHHCBSSSSCCCEECCCCSCCCTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCeeEEECCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHcCchhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888999999998888888999
Q ss_pred HHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHh
Q psy10160 467 SIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEEFN 546 (558)
Q Consensus 467 ~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~~~ 546 (558)
++..+.+++..+.++|+++|+||++||+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|++++++
T Consensus 372 s~~~l~~~l~~~~~~~i~gl~vn~erm~~~l~~s~~l~t~La~~lgy~~a~~ia~~a~~~g~~l~e~~~~~~~ls~eel~ 451 (468)
T 3r6q_A 372 SISIMTNVFKSFTENCLKGIKANEERMKEYVEKSIGIITAINPHVGYETAAKLAREAYLTGESIRELCIKYGVLTEEQLN 451 (468)
T ss_dssp HHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCCSHHHHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCEECHHHHHHHHHcCCchHHhcchhhHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHHHHH
Confidence 99999999988887899999999999999999999999999999999999999999999999999999998899999999
Q ss_pred hhcCcccccCC
Q psy10160 547 KWVVPEDMLGP 557 (558)
Q Consensus 547 ~~~~p~~~~~~ 557 (558)
++|||+.|+++
T Consensus 452 ~~ldp~~~~~~ 462 (468)
T 3r6q_A 452 EILNPYEMIHP 462 (468)
T ss_dssp HHSCHHHHTSC
T ss_pred HHcCHHHhcCC
Confidence 99999999986
No 7
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A
Probab=100.00 E-value=1.5e-58 Score=472.04 Aligned_cols=315 Identities=49% Similarity=0.744 Sum_probs=278.5
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccc-cch-------hhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPH-IKR-------AVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w-~~~-------~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
..++|.|.+++|+..++.. ...+..+.. +.. .+.....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 131 ~~~Vn~g~SsnD~~~Ta~~-L~lr~~l~~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l 208 (467)
T 1fur_A 131 NDDVNKSQSSNDVFPTAMH-VAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTNLQDATPLTLGQEISG-WVAML 208 (467)
T ss_dssp CCCCTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred hhhcccCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceeeeHHHHHHH-HHHHH
Confidence 3445688888888777755 333333322 222 22223333 8899999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhh---hhhc-CCCCChh----HHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIF---YFTY-LVKLSEL----LETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSL 383 (558)
Q Consensus 312 ~~~~~~l~~~~~~~---~~~g-~~g~~~~----~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l 383 (558)
.|+++||+++..++ ++|| |+||+.. |++.+.+++|+.|||+..+.+|++||+++||+++|++++|+.++++|
T Consensus 209 ~r~~~rL~~~~~~l~~~~lGgtAvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L 288 (467)
T 1fur_A 209 EHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASL 288 (467)
T ss_dssp HHHHHHHHHHHHHHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCcCcchhcCCccCChhHHHHHHHHHHHHhCCCCccCCCHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999877554 5556 7888643 55688999999999998899999999999999999999999999999
Q ss_pred HHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHH
Q psy10160 384 MKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSN 463 (558)
Q Consensus 384 ~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (558)
+|||+||++|+||||+||||+.+|++++|||||||||||+.+|.++++|++++|++.+++...+.+++|++.+.|...+.
T Consensus 289 ~kia~Dl~ll~S~~r~~~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~ 368 (467)
T 1fur_A 289 MKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHN 368 (467)
T ss_dssp HHHHHHHHHHTCCSSSSCCSEECCCCSCCCTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHhCCCccCceeEECCCCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHH
Q psy10160 464 VLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEE 543 (558)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~ 543 (558)
+++++..+.+++..+..+++++|+||++||+++++.+++++|+|++++||+.|++++++|.++|++++|++.+...|+++
T Consensus 369 l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~~~~a~~~g~~l~e~~~~~~~l~~~ 448 (467)
T 1fur_A 369 FLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEA 448 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSTTHHHHHTTSCHHHHHHHHHHHHHHTCCHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHHHhCccHHHHhHhhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHH
Confidence 99999999999988878899999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhhhcCcccccCC
Q psy10160 544 EFNKWVVPEDMLGP 557 (558)
Q Consensus 544 ~~~~~~~p~~~~~~ 557 (558)
+++++|||+.|+++
T Consensus 449 e~~~~ldp~~~~~~ 462 (467)
T 1fur_A 449 EFDSWVRPEQMVGS 462 (467)
T ss_dssp HHHHHCCGGGC---
T ss_pred HHHHhcCHHHHhCc
Confidence 99999999999986
No 8
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.9e-58 Score=471.62 Aligned_cols=316 Identities=50% Similarity=0.713 Sum_probs=277.4
Q ss_pred ceeeecccceeEEEEeccCCCCC--------CCcccccchhhhhhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQL--------PSYGPHIKRAVEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~--------~~~~~w~~~~l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
..++|.|.+++|+..++.. ... .+.+.-+.+.+.....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 163 nd~Vh~gqSsnDv~~TA~~-l~~~~~~~~~L~~~L~~L~~~L~~kA~~~~~~~~~GRTHlQ~A~P~TlG~~~~~-~~~~l 240 (495)
T 4hgv_A 163 NDHVNMSQSSNDTYPTAMH-IACAERVIHDLLPALKHLHKALEEKVKAFDHIIKIGRTHTQDATPLTLGQEFSG-YAAQV 240 (495)
T ss_dssp CCCCTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred HHhccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccCCCCceeecHHHHHHH-HHHHH
Confidence 4567888888888877743 111 12222223333333344 8999999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhh---hhhc-CCCCCh----hHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIF---YFTY-LVKLSE----LLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSL 383 (558)
Q Consensus 312 ~~~~~~l~~~~~~~---~~~g-~~g~~~----~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l 383 (558)
.|+++||+++..++ .++| ++|++. ++...+.+++++.+||.+.+.+|+++|+++||+++|++++|+.++.+|
T Consensus 241 ~r~~~RL~~~~~~~~~~~lGgtAvGtg~~~~~~~~~~v~~~la~~~gl~f~~a~n~~~~~~~rD~~~e~~~~L~~la~~L 320 (495)
T 4hgv_A 241 ASSIKRIEMTLPGLCELAQGGTAVGTGLNAPVGFAEKVAEEIAAITGIGFTSAPNKFEALAAHDSMVFSHGAINATAAAL 320 (495)
T ss_dssp HHHHHHHHHTHHHHTEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHTSCCEECSCHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCcchhhhcccCchhHHHHHHHHHHHHhCCCccccCCHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999998776554 4455 566543 455577889999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHH
Q psy10160 384 MKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSN 463 (558)
Q Consensus 384 ~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (558)
+|||+||++|+|||+.||+|+.+|++++|||||||||||+.+|.++++|++++|+..++......+++|+|.+.|.++|.
T Consensus 321 ~Kia~Dirll~S~~~~g~~Ei~~p~~q~GSSiMP~K~NPv~~E~i~~~a~~v~G~~~~i~~a~~~~~~e~n~~~~~~~~~ 400 (495)
T 4hgv_A 321 FKIANDIRFLGSGPRSGLGELSLPENEPGSSIMPGKVNPTQCEALTQVCVQVFGNHAALTFAGSQGHFELNVYNPLMAYN 400 (495)
T ss_dssp HHHHHHHHHHTCCSSSSCCCEECCCCSCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCcceeeeEEecCcCCcccccCccccChHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHH
Q psy10160 464 VLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEE 543 (558)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~ 543 (558)
+|+++.++.++++.++.+|+++|+||++||+++++.+++++|+|++.+||+.|++++++|.++|++++|++.+.+.|+++
T Consensus 401 ll~s~~~l~~~~~~~~~~~i~gl~vn~erm~~~l~~s~~lvtaL~~~iGy~~A~~iak~A~~~g~~lre~~~~~~~ls~e 480 (495)
T 4hgv_A 401 FLQSVQLLADAAISFTDNCVVGIEAREDNIKAALDRSLMLVTALAPKIGYDNAAKIAKTAHKNGTTLREEAVGGGYVTDE 480 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHHHCSGGGGGTHHHHCHHHHHHHHHHHHHHTCCHHHHHHTTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCEECHHHHHHHHhcChhHHHHhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCcccccCCC
Q psy10160 544 EFNKWVVPEDMLGPK 558 (558)
Q Consensus 544 ~~~~~~~p~~~~~~~ 558 (558)
|++++|||++|+|++
T Consensus 481 eld~lldP~~~~gpA 495 (495)
T 4hgv_A 481 EFDAVVRPETMIGPA 495 (495)
T ss_dssp HHHHHCCGGGSSSCC
T ss_pred HHHHhCCHHHhcCCC
Confidence 999999999999984
No 9
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=2.9e-58 Score=472.03 Aligned_cols=314 Identities=29% Similarity=0.446 Sum_probs=273.9
Q ss_pred eeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhcccccccccc
Q psy10160 242 RYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLDP 313 (558)
Q Consensus 242 ~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~~ 313 (558)
.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.|
T Consensus 136 d~Vn~g~SsnDv~~Ta~~-L~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l~r 213 (478)
T 1jsw_A 136 DHVNKCQSTNDAYPTGFR-IAVYSSLIKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRA-FSILLKE 213 (478)
T ss_dssp CCCSCSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCEEECCGGGSCCCEEEHHHHHHH-HHHHHHH
T ss_pred ccccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccccCccceeehHHHHHHH-HHHHHHH
Confidence 355678888888777755 333333332332222 22233 8899999999999999999999998 9999999
Q ss_pred hHHHHHhHhhh---hhhhc-CCCCChhH----HHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHH
Q psy10160 314 NDRQALNIVSI---FYFTY-LVKLSELL----ETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMK 385 (558)
Q Consensus 314 ~~~~l~~~~~~---~~~~g-~~g~~~~~----~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k 385 (558)
+++||+++..+ ++++| |+||+..+ ++.+.+++++.|||++.+.+|++|++++||+++|++++|+.++++|+|
T Consensus 214 d~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LGl~~~~~~n~~da~~~rD~~~e~~~~l~~la~~L~k 293 (478)
T 1jsw_A 214 EVKNIQRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGAYVMVHGALKRLAVKMSK 293 (478)
T ss_dssp HHHHHHHHHHHTTEECCSCCSSSSCSSCTTTHHHHHHHHHHHHHCCCCEECSCSSSBTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccccCCccCCcchHHHHHHHHHHHcCCCCCcCCCHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999987754 45566 66887544 457889999999999889999999999999999999999999999999
Q ss_pred HhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHH
Q psy10160 386 IANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVL 465 (558)
Q Consensus 386 ~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (558)
||+||++|+||||+|||||.+|++++|||||||||||+.+|+++++|++++|++.+++..++++++|++...+...++++
T Consensus 294 ia~Dl~ll~S~pr~e~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~e~~~~~p~~~~~l~ 373 (478)
T 1jsw_A 294 ICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEVVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMF 373 (478)
T ss_dssp HHHHHHHHHCSTTTSCCCEECCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCBTTBCTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCccCceeEECCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhHHHHHHHHHhccchhhcccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999888889999
Q ss_pred HHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHH
Q psy10160 466 RSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEEEF 545 (558)
Q Consensus 466 ~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~~~ 545 (558)
+++..+..++..+..+++++|+||++||+++++.+++++|+|++++||+.|+++++.|.++|++++|++.+.+.|+++++
T Consensus 374 ~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~~~ 453 (478)
T 1jsw_A 374 ESVHILTNACYNLLEKCINGITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTEAEL 453 (478)
T ss_dssp HHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCTTCGGGTHHHHCHHHHHHHHHHHHTTCCCHHHHHHHHTSSCSHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCeecHHHHHHHHHhCchHHHHHHHhhhHHHHHHHHHHHHHhCCCHHHHHHhcCCCCHHHH
Confidence 99999999988877789999999999999999999999999999999999999999999999999999998888999999
Q ss_pred hhhcCcccccCC
Q psy10160 546 NKWVVPEDMLGP 557 (558)
Q Consensus 546 ~~~~~p~~~~~~ 557 (558)
+++|||+.|+++
T Consensus 454 ~~~ldp~~~~~~ 465 (478)
T 1jsw_A 454 DDIFSVQNLMHP 465 (478)
T ss_dssp HTSCCC------
T ss_pred HHhCCHHHHhCC
Confidence 999999999986
No 10
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1
Probab=100.00 E-value=6.8e-58 Score=467.80 Aligned_cols=316 Identities=44% Similarity=0.588 Sum_probs=278.0
Q ss_pred ceeeecccceeEEEEeccCCCCCCCccc-ccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGP-HIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~-w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
..++|.|.+++|+..++.. ...+..+. .+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 131 ~~~Vn~g~SsnD~~~Ta~~-L~lr~~l~~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l 208 (466)
T 1vdk_A 131 NDHVNRGQSSNDTFPTAMY-VAVALALHQRLYPAVEGLIRTFTAKAQAFDQIVKVGRTHLMDAVPITLGQEIGS-WAAQL 208 (466)
T ss_dssp CCCCTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred ccCcCCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCCcccHHHHHHH-HHHHH
Confidence 3445588888888877765 34444443 3333222 22233 8899999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhh---hhhc-CCCCChhH----HHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIF---YFTY-LVKLSELL----ETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSL 383 (558)
Q Consensus 312 ~~~~~~l~~~~~~~---~~~g-~~g~~~~~----~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l 383 (558)
.|+++||++++.++ +++| |+||+..+ ++.+.+++|+.|||+..+.+|++|++++||+++|++++|+.++++|
T Consensus 209 ~r~~~RL~~~~~~~~~~~lGg~AvGT~~~~~~~~~~~v~~~la~~LG~~~~~~~n~~~a~~~rD~~~e~~~~l~~la~~L 288 (466)
T 1vdk_A 209 KTTLAAVKEMEKGLYNLAIGGTAVGTGLNAHPRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGAL 288 (466)
T ss_dssp HHHHHHHHHHHGGGGEECTTCTTTSSCTTSCTTHHHHHHHHHHHHHSSCCEECSCTTHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCccccCCCccCCchHHHHHHHHHHHHcCCCCCCCcchHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999876655 4556 67886654 4578899999999998889999999999999999999999999999
Q ss_pred HHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHH
Q psy10160 384 MKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSN 463 (558)
Q Consensus 384 ~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (558)
+|||+||++|+||||+|||||.+|++++|||||||||||+.+|+++++|++++|++.+++..+.++++|++...+...++
T Consensus 289 ~kia~Dl~ll~S~~r~~~gei~lp~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~g~~e~~~~~~~~~~~ 368 (466)
T 1vdk_A 289 MKIGNDVRWLASGPYAGIGEITIPANEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLNVYKPVMAYS 368 (466)
T ss_dssp HHHHHHHHHHTCBSSSSCCSEECCCCSCCSSCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBTTBCSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCceeEECCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHhHHHHHHHHHHccchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhcccccChHHHHHHHHHHHHcCCCHHHHHHHcCCCCHH
Q psy10160 464 VLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKVAALKLGYLTEE 543 (558)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l~~~~a~~~~~~a~~~~~~~~~~~~~~~~l~~~ 543 (558)
+++++..+.+++..+..+++++|+||++||+++++.+++++|+|++++||+.|++++++|.++|++++|++.+.+.|+++
T Consensus 369 l~~s~~~l~~~l~~~~~~~l~gl~vn~erm~~~l~~~~~l~t~La~~lg~~~a~~~v~~a~~~g~~l~e~~~~~~~l~~~ 448 (466)
T 1vdk_A 369 TLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPMLATALNKAIGYDKAAEIVKKALKEKKTLKQAALELGYLTEE 448 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGCEECHHHHHHHHTTCGGGGHHHHHHHCSHHHHTTTTTSCC--CCHHHHHHHTSSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCEEcHHHHHHHHHhcchHHHHHHHhccHHHHHHHHHHHHHcCCCHHHHHHhcCCCCHH
Confidence 99999888888887767899999999999999999999999999999999999999999999999999999999889999
Q ss_pred HHhhhcCcccccCCC
Q psy10160 544 EFNKWVVPEDMLGPK 558 (558)
Q Consensus 544 ~~~~~~~p~~~~~~~ 558 (558)
+++++|||+.|+++.
T Consensus 449 ~~~~~ldp~~~~~~~ 463 (466)
T 1vdk_A 449 EFDRIVVPMRLAKPH 463 (466)
T ss_dssp HHHHHCCHHHHHCCC
T ss_pred HHHHHcCHHHhcCCC
Confidence 999999999999863
No 11
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A*
Probab=100.00 E-value=2.6e-53 Score=432.60 Aligned_cols=308 Identities=17% Similarity=0.108 Sum_probs=266.4
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 96 g~~vH~g~SsnDv~~Ta~~-L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 173 (444)
T 2pfm_A 96 RKWVHYGLTSTDVVDTALS-YILKQANEIILKDLENFVSILANKAKEHKYTIMMGRTHGVHAEPTTFGLKLGL-WYEEMK 173 (444)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccCCccceeccHHHHHHH-HHHHHH
Confidence 4678888888888877755 333333332332222 22233 8899999999999999999999998 999999
Q ss_pred chHHHHHhHhh---hhhhhcCCCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q psy10160 313 PNDRQALNIVS---IFYFTYLVKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAND 389 (558)
Q Consensus 313 ~~~~~l~~~~~---~~~~~g~~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~d 389 (558)
|+++||+++.. .+++||++||+.++++.+++++++.|||+.+... |++.+||+++|++++|+.++++|+|||+|
T Consensus 174 r~~~rL~~~~~~~~~~~lGgAvGt~~~~~~~~~~~~a~~LGl~~~~~~---d~~~~rD~~~e~~~~l~~la~~L~kia~D 250 (444)
T 2pfm_A 174 RNVERFKQAANTVRVGKLSGAVGTYANIDPFVEKYVCENLGLEAAPIS---TQTLQRDRHAHYMSTLALIATSIEKMAVE 250 (444)
T ss_dssp HHHHHHHHHHHHTCEECCCCTTSSCTTSCHHHHHHHHHHTTCEECSSC---SSSCCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCchhhccCCcCCHHHHHHHHHHhCCCCCCCC---cCccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997774 5567789999999987899999999999966655 45789999999999999999999999999
Q ss_pred hhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHHH
Q psy10160 390 IRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLRS 467 (558)
Q Consensus 390 ~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (558)
|++|+ ++||||+.+|+ +|+|||||||||||+.+|+++++|++++|++.+++... .+++++|...|.++|.++++
T Consensus 251 l~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~-~~~~erd~~~~~~~~~~l~~ 326 (444)
T 2pfm_A 251 IRGLQ---KSETREVEEAFAKGQKGSSAMPHKRNPIGSENMTGLARVIRGYMMTAYENV-PLWHERDISHSSAERVILPD 326 (444)
T ss_dssp HHHHT---STTTCSEECCCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHTS-CCCTTCCSHHHHHHHHHHHH
T ss_pred HHHHh---cccccccccccccCCCcCccCCcccCCHHHHHHHHHHHHHHHHHHHHHHhC-cccccccccchHHHHHHHHH
Confidence 99999 59999999997 79999999999999999999999999999999887654 68999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccc-cChHHHHHH----HHHHHHcCCCHHHHHHH
Q psy10160 468 IRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPH-IGYDKAAKI----AKTAHKEGTTLKVAALK 536 (558)
Q Consensus 468 ~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~-l~~~~a~~~----~~~a~~~~~~~~~~~~~ 536 (558)
+..+...++.++.+++++|+||++||+++++.+++++ +.|++. +||++||++ ++.|.++|++++|++.+
T Consensus 327 ~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~ 406 (444)
T 2pfm_A 327 ATIALNYMLNRFGNIVKNLTVYPENMKRNMTRTYGLIYSQRVMLTLIDKGMVREEAYDIVQPKAMEAWETQVQFKELVEA 406 (444)
T ss_dssp HHHHHHHHHHHHHHHHHTCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHccCEECHHHHHHHHHhCcCchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHCCCHHHHHhc
Confidence 9999999999999999999999999999998555443 677776 999999965 77888999999999998
Q ss_pred c----CCCCHHHHhhhcCcccccCC
Q psy10160 537 L----GYLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 537 ~----~~l~~~~~~~~~~p~~~~~~ 557 (558)
. +.|++++++++|||++|+|.
T Consensus 407 ~~~~~~~l~~~~l~~~ldp~~~~~~ 431 (444)
T 2pfm_A 407 DERITSKLTQEEINECFNYEHHMQH 431 (444)
T ss_dssp CHHHHTTSCHHHHHHHTCGGGGGTT
T ss_pred chhhhccCCHHHHHHhCCHHHHHhH
Confidence 7 78999999999999999986
No 12
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1
Probab=100.00 E-value=2.8e-53 Score=434.74 Aligned_cols=307 Identities=20% Similarity=0.191 Sum_probs=254.5
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 101 ~~~vH~g~SsnD~~~Ta~~-L~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 178 (454)
T 1q5n_A 101 ARYVHWGATSQDILDTACI-LQCRDALAIVQNQVQQCYETALSQAQTYRHQVMMGRTWLQQALPITLGHKLAR-WASAFK 178 (454)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeeccccCCcCcccHHHHHHHH-HHHHHH
Confidence 5678888888888877755 333333332322222 22233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHhh---hhhhhcCCCCChhH---HHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIVS---IFYFTYLVKLSELL---ETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 313 ~~~~~l~~~~~---~~~~~g~~g~~~~~---~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
|+++||+++.. .+++||++||+.++ ++.+++++++.|||+.+...| +.+||+++|++++|+.++++|+||
T Consensus 179 r~~~rL~~~~~~~~~~~lGgAvGT~~~~~~~~~~~~~~~a~~LG~~~~~~~~----~~~rD~~~e~~~~l~~la~~L~ki 254 (454)
T 1q5n_A 179 RDLDRINAIKARVLVAQLGGAVGSLASLQDQGSIVVEAYAKQLKLGQTACTW----HGERDRIVEIASVLGIITGNVGKM 254 (454)
T ss_dssp HHHHHHHHHHHHHSBCCCCCTTSSCGGGTTCHHHHHHHHHHHHTCBCCSSCC----SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCCchHhhcCcccccccHHHHHHHHHHhCcCCCCCCC----ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999987764 56667899999998 678999999999999877766 679999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNV 464 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (558)
|+||++|+ ++||||+.+|+ +++|||||||||||+.+|+++++|++++|++.+++.. ..+++++|...|...|.+
T Consensus 255 a~Dl~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~ 330 (454)
T 1q5n_A 255 ARDWSLMM---QTEIAEVFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVPALMSSIYQS-MVQEHERSLGAWHAEWLS 330 (454)
T ss_dssp HHHHHHHT---STTTCCEECCC-------------CCCHHHHHHHHHHHHHHHHHHHHHHT-TCCCTTSCSSHHHHHHHH
T ss_pred HHHHHHHh---ccccchhccccccCCCCCccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh-ccchhcccccchHHHHHH
Confidence 99999999 49999999997 7999999999999999999999999999999998754 567899999999988999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccccChHHHHHHH----HHHHHcCCCHHHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPHIGYDKAAKIA----KTAHKEGTTLKVAA 534 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~l~~~~a~~~~----~~a~~~~~~~~~~~ 534 (558)
++++..+...++.++.+++++|+||++||+++++.+.+++ +.|++.+||++||++| +.|.++|++++|++
T Consensus 331 l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~ 410 (454)
T 1q5n_A 331 LPEIFQLTAGALERTLDVLKGMEVNAENMHQNIECTHGLIMAEAVMMALAPHMGRLNAHHVVEAACKTAVAEQKHLKDII 410 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHTTTTGGGHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhCcChhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999899999999999999999999999998554443 6677779999999854 78889999999999
Q ss_pred HHc----CCCCHHHHhhhcCcccccCC
Q psy10160 535 LKL----GYLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 535 ~~~----~~l~~~~~~~~~~p~~~~~~ 557 (558)
.+. ..|+++++++++||++|+|+
T Consensus 411 ~~~~~~~~~l~~~~l~~~ldp~~~~g~ 437 (454)
T 1q5n_A 411 SQVDEVKQYFNPSQLDEIFKPESYLGN 437 (454)
T ss_dssp TTCHHHHTTCCHHHHHHHTCGGGGCTT
T ss_pred hcchhhhcCCCHHHHHHhCCHHHHcCc
Confidence 876 78999999999999999986
No 13
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A
Probab=100.00 E-value=2e-53 Score=432.57 Aligned_cols=308 Identities=17% Similarity=0.112 Sum_probs=261.6
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 84 g~~vH~g~SsnD~~~Ta~~-l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 161 (429)
T 1c3c_A 84 SRFFHYGLTSSDVLDTANS-LALVEAGKILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLG-WYSEMK 161 (429)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCcCCCcCcCCcHHHHHHH-HHHHHH
Confidence 4678888888888877755 333333333332222 22233 8899999999999999999999998 999999
Q ss_pred chHHHHHhHhh---hhhhhcCCCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q psy10160 313 PNDRQALNIVS---IFYFTYLVKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAND 389 (558)
Q Consensus 313 ~~~~~l~~~~~---~~~~~g~~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~d 389 (558)
|+++||+++.. .+++||++||+.++++.+++++++.|||+.+... |++.+||+++|++++|+.++++|+|||+|
T Consensus 162 r~~~rL~~~~~~~~~~~lGgAvGt~~~~~~~~~~~~a~~LGl~~~~~~---d~~~~rD~~~e~~~~l~~~a~~L~kia~D 238 (429)
T 1c3c_A 162 RNVQRLERAIEEVSYGKISGAVGNYANVPPEVEEKALSYLGLKPEPVS---TQVVPRDRHAFYLSTLAIVAAGIERIAVE 238 (429)
T ss_dssp HHHHHHHHHHHHTCEECCCCTTSSCSSSCHHHHHHHHHHTTCEECSSC---SSSCCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCchhhcCCccCCHHHHHHHHHHcCCCCCCCC---cCccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987774 5667789999999987899999999999966555 45789999999999999999999999999
Q ss_pred hhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHHH
Q psy10160 390 IRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLRS 467 (558)
Q Consensus 390 ~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (558)
|++|+ ++||||+.+|+ +++|||||||||||+.+|++++++++++|++.+++... .+++++|...|..++.++++
T Consensus 239 l~ll~---~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~-~~~~erd~~~~~~~~~~l~~ 314 (429)
T 1c3c_A 239 IRHLQ---RTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLENI-ALWHERDISHSSVERYVFPD 314 (429)
T ss_dssp HHHHT---STTTCSEECCCCC-----CCCTTCCCCHHHHHHHHHHHHHHHTHHHHHHTT-CCSTTCCSHHHHHHHHHHHH
T ss_pred HHHHh---ccccchhccccccCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcC-CccccccccccHHHHHHHHH
Confidence 99999 49999999997 78999999999999999999999999999999887654 68999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccc-cChHHHHHH----HHHHHHcCCCHHHHHHH
Q psy10160 468 IRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPH-IGYDKAAKI----AKTAHKEGTTLKVAALK 536 (558)
Q Consensus 468 ~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~-l~~~~a~~~----~~~a~~~~~~~~~~~~~ 536 (558)
+..+...++.++.+++++|+||++||+++++.+++++ +.|++. +||++||++ ++.|.++|++++|++.+
T Consensus 315 ~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~a~~la~~L~~~gig~~~A~~iv~~~~~~a~~~g~~l~e~~~~ 394 (429)
T 1c3c_A 315 ATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLE 394 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTTTTGGGHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCcCeeCHHHHHHHHHhccChHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHHhC
Confidence 9999999999999999999999999999998555443 667776 999999965 77888999999999998
Q ss_pred c----CCCCHHHHhhhcCcccccCC
Q psy10160 537 L----GYLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 537 ~----~~l~~~~~~~~~~p~~~~~~ 557 (558)
. ..|+++++++++||+.|+|.
T Consensus 395 ~~~~~~~l~~~~l~~~ldp~~~~~~ 419 (429)
T 1c3c_A 395 DEEVKKLVTKEELEELFDISYYLKH 419 (429)
T ss_dssp CHHHHTTCCHHHHHHTTCTHHHHTT
T ss_pred ChhhhccCCHHHHHHhCCHHHHhhh
Confidence 7 78999999999999999985
No 14
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1
Probab=100.00 E-value=3e-53 Score=433.93 Aligned_cols=307 Identities=23% Similarity=0.199 Sum_probs=257.1
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 97 ~~~vh~g~SsnD~~~Ta~~-l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 174 (450)
T 1re5_A 97 ERYVHLGATSQDAMDTGLV-LQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAG-VLGALT 174 (450)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCccCccCcHHHHHHH-HHHHHH
Confidence 6778888888888877755 333333332332222 22233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHh---hhhhhhcCCCCChhHHH---HHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIV---SIFYFTYLVKLSELLET---KCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 313 ~~~~~l~~~~---~~~~~~g~~g~~~~~~~---~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
|+++||+++. ..+++||++||+.++++ .+++++++.|||+.+..+ ++++||+++|++++|+.++++|+||
T Consensus 175 r~~~rL~~~~~~~~~~~lGGAvGt~~~~~~~~~~~~~~la~~LG~~~~~~~----~~~~rD~~~e~~~~l~~la~~L~ki 250 (450)
T 1re5_A 175 RHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLPEQP----WHTQRDRLVEFASVLGLVAGSLGKF 250 (450)
T ss_dssp HHHHHHHHHHHHHSBCCCCCTTSSCGGGGGGHHHHHHHHHHHHTCBCCSSC----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCcchhcCCcccCcchHHHHHHHHHHhCcCCCCcc----cccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999998776 45667789999999886 899999999999977665 4999999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNV 464 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (558)
|+||++|+ ++||||+.+|+ +++|||||||||||+.+|++++++++++|++.+++..+ ..++++|...|...|..
T Consensus 251 a~Dl~ll~---~~e~~El~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~-~~~~erd~~~~~~~~~~ 326 (450)
T 1re5_A 251 GRDISLLM---QTEAGEVFEPSAPGKGGSSTMPHKRNPVGAAVLIGAATRVPGLLSTLFAAM-PQEHERSLGLWHAEWET 326 (450)
T ss_dssp HHHHHHHT---STTTCCEECCCCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHTC-CCCTTBCSSTTTTHHHH
T ss_pred HHHHHHHh---ccCcceeecccccCCCccccCCCCcCCHHHHHHHHHHHHHHHHHHHHHHhC-hhhccccccchHHHHHH
Confidence 99999999 59999999997 69999999999999999999999999999999997655 46899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccccChHHHHH----HHHHHHHcCCCHHHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPHIGYDKAAK----IAKTAHKEGTTLKVAA 534 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~l~~~~a~~----~~~~a~~~~~~~~~~~ 534 (558)
++++..+.++++.++.+++++|+||++||+++++.+++++ +.|++.+||++||+ ++++|.++|++++|++
T Consensus 327 l~~~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~s~~~~~Ae~l~~~L~~gig~~~A~~~v~~~~~~a~~~g~~l~e~~ 406 (450)
T 1re5_A 327 LPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQRLGRDRAHHLLEQCCQRAVAEQRHLRAVL 406 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHTTSTTGGGHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhCcChhHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999999999999999999999999999998555444 67777899999995 5678889999999999
Q ss_pred HHc----CCCCHHHHhhhcCcccccCC
Q psy10160 535 LKL----GYLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 535 ~~~----~~l~~~~~~~~~~p~~~~~~ 557 (558)
.+. +.|++++++++|||++|+|+
T Consensus 407 ~~~~~~~~~l~~~~l~~~ldp~~~~~~ 433 (450)
T 1re5_A 407 GDEPQVSAELSGEELDRLLDPAHYLGQ 433 (450)
T ss_dssp HTCHHHHHHSCHHHHHHHTCGGGCCTT
T ss_pred HhChhhccCCCHHHHHHhcCHHHHhhh
Confidence 876 67999999999999999986
No 15
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP}
Probab=100.00 E-value=2.2e-53 Score=434.46 Aligned_cols=307 Identities=22% Similarity=0.195 Sum_probs=251.9
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchh-------hhhhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRA-------VEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~-------l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+... +.....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 95 g~~vH~g~SsnDv~~Ta~~-L~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 172 (451)
T 3c8t_A 95 GKYLHWGATTQDIMDTATV-LQIRDGLALISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGYKAAV-WLSAFD 172 (451)
T ss_dssp GGGSSSSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCceeecccCCCCceeehHHHHHHH-HHHHHH
Confidence 4678888888888877755 3333333222222 2223233 8899999999999999999999998 999999
Q ss_pred chHHHHHhHhh---hhhhhcCCCCChhH---HHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIVS---IFYFTYLVKLSELL---ETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 313 ~~~~~l~~~~~---~~~~~g~~g~~~~~---~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
|+++||+++.. .+++||++||+.++ ++.+++++++.|||+.....| +.+||+++|++++|+.++++|+||
T Consensus 173 r~~~rL~~~~~~~~~~~lGgAvGT~~~~~~~~~~~~~~~a~~LGl~~~~~~~----~~~rD~~~e~~~~l~~la~~L~ki 248 (451)
T 3c8t_A 173 RHAARLEEISPRVLVVEFSGASGTLASLGTRGLDVQRELARELNLGVPSITW----HSARDAVAETVQFLALVSGSLGKL 248 (451)
T ss_dssp HHHHHHHHHHHHHCBCCCCCTTSSCGGGTTCHHHHHHHHHHHHTCBCCSSCC----SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccCCchhhhcCcccccccHHHHHHHHHHhCCCCCCCCC----ccCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999987764 55667899999999 678999999999999877766 679999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNV 464 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (558)
|+||++|+ ++||||+.+|+ +++|||||||||||+.+|+++++|++++|++.+++.. ..+++++|...|...|.+
T Consensus 249 a~Dl~ll~---~~e~gEl~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~ 324 (451)
T 3c8t_A 249 AMDISIMM---TTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGARIVRNHATSMLDA-MIHDFERATGPWHLEWSA 324 (451)
T ss_dssp HHHHHHHT---STTTCCEECC---------------CCHHHHHHHHHHHHHHHHHHHHHHH-TCCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHh---CccccccccccccCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHhc-CchhhcccccchHHHHHH
Confidence 99999999 49999999997 7999999999999999999999999999999998754 567899999999888899
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccccChHHHHHHH----HHHHHcCCCHHHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPHIGYDKAAKIA----KTAHKEGTTLKVAA 534 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~l~~~~a~~~~----~~a~~~~~~~~~~~ 534 (558)
++++..+...++.++.+++++|+||++||+++++.+.+++ +.|++.+||++||++| +.|.++|++++|++
T Consensus 325 l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~ae~l~~~L~~~ig~~~A~~iv~~~~~~a~~~g~~l~e~~ 404 (451)
T 3c8t_A 325 VPEGFAVASGILYQAEFMLGGLQVFPDRMRENLDHSRGLIVAEAVMMALAPHTGRKEAHDIVYLGCRRAVEDKTGLFEVL 404 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHTTTTTGGGHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCEECHHHHHHHHHhccChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 9999999899999999999999999999999998554443 6667779999999854 78889999999998
Q ss_pred HHc----CCCCHHHHhhhcCcccccCC
Q psy10160 535 LKL----GYLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 535 ~~~----~~l~~~~~~~~~~p~~~~~~ 557 (558)
.+. ..|++++++++|||+.|+|+
T Consensus 405 ~~~~~~~~~l~~~~l~~~ldp~~~~~~ 431 (451)
T 3c8t_A 405 RTMPEVAKPLGEEALRDLTDPRNYLGS 431 (451)
T ss_dssp TTCHHHHHHHCHHHHHHHTCGGGCCTT
T ss_pred hcChhhhccCCHHHHHHhCCHHHHhch
Confidence 876 56899999999999999986
No 16
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A*
Probab=100.00 E-value=2.6e-50 Score=415.06 Aligned_cols=308 Identities=16% Similarity=0.097 Sum_probs=247.5
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhhh-------hhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA-------EAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~-------~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|+|.|++++.+++.. ...+..+..+...+.. ...+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 125 ~~~iH~G~TS~Di~dta~~-L~lr~al~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 202 (503)
T 2j91_A 125 AGIIHLGATSCYVGDNTDL-IILRNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQLTTVGKRCCL-WIQDLC 202 (503)
T ss_dssp GGGTTTTCCTHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cccccCCCCHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeccccCccceecchHHHHHH-HHHHHH
Confidence 6789999999988887765 4444444333333222 2233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHhhhhh---hhcCCCCChhHHH----------HHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIVSIFY---FTYLVKLSELLET----------KCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTV 379 (558)
Q Consensus 313 ~~~~~l~~~~~~~~---~~g~~g~~~~~~~----------~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 379 (558)
|+++||+++..++. .+|++||++++++ .+.+++++.|||+. ...++. |+++||+++|++++|+.+
T Consensus 203 rd~~RL~~~~~~l~~lg~gG~~GT~a~~~~~f~~D~~~~~~v~~~~a~~LGl~~-~~~~s~-~~~~rd~~~e~~~~la~l 280 (503)
T 2j91_A 203 MDLQNLKRVRDDLRFRGVKGTTGTQASFLQLFEGDDHKVEQLDKMVTEKAGFKR-AFIITG-QTYTRKVDIEVLSVLASL 280 (503)
T ss_dssp HHHHHHHHHHHHCCBCCSCCTTSSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSC-BCSCCS-SSCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccccccccccchhhhccccCCchHHHHHHHHHHHHHhCCCC-CCCccc-ccccChHHHHHHHHHHHH
Confidence 99999997776554 5678999988853 45599999999993 333443 799999999999999999
Q ss_pred HHHHHHHhhhhhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccch
Q psy10160 380 AVSLMKIANDIRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFK 457 (558)
Q Consensus 380 ~~~l~k~a~d~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (558)
+++|+|||+||++|+| +||+.+|+ +++|||||||||||+.+|+++++|++++|++++++...+..++|+|...
T Consensus 281 a~~L~kia~Dirll~s-----~~ei~ep~~~~q~GSSiMP~K~NPv~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~ 355 (503)
T 2j91_A 281 GASVHKICTDIRLLAN-----LKEMEEPFEKQQIGSSAMPYKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDD 355 (503)
T ss_dssp HHHHHHHHHHHHHHHH-----HTSEECCC-----------CCCCCHHHHHHHHHHHHHHHTTHHHHHHHHTCCTTCCGGG
T ss_pred HHHHHHHHHHHHHHhc-----cceeeccccCCCCCCCCCccccCcHHHHHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 9999999999999995 99999995 6899999999999999999999999999999988888888899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhh-hhh-----ccc-ccChHHHHHHHHH-HHHc---
Q psy10160 458 PLIVSNVLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLML-VTA-----LNP-HIGYDKAAKIAKT-AHKE--- 526 (558)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~-~~~-----la~-~l~~~~a~~~~~~-a~~~--- 526 (558)
+..++..++++..+.++++.++..++++|+||++||+++++.++++ +|+ |.. .++|++||+++++ |.+.
T Consensus 356 s~~~~~~l~~~~~~~~~~l~~~~~~l~gL~vn~erm~~~l~~s~~~~ate~v~~~lv~~G~~~~~Ah~~v~~~a~~~g~~ 435 (503)
T 2j91_A 356 SANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIRQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASV 435 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCEECHHHHHHHHHHHHHHHSHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhhHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhccChHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhhH
Confidence 9999999999999999999999999999999999999999987654 444 333 4788999997643 3322
Q ss_pred ------CCCHHHHHHHcCC--CCHHHHhhhcCcccccCC
Q psy10160 527 ------GTTLKVAALKLGY--LTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 527 ------~~~~~~~~~~~~~--l~~~~~~~~~~p~~~~~~ 557 (558)
...+.|.+..... +++++++++|||+.|+|.
T Consensus 436 V~~~~~~~~l~e~l~~~~~~~l~~eel~~~ldp~~~~g~ 474 (503)
T 2j91_A 436 VKQEGGDNDLIERIQVDAYFSPIHSQLDHLLDPSSFTGR 474 (503)
T ss_dssp HHHSCCCCCHHHHHHHCGGGHHHHTTHHHHTCGGGGSTT
T ss_pred HHHHHhcccHHHHHhcCcccCCCHHHHHHhcCHHHhCCc
Confidence 2367776665544 568899999999999986
No 17
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1
Probab=100.00 E-value=1.3e-49 Score=400.24 Aligned_cols=284 Identities=18% Similarity=0.125 Sum_probs=234.5
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchh-------hhhhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRA-------VEAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~-------l~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+... +.....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 87 g~~vH~g~SsnD~~~Ta~~-l~~r~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 164 (403)
T 1dof_A 87 CRYVHYGATSNDIIDTAWA-LLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFAN-YYYELY 164 (403)
T ss_dssp CSCTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred CCcccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccCcccccCcHHHHHHH-HHHHHH
Confidence 5678888888888877754 3333333222222 2223333 8899999999999999999999998 999999
Q ss_pred chHHHHHhHh---hhhhhhcCCCCChhH---HHHHHHHHHhHhCCCcccCCChhHHhh-cCcHHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIV---SIFYFTYLVKLSELL---ETKCAAKIAELTGLPFKSAPNKFEALA-AHDALVEVSGALNTVAVSLMK 385 (558)
Q Consensus 313 ~~~~~l~~~~---~~~~~~g~~g~~~~~---~~~~~~~~a~~lg~~~~~~~~~~~~~~-~~d~~~~~~~~l~~~~~~l~k 385 (558)
|+ +||+++. ..+++||++||+.++ ++.+++++++.|||+.+..+| +. +||+++|++++|+.++++|+|
T Consensus 165 r~-~rL~~~~~~~~~~~lGgAvGt~~~~~~~~~~~~~~~a~~lGl~~~~~~~----~~~~rD~~~e~~~~l~~~a~~L~k 239 (403)
T 1dof_A 165 IA-CRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITT----QVAPRESFAVLASALALMAAVFER 239 (403)
T ss_dssp HH-HHHHHHHHHHCCBCCCCTTSSCGGGGGGHHHHHHHHHHHTTCCBCSSCS----SSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHhcccCccHHHhhCcccccccHHHHHHHHHHhCcCCCCCcc----hhhccHHHHHHHHHHHHHHHHHHH
Confidence 99 9998776 456677899999988 678999999999999877665 67 999999999999999999999
Q ss_pred HhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHH
Q psy10160 386 IANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVL 465 (558)
Q Consensus 386 ~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (558)
||+||++|+ ++||||+.+| + +|||||||||||+.+|++++++++++|++.+++.. ..+++++|...|...|..+
T Consensus 240 ia~Dl~ll~---~~e~~ei~lp-~-~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~-~~~~~erd~~~~~~~~~~l 313 (403)
T 1dof_A 240 LAVEIRELS---RPEIGEVVEG-G-GGSSAMPHKANPTASERIVSLARYVRALTHVAFEN-VALWHERDLTNSANERVWI 313 (403)
T ss_dssp HHHHHHHHT---STTTCSEESC-C----------CCCHHHHHHHHHHHHHHHHHHHHHHT-TCCCTTCCGGGHHHHHHHH
T ss_pred HHHHHHHHh---CCccCeEeCC-C-CccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc-CcccccccccchHHHHHHH
Confidence 999999999 5999999999 8 99999999999999999999999999999988654 4578999999998888899
Q ss_pred HHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh------hhcccc-cChHHHHHHHH----HHHHcCC-CHHHH
Q psy10160 466 RSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV------TALNPH-IGYDKAAKIAK----TAHKEGT-TLKVA 533 (558)
Q Consensus 466 ~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~------~~la~~-l~~~~a~~~~~----~a~~~~~-~~~~~ 533 (558)
+++..+...++.++.+++++|+||++||+++++.+.+++ +.|++. +||++||++++ +|.++|+ +++|+
T Consensus 314 ~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~s~~~~~a~~l~~~L~~~gig~~~A~~iv~~~~~~a~~~g~~~l~e~ 393 (403)
T 1dof_A 314 PEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERL 393 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHCHHHHHHHHHHTTCCHHHHHHHHTTCCCCCCGGGGCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCcCEECHHHHHHHHHhccCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCcCHHHH
Confidence 899888888889999999999999999999998666554 777776 99999999865 7778998 99998
Q ss_pred HHHc
Q psy10160 534 ALKL 537 (558)
Q Consensus 534 ~~~~ 537 (558)
+.+.
T Consensus 394 ~~~~ 397 (403)
T 1dof_A 394 IEDA 397 (403)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 18
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans}
Probab=100.00 E-value=1.2e-49 Score=409.78 Aligned_cols=308 Identities=12% Similarity=0.094 Sum_probs=231.0
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhhh-------hhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA-------EAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~-------~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.|+++..+++.. ...+..+..+...+.. ...+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 99 ~~~iH~G~TS~Di~~ta~~-L~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 176 (478)
T 1yis_A 99 AGIIHLGATSCFVQDNADL-IAYRDSIDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTASLVTVGKRGVL-WAQELL 176 (478)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred hhheeCCCchhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeecccCCccceeccHHHHHHH-HHHHHH
Confidence 6788999999988887765 4444444333333222 2233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHhhhhh---hhcCCCCChhHHH----------HHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIVSIFY---FTYLVKLSELLET----------KCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTV 379 (558)
Q Consensus 313 ~~~~~l~~~~~~~~---~~g~~g~~~~~~~----------~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 379 (558)
|+++||+++..++. ++|++||++++++ .+.+++++.|||+. ...++. |+++||+++|++++|+.+
T Consensus 177 rd~~rL~~~~~~l~~lg~gg~~GT~a~~~~~f~~d~~~~~~v~~~~a~~LG~~~-~~~~s~-~~~~rd~~~e~~~~l~~~ 254 (478)
T 1yis_A 177 MAFQSLSEFRDKMRFRGIKGATGTQDSFLTLFAGDESKVEALDELVTKKANFSN-RFLITG-QTYSRQQDSQLVFSLSLL 254 (478)
T ss_dssp HHHHHHHHHHHHCCBCCSCTTTSSCHHHHHHTTTCHHHHHHHHHHHHHHTTCSC-BCSSCS-SSCCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccchhccchhhhcccCcchhhHHHHHHHHHHHhCcCC-CCCccc-cccCChHHHHHHHHHHHH
Confidence 99999997776554 5678999988753 45599999999993 334443 799999999999999999
Q ss_pred HHHHHHHhhhhhhhccCCCccccceecCC--CCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccch
Q psy10160 380 AVSLMKIANDIRFLASGPRCGLGELSLPE--NEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFK 457 (558)
Q Consensus 380 ~~~l~k~a~d~~~~~s~~~~e~~e~~~~~--~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (558)
+++|+|||+||++|+| +||+.+|+ +++|||||||||||+.+|+++++|++++|++++++..++..++|+|...
T Consensus 255 a~~L~kia~Di~ll~s-----~~el~~p~~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~er~~~~ 329 (478)
T 1yis_A 255 GAAAKKVCTDIRVLQA-----FGELLEPFEKDQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDD 329 (478)
T ss_dssp HHHHHHHHHHHHHHHH-----TTSEECC-------------CCCCHHHHHHHHHHHHHHTSHHHHHHHHHTCCTTCCGGG
T ss_pred HHHHHHHHHHHHHHhh-----hhheeccccCCCCccccCCcccCCHHHHHHHHHHHHHHHhHHHHHHHhccCCcccCcch
Confidence 9999999999999995 99999994 6899999999999999999999999999999988888888899999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhh-hhh-----ccc-ccChHHHHHHHHH--------
Q psy10160 458 PLIVSNVLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLML-VTA-----LNP-HIGYDKAAKIAKT-------- 522 (558)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~-~~~-----la~-~l~~~~a~~~~~~-------- 522 (558)
+..++..++++..+.++++.++..|+++|+||++||+++++.++++ +|+ |.. .++|++||+++++
T Consensus 330 ~~~~~~~l~~~~~~~~~~l~~~~~~l~gl~vn~erm~~~l~~~~~~~~te~v~~~l~~~G~~~~~Ah~~v~~~a~~~~~~ 409 (478)
T 1yis_A 330 SAGRRMLIPDVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEEGVDRQQAHAVIRKTALEAKQL 409 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHHC------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCEECHHHHHHHHHhCCChHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987644 444 333 3677999997643
Q ss_pred HHHcCCCHHHHHHHcCC-CCHHHHhhhc-CcccccCC
Q psy10160 523 AHKEGTTLKVAALKLGY-LTEEEFNKWV-VPEDMLGP 557 (558)
Q Consensus 523 a~~~~~~~~~~~~~~~~-l~~~~~~~~~-~p~~~~~~ 557 (558)
+.++|++++++..+... +++++++++| ||..|+|.
T Consensus 410 v~~~g~~~~~l~~~~~~~l~~~el~~~l~dp~~~~g~ 446 (478)
T 1yis_A 410 QATQKVDIRQTMADPFFDSVRDRVVGLVNNPINFTGR 446 (478)
T ss_dssp ---------CCCTTTTSTTTHHHHHHHHHCGGGGSTT
T ss_pred HHHcCCCHHHHhcCCCCCCCHHHHHHHHhCHHHHcCc
Confidence 22567775444333333 7899999999 99999986
No 19
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp}
Probab=100.00 E-value=2e-49 Score=401.49 Aligned_cols=305 Identities=18% Similarity=0.137 Sum_probs=238.6
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+.....+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 85 ~~~iH~G~SsnDv~~Ta~~-L~lr~~~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 162 (438)
T 4eei_A 85 GKFFHFGVTSSDIIDSALS-LQIRDSMSYVIKDLEALCDSLLTKAEETKEIITMGRSHGMFAEPMSFGQKFLG-AYVEFK 162 (438)
T ss_dssp TTTTTCSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEEETHHHHHH-HHHHHH
T ss_pred hcccCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccCccCCchhHHHHHHH-HHHHHH
Confidence 6688999999988887765 333333322322222 22233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHhhhh---hhhcCCCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q psy10160 313 PNDRQALNIVSIF---YFTYLVKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAND 389 (558)
Q Consensus 313 ~~~~~l~~~~~~~---~~~g~~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~d 389 (558)
|+++||+++..++ +++|++||+..+++.+++++++.|||+..+.. +++++||+++|++++|+.++++|+|||+|
T Consensus 163 r~~~rL~~~~~~~~~~~lgGAvGT~~~~~~~~~~~~a~~LG~~~~~~~---~~v~~rD~~~e~~~~l~~~a~~L~kia~D 239 (438)
T 4eei_A 163 RRLKDLKDFQKDGLTVQFSGAVGNYCILTTEDEKKAADILGLPVEEVS---TQVIPRDRIAKLISIHGLIASAIERLAVE 239 (438)
T ss_dssp HHHHHHHHHHHTTCCBCCCCTTSCCSSSCHHHHHHHHHHHTCCBCSSC---SSSCCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHhcCccHhhCcccccHHHHHHHHHHcCCCCCCcc---ccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887554 55678999999888889999999999854333 47899999999999999999999999999
Q ss_pred hhhhccCCCccccceecC--CCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHHH
Q psy10160 390 IRFLASGPRCGLGELSLP--ENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLRS 467 (558)
Q Consensus 390 ~~~~~s~~~~e~~e~~~~--~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (558)
|++|+ ++||||+.+| ++++|||||||||||+.+|+++++|++++|++.+++ .....+++++...+..+|..+++
T Consensus 240 i~ll~---~~e~gel~~~f~~~q~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~-~~~~~~~erdl~~~~~er~~l~~ 315 (438)
T 4eei_A 240 IRHLH---RSDVFEVYEGFSKGQKGSSTMPHKKNPISTENLTGMARMLRSHVSIAL-ENCVLWHERDISHSSAERFYLPD 315 (438)
T ss_dssp HHHHH---STTTCSEECCC------------CCCCHHHHHHHHHHHHHHHHHHHHH-HTTCCCTTCCSHHHHHHHHHHHH
T ss_pred HHHHh---ccccceeccccccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHH-hccchhcCccchhhHHHHHHHHH
Confidence 99999 5999999998 469999999999999999999999999999986553 34455689998888888999999
Q ss_pred HHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhH--hhhhhcccc-----cChHHHHHH----HHHHHHcCCCHHHHHHH
Q psy10160 468 IRLIADSATAFTDKCVSGIVANEENIHRLLHESL--MLVTALNPH-----IGYDKAAKI----AKTAHKEGTTLKVAALK 536 (558)
Q Consensus 468 ~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~--~~~~~la~~-----l~~~~a~~~----~~~a~~~~~~~~~~~~~ 536 (558)
+..+.++++.++.+++++|+||+++|+++++.++ +++++++.. ++|++||++ +++|.+ |++++|++.+
T Consensus 316 ~~~~~~~~l~~~~~~l~~l~vn~erm~~~l~~~~~~~~a~~~a~~Lv~~g~~~~~Ah~~v~~~~~~a~~-g~~l~e~~~~ 394 (438)
T 4eei_A 316 NFGIMVYALRRMKNTIDNLVVQRDIIEDRVRSTSAYLSSFYLHFLVANTPFMREDCYKIVQQVAFDLKQ-GESFSKKLQK 394 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHCEECHHHHHHHHHHCCTTHHHHHHHHHHHHSSCCHHHHHHHHHHC--------CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCEECHHHHHHHHHhccCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-CCCHHHHHHH
Confidence 9999999999999999999999999999998644 455566543 699999986 456777 9999999886
Q ss_pred c------C--CCCHHHHhhhcCcccccCC
Q psy10160 537 L------G--YLTEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 537 ~------~--~l~~~~~~~~~~p~~~~~~ 557 (558)
. . .++++++++++| .+.|.
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~d--~~gG~ 421 (438)
T 4eei_A 395 VMHDEHNIILDIPEMDFEGIKK--TYLKE 421 (438)
T ss_dssp HHHHTTCCCCCCCCCSHHHHHH--HHTTT
T ss_pred HHhhhhccccCCCHHHHHHHHH--hcCCc
Confidence 2 2 467888999998 66654
No 20
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-49 Score=406.21 Aligned_cols=305 Identities=19% Similarity=0.165 Sum_probs=243.3
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhh--hhcccccchhhhhhhHHHhhccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADK--KRRSRRSLSVVNKWSLRQAFTTCYPVN 310 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~--~~~grth~q~a~~~t~g~~~~~~~~~~ 310 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ +++ +|.||||+|+|+|+|+||++++ |++.
T Consensus 101 g~~vH~g~SsnDv~~Ta~~-l~lr~~l~~l~~~l~~L~~~L~~~A~~~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~ 178 (462)
T 2e9f_A 101 GGKLHTARSRNDQVATDLR-LYLRGAIDELLALLLALRRVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLA-YYEM 178 (462)
T ss_dssp HHHHTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCEEEEEETTEEEEEEEHHHHHHH-HHHH
T ss_pred ccceecCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcCccccCcccCccCeeccHHHHHHH-HHHH
Confidence 4668888888888777655 333333333332222 22233 789 9999999999999999999998 9999
Q ss_pred ccchHHHHHhHhhhhhh---hcCCCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHh
Q psy10160 311 LDPNDRQALNIVSIFYF---TYLVKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIA 387 (558)
Q Consensus 311 l~~~~~~l~~~~~~~~~---~g~~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a 387 (558)
|.|+++||+++..+++. ||++.++.++ +.+++++++.|||+ .+..|++||+++||+++|++++|+.++++|+|||
T Consensus 179 l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~-~~~~~~~a~~LG~~-~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia 256 (462)
T 2e9f_A 179 LKRDAGRLEDAKERLNESPLGAAALAGTGF-PIDRHFTARELGFK-APMRNSLDAVASRDFALEVLSALNIGMLHLSRMA 256 (462)
T ss_dssp HHHHHHHHHHHHHHHCEECTTCCSSSCCSS-CCCHHHHHHHTTCS-EECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCccccccccCCC-CCCHHHHHHHhCCC-CCCCCcHHHHHccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988766544 4442122223 24678999999999 7889999999999999999999999999999999
Q ss_pred hhhhhhccCCCccccceecCCCC-CCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccc--cccccccchhhHHHHH
Q psy10160 388 NDIRFLASGPRCGLGELSLPENE-PGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSN--GHFELNVFKPLIVSNV 464 (558)
Q Consensus 388 ~d~~~~~s~~~~e~~e~~~~~~~-~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 464 (558)
+||++|+| .|||||.+|+.+ +|||||||||||+.+|++++++++++|++.+++..+.+ .+++++...+ ...+
T Consensus 257 ~Dl~ll~s---~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l 331 (462)
T 2e9f_A 257 EELILYST---EEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLPLAYNKDLQED--KEPL 331 (462)
T ss_dssp HHHHHHTS---TTTCCEECCGGGCEECSSSSSCEECHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSBCGGGGGG--HHHH
T ss_pred HHHHHHhC---CCCCcEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhchhhh--HhHH
Confidence 99999998 669999999875 59999999999999999999999999999999765554 3344444333 2345
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhccccc-----ChHHHHH----HHHHHHHcCCCHHHHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHI-----GYDKAAK----IAKTAHKEGTTLKVAAL 535 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l-----~~~~a~~----~~~~a~~~~~~~~~~~~ 535 (558)
++++..+..++ ..+..++++|+||++||+++++.+++++|+|++.| ||++||+ ++++|.++|++++|++.
T Consensus 332 ~~s~~~~~~~l-~~~~~~l~gl~vn~e~m~~~l~~~~~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~ 410 (462)
T 2e9f_A 332 LDALATYRDSL-RLLAALLPGLKWRRERMWRAAEGGYTLATELADYLAEKGLPFREAHHVVGRLVRRLVEEGRALKDLTL 410 (462)
T ss_dssp HHHHHHHHHHH-HHHHHHGGGCEECHHHHHHHHSCSSTTHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHTTCCGGGCCH
T ss_pred HHHHHHHHHHH-HHHHHHhCcCEECHHHHHHHHhcCccHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 55555555555 55556999999999999999999999999999876 6777765 56788899999999776
Q ss_pred Hc-----CCCCHHHHhhhcCcccccC
Q psy10160 536 KL-----GYLTEEEFNKWVVPEDMLG 556 (558)
Q Consensus 536 ~~-----~~l~~~~~~~~~~p~~~~~ 556 (558)
+. +.|+ +++++++||+.|++
T Consensus 411 ~~~~~~~~~l~-~~l~~~ldp~~~~~ 435 (462)
T 2e9f_A 411 EELQAHHPLFA-EDALPLLRLETAIH 435 (462)
T ss_dssp HHHHHHCTTCC-GGGGGGGSHHHHTT
T ss_pred HHHHHhhhhhH-HHHHHhCCHHHHHh
Confidence 65 7787 68999999999984
No 21
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A
Probab=100.00 E-value=2.9e-49 Score=404.84 Aligned_cols=305 Identities=14% Similarity=0.095 Sum_probs=255.7
Q ss_pred ceeeecccceeEEEEeccCCCCCCCccc-ccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGP-HIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~-w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
+.++|.|.+++|+..++.. ...+..+. .+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 114 ~~~vH~g~SsnDv~~Ta~~-L~lr~~l~~~l~~~L~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l 191 (462)
T 2ptr_A 114 SEFIHFACTSEDINNLSHA-LMLKTARDEVILPYWRQLIDGLKDLAVQYRDIPLLSRTAGQPATPSTIGKEMAN-VAYRM 191 (462)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred hhhccCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCeeceechHHHHHHH-HHHHH
Confidence 5678999998888887765 33343333 2332222 23233 8899999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhhhhhcCCCCChhHH--------HHHHHHHHhHhCCCcccCCChhH-HhhcCcHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIFYFTYLVKLSELLE--------TKCAAKIAELTGLPFKSAPNKFE-ALAAHDALVEVSGALNTVAVS 382 (558)
Q Consensus 312 ~~~~~~l~~~~~~~~~~g~~g~~~~~~--------~~~~~~~a~~lg~~~~~~~~~~~-~~~~~d~~~~~~~~l~~~~~~ 382 (558)
.|+++||+++...++++|++||+.++. +.+.+.+++.|||. .|++| ++++||+++|++++|+.++++
T Consensus 192 ~r~~~rL~~~~~~~~~~GAvGT~~~~~~~~~~~~~~~v~~~~~~~LGl~----~n~~~~~~~~rD~~~e~~~~l~~~a~~ 267 (462)
T 2ptr_A 192 ERQYRQLNQVEILGKINGAVGNYNAHIAAYPEVDWHQFSEEFVTSLGIQ----WNPYTTQIEPHDYIAELFDCVARFNTI 267 (462)
T ss_dssp HHHHHHHHHCCCEECCCCTTSSCHHHHHHCTTSCHHHHHHHHHHHTTCE----ECCCCSSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCchhcchhhcccccCcccHHHHHHHHHHHhCCC----CCchhhhhcCCHHHHHHHHHHHHHHHH
Confidence 999999998877778889999998543 45778888889995 56677 699999999999999999999
Q ss_pred HHHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHH
Q psy10160 383 LMKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVS 462 (558)
Q Consensus 383 l~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (558)
|+|||+||++|+|+|+ |+| ..|++++|||||||||||+.+|++++.+++++|++..++..+..+++++|...|..++
T Consensus 268 L~kia~Dl~ll~s~~~--~~E-~~~~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~erd~~~~~~~~ 344 (462)
T 2ptr_A 268 LIDFDRDVWGYIALNH--FKQ-KTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLR 344 (462)
T ss_dssp HHHHHHHHHHHHHTTS--EEE-CCCTTCCSCSSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHGG
T ss_pred HHHHHHHHHHHhCCcc--hhc-cCCCCCCcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHH
Confidence 9999999999999766 666 4566899999999999999999999999999999998877666678999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhh-----hcccccChHHHHHHHHHHHH----cCCCHHHH
Q psy10160 463 NVLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVT-----ALNPHIGYDKAAKIAKTAHK----EGTTLKVA 533 (558)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~-----~la~~l~~~~a~~~~~~a~~----~~~~~~~~ 533 (558)
.++.++..+..++..+. .++++|+||++||+++++.+++++| .|++. ||++||++++++.. +|++++|+
T Consensus 345 ~l~~~~~~~~~~l~~~~-~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~l~~~-G~~~A~~iv~~~~~~~~~~~~~l~e~ 422 (462)
T 2ptr_A 345 NLGVGIGYALIAYQSTL-KGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRY-GIEKPYEKLKELTRGKRVDAEGMKQF 422 (462)
T ss_dssp GHHHHHHHHHHHHHHHH-HHHHHEEECHHHHHHHHTTCGGGGHHHHHHHHHHT-TCSSHHHHHHHC-----CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHCcCEECHHHHHHHHHcCCchHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 88888888888877666 6999999999999999999999888 55564 99999999988766 88899999
Q ss_pred HHHcCCC--CHHHHhhhcCcccccCC
Q psy10160 534 ALKLGYL--TEEEFNKWVVPEDMLGP 557 (558)
Q Consensus 534 ~~~~~~l--~~~~~~~~~~p~~~~~~ 557 (558)
+.+.+.. .+++++ +|||++|+|.
T Consensus 423 ~~~~~~~~~~~~~l~-~ldp~~~~~~ 447 (462)
T 2ptr_A 423 IDGLALPEEEKARLK-AMTPANYIGR 447 (462)
T ss_dssp HHTSSSCHHHHHHHH-TCCGGGCCTT
T ss_pred HHhcCCCcccHHHHH-hCCHHHHhCh
Confidence 9876622 367899 9999999986
No 22
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1
Probab=100.00 E-value=3.5e-49 Score=403.07 Aligned_cols=303 Identities=15% Similarity=0.132 Sum_probs=240.6
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhh-------hhhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV-------EAEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l-------~~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+ .....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 100 g~~vH~g~SsnD~~~Ta~~-l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 177 (457)
T 1tj7_A 100 GKKLHTGRSRNDQVATDLK-LWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLA-YVEMLA 177 (457)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred ccceecCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCcCCeechHHHHHHH-HHHHHH
Confidence 5678888888888777654 33333333333222 223333 8899999999999999999999998 999999
Q ss_pred chHHHHHhHhhhhhh---hcC--CCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHh
Q psy10160 313 PNDRQALNIVSIFYF---TYL--VKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIA 387 (558)
Q Consensus 313 ~~~~~l~~~~~~~~~---~g~--~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a 387 (558)
|+++||+++..+++. ||+ +|++ + +.+++++++.|||+ .+..|++||+++||+++|++++|+.++++|+|||
T Consensus 178 r~~~rL~~~~~~~~~~~lGgaA~aGt~--~-~~~~~~la~~LGl~-~~~~n~~~~~~~rD~~~e~~~~l~~~a~~L~kia 253 (457)
T 1tj7_A 178 RDESRLQDALKRLDVSPLGCGALAGTA--Y-EIDREQLAGWLGFA-SATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFA 253 (457)
T ss_dssp HHHHHHHHHHHHHCCBCTTCTTTTCCS--S-CCCHHHHHHHHTCS-SBCSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCccccccCCCC--C-CCCHHHHHHHcCCC-CCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988866655 444 2333 2 24578999999999 6889999999999999999999999999999999
Q ss_pred hhhhhhccCCCccccceecCCCC-CCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccc--cccccccchhhHHHHH
Q psy10160 388 NDIRFLASGPRCGLGELSLPENE-PGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSN--GHFELNVFKPLIVSNV 464 (558)
Q Consensus 388 ~d~~~~~s~~~~e~~e~~~~~~~-~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 464 (558)
+||++|+| .|||||++|+.+ +|||||||||||+.+|++++++++++|++.+++..+.+ .+++++... .+..
T Consensus 254 ~Di~ll~s---~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~RDl~~---~~~~ 327 (457)
T 1tj7_A 254 EDLIFFNT---GEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQE---DKEG 327 (457)
T ss_dssp HHHHHHTS---TTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCCGGGGG---HHHH
T ss_pred HHHHHHhC---CCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhhcchhh---HHhH
Confidence 99999998 679999999875 79999999999999999999999999999999766655 234444332 3344
Q ss_pred HHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhccccc---C--hHHHHH----HHHHHHHcCCCHHHHHH
Q psy10160 465 LRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHI---G--YDKAAK----IAKTAHKEGTTLKVAAL 535 (558)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l---~--~~~a~~----~~~~a~~~~~~~~~~~~ 535 (558)
+++...+...++..+..++++|+||++||++++..+++++|+|++.| | |++||+ ++++|.++|++++|++.
T Consensus 328 l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~g~~l~e~~~ 407 (457)
T 1tj7_A 328 LFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEDLPL 407 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCGGGSCH
T ss_pred HHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 44554444555555666999999999999999999999999998766 4 777776 56778889999999776
Q ss_pred Hc-C---CCCHHHHhhhcCccccc
Q psy10160 536 KL-G---YLTEEEFNKWVVPEDML 555 (558)
Q Consensus 536 ~~-~---~l~~~~~~~~~~p~~~~ 555 (558)
+. . .+.++++++++||+.++
T Consensus 408 ~~~~~~~~~~~~~l~~~ldp~~~v 431 (457)
T 1tj7_A 408 SELQKFSQVIDEDVYPILSLQSCL 431 (457)
T ss_dssp HHHTTTCTTCCTTHHHHTSHHHHH
T ss_pred HHHHHHhhhcHHHHHHhCCHHHHH
Confidence 54 2 13467899999999887
No 23
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A
Probab=100.00 E-value=4.8e-49 Score=403.24 Aligned_cols=304 Identities=15% Similarity=0.144 Sum_probs=241.8
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 106 g~~vH~g~SsnDv~~Ta~~-l~lr~~l~~l~~~L~~L~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 183 (468)
T 1k7w_A 106 AGKLHTGRSRNDQVVTDLK-LFMKNSLSIISTHLLQLIKTLVERAAIEIDVILPGYTHLQKAQPIRWSQFLLS-HAVALT 183 (468)
T ss_dssp GGGGGTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred ccceecCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCcCCccchHHHHHHH-HHHHHH
Confidence 5678998888888887755 333333333333222 22233 7899999999999999999999998 999999
Q ss_pred chHHHHHhHhhhhhh---hcCCCCChhHHHHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHHhhh
Q psy10160 313 PNDRQALNIVSIFYF---TYLVKLSELLETKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKIAND 389 (558)
Q Consensus 313 ~~~~~l~~~~~~~~~---~g~~g~~~~~~~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~a~d 389 (558)
|+++||+++..+++. ||++.++.++ +.+++++++.|||+ .+..|++||+++||+++|++++|+.++++|+|||+|
T Consensus 184 r~~~rL~~~~~~~~~~~lGgaA~aGt~~-~~~~~~la~~LG~~-~~~~n~~~~~~~rD~~~e~~~~l~~la~~L~kia~D 261 (468)
T 1k7w_A 184 RDSERLGEVKKRINVLPLGSGALAGNPL-DIDREMLRSELEFA-SISLNSMDAISERDFVVEFLSFATLLMIHLSKMAED 261 (468)
T ss_dssp HHHHHHHHHHHHHSEECTTCTTTTCCTT-CCCHHHHHHHHTCS-EECSCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcccccccCCCC-CCChHHHHHHcCCC-CCCCChHHHHHccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988766554 4442122222 25679999999999 788999999999999999999999999999999999
Q ss_pred hhhhccCCCccccceecCCCC-CCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccc--cccccccchhhHHHHHHH
Q psy10160 390 IRFLASGPRCGLGELSLPENE-PGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSN--GHFELNVFKPLIVSNVLR 466 (558)
Q Consensus 390 ~~~~~s~~~~e~~e~~~~~~~-~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 466 (558)
|++|+| .|||||++|+.+ +|||||||||||+.+|++++++++++|++.+++..+.+ .+++++...+ ...+++
T Consensus 262 l~ll~s---~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~rDl~~~--~~~l~~ 336 (468)
T 1k7w_A 262 LIIYST---SEFGFLTLSDAFSTGASLMPQKKNPDSLELIRSKAGRVFGRLASILMVLKGLPSTYNKDLQED--KEAVFD 336 (468)
T ss_dssp HHHHTS---TTTCCEECCGGGCEEETTEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCGGGGGH--HHHHHH
T ss_pred HHHHhC---CCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCchHhhhhhhhh--HhHHHH
Confidence 999998 669999999875 59999999999999999999999999999999766554 2344444332 234555
Q ss_pred HHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhhhhccccc-----ChHHHHH----HHHHHHHcCCCHHHHHHHc
Q psy10160 467 SIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLVTALNPHI-----GYDKAAK----IAKTAHKEGTTLKVAALKL 537 (558)
Q Consensus 467 ~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~~~la~~l-----~~~~a~~----~~~~a~~~~~~~~~~~~~~ 537 (558)
++..+..++ ..+..++++|+||++||+++++.+ +++|+|++.| +|++||+ ++++|.++|++++|++.+.
T Consensus 337 s~~~~~~~l-~~~~~~l~gl~vn~e~m~~~l~~~-~~at~l~~~Lv~~G~~~r~ay~~v~~~~~~a~~~g~~l~e~~~~~ 414 (468)
T 1k7w_A 337 VVDTLTAVL-QVATGVISTLQISKENMEKALTPE-MLATDLALYLVRKGVPFRQAHTASGKAVHLAETKGITINKLSLED 414 (468)
T ss_dssp HHHHHHHHH-HHHHHHHHHCEECHHHHHHTCCGG-GGHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTTTCCGGGCCHHH
T ss_pred HHHHHHHHH-HHHHHHhCCCEECHHHHHHHhhCC-ChHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 555555555 555569999999999999999999 9999998765 6677765 5677888999999987665
Q ss_pred -----CCCCHHHHhhhcCcccccC
Q psy10160 538 -----GYLTEEEFNKWVVPEDMLG 556 (558)
Q Consensus 538 -----~~l~~~~~~~~~~p~~~~~ 556 (558)
+.|+ +++++++||+.|+.
T Consensus 415 ~~~~~~~l~-~~~~~~ldp~~~~~ 437 (468)
T 1k7w_A 415 LKSISPQFS-SDVSQVFNFVNSVE 437 (468)
T ss_dssp HHHHCTTCC-GGGGGGSCHHHHHT
T ss_pred HHHHHHhhH-HHHHHhCCHHHHHh
Confidence 7776 68999999999884
No 24
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A
Probab=100.00 E-value=3.9e-47 Score=389.37 Aligned_cols=305 Identities=15% Similarity=0.115 Sum_probs=236.3
Q ss_pred ceeeecccceeEEEEeccCCCCCCCccc-ccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGP-HIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~-w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
+.++|.|.+++|+..++.. ...+..+. .+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 113 ~~~iH~g~SsnDv~~Ta~~-L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l 190 (465)
T 2qga_B 113 KEYVHYLCTSEDINNVAYA-TCLKACLNDVVIPCLEKIMLKLKDLAVEYSHVPLLSRTHGQPASSTTFGKEMAN-FYARI 190 (465)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred hhhccCCCChhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcEeeccccCcccccchHHHHHHH-HHHHH
Confidence 6789999999998888765 44444443 2332222 22233 8899999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhhhhhcCCCCChhHH---H------HHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIFYFTYLVKLSELLE---T------KCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVS 382 (558)
Q Consensus 312 ~~~~~~l~~~~~~~~~~g~~g~~~~~~---~------~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~ 382 (558)
.|+++||+++.....++|++||++++. + ..++.+++.|||+..+.. +++++||+++|++++|+.++++
T Consensus 191 ~r~~~rL~~~~~~~~~~GAvGT~~a~~~~~p~~d~~~~~~~~~~~~LGl~~~~~~---~~~~~rD~~~e~~~~l~~~a~~ 267 (465)
T 2qga_B 191 HHHVGVIRRVKVCAKFNGAVGNFNAHKVASKDTDWVNTIGLFLKKHFNLTYSIYC---TQIQDHDYICELCDGLARANGT 267 (465)
T ss_dssp HHHHHHHHHSCCEECCCCTTSSCHHHHHHCTTCCHHHHHHHHHHHHHCCEECCCC---SSSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhcCccccccccCcccHHHHHHHHHHHHhCCCCCCCc---cchhccHHHHHHHHHHHHHHHH
Confidence 999999998886667788999987554 2 345555556999866544 5799999999999999999999
Q ss_pred HHHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHH
Q psy10160 383 LMKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVS 462 (558)
Q Consensus 383 l~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (558)
|+|||+||++|+| .|+.+...+++++|||||||||||+.+|++++.++.+.+....++..+..++++++...+..++
T Consensus 268 L~kia~Di~ll~s---~~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~~~~~~~~~~~~~l~~~~~erdl~~s~~~r 344 (465)
T 2qga_B 268 LIDLCVDIWLYIS---NNLLKLKVKEKEVGSSTMPHKVNPIDFENAEGNLHIANAFFKLFSSKLPTSRLQRDLSDSTVLR 344 (465)
T ss_dssp HHHHHHHHHHHHH---TTSEEEC-------CCSCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTBCTHHHHHHT
T ss_pred HHHHHHHHHHHhC---CcceeeeCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhhh
Confidence 9999999999997 5665555566899999999999999999999999999999887776665567888877776566
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh-----hhcccccChHHHHHHHHHHHHcCC-----CHHH
Q psy10160 463 NVLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV-----TALNPHIGYDKAAKIAKTAHKEGT-----TLKV 532 (558)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~-----~~la~~l~~~~a~~~~~~a~~~~~-----~~~~ 532 (558)
.++..+..+..++ ..+.+++++|+||+++|+++++.+++++ +.|++. ||++||++++++.. +. ++.+
T Consensus 345 ~l~~~~~~~~~~l-~~~~~~l~~l~vn~~~m~~~l~~~~~~~ae~v~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~ 421 (465)
T 2qga_B 345 NIGSSLAYCLIAY-KSVLKGLNKIDIDRRNLEEELNQNWSTLAEPIQIVMKRH-NYVDAYEELKQFTR-GKVIDQKIMQE 421 (465)
T ss_dssp THHHHHHHHHHHH-HHHHHHHHHEEECHHHHHHHHHTCGGGGHHHHHHHHHHT-TCSCHHHHHHHHHT-TSCCCHHHHHH
T ss_pred hHHHHHHHHHHHH-HHHHHHHccCEECHHHHHHHHHcCCChHHHHHHHHHHHh-ChHHHHHHHHHHHh-hhhhccCCHHH
Confidence 6555554444444 4446799999999999999999988775 667766 99999999998775 33 3455
Q ss_pred HHHHcC-CCCH---HHHhhhcCcccccCC
Q psy10160 533 AALKLG-YLTE---EEFNKWVVPEDMLGP 557 (558)
Q Consensus 533 ~~~~~~-~l~~---~~~~~~~~p~~~~~~ 557 (558)
++.+.. .+++ ++|+ +|||.+|+|.
T Consensus 422 ~~~~~~~~~~~~~~~~l~-~ldp~~y~G~ 449 (465)
T 2qga_B 422 FIKTKCAFLPQDVVDQLL-ELTPATYTGY 449 (465)
T ss_dssp HHHHHSTTSCHHHHHHHH-HCCGGGCCTT
T ss_pred HHHhchhcCCcchHHHHH-hcCHHHhCCc
Confidence 555543 4777 7898 9999999986
No 25
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp}
Probab=100.00 E-value=5.6e-45 Score=372.80 Aligned_cols=304 Identities=17% Similarity=0.132 Sum_probs=236.0
Q ss_pred ceeeecccceeEEEEeccCCCCCCCccc-ccchhhh-------hhhhh-hhhhhcccccchhhhhhhHHHhhcccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGP-HIKRAVE-------AEAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNL 311 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~-w~~~~l~-------~~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l 311 (558)
+.++|.|.+++|+..++.. ...+..+. .+...+. ....+ ++++|.||||+|+|+|+|+||++++ |++.|
T Consensus 117 ~~~iH~g~SsnDv~~Ta~~-L~lr~~l~~~l~~~L~~l~~~L~~~A~~~~~~~m~GrTHlQ~A~P~T~G~~~~~-~~~~l 194 (459)
T 3bhg_A 117 VAFIHFACTSEDINNLAYA-LMIKQAIAQVIQPTIAEIMGSITLLGKQHADVAMLSRTHGQPATPTTMGKELVN-FVARL 194 (459)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHTTTCEEEEEETTEEEEEEEHHHHHHH-HHHHH
T ss_pred hhhhcCCCCHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCEeeccccCccceechHHHHHHH-HHHHH
Confidence 6788999999998887765 34444443 2332222 22233 8899999999999999999999998 99999
Q ss_pred cchHHHHHhHhhhhhhhcCCCCChhHH--------HHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHH
Q psy10160 312 DPNDRQALNIVSIFYFTYLVKLSELLE--------TKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSL 383 (558)
Q Consensus 312 ~~~~~~l~~~~~~~~~~g~~g~~~~~~--------~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l 383 (558)
.|+++||+++.....++|++||++++. +.+.+++++.|||...+.+| ++++||+++|++++|+.++++|
T Consensus 195 ~r~~~rL~~~~~~~~~~GAvGT~~a~~~~~~~~~~~~~~~~~~~~LGl~~~~~~~---~~~~rD~~~e~~~~l~~~a~~L 271 (459)
T 3bhg_A 195 KRPQQQLAEVLIPAKFNGAVGNYNAHVAAYPEVDWRKHCANFVTSLGLSFNAYTT---QIEPHDGIAEVSQIMVRINNIL 271 (459)
T ss_dssp HHHHHHHHHCCCEECCCCSSSSCHHHHHHCTTSCHHHHHHHHHHHTTCEECSSCS---SSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccccccccccccccccCcccHHHHHHHHHHHhCCCCCcccc---chhcCHHHHHHHHHHHHHHHHH
Confidence 999999998886777788999988654 45777788889998655554 6899999999999999999999
Q ss_pred HHHhhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHH
Q psy10160 384 MKIANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSN 463 (558)
Q Consensus 384 ~k~a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (558)
+|||+||++|+| .|+.+...+++++|||||||||||+.+|++++.++.+.+....++..+..++++++...+..++.
T Consensus 272 ~kia~Di~ll~s---~~~~~e~~~~~~~GSSiMP~K~NP~~~e~~~g~~~l~~~~~~~~~~~l~~~~~~rdl~~s~~~r~ 348 (459)
T 3bhg_A 272 LDYTQDIWSYIS---LGYFKQKTIAEEVGSSTMPHKVNPIDFENAEGNLGLSNALFIHFANKLTQSRMQRDLSDSTVLRN 348 (459)
T ss_dssp HHHHHHHHHHHH---TTSEEECC------CCSSCCCCCTHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCTHHHHHHTT
T ss_pred HHHHHHHHHHhC---CcceehccCCCCCCCCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhhhh
Confidence 999999999998 46644445567999999999999999999999999999988777665545667888776655555
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCcccCHHHHHHHHhhhHhhh-----hhcccccChHHHHHHHHHHHHcCC-----CHHHH
Q psy10160 464 VLRSIRLIADSATAFTDKCVSGIVANEENIHRLLHESLMLV-----TALNPHIGYDKAAKIAKTAHKEGT-----TLKVA 533 (558)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~~~~~~~~~-----~~la~~l~~~~a~~~~~~a~~~~~-----~~~~~ 533 (558)
++..+..+..++ ..+.+++++|+||++||+++++.+++++ +.|++. ||++||++++++.. |. +++++
T Consensus 349 l~~~~~~~~~~l-~~~~~~l~gl~vn~e~m~~~l~~~~~~~te~~~~~L~~~-G~~~A~~iv~~~~~-~~~~~~~~l~~~ 425 (459)
T 3bhg_A 349 LGVAFSYSLIAY-HSVAKGNDKLQINKSALQKDLSENWEVLAEAIQTVMRRY-NEPNAYEQLKELTR-GQMIDAENLKKF 425 (459)
T ss_dssp HHHHHHHHHHHH-HHHHHHHTTEEECHHHHHHHHHTCGGGGHHHHHHHHHHT-TCTTHHHHHHHHHT-TSCCCHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHCcCEECHHHHHHHHHcCCchHHHHHHHHHHHh-ChHHHHHHHHHHHh-hcccccccHHHH
Confidence 555554454443 4456799999999999999999999888 455555 99999999999877 43 46777
Q ss_pred HHHcCCCC---HHHHhhhcCcccccCC
Q psy10160 534 ALKLGYLT---EEEFNKWVVPEDMLGP 557 (558)
Q Consensus 534 ~~~~~~l~---~~~~~~~~~p~~~~~~ 557 (558)
+.+.. ++ .++|+ +|||..|+|.
T Consensus 426 l~~l~-~~~~~~~~l~-~~dp~~y~g~ 450 (459)
T 3bhg_A 426 IKTLS-IPEEAKAELM-KLTPETYTGL 450 (459)
T ss_dssp HHTSC-SCHHHHHHHH-HCCGGGCCTT
T ss_pred HHhcC-CCchhHHHHH-hCCHHHHhCc
Confidence 76643 33 36787 8999999986
No 26
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A
Probab=100.00 E-value=5.5e-43 Score=345.75 Aligned_cols=243 Identities=17% Similarity=0.099 Sum_probs=196.7
Q ss_pred ceeeecccceeEEEEeccCCCCCCCcccccchhhhh-------hhhh-hhhhhcccccchhhhhhhHHHhhccccccccc
Q psy10160 241 GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA-------EAAA-ADKKRRSRRSLSVVNKWSLRQAFTTCYPVNLD 312 (558)
Q Consensus 241 ~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~-------~~~~-~~~~~~grth~q~a~~~t~g~~~~~~~~~~l~ 312 (558)
+.++|.|.+++|+..++.. ...+..+..+...+.. ...+ ++++|.||||+|+|+|+|+||++++ |++.|.
T Consensus 99 ~~~vH~G~SsnDv~~Ta~~-l~lr~~l~~l~~~L~~l~~~L~~~A~~~~~~~~~GrTHlQ~A~P~T~G~~~~~-~~~~l~ 176 (359)
T 2fel_A 99 ADKVHFGATSQDVIDTSLM-LRLKMAAEIIATRLGHLIDTLGDLASRDGHKPLTGYTRMQAAIGITVADRAAG-WIAPLE 176 (359)
T ss_dssp GGGTTTTCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEHHHHHHH-HHHHHH
T ss_pred cchhcCCCCHhhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcEeeccccCcccccchHHHHHHH-HHHHHH
Confidence 6788999999988887765 3444443333333222 2233 8899999999999999999999998 999999
Q ss_pred chHHHHHhHh---hhhhhhcCCCCChhHH---HHHHHHHHhHhCCCcccCCChhHHhhcCcHHHHHHHHHHHHHHHHHHH
Q psy10160 313 PNDRQALNIV---SIFYFTYLVKLSELLE---TKCAAKIAELTGLPFKSAPNKFEALAAHDALVEVSGALNTVAVSLMKI 386 (558)
Q Consensus 313 ~~~~~l~~~~---~~~~~~g~~g~~~~~~---~~~~~~~a~~lg~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~~l~k~ 386 (558)
|+++||+++. ..++++|++||++.++ +.+++++++.|||+... +++++||+++|++++|+.++++|+||
T Consensus 177 r~~~rL~~~~~~~~~~~lGgavGT~~~~~~~~~~~~~~~a~~LG~~~~~-----~~~~~RD~~~e~~~~l~~~a~~L~ki 251 (359)
T 2fel_A 177 RHLLRLETFAQNGFALQFGGAAGTLEKLGDNAGAVRADLAKRLGLADRP-----QWHNQRDGIAEFANLLSLVTGTLGKF 251 (359)
T ss_dssp HHHHHHHHHHHHCSBCCCCCTTSSCTTTGGGHHHHHHHHHHHHTCBCCC-----CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCcHHhccCccCcchHHHHHHHHHHHhCcCCCc-----hHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877 5567788999988874 68999999999999654 36899999999999999999999999
Q ss_pred hhhhhhhccCCCccccceecCCCCCCCCCCCCCCCchHHHHHHHHHHHHHcccHHHHhhccccccccccchhhHHHHHHH
Q psy10160 387 ANDIRFLASGPRCGLGELSLPENEPGSSIMPGKVNPTQCEALTMVAAQVMGNHVAVTIGGSNGHFELNVFKPLIVSNVLR 466 (558)
Q Consensus 387 a~d~~~~~s~~~~e~~e~~~~~~~~gSS~MP~K~NP~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (558)
|+||++|+| +| ||+.+|+ ++|||||||||||+.+|+++++++++.|++.+++ ....+|+|+++..|..+|..+|
T Consensus 252 a~Dirll~s---~e-~Ei~~~~-~~GSS~MP~K~NP~~~E~i~~~a~~v~~~~~~~~-~~~~~~~er~~~~~~~e~~~lp 325 (359)
T 2fel_A 252 GQDIALMAE---IG-SEIRLSG-GGGSSAMPHKQNPVNAETLVTLARFNAVQISALH-QSLVQEQERSGAGWMLEWLTLP 325 (359)
T ss_dssp HHHHHHHHH---HC-TTEEEC-------------CCHHHHHHHHHHHHHHHHHHHHH-HTTCCCSSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhC---CC-CeecCCC-CCCCccCCcccCCHHHHHHHHHHHHHHHHHHHHH-HHhhccCCCCCcccHHHHHHHH
Confidence 999999997 89 9999996 5999999999999999999999999999999886 4556789999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCcccCHHHHHHH
Q psy10160 467 SIRLIADSATAFTDKCVSGIVANEENIHRL 496 (558)
Q Consensus 467 ~~~~~~~~~~~~~~~~l~~l~v~~~~~~~~ 496 (558)
+++.+.++++..+..++++|+||++||..+
T Consensus 326 ~~~~~~~~~L~~~~~v~~~l~v~~~~m~~~ 355 (359)
T 2fel_A 326 QMVTATGTSLLVAERLAAQIDRLGADESHH 355 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHccCEECHHHhCcc
Confidence 999999999999999999999999999865
No 27
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.94 E-value=1.3e-25 Score=241.09 Aligned_cols=276 Identities=19% Similarity=0.182 Sum_probs=199.2
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCC-C-CccccC-ceeEEeccCCCCCCcEEEEeCCcc
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVAD-P-NAIDYG-TILSSAFPSESASPVVTQTTTTTT 88 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~-~-~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~ 88 (558)
.++|.|.+++.+|+|.|+|.|.|..|... ++.|.|..+|.+.... + ..+.+| ...+.|...+.|.|.+.|++++..
T Consensus 252 ~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~ 331 (570)
T 3b43_A 252 TATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETE 331 (570)
T ss_dssp EEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEE
T ss_pred EEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEE
Confidence 36899999999999999999999999764 6667666666543322 2 224444 566899999999999999999988
Q ss_pred cCCCCceeecc---ccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeecc
Q psy10160 89 EATSPHVYAAL---THCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGY 156 (558)
Q Consensus 89 ~~~~~~~~~g~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~ 156 (558)
+..+.+..... ...+ .-.|.|.+.|..+.......+.+..||.+...+....+.+|+.+.|.|.+.|.
T Consensus 332 l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~ 411 (570)
T 3b43_A 332 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGT 411 (570)
T ss_dssp CCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESS
T ss_pred CCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecC
Confidence 77665432111 1111 23567888888887777777788889999888888889999999999999999
Q ss_pred CCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccc
Q psy10160 157 PIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFA 233 (558)
Q Consensus 157 P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~ 233 (558)
|.|.+.|+|++..+..+. ++.+..+ ++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+ |.+...+.
T Consensus 412 P~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~---P~~~~~~~-- 485 (570)
T 3b43_A 412 PPFQVSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAP---PRFVKKLS-- 485 (570)
T ss_dssp SSCCCEEEETTEECCSSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC---CEEEECCC--
T ss_pred CCCEEEEEECCEECcCCC-CEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccC---CcccccCC--
Confidence 999999999999987654 5544333 37999999999999999999999999999999999644 33322111
Q ss_pred cceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhh--h---hcccccchhhhhhhHHHhhc
Q psy10160 234 NCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADK--K---RRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~--~---~~grth~q~a~~~t~g~~~~ 304 (558)
+ ..+.. +......|.+.|.|++.+.|++++.......... . ..+..++..+.+...|.|..
T Consensus 486 ~-------~~~~~---g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 551 (570)
T 3b43_A 486 D-------ISTVV---GEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTC 551 (570)
T ss_dssp C-------BCCBT---TCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEE
T ss_pred C-------ceecC---CCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEE
Confidence 1 11122 2333345566699999999999974433222111 1 12345566677777777665
No 28
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.92 E-value=3e-24 Score=230.41 Aligned_cols=276 Identities=19% Similarity=0.234 Sum_probs=193.7
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeC--CCCccCCCCc--ccc-CceeEEeccCCCCCCcEEEEeCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQAL--PSEKVADPNA--IDY-GTILSSAFPSESASPVVTQTTTT 86 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~--p~~~~~~~~~--v~~-~~~~~~~~~~~~p~p~v~W~~~~ 86 (558)
.++|.|.+++.+|+|.|+|.|.|..|... +..+.|... |+.....+.. +.. ..+.+.|...+.|+|.++|++++
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g 235 (570)
T 3b43_A 156 VATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN 235 (570)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETT
T ss_pred EEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECC
Confidence 46899999999999999999999998764 566766543 3333333332 334 46678999999999999999999
Q ss_pred cccCCCCceeec---cccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCC-ceEeeCCCcEEEEeEe
Q psy10160 87 TTEATSPHVYAA---LTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLE-TQVFGVGSDISIPCDV 153 (558)
Q Consensus 87 ~~~~~~~~~~~g---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~v~~G~~v~L~C~~ 153 (558)
..+..+.+.... ....+ .-.|.|.+.|..+.......+.+..||.+..... ...+.+|+.+.|.|.+
T Consensus 236 ~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~ 315 (570)
T 3b43_A 236 REIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI 315 (570)
T ss_dssp EECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEE
T ss_pred EECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEE
Confidence 887665443211 11111 2246788888877777777777777887765543 4457899999999999
Q ss_pred eccCCCeEEEEECCEEeccCCceEEEc---cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCC
Q psy10160 154 DGYPIPQVFWYKDGQVIENDGVHYRIT---ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLP 230 (558)
Q Consensus 154 ~g~P~p~i~W~~~g~~l~~~~~~~~~~---~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~ 230 (558)
.|.|.|.+.|+|++..+..+. ++.+. ..+.|.|.+++.+|+|.|+|.|.|..|....++.|.|..+| .+...+
T Consensus 316 ~g~P~p~v~W~k~~~~l~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P---~~~~~~ 391 (570)
T 3b43_A 316 GGSPEIKVLWYKDETEIQESS-KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPP---VFRKKP 391 (570)
T ss_dssp ESSSSCEEEEEETTEECCCSS-SEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCC---EECSCC
T ss_pred eeCCCCEEEEeECCEECCCCC-cEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCC---eeecCC
Confidence 999999999999999987654 33322 23579999999999999999999999999999999997543 333222
Q ss_pred ccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-hhhhhc---ccccchhhhhhhHHHhhc
Q psy10160 231 LFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-ADKKRR---SRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 231 ~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~~~~~~---grth~q~a~~~t~g~~~~ 304 (558)
. . ... .. +......|.+.|.|+|.+.|++++....... ..+... +..++..+.....|.|..
T Consensus 392 ~--~-~~~------~~---G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 457 (570)
T 3b43_A 392 H--P-VET------LK---GADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC 457 (570)
T ss_dssp C--C-EEE------CT---TCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred C--c-eee------cC---CCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEE
Confidence 1 1 111 12 2333355666699999999999986654332 111111 234566677777776655
No 29
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.92 E-value=3.3e-24 Score=219.58 Aligned_cols=283 Identities=17% Similarity=0.170 Sum_probs=183.1
Q ss_pred CceE-ecCCeEEEcCC-----CCCCCEEEEEEEEeCC-cceEE--EEEEEEeCCCCccCCC-CccccC-ceeEEeccCCC
Q psy10160 7 ENYE-LNKNMLTIKRV-----EPERLGAYTCQAYNGL-GRAVS--WTVTLQALPSEKVADP-NAIDYG-TILSSAFPSES 75 (558)
Q Consensus 7 ~r~~-~~~~~L~I~~v-----~~~D~G~Y~C~a~n~~-g~~~s--~~l~V~~~p~~~~~~~-~~v~~~-~~~~~~~~~~~ 75 (558)
.++. ..+++|.|.++ +.+|+|.|+|.+.|.. +...+ ..+.|..++.....+. ..+..| .+.+.|...+.
T Consensus 69 ~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~ 148 (403)
T 3laf_A 69 DRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGD 148 (403)
T ss_dssp TTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECS
T ss_pred ccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEccc
Confidence 3443 46789999988 6789999999999754 33333 3444433333222222 223444 56688888889
Q ss_pred CCCcEEEEeCCcccCCC---Cce----------------eeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecC
Q psy10160 76 ASPVVTQTTTTTTEATS---PHV----------------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITL 136 (558)
Q Consensus 76 p~p~v~W~~~~~~~~~~---~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 136 (558)
|.|.+.|++++..+... .+. ..|.|.|.+.+...........+..........++.+...+
T Consensus 149 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~ 228 (403)
T 3laf_A 149 PMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRP 228 (403)
T ss_dssp SCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECC
T ss_pred CCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCC
Confidence 99999999998766321 111 14455555443322111111122222211112233455667
Q ss_pred CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
....+.+|+.+.|.|.+.|.|.|.+.|++++..+.....++....+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.
T Consensus 229 ~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 308 (403)
T 3laf_A 229 SNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELT 308 (403)
T ss_dssp CCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred CceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEE
Confidence 77888999999999999999999999999999987766677777788999999999999999999999999999999999
Q ss_pred EeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-hhhhhcccccchhhh
Q psy10160 217 VEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-ADKKRRSRRSLSVVN 295 (558)
Q Consensus 217 V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~~~~~~grth~q~a~ 295 (558)
|..++ .+...+ .. ..+.. +......|.+.|.|+|.+.|++++....... ......+..++..+.
T Consensus 309 V~~~p---~~~~~~--~~-------~~~~~---g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~ 373 (403)
T 3laf_A 309 VLVPP---WFLNHP--SN-------LYAYE---SMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVV 373 (403)
T ss_dssp EEEEE---EEEECC--CC-------EECCT---TCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCC
T ss_pred EECCC---cEeecC--cc-------eEEec---CCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccc
Confidence 97543 211111 00 01112 3334466777789999999999986654333 222223445555566
Q ss_pred hhhHHHhhc
Q psy10160 296 KWSLRQAFT 304 (558)
Q Consensus 296 ~~t~g~~~~ 304 (558)
....|.|..
T Consensus 374 ~~d~G~Y~C 382 (403)
T 3laf_A 374 KSDEGFYQC 382 (403)
T ss_dssp GGGCEEEEE
T ss_pred cccCEEEEE
Confidence 666665554
No 30
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.92 E-value=2.8e-23 Score=202.07 Aligned_cols=205 Identities=21% Similarity=0.236 Sum_probs=159.8
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCC--ccccC-ceeEEeccCCCCCCcEEEEeCCcc
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPN--AIDYG-TILSSAFPSESASPVVTQTTTTTT 88 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~--~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~ 88 (558)
+++|.|.+++.+|+|.|+|.+.|..|... +..+.|..+|......+. .+..| .+.+.|...+.|.|.+.|++++..
T Consensus 60 ~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~ 139 (284)
T 2rik_A 60 TATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETE 139 (284)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEE
T ss_pred EEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEE
Confidence 46899999999999999999999988764 667777776655443332 24444 566899999999999999999887
Q ss_pred cCCCCceeecc---cc---------ceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeecc
Q psy10160 89 EATSPHVYAAL---TH---------CVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGY 156 (558)
Q Consensus 89 ~~~~~~~~~g~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~ 156 (558)
+.......... .. ...-.|.|.+.+..+.......+.+..||.+...+....+.+|+.+.|.|.+.|.
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~ 219 (284)
T 2rik_A 140 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGT 219 (284)
T ss_dssp CCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSS
T ss_pred CcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEec
Confidence 76654432110 00 1122456777777766666666777788888888888889999999999999999
Q ss_pred CCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 157 PIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 157 P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|.|.+.|++++..+.... ++.+..+ .+|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 220 p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 220 PPFQVSWHKDKRELRSGK-KYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp SCCEEEEEETTEEECBTT-TEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCEEEEEECCEECcCCC-CEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 999999999999987654 4443333 379999999999999999999999999999999885
No 31
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.92 E-value=7e-24 Score=215.99 Aligned_cols=282 Identities=16% Similarity=0.145 Sum_probs=174.8
Q ss_pred CCceEecCCeEEEcCC-CCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCC--CccccC-ceeEEeccC-CCCCC
Q psy10160 6 SENYELNKNMLTIKRV-EPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADP--NAIDYG-TILSSAFPS-ESASP 78 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v-~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~--~~v~~~-~~~~~~~~~-~~p~p 78 (558)
+.++...+++|.|.++ +.+|+|.|+|.|.|..|... ...+.+...+......+ ..+..| ...+.|... +.|.+
T Consensus 54 ~~~~~~~~g~l~i~~~~~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~ 133 (384)
T 3kld_A 54 DFRYSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGEL 133 (384)
T ss_dssp --CEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCE
T ss_pred CccEEEECCEEEEcCCCCcccCEEEEEEEEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCe
Confidence 3466777888988887 78999999999999999764 45566655554433332 234444 455667543 45778
Q ss_pred cEEEEeCCcccCCCCce-----------------eeccccceeeceeEEee--ccceeeEEeee-ceeeeCcEE-EecCC
Q psy10160 79 VVTQTTTTTTEATSPHV-----------------YAALTHCVPWSNVCLFG--ARSGYLKETQN-GGYLVPVKV-NITLE 137 (558)
Q Consensus 79 ~v~W~~~~~~~~~~~~~-----------------~~g~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~p~~~-~~~~~ 137 (558)
.+.|++++.......+. ..|.|.|.+.+...... .....+..... .....+|.+ ...+.
T Consensus 134 ~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~ 213 (384)
T 3kld_A 134 SYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPE 213 (384)
T ss_dssp EEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCS
T ss_pred EEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCC
Confidence 99999987655433222 14455555443211100 00001111100 011123333 33455
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECC-EEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDG-QVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g-~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
...+.+|+.+.|.|.+.|+|.|.+.|+|++ ..+... ......+++|.|.+++.+|+|.|+|.|.|..|.......|.
T Consensus 214 ~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 291 (384)
T 3kld_A 214 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK--ARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLT 291 (384)
T ss_dssp EEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT--CEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc--ceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEE
Confidence 677899999999999999999999999954 444432 22234567899999999999999999999999999889999
Q ss_pred EeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhhhh
Q psy10160 217 VEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVVNK 296 (558)
Q Consensus 217 V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a~~ 296 (558)
|..+| .+...+ .+ ..+..|. .....|.+.|.|+|.+.|++++..+.....-....+...+..+..
T Consensus 292 v~~~P---~~~~~~--~~-------~~v~~g~---~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~i~~v~~ 356 (384)
T 3kld_A 292 FYAQP---NWVQII--ND-------IHVAMEE---SVFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNL 356 (384)
T ss_dssp EEEEE---EEEECC--CC-------EEECTTC---CEEEECEEEEESCCEEEEEETTEECCCBTTEEEETTEEEESSCCG
T ss_pred EecCC---ccccCC--Cc-------eEecCCC---CEEEEeECCccCCCeEEEEECCEECCCCccEEEeCCEEEEeecCh
Confidence 86543 222111 11 1122222 333556667999999999999866543322222334556666666
Q ss_pred hhHHHhhc
Q psy10160 297 WSLRQAFT 304 (558)
Q Consensus 297 ~t~g~~~~ 304 (558)
...|.|..
T Consensus 357 ~D~G~Y~C 364 (384)
T 3kld_A 357 SDAGMYQC 364 (384)
T ss_dssp GGCEEEEE
T ss_pred hhCEEEEE
Confidence 66666554
No 32
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=222.16 Aligned_cols=244 Identities=11% Similarity=0.023 Sum_probs=148.7
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCcc-ccCceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAI-DYGTILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v-~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
+|.|.+++.+|+|.|+|.|.|..|... .+.|.|...|......|..+ .++...+.|.+.|.|.|.|+|++++......
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~ 183 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESC 183 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccc
Confidence 699999999999999999999988763 44555543333221223222 3445678999999999999999987644221
Q ss_pred Cc-----eee---ccccceeeceeEEeeccceeeEEe-eeceeeeCcEEEecCCceEeeCCCcEEEEeEeec-cCCCeEE
Q psy10160 93 PH-----VYA---ALTHCVPWSNVCLFGARSGYLKET-QNGGYLVPVKVNITLETQVFGVGSDISIPCDVDG-YPIPQVF 162 (558)
Q Consensus 93 ~~-----~~~---g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p~i~ 162 (558)
.. ... .......-.|.|.+.|..+..... ..+.+..+|.+ .+....+.+|+.+.|.|.+.| .|.|.|.
T Consensus 184 ~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~ 261 (423)
T 3qs7_E 184 KEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLT 261 (423)
T ss_dssp ------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEE
T ss_pred cccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEE
Confidence 00 000 000001113455666655543321 22223233332 445677899999999999999 7789999
Q ss_pred EEECCEEeccCCceE---E------EccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccc
Q psy10160 163 WYKDGQVIENDGVHY---R------ITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFA 233 (558)
Q Consensus 163 W~~~g~~l~~~~~~~---~------~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~ 233 (558)
|+|++..+.... .+ . ...+++|.|.+++.+|+|.|+|.|.|. .+..+.|.|..++ .+...+...
T Consensus 262 W~k~g~~l~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p---~i~~~~~~~ 334 (423)
T 3qs7_E 262 WELENKALEEGN-YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKG---FINATNSSE 334 (423)
T ss_dssp EEESSSBCCGGG-EEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSC---EEEEC---C
T ss_pred EEECCEEccccc-eeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCC---cceEcCCCc
Confidence 999998775431 11 0 122347999999999999999999998 6778888886543 111111100
Q ss_pred cceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 234 NCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 234 ~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
. ..+..|.... ..|.+.|.|+|.+.|++++..+.
T Consensus 335 --~-----~~v~~G~~v~---l~C~~~g~P~p~i~W~k~g~~l~ 368 (423)
T 3qs7_E 335 --D-----YEIDQYEEFC---FSVRFKAYPQIRCTWTFSRKSFP 368 (423)
T ss_dssp --E-----ECCCTTCCCC---EEEEEEEESCCEEEEEETTEEEE
T ss_pred --c-----EEecCCCeEE---EEEEEEEcCCCeEEEEECCEECC
Confidence 1 1122333344 44556689999999999986653
No 33
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.91 E-value=6e-23 Score=209.08 Aligned_cols=205 Identities=20% Similarity=0.280 Sum_probs=152.1
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE----EEEEEEE-------eCCCCccCCCCc--cccC-ceeEEeccCCCCC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV----SWTVTLQ-------ALPSEKVADPNA--IDYG-TILSSAFPSESAS 77 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~----s~~l~V~-------~~p~~~~~~~~~--v~~~-~~~~~~~~~~~p~ 77 (558)
.+++|.|.+++.+|+|.|+|.|.|..+... ...+.+. ..|......+.. +..| .+.+.|.+.+.|.
T Consensus 155 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~ 234 (384)
T 3kld_A 155 ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPV 234 (384)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESC
T ss_pred CCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCC
Confidence 567899999999999999999999887642 1222222 112222222322 3344 6678999999999
Q ss_pred CcEEEEeCCc-ccCCCCceee--------ccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEE
Q psy10160 78 PVVTQTTTTT-TEATSPHVYA--------ALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDIS 148 (558)
Q Consensus 78 p~v~W~~~~~-~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~ 148 (558)
|.+.|++++. .+....+... .......-.|.|.+.|..+.......+.+..+|.+...+....+.+|+.+.
T Consensus 235 p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~ 314 (384)
T 3kld_A 235 PTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVF 314 (384)
T ss_dssp CEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEE
T ss_pred CcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEE
Confidence 9999999654 3332211110 001111224577777777777666677777888888888888999999999
Q ss_pred EEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 149 IPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 149 L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|.|.+.|.|.|.|.|+|+|..+..+. ++.+ .+++|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 315 l~C~~~g~P~p~i~W~k~g~~l~~~~-~~~~-~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 315 WECKANGRPKPTYRWLKNGDPLLTRD-RIQI-EQGTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EECEEEEESCCEEEEEETTEECCCBT-TEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEeECCccCCCeEEEEECCEECCCCc-cEEE-eCCEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 99999999999999999999987644 5554 46799999999999999999999999999999999985
No 34
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.90 E-value=2.5e-23 Score=211.57 Aligned_cols=280 Identities=15% Similarity=0.131 Sum_probs=180.7
Q ss_pred CCceEecCCeEEEcCCCC-CCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCC--CccccC-ceeEEecc-CCCCCC
Q psy10160 6 SENYELNKNMLTIKRVEP-ERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADP--NAIDYG-TILSSAFP-SESASP 78 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~--~~v~~~-~~~~~~~~-~~~p~p 78 (558)
..++.+.+++|.|.++.. +|+|.|+|.+.|..|... ...+.|...+......+ ..+..| .+.+.|.. .+.|.+
T Consensus 53 ~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~ 132 (382)
T 1cs6_A 53 DSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPAL 132 (382)
T ss_dssp TSSEEEETTEEEEESCCHHHHCEEEEEEEEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCC
T ss_pred CccEEeeCCeEEEecccccccCEEEEEEEEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCc
Confidence 457788889999999997 999999999999988764 46667766655443332 234444 55677874 456889
Q ss_pred cEEEEeCCcccC--CCCce-----------------eeccccceeecee----EEeeccceeeEEeeeceeeeCcEEEe-
Q psy10160 79 VVTQTTTTTTEA--TSPHV-----------------YAALTHCVPWSNV----CLFGARSGYLKETQNGGYLVPVKVNI- 134 (558)
Q Consensus 79 ~v~W~~~~~~~~--~~~~~-----------------~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~- 134 (558)
.+.|++++.... ...+. ..|.|.|.+.+.. .........+..........+|.+..
T Consensus 133 ~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~ 212 (382)
T 1cs6_A 133 SYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAK 212 (382)
T ss_dssp EEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEEC
T ss_pred EEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceecc
Confidence 999999986542 11111 1455666555443 11111111111111111223454444
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
.+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ...+++|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 213 ~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 288 (382)
T 1cs6_A 213 FPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKW----LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGR 288 (382)
T ss_dssp CCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCCC----SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccEE----ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 4567778999999999999999999999999887764311 134568999999999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhh
Q psy10160 215 IRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVV 294 (558)
Q Consensus 215 l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a 294 (558)
|.|..++ .+...+ .. . .+.. +......|.+.|.|+|.+.|++++.......+-....+..++..+
T Consensus 289 l~V~~~p---~~~~~~--~~-~------~~~~---g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~L~i~~v 353 (382)
T 1cs6_A 289 IIIHAQP---DWLDVI--TD-T------EADI---GSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKL 353 (382)
T ss_dssp EEEEEEE---EEEECC--CC-E------EEET---TCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEETTEEEESSC
T ss_pred EEEecCC---CcccCC--Cc-c------EEcC---CCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEECCEEEECcC
Confidence 9997543 221111 11 1 1122 333445666678999999999997654433221122344555555
Q ss_pred hhhhHHHhhc
Q psy10160 295 NKWSLRQAFT 304 (558)
Q Consensus 295 ~~~t~g~~~~ 304 (558)
.....|.|..
T Consensus 354 ~~~d~G~Y~C 363 (382)
T 1cs6_A 354 VLEDSGMYQC 363 (382)
T ss_dssp CGGGCEEEEE
T ss_pred CcccCEEEEE
Confidence 5555555443
No 35
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.90 E-value=4.6e-22 Score=194.06 Aligned_cols=206 Identities=20% Similarity=0.284 Sum_probs=143.1
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEe--CCCCccCC-CCccccC-ceeEEeccCCCCCCcEEEEeCCcc
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQA--LPSEKVAD-PNAIDYG-TILSSAFPSESASPVVTQTTTTTT 88 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~--~p~~~~~~-~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~ 88 (558)
+++|.|.+++.+|+|.|+|.+.|..|...+..+.|.+ .|.....+ +..+..| .+.+.|...+.|.|.+.|++++..
T Consensus 61 ~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~ 140 (291)
T 1qz1_A 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRD 140 (291)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSC
T ss_pred eEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEE
Confidence 4689999999999999999999998765544444444 33322222 2234444 566889998999999999999876
Q ss_pred cCCCC--ceeeccccce---------eeceeEEeeccce-e-eEEeeeceeeeCcEEEecCC--ceEeeCCCcEEEEeEe
Q psy10160 89 EATSP--HVYAALTHCV---------PWSNVCLFGARSG-Y-LKETQNGGYLVPVKVNITLE--TQVFGVGSDISIPCDV 153 (558)
Q Consensus 89 ~~~~~--~~~~g~~~~~---------~~~~~~~~~~~~~-~-~~~~~~~~~~~p~~~~~~~~--~~~v~~G~~v~L~C~~ 153 (558)
+.... +........+ .-.|.|.+.+... . ........+..+|.+...+. ...+.+|+.+.|.|.+
T Consensus 141 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~ 220 (291)
T 1qz1_A 141 VILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDA 220 (291)
T ss_dssp SSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEE
T ss_pred cccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEE
Confidence 64322 1110000011 1134455554321 1 11222334445666665443 4567899999999999
Q ss_pred eccCCCeEEEEECCEEeccCC---ceEEEccC-CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 154 DGYPIPQVFWYKDGQVIENDG---VHYRITES-NRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 154 ~g~P~p~i~W~~~g~~l~~~~---~~~~~~~~-~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
.|.|.|.+.|+++|..+.... .++....+ .+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 221 ~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 221 DGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEE
Confidence 999999999999999987653 25555443 479999999999999999999999999999999985
No 36
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.90 E-value=2.6e-22 Score=205.46 Aligned_cols=209 Identities=21% Similarity=0.288 Sum_probs=161.9
Q ss_pred ecCCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCc-----cCCCC--cccc-CceeEEeccCCCCCCcE
Q psy10160 11 LNKNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEK-----VADPN--AIDY-GTILSSAFPSESASPVV 80 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~-----~~~~~--~v~~-~~~~~~~~~~~~p~p~v 80 (558)
..+++|.|.+++.+|+|.|+|.+.|..|... ...+.|...|... ...+. .+.. ..+.+.|...+.|.|.+
T Consensus 174 ~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~ 253 (403)
T 3laf_A 174 LPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSF 253 (403)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred cCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeE
Confidence 4577999999999999999999999877643 4566666555321 11222 2333 46668899999999999
Q ss_pred EEEeCCcccCCCCceee-ccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEE
Q psy10160 81 TQTTTTTTEATSPHVYA-ALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIP 150 (558)
Q Consensus 81 ~W~~~~~~~~~~~~~~~-g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~ 150 (558)
.|++++..+........ .....+ .-.|.|.+.+..+.......+.+..||.+...+....+.+|+.+.|.
T Consensus 254 ~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~ 333 (403)
T 3laf_A 254 TWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFE 333 (403)
T ss_dssp EEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEEC
T ss_pred EEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEE
Confidence 99999877654432211 000111 12456777777777777777777788988888888889999999999
Q ss_pred eEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 151 CDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 151 C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
|.+.|.|.|.+.|+++|..+.... ++.+..+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+|
T Consensus 334 C~~~g~p~p~v~W~~~g~~~~~~~-~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 334 CAVSGKPVPTVNWMKNGDVVIPSD-YFQIVGGSNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp CEEEEESCCEEEEEETTEECCCSS-SEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred EEEeeccCCEEEEEECCEECCCCC-cEEEecCccEEEeccccccCEEEEEEEEcCCceEEEEEEEEEeCC
Confidence 999999999999999999987654 566667789999999999999999999999999999999999755
No 37
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.89 E-value=7.2e-24 Score=224.16 Aligned_cols=271 Identities=10% Similarity=-0.017 Sum_probs=162.8
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCC--CCc-cccCceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVAD--PNA-IDYGTILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~--~~~-v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
+|.|.+|+.+|+|.|+|.+.|..|.. +..+.|.+.|...... |.. ..++...+.|.+.|.|.|.++|++++.....
T Consensus 104 SL~I~~v~~~D~G~Y~C~~~n~~~~~-~~~~~v~v~~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~ 182 (527)
T 3qs9_E 104 SMVILKMTETQAGEYLLFIQSEATNY-TILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGES 182 (527)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEE-EEEEEEEEC-----CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC------
T ss_pred EEEECcCChhhCeeEEEEEEeccccE-EEEEEEEECCceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCcc
Confidence 59999999999999999999988764 3445555554332211 111 2244566899999999999999998765432
Q ss_pred CCceee--------ccccceeeceeEEeeccceeeEEe-eeceeeeCcEEEecCCceEeeCCCcEEEEeEee-ccCCCeE
Q psy10160 92 SPHVYA--------ALTHCVPWSNVCLFGARSGYLKET-QNGGYLVPVKVNITLETQVFGVGSDISIPCDVD-GYPIPQV 161 (558)
Q Consensus 92 ~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i 161 (558)
...... .......-.|.|.+.|..+..... ..+.+..+|.+ .+....+.+|+.+.|.|.+. |.|.|.|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i 260 (527)
T 3qs9_E 183 CKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGL 260 (527)
T ss_dssp -------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCE
T ss_pred ccccCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEE
Confidence 110000 000001123455566555443332 22333334433 55677889999999999996 9999999
Q ss_pred EEEECCEEeccCCceEE---------EccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCcc
Q psy10160 162 FWYKDGQVIENDGVHYR---------ITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLF 232 (558)
Q Consensus 162 ~W~~~g~~l~~~~~~~~---------~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~ 232 (558)
.|+|++..+.... .+. ....++|.|.+++.+|+|.|+|.|.|. .+..+.|.|..++ .+...+..
T Consensus 261 ~W~k~g~~l~~~~-~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p---~i~~~~~~ 333 (527)
T 3qs9_E 261 TWELENKALEEGN-YFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKG---FINATNSS 333 (527)
T ss_dssp EEECSSSCCCGGG-EEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--C---EEECCCSC
T ss_pred EEEECCEECCCCc-eeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccC---ccccccCc
Confidence 9999998775432 111 112346999999999999999999998 6677888886443 21111111
Q ss_pred ccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhhhhhhHHHhhcc
Q psy10160 233 ANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 233 ~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a~~~t~g~~~~~ 305 (558)
. .+ .+..|.... ..|.+.|.|+|.+.|++++..+..........+...+..+.....|.|...
T Consensus 334 ~--~~-----~v~~G~~v~---L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~ 396 (527)
T 3qs9_E 334 E--DY-----EIDQYEEFC---FSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFH 396 (527)
T ss_dssp C--EE-----CCCTTCCCC---EEEEEEEESCCEEEEEETTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEE
T ss_pred c--cE-----EEcCCCeEE---EEEEEEecCCCEEEEEECCEECcCCcccccCCcEEEEecCCcccCEEEEEE
Confidence 1 11 112233334 445566899999999999766543332222334455666777777777653
No 38
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.89 E-value=9.3e-22 Score=191.87 Aligned_cols=207 Identities=20% Similarity=0.290 Sum_probs=140.1
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEE--EEeCCCCccCC-CCccccC-ceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVT--LQALPSEKVAD-PNAIDYG-TILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~--V~~~p~~~~~~-~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
.+|.|.+++.+|+|.|+|.+.|..|...+..+. |...|.....+ +..+..| .+.+.|...+.|.|.+.|++++..+
T Consensus 60 ~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~ 139 (291)
T 2wim_A 60 SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEV 139 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----
T ss_pred EEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccc
Confidence 489999999999999999999998877544444 44444333222 2234444 5668899999999999999998665
Q ss_pred CC--CCceeeccccce---------eeceeEEeeccce-ee-EEeeeceeeeCcEEEecCC--ceEeeCCCcEEEEeEee
Q psy10160 90 AT--SPHVYAALTHCV---------PWSNVCLFGARSG-YL-KETQNGGYLVPVKVNITLE--TQVFGVGSDISIPCDVD 154 (558)
Q Consensus 90 ~~--~~~~~~g~~~~~---------~~~~~~~~~~~~~-~~-~~~~~~~~~~p~~~~~~~~--~~~v~~G~~v~L~C~~~ 154 (558)
.. ..+........+ .-.|.|.+.+..+ .. .......+..||.+...+. ...+.+|+.+.|.|.+.
T Consensus 140 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 219 (291)
T 2wim_A 140 TTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRAS 219 (291)
T ss_dssp CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCC
T ss_pred cccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEee
Confidence 43 111111000111 1134555554432 11 1222334445666655444 34567899999999999
Q ss_pred ccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 155 GYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 155 g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
|.|.|.+.|+++|..+..+. ++.+. .+++|.|.+++.+|+|.|+|.|.|..|....++.|.|..++
T Consensus 220 g~p~p~v~W~~~g~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 220 GSPEPAISWFRNGKLIEENE-KYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp CBSCCEEEEEETTEECCCTT-TEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC----
T ss_pred cCCCCeEEEEECCEECcCCc-cEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEEec
Confidence 99999999999999987655 44443 35689999999999999999999999999999999996554
No 39
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.89 E-value=8.6e-23 Score=209.01 Aligned_cols=277 Identities=20% Similarity=0.206 Sum_probs=172.2
Q ss_pred cCCeEEEc----CCCCCCCEEEEEEEEeCCcceEEE--EEEEEeCCCCccCC--CCccccC-ceeEEecc-CCCCCCcEE
Q psy10160 12 NKNMLTIK----RVEPERLGAYTCQAYNGLGRAVSW--TVTLQALPSEKVAD--PNAIDYG-TILSSAFP-SESASPVVT 81 (558)
Q Consensus 12 ~~~~L~I~----~v~~~D~G~Y~C~a~n~~g~~~s~--~l~V~~~p~~~~~~--~~~v~~~-~~~~~~~~-~~~p~p~v~ 81 (558)
.+++|.|. +++.+|+|.|+|.+.|..|...+. .+.|...|...... +..+.+| .+.+.|.. .+.|.|.+.
T Consensus 71 ~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~ 150 (404)
T 3p3y_A 71 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIF 150 (404)
T ss_dssp SSCCCBCCCTTTCCTTSSCEEEEEEEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEE
T ss_pred CCceEEEEeccCCCCccCCEEEEEEEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEE
Confidence 56778775 899999999999999999887544 44444444433322 2334445 55678877 788999999
Q ss_pred EEeCCcccCC-CCcee-----------------eccccceeeceeEEeecc--ceeeEEeee-ceeeeCcEEEecC---C
Q psy10160 82 QTTTTTTEAT-SPHVY-----------------AALTHCVPWSNVCLFGAR--SGYLKETQN-GGYLVPVKVNITL---E 137 (558)
Q Consensus 82 W~~~~~~~~~-~~~~~-----------------~g~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~p~~~~~~~---~ 137 (558)
|++++..... ..+.. .|.|.|.+.+........ ...+..... .....+|.+.... .
T Consensus 151 W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~ 230 (404)
T 3p3y_A 151 WMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTAS 230 (404)
T ss_dssp EECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEE
T ss_pred EeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCC
Confidence 9998744322 22221 244555444321111000 011111110 0111233333222 3
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
...+.+|+.+.|.|.+.|+|.|.+.|++++..+.....+ ....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|
T Consensus 231 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 309 (404)
T 3p3y_A 231 SQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAK-FENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRV 309 (404)
T ss_dssp EEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEE-EEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred CceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCccc-ccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEE
Confidence 456789999999999999999999999999988765533 3345679999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhh---hhhhcccccchhh
Q psy10160 218 EGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAA---DKKRRSRRSLSVV 294 (558)
Q Consensus 218 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~---~~~~~grth~q~a 294 (558)
..++ .+...+ ... .+..|. .....|.+.|.|+|.+.|++++........ .....+...+..+
T Consensus 310 ~~~p---~~~~~~---~~~------~v~~g~---~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v 374 (404)
T 3p3y_A 310 KAAP---YWLDEP---KNL------ILAPGE---DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDT 374 (404)
T ss_dssp EEEE---EEEECC---CCE------EECTTC---CEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSC
T ss_pred eCCC---eeeccC---Ccc------eeecCC---cEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeec
Confidence 7643 211111 101 122223 333556666899999999998766543321 1111233445555
Q ss_pred hhhhHHHhhc
Q psy10160 295 NKWSLRQAFT 304 (558)
Q Consensus 295 ~~~t~g~~~~ 304 (558)
.....|.|..
T Consensus 375 ~~~d~G~Y~C 384 (404)
T 3p3y_A 375 QISSRAVYQC 384 (404)
T ss_dssp CSSCCCEEEE
T ss_pred CHHHCEEEEE
Confidence 5555555443
No 40
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.89 E-value=4.1e-22 Score=196.88 Aligned_cols=205 Identities=14% Similarity=0.127 Sum_probs=140.4
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEE--EEEEEeCCCCccCC-CCccccC-ceeEEec-cCCCCCCcEEEEeCCc
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSW--TVTLQALPSEKVAD-PNAIDYG-TILSSAF-PSESASPVVTQTTTTT 87 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~--~l~V~~~p~~~~~~-~~~v~~~-~~~~~~~-~~~~p~p~v~W~~~~~ 87 (558)
+++|.|.+++.+|+|.|+|.+.+..+...+. .|.+...|...... ...+..+ ...+.|. ..+.|.|.+.|++++.
T Consensus 78 ~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~ 157 (313)
T 4fqp_A 78 NASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLG 157 (313)
T ss_dssp BCCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTC
T ss_pred ceEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCc
Confidence 4689999999999999999987644433333 44444444332222 2223333 4445555 4578999999999987
Q ss_pred ccCCCCceee---cccc---ce---------eeceeEEeeccce--eeEEeeeceeeeCcEEEec-CCceEeeCCCcEEE
Q psy10160 88 TEATSPHVYA---ALTH---CV---------PWSNVCLFGARSG--YLKETQNGGYLVPVKVNIT-LETQVFGVGSDISI 149 (558)
Q Consensus 88 ~~~~~~~~~~---g~~~---~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~-~~~~~v~~G~~v~L 149 (558)
.+........ +.+. .+ ...+.|.+.+..+ .......+.+..||.+.+. .....+.+|+.+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l 237 (313)
T 4fqp_A 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATL 237 (313)
T ss_dssp CEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEE
T ss_pred cccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEE
Confidence 6643322211 1000 01 1135677776533 2334445556677877654 44555677899999
Q ss_pred EeEeeccCCC-eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 150 PCDVDGYPIP-QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 150 ~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
.|.+.|+|.| .|.|+|+|..+.... ...+++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.|
T Consensus 238 ~C~~~g~P~p~~v~W~~~~~~l~~~~----~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 238 TCDARSNPEPTGYNWSTTMGPLPPFA----VAQGAQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp EEEEEEESCCCEEEEEETTBSCCTTE----EEETTEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred EEEecCCCCCcEEEEEECCEECCCce----EEeCCEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 9999999999 699999998886532 2346789999999999999999999999999999999997543
No 41
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.89 E-value=2.4e-22 Score=224.93 Aligned_cols=274 Identities=19% Similarity=0.273 Sum_probs=186.9
Q ss_pred CceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCC-Ccccc-CceeEEeccCCCCCCcEEEE
Q psy10160 7 ENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADP-NAIDY-GTILSSAFPSESASPVVTQT 83 (558)
Q Consensus 7 ~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~-~~v~~-~~~~~~~~~~~~p~p~v~W~ 83 (558)
.++...+++|.|.+++.+|+|.|+|.+.|..|... ...+.|..++.....++ ..+.. ..+.+.|...+.|.|.+.|+
T Consensus 299 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~ 378 (816)
T 3dmk_A 299 DRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWM 378 (816)
T ss_dssp SSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEE
T ss_pred CceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEE
Confidence 45556778999999999999999999999988763 45566654443333222 22444 46678999999999999999
Q ss_pred eCCcccCCCCce---------eeccccceeeceeEEeeccceeeEEeeecee---eeCcEEEecCCceEeeCCCcEEEEe
Q psy10160 84 TTTTTEATSPHV---------YAALTHCVPWSNVCLFGARSGYLKETQNGGY---LVPVKVNITLETQVFGVGSDISIPC 151 (558)
Q Consensus 84 ~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~v~~G~~v~L~C 151 (558)
+++..+..+... ..|.|.|. +.+..+.........+ ..||.+...+....+.+|+.+.|.|
T Consensus 379 k~g~~~~~~~~~L~i~~v~~~d~G~Y~C~-------a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C 451 (816)
T 3dmk_A 379 KDGKAIGHSESVLRIESVKKEDKGMYQCF-------VRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKC 451 (816)
T ss_dssp ETTEECSCCSSEEEESSCCGGGCEEEEEE-------EECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEE
T ss_pred ECCEECCCCCCEEEEcCCCHHHCEEEEEE-------EECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEE
Confidence 998877654332 24555554 4444443333333222 3577777778888899999999999
Q ss_pred EeeccCCCeEEEEECCEEeccCCceEEE----ccCC----eEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCC
Q psy10160 152 DVDGYPIPQVFWYKDGQVIENDGVHYRI----TESN----RLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIH 223 (558)
Q Consensus 152 ~~~g~P~p~i~W~~~g~~l~~~~~~~~~----~~~~----sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 223 (558)
.+.|+|.|.+.|+++|..+.... ++.. ..++ +|.|.+++.+|+|.|+|.|.|..|....++.|.|..++
T Consensus 452 ~~~g~p~p~v~W~~~g~~l~~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p-- 528 (816)
T 3dmk_A 452 VAGGNPTPEISWELDGKKIANND-RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLP-- 528 (816)
T ss_dssp EEECSSCCEEEEEETTEECCSCT-TEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSC--
T ss_pred EEecCCCCEEEEEECCEECCCCC-CcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCC--
Confidence 99999999999999999987654 3332 2222 59999999999999999999999999999999997543
Q ss_pred CCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-hhhhhcccccchhhh-hhhHHH
Q psy10160 224 PSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-ADKKRRSRRSLSVVN-KWSLRQ 301 (558)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~~~~~~grth~q~a~-~~t~g~ 301 (558)
.+... .. ..+. . +......|.+.+.|.+.+.|++++....... ......|...+..+. ....|.
T Consensus 529 -~~~~~---~~-~~v~------~---G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~ 594 (816)
T 3dmk_A 529 -YIRQM---EK-KAIV------A---GETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQAT 594 (816)
T ss_dssp -EECCC---CC-EEEE------T---TCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEE
T ss_pred -eeEcc---CC-eEEe------c---CCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEE
Confidence 21111 11 1121 2 3334466777789999999999876543322 222223444444443 344554
Q ss_pred hhc
Q psy10160 302 AFT 304 (558)
Q Consensus 302 ~~~ 304 (558)
|..
T Consensus 595 Y~C 597 (816)
T 3dmk_A 595 YTC 597 (816)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 42
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.89 E-value=5.6e-22 Score=210.53 Aligned_cols=275 Identities=13% Similarity=0.077 Sum_probs=179.5
Q ss_pred eEecCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCC-CccccC-ceeEEeccCCCCCCcEEEEe-C
Q psy10160 9 YELNKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADP-NAIDYG-TILSSAFPSESASPVVTQTT-T 85 (558)
Q Consensus 9 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~-~~v~~~-~~~~~~~~~~~p~p~v~W~~-~ 85 (558)
....+++|.|.+++.+|+|.|+|.+.| |...+..|.|..+|.....++ ..+..| .+.+.|...+.|.|.+.|++ +
T Consensus 75 ~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~~~~~~l~V~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~ 152 (524)
T 2ec8_A 75 NENKQNEWITEKAEATNTGKYTCTNKH--GLSNSIYVFVRDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQ 152 (524)
T ss_dssp EEECSSEEEESSCCSTTCEEEEEEETT--SCEEEEEEECCCSSCSBCCCCCCCEETTSCEEECCCBSCCCCSCEEEECSS
T ss_pred ccCccceEEEcccchhhCEEEEEeecC--CcceEEEEEECCCCcccccccceEEEcCCeEEEECcCCCCccceEEEEccC
Confidence 345678999999999999999999999 654466666655554442222 234444 66688888887779999988 6
Q ss_pred CcccCCCCcee----------------ec-cccceeeceeEEeeccceeeEE-eeecee----eeCcEEEecCCceEeeC
Q psy10160 86 TTTEATSPHVY----------------AA-LTHCVPWSNVCLFGARSGYLKE-TQNGGY----LVPVKVNITLETQVFGV 143 (558)
Q Consensus 86 ~~~~~~~~~~~----------------~g-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~p~~~~~~~~~~~v~~ 143 (558)
+..+..+.+.. .| .|.|.+.+. .+.... ...+.+ ..||.+...+....+.+
T Consensus 153 g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~-------~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~ 225 (524)
T 2ec8_A 153 GKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQE-------GKSVLSEKFILKVRPAFKAVPVVSVSKASYLLRE 225 (524)
T ss_dssp SCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC-----------CCCCCCEECCEECCCCSCCEEECSCSEEEEET
T ss_pred CcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEEC-------CceEEEEEEEEEEEeCCCCCCcEEecCCcceEEc
Confidence 66554433321 34 555554433 221111 122222 36788888888888999
Q ss_pred CCcEEEEeEeeccCCCe-EEEEECCEEe--ccCCceEEE------ccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 144 GSDISIPCDVDGYPIPQ-VFWYKDGQVI--ENDGVHYRI------TESNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 144 G~~v~L~C~~~g~P~p~-i~W~~~g~~l--~~~~~~~~~------~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
|+.+.|.|.+.|.|.|. +.|++++..+ .... +... ..+++|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 226 G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 304 (524)
T 2ec8_A 226 GEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKY-NSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTT 304 (524)
T ss_dssp TSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEE-EEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEE
T ss_pred CCcEEEEEEEecCCCcEEEEEEeCCCCCcccccc-ccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEE
Confidence 99999999999999997 9999999873 2211 2222 23458999999999999999999999999999999
Q ss_pred EEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCc-ccccchhhhhhhhhhhhh---------
Q psy10160 215 IRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSY-GPHIKRAVEAEAAAADKK--------- 284 (558)
Q Consensus 215 l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~-~~w~~~~l~~~~~~~~~~--------- 284 (558)
|.|..++ .+...+..... ..+..|.... ..|.+.|.|+|. +.|++++...........
T Consensus 305 l~V~~~p---~~~~~~~~~~~------~~v~~G~~v~---l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~ 372 (524)
T 2ec8_A 305 LEVVDKG---FINIFPMINTT------VFVNDGENVD---LIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIR 372 (524)
T ss_dssp EEEESSC---EEEEEESSCSE------EEECTTCCEE---EEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCE
T ss_pred EEEeccC---ceEeecCCCce------EEEcCCCcEE---EEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCce
Confidence 9997543 22211111011 1123333344 455566899999 999999766543321111
Q ss_pred hcccccchhhhhhhHHHhhcc
Q psy10160 285 RRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 285 ~~grth~q~a~~~t~g~~~~~ 305 (558)
..+..++..+.....|.|...
T Consensus 373 ~~~~L~i~~v~~~d~G~Y~C~ 393 (524)
T 2ec8_A 373 YVSELHLTRLKGTEGGTYTFL 393 (524)
T ss_dssp EEEEEEECSCCGGGCEEEEEE
T ss_pred eEEEEEEeecCcccCeEEEEE
Confidence 123456666667777766553
No 43
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.89 E-value=2e-21 Score=198.75 Aligned_cols=212 Identities=13% Similarity=0.193 Sum_probs=157.0
Q ss_pred ceEe-cCCeEEEcCCCCCC-CEEEEEEEEeCCcceE----EEEEEEEeCCCCc------cCCC-----Ccccc-CceeEE
Q psy10160 8 NYEL-NKNMLTIKRVEPER-LGAYTCQAYNGLGRAV----SWTVTLQALPSEK------VADP-----NAIDY-GTILSS 69 (558)
Q Consensus 8 r~~~-~~~~L~I~~v~~~D-~G~Y~C~a~n~~g~~~----s~~l~V~~~p~~~------~~~~-----~~v~~-~~~~~~ 69 (558)
++.. .+++|.|.+++.+| +|.|+|.+.|..|... ...+.|...+... ..++ ..+.. ..+.+.
T Consensus 164 ~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~ 243 (404)
T 3p3y_A 164 RVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 243 (404)
T ss_dssp SEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEE
T ss_pred cEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEE
Confidence 4443 57899999999999 5999999999887643 2344444322111 1111 11333 456689
Q ss_pred eccCCCCCCcEEEEeCCcccCCCCceeeccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCCceE
Q psy10160 70 AFPSESASPVVTQTTTTTTEATSPHVYAALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQV 140 (558)
Q Consensus 70 ~~~~~~p~p~v~W~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 140 (558)
|...+.|.|.+.|++++..+.............+ .-.|.|.+.+..+.......+.+..+|.+...+....
T Consensus 244 C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 323 (404)
T 3p3y_A 244 CIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLI 323 (404)
T ss_dssp CCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEE
T ss_pred EEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcce
Confidence 9999999999999999988765543322111112 2245677777777666666677778888888888899
Q ss_pred eeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 141 FGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
+.+|+.+.|.|.+.|+|.|.+.|+++|..+..... ......+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 324 v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 324 LAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp ECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred eecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999999999876431 11223456899999999999999999999999999999999853
No 44
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.88 E-value=6.4e-22 Score=193.14 Aligned_cols=205 Identities=16% Similarity=0.191 Sum_probs=141.0
Q ss_pred ecCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCC-ccccC-ceeEEeccCCCCC-CcEEEE-eCC
Q psy10160 11 LNKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPN-AIDYG-TILSSAFPSESAS-PVVTQT-TTT 86 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~-~v~~~-~~~~~~~~~~~p~-p~v~W~-~~~ 86 (558)
..+++|.|.+++.+|+|.|+|.+.| |...++.|.|..+|......+. .+..| .+.+.|...+ |. |.+.|+ +++
T Consensus 54 ~~~~~L~i~~~~~~d~G~Y~C~~~n--g~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g 130 (290)
T 2o26_X 54 NKKNEWIQEKAEATRTGTYTCSNSN--GLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDG 130 (290)
T ss_dssp ECSSEEEETTCCGGGCEEEEEEESS--SCEEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTS
T ss_pred CCCceEEEeccCHHhCeEEEEEeeC--CccEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCC
Confidence 3458999999999999999999999 6556778888876665533322 23444 5667888774 77 999995 566
Q ss_pred cccCCCCcee----------------ec-cccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEE
Q psy10160 87 TTEATSPHVY----------------AA-LTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISI 149 (558)
Q Consensus 87 ~~~~~~~~~~----------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L 149 (558)
..+....+.. .| .|.|.+.+......... ...........+|.+...+....+.+|+.+.|
T Consensus 131 ~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~--~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l 208 (290)
T 2o26_X 131 KSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDK--FTLKVREAIKAIPVVSVPETSHLLKKGDTFTV 208 (290)
T ss_dssp CCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCC--EEEEEECCCCSCCEEECSCSBCCCCTTCCEEE
T ss_pred cCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEE--EEEEEEeCCCCCCccccCCCcceEecCCcEEE
Confidence 6655433321 34 45544443321111111 11111111236788888877788999999999
Q ss_pred EeEeeccCCCe-EEEEECCEEe----ccCC-ceE----EEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 150 PCDVDGYPIPQ-VFWYKDGQVI----ENDG-VHY----RITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 150 ~C~~~g~P~p~-i~W~~~g~~l----~~~~-~~~----~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
.|.+.|.|.|. +.|++++..+ .... ..+ .....++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 209 ~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 209 VCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp EEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred EEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 99999999997 9999998763 2211 111 122345899999999999999999999999999999998865
Q ss_pred c
Q psy10160 220 I 220 (558)
Q Consensus 220 ~ 220 (558)
+
T Consensus 289 ~ 289 (290)
T 2o26_X 289 K 289 (290)
T ss_dssp -
T ss_pred C
Confidence 4
No 45
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.88 E-value=3.2e-22 Score=212.35 Aligned_cols=248 Identities=13% Similarity=0.125 Sum_probs=168.7
Q ss_pred ceEe-cCCeEEEcCCCCCCCE-EEEEEEEeCCcceE--EEEEEEEe---CCCCccCCCCc--ccc-CceeEEeccCCCCC
Q psy10160 8 NYEL-NKNMLTIKRVEPERLG-AYTCQAYNGLGRAV--SWTVTLQA---LPSEKVADPNA--IDY-GTILSSAFPSESAS 77 (558)
Q Consensus 8 r~~~-~~~~L~I~~v~~~D~G-~Y~C~a~n~~g~~~--s~~l~V~~---~p~~~~~~~~~--v~~-~~~~~~~~~~~~p~ 77 (558)
++.. .++.|.|.+++.+|+| .|+|.+.|..|... .+.|.|.. .++.....+.. +.. ..+.+.|...+.|.
T Consensus 161 ~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~ 240 (524)
T 2ec8_A 161 RFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSS 240 (524)
T ss_dssp EEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESST
T ss_pred ceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCC
Confidence 4443 5779999999999999 99999999876653 45566652 22322233322 334 46668999989998
Q ss_pred Cc-EEEEeCCccc--CCCCcee------eccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCC--
Q psy10160 78 PV-VTQTTTTTTE--ATSPHVY------AALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLE-- 137 (558)
Q Consensus 78 p~-v~W~~~~~~~--~~~~~~~------~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-- 137 (558)
|. +.|++++..+ ....... ......+ .-.|.|.+.+..+.......+.+..+|.+...+.
T Consensus 241 p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 320 (524)
T 2ec8_A 241 SVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMIN 320 (524)
T ss_dssp TCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSC
T ss_pred cEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCC
Confidence 88 9999998773 2111100 0000111 1245677777776666666666777777766543
Q ss_pred -ceEeeCCCcEEEEeEeeccCCCe-EEEEECCEEeccCCceEEEccC-------CeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 138 -TQVFGVGSDISIPCDVDGYPIPQ-VFWYKDGQVIENDGVHYRITES-------NRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 138 -~~~v~~G~~v~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~-------~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
...+.+|+.+.|.|.+.|+|.|. +.|+|+|..+.....++....+ ++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 321 ~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 400 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVN 400 (524)
T ss_dssp SEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred ceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCce
Confidence 67789999999999999999999 9999999988765434443332 37999999999999999999999999
Q ss_pred eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 209 DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 209 ~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
.+.++.|.|..+| .+...+. ... + ...|.+.|.|+|.+.|++++...
T Consensus 401 ~~~~~~l~V~~~P---~i~~~~~------------~~~---g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 401 AAIAFNVYVNTKP---EILTYDR------------LVN---G---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp EEEEEEEEECEEE---EEEEEEC------------CSS---S---CEEEEEEEESCCEEECCCC----
T ss_pred EEEEEEEEEecCC---eEeeccc------------CcC---c---EEEEEEEeecCCEEEEEECCCcc
Confidence 9999999996543 2111110 111 2 35566669999999999996544
No 46
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.88 E-value=8e-22 Score=194.80 Aligned_cols=213 Identities=14% Similarity=0.131 Sum_probs=144.8
Q ss_pred CCceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCC-----Ccccc-CceeEEecc------
Q psy10160 6 SENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADP-----NAIDY-GTILSSAFP------ 72 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~-----~~v~~-~~~~~~~~~------ 72 (558)
..|+...+++|.|.+++.+|+|.|+|.+.|..|... +..+.+...++.....+ ..+.. ..+.+.|..
T Consensus 54 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~ 133 (315)
T 1itb_B 54 ASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN 133 (315)
T ss_dssp TSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCT
T ss_pred CCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEeccccccc
Confidence 456777788999999999999999999999887653 34444433333322222 22333 466688877
Q ss_pred CCCCCCcEEEEeCCcccCCCCceeecccccee---------eceeEEee-ccceeeE---Eeeecee-----eeCcEEEe
Q psy10160 73 SESASPVVTQTTTTTTEATSPHVYAALTHCVP---------WSNVCLFG-ARSGYLK---ETQNGGY-----LVPVKVNI 134 (558)
Q Consensus 73 ~~~p~p~v~W~~~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~-~~~~~~~---~~~~~~~-----~~p~~~~~ 134 (558)
.+.|.|.+.|++++..+.............+. -.|.|.+. +..+... ......+ ..+|.+..
T Consensus 134 ~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~ 213 (315)
T 1itb_B 134 ENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS 213 (315)
T ss_dssp TTTCCCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS
T ss_pred CCCCCCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec
Confidence 78899999999999877543322111111111 12344444 3322221 1111111 25666665
Q ss_pred cCCc-eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-----eEEEcc---------CCeEEEccCCCCC-CeEE
Q psy10160 135 TLET-QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-----HYRITE---------SNRLHINQANATD-SGEY 198 (558)
Q Consensus 135 ~~~~-~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-----~~~~~~---------~~sL~I~~v~~~D-~G~Y 198 (558)
.+.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..... ++.+.. .++|.|.+++.+| +|.|
T Consensus 214 ~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y 293 (315)
T 1itb_B 214 PANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPF 293 (315)
T ss_dssp CCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCE
T ss_pred CCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCce
Confidence 5554 4688999999999999999999999999999876541 222211 2379999999999 9999
Q ss_pred EEEEEeCCceeeEEEEEEEe
Q psy10160 199 RCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~~l~V~ 218 (558)
+|.|.|..|....++.|.|.
T Consensus 294 ~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 294 TCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEEEECTTCCEEEEEEEECC
T ss_pred EEEEecCCCceeEEEEEEec
Confidence 99999999999999999884
No 47
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.88 E-value=2.8e-21 Score=210.42 Aligned_cols=267 Identities=13% Similarity=0.164 Sum_probs=176.5
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCC--ccccC-ceeEEeccCCCCCCcEEEEeCC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPN--AIDYG-TILSSAFPSESASPVVTQTTTT 86 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~--~v~~~-~~~~~~~~~~~p~p~v~W~~~~ 86 (558)
.+++|.|.+++.+|+|.|+|.|.|..|... ...+.|...|......+. .+..| .+.+.|...+.|.|.+.|++++
T Consensus 340 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g 419 (642)
T 1e07_A 340 DNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDG 419 (642)
T ss_pred CCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECC
Confidence 467999999999999999999999988754 456666666654333332 23444 5668999999999999999999
Q ss_pred cccCCCCce--------eeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCC
Q psy10160 87 TTEATSPHV--------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPI 158 (558)
Q Consensus 87 ~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~ 158 (558)
..+...... ..|.|.|.+.+....... ...+...... ...+|.+.. .....+.+|+.+.|.|.+.+ |.
T Consensus 420 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-s~~~~v~v~~-~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~ 495 (642)
T 1e07_A 420 NIQQHTQELFISNITEKNSGLYTCQANNSASGHSR-TTVKTITVSA-ELPKPSISS-NNSKPVEDKDAVAFTCEPEA-QN 495 (642)
T ss_pred EEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcc-cceEEEEEec-cCCCceEec-CCceeecCCCeEEEEEECCC-CC
Confidence 777554432 245666555544321111 0111111110 012344433 44566789999999999995 88
Q ss_pred CeEEEEECCEEeccCCceEEEcc-CCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEEeccCCCCCCCCCCccccce
Q psy10160 159 PQVFWYKDGQVIENDGVHYRITE-SNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRVEGIFIHPSCRDLPLFANCK 236 (558)
Q Consensus 159 p~i~W~~~g~~l~~~~~~~~~~~-~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~ 236 (558)
|.+.|+|+|..+..+. ++.+.. +++|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..++..+... + .+ .
T Consensus 496 ~~i~W~~~g~~l~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~--~--~~-~ 569 (642)
T 1e07_A 496 TTYLWWVNGQSLPVSP-RLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIIS--P--PD-S 569 (642)
T ss_pred cEEEEEECCEeCCCCC-cEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceec--C--Cc-e
Confidence 9999999999987654 555543 56899999999999999999999999864 46888887543222111 1 11 1
Q ss_pred eEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhhhhhhHHHhhc
Q psy10160 237 LIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 237 ~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
. +.. +......|.+.|.|+|.+.|++++..+.. .+...+..+.+...|.|..
T Consensus 570 ~------v~~---g~~~~l~C~~~g~p~p~v~W~~~g~~i~~-------~~~L~i~~~~~~d~G~Y~C 621 (642)
T 1e07_A 570 S------YLS---GANLNLSCHSASNPSPQYSWRINGIPQQH-------TQVLFIAKITPNNNGTYAC 621 (642)
T ss_pred e------EEc---CCcEEEEEEeccCCCCeEEEEECCEECcc-------CceEEECcccccCCeEEEE
Confidence 1 122 33444566677999999999998754321 1234444555555665554
No 48
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.88 E-value=3.4e-21 Score=189.34 Aligned_cols=204 Identities=19% Similarity=0.257 Sum_probs=137.7
Q ss_pred CeEEEcCCCC-CCCEEEEEEEEeCCcceE-EEEEEEEeCCC------CccCCCC--ccccC-ceeEEeccCCCCCCcEEE
Q psy10160 14 NMLTIKRVEP-ERLGAYTCQAYNGLGRAV-SWTVTLQALPS------EKVADPN--AIDYG-TILSSAFPSESASPVVTQ 82 (558)
Q Consensus 14 ~~L~I~~v~~-~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~------~~~~~~~--~v~~~-~~~~~~~~~~~p~p~v~W 82 (558)
.+|.|.+++. +|+|.|+|.+.|..|... +..|.|...+. .....+. .+..| .+.+.|...+.|.|.+.|
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W 142 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITW 142 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEE
T ss_pred eEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEE
Confidence 5799999998 999999999999988753 66777765421 1122222 23444 667889999999999999
Q ss_pred EeCCcccCCCC---ceeeccccce---------eeceeEEeeccceeeEEe-eecee---eeCcEEEecCCceEeeCCCc
Q psy10160 83 TTTTTTEATSP---HVYAALTHCV---------PWSNVCLFGARSGYLKET-QNGGY---LVPVKVNITLETQVFGVGSD 146 (558)
Q Consensus 83 ~~~~~~~~~~~---~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~-~~~~~---~~p~~~~~~~~~~~v~~G~~ 146 (558)
++++..+.... +........+ .-.|.|.+.+..+..... ....+ ..+|.+...+....+.+|+.
T Consensus 143 ~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~ 222 (304)
T 2yd9_A 143 FKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGN 222 (304)
T ss_dssp EETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCC
T ss_pred EECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCe
Confidence 99986654331 1110001111 113455555554433211 11122 25777777777788899999
Q ss_pred EEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 147 ISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 147 v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
+.|.|.+.|.|.|.+.|++++..+.... ++. .....|.|.++ +|+|.|+|.|.|..|.....+.|.|.+++
T Consensus 223 v~l~C~~~g~p~p~v~W~~~~~~l~~~~-~~~-~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 293 (304)
T 2yd9_A 223 VNITCVAVGSPMPYVKWMQGAEDLTPED-DMP-VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKSLP 293 (304)
T ss_dssp EEEEEEEEEESCCEEEEEETTEECSCSS-SCC-BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC-----
T ss_pred EEEEEEEeeeCCCEEEEEECCEECCCcc-ccc-CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEecCc
Confidence 9999999999999999999999987643 211 11224666655 69999999999999999999999997554
No 49
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.88 E-value=5.8e-22 Score=209.57 Aligned_cols=228 Identities=14% Similarity=0.052 Sum_probs=149.5
Q ss_pred cCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCC-CccccC-ceeEEeccC-CCCCCcEEEEeCCcccCCCCce
Q psy10160 19 KRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADP-NAIDYG-TILSSAFPS-ESASPVVTQTTTTTTEATSPHV 95 (558)
Q Consensus 19 ~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~-~~v~~~-~~~~~~~~~-~~p~p~v~W~~~~~~~~~~~~~ 95 (558)
..++.+|+|.|+|.|.|..|...+..+.|.+.......++ ..+..| .+.+.|.+. +.|.|.++|++++..+......
T Consensus 196 ~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~ 275 (527)
T 3qs9_E 196 KVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYF 275 (527)
T ss_dssp SEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCCSCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEE
T ss_pred eeccccCCEEEEEEEEeCCCcccceEEEEEEeccCccCCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCcee
Confidence 3456899999999999999987653344444322222222 224444 566888886 8999999999998776543211
Q ss_pred ee---------ccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecC--CceEeeCCCcEEEEeEeec
Q psy10160 96 YA---------ALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITL--ETQVFGVGSDISIPCDVDG 155 (558)
Q Consensus 96 ~~---------g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~v~~G~~v~L~C~~~g 155 (558)
.. .....+ .-.|.|.+.|. ......+.+..+|.+...+ ....+.+|+.+.|.|.+.|
T Consensus 276 ~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g 352 (527)
T 3qs9_E 276 EMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKA 352 (527)
T ss_dssp EEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEE
T ss_pred eeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEe
Confidence 00 000001 11345555554 2233334444566555443 3456788999999999999
Q ss_pred cCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccc
Q psy10160 156 YPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANC 235 (558)
Q Consensus 156 ~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~ 235 (558)
+|.|.+.|+|+|..+..... + ...+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..+ |.+...+
T Consensus 353 ~P~p~i~W~k~g~~l~~~~~-~-~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~---P~i~~~~----- 422 (527)
T 3qs9_E 353 YPQIRCTWTFSRKSFPCEQK-G-LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK---PQVLAEA----- 422 (527)
T ss_dssp ESCCEEEEEETTEEEECBCC-B-CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CC---CEEEECC-----
T ss_pred cCCCEEEEEECCEECcCCcc-c-ccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecC---CeEEEeC-----
Confidence 99999999999999876442 2 235568999999999999999999999999999999999643 3322111
Q ss_pred eeEEeceeeecccceeEEEEeccCCCCCCCcccccchhh
Q psy10160 236 KLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV 274 (558)
Q Consensus 236 ~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l 274 (558)
..++ ..|.+.|.|+|.+.|+++..
T Consensus 423 ------------~~~~---l~C~a~g~P~p~i~W~~~~~ 446 (527)
T 3qs9_E 423 ------------SASQ---ASCFSDGYPLPSWTWKKCSD 446 (527)
T ss_dssp ------------CCE------EEEECSSCCEEEEECCC-
T ss_pred ------------CCCE---EEEEEEEEcCCeEEEEECCC
Confidence 0122 36667799999999998743
No 50
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.87 E-value=1.7e-21 Score=196.77 Aligned_cols=241 Identities=12% Similarity=0.040 Sum_probs=163.4
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccC-ceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYG-TILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
+.+|.|.+++.+|+|.|+|.+.|..+ +..+.|...+ ..+...+.+| .+.+.|...+.|.|.+.|++++.....
T Consensus 66 ~~~L~I~~v~~~D~G~Y~C~~~n~~~---~~~l~V~~~~---~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 139 (363)
T 1wio_A 66 NFPLIIKNLKIEDSDTYICEVEDQKE---EVQLLVFGLT---ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ 139 (363)
T ss_dssp CCCEEECSCCGGGCEEEEEEETTEEE---EEEEEEEEEE---ESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE
T ss_pred eEEEEECCCCHHHCEEEEEEEEECCC---cEEEEEEeCC---CCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc
Confidence 56899999999999999999998643 4445554321 2222344444 667899988899999999998755422
Q ss_pred CC---------ceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeec-----cC
Q psy10160 92 SP---------HVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDG-----YP 157 (558)
Q Consensus 92 ~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g-----~P 157 (558)
.. ....|.|.|.+. +............+..+|.. +....+.+|+.+.|.|.+.| +|
T Consensus 140 ~~~~L~i~~v~~~d~G~Y~C~a~-------~~~~~~~~~~~l~v~~~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P 209 (363)
T 1wio_A 140 GGKTLSVSQLELQDSGTWTCTVL-------QNQKKVEFKIDIVVLAFQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTG 209 (363)
T ss_dssp ESSEEEECSBCGGGCEECEEEEE-------ETTEEEEECCEECEECCSCS---EEEEEEETBCCEEEECCCCCCCCSSCE
T ss_pred cceEEEEeeCChhcCCEEEEEEe-------cCCCeEEEEEEEEEecCCCC---CCceEEecCCEEEEEEEEecccccCCC
Confidence 11 122556666554 33333333333333333321 24556789999999998888 88
Q ss_pred CCeEEEEECCEEeccC-------CceEEEc-----------c--CCeEEEccCCCCCCeEEEEEEEeC--CceeeEEEEE
Q psy10160 158 IPQVFWYKDGQVIEND-------GVHYRIT-----------E--SNRLHINQANATDSGEYRCVASNS--YTSDENAVTI 215 (558)
Q Consensus 158 ~p~i~W~~~g~~l~~~-------~~~~~~~-----------~--~~sL~I~~v~~~D~G~Y~C~a~N~--~G~~~~~~~l 215 (558)
.|.+.|+++|..+... +.++.+. . ..+|.|.+++.+|+|.|+|.|.|. .|.....+.|
T Consensus 210 ~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l 289 (363)
T 1wio_A 210 SGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNL 289 (363)
T ss_dssp EEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEE
T ss_pred ceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeE
Confidence 9999999999887652 3355442 2 348999999999999999999999 9998999999
Q ss_pred EEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCc--ccccchhhhhhhhhhhhhhcccccchh
Q psy10160 216 RVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSY--GPHIKRAVEAEAAAADKKRRSRRSLSV 293 (558)
Q Consensus 216 ~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~--~~w~~~~l~~~~~~~~~~~~grth~q~ 293 (558)
.|.... |.... ..|.+.|.|+|. +.|++++..... .++..+..
T Consensus 290 ~V~~v~-------------------------g~~~~---l~C~~~g~p~p~~~i~W~~~~~~~~~-------~~~l~i~~ 334 (363)
T 1wio_A 290 VVMRAT-------------------------QLQKN---LTCEVWGPTSPKLMLSLKLENKEAKV-------SKREKAVW 334 (363)
T ss_dssp EEEEEC-------------------------CCSSS---EEEEEESSCCTTCCEEEECSSSSCSE-------EESSSEEE
T ss_pred EEEEec-------------------------CCCee---EEEEEccccCCCccEEEEeCCCceee-------eeeeeeee
Confidence 986211 12233 445556889998 999999754432 23344555
Q ss_pred hhhhhHHHhhc
Q psy10160 294 VNKWSLRQAFT 304 (558)
Q Consensus 294 a~~~t~g~~~~ 304 (558)
+.+...|.|..
T Consensus 335 v~~~d~G~Y~C 345 (363)
T 1wio_A 335 VLNPEAGMWQC 345 (363)
T ss_dssp ESSCCSEEEEE
T ss_pred eccccceeEEE
Confidence 66666665554
No 51
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=4.2e-21 Score=187.13 Aligned_cols=203 Identities=17% Similarity=0.168 Sum_probs=133.4
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeC-CCC-ccCCC-----CccccC-ceeEEeccCCCCCCcEEEE
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQAL-PSE-KVADP-----NAIDYG-TILSSAFPSESASPVVTQT 83 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~-p~~-~~~~~-----~~v~~~-~~~~~~~~~~~p~p~v~W~ 83 (558)
++|.|.+++.+|+|.|+|.|.|..|... +..+.|.+. |.. ..... ..+.+| .+.+.|.+. .|.|.++|+
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~ 129 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLH 129 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEE
Confidence 5899999999999999999999887632 345555554 222 22111 124444 556788777 788999999
Q ss_pred eCCcccCCCCc----------eeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEe
Q psy10160 84 TTTTTEATSPH----------VYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDV 153 (558)
Q Consensus 84 ~~~~~~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~ 153 (558)
+.+........ ...|.|.|.+.+...........+.... ..+|.+...+....+.+|+.+.|.|.+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~----~~~p~i~~~~~~~~v~~G~~v~L~C~~ 205 (289)
T 3mjg_X 130 EKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQ----VSSINVSVNAVQTVVRQGENITLMCIV 205 (289)
T ss_dssp ESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECC----CCCCCCEEEESCSEEETTSCEEEEEEE
T ss_pred eCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecC----CCCCCcEEeCCcceeEcCCCEEEEEEE
Confidence 97633322211 1246666665543322222211111111 146666676667788999999999999
Q ss_pred eccCCCeEEEEECCEEeccCCc-eEEEc------cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 154 DGYPIPQVFWYKDGQVIENDGV-HYRIT------ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 154 ~g~P~p~i~W~~~g~~l~~~~~-~~~~~------~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
.|+|.|.+.|++++........ ..... ..++|.|.+++.+|+|.|+|.|.|..|....++.|+|.+.+
T Consensus 206 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~ 280 (289)
T 3mjg_X 206 IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVVE 280 (289)
T ss_dssp ESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEEC
T ss_pred CCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEEe
Confidence 9999999999987754332111 11111 22589999999999999999999999999999999997655
No 52
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.87 E-value=7.4e-22 Score=195.01 Aligned_cols=206 Identities=17% Similarity=0.172 Sum_probs=140.7
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEe--CCCCccCC-CCcccc-CceeEEeccCC----------CCC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQA--LPSEKVAD-PNAIDY-GTILSSAFPSE----------SAS 77 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~--~p~~~~~~-~~~v~~-~~~~~~~~~~~----------~p~ 77 (558)
.+.+|.|.+++.+|+|.|+|.+.|..|... ..+.|.+ .|...... ...+.. ....+.|...+ .|.
T Consensus 59 ~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~ 137 (317)
T 2y25_A 59 GICTLLITEFSKKDAGIYEVILKDDRGKDK-SRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVED 137 (317)
T ss_dssp CCEEEEETTCCSTTCSCEEEEEESSSCEEE-EEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSS
T ss_pred CeEEEEEccCCcccCeEEEEEEECCCCcEE-EEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCC
Confidence 345999999999999999999999888653 2333322 22111000 111122 23334554444 689
Q ss_pred CcEEEEeCCcccCCCCceeeccccc---e---------eeceeEEeeccceeeEEeeeceee------------------
Q psy10160 78 PVVTQTTTTTTEATSPHVYAALTHC---V---------PWSNVCLFGARSGYLKETQNGGYL------------------ 127 (558)
Q Consensus 78 p~v~W~~~~~~~~~~~~~~~g~~~~---~---------~~~~~~~~~~~~~~~~~~~~~~~~------------------ 127 (558)
|.+.|++++..+..+.+........ + .-.|.|.+.+..+.........+.
T Consensus 138 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~ 217 (317)
T 2y25_A 138 LKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 217 (317)
T ss_dssp CEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccC
Confidence 9999999998887655443211111 1 124566666665544433322211
Q ss_pred --eCcEE-EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC-C---eEEEccCCCCCCeEEEE
Q psy10160 128 --VPVKV-NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES-N---RLHINQANATDSGEYRC 200 (558)
Q Consensus 128 --~p~~~-~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~---sL~I~~v~~~D~G~Y~C 200 (558)
.+|.+ ...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+..+. ++.+... + +|.|.+++.+|+|.|+|
T Consensus 218 ~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~-~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 296 (317)
T 2y25_A 218 EKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDD-HCNLKFEAGRTAYFTINGVSTADSGKYGL 296 (317)
T ss_dssp TTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCS-SEEECCBTTTEEEEEEBSCCSTTCEEEEE
T ss_pred cCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCC-cEEEEEcCCCEEEEEECCCCHHHCEEEEE
Confidence 12333 334556788999999999999999999999999999987654 5555443 4 89999999999999999
Q ss_pred EEEeCCceeeEEEEEEEec
Q psy10160 201 VASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 201 ~a~N~~G~~~~~~~l~V~~ 219 (558)
.|.|..|..+..+.|.|..
T Consensus 297 ~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 297 VVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCeEEEEEEEEEEc
Confidence 9999999999999999964
No 53
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.87 E-value=3.1e-21 Score=196.79 Aligned_cols=277 Identities=14% Similarity=0.109 Sum_probs=167.3
Q ss_pred ecCCeEEEcCCCCCCCEEEEEEEEeCCcceEE--EEEEEEeCCCCccC-CCCccccC-ceeEEecc-CCCCCCcEEEEeC
Q psy10160 11 LNKNMLTIKRVEPERLGAYTCQAYNGLGRAVS--WTVTLQALPSEKVA-DPNAIDYG-TILSSAFP-SESASPVVTQTTT 85 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s--~~l~V~~~p~~~~~-~~~~v~~~-~~~~~~~~-~~~p~p~v~W~~~ 85 (558)
..+++|.|.+++.+|+|.|+|.+.|..|...+ ..+.|.+.+.+... ....+..| .+.+.|.. .+.|.|.+.|+++
T Consensus 59 ~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~~~~p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~ 138 (395)
T 1bih_A 59 KDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKR 138 (395)
T ss_dssp TTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEEEECCCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEE
T ss_pred cCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEEeecCCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEec
Confidence 35679999999999999999999998887643 45555443222221 12234445 55577874 6789999999998
Q ss_pred Cc---ccCC----CCceeeccccce---------ee---ceeEEeeccceeeEEee----ecee---------eeCcEEE
Q psy10160 86 TT---TEAT----SPHVYAALTHCV---------PW---SNVCLFGARSGYLKETQ----NGGY---------LVPVKVN 133 (558)
Q Consensus 86 ~~---~~~~----~~~~~~g~~~~~---------~~---~~~~~~~~~~~~~~~~~----~~~~---------~~p~~~~ 133 (558)
+. .... ..+......+.+ .- .+.|.+.+..+...... ...+ ..+|.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~- 217 (395)
T 1bih_A 139 LSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY- 217 (395)
T ss_dssp ETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE-
T ss_pred CCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee-
Confidence 61 1110 111110000011 11 34455544433211100 0000 012333
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC-ceEEEc---cCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG-VHYRIT---ESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~---~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
.+....+.+|+.+.|.|.+.|+|.|.+.|+|++..+.... .++... ...+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 218 -~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 296 (395)
T 1bih_A 218 -VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKP 296 (395)
T ss_dssp -ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSC
T ss_pred -cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCc
Confidence 3567788999999999999999999999999999886532 233221 12379999999999999999999999997
Q ss_pred eE-EEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhccc
Q psy10160 210 EN-AVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSR 288 (558)
Q Consensus 210 ~~-~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~gr 288 (558)
.. .+.|.|..+| .+...+ .... .+.. +......|.+.|.|+|.+.|++++....... -....+.
T Consensus 297 ~~~~~~l~V~~~P---~~~~~~---~~~~-----~~~~---g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~-~~~~~~~ 361 (395)
T 1bih_A 297 QKHSLKLTVVSAP---KYEQKP---EKVI-----VVKQ---GQDVTIPCKVTGLPAPNVVWSHNAKPLSGGR-ATVTDSG 361 (395)
T ss_dssp EEEEEEEEEEEEE---EEEECC---CSEE-----EECT---TSCEEEECEEEEESCCCCEEEETTEECCSSS-EEEETTE
T ss_pred eEEEEEEEEEcCC---ccccCC---Ccce-----EecC---CCeEEEEEEECcccCCeeEEEECCEECCCCc-eEEECCE
Confidence 65 8899997543 222111 1001 1222 3334456666689999999999976543221 1111234
Q ss_pred ccchhhhhhhHHHhhc
Q psy10160 289 RSLSVVNKWSLRQAFT 304 (558)
Q Consensus 289 th~q~a~~~t~g~~~~ 304 (558)
..+..+.....|.|..
T Consensus 362 L~i~~~~~~d~G~Y~C 377 (395)
T 1bih_A 362 LVIKGVKNGDKGYYGC 377 (395)
T ss_dssp EEESSCCSTTCEEEEE
T ss_pred EEEeeCCcccCEEEEE
Confidence 4445555555555443
No 54
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.87 E-value=4.5e-22 Score=195.99 Aligned_cols=206 Identities=14% Similarity=0.170 Sum_probs=141.6
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCcc-CCCCcc--ccC-ceeEEec-cCCCCCCcEEEEeC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKV-ADPNAI--DYG-TILSSAF-PSESASPVVTQTTT 85 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~-~~~~~v--~~~-~~~~~~~-~~~~p~p~v~W~~~ 85 (558)
+++|.|.+++.+|+|.|+|.|.|..+... +..+.+.+.|.... ..+..+ ..+ .+.+.|. ..+.|.|.++|+++
T Consensus 73 ~~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~ 152 (308)
T 4fom_A 73 DATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGD 152 (308)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCC
T ss_pred ceEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEEC
Confidence 46899999999999999999998644332 45666666554332 222222 223 4456665 56789999999999
Q ss_pred CcccCCCCceeec-c---ccce---------eeceeEEeeccce--eeEEeeeceeeeCcEEEecC-CceEeeCCCcEEE
Q psy10160 86 TTTEATSPHVYAA-L---THCV---------PWSNVCLFGARSG--YLKETQNGGYLVPVKVNITL-ETQVFGVGSDISI 149 (558)
Q Consensus 86 ~~~~~~~~~~~~g-~---~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~~~-~~~~v~~G~~v~L 149 (558)
+..+......... . ...+ .-.+.|.+.+..+ .......+.+..+|.+...+ ....+.+|+.+.|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l 232 (308)
T 4fom_A 153 LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNL 232 (308)
T ss_dssp SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEE
T ss_pred CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEE
Confidence 8776543221100 0 0001 1135677766543 23334445556677765544 4455678899999
Q ss_pred EeEeeccCCC-eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 150 PCDVDGYPIP-QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 150 ~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
.|.+.|+|.| .+.|+|++..+.... ....+..|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++|
T Consensus 233 ~C~~~g~P~p~~v~W~k~~~~~~~~~---~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 233 KCNADANPPPFKSVWSRLDGQWPDGL---LASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp ECCEEEESCEEEEECCBSSSCCCSSC---BCSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred EEEEecCCCCcEEEEEECCeECCCcE---EEcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 9999999999 599999998876532 12333457788999999999999999999999999999998765
No 55
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.87 E-value=8.8e-21 Score=193.03 Aligned_cols=274 Identities=17% Similarity=0.153 Sum_probs=167.7
Q ss_pred eEecCCeEEEcCCCCCC------CEEEEEEEEeCCcceE--EEEEEEEeCCCCccCC-CCccccC-ceeEEeccCCCCC-
Q psy10160 9 YELNKNMLTIKRVEPER------LGAYTCQAYNGLGRAV--SWTVTLQALPSEKVAD-PNAIDYG-TILSSAFPSESAS- 77 (558)
Q Consensus 9 ~~~~~~~L~I~~v~~~D------~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~-~~~v~~~-~~~~~~~~~~~p~- 77 (558)
....+++|.|.+++.+| +|.|+|.|.|..|... .+.+.+.+.|...... +..+..| .+.+.|...+.+.
T Consensus 54 ~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~ 133 (388)
T 2v5m_A 54 QISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVAD 133 (388)
T ss_dssp EECSTTEEEECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEETTSCEEECCBCCTTTTT
T ss_pred EEcCCceEEecccChhhccccccCceEEEEEEccCCeEEecceEEEEccccccccCccceeeecCCcEEEEEECcCCCCC
Confidence 34578899999999998 9999999999998764 4555555555443332 2234444 6668888877643
Q ss_pred --CcEEEEeCCcccCCC-----Cce----------------ee-ccccceeeceeEE-eec--cceeeEEeeeceeeeCc
Q psy10160 78 --PVVTQTTTTTTEATS-----PHV----------------YA-ALTHCVPWSNVCL-FGA--RSGYLKETQNGGYLVPV 130 (558)
Q Consensus 78 --p~v~W~~~~~~~~~~-----~~~----------------~~-g~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~p~ 130 (558)
+.+.|++++..+... .+. .. |.|.|.+.+.... ... ....+..........|.
T Consensus 134 ~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~ 213 (388)
T 2v5m_A 134 FVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPR 213 (388)
T ss_dssp TEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEE
T ss_pred CcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCc
Confidence 789999997655321 111 12 5555554432110 000 00111111100001111
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec-----cCCceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE-----NDGVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~-----~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
..........+.+|+.+.|.|.+.|+|.|.+.|+|++..+. ....++. ..+++|.|.+++.+|+|.|+|.|.|.
T Consensus 214 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~ 292 (388)
T 2v5m_A 214 TPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK-QVSGTLIIKDAVVEDSGKYLCVVNNS 292 (388)
T ss_dssp CCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEE-EETTEEEESSCCGGGCEEEEEEEECS
T ss_pred CccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCcee-cccCEEEECcCCHHHCeEEEEEEecC
Confidence 11223345567899999999999999999999999753221 1112333 24578999999999999999999999
Q ss_pred CceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhh
Q psy10160 206 YTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKR 285 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~ 285 (558)
.|..+..+.|.|..++. +...+ . ...+..|.... ..|.+.|.|+|.+.|++++......
T Consensus 293 ~g~~~~~~~l~V~~~p~---~~~~~---~------~~~v~~g~~~~---l~C~~~g~p~p~i~W~~~g~~i~~~------ 351 (388)
T 2v5m_A 293 VGGESVETVLTVTAPLS---AKIDP---P------TQTVDFGRPAV---FTCQYTGNPIKTVSWMKDGKAIGHS------ 351 (388)
T ss_dssp SCEEEEEEEEEEEEEEE---EEEES---S------EEEECTTSCEE---EEEEEEEECCCEEEEEETTEECSCC------
T ss_pred CCceeEEEEEEEeCCCc---cccCC---C------cEEecCCCCEE---EEEEeccccCCeEEEEECCEECccC------
Confidence 99999999999976541 11100 0 11223333344 4555568999999999997654321
Q ss_pred cccccchhhhhhhHHHhhc
Q psy10160 286 RSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 286 ~grth~q~a~~~t~g~~~~ 304 (558)
.+..++..+.....|.|..
T Consensus 352 ~~~L~i~~v~~~d~G~Y~C 370 (388)
T 2v5m_A 352 ESVLRIESVKKEDKGMYQC 370 (388)
T ss_dssp SSEEEESSCCGGGCEEEEE
T ss_pred CCEEEEecCChhhCEEEEE
Confidence 1334444555555555543
No 56
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.87 E-value=3.3e-21 Score=187.78 Aligned_cols=207 Identities=14% Similarity=0.087 Sum_probs=139.0
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeCCCCccCCCCc--cccC-ceeEEeccCCCCCCc-EEEEeC-
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQALPSEKVADPNA--IDYG-TILSSAFPSESASPV-VTQTTT- 85 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~p~~~~~~~~~--v~~~-~~~~~~~~~~~p~p~-v~W~~~- 85 (558)
.+++|.|.+++.+|+|.|+|.+.|..|.. .+..|.|..+|......+.. +..| .+.+.|...+.+.+. +.|++.
T Consensus 49 ~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~ 128 (289)
T 3ejj_X 49 PGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREG 128 (289)
T ss_dssp SCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGG
T ss_pred CccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecC
Confidence 56799999999999999999999877654 35666666655543333332 3444 566889888877766 999874
Q ss_pred CcccCCCCce----------------eeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEE
Q psy10160 86 TTTEATSPHV----------------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISI 149 (558)
Q Consensus 86 ~~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L 149 (558)
+..+....+. ..|.|.|.+.++....... ............+|.+...+....+.+|+.+.|
T Consensus 129 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~--~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l 206 (289)
T 3ejj_X 129 GRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTST--GIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQI 206 (289)
T ss_dssp GEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECC--CEEEEEESSCCCCCEEEEESSSEECCSSSCEEE
T ss_pred CeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccc--cEEEEEEECCCCCCeEEecCCceEEEeCCcEEE
Confidence 4444333222 1355555544221111111 111111111225788888888888889999999
Q ss_pred EeEeec-cCCCeEEEEECCEEeccCCceE----EEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 150 PCDVDG-YPIPQVFWYKDGQVIENDGVHY----RITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 150 ~C~~~g-~P~p~i~W~~~g~~l~~~~~~~----~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
.|.+.| .|.|.+.|++++..+....... ....+++|.|.+++.+|+|.|+|.|.|..|....++.|.+...
T Consensus 207 ~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~ 282 (289)
T 3ejj_X 207 VCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282 (289)
T ss_dssp EEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC--
T ss_pred EEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEec
Confidence 999999 7999999999999886532110 0112458999999999999999999999999999999998543
No 57
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.87 E-value=7.5e-21 Score=193.18 Aligned_cols=205 Identities=20% Similarity=0.246 Sum_probs=150.3
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE------EEEEEEEe------CCCCccCCCC--ccccC-ceeEEeccCCCC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV------SWTVTLQA------LPSEKVADPN--AIDYG-TILSSAFPSESA 76 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~------s~~l~V~~------~p~~~~~~~~--~v~~~-~~~~~~~~~~~p 76 (558)
.+++|.|.+++.+|+|.|+|.+.|..|... ...+.|.. .|......+. .+..| .+.+.|...+.|
T Consensus 156 ~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p 235 (382)
T 1cs6_A 156 TTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNP 235 (382)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEES
T ss_pred CceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCC
Confidence 447999999999999999999999775331 12333321 1222222222 23344 566889988999
Q ss_pred CCcEEEEeCCcccCCCCcee------eccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEE
Q psy10160 77 SPVVTQTTTTTTEATSPHVY------AALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIP 150 (558)
Q Consensus 77 ~p~v~W~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~ 150 (558)
.|.+.|++++..+....... ........-.|.|.+.+..+.......+.+..+|.+...+....+.+|+.+.|.
T Consensus 236 ~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~ 315 (382)
T 1cs6_A 236 VPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWS 315 (382)
T ss_dssp CCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEE
T ss_pred CCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEE
Confidence 99999999887654311100 000011122456666666666666666667778888888888889999999999
Q ss_pred eEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 151 CDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 151 C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|.+.|.|.|.+.|+|+|..+.... ++.+ .+++|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 316 C~~~g~p~p~v~W~~~g~~~~~~~-~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 316 CVASGKPRPAVRWLRDGQPLASQN-RIEV-SGGELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp CEEEEESCCEEEEEETTEECCCCS-SEEE-ETTEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeeeecCCEEEEEECCEECCCCc-eEEE-ECCEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 999999999999999999987654 5554 45789999999999999999999999999999999985
No 58
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.87 E-value=7.6e-22 Score=198.02 Aligned_cols=214 Identities=16% Similarity=0.144 Sum_probs=114.8
Q ss_pred CCceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCC---CC--ccccC-ceeEEecc-----C
Q psy10160 6 SENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVAD---PN--AIDYG-TILSSAFP-----S 73 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~---~~--~v~~~-~~~~~~~~-----~ 73 (558)
..|+...+++|.|.+++.+|+|.|+|.|.|..|... +..|.|...+...... +. .+..| .+.+.|.. .
T Consensus 71 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~ 150 (349)
T 4dep_C 71 ENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFP 150 (349)
T ss_dssp GGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSC
T ss_pred CceEeecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCccccc
Confidence 456667788999999999999999999999887664 5667776654332211 11 23445 46677864 7
Q ss_pred CCCCCcEEEEeCCcccCCCCceeecc--------ccceeeceeEEeeccc-eee---EEeeeceeee------CcEEEec
Q psy10160 74 ESASPVVTQTTTTTTEATSPHVYAAL--------THCVPWSNVCLFGARS-GYL---KETQNGGYLV------PVKVNIT 135 (558)
Q Consensus 74 ~~p~p~v~W~~~~~~~~~~~~~~~g~--------~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~------p~~~~~~ 135 (558)
+.|.|.+.|++++..+.......... .....-.|.|.+.+.. +.. .......+.. +|.+..+
T Consensus 151 g~p~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~ 230 (349)
T 4dep_C 151 SSVKPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSP 230 (349)
T ss_dssp TTSCCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC--
T ss_pred CCCCceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecC
Confidence 78999999999988775533221100 0001113445555443 111 1222222222 5666555
Q ss_pred CCce--EeeCCCcEEEEeEee----ccCCCeEEEEECCEEeccCCceEEEc------------cCCeEEEccCCCCCC-e
Q psy10160 136 LETQ--VFGVGSDISIPCDVD----GYPIPQVFWYKDGQVIENDGVHYRIT------------ESNRLHINQANATDS-G 196 (558)
Q Consensus 136 ~~~~--~v~~G~~v~L~C~~~----g~P~p~i~W~~~g~~l~~~~~~~~~~------------~~~sL~I~~v~~~D~-G 196 (558)
+... .+.+|+.+.|.|.+. |.|.|.+.|+++|..+.....++... ..++|.|.+++.+|+ |
T Consensus 231 ~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G 310 (349)
T 4dep_C 231 NDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKR 310 (349)
T ss_dssp --------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC------------
T ss_pred CCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCC
Confidence 4433 678999999999999 67999999999998876522222221 123599999999999 9
Q ss_pred EEEEEEEeCCceeeEEEEEEEec
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
.|+|.|.|..|.....+.|.|..
T Consensus 311 ~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 311 SYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp -CEEEEECSSCEEEEECC-----
T ss_pred cEEEEEEcCCCcEEEEEEEeeec
Confidence 99999999999999999999854
No 59
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.87 E-value=7.6e-21 Score=193.51 Aligned_cols=202 Identities=21% Similarity=0.306 Sum_probs=149.6
Q ss_pred CceE-ecCCeEEEcCCCCCCC-EEEEEEEEeCCcceEE-----EEEEEEeCC-----C--CccCCCCccccC-ceeEEec
Q psy10160 7 ENYE-LNKNMLTIKRVEPERL-GAYTCQAYNGLGRAVS-----WTVTLQALP-----S--EKVADPNAIDYG-TILSSAF 71 (558)
Q Consensus 7 ~r~~-~~~~~L~I~~v~~~D~-G~Y~C~a~n~~g~~~s-----~~l~V~~~p-----~--~~~~~~~~v~~~-~~~~~~~ 71 (558)
.++. ..+++|.|.+++.+|+ |.|+|.+.|..+.... ..+.|..+. . .....+..+..| .+.+.|.
T Consensus 156 ~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~ 235 (388)
T 2v5m_A 156 GKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCP 235 (388)
T ss_dssp TTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCC
T ss_pred CcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEE
Confidence 4554 3568999999999999 9999999997654321 245555431 1 112233344444 5668898
Q ss_pred cCCCCCCcEEEEeCCcccCC------CCceeeccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecC
Q psy10160 72 PSESASPVVTQTTTTTTEAT------SPHVYAALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITL 136 (558)
Q Consensus 72 ~~~~p~p~v~W~~~~~~~~~------~~~~~~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 136 (558)
..+.|.|.+.|++++..... ..+... ....+ .-.|.|.+.|..+.......+.+..||.+...+
T Consensus 236 ~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~ 314 (388)
T 2v5m_A 236 AQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-VSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDP 314 (388)
T ss_dssp CEEESCCEEEEEEECTTSSCEEECCCSSSEEE-ETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEES
T ss_pred CCCCCCCEEEEEecCCCCcccccccccCceec-ccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCC
Confidence 88899999999998543321 111110 01111 224567777777766666667777888888888
Q ss_pred CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
....+.+|+.+.|.|.+.|+|.|.+.|+|+|..+..+ +++|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 315 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~--------~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 386 (388)
T 2v5m_A 315 PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS--------ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELK 386 (388)
T ss_dssp SEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC--------SSEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEE
T ss_pred CcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC--------CCEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEE
Confidence 8888999999999999999999999999999987542 46899999999999999999999999999999988
Q ss_pred E
Q psy10160 217 V 217 (558)
Q Consensus 217 V 217 (558)
|
T Consensus 387 V 387 (388)
T 2v5m_A 387 L 387 (388)
T ss_dssp E
T ss_pred e
Confidence 7
No 60
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.86 E-value=2.2e-21 Score=191.18 Aligned_cols=203 Identities=16% Similarity=0.153 Sum_probs=138.7
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEe------------CCCCccCCC--CccccC-ceeEEeccC-CCCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQA------------LPSEKVADP--NAIDYG-TILSSAFPS-ESAS 77 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~------------~p~~~~~~~--~~v~~~-~~~~~~~~~-~~p~ 77 (558)
.+|.|.+++.+|+|.|+|.+.|..|...+..+.|.. .|......+ ..+..| .+.+.|... +.|.
T Consensus 58 ~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~ 137 (312)
T 2y23_A 58 TKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGN 137 (312)
T ss_dssp EEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSS
T ss_pred EEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCC
Confidence 599999999999999999999998876666655542 444333222 223344 566888888 8899
Q ss_pred CcEEEEeCCcccCCCCceeecc-----cccee---------eceeEEeeccceeeEEeeec-------------------
Q psy10160 78 PVVTQTTTTTTEATSPHVYAAL-----THCVP---------WSNVCLFGARSGYLKETQNG------------------- 124 (558)
Q Consensus 78 p~v~W~~~~~~~~~~~~~~~g~-----~~~~~---------~~~~~~~~~~~~~~~~~~~~------------------- 124 (558)
|.+.|++++..+..+.+..... ...+. -.|.|.+.+...........
T Consensus 138 ~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (312)
T 2y23_A 138 AKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEW 217 (312)
T ss_dssp CEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccch
Confidence 9999999988776654332110 00011 13455554432222111110
Q ss_pred eeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEECCEEeccCCceEEEccC-CeEEEccCCCCCCeEEEEEE
Q psy10160 125 GYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVIENDGVHYRITES-NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 125 ~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~-~sL~I~~v~~~D~G~Y~C~a 202 (558)
....+|.+.... ...+.+|+.+.|.|.+.|.|.| .+.|+|++..+..+. ++.+..+ ++|.|.+++.+|+|.|+|.|
T Consensus 218 ~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~-~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 295 (312)
T 2y23_A 218 IRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-KHDFKDGICTLLITEFSKKDAGIYEVIL 295 (312)
T ss_dssp HHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEEC-CC----CEEEEEECSCSGGGCEEEEEEE
T ss_pred hhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCC-cEEEECCEEEEEECcCCHHHCEEEEEEE
Confidence 001234444333 3678899999999999999998 999999999987543 4444333 58999999999999999999
Q ss_pred EeCCceeeEEEEEEEe
Q psy10160 203 SNSYTSDENAVTIRVE 218 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~ 218 (558)
.|..|....++.|.|+
T Consensus 296 ~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 296 KDDRGKDKSRLKLVDE 311 (312)
T ss_dssp ESTTCCEEEEEEECSC
T ss_pred EcCCCceeeeeEEEec
Confidence 9999999999888764
No 61
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.86 E-value=3.4e-20 Score=201.85 Aligned_cols=262 Identities=13% Similarity=0.173 Sum_probs=172.7
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCC--ccccC-ceeEEeccCCCCCCcEEEEeCC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPN--AIDYG-TILSSAFPSESASPVVTQTTTT 86 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~--~v~~~-~~~~~~~~~~~p~p~v~W~~~~ 86 (558)
.+++|.|.+++.+|+|.|+|.+.|..|... .+.|.|...|......+. .+..| .+.+.|...+.|.|.+.|++++
T Consensus 162 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g 241 (642)
T 1e07_A 162 GNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNG 241 (642)
T ss_pred CCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECC
Confidence 467999999999999999999999888653 456666665554333332 23444 5668999989999999999998
Q ss_pred cccCCCCce--------eeccccceeeceeEEeeccceeeEEe--eeceeee---CcEEEecCCceEeeCCCcEEEEeEe
Q psy10160 87 TTEATSPHV--------YAALTHCVPWSNVCLFGARSGYLKET--QNGGYLV---PVKVNITLETQVFGVGSDISIPCDV 153 (558)
Q Consensus 87 ~~~~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---p~~~~~~~~~~~v~~G~~v~L~C~~ 153 (558)
..+...... ..|.|.|.+.+. .+..... ....+.. +|.+. .+....+..|+.+.|.|.+
T Consensus 242 ~~i~~~~~L~i~~~~~~d~G~Y~C~a~n~-------~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~~~~g~~v~l~C~~ 313 (642)
T 1e07_A 242 TFQQSTQELFIPNITVNNSGSYTCQAHNS-------DTGLNRTTVTTITVYAEPPKPFIT-SNNSNPVEDEDAVALTCEP 313 (642)
T ss_pred eEcccCCceEEecccccCCeEEEEEEEeC-------CCceEEeeeEEEEEEccCCCCEEE-cCCceeEecCCcEEEEEEC
Confidence 776543322 245666555543 3221111 1111211 23332 2334455668889999999
Q ss_pred eccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCc
Q psy10160 154 DGYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPL 231 (558)
Q Consensus 154 ~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~ 231 (558)
.|.| |.+.|+++|..+..+. ++.+. .+++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..++..+... +
T Consensus 314 ~~~p-~~v~W~~~g~~l~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~--~- 388 (642)
T 1e07_A 314 EIQN-TTYLWWVNNQSLPVSP-RLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTIS--P- 388 (642)
T ss_pred CCCC-ccEEEEECCccCCCcC-CEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCCCCCeec--C-
Confidence 9987 7999999999887654 44443 45789999999999999999999999875 466888887544322211 1
Q ss_pred cccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhhhhhhHHHhhc
Q psy10160 232 FANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
.. .. +.. +......|.+.|.|+|.+.|++++..... .+...+..+.+...|.|..
T Consensus 389 -~~-~~------~~~---g~~~~l~C~~~g~p~~~i~W~~~g~~~~~-------~~~L~i~~~~~~d~G~Y~C 443 (642)
T 1e07_A 389 -SY-TY------YRP---GVNLSLSCHAASNPPAQYSWLIDGNIQQH-------TQELFISNITEKNSGLYTC 443 (642)
T ss_pred -Cc-eE------ecC---CCcEEEEEEcCccCCCeEEEEECCEEcCC-------CceEEEccCChhhCeEEEE
Confidence 11 11 122 34445667777999999999998754321 1234444555555555543
No 62
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.86 E-value=1.3e-20 Score=187.40 Aligned_cols=212 Identities=18% Similarity=0.271 Sum_probs=148.5
Q ss_pred CCceEe-----cCCeEEEcCCCCCCCEEEEEE-EEeCCcceE-EEEEEEEeCCCCccC-CC--CccccC---c-eeEEec
Q psy10160 6 SENYEL-----NKNMLTIKRVEPERLGAYTCQ-AYNGLGRAV-SWTVTLQALPSEKVA-DP--NAIDYG---T-ILSSAF 71 (558)
Q Consensus 6 ~~r~~~-----~~~~L~I~~v~~~D~G~Y~C~-a~n~~g~~~-s~~l~V~~~p~~~~~-~~--~~v~~~---~-~~~~~~ 71 (558)
.+|+.+ .+++|.|.+++.+|+|.|+|. +.|..|... +..+.|...|..... .+ ..+..| + +.+.|.
T Consensus 79 ~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~ 158 (331)
T 3u83_A 79 RERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCT 158 (331)
T ss_dssp TTTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEE
T ss_pred CCceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEE
Confidence 456665 357899999999999999998 455556443 567777766654222 12 223444 3 567886
Q ss_pred -cCCCCCCcEEEEeCCcccCC-------CCcee-ecc------ccceeeceeEEeeccceeeEEeeeceeeeCcEEEec-
Q psy10160 72 -PSESASPVVTQTTTTTTEAT-------SPHVY-AAL------THCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNIT- 135 (558)
Q Consensus 72 -~~~~p~p~v~W~~~~~~~~~-------~~~~~-~g~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~- 135 (558)
..+.|.|.+.|++++..... ..... ... .....-.+.|.+.+..+.......+.+..+|.+...
T Consensus 159 ~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~ 238 (331)
T 3u83_A 159 SANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEG 238 (331)
T ss_dssp EEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEEC
T ss_pred ecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEec
Confidence 88889999999996332211 11110 000 001112456777777666666666677777777644
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCe-EEEEECCEEeccCCceEEEccCCeEEEc-cCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQ-VFWYKDGQVIENDGVHYRITESNRLHIN-QANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~sL~I~-~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
+....+.+|+.+.|.|.+.|+|.|. +.|++++..+.... ...+++|.|. +++.+|+|.|+|.|.|..|..+..+
T Consensus 239 ~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~----~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~ 314 (331)
T 3u83_A 239 FDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGV----EAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQV 314 (331)
T ss_dssp CCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE----EEETTEEEECSCCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred CCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccc----eecCcEEEEeCCCccccCeEEEEEEEeccccceEEE
Confidence 4455688999999999999999998 99999998876431 2256789999 9999999999999999999999999
Q ss_pred EEEEeccC
Q psy10160 214 TIRVEGIF 221 (558)
Q Consensus 214 ~l~V~~~~ 221 (558)
.|.|.+..
T Consensus 315 ~l~V~~~~ 322 (331)
T 3u83_A 315 EVNITEAA 322 (331)
T ss_dssp EECCBC--
T ss_pred EEEEeccc
Confidence 99997543
No 63
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.86 E-value=5.2e-21 Score=203.02 Aligned_cols=256 Identities=13% Similarity=0.123 Sum_probs=154.4
Q ss_pred CceEec----CCeEEEcCCCCCCCEEEEEEEEeCCcce----EEEEEEEEe----CCCCccCCCC-c-cccCceeEEecc
Q psy10160 7 ENYELN----KNMLTIKRVEPERLGAYTCQAYNGLGRA----VSWTVTLQA----LPSEKVADPN-A-IDYGTILSSAFP 72 (558)
Q Consensus 7 ~r~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~g~~----~s~~l~V~~----~p~~~~~~~~-~-v~~~~~~~~~~~ 72 (558)
+|+... ..+|.|.+++.+|+|.|+|.+.|..|.. ....+.|.. +|.....++. . ..++.+.+.|.+
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~ 138 (523)
T 2rcj_C 59 TRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLI 138 (523)
T ss_pred CcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEe
Confidence 566532 2489999999999999999999987632 234555532 2322222222 1 234567789999
Q ss_pred CCCCCC--cEEEEeCCcccCCCCcee------ecccc---ce---------eeceeEEeeccceeeEEeeec----eeee
Q psy10160 73 SESASP--VVTQTTTTTTEATSPHVY------AALTH---CV---------PWSNVCLFGARSGYLKETQNG----GYLV 128 (558)
Q Consensus 73 ~~~p~p--~v~W~~~~~~~~~~~~~~------~g~~~---~~---------~~~~~~~~~~~~~~~~~~~~~----~~~~ 128 (558)
.+.|+| .++|++++..+..+.... .+.|. .+ .-.|.|.+.+..+........ ....
T Consensus 139 ~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~ 218 (523)
T 2rcj_C 139 SDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTK 218 (523)
T ss_pred ccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCc
Confidence 888765 899999987765432211 11111 01 113456666554432222111 1234
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCCceEEEcc------CCeEEEccCCCCCCeEEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDGVHYRITE------SNRLHINQANATDSGEYRC 200 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~------~~sL~I~~v~~~D~G~Y~C 200 (558)
+|.+........+.+|+.+.|.|.+.|. |.| .|.|+|++..+........... .++|.|.++..+| |.|+|
T Consensus 219 ~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C 297 (523)
T 2rcj_C 219 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 297 (523)
T ss_pred CCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEE
Confidence 5555544444556899999999999987 888 8999999977542110001112 2379999999999 99999
Q ss_pred EEEeCCceeeEEEEEEEeccCCCCCC-CCCCccccceeEEeceeeecccceeEEEEeccCCCCCC----Ccccccchhhh
Q psy10160 201 VASNSYTSDENAVTIRVEGIFIHPSC-RDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP----SYGPHIKRAVE 275 (558)
Q Consensus 201 ~a~N~~G~~~~~~~l~V~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~----~~~~w~~~~l~ 275 (558)
.|.|..|.......|.|... |.. ...+. .... +..|.... ..|.+.|.++ +.+.|++++..
T Consensus 298 ~a~n~~g~~~~~~~l~v~~~---P~~~~~~p~--~~~~------v~~g~~~~---l~C~~~g~~p~~~~~~v~W~k~g~~ 363 (523)
T 2rcj_C 298 NVNHKPSNTKVDKRVEPLSL---PSVFLFPPK--PKDT------LMISRTPE---VTCVVVDVSHEDPQVKFNWYVDGVQ 363 (523)
T ss_pred EEEeCCCCcceEEecCCCcC---ceEEecCCC--chhh------cccCCceE---EEEEEecccCCCCceEEEEEECCeE
Confidence 99999999877777666422 221 11110 0000 12223334 4555556543 48999999866
Q ss_pred hh
Q psy10160 276 AE 277 (558)
Q Consensus 276 ~~ 277 (558)
..
T Consensus 364 l~ 365 (523)
T 2rcj_C 364 VH 365 (523)
T ss_pred cc
Confidence 54
No 64
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=3.6e-21 Score=191.79 Aligned_cols=214 Identities=19% Similarity=0.262 Sum_probs=111.8
Q ss_pred CceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCC---------------------CccCCC------
Q psy10160 7 ENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPS---------------------EKVADP------ 58 (558)
Q Consensus 7 ~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~---------------------~~~~~~------ 58 (558)
.|+.+.+++|.|.+++.+|+|.|+|.+.|. |... +..|.|...+. ....+.
T Consensus 54 ~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~ 132 (334)
T 1ry7_B 54 ERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKL 132 (334)
T ss_dssp ------------------------------------------------------------------CCCCSCCTTCCCCE
T ss_pred ccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEecccccccee
Confidence 455667789999999999999999999998 5442 45555543321 111111
Q ss_pred CccccC-ceeEEeccCCCCCCcEEEEeCCcccCCCCcee----eccccce---------eeceeEEeeccceeeEEeeec
Q psy10160 59 NAIDYG-TILSSAFPSESASPVVTQTTTTTTEATSPHVY----AALTHCV---------PWSNVCLFGARSGYLKETQNG 124 (558)
Q Consensus 59 ~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~----~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 124 (558)
..+..| .+.+.|...+.|.|.+.|++++..+....+.. ......+ .-.|.|.+.+..+.......+
T Consensus 133 ~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l 212 (334)
T 1ry7_B 133 LAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 212 (334)
T ss_dssp EEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEE
T ss_pred EEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEE
Confidence 123334 56789999999999999999987765543221 0000111 113456666655544444333
Q ss_pred eeee----CcEEEe-cCCceEeeCCCcEEEEeEeeccCCCeEEEEE----CCEEeccCCce-EEEcc----------CCe
Q psy10160 125 GYLV----PVKVNI-TLETQVFGVGSDISIPCDVDGYPIPQVFWYK----DGQVIENDGVH-YRITE----------SNR 184 (558)
Q Consensus 125 ~~~~----p~~~~~-~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~----~g~~l~~~~~~-~~~~~----------~~s 184 (558)
.+.. +|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|+| +|..+..++.. +.+.. ..+
T Consensus 213 ~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (334)
T 1ry7_B 213 DVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEV 292 (334)
T ss_dssp EEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCC
T ss_pred EEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccE
Confidence 3332 233332 3467778999999999999999999999999 67666544321 11111 137
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 185 LHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 185 L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
|.|.+++.+|+|.|+|.|.|..|....++.|.|...+
T Consensus 293 L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 329 (334)
T 1ry7_B 293 LSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAE 329 (334)
T ss_dssp EEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSC
T ss_pred EEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECC
Confidence 9999999999999999999999999999999997544
No 65
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.86 E-value=2.1e-20 Score=185.94 Aligned_cols=206 Identities=12% Similarity=0.036 Sum_probs=138.2
Q ss_pred ecCCeEEEcCCCCCCCE-EEEEEEEeCCcceEEEE-EEEEeCCCCccCCCC--ccc-cCceeEEeccCCCC-CCcEEEEe
Q psy10160 11 LNKNMLTIKRVEPERLG-AYTCQAYNGLGRAVSWT-VTLQALPSEKVADPN--AID-YGTILSSAFPSESA-SPVVTQTT 84 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G-~Y~C~a~n~~g~~~s~~-l~V~~~p~~~~~~~~--~v~-~~~~~~~~~~~~~p-~p~v~W~~ 84 (558)
..+++|.|.+++.+|+| .|+|.+.|..|...... ..+...|+....++. .+. +..+.+.|...+.| .|.+.|++
T Consensus 86 ~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k 165 (329)
T 3oq3_B 86 VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYK 165 (329)
T ss_dssp EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEE
T ss_pred eecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEE
Confidence 45789999999999999 99999999987654322 233333332222221 123 34677899999999 99999999
Q ss_pred CCcccCCCCceeecccccee---------eceeEEeecc--ce----eeEEeeeceeeeCc----EEEecCCceEeeCCC
Q psy10160 85 TTTTEATSPHVYAALTHCVP---------WSNVCLFGAR--SG----YLKETQNGGYLVPV----KVNITLETQVFGVGS 145 (558)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~--~~----~~~~~~~~~~~~p~----~~~~~~~~~~v~~G~ 145 (558)
++..+.............+. -.|.|.+.|. .+ .......+.+..++ .+. .+....+.+|+
T Consensus 166 ~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~ 244 (329)
T 3oq3_B 166 NNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGE 244 (329)
T ss_dssp TTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTS
T ss_pred CCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCC
Confidence 98877533222111111111 1345555543 11 11111233333333 233 66677889999
Q ss_pred cEEEEeEeeccC---CC-eEEEEECCEEeccCCceEEEc-------cCCeEEEccCCCCCCe-EEEEEEEeCCceeeEEE
Q psy10160 146 DISIPCDVDGYP---IP-QVFWYKDGQVIENDGVHYRIT-------ESNRLHINQANATDSG-EYRCVASNSYTSDENAV 213 (558)
Q Consensus 146 ~v~L~C~~~g~P---~p-~i~W~~~g~~l~~~~~~~~~~-------~~~sL~I~~v~~~D~G-~Y~C~a~N~~G~~~~~~ 213 (558)
.+.|.|.+.|.| .| .+.|++++..+...+.+.... ..++|.|.+++.+|+| .|+|.|.|..|.....+
T Consensus 245 ~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~ 324 (329)
T 3oq3_B 245 PANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTT 324 (329)
T ss_dssp CEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEE
T ss_pred CEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEE
Confidence 999999999998 77 889999998753322222111 2457999999999999 99999999999999988
Q ss_pred EEEE
Q psy10160 214 TIRV 217 (558)
Q Consensus 214 ~l~V 217 (558)
.|.|
T Consensus 325 ~l~v 328 (329)
T 3oq3_B 325 TVVL 328 (329)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8877
No 66
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.85 E-value=2.7e-20 Score=189.85 Aligned_cols=209 Identities=17% Similarity=0.242 Sum_probs=150.4
Q ss_pred CCceEe-cCCeEEEcCCCCCCCE---EEEEEEEeCCcceE-EEEE-EEEeC--CCC---------ccCCCCccccC-cee
Q psy10160 6 SENYEL-NKNMLTIKRVEPERLG---AYTCQAYNGLGRAV-SWTV-TLQAL--PSE---------KVADPNAIDYG-TIL 67 (558)
Q Consensus 6 ~~r~~~-~~~~L~I~~v~~~D~G---~Y~C~a~n~~g~~~-s~~l-~V~~~--p~~---------~~~~~~~v~~~-~~~ 67 (558)
..++.. .+++|.|.+++.+|+| .|+|.+.|..|... .... .+... +.. .......+..| .+.
T Consensus 152 ~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~G~~v~ 231 (395)
T 1bih_A 152 DRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTM 231 (395)
T ss_dssp CTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEEECCSEEEETTSCEE
T ss_pred cccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCceecCCceEEECCCcEE
Confidence 445553 6779999999999999 99999999888742 2111 11111 100 01112223344 566
Q ss_pred EEeccCCCCCCcEEEEeCCcccCCCCc--eee--cccc-ce---------eeceeEEeeccceeeEE-eeeceeeeCcEE
Q psy10160 68 SSAFPSESASPVVTQTTTTTTEATSPH--VYA--ALTH-CV---------PWSNVCLFGARSGYLKE-TQNGGYLVPVKV 132 (558)
Q Consensus 68 ~~~~~~~~p~p~v~W~~~~~~~~~~~~--~~~--g~~~-~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~ 132 (558)
+.|...+.|.|.+.|++++..+..... ... .... .+ .-.|.|.+.+..+.... ...+.+..+|.+
T Consensus 232 l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~ 311 (395)
T 1bih_A 232 IYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKY 311 (395)
T ss_dssp EEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEE
T ss_pred EEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCcc
Confidence 899999999999999999877654321 110 0000 11 12456777776665443 556666778888
Q ss_pred EecCCc-eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 133 NITLET-QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 133 ~~~~~~-~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
...+.. ..+.+|+.+.|.|.+.|.|.|.+.|+++|..+..+ ++.+. +++|.|.+++.+|+|.|+|.|.|..|....
T Consensus 312 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~--~~~~~-~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~ 388 (395)
T 1bih_A 312 EQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG--RATVT-DSGLVIKGVKNGDKGYYGCRATNEHGDKYF 388 (395)
T ss_dssp EECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS--SEEEE-TTEEEESSCCSTTCEEEEEEEEETTEEEEE
T ss_pred ccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC--ceEEE-CCEEEEeeCCcccCEEEEEEEEccCCCceE
Confidence 887777 77899999999999999999999999999998653 55543 459999999999999999999999999999
Q ss_pred EEEEEE
Q psy10160 212 AVTIRV 217 (558)
Q Consensus 212 ~~~l~V 217 (558)
.+.|.|
T Consensus 389 ~~~l~V 394 (395)
T 1bih_A 389 ETLVQV 394 (395)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998887
No 67
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.85 E-value=2.5e-20 Score=208.69 Aligned_cols=275 Identities=17% Similarity=0.190 Sum_probs=177.1
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccC-ceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYG-TILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
.|.|.+++.+|+|.|+|.|.|..|... +..+.|...|.....+...+..| .+.+.|...+.|.|.+.|++++..+...
T Consensus 491 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~ 570 (816)
T 3dmk_A 491 YLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPIN 570 (816)
T ss_dssp EEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCS
T ss_pred EEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccC
Confidence 699999999999999999999998764 56666665554333333334444 6668999999999999999998877654
Q ss_pred Cceeecccc----------ceeeceeEEeeccceee-EEeeeceeeeCcEEE-ecCCceEeeCCCcEEEEeEeeccCCC-
Q psy10160 93 PHVYAALTH----------CVPWSNVCLFGARSGYL-KETQNGGYLVPVKVN-ITLETQVFGVGSDISIPCDVDGYPIP- 159 (558)
Q Consensus 93 ~~~~~g~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~-~~~~~~~v~~G~~v~L~C~~~g~P~p- 159 (558)
.+......+ ...-.|.|.+.+..+.. .......+..+|.+. ..+....+.+|+.+.|.|.+.+.|.|
T Consensus 571 ~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~ 650 (816)
T 3dmk_A 571 RKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPL 650 (816)
T ss_dssp TTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCC
T ss_pred CceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCC
Confidence 432211000 11223456666654422 222233333444433 33455668899999999999877665
Q ss_pred eEEEEECCEEeccCCceEE--Ec-cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccce
Q psy10160 160 QVFWYKDGQVIENDGVHYR--IT-ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCK 236 (558)
Q Consensus 160 ~i~W~~~g~~l~~~~~~~~--~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~ 236 (558)
.+.|+++|..+..+..... .. ..++|.|.+++.+|+|.|+|.|.|..|....++.|.|..+| .+...+ .+ .
T Consensus 651 ~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P---~~~~~~--~~-~ 724 (816)
T 3dmk_A 651 NIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPP---RWILEP--TD-K 724 (816)
T ss_dssp EEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEE---EEEECC--CC-E
T ss_pred EEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCC---ceeeec--cc-c
Confidence 8999999988864322111 11 23479999999999999999999999999999999997553 222111 11 1
Q ss_pred eEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-------hhhhhcccccchhhhhhhHHHhhc
Q psy10160 237 LIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-------ADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 237 ~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-------~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
. +.. +......|.+.|.|+|.+.|++++....... ......+..++..+.+...|.|..
T Consensus 725 ~------v~~---G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 790 (816)
T 3dmk_A 725 A------FAQ---GSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLC 790 (816)
T ss_dssp E------EET---TCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEE
T ss_pred e------ecC---CCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEecCCEEEECcCChhhCeEEEE
Confidence 1 122 3333455666799999999999864322110 111122345566666666666554
No 68
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.84 E-value=5.7e-21 Score=190.80 Aligned_cols=213 Identities=15% Similarity=0.212 Sum_probs=148.7
Q ss_pred CCceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCc---cCCCCccccC-ceeEEec-----cCCC
Q psy10160 6 SENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEK---VADPNAIDYG-TILSSAF-----PSES 75 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~---~~~~~~v~~~-~~~~~~~-----~~~~ 75 (558)
..|+...+++|.|.+++.+|+|.|+|.+.|..|... +..|.|...+... ...+..+..| .+.+.|. ..+.
T Consensus 73 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~ 152 (339)
T 3o4o_C 73 ETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDK 152 (339)
T ss_dssp SSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSS
T ss_pred cccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCC
Confidence 457777889999999999999999999999888653 5666666655432 1223334444 5668888 7888
Q ss_pred CCCcEEEEeCCcccCCCCceeecc--ccce---------eeceeEEeeccce----eeEEeeeceee-----eCcEEEec
Q psy10160 76 ASPVVTQTTTTTTEATSPHVYAAL--THCV---------PWSNVCLFGARSG----YLKETQNGGYL-----VPVKVNIT 135 (558)
Q Consensus 76 p~p~v~W~~~~~~~~~~~~~~~g~--~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~~-----~p~~~~~~ 135 (558)
|.|.+.|++++..+.......... ...+ .-.|.|.+.+..+ .......+.+. .+|.+...
T Consensus 153 p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~ 232 (339)
T 3o4o_C 153 TDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP 232 (339)
T ss_dssp SCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC
T ss_pred CCceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC
Confidence 999999999988776542211100 0011 1234566655443 22222333332 35666666
Q ss_pred CCceEeeCCCcEEEEeEe---eccC-CCeEEEEECCEEeccC--------CceEEEccCC------eEEEccCCCCCC-e
Q psy10160 136 LETQVFGVGSDISIPCDV---DGYP-IPQVFWYKDGQVIEND--------GVHYRITESN------RLHINQANATDS-G 196 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~---~g~P-~p~i~W~~~g~~l~~~--------~~~~~~~~~~------sL~I~~v~~~D~-G 196 (558)
+....+.+|+.+.|.|.+ .|.| .|.+.|++++..+... +.++....++ +|.|.+++.+|. |
T Consensus 233 ~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G 312 (339)
T 3o4o_C 233 LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHM 312 (339)
T ss_dssp SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCC
T ss_pred CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCc
Confidence 777788999999999999 9999 8889999999776421 2234444445 799999999997 9
Q ss_pred EEEEEEEeCCceeeEEEEEEEe
Q psy10160 197 EYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
.|+|.|.|..|..+..+.+.+.
T Consensus 313 ~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 313 DFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp CCEEEEEETTEEECCBCCCCC-
T ss_pred cEEEEEEeccCceEEEEEhhHh
Confidence 9999999999999887776653
No 69
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.84 E-value=7e-21 Score=197.13 Aligned_cols=259 Identities=13% Similarity=0.161 Sum_probs=152.7
Q ss_pred CCceEec----CCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEe---CCCCccCCCC--ccccCceeEEeccCC
Q psy10160 6 SENYELN----KNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQA---LPSEKVADPN--AIDYGTILSSAFPSE 74 (558)
Q Consensus 6 ~~r~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~---~p~~~~~~~~--~v~~~~~~~~~~~~~ 74 (558)
++|+... ..+|.|.+++.+|+|.|+|.+.|..+... ...+.|.. +|......+. .+.++.+.+.|.+.+
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g 142 (438)
T 1qgc_4 63 PDRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNN 142 (438)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEE
T ss_pred cCcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEcc
Confidence 3566542 34899999999999999999999876432 34555543 2222222222 234567778998877
Q ss_pred -CCCC-cEEEEeCCcccCCCCce-------eecccc---ce---------eeceeEEeeccceeeEEeeeceeeeCcEEE
Q psy10160 75 -SASP-VVTQTTTTTTEATSPHV-------YAALTH---CV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVN 133 (558)
Q Consensus 75 -~p~p-~v~W~~~~~~~~~~~~~-------~~g~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 133 (558)
.|.| .++|++++..+...... ..+.|. .+ .-.|.|.+.+..+............++...
T Consensus 143 ~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~ 222 (438)
T 1qgc_4 143 FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVML 222 (438)
T ss_dssp EBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEE
T ss_pred ccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEE
Confidence 6777 89999998776554100 001110 01 113456666654432111111111122223
Q ss_pred ecCCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEecc----------------CCceEEEcc-----CCeEEEc
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIEN----------------DGVHYRITE-----SNRLHIN 188 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~~----------------~~~~~~~~~-----~~sL~I~ 188 (558)
..+....+.+|+.+.|.|.+.|.| .|.+.|+|+ +..+.. ...++.+.. ..+|.|.
T Consensus 223 ~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 302 (438)
T 1qgc_4 223 VESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMS 302 (438)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEEC
Confidence 345567789999999999999998 678999996 433320 123454433 2379999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----eeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC
Q psy10160 189 QANATDSGEYRCVASNSYT-----SDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ 262 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G-----~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~ 262 (558)
+++.+|+|.|+|.|.|..+ .......|.|...+ .+|.+...+ .. ..+.. +......|.+.|.
T Consensus 303 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~--~~-------~~~~~---g~~v~L~C~~~g~ 370 (438)
T 1qgc_4 303 SLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLA--PG-------SAAAA---ASMVTLGCLVKGY 370 (438)
T ss_dssp SCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEEC--CC-------GGGCC---SSEEEEEEEEESC
T ss_pred CCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcC--cc-------ccccc---CCcEEEEEEeccc
Confidence 9999999999999999544 22344567775321 222221111 00 01112 3334455556576
Q ss_pred -CCC-cccccchhhhh
Q psy10160 263 -LPS-YGPHIKRAVEA 276 (558)
Q Consensus 263 -~~~-~~~w~~~~l~~ 276 (558)
|.| .+.|++++...
T Consensus 371 ~P~~~~v~W~~~g~~~ 386 (438)
T 1qgc_4 371 FPEPVTVTWNSGSLSS 386 (438)
T ss_dssp BSSCCEEEEGGGTCCS
T ss_pred cCCCcEEEEecCCCCC
Confidence 777 89999987554
No 70
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.83 E-value=7.7e-20 Score=188.12 Aligned_cols=198 Identities=12% Similarity=0.053 Sum_probs=128.2
Q ss_pred CCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCC-CccccC-ceeEEeccCC-CCCCcEEEEeCCcccCCCCceee-
Q psy10160 22 EPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADP-NAIDYG-TILSSAFPSE-SASPVVTQTTTTTTEATSPHVYA- 97 (558)
Q Consensus 22 ~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~-~~v~~~-~~~~~~~~~~-~p~p~v~W~~~~~~~~~~~~~~~- 97 (558)
+.+|+|.|+|.|.|..|...+..+.|.+.......++ ..+.+| .+.+.|.+.+ .|.|.++|++++..+........
T Consensus 199 ~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~ 278 (423)
T 3qs7_E 199 HELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMS 278 (423)
T ss_dssp CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEE
T ss_pred ecccCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecc
Confidence 6789999999999999987654455555433222222 224444 5668899888 67799999999887654321100
Q ss_pred --------ccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecC--CceEeeCCCcEEEEeEeeccCC
Q psy10160 98 --------ALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITL--ETQVFGVGSDISIPCDVDGYPI 158 (558)
Q Consensus 98 --------g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~v~~G~~v~L~C~~~g~P~ 158 (558)
.....+ .-.|.|.+.|. ......+.+..+|.+...+ ....+.+|+.+.|.|.+.|+|.
T Consensus 279 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~ 355 (423)
T 3qs7_E 279 TYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355 (423)
T ss_dssp EEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEESC
T ss_pred cccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcCC
Confidence 000011 11346666665 3333444555666665544 3456788999999999999999
Q ss_pred CeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCC
Q psy10160 159 PQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 159 p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p 224 (558)
|.|.|+|+|..+...... ......+.+.....+|+|.|+|.|.|..|..+.++.|.|.+.+.+|
T Consensus 356 p~i~W~k~g~~l~~~~~~--~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~~~ 419 (423)
T 3qs7_E 356 IRCTWTFSRKSFPCEQKG--LDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTKHH 419 (423)
T ss_dssp CEEEEEETTEEEECBCCB--CSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--------
T ss_pred CeEEEEECCEECCCcccc--ccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCccc
Confidence 999999999998654210 0112233336677899999999999999999999999998766443
No 71
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.83 E-value=2.3e-20 Score=194.11 Aligned_cols=236 Identities=11% Similarity=0.086 Sum_probs=142.2
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcce-------E--EEEEEEEeCCC--CccCCCCccccC-ceeEEeccCCC-C--CC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRA-------V--SWTVTLQALPS--EKVADPNAIDYG-TILSSAFPSES-A--SP 78 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~-------~--s~~l~V~~~p~--~~~~~~~~v~~~-~~~~~~~~~~~-p--~p 78 (558)
++|.|.+++.+|+|.|+|.|.|..|.. . ...+.|...+. .....+..+..| .+.+.|...+. | .|
T Consensus 142 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G~~v~l~C~~~g~~P~~~~ 221 (450)
T 1z7z_I 142 VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEA 221 (450)
T ss_dssp EEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETTSEEEEEEEEESCTTGGGC
T ss_pred eEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeCCcEEEEEEeeCCCCCCce
Confidence 589999999999999999999987642 1 12333332211 111122344445 56688998888 7 78
Q ss_pred cEEEEeCCcccCCCCceeecc---------cccee--eceeEEeeccceeeEEeeeceeee--CcEEEecCCceEeeCCC
Q psy10160 79 VVTQTTTTTTEATSPHVYAAL---------THCVP--WSNVCLFGARSGYLKETQNGGYLV--PVKVNITLETQVFGVGS 145 (558)
Q Consensus 79 ~v~W~~~~~~~~~~~~~~~g~---------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~v~~G~ 145 (558)
.+.|++++..+.......... ..... ..+.|.+.+..+.......+.+.. +|.+.. ....+.+|+
T Consensus 222 ~~~W~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~--~~~~v~~G~ 299 (450)
T 1z7z_I 222 QVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGT 299 (450)
T ss_dssp EEEEEETTEECCCEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE--SCSEEETTC
T ss_pred EEEEeCCCEeCCceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEec--CCeeEeCCC
Confidence 999999987765421110000 01111 256777777766555554444444 454443 345789999
Q ss_pred cEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc-e---eeEEEEEEEeccC
Q psy10160 146 DISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT-S---DENAVTIRVEGIF 221 (558)
Q Consensus 146 ~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G-~---~~~~~~l~V~~~~ 221 (558)
.+.|.|.+. |.|.+.| +|..+...+ ...+|.|.++..+|+|.|+|.|.|..+ . ....+.|.|..+|
T Consensus 300 ~v~l~C~~~--p~p~i~W--~g~~~~~~~------~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P 369 (450)
T 1z7z_I 300 EVTVKCEAH--PRAKVTL--NGVPAQPLG------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGP 369 (450)
T ss_dssp EEEEEEEC--------------------C------CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEE
T ss_pred cEEEEEecC--CCCEeEE--CCEEcCCCC------ceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCC
Confidence 999999998 9999999 777663222 234799999999999999999997665 3 3477888886554
Q ss_pred CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhh
Q psy10160 222 IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV 274 (558)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l 274 (558)
.+...+.+.+ ..+.. +......|.+.|.|+|.+.|++++.
T Consensus 370 ---~~~~~~~p~~-~~~~~---------g~~~~l~C~~~g~P~p~i~W~~~g~ 409 (450)
T 1z7z_I 370 ---RLDERDCPGN-WTWPE---------NSQQTPMCQAWGNPLPELKCLKDGT 409 (450)
T ss_dssp ---ECCSTTSCSE-EEEET---------TCEECCCCCCEEESCCEEEEEETTT
T ss_pred ---ceeeccCCCc-eeEcC---------CCeEEEEEecccCCCCcEEEEECCc
Confidence 2222211111 11221 4455578888899999999999976
No 72
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.82 E-value=4.9e-20 Score=179.73 Aligned_cols=200 Identities=13% Similarity=0.121 Sum_probs=132.8
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeCCCCccCCCCc--cccC-ceeEEeccCCCCC--CcEEEEeCC-
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQALPSEKVADPNA--IDYG-TILSSAFPSESAS--PVVTQTTTT- 86 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~p~~~~~~~~~--v~~~-~~~~~~~~~~~p~--p~v~W~~~~- 86 (558)
++|.|.+++.+|+|.|+|.+.|..|.. .++.|.|..++......+.. +..| .+.+.|...+ |. |.+.|++++
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~ 129 (292)
T 4dkd_C 51 SILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRG 129 (292)
T ss_dssp EEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGG
T ss_pred EEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCC
Confidence 599999999999999999999977655 35566666555433333322 3444 5567787776 54 789999974
Q ss_pred cccCCCCce----------------eeccccceeeceeEEeeccceeeEE-eeeceee----eCcEEEecCCceEeeCCC
Q psy10160 87 TTEATSPHV----------------YAALTHCVPWSNVCLFGARSGYLKE-TQNGGYL----VPVKVNITLETQVFGVGS 145 (558)
Q Consensus 87 ~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~p~~~~~~~~~~~v~~G~ 145 (558)
..+....+. ..|.| .|.+.+..+.... ...+.+. .+|.+...+....+.+|+
T Consensus 130 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y-------~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~ 202 (292)
T 4dkd_C 130 RPLMRHTNYSFSPWHGFTIHRAKFIQSQDY-------QCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGE 202 (292)
T ss_dssp CCCCSSCCEECCSSSCCEETTCCGGGCSEE-------EEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSS
T ss_pred CccccCCcccccCCceEEECCCCHHHCeEE-------EEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCC
Confidence 333332222 13444 4555444332211 2222333 388888888888888999
Q ss_pred cEEEEeEeeccCC-CeEEEEECCEEeccCCc-eEE---EccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 146 DISIPCDVDGYPI-PQVFWYKDGQVIENDGV-HYR---ITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 146 ~v~L~C~~~g~P~-p~i~W~~~g~~l~~~~~-~~~---~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
.+.|.|.+.|.|. +.+.|++++..+..... ++. ....++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.+.
T Consensus 203 ~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 203 AAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp CEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred CEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEeeC
Confidence 9999999999775 45888898876654321 111 012347999999999999999999999999999999999765
Q ss_pred C
Q psy10160 221 F 221 (558)
Q Consensus 221 ~ 221 (558)
.
T Consensus 283 ~ 283 (292)
T 4dkd_C 283 A 283 (292)
T ss_dssp -
T ss_pred C
Confidence 4
No 73
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.82 E-value=3.3e-19 Score=191.73 Aligned_cols=272 Identities=12% Similarity=0.091 Sum_probs=169.8
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCcccc-CceeEEeccCCCCC---CcEEEE-eCCcc
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDY-GTILSSAFPSESAS---PVVTQT-TTTTT 88 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~-~~~~~~~~~~~~p~---p~v~W~-~~~~~ 88 (558)
+|.|.+++.+|+|.|+|.+.|..|... ++.|.|..+++.. ..+.. ..+.+.|.. +.+. +.+.|+ +++..
T Consensus 186 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~----~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~ 260 (585)
T 2ocw_A 186 SVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL----VYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGEN 260 (585)
T ss_pred EEEEccCChhHCeEEEEEeccCCccccceEEEEEccCCCce----eEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCC
Confidence 799999999999999999999888753 5566665443221 12333 456677875 5544 567776 55521
Q ss_pred ---cCC---------CCcee------eccccce---------eeceeEEeeccceee----EEeeeceeeeCcEEEecCC
Q psy10160 89 ---EAT---------SPHVY------AALTHCV---------PWSNVCLFGARSGYL----KETQNGGYLVPVKVNITLE 137 (558)
Q Consensus 89 ---~~~---------~~~~~------~g~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~p~~~~~~~~ 137 (558)
+.. ..+.. .|.+ .+ .-.|.|.+.+..... .....+.+..+|.+...+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~ 339 (585)
T 2ocw_A 261 CDVVVNTLGKRAPAFEGRILLNPQDKDGSF-SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPT 339 (585)
T ss_pred cceEEeCCCcCCcccCCceEeeccCCCcEE-EEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCc
Confidence 100 11110 0000 11 113456555532211 1334455566777777788
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeE----EEEE--CCE--Eecc--------CCceEEEc---cCCe--EEEccCCCCCCe
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQV----FWYK--DGQ--VIEN--------DGVHYRIT---ESNR--LHINQANATDSG 196 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i----~W~~--~g~--~l~~--------~~~~~~~~---~~~s--L~I~~v~~~D~G 196 (558)
...+.+|+.+.|.|.+.|.|.|.+ .|++ +|. .+.. ...++.+. .+++ |.|.+++.+|+|
T Consensus 340 ~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G 419 (585)
T 2ocw_A 340 VVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAG 419 (585)
T ss_pred ceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCE
Confidence 888999999999999999999987 7999 886 4432 12244443 2344 999999999999
Q ss_pred EEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEec-cCCCCCCCcccccchhhh
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESC-TRAGQLPSYGPHIKRAVE 275 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~-~~~g~~~~~~~w~~~~l~ 275 (558)
.|+|.| |..|.....+.|.|...+ |.... + ... .+..|....+.|... ...|.|.+.+.|++++..
T Consensus 420 ~Y~C~a-n~~g~~~~~~~l~V~~~~--p~~~~-~--~~~-------~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~ 486 (585)
T 2ocw_A 420 FYWCLT-NGDTLWRTTVEIKIIEGE--PNLKV-P--GNV-------TAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQ 486 (585)
T ss_pred EEEEcc-cCCCccceeEEEEEecCc--ccccc-C--Cce-------eEecCCcEEEEEEecCCCCCCccEEEEEeecCce
Confidence 999999 999999999999996532 22221 1 111 122333344444432 223788999999999866
Q ss_pred hhhhh-hh----hhh------cccccchhhhhhhHHHhhcc
Q psy10160 276 AEAAA-AD----KKR------RSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 276 ~~~~~-~~----~~~------~grth~q~a~~~t~g~~~~~ 305 (558)
..... .. ... .+...+..+.....|.|...
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 527 (585)
T 2ocw_A 487 ALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCG 527 (585)
T ss_pred eeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEE
Confidence 54322 10 111 13566777778888877764
No 74
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=171.13 Aligned_cols=192 Identities=14% Similarity=0.113 Sum_probs=131.4
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccC-ceeEEecc-CCCCCCcEEEEeCCccc
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYG-TILSSAFP-SESASPVVTQTTTTTTE 89 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~-~~~~~~~~-~~~p~p~v~W~~~~~~~ 89 (558)
.+++|.|.+++.+|+|.|+|.+.|..+.. ...+.|...+.........+.+| .+.+.|.. .+.|.|.+.|++++..+
T Consensus 46 ~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~-~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~ 124 (262)
T 3rjd_A 46 STPSYRITSASVNDSGEYRCQRGLSGRSD-PIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAF 124 (262)
T ss_dssp CSSEEEESSCCGGGCEEEEEEESSSCCCC-CEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEE
T ss_pred cCCeEEEecCCcccCeEEEEEEecCCccc-cEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccc
Confidence 45789999999999999999999876653 45566655443333333344444 56678887 67888999999988665
Q ss_pred CCCC-----------ceeeccccceeeceeEEeeccceeeEEeeeceee---eCcEEEecCCceEeeCCCcEEEEeEeec
Q psy10160 90 ATSP-----------HVYAALTHCVPWSNVCLFGARSGYLKETQNGGYL---VPVKVNITLETQVFGVGSDISIPCDVDG 155 (558)
Q Consensus 90 ~~~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~v~~G~~v~L~C~~~g 155 (558)
.... ....|.|.|. +.+..+.......+.+. .+|.+...+ ...+.+|+.+.|.|.+.|
T Consensus 125 ~~~~~~~~l~i~~~~~~d~G~Y~C~-------~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~ 196 (262)
T 3rjd_A 125 KFFHWNSNLTILKTNISHNGTYHCS-------GMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKL 196 (262)
T ss_dssp EEEEECCCEEESSCCGGGCEEEEEE-------EESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCC
T ss_pred cccCCCCeEEEEECChhhCEEEEEE-------EeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEccc
Confidence 4321 1124455554 44444333333333333 345555555 556889999999999999
Q ss_pred cCC-Ce----EEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee---eEEEEEEEe
Q psy10160 156 YPI-PQ----VFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD---ENAVTIRVE 218 (558)
Q Consensus 156 ~P~-p~----i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~---~~~~~l~V~ 218 (558)
.|. |. +.|++++..+... ...++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.
T Consensus 197 ~p~~p~~~~~~~w~~~~~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 197 LLQRPGLQLYFSFYMGSKTLRGR------NTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp CCC-----EEEEEEETTEEEEEE------ESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECEE
T ss_pred CCCCCCccEEEEEEeCCcEeccc------CCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEEe
Confidence 987 64 6799999877532 245689999999999999999999999975 334555553
No 75
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.81 E-value=9.7e-19 Score=168.20 Aligned_cols=196 Identities=18% Similarity=0.168 Sum_probs=129.6
Q ss_pred eEecCCeEEEcCC---CCCCCEE--EEEEEEeCCcceE-EEEEEEEeCCCCc-cCCCCccccC-ceeEEeccCCCCCCcE
Q psy10160 9 YELNKNMLTIKRV---EPERLGA--YTCQAYNGLGRAV-SWTVTLQALPSEK-VADPNAIDYG-TILSSAFPSESASPVV 80 (558)
Q Consensus 9 ~~~~~~~L~I~~v---~~~D~G~--Y~C~a~n~~g~~~-s~~l~V~~~p~~~-~~~~~~v~~~-~~~~~~~~~~~p~p~v 80 (558)
+...++.|.|..+ +.+|+|. |+|.+.|..|... +..|.|...|... ......+.+| .+.+.|... |.|.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~~~~~v~~G~~v~l~C~~~--p~~~i 128 (265)
T 2oz4_A 51 VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH--PRAKV 128 (265)
T ss_dssp EEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEESCSEEETTCEEEEEEECC--TTSEE
T ss_pred EeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeecCCceecCCCcEEEEEEcc--CCCEE
Confidence 3345667888777 7888885 9999999988764 6677776654432 2233344555 555778776 99999
Q ss_pred EEEeCCcccCCCCcee----eccccceeeceeEEeeccc-eeeE---EeeeceeeeCcEEEec--CCceEeeCCCcEEEE
Q psy10160 81 TQTTTTTTEATSPHVY----AALTHCVPWSNVCLFGARS-GYLK---ETQNGGYLVPVKVNIT--LETQVFGVGSDISIP 150 (558)
Q Consensus 81 ~W~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~p~~~~~~--~~~~~v~~G~~v~L~ 150 (558)
+| ++..+....... ..........|.|.+.+.. +... ....+.+..+|.+... +....+.+|+.+.|.
T Consensus 129 ~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~ 206 (265)
T 2oz4_A 129 TL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPM 206 (265)
T ss_dssp EE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCC
T ss_pred EE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEE
Confidence 99 665553322111 0000000112445544322 2221 2333445566666544 446678999999999
Q ss_pred eEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 151 CDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 151 C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
|.+.|+|.|.+.|+|++..+. .++.+. .++.+|+|.|+|.|.|..|..+..+.|.|..
T Consensus 207 C~~~g~P~p~i~W~~~~~~~~---------~~g~~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 207 CQAWGNPLPELKCLKDGTFPL---------PIGESV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp CCCEEESCCEEEEEETTTEEC---------CTTSCE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eECccCCCCeEEEEECCcccC---------CCCcEE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 999999999999999987322 233343 4888999999999999999999999999964
No 76
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.80 E-value=1.1e-18 Score=173.32 Aligned_cols=204 Identities=14% Similarity=0.219 Sum_probs=128.0
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE------EEEEEEEeCCCCc-cCCC-CccccC-ceeEEeccCCCCCC--cE
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV------SWTVTLQALPSEK-VADP-NAIDYG-TILSSAFPSESASP--VV 80 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~------s~~l~V~~~p~~~-~~~~-~~v~~~-~~~~~~~~~~~p~p--~v 80 (558)
.+.+|.|.+++.+|+|.|+|.+.|..+... ...|.|.+.|... +..+ ..+..| .+.+.|.+.+.|+| .+
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v 151 (327)
T 2wng_A 72 MDFSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITL 151 (327)
T ss_dssp CBCCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEE
T ss_pred ceeEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEE
Confidence 346899999999999999999999876421 3467776665432 2222 234444 56689998888776 89
Q ss_pred EEEeCCcccCCCCcee-----eccccc------------eeeceeEEeecccee---eEEee--eceeeeCcEEEecCCc
Q psy10160 81 TQTTTTTTEATSPHVY-----AALTHC------------VPWSNVCLFGARSGY---LKETQ--NGGYLVPVKVNITLET 138 (558)
Q Consensus 81 ~W~~~~~~~~~~~~~~-----~g~~~~------------~~~~~~~~~~~~~~~---~~~~~--~~~~~~p~~~~~~~~~ 138 (558)
.|++++..+....... .+.|.. ..-.+.|.+.+..+. ..... ...+..||.+...+..
T Consensus 152 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~ 231 (327)
T 2wng_A 152 KWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP 231 (327)
T ss_dssp EEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC
T ss_pred EEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC
Confidence 9999987776433110 011110 012456777665432 22222 2234567777765554
Q ss_pred eEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 139 QVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.+.|.|.+.|.|+| .+.|+|+|..+.... ..+....++ .|.|.++..+|+|.|+|.|.|..|..
T Consensus 232 --~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 232 --VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp --CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred --cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 7899999999999996544 799999999876421 112222333 48899999999999999999999876
Q ss_pred -eEEEEEEE
Q psy10160 210 -ENAVTIRV 217 (558)
Q Consensus 210 -~~~~~l~V 217 (558)
+.++.+.+
T Consensus 310 ~s~~~~~~~ 318 (327)
T 2wng_A 310 VSKSHDLKV 318 (327)
T ss_dssp EEEEEECC-
T ss_pred chhheEEEe
Confidence 45554443
No 77
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.80 E-value=2.9e-18 Score=184.36 Aligned_cols=205 Identities=15% Similarity=0.119 Sum_probs=136.4
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcce-----EEEEEEEEeCCCCccCCCC-ccc-cCceeEEeccCCCCCCcE----EEE
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRA-----VSWTVTLQALPSEKVADPN-AID-YGTILSSAFPSESASPVV----TQT 83 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~-----~s~~l~V~~~p~~~~~~~~-~v~-~~~~~~~~~~~~~p~p~v----~W~ 83 (558)
+|.|.+++.+|+|.|+|.|.|..+.. .+..|.|...|.....+.. .+. +..+.+.|...+.|.|.+ .|+
T Consensus 291 ~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~ 370 (585)
T 2ocw_A 291 SVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWE 370 (585)
T ss_pred EEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEE
Confidence 79999999999999999999964433 4556677666554433222 233 446678999999999988 788
Q ss_pred e--CCc--ccCC---------CCceeec---cccc--e---------eeceeEEeeccceeeEEeeeceeee-CcEEEec
Q psy10160 84 T--TTT--TEAT---------SPHVYAA---LTHC--V---------PWSNVCLFGARSGYLKETQNGGYLV-PVKVNIT 135 (558)
Q Consensus 84 ~--~~~--~~~~---------~~~~~~g---~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 135 (558)
+ ++. .+.. ..++... ..+. + .-.|.|.+ +..+.......+.+.. ||.+. .
T Consensus 371 ~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~-~ 448 (585)
T 2ocw_A 371 GAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLK-V 448 (585)
T ss_pred ccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccc-c
Confidence 8 665 2221 1111000 0000 1 11345555 4444333333444433 34443 3
Q ss_pred CCceEeeCCCcEEEEeEee----ccCCCeEEEEECCEEeccCCc-----eEE-EccC---CeEEEccCCCCCCeEEEEEE
Q psy10160 136 LETQVFGVGSDISIPCDVD----GYPIPQVFWYKDGQVIENDGV-----HYR-ITES---NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~----g~P~p~i~W~~~g~~l~~~~~-----~~~-~~~~---~sL~I~~v~~~D~G~Y~C~a 202 (558)
+....+.+|+.+.|.|.+. |.|.|.+.|+|+|..+..... .+. ...+ ++|.|.+++.+|+|.|+|.|
T Consensus 449 ~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 528 (585)
T 2ocw_A 449 PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGV 528 (585)
T ss_pred CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEe
Confidence 6677889999999999997 778899999999987754321 122 2222 48999999999999999999
Q ss_pred EeCCceee-EEEEEEEeccC
Q psy10160 203 SNSYTSDE-NAVTIRVEGIF 221 (558)
Q Consensus 203 ~N~~G~~~-~~~~l~V~~~~ 221 (558)
.|..|... ..+.|.|.+++
T Consensus 529 ~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 529 KQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred EeCCCccEEEEEEEEEEeee
Confidence 99999776 44899998765
No 78
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.79 E-value=1e-18 Score=185.28 Aligned_cols=251 Identities=18% Similarity=0.186 Sum_probs=148.9
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEE----EeCCCCccCCC-Cccc-cCceeEEeccCCC-CCC-cEEEEeC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTL----QALPSEKVADP-NAID-YGTILSSAFPSES-ASP-VVTQTTT 85 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V----~~~p~~~~~~~-~~v~-~~~~~~~~~~~~~-p~p-~v~W~~~ 85 (558)
.|.|.+++.+|+|.|+|.|.|..|... +..+.+ ...|......+ ..+. +..+.+.|.+.+. |.| .++|+++
T Consensus 179 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~ 258 (523)
T 2rcj_C 179 YLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSG 258 (523)
T ss_pred EEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecC
Confidence 699999999999999999999887653 222211 11222221222 2233 4466788998886 878 7999999
Q ss_pred CcccCCCC--ce--eeccc---ccee--------eceeEEeeccceeeEEeeeceeeeCcEE-EecCCceE-eeCCCcEE
Q psy10160 86 TTTEATSP--HV--YAALT---HCVP--------WSNVCLFGARSGYLKETQNGGYLVPVKV-NITLETQV-FGVGSDIS 148 (558)
Q Consensus 86 ~~~~~~~~--~~--~~g~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~-v~~G~~v~ 148 (558)
+..+.... .. ..+.| ..+. -.|.|.+.|..+.........+..+|.+ ...+.... +.+|+.+.
T Consensus 259 g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~dG~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~ 338 (523)
T 2rcj_C 259 ALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPE 338 (523)
T ss_pred CcccceEeCCcEecCCCcEEEEEEEEechhhcCCceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceE
Confidence 86543210 00 00100 0011 3456667766655433333333333443 33444343 78899999
Q ss_pred EEeEeeccCC----CeEEEEECCEEeccCCceE-EEccC------CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 149 IPCDVDGYPI----PQVFWYKDGQVIENDGVHY-RITES------NRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 149 L~C~~~g~P~----p~i~W~~~g~~l~~~~~~~-~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
|.|.+.|.|+ |.|.|+|+|..+....... ....+ +.|.|.++..+|+|.|+|.|.|..+.......+.+
T Consensus 339 l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~ 418 (523)
T 2rcj_C 339 VTCVVVDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISK 418 (523)
T ss_pred EEEEEecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEc
Confidence 9999999754 4899999999886543111 11122 25899999999999999999998877755544443
Q ss_pred e-ccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--cccccchhhhhh
Q psy10160 218 E-GIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGPHIKRAVEAE 277 (558)
Q Consensus 218 ~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~w~~~~l~~~ 277 (558)
. ....+|.+...+... . .+. + +. ....|.+.|.++| .+.|++++....
T Consensus 419 ~~~~~~~P~v~~~~~~~--~-~~~------~--~~-~~l~C~~~g~~p~~~~v~W~k~g~~~~ 469 (523)
T 2rcj_C 419 AKGQPREPQVYTLPPSR--E-EMT------K--NQ-VSLTCLVKGFYPSDIAVEWESNGQPEN 469 (523)
T ss_pred ccCCCCCCEEEEeCCCh--H-Hcc------C--Cc-eEEEEEEEeeECCCCEEEEEECCEECC
Confidence 1 122233322111100 0 000 1 22 4466777687776 889999976543
No 79
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.78 E-value=1e-20 Score=210.40 Aligned_cols=198 Identities=19% Similarity=0.257 Sum_probs=0.0
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccC-ceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYG-TILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
.+|.|.++ +|+|.|+|.|.|..|... +..+.|...|.....+...+.+| .+.+.|...+.|.|.+.|++++..+..
T Consensus 515 ~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~~~p~~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~ 592 (772)
T 3v2a_R 515 STLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADRSTFENLTWYKLGPQPLP 592 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceeeccCCcccccCCceEEEEeccCCCCCCcEEEEcCCcccc
Confidence 57888877 799999999999998764 55666665554443333334444 566899999999999999998754322
Q ss_pred CC---------------------------------------ceeeccccceeeceeEEeeccceeeE--Eeee--ceeee
Q psy10160 92 SP---------------------------------------HVYAALTHCVPWSNVCLFGARSGYLK--ETQN--GGYLV 128 (558)
Q Consensus 92 ~~---------------------------------------~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~ 128 (558)
.. ....|.|.|.+. |..+... .... .....
T Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~-------n~~~~~~~s~~~~l~v~~~~ 665 (772)
T 3v2a_R 593 IHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQ-------DRKTKKRHCVVRQLTVLERV 665 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEE-------eCCCCeEEEEEEeecccccC
Confidence 11 011455555544 4221111 1111 11246
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
+|.+...+....+.+|+.+.|.|.+.|.|.|.|.|+|+|..+..+. ++.+. .+++|.|.++..+|+|.|+|.|.|..|
T Consensus 666 ~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G 744 (772)
T 3v2a_R 666 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDS-GIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLG 744 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCC-CeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCc
Confidence 7778777778889999999999999999999999999999887654 33333 356899999999999999999999999
Q ss_pred eeeEEEEEEEeccC
Q psy10160 208 SDENAVTIRVEGIF 221 (558)
Q Consensus 208 ~~~~~~~l~V~~~~ 221 (558)
..+.++.|.|.+++
T Consensus 745 ~~~~~~~l~V~~~p 758 (772)
T 3v2a_R 745 CAKVEAFFIIEGAQ 758 (772)
T ss_dssp --------------
T ss_pred ceeEEEEEEEECCC
Confidence 99999999998765
No 80
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.78 E-value=7.7e-19 Score=161.46 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=90.5
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
..+|.|.+++.+|+|.|+|.|.|..|... +..|.|..
T Consensus 68 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~------------------------------------------ 105 (203)
T 4fa8_A 68 TFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVK------------------------------------------ 105 (203)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE------------------------------------------
T ss_pred EEEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecC------------------------------------------
Confidence 35799999999999999999999988763 34444432
Q ss_pred CCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec
Q psy10160 92 SPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE 171 (558)
Q Consensus 92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~ 171 (558)
||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.
T Consensus 106 -------------------------------------p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~ 148 (203)
T 4fa8_A 106 -------------------------------------PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEP 148 (203)
T ss_dssp -------------------------------------EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----
T ss_pred -------------------------------------CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeec
Confidence 3334444455667899999999999999999999998776553
Q ss_pred c---CCceEEEccCCeEEE---ccCCCCCCeEEEEEEEeCCceeeEE
Q psy10160 172 N---DGVHYRITESNRLHI---NQANATDSGEYRCVASNSYTSDENA 212 (558)
Q Consensus 172 ~---~~~~~~~~~~~sL~I---~~v~~~D~G~Y~C~a~N~~G~~~~~ 212 (558)
. .+.++.+..+++|.| .+++.+|+|.|+|.|.|..|.....
T Consensus 149 ~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 149 APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp -------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred CcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 2 234667777776544 6899999999999999999998753
No 81
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.78 E-value=4.8e-18 Score=154.51 Aligned_cols=135 Identities=31% Similarity=0.524 Sum_probs=107.3
Q ss_pred CCceEe--cCCeEEEcCCCCCCCEEEEEEEEeCCcceEE--EEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEE
Q psy10160 6 SENYEL--NKNMLTIKRVEPERLGAYTCQAYNGLGRAVS--WTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVT 81 (558)
Q Consensus 6 ~~r~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s--~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~ 81 (558)
+.++.+ ++.+|.|.+++.+|+|.|+|.+.|..|...+ ..+.|..
T Consensus 52 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-------------------------------- 99 (192)
T 2iep_A 52 DTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKM-------------------------------- 99 (192)
T ss_dssp CTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEE--------------------------------
T ss_pred CccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEe--------------------------------
Confidence 445554 4457999999999999999999998877433 3344332
Q ss_pred EEeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeE
Q psy10160 82 QTTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQV 161 (558)
Q Consensus 82 W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i 161 (558)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+
T Consensus 100 -----------------------------------------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v 132 (192)
T 2iep_A 100 -----------------------------------------------KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSV 132 (192)
T ss_dssp -----------------------------------------------EEEEEECCCCEEEETTSCEEECCEEEEESCCEE
T ss_pred -----------------------------------------------CCccccCCcceEEeCCCcEEEEEEEeccCCceE
Confidence 233333445667889999999999999999999
Q ss_pred EEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 162 FWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 162 ~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
.|++++..+.... ++....+++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|..+
T Consensus 133 ~W~~~~~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 133 SWIKGDSALRENS-RIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp EEEETTEECCCCS-SEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEeCCEEccCCC-cEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 9999999887654 6666778899999999999999999999999988 45688888644
No 82
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.77 E-value=4.3e-17 Score=158.11 Aligned_cols=199 Identities=18% Similarity=0.216 Sum_probs=141.1
Q ss_pred cCceeEEeccCCCCCCcEEEEeCCcccCCCCceeec---cccce---------eeceeEEeeccceeeEEeeeceeeeCc
Q psy10160 63 YGTILSSAFPSESASPVVTQTTTTTTEATSPHVYAA---LTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPV 130 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~~g---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~ 130 (558)
+..+.+.|...+.|.|.+.|++++..+....+.... ....+ .-.|.|.+.+..+.......+.+..+|
T Consensus 20 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p 99 (284)
T 2rik_A 20 GESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP 99 (284)
T ss_dssp TCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCC
Confidence 346678999989999999999998877665443211 00111 124567777766665555666666777
Q ss_pred EEEecCC-ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEE---ccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 131 KVNITLE-TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRI---TESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 131 ~~~~~~~-~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~---~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.. .....|.|.+++.+|+|.|+|.+.|..
T Consensus 100 ~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 178 (284)
T 2rik_A 100 RFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESS-KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAA 178 (284)
T ss_dssp EEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred cccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCC-cEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCC
Confidence 7665544 4568899999999999999999999999999887654 3322 223579999999999999999999999
Q ss_pred ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 207 TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
|.....+.|.|..++ .+...+. ...+ .. +......|.+.|.|++.+.|++++....
T Consensus 179 g~~~~~~~l~V~~~p---~~~~~~~---~~~~------~~---g~~v~l~C~~~g~p~~~v~W~~~~~~~~ 234 (284)
T 2rik_A 179 GSASSSTSLKVKEPP---VFRKKPH---PVET------LK---GADVHLECELQGTPPFQVSWHKDKRELR 234 (284)
T ss_dssp CEEEEEEEEEEECCC---BCCSCCC---CEEE------CT---TCCEEEEEECBSSSCCEEEEEETTEEEC
T ss_pred CceeEEEEEEEecCC---cceeCCC---ccee------cC---CCeEEEEEEEEecCCCEEEEEECCEECc
Confidence 999999999997543 3322221 1111 22 3334456667799999999999976544
No 83
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.77 E-value=1.4e-18 Score=180.35 Aligned_cols=259 Identities=16% Similarity=0.172 Sum_probs=149.9
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCcce--E--EEEEEEEe----CCCCccCCC-Ccc-ccCceeEE
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLGRA--V--SWTVTLQA----LPSEKVADP-NAI-DYGTILSS 69 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g~~--~--s~~l~V~~----~p~~~~~~~-~~v-~~~~~~~~ 69 (558)
.+|+.+. +.+|.|.+++.+|+|.|+|.+.|..+.. . ...+.|.. .|......+ ..+ .+..+.+.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 144 (444)
T 1igt_B 65 KGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 144 (444)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEE
Confidence 4577652 3589999999999999999999976542 1 23455542 122222222 223 34466788
Q ss_pred eccCCC-CCC-cEEEEeCCcccCC--CCce-eeccccc---ee--------eceeEEeeccceeeEEeeec---------
Q psy10160 70 AFPSES-ASP-VVTQTTTTTTEAT--SPHV-YAALTHC---VP--------WSNVCLFGARSGYLKETQNG--------- 124 (558)
Q Consensus 70 ~~~~~~-p~p-~v~W~~~~~~~~~--~~~~-~~g~~~~---~~--------~~~~~~~~~~~~~~~~~~~~--------- 124 (558)
|.+.+. |.| .+.|++++..... .... ..+.|.. +. -.+.|.+.+..+........
T Consensus 145 C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~i~~~~~~~~~ 224 (444)
T 1igt_B 145 CLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKP 224 (444)
T ss_dssp EEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTTSCCEEEEEETTTTEEEEEECCCCCCSCCC
T ss_pred EEEcceeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCCCeEEEEEEeCCCCcceEEEeccCCCCccc
Confidence 988775 777 9999998765311 0000 0011111 00 24567666665543222211
Q ss_pred ---------eeeeCcEE-EecCCceE-eeCCCcEEEEeEeeccC----CCeEEEEECCEEeccCCce-EEEc------cC
Q psy10160 125 ---------GYLVPVKV-NITLETQV-FGVGSDISIPCDVDGYP----IPQVFWYKDGQVIENDGVH-YRIT------ES 182 (558)
Q Consensus 125 ---------~~~~p~~~-~~~~~~~~-v~~G~~v~L~C~~~g~P----~p~i~W~~~g~~l~~~~~~-~~~~------~~ 182 (558)
....+|.+ ..++.... +.+|+.+.|.|.+.|.| .+.+.|+|++..+...... .... ..
T Consensus 225 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~ 304 (444)
T 1igt_B 225 CPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVV 304 (444)
T ss_dssp CCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEE
T ss_pred CCccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEE
Confidence 11224554 33333333 58899999999999984 3589999999887543211 1111 12
Q ss_pred CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE-eccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC
Q psy10160 183 NRLHINQANATDSGEYRCVASNSYTSDENAVTIRV-EGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG 261 (558)
Q Consensus 183 ~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g 261 (558)
++|.|.+++.+|+|.|+|.|.|..|.......+.+ .....+|.+...+... .....+. ..+.|.+.|
T Consensus 305 ~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~-----------~~~~~~~-~~L~C~~~g 372 (444)
T 1igt_B 305 SALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPE-----------EEMTKKQ-VTLTCMVTD 372 (444)
T ss_dssp EEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCG-----------GGTTSSE-EEEEEEEEE
T ss_pred EEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCCh-----------HHccCCe-EEEEEEEEe
Confidence 47999999999999999999999987743333322 1122233322111000 0001122 446666667
Q ss_pred C-CCC-cccccchhhhh
Q psy10160 262 Q-LPS-YGPHIKRAVEA 276 (558)
Q Consensus 262 ~-~~~-~~~w~~~~l~~ 276 (558)
. |++ .+.|++++...
T Consensus 373 ~~P~~~~v~W~k~g~~l 389 (444)
T 1igt_B 373 FMPEDIYVEWTNNGKTE 389 (444)
T ss_dssp EBSSCCEEEEEETTEEC
T ss_pred eeCCCCEEEEEECCEEc
Confidence 4 555 78999997654
No 84
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.76 E-value=2e-17 Score=153.30 Aligned_cols=137 Identities=26% Similarity=0.454 Sum_probs=107.0
Q ss_pred CeEEEcCCCC-CCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccC
Q psy10160 14 NMLTIKRVEP-ERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEA 90 (558)
Q Consensus 14 ~~L~I~~v~~-~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~ 90 (558)
.+|.|.+++. +|+|.|+|.+.|..|... +..|.|...+....
T Consensus 64 ~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~----------------------------------- 108 (212)
T 2yd1_A 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPA----------------------------------- 108 (212)
T ss_dssp EEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCT-----------------------------------
T ss_pred EEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCC-----------------------------------
Confidence 4899999999 999999999999998743 44555543321100
Q ss_pred CCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEe
Q psy10160 91 TSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVI 170 (558)
Q Consensus 91 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l 170 (558)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 109 -------------------------------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~ 151 (212)
T 2yd1_A 109 -------------------------------------GFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKV 151 (212)
T ss_dssp -------------------------------------TCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEEC
T ss_pred -------------------------------------CCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEc
Confidence 1244445556677889999999999999999999999999998
Q ss_pred ccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEE-EEEEEeccCCC
Q psy10160 171 ENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENA-VTIRVEGIFIH 223 (558)
Q Consensus 171 ~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~-~~l~V~~~~~~ 223 (558)
.....++.. .+++|.|.+++.+|+|.|+|.|.|..|..... +.|.|.+....
T Consensus 152 ~~~~~~~~~-~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~~ 204 (212)
T 2yd1_A 152 DMSNPRYSL-KDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRVG 204 (212)
T ss_dssp CTTSTTEEE-ETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---C
T ss_pred ccCCCeEEc-cCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecccc
Confidence 875555544 45799999999999999999999999999754 89999866533
No 85
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.76 E-value=1.7e-17 Score=151.08 Aligned_cols=128 Identities=29% Similarity=0.445 Sum_probs=104.0
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
.+|.|.+++.+|+|.|+|.+.|..|... +..+.|...+
T Consensus 63 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~----------------------------------------- 101 (194)
T 2a38_A 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAET----------------------------------------- 101 (194)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----------------------------------------
T ss_pred EEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCC-----------------------------------------
Confidence 4899999999999999999999888653 3444443210
Q ss_pred CceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc
Q psy10160 93 PHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN 172 (558)
Q Consensus 93 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~ 172 (558)
.||.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+..
T Consensus 102 -----------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 146 (194)
T 2a38_A 102 -----------------------------------APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQS 146 (194)
T ss_dssp -----------------------------------EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred -----------------------------------CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCC
Confidence 244445556667788999999999999999999999999999876
Q ss_pred CCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 173 DGVHYRITESN---RLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 173 ~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
.. ++.+..++ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|+
T Consensus 147 ~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 147 SL-DFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp SS-SEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CC-cEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 54 45444433 79999999999999999999999999999988873
No 86
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.76 E-value=1.2e-17 Score=151.49 Aligned_cols=127 Identities=27% Similarity=0.435 Sum_probs=98.1
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATSP 93 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~ 93 (558)
.+|.|.+++.+|+|.|+|.+.|..|...+..+.|.+..
T Consensus 58 ~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~------------------------------------------ 95 (189)
T 2v44_A 58 SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ------------------------------------------ 95 (189)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEC------------------------------------------
T ss_pred EEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEec------------------------------------------
Confidence 48999999999999999999999887654444444321
Q ss_pred ceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc-
Q psy10160 94 HVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN- 172 (558)
Q Consensus 94 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~- 172 (558)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..
T Consensus 96 -----------------------------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~ 140 (189)
T 2v44_A 96 -----------------------------------KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTI 140 (189)
T ss_dssp -----------------------------------CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEEC
T ss_pred -----------------------------------CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEecc
Confidence 12222233445678999999999999999999999999988763
Q ss_pred CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 173 DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 173 ~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
.+.++....+++|.|.+++.+|+|.|+|.|.|..|.......+.|
T Consensus 141 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 141 SDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp CCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred CCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 344777778889999999999999999999999977654444433
No 87
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.75 E-value=2.7e-17 Score=149.46 Aligned_cols=128 Identities=26% Similarity=0.381 Sum_probs=102.1
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
+++|.|.+++.+|+|.|+|.+.|..|...+..+.|.+.
T Consensus 61 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~------------------------------------------ 98 (191)
T 1epf_A 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF------------------------------------------ 98 (191)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE------------------------------------------
T ss_pred ceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEee------------------------------------------
Confidence 46899999999999999999999886544555555442
Q ss_pred CceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc
Q psy10160 93 PHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN 172 (558)
Q Consensus 93 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~ 172 (558)
.+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+..
T Consensus 99 -----------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (191)
T 1epf_A 99 -----------------------------------QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (191)
T ss_dssp -----------------------------------CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGG
T ss_pred -----------------------------------cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeec
Confidence 133334445566788999999999999999999999999998864
Q ss_pred C-CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 173 D-GVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 173 ~-~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
. +.++....+++|.|.+++.+|+|.|+|.|.|..|.......+.|
T Consensus 144 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 144 KKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp GCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred cCCceEEEecCCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 3 34677777889999999999999999999999876655555444
No 88
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.75 E-value=4.7e-17 Score=147.43 Aligned_cols=79 Identities=25% Similarity=0.595 Sum_probs=68.7
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
..+.+|+.+.|.|.+.|.|.|.+.|+++|..+.... ++... .+++|.|.+++.+|+|.|+|.|.|..|....++.|.|
T Consensus 108 ~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 186 (189)
T 2v5t_A 108 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE-KYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV 186 (189)
T ss_dssp EETTSCCCEEEECEEEEESCCEEEEEETTEECCCSS-SEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCC-cEEEecCCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEE
Confidence 456789999999999999999999999999987655 44433 4568999999999999999999999999998888887
Q ss_pred e
Q psy10160 218 E 218 (558)
Q Consensus 218 ~ 218 (558)
.
T Consensus 187 ~ 187 (189)
T 2v5t_A 187 F 187 (189)
T ss_dssp E
T ss_pred E
Confidence 4
No 89
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.75 E-value=7.2e-18 Score=165.52 Aligned_cols=202 Identities=17% Similarity=0.221 Sum_probs=128.9
Q ss_pred cCceeEEeccCCCCCCcEEEEeCCcccCCCCcee----ecc---------cc-ceeeceeEEeeccceeeEEeeeceeee
Q psy10160 63 YGTILSSAFPSESASPVVTQTTTTTTEATSPHVY----AAL---------TH-CVPWSNVCLFGARSGYLKETQNGGYLV 128 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~----~g~---------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (558)
+..+.+.|...+.|.|.+.|++++..+....... .+. .. ...-.|.|.+.+..+.......+.+..
T Consensus 21 G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 100 (304)
T 2yd9_A 21 GGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLR 100 (304)
T ss_dssp TSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEEC
T ss_pred CCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEec
Confidence 3466789999999999999999987664332110 000 00 112234566666555433333333333
Q ss_pred C-------cEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC--ceEEEccCCeEEEccCCCCCCeEEE
Q psy10160 129 P-------VKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG--VHYRITESNRLHINQANATDSGEYR 199 (558)
Q Consensus 129 p-------~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~--~~~~~~~~~sL~I~~v~~~D~G~Y~ 199 (558)
+ |.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... .++....+++|.|.+++.+|+|.|+
T Consensus 101 ~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 180 (304)
T 2yd9_A 101 EDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYE 180 (304)
T ss_dssp GGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEE
T ss_pred cccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEE
Confidence 2 677777888889999999999999999999999999999886542 2455566779999999999999999
Q ss_pred EEEEeCCceeeEE-EEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 200 CVASNSYTSDENA-VTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 200 C~a~N~~G~~~~~-~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
|.|.|..|..... ..+.|.....+|.+...+. ...+..| ......|.+.|.|+|.+.|++++...
T Consensus 181 C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~---------~~~v~~G---~~v~l~C~~~g~p~p~v~W~~~~~~l 246 (304)
T 2yd9_A 181 CVATNSAGVRYSSPANLYVRVQNVAPRFSILPM---------SHEIMPG---GNVNITCVAVGSPMPYVKWMQGAEDL 246 (304)
T ss_dssp EEEEETTEEEECCCEEEEEECCCEEEEEEECCC---------CBCCCTT---CCEEEEEEEEEESCCEEEEEETTEEC
T ss_pred EEEEeCCCCEEeccEEEEEEeeccCCcEEecCC---------ceEEcCC---CeEEEEEEEeeeCCCEEEEEECCEEC
Confidence 9999999987532 4555543222233221111 0112223 33335555668999999999997554
No 90
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.75 E-value=1.2e-17 Score=152.52 Aligned_cols=129 Identities=23% Similarity=0.331 Sum_probs=101.0
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCCC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATSP 93 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~ 93 (558)
+|.|.+++.+|+|.|+|.+.|..|... +..+.|..+|...
T Consensus 63 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~--------------------------------------- 103 (197)
T 2j8h_A 63 QLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIH--------------------------------------- 103 (197)
T ss_dssp EEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEEC---------------------------------------
T ss_pred EEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCC---------------------------------------
Confidence 999999999999999999999988753 4555555432210
Q ss_pred ceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC
Q psy10160 94 HVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND 173 (558)
Q Consensus 94 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~ 173 (558)
.+.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+...
T Consensus 104 -----------------------------------~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~ 148 (197)
T 2j8h_A 104 -----------------------------------LPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN 148 (197)
T ss_dssp -----------------------------------CSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS
T ss_pred -----------------------------------CCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC
Confidence 011111223456788999999999999999999999999988754
Q ss_pred CceEEEc---cCCeEEEcc-CCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 174 GVHYRIT---ESNRLHINQ-ANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 174 ~~~~~~~---~~~sL~I~~-v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
. ++.+. .+++|.|.+ ++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 149 ~-~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 149 G-HYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp S-SCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred C-CEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 4 44443 235899999 99999999999999999999999999885
No 91
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.75 E-value=3.3e-17 Score=170.18 Aligned_cols=258 Identities=15% Similarity=0.122 Sum_probs=148.0
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCC--ccccC-ceeEEeccCCCCCC---cEEEEeCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPN--AIDYG-TILSSAFPSESASP---VVTQTTTT 86 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~--~v~~~-~~~~~~~~~~~p~p---~v~W~~~~ 86 (558)
.+|.|.+++. |+| |+|.+.|..+... +..|.|..+|......+. .+.+| .+.+.|...+.|+| .++|++++
T Consensus 50 ~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g 127 (450)
T 1z7z_I 50 KVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (450)
T ss_dssp EEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETT
T ss_pred eEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCC
Confidence 4899999987 999 9999987655443 567777777766544433 34444 56689999999888 89999998
Q ss_pred cccCCCCce----------------eeccccceeeceeEEeeccceeeEEe--eecee----eeCcEEEecCCceEeeCC
Q psy10160 87 TTEATSPHV----------------YAALTHCVPWSNVCLFGARSGYLKET--QNGGY----LVPVKVNITLETQVFGVG 144 (558)
Q Consensus 87 ~~~~~~~~~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~p~~~~~~~~~~~v~~G 144 (558)
..+...... ..|.|.|.+.+........ ...... ....+ ..+|.+.. ...+.+|
T Consensus 128 ~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G 203 (450)
T 1z7z_I 128 KELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLE-LFENTSAPYQLQTFVLPATPPQLVS---PRVLEVD 203 (450)
T ss_dssp EEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSC-EEEEECCCEECEECCCCSSCCEEEC---CSEEETT
T ss_pred EEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCce-EEeeccCccceeeeccCCCCCEecC---ceeEEeC
Confidence 766433211 1445555544332111000 000000 01111 12233322 1578899
Q ss_pred CcEEEEeEeecc-C--CCeEEEEECCEEeccCCceEEEccCCeEEEc---cCCCCCCe--EEEEEEEeCCceeeEEEEEE
Q psy10160 145 SDISIPCDVDGY-P--IPQVFWYKDGQVIENDGVHYRITESNRLHIN---QANATDSG--EYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 145 ~~v~L~C~~~g~-P--~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~---~v~~~D~G--~Y~C~a~N~~G~~~~~~~l~ 216 (558)
+.+.|.|.+.|. | .|.+.|++++..+.. ++....++ +.+. +++.+|+| .|+|.|.|..|.....+.|.
T Consensus 204 ~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~---~~~~~~~~-~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~ 279 (450)
T 1z7z_I 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGNDS-FSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVT 279 (450)
T ss_dssp SEEEEEEEEESCTTGGGCEEEEEETTEECCC---EEEEETTE-EEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CcEEEEEEeeCCCCCCceEEEEeCCCEeCCc---eEEecCCc-eeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEE
Confidence 999999999999 7 789999999998765 23322322 2222 78999999 99999999999999899999
Q ss_pred EeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcccccchhhhh
Q psy10160 217 VEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSRRSLSVVNK 296 (558)
Q Consensus 217 V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~grth~q~a~~ 296 (558)
|...+. |.+. .....+.. +......|.+. |.|.+.| ++....... .....++..+..
T Consensus 280 V~~~~~-p~i~-----------~~~~~v~~---G~~v~l~C~~~--p~p~i~W--~g~~~~~~~----~~~~L~i~~~~~ 336 (450)
T 1z7z_I 280 IYSFPA-PNVI-----------LTKPEVSE---GTEVTVKCEAH--PRAKVTL--NGVPAQPLG----PRAQLLLKATPE 336 (450)
T ss_dssp EECCCC-CEEE-----------ESCSEEET---TCEEEEEEEC--------------------C----CCCCEEEECCGG
T ss_pred EecCCC-CeEe-----------cCCeeEeC---CCcEEEEEecC--CCCEeEE--CCEEcCCCC----ceEEEEEecCcc
Confidence 976432 2221 11112222 33444566663 8999999 543331111 112344555555
Q ss_pred hhHHHhhc
Q psy10160 297 WSLRQAFT 304 (558)
Q Consensus 297 ~t~g~~~~ 304 (558)
...|.|..
T Consensus 337 ~d~G~Y~C 344 (450)
T 1z7z_I 337 DNGRSFSC 344 (450)
T ss_dssp GTTCEEEE
T ss_pred cCCceEEE
Confidence 55665544
No 92
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.74 E-value=3.5e-18 Score=168.82 Aligned_cols=204 Identities=13% Similarity=0.172 Sum_probs=116.0
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcc----e--EEEEEEEEeCC--C-CccCCCCccccC-ceeEEeccCCCCCCcEE
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGR----A--VSWTVTLQALP--S-EKVADPNAIDYG-TILSSAFPSESASPVVT 81 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~----~--~s~~l~V~~~p--~-~~~~~~~~v~~~-~~~~~~~~~~~p~p~v~ 81 (558)
.+++|.|.+++.+|+|.|+|.|.|..+. . ....+.|...+ + ....+...+..| .+.+.|.. ..+++.+.
T Consensus 72 ~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~v~~G~~v~L~C~~-~~~~~~~~ 150 (316)
T 3vh8_G 72 FQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWS-DIMFEHFF 150 (316)
T ss_dssp BSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSEEETTCCEEEEEEE-SSCCSEEE
T ss_pred ceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCccCCCCeEEEEEcC-CCCCcEEE
Confidence 4679999999999999999999864321 1 13455555432 1 112222234445 55678877 45678899
Q ss_pred EEeCCcccCCCCc--------------------eeeccccceeeceeEEe--eccceeeEEeeeceeeeCcEEEecCCce
Q psy10160 82 QTTTTTTEATSPH--------------------VYAALTHCVPWSNVCLF--GARSGYLKETQNGGYLVPVKVNITLETQ 139 (558)
Q Consensus 82 W~~~~~~~~~~~~--------------------~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 139 (558)
|++++..+..... ...|.|.|.+.+..... ......+...... ...+|.+...+..
T Consensus 151 w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~-~~~~p~i~~~~~~- 228 (316)
T 3vh8_G 151 LHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG-PYEKPSLSAQPGP- 228 (316)
T ss_dssp EEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC-SSCCCEEEEESCS-
T ss_pred EEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC-CCCCCeEEeCCCC-
Confidence 9999876643211 01344444443322110 0001111221111 1134555555543
Q ss_pred EeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc---CCeEEEccCCCCCCeEEEEEEEeCCce-----eeE
Q psy10160 140 VFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE---SNRLHINQANATDSGEYRCVASNSYTS-----DEN 211 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N~~G~-----~~~ 211 (558)
.+.+|+.++|.|.+.+ |.+.+.|+|+|..+........... .++|.|.+++ |+|.|+|.|.|..+. .+.
T Consensus 229 ~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~ 305 (316)
T 3vh8_G 229 KVQAGESVTLSCSSRS-SYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSD 305 (316)
T ss_dssp CCCTTSCCEEEEEESS-CCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCC
T ss_pred eecCCCcEEEEEECCC-CCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCC
Confidence 5789999999999984 7889999999977653221111111 1479999999 999999999997763 356
Q ss_pred EEEEEEeccC
Q psy10160 212 AVTIRVEGIF 221 (558)
Q Consensus 212 ~~~l~V~~~~ 221 (558)
.+.|.|.++|
T Consensus 306 ~~~l~V~g~p 315 (316)
T 3vh8_G 306 PLLVSVTGNP 315 (316)
T ss_dssp CEEC------
T ss_pred cEEEEEeCCC
Confidence 6777776543
No 93
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.74 E-value=3.7e-17 Score=150.72 Aligned_cols=138 Identities=17% Similarity=0.250 Sum_probs=100.5
Q ss_pred CCceEe-cCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEe
Q psy10160 6 SENYEL-NKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTT 84 (558)
Q Consensus 6 ~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~ 84 (558)
.+|+.+ .+++|.|.+++.+|+|.|+|.+.|..+...+..+.|.+....
T Consensus 62 ~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~------------------------------- 110 (208)
T 3r4d_A 62 SGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPV------------------------------- 110 (208)
T ss_dssp CSSEEECTTSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCC-------------------------------
T ss_pred cceeEEecCCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCC-------------------------------
Confidence 345553 457999999999999999999999865444444444332110
Q ss_pred CCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEE
Q psy10160 85 TTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWY 164 (558)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~ 164 (558)
..|.+...... +.+|+.+.|.|.+.+.| |.+.|+
T Consensus 111 -------------------------------------------~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~ 144 (208)
T 3r4d_A 111 -------------------------------------------TQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWL 144 (208)
T ss_dssp -------------------------------------------CCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEE
T ss_pred -------------------------------------------CCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEE
Confidence 01222222223 77899999999999976 899999
Q ss_pred ECCEEeccCCceEEEcc-CCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEEeccC
Q psy10160 165 KDGQVIENDGVHYRITE-SNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRVEGIF 221 (558)
Q Consensus 165 ~~g~~l~~~~~~~~~~~-~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~~ 221 (558)
+++..+..+. ++.+.. +++|.|.+++.+|+|.|+|.|.|..|... ..++|.|..++
T Consensus 145 ~~g~~l~~~~-~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 145 FNSQSLQLTE-RMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDP 202 (208)
T ss_dssp ETTEECCCCS-SEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC---
T ss_pred ECCEeCCCCC-CeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCC
Confidence 9999987654 454444 47899999999999999999999999874 66788886554
No 94
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.74 E-value=8.5e-18 Score=155.47 Aligned_cols=135 Identities=19% Similarity=0.304 Sum_probs=100.1
Q ss_pred CCceEec-------CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCC
Q psy10160 6 SENYELN-------KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESAS 77 (558)
Q Consensus 6 ~~r~~~~-------~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~ 77 (558)
.+|+.+. +.+|.|.+++.+|+|.|+|.+.|..|... +..|.|.+.|....
T Consensus 69 ~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~---------------------- 126 (214)
T 3jz7_A 69 KGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTR---------------------- 126 (214)
T ss_dssp TTTEEESCSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCE----------------------
T ss_pred ccceEEeccCccCCcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCce----------------------
Confidence 4566653 47899999999999999999999887653 45555554432210
Q ss_pred CcEEEEeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEe-ecc
Q psy10160 78 PVVTQTTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDV-DGY 156 (558)
Q Consensus 78 p~v~W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~ 156 (558)
.+....+.+|+.+.|.|.+ .|.
T Consensus 127 ---------------------------------------------------------~~~~~~~~~g~~v~l~C~~~~g~ 149 (214)
T 3jz7_A 127 ---------------------------------------------------------CFVDGSEEIGNDFKLKCEPKEGS 149 (214)
T ss_dssp ---------------------------------------------------------EEEESCCBTTCCEEEEEECSBCC
T ss_pred ---------------------------------------------------------eeeecceecCCcEEEEecCCCCC
Confidence 0011125689999999999 899
Q ss_pred CCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 157 PIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 157 P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
|.|.+.|++++..............+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 150 p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 150 LPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212 (214)
T ss_dssp SSCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCBC
T ss_pred CCCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEeC
Confidence 999999999543222221122223456999999999999999999999999999999999863
No 95
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.73 E-value=3.6e-17 Score=154.53 Aligned_cols=141 Identities=26% Similarity=0.416 Sum_probs=102.5
Q ss_pred ecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 11 LNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
..+++|.|.+++.+|+|.|+|.+.|..|... +..+.|...+..
T Consensus 69 ~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~------------------------------------ 112 (241)
T 3grw_A 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH------------------------------------ 112 (241)
T ss_dssp GGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCC------------------------------------
T ss_pred ccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCC------------------------------------
Confidence 3556899999999999999999999887653 445555432111
Q ss_pred CCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE----
Q psy10160 90 ATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK---- 165 (558)
Q Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~---- 165 (558)
.|..+...+....+.+|+.+.|.|.+.|.|.|.+.|++
T Consensus 113 --------------------------------------~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~ 154 (241)
T 3grw_A 113 --------------------------------------RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEV 154 (241)
T ss_dssp --------------------------------------CCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCS
T ss_pred --------------------------------------CceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccC
Confidence 12222234456677899999999999999999999999
Q ss_pred CCEEeccCCceEEE----------ccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCC
Q psy10160 166 DGQVIENDGVHYRI----------TESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 166 ~g~~l~~~~~~~~~----------~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~ 225 (558)
++..+..++..+.. ..+++|.|.+++.+|+|.|+|.|.|..|....++.|.|.+++.+|.
T Consensus 155 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 155 NGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEE 224 (241)
T ss_dssp SSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--------
T ss_pred CCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCCCCCc
Confidence 88777654432211 1234799999999999999999999999999999999987764443
No 96
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.73 E-value=2.9e-17 Score=171.90 Aligned_cols=259 Identities=14% Similarity=0.116 Sum_probs=142.6
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCcc-----e--EEEEEEEEeC----CCCccCCCCcccc-Ccee
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLGR-----A--VSWTVTLQAL----PSEKVADPNAIDY-GTIL 67 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g~-----~--~s~~l~V~~~----p~~~~~~~~~v~~-~~~~ 67 (558)
.+|+.+. +.+|.|.+++.+|+|.|+|.+.|..|. . ....|.|... |......+..+.. +.+.
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~g~~v~ 145 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSLCSTQPDGNVV 145 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCccccCCCCeEE
Confidence 4566642 248999999999999999999997652 1 2345555531 2222222222333 4667
Q ss_pred EEeccCCC-CC-C-cEEEEeCCcccCCC--Cce---eeccccc------------eeeceeEEeeccceee-EEeeecee
Q psy10160 68 SSAFPSES-AS-P-VVTQTTTTTTEATS--PHV---YAALTHC------------VPWSNVCLFGARSGYL-KETQNGGY 126 (558)
Q Consensus 68 ~~~~~~~~-p~-p-~v~W~~~~~~~~~~--~~~---~~g~~~~------------~~~~~~~~~~~~~~~~-~~~~~~~~ 126 (558)
+.|.+.+. |. | .|.|++++...... ... ..+.|.. ..-.+.|.+.+..+.. .......+
T Consensus 146 L~C~~~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V 225 (475)
T 1iga_A 146 IACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPV 225 (475)
T ss_pred EEEEEeeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEeccc
Confidence 88988886 65 5 89999877432110 000 0011100 0123455555543211 00000000
Q ss_pred ------------------eeCcEE-EecCCceEeeCCCcEEEEeEeeccCC---CeEEEEECCEEeccCC-ceEEE----
Q psy10160 127 ------------------LVPVKV-NITLETQVFGVGSDISIPCDVDGYPI---PQVFWYKDGQVIENDG-VHYRI---- 179 (558)
Q Consensus 127 ------------------~~p~~~-~~~~~~~~v~~G~~v~L~C~~~g~P~---p~i~W~~~g~~l~~~~-~~~~~---- 179 (558)
..+|.+ ...+....+.+|+.+.|.|.+.|.|+ +.|.| ++..+.... .....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g 303 (475)
T 1iga_A 226 PSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCG 303 (475)
T ss_pred ccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCC
Confidence 024444 33333444689999999999999754 68999 443332211 00000
Q ss_pred --ccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEec
Q psy10160 180 --TESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESC 257 (558)
Q Consensus 180 --~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~ 257 (558)
...++|.|.+++.+|+|.|+|.|.|..|.......|.+.....+|.+...+... . .+.. +......|
T Consensus 304 ~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~--~------~v~~---g~~~~L~C 372 (475)
T 1iga_A 304 CYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPS--E------ELAL---NELVTLTC 372 (475)
T ss_pred CEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCCh--H------Hhcc---CCceEEEE
Confidence 123469999999999999999999999986554455432223333332111100 0 0111 33334556
Q ss_pred cCCCCCC--Ccccccchhhhhh
Q psy10160 258 TRAGQLP--SYGPHIKRAVEAE 277 (558)
Q Consensus 258 ~~~g~~~--~~~~w~~~~l~~~ 277 (558)
.+.|.++ +.+.|++++..+.
T Consensus 373 ~~~g~~P~~~~v~W~k~g~~l~ 394 (475)
T 1iga_A 373 LARGFSPKDVLVRWLQGSQELP 394 (475)
T ss_pred EEeeeECCCCEEEEEECCEECC
Confidence 6667644 4899999976543
No 97
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.73 E-value=2.4e-17 Score=134.57 Aligned_cols=92 Identities=25% Similarity=0.316 Sum_probs=81.7
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.|...+.+..+.+|+.+.|.|.+.|.|.|.|.|+|+|..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 90 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEHGLLLTAALPTDAGVYVCRARN 90 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS-SEECCEETTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECccccccee-eEEEeecCceEEEEEecCChhhCEEEEEEEEE
Confidence 57888888999999999999999999999999999999999997654 56554433 799999999999999999999
Q ss_pred CCceeeEEEEEEEecc
Q psy10160 205 SYTSDENAVTIRVEGI 220 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~ 220 (558)
..|..+.++.|.|.++
T Consensus 91 ~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 91 AAGEAYAAAAVTVLEP 106 (107)
T ss_dssp TTEEEEEEEEEEEEC-
T ss_pred CCCEEEEEEEEEEEcC
Confidence 9999999999999754
No 98
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.73 E-value=8.3e-17 Score=147.26 Aligned_cols=135 Identities=21% Similarity=0.334 Sum_probs=104.0
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceEE--EEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAVS--WTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s--~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
.+++|.|.+++.+|+|.|+|.+.|..+.... ..+.+.+.+...
T Consensus 64 ~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 108 (201)
T 3s97_C 64 TNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERT----------------------------------- 108 (201)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSS-----------------------------------
T ss_pred CCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccc-----------------------------------
Confidence 5679999999999999999999997765532 222222211100
Q ss_pred CCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEE
Q psy10160 90 ATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQV 169 (558)
Q Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~ 169 (558)
....+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..
T Consensus 109 -----------------------------------~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~ 153 (201)
T 3s97_C 109 -----------------------------------TKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEP 153 (201)
T ss_dssp -----------------------------------CCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBC
T ss_pred -----------------------------------cCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCc
Confidence 001245555555577789999999999999999999999999987
Q ss_pred eccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 170 IENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 170 l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
+.... + ....+++|.|.+++.+|+|.|+|.|.|..|.....+.|.|+
T Consensus 154 ~~~~~-~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 154 MPSTA-E-ISTSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp CCTTC-E-EETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCce-e-ecCCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 76432 2 23456799999999999999999999999999999999885
No 99
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.73 E-value=5.7e-17 Score=151.90 Aligned_cols=140 Identities=23% Similarity=0.363 Sum_probs=103.9
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEA 90 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~ 90 (558)
.+.+|.|.+++.+|+|.|+|.+.|..|... +..+.|...+..
T Consensus 74 ~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~------------------------------------- 116 (231)
T 3ojm_B 74 QHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRH------------------------------------- 116 (231)
T ss_dssp GGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCC-------------------------------------
T ss_pred CcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCC-------------------------------------
Confidence 456899999999999999999999888653 455555443211
Q ss_pred CCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE----C
Q psy10160 91 TSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK----D 166 (558)
Q Consensus 91 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~----~ 166 (558)
.|......+....+.+|+.+.|.|.+.|+|.|.+.|++ +
T Consensus 117 -------------------------------------~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~ 159 (231)
T 3ojm_B 117 -------------------------------------RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN 159 (231)
T ss_dssp -------------------------------------CCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBT
T ss_pred -------------------------------------CCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCC
Confidence 01111122445667899999999999999999999999 7
Q ss_pred CEEeccCCceEE---------EccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCC
Q psy10160 167 GQVIENDGVHYR---------ITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 167 g~~l~~~~~~~~---------~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~ 225 (558)
|..+..++..+. ...+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|..++.+|.
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 160 GSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPG 227 (231)
T ss_dssp TBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred CccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCCCCCc
Confidence 777654432211 11234799999999999999999999999999999999987765554
No 100
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.73 E-value=6.9e-17 Score=149.64 Aligned_cols=134 Identities=23% Similarity=0.395 Sum_probs=99.8
Q ss_pred CeEEEcCC-CCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 14 NMLTIKRV-EPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 14 ~~L~I~~v-~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
.+|.|.++ +.+|+|.|+|.+.|..|... +..|.|...+...
T Consensus 63 ~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~------------------------------------- 105 (212)
T 2yd6_A 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIP------------------------------------- 105 (212)
T ss_dssp EEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCC-------------------------------------
T ss_pred eEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccC-------------------------------------
Confidence 47999999 59999999999999988753 4455554322110
Q ss_pred CCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec
Q psy10160 92 SPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE 171 (558)
Q Consensus 92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~ 171 (558)
...|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..+.
T Consensus 106 -----------------------------------~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~ 150 (212)
T 2yd6_A 106 -----------------------------------RGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVD 150 (212)
T ss_dssp -----------------------------------TTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC-
T ss_pred -----------------------------------CCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCcccc
Confidence 012344445566778899999999999999999999999999887
Q ss_pred cC--CceEEEcc---CCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEEec
Q psy10160 172 ND--GVHYRITE---SNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRVEG 219 (558)
Q Consensus 172 ~~--~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~ 219 (558)
.. ..++.... .+.|.|.+++.+|+|.|+|.|.|..|... ..+.|.|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 151 TSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp -----CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEe
Confidence 54 22443322 36899999999999999999999999885 556777753
No 101
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.73 E-value=2.7e-17 Score=182.80 Aligned_cols=271 Identities=15% Similarity=0.093 Sum_probs=93.2
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccC----CC--CccccC---ceeEEeccCCCCCCcEEEE
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVA----DP--NAIDYG---TILSSAFPSESASPVVTQT 83 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~----~~--~~v~~~---~~~~~~~~~~~p~p~v~W~ 83 (558)
..+|.|.+++.+|+|.|+|.+.+.. ...+..+.|..+...... .+ ..+.+| .+.+.|...+ |.+.+.|+
T Consensus 85 ~~~l~I~~~~~~d~G~Y~C~~~~~~-~~~~~~v~v~~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~ 162 (772)
T 3v2a_R 85 CKTLTIPKVIGNDTGAYKCFYRETD-LASVIYVYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLC 162 (772)
T ss_dssp ------------------------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEE
T ss_pred EEEEEECCCcHhhCEeEEEEEcCCC-EEEEEEEEECCCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEE
Confidence 4589999999999999999998321 122445555433322221 11 223434 4567777765 88899999
Q ss_pred eC--CcccCCCCc-e----------------eeccccceeeceeEEeeccceeeEEe-eecee--eeCcEEEecCC-ceE
Q psy10160 84 TT--TTTEATSPH-V----------------YAALTHCVPWSNVCLFGARSGYLKET-QNGGY--LVPVKVNITLE-TQV 140 (558)
Q Consensus 84 ~~--~~~~~~~~~-~----------------~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~p~~~~~~~~-~~~ 140 (558)
++ +........ . ..|.|.|.+ .+........ ....+ ..++.+.+.+. ...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~-------~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~~ 235 (772)
T 3v2a_R 163 ARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEA-------KINDESYQSIMYIVVVVGYRIYDVVLSPSHGIE 235 (772)
T ss_dssp EETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEE-------EETTEEEECCEEEEEEECCCEEEEEEECCSCEE
T ss_pred ecCCCccccCCCceeecCCCCCeEecCCChhhCeEEEEEE-------EECCceEEEEEEEEEEecCccceeeeCCCCceE
Confidence 97 443332211 1 134444444 3322211110 00111 12334444444 468
Q ss_pred eeCCCcEEEEeEeecc--CCCeEEEEECCEEeccCCceE----------EEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 141 FGVGSDISIPCDVDGY--PIPQVFWYKDGQVIENDGVHY----------RITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~--P~p~i~W~~~g~~l~~~~~~~----------~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+.+|+.+.|.|.+.+. |.+.+.|++++..+....... .....++|.|.+++.+|+|.|+|.+.|..|.
T Consensus 236 v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 315 (772)
T 3v2a_R 236 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMT 315 (772)
T ss_dssp EETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCE
T ss_pred EecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcc
Confidence 8999999999999984 556799999988754422110 0112347999999999999999999999999
Q ss_pred eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhccc
Q psy10160 209 DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRSR 288 (558)
Q Consensus 209 ~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~gr 288 (558)
.+..+.|.|..++ .....+.......+. .+......|.+.|.|++.+.|++++....... .....+.
T Consensus 316 ~~~~~~l~V~~~p---~~~~~~~~~~~~~v~---------~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~-~~~~~~~ 382 (772)
T 3v2a_R 316 KKNSTFVRVHEKP---FVAFGSGMESLVEAT---------VGERVRIPAKYLGYPPPEIKWYKNGIPLESNH-TIKAGHV 382 (772)
T ss_dssp EEEEEEEEEECCC---C---------------------------------------------------------------
T ss_pred eeEEEEEEEeCCC---eeEeccCCCCcEEEc---------CCCcEEEEEEEeeeCCCeEEEEECCEeCCCCc-eEcccee
Confidence 8889999997543 222111111111111 13344566777789999999999876554322 1112245
Q ss_pred ccchhhhhhhHHHhhcc
Q psy10160 289 RSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 289 th~q~a~~~t~g~~~~~ 305 (558)
.++..+.....|.|...
T Consensus 383 L~i~~v~~~d~G~Y~C~ 399 (772)
T 3v2a_R 383 LTIMEVSERDTGNYTVI 399 (772)
T ss_dssp -----------------
T ss_pred EEEecCChhcCceEEEE
Confidence 56666777777777653
No 102
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.72 E-value=3.2e-16 Score=142.31 Aligned_cols=155 Identities=19% Similarity=0.210 Sum_probs=115.7
Q ss_pred cCceeEEeccCCCCC--CcEEEEeCCcccCCCCceee-------ccccceeeceeEEeeccceeeEEeeeceeeeCcEEE
Q psy10160 63 YGTILSSAFPSESAS--PVVTQTTTTTTEATSPHVYA-------ALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVN 133 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~--p~v~W~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 133 (558)
+..+.+.|...+.|. |.+.|++++..+........ .......-.|.|.+.+. +.......+.+..+|.+.
T Consensus 18 G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~ 96 (190)
T 2wv3_A 18 LLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAAPDIT 96 (190)
T ss_dssp SSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECCCEEE
T ss_pred CceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecCCccc
Confidence 346678898888876 88999999877765533210 00011112345555555 445555566667788888
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEE--CCEEecc--CCceEEEccC---CeEEEccCC-CCCCeEEEEEEEeC
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYK--DGQVIEN--DGVHYRITES---NRLHINQAN-ATDSGEYRCVASNS 205 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--~g~~l~~--~~~~~~~~~~---~sL~I~~v~-~~D~G~Y~C~a~N~ 205 (558)
..+....+.+|+.+.|.|.+.|+|.|.+.|++ ++..+.. ...++.+..+ ++|.|.+++ .+|+|.|+|.|.|.
T Consensus 97 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~ 176 (190)
T 2wv3_A 97 GHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNS 176 (190)
T ss_dssp EECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECS
T ss_pred ccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEec
Confidence 88888889999999999999999999999999 7777642 2345555443 279999999 79999999999999
Q ss_pred CceeeEEEEEEEe
Q psy10160 206 YTSDENAVTIRVE 218 (558)
Q Consensus 206 ~G~~~~~~~l~V~ 218 (558)
.|....++.|.|.
T Consensus 177 ~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 177 IGSASVSTVLRVR 189 (190)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCcceeEEEEEEE
Confidence 9999999998884
No 103
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.72 E-value=1.6e-17 Score=173.04 Aligned_cols=259 Identities=16% Similarity=0.177 Sum_probs=142.5
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCc------------ce-EEEEEEEEe----CCCCccCCC-Ccc
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLG------------RA-VSWTVTLQA----LPSEKVADP-NAI 61 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g------------~~-~s~~l~V~~----~p~~~~~~~-~~v 61 (558)
.+|+.+. ..+|.|.+++.+|+|.|+|.+.|..| .. ....+.|.. .|......+ ..+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 4577642 14899999999999999999999765 11 234555544 222222222 223
Q ss_pred c-cCceeEEeccCCC-CC-CcEEEEeCCcccCCCC--ce--eecccc---cee--------eceeEEeeccceeeEEeee
Q psy10160 62 D-YGTILSSAFPSES-AS-PVVTQTTTTTTEATSP--HV--YAALTH---CVP--------WSNVCLFGARSGYLKETQN 123 (558)
Q Consensus 62 ~-~~~~~~~~~~~~~-p~-p~v~W~~~~~~~~~~~--~~--~~g~~~---~~~--------~~~~~~~~~~~~~~~~~~~ 123 (558)
. ++.+.+.|.+.+. |. |.+.|++++..+.... .. ..+.|. .+. -.|.|.+.+..+.......
T Consensus 145 ~~g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~ 224 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK 224 (457)
T ss_dssp CTTCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGTSCCEEEEEEGGGTEEEEEE
T ss_pred cCCCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCCceEEEEEEeCCCCcceeEE
Confidence 3 3466788988876 64 7899999885432100 00 000000 000 2345666655433222111
Q ss_pred ce-----------------eeeCcEE-EecCCceE-eeCCCcEEEEeEeeccCCC----eEEEEECCEEeccCCc-eEEE
Q psy10160 124 GG-----------------YLVPVKV-NITLETQV-FGVGSDISIPCDVDGYPIP----QVFWYKDGQVIENDGV-HYRI 179 (558)
Q Consensus 124 ~~-----------------~~~p~~~-~~~~~~~~-v~~G~~v~L~C~~~g~P~p----~i~W~~~g~~l~~~~~-~~~~ 179 (558)
.. +..+|.+ ...+.... +.+|+.+.|.|.+.|.|++ .|.|+|++..+..... ....
T Consensus 225 v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~ 304 (457)
T 1hzh_H 225 AEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREE 304 (457)
T ss_dssp CCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEE
T ss_pred ecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccccccccccee
Confidence 11 1124444 33333333 6789999999999998653 8999999988754321 1122
Q ss_pred ccCCeEEEcc---CCCCC---CeEEEEEEEeCCceeeEEEEEEEe-ccCCCCCCCCCCccccceeEEeceeeecccceeE
Q psy10160 180 TESNRLHINQ---ANATD---SGEYRCVASNSYTSDENAVTIRVE-GIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQF 252 (558)
Q Consensus 180 ~~~~sL~I~~---v~~~D---~G~Y~C~a~N~~G~~~~~~~l~V~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 252 (558)
..++++.+.. +...| +|.|+|.|.|..+.......+.+. ....+|.+...+... .....+.
T Consensus 305 ~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~-----------~~~~~~~- 372 (457)
T 1hzh_H 305 QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR-----------DELTKNQ- 372 (457)
T ss_dssp CTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCG-----------GGGGSSE-
T ss_pred cCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCc-----------cccCCCc-
Confidence 3455555553 33555 999999999986655433333220 112222222111000 0001123
Q ss_pred EEEeccCCCCCCC--cccccchhhhh
Q psy10160 253 CCESCTRAGQLPS--YGPHIKRAVEA 276 (558)
Q Consensus 253 ~c~~~~~~g~~~~--~~~w~~~~l~~ 276 (558)
....|.+.|.+++ .+.|++++..+
T Consensus 373 ~~l~C~~~g~~p~~~~v~W~k~g~~l 398 (457)
T 1hzh_H 373 VSLTCLVKGFYPSDIAVEWESNGQPE 398 (457)
T ss_dssp EEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred EEEEEEEEeEECCCCEEEEEECCEEC
Confidence 4566666676554 78999997654
No 104
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=147.59 Aligned_cols=153 Identities=13% Similarity=0.115 Sum_probs=103.8
Q ss_pred cCceeEEeccC-CCCCCcEEEEeCCcccCCCCceeeccc---c--ceee---------ceeEEeeccceeeEEeeec---
Q psy10160 63 YGTILSSAFPS-ESASPVVTQTTTTTTEATSPHVYAALT---H--CVPW---------SNVCLFGARSGYLKETQNG--- 124 (558)
Q Consensus 63 ~~~~~~~~~~~-~~p~p~v~W~~~~~~~~~~~~~~~g~~---~--~~~~---------~~~~~~~~~~~~~~~~~~~--- 124 (558)
++.+.+.|... +.|.|.++|++++..+..+.+...... + .+.+ .|.|.+.|...........
T Consensus 17 g~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~~~~~~~~ 96 (207)
T 3rbs_A 17 KGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGD 96 (207)
T ss_dssp GGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEEEEEECTH
T ss_pred CCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEEEEEEEcc
Confidence 34555656554 579999999999988866544321100 0 1111 3456555532221111000
Q ss_pred ---------ee-------eeCcEEEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECCEEeccCCceEEEcc-CCeEE
Q psy10160 125 ---------GY-------LVPVKVNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDGQVIENDGVHYRITE-SNRLH 186 (558)
Q Consensus 125 ---------~~-------~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~-~~sL~ 186 (558)
.. ..+|.+...+ ...+.+|+.+.|.|.+.|. |.|.+.|+|+|.++..+. ++.... ..+|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~-~~~~~~~~~~L~ 174 (207)
T 3rbs_A 97 VFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE-KHDFKDGICTLL 174 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCCC-CCCCSSEEEEEE
T ss_pred chhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCCC-ceEcCCCEEEEE
Confidence 00 0256665554 4778899999999999999 999999999999997654 333222 23699
Q ss_pred EccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 187 INQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 187 I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
|.+++.+|+|.|+|.|.|..|....++.|.+
T Consensus 175 I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 175 ITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp ETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred ECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 9999999999999999999999999888875
No 105
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.71 E-value=2.4e-17 Score=166.13 Aligned_cols=185 Identities=15% Similarity=0.130 Sum_probs=126.1
Q ss_pred ceEecCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccC-ceeEEeccCC-----CCCCcE
Q psy10160 8 NYELNKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYG-TILSSAFPSE-----SASPVV 80 (558)
Q Consensus 8 r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~-~~~~~~~~~~-----~p~p~v 80 (558)
+....+++|.|.+++.+|+|.|+|.+.|..+... +..+.|..+|... ....+.+| .+.+.|...+ .|.|.+
T Consensus 136 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~--~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i 213 (363)
T 1wio_A 136 KNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS--SIVYKKEGEQVEFSFPLAFTVEKLTGSGEL 213 (363)
T ss_dssp CEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE--EEEEEETBCCEEEECCCCCCCCSSCEEEEE
T ss_pred cccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC--CceEEecCCEEEEEEEEecccccCCCceeE
Confidence 3445678999999999999999999999765442 3455555444322 22234444 5668897777 788999
Q ss_pred EEEeCCcccCCC--------Cceeec-----------c--ccce---------eeceeEEeecc--ceeeEEeeeceeee
Q psy10160 81 TQTTTTTTEATS--------PHVYAA-----------L--THCV---------PWSNVCLFGAR--SGYLKETQNGGYLV 128 (558)
Q Consensus 81 ~W~~~~~~~~~~--------~~~~~g-----------~--~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~ 128 (558)
.|++++..+... .+.... . ...+ .-.|.|.+.|. .+.......+.+.
T Consensus 214 ~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~- 292 (363)
T 1wio_A 214 WWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM- 292 (363)
T ss_dssp EEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE-
T ss_pred EEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE-
Confidence 999998776652 221110 0 0111 22456777777 6654444333222
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCe--EEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQ--VFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~--i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
-..|+.+.|.|.+.|.|.|. +.|+|++..+.. +++|.|.+++.+|+|.|+|.|.|.
T Consensus 293 ------------~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~---------~~~l~i~~v~~~d~G~Y~C~a~~~- 350 (363)
T 1wio_A 293 ------------RATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKV---------SKREKAVWVLNPEAGMWQCLLSDS- 350 (363)
T ss_dssp ------------EECCCSSSEEEEEESSCCTTCCEEEECSSSSCSE---------EESSSEEEESSCCSEEEEEEECSS-
T ss_pred ------------EecCCCeeEEEEEccccCCCccEEEEeCCCceee---------eeeeeeeeeccccceeEEEEEecC-
Confidence 12389999999999999999 999999976643 235788999999999999999964
Q ss_pred ceeeEEEEEEE
Q psy10160 207 TSDENAVTIRV 217 (558)
Q Consensus 207 G~~~~~~~l~V 217 (558)
|....+..+.|
T Consensus 351 ~~~~~~~~~~V 361 (363)
T 1wio_A 351 GQVLLESNIKV 361 (363)
T ss_dssp SSCCEEEEEEE
T ss_pred CeEEEecceEe
Confidence 55556666666
No 106
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.71 E-value=1e-16 Score=146.17 Aligned_cols=123 Identities=20% Similarity=0.330 Sum_probs=98.0
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
+++|.|.+++.+|+|.|+|.+.|..|...+..+.|.+.
T Consensus 67 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~------------------------------------------ 104 (195)
T 2c5d_C 67 VSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE------------------------------------------ 104 (195)
T ss_dssp EEEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC------------------------------------------
T ss_pred ccEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEe------------------------------------------
Confidence 46899999999999999999999877654322333321
Q ss_pred CceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEECCEEec
Q psy10160 93 PHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVIE 171 (558)
Q Consensus 93 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l~ 171 (558)
.+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+.
T Consensus 105 -----------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~ 149 (195)
T 2c5d_C 105 -----------------------------------GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLA 149 (195)
T ss_dssp -----------------------------------CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSS
T ss_pred -----------------------------------cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEecc
Confidence 23344445556778899999999999999999 999999999887
Q ss_pred cCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEE
Q psy10160 172 NDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRV 217 (558)
Q Consensus 172 ~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V 217 (558)
..... ..+++|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 150 ~~~~~---~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 150 TAPGH---GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SSTTS---SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCc---CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 65422 455689999987 89999999999999985 7888888
No 107
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.71 E-value=1e-16 Score=148.03 Aligned_cols=136 Identities=26% Similarity=0.476 Sum_probs=102.9
Q ss_pred CCceEecCCeEEEcCCCCCCCEEEEEEEEeCCcce---EEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEE
Q psy10160 6 SENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRA---VSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQ 82 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~---~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W 82 (558)
..|+.+.+++|.|.+++.+|+|.|+|.+.|..|.. .+..+.|..+|...
T Consensus 57 ~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~---------------------------- 108 (212)
T 1f97_A 57 ADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKP---------------------------- 108 (212)
T ss_dssp TTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCC----------------------------
T ss_pred cCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCc----------------------------
Confidence 56788888999999999999999999999987632 24455554433221
Q ss_pred EeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeE-eeccCCCeE
Q psy10160 83 TTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCD-VDGYPIPQV 161 (558)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~-~~g~P~p~i 161 (558)
..+....+.+|+.+.|.|. +.|.|.|.+
T Consensus 109 ---------------------------------------------------~~~~~~~~~~g~~~~l~C~~~~~~p~~~i 137 (212)
T 1f97_A 109 ---------------------------------------------------TISVPSSVTIGNRAVLTCSEHDGSPPSEY 137 (212)
T ss_dssp ---------------------------------------------------EEECCSEEETTSCEEEEEECSCCBSCCEE
T ss_pred ---------------------------------------------------ccCCccccCCCCeEEEEEEcccCcCCCEE
Confidence 0011235678999999999 799999999
Q ss_pred EEEECCE-EeccCC--------ceEEE-ccCCeEEEccCCCCCCeEEEEEEEeCCcee--eEEEEEEEecc
Q psy10160 162 FWYKDGQ-VIENDG--------VHYRI-TESNRLHINQANATDSGEYRCVASNSYTSD--ENAVTIRVEGI 220 (558)
Q Consensus 162 ~W~~~g~-~l~~~~--------~~~~~-~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~--~~~~~l~V~~~ 220 (558)
.|++++. .+.... .++.. ..+++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|.+.
T Consensus 138 ~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~~ 208 (212)
T 1f97_A 138 SWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVEL 208 (212)
T ss_dssp EEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEESS
T ss_pred EEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEEe
Confidence 9999999 776532 12333 335689999999999999999999999998 56778887643
No 108
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.70 E-value=9.1e-17 Score=152.60 Aligned_cols=81 Identities=23% Similarity=0.406 Sum_probs=61.8
Q ss_pred CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC-----------------------ceEEEccCCeEEEccCCCC
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG-----------------------VHYRITESNRLHINQANAT 193 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~-----------------------~~~~~~~~~sL~I~~v~~~ 193 (558)
....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... .+......++|.|.+++.+
T Consensus 144 ~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~ 223 (250)
T 2fbo_J 144 EVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKIT 223 (250)
T ss_dssp SEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGG
T ss_pred ceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcc
Confidence 34566789999999999999999999999988775421 1122223468999999999
Q ss_pred CCeEEEEEEEeCCc---eeeEEEEEEE
Q psy10160 194 DSGEYRCVASNSYT---SDENAVTIRV 217 (558)
Q Consensus 194 D~G~Y~C~a~N~~G---~~~~~~~l~V 217 (558)
|+|.|+|.|.|..| ....++.|.|
T Consensus 224 D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 224 DAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp GCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred cCEEEEEEecCCccccCccceeEEEeC
Confidence 99999999999555 5555555543
No 109
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.70 E-value=9.7e-17 Score=129.25 Aligned_cols=92 Identities=24% Similarity=0.469 Sum_probs=80.5
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC-ceEEEccC---CeEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG-VHYRITES---NRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.|...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|+|..+.... .++.+... .+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 57888888889999999999999999999999999999999987643 35554433 379999999999999999999
Q ss_pred eCCceeeEEEEEEEec
Q psy10160 204 NSYTSDENAVTIRVEG 219 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~ 219 (558)
|..|..+.++.|.|++
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999999999999964
No 110
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.70 E-value=1.2e-16 Score=148.29 Aligned_cols=85 Identities=18% Similarity=0.268 Sum_probs=64.5
Q ss_pred CceEeeCCCcEEEEeEeeccCC--CeEEEEECCEEeccCCc---eEE-------EccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPI--PQVFWYKDGQVIENDGV---HYR-------ITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~g~~l~~~~~---~~~-------~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
....+.+|+.++|.|.+.|.|. +.+.|++++..+..... +.. ....++|.|.+++.+|+|.|+|.|.|
T Consensus 113 ~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (213)
T 2x1w_L 113 HGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 192 (213)
T ss_dssp SCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEEC
T ss_pred CCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEec
Confidence 3447889999999999999664 47999999876432110 000 01124699999999999999999999
Q ss_pred CCceeeEEEEEEEeccC
Q psy10160 205 SYTSDENAVTIRVEGIF 221 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~ 221 (558)
..|..+..+.|.|.+.+
T Consensus 193 ~~g~~~~~~~l~V~~~p 209 (213)
T 2x1w_L 193 GLMTKKNSTFVRVHEDP 209 (213)
T ss_dssp SSCEEEEEEEEEEEC--
T ss_pred CCCcEEEEEEEEEeccc
Confidence 99999999999997544
No 111
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.70 E-value=1.5e-16 Score=147.79 Aligned_cols=155 Identities=17% Similarity=0.279 Sum_probs=107.8
Q ss_pred CceeEEeccCCCCCCcEEEEeCCcccCCCCc----ee--ec-c---------ccceeeceeEEeeccceeeEE-eeecee
Q psy10160 64 GTILSSAFPSESASPVVTQTTTTTTEATSPH----VY--AA-L---------THCVPWSNVCLFGARSGYLKE-TQNGGY 126 (558)
Q Consensus 64 ~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~----~~--~g-~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 126 (558)
..+.+.|...+.|.|.+.|++++..+..... .. .+ . .....-.|.|.+.+..+.... .....+
T Consensus 25 ~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v 104 (217)
T 2vr9_A 25 EPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQI 104 (217)
T ss_dssp SCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecCCCccccccceEEE
Confidence 4667889888899999999999876654311 10 00 0 001112345555554443211 111222
Q ss_pred e-eCcEEEecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEecc-------CCceEEEccCCeEEEccCCCCCCeE
Q psy10160 127 L-VPVKVNITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIEN-------DGVHYRITESNRLHINQANATDSGE 197 (558)
Q Consensus 127 ~-~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~-------~~~~~~~~~~~sL~I~~v~~~D~G~ 197 (558)
. .++.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.. ...++....+++|.|.+++.+|+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 184 (217)
T 2vr9_A 105 AVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGN 184 (217)
T ss_dssp CEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEE
T ss_pred EEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeE
Confidence 2 35556666777888999999999999 9999999999999998873 2335555667899999999999999
Q ss_pred EEEEEEeCCceeeEEEEEEEe
Q psy10160 198 YRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 198 Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|+|.|.|..|....+..+.|.
T Consensus 185 Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 185 YKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEE
T ss_pred EEEEEEcccceeccccEEEEE
Confidence 999999999998766555543
No 112
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.69 E-value=1.1e-16 Score=147.92 Aligned_cols=151 Identities=17% Similarity=0.249 Sum_probs=108.2
Q ss_pred cCceeEEeccCCCCCCcEEEEeCCcccCCCCc--------------------------eeeccccceeeceeEEeeccce
Q psy10160 63 YGTILSSAFPSESASPVVTQTTTTTTEATSPH--------------------------VYAALTHCVPWSNVCLFGARSG 116 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~~~~ 116 (558)
+..+.+.|...+.|.|.+.|++++..+..... ...|. |.|.+.+..+
T Consensus 24 G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~-------Y~C~~~n~~g 96 (212)
T 2v9r_A 24 GEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV-------YVCVARNYLG 96 (212)
T ss_dssp TCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEE-------EEEEEEETTE
T ss_pred CCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeE-------EEEEEECCCC
Confidence 34666889888889999999999866543221 11233 4455554433
Q ss_pred eeE-Eeeeceee-eCcEEEecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCC
Q psy10160 117 YLK-ETQNGGYL-VPVKVNITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANAT 193 (558)
Q Consensus 117 ~~~-~~~~~~~~-~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~ 193 (558)
... ....+.+. .++.+...+....+.+|+.+.|.|.+ .|.|.|.+.|++++..+.....++.. .+++|.|.+++.+
T Consensus 97 ~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~-~~~~L~i~~~~~~ 175 (212)
T 2v9r_A 97 EAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITI-RGGKLMITYTRKS 175 (212)
T ss_dssp EEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEE-ETTEEEESSCCGG
T ss_pred ceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEc-cCCeEEEeeCCHh
Confidence 221 11111221 34555566677788999999999998 99999999999999999876545543 4679999999999
Q ss_pred CCeEEEEEEEeCCceeeE-EEEEEEeccC
Q psy10160 194 DSGEYRCVASNSYTSDEN-AVTIRVEGIF 221 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~~~-~~~l~V~~~~ 221 (558)
|+|.|+|.|.|..|.... .+.|.|.++|
T Consensus 176 d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 176 DAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred hCeeEEEEEecccCceecceEEEEEEeCc
Confidence 999999999999998754 4889997544
No 113
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.69 E-value=2.2e-16 Score=153.58 Aligned_cols=231 Identities=16% Similarity=0.173 Sum_probs=145.9
Q ss_pred cccC-ceeEEeccCCCC-CCcEEEEe-CCcccCCCC-ceee----ccccce---------eeceeEEeeccce-eeEEee
Q psy10160 61 IDYG-TILSSAFPSESA-SPVVTQTT-TTTTEATSP-HVYA----ALTHCV---------PWSNVCLFGARSG-YLKETQ 122 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p-~p~v~W~~-~~~~~~~~~-~~~~----g~~~~~---------~~~~~~~~~~~~~-~~~~~~ 122 (558)
+..| .+.+.|...+.| .+.+.|++ ++..+.... +... +....+ .-.|.|.+.+..+ ......
T Consensus 14 v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~ 93 (291)
T 1qz1_A 14 ISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATV 93 (291)
T ss_dssp EETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEE
T ss_pred EeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEE
Confidence 4444 566889888876 69999999 665554322 1110 001111 1235666666653 223344
Q ss_pred eceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC-CceEEEccCCeEEEccCCCCCCeEEEEE
Q psy10160 123 NGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND-GVHYRITESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 123 ~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
.+.+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... ..++....+++|.|.+++.+|+|.|+|.
T Consensus 94 ~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 173 (291)
T 1qz1_A 94 NVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCE 173 (291)
T ss_dssp EEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred EEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEccCCcEEEccCccccCeEEEEE
Confidence 455567888888888888999999999999999999999999999887542 3466667778999999999999999999
Q ss_pred EEeCCcee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhh
Q psy10160 202 ASNSYTSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAA 279 (558)
Q Consensus 202 a~N~~G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~ 279 (558)
|.|..+.. ...+.|.|..++ .+...+... ...+.. +......|.+.|.|+|.+.|++++......
T Consensus 174 a~n~~~~~~~~~~~~l~v~~~p---~~~~~~~~~-------~~~~~~---g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~ 240 (291)
T 1qz1_A 174 GRILARGEINFKDIQVIVNVPP---TVQARQSIV-------NATANL---GQSVTLVCDADGFPEPTMSWTKDGEPIENE 240 (291)
T ss_dssp EEEGGGTEEEEEEEEEEEEEEE---EEEESCSEE-------EEETTS---CCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred EEecCCCceeeEEEEEEEecCC---ccccccccc-------cccccc---CceEEEEEEEEEeCCCcEEEEECCEECcCC
Confidence 99986443 355677775433 111110000 011222 333445555668999999999997654332
Q ss_pred hh---hh---hhcccccchhhhhhhHHHhhc
Q psy10160 280 AA---DK---KRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 280 ~~---~~---~~~grth~q~a~~~t~g~~~~ 304 (558)
.. .. ......++..+.....|.|..
T Consensus 241 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 271 (291)
T 1qz1_A 241 EEDDEKHIFSDDSSELTIRNVDKNDEAEYVC 271 (291)
T ss_dssp --CCSSEEECTTSCEEEECSCCGGGCEEEEE
T ss_pred CCCCcceEEcCCCcEEEEEecChhcCEEEEE
Confidence 20 10 111234555555565665544
No 114
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.69 E-value=2.5e-16 Score=141.86 Aligned_cols=118 Identities=19% Similarity=0.367 Sum_probs=94.9
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
++|.|.+++.+|+|.|+|.+.|..|... ...+.|..
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~------------------------------------------ 97 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEG------------------------------------------ 97 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEEC------------------------------------------
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEec------------------------------------------
Confidence 6899999999999999999999877544 33444432
Q ss_pred CCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEECCEEe
Q psy10160 92 SPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVI 170 (558)
Q Consensus 92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l 170 (558)
+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+
T Consensus 98 -------------------------------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~ 140 (182)
T 1rhf_A 98 -------------------------------------VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKI 140 (182)
T ss_dssp -------------------------------------SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEEC
T ss_pred -------------------------------------CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeEC
Confidence 3334445556778899999999999999999 99999999988
Q ss_pred ccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEE
Q psy10160 171 ENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRV 217 (558)
Q Consensus 171 ~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V 217 (558)
.... ..+++|.|.++ +|+|.|+|.|.|..|... ..+.|.|
T Consensus 141 ~~~~-----~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 141 GGPA-----PSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp SCSE-----ESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCC-----CCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 6532 15568999988 599999999999999885 4778777
No 115
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.69 E-value=1.3e-15 Score=149.34 Aligned_cols=209 Identities=15% Similarity=0.148 Sum_probs=139.1
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEeCCcccCCCCc-eee----cccccee---------eceeEEeeccceeeEEeeece
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTTTTTTEATSPH-VYA----ALTHCVP---------WSNVCLFGARSGYLKETQNGG 125 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~-~~~----g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 125 (558)
+..| .+.+.|...+.|.|.+.|++++..+..... ... +....+. -.|.|.+.+..+.......+.
T Consensus 16 v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 95 (305)
T 2nzi_A 16 VRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLE 95 (305)
T ss_dssp ECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEE
Confidence 3444 566889999999999999999877764422 110 1111121 145677777766655555555
Q ss_pred eeeCcEEEec-----CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc---cCCeEEEcc-CCCCCCe
Q psy10160 126 YLVPVKVNIT-----LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT---ESNRLHINQ-ANATDSG 196 (558)
Q Consensus 126 ~~~p~~~~~~-----~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~---~~~sL~I~~-v~~~D~G 196 (558)
+..++.+..+ +....+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+. ...+|.|.+ +..+|+|
T Consensus 96 V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~l~i~~~~~~~d~G 174 (305)
T 2nzi_A 96 VEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNG-HYQVIVTRSFTSLVFPNGVERKDAG 174 (305)
T ss_dssp ECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSS-SCEEEECSSEEEEEETTCCCSTTCE
T ss_pred EecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCC-cEEEEEcCCceEEEEecCCccCccE
Confidence 6566655432 245678899999999999999999999999998886544 44333 235799999 9999999
Q ss_pred EEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEecee-eecccceeEEEEeccCCCCCCCcccccchh
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRY-CQHHYYSQFCCESCTRAGQLPSYGPHIKRA 273 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~ 273 (558)
.|+|.|.|..|.....+.|.|.+++.+|....+.......+.+.+.. ...+..... .|.....+.+...|.+..
T Consensus 175 ~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~---~y~v~~~~~~~~~w~~~~ 249 (305)
T 2nzi_A 175 FYVVCAKNRFGIDQKTVELDVADVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKIT---NYIVEKCATTAERWLRVG 249 (305)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEBCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEE---EEEEEEEETTSCCEEEEE
T ss_pred EEEEEEEeCCCceeeEEEEEEecCCCCCCCceeeeccCCEEEEEEcCCccCCCCcee---EEEEEEecCCCCccEECc
Confidence 99999999999999999999988777666543333333334433321 111221222 233334556667787654
No 116
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.68 E-value=6.7e-16 Score=143.66 Aligned_cols=138 Identities=20% Similarity=0.369 Sum_probs=104.8
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceEE--EEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAVS--WTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s--~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
.+++|.|.+++.+|+|.|+|.+.|..|...+ ..+.|...+........
T Consensus 63 ~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~------------------------------ 112 (218)
T 3k0w_A 63 NTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVD------------------------------ 112 (218)
T ss_dssp CSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCC------------------------------
T ss_pred CCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccc------------------------------
Confidence 3568999999999999999999998886543 45555543321100000
Q ss_pred CCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEE
Q psy10160 90 ATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQV 169 (558)
Q Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~ 169 (558)
.....+|.+...+....+.+|+.+.|.|.+.|+|.|.+.|++++..
T Consensus 113 ----------------------------------~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~ 158 (218)
T 3k0w_A 113 ----------------------------------GVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELP 158 (218)
T ss_dssp ----------------------------------SBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEE
T ss_pred ----------------------------------cccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEE
Confidence 0001245566667778889999999999999999999999999998
Q ss_pred eccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce-eeEEEEEEEecc
Q psy10160 170 IENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTS-DENAVTIRVEGI 220 (558)
Q Consensus 170 l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~~~ 220 (558)
+... ..++|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|.+.
T Consensus 159 ~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 159 LTHE-------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp CTTC-------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred CCCC-------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 8653 2358999999999999999999999988 467788888653
No 117
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.68 E-value=1.4e-16 Score=142.94 Aligned_cols=121 Identities=15% Similarity=0.234 Sum_probs=90.2
Q ss_pred CCceEe-cCCeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEE
Q psy10160 6 SENYEL-NKNMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQT 83 (558)
Q Consensus 6 ~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~ 83 (558)
++|+.+ .+++|.|.+++.+|+|.|+|.+.|..|.. .+..+.|.+....
T Consensus 52 ~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~------------------------------ 101 (176)
T 1hng_A 52 SGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMV------------------------------ 101 (176)
T ss_dssp STTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCC------------------------------
T ss_pred CCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCC------------------------------
Confidence 457765 67789999999999999999999999886 3434444332110
Q ss_pred eCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEE
Q psy10160 84 TTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFW 163 (558)
Q Consensus 84 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W 163 (558)
.+|.+. ..+..+.|.|.+.|.|.|.|.|
T Consensus 102 --------------------------------------------~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W 129 (176)
T 1hng_A 102 --------------------------------------------SKPMIY--------WECSNATLTCEVLEGTDVELKL 129 (176)
T ss_dssp --------------------------------------------CCCEEE--------EETTTTEEEEECSSCSSCEEEE
T ss_pred --------------------------------------------CCCEEE--------ecCCcEEEEEEecCCCCcEEEE
Confidence 001111 1234589999999999999999
Q ss_pred EECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 164 YKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 164 ~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
+|+|..+..+. .+.|.+++.+|+|.|+|.|.|..|.......|.+
T Consensus 130 ~~~g~~l~~~~---------~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 130 YQGKEHLRSLR---------QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EETTEEEEEES---------SSEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EECCEECCCCC---------cEEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 99998876432 2456688899999999999999999988776655
No 118
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.68 E-value=2.6e-15 Score=138.65 Aligned_cols=153 Identities=20% Similarity=0.201 Sum_probs=110.5
Q ss_pred eeEEeccCCC-CCCcEEEEeCCcccCCCCceeeccccc---ee---------eceeEEeeccceeeEEeeeceee-----
Q psy10160 66 ILSSAFPSES-ASPVVTQTTTTTTEATSPHVYAALTHC---VP---------WSNVCLFGARSGYLKETQNGGYL----- 127 (558)
Q Consensus 66 ~~~~~~~~~~-p~p~v~W~~~~~~~~~~~~~~~g~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~----- 127 (558)
+.+.|...+. |.|.+.|++++..+..+.+........ +. -.|.|.+.+..+.........+.
T Consensus 20 ~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~ 99 (212)
T 2r15_A 20 IQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEA 99 (212)
T ss_dssp EEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHH
T ss_pred EEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccch
Confidence 3567777774 689999999998877665543211111 11 13566666655444433222211
Q ss_pred ----------------eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC----CeEEE
Q psy10160 128 ----------------VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES----NRLHI 187 (558)
Q Consensus 128 ----------------~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~----~sL~I 187 (558)
.|+.+...+....+.+|+.+.|.|.+.|+|.|.+.|+|++..+.... ++.+... .+|.|
T Consensus 100 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~~~L~i 178 (212)
T 2r15_A 100 YAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTD-HCNLKFEAGRTAYFTI 178 (212)
T ss_dssp HHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCS-SEEEEEETTTEEEEEE
T ss_pred hhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCC-CEEEEEcCCCEEEEEE
Confidence 34444555667788999999999999999999999999999998654 4444332 28999
Q ss_pred ccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 188 NQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
.+++.+|+|.|+|.|.|..|.....+.|.|..
T Consensus 179 ~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 179 NGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 99999999999999999999999999999863
No 119
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.68 E-value=9.8e-19 Score=180.93 Aligned_cols=259 Identities=14% Similarity=0.142 Sum_probs=145.0
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEe----CCCCccCCC-Ccccc-CceeEEecc
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQA----LPSEKVADP-NAIDY-GTILSSAFP 72 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~----~p~~~~~~~-~~v~~-~~~~~~~~~ 72 (558)
.+|+.+. +.+|.|.+++.+|+|.|+|.+.|..+.. ....+.|.. .|......+ ..+.. ..+.+.|.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 4577753 2489999999999999999999854322 234555542 122222222 22333 466788988
Q ss_pred CCC-CCC-cEEEEeCCcccCCC--Cce-eeccccc---ee--------eceeEEeeccceeeEEeeeceee---------
Q psy10160 73 SES-ASP-VVTQTTTTTTEATS--PHV-YAALTHC---VP--------WSNVCLFGARSGYLKETQNGGYL--------- 127 (558)
Q Consensus 73 ~~~-p~p-~v~W~~~~~~~~~~--~~~-~~g~~~~---~~--------~~~~~~~~~~~~~~~~~~~~~~~--------- 127 (558)
.+. |.| .+.|++++...... ... ..+.|.+ +. -.+.|.+.+..+.........+.
T Consensus 144 ~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dg~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~ 223 (434)
T 1igy_B 144 KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCIC 223 (434)
T ss_dssp EEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTSSCCEEEEECTTTTCCEEEECCCCCCCCCCCCC
T ss_pred eeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCCCcEEEEEEeCCCCccceeeccCCCCCCccccC
Confidence 876 776 89999987642100 000 0011111 00 24566666665432111111110
Q ss_pred ----eCcEEEecCCceE-eeCCCcEEEEeEeeccC----CCeEEEEECCEEeccCCceEE-------EccCCeEEEccCC
Q psy10160 128 ----VPVKVNITLETQV-FGVGSDISIPCDVDGYP----IPQVFWYKDGQVIENDGVHYR-------ITESNRLHINQAN 191 (558)
Q Consensus 128 ----~p~~~~~~~~~~~-v~~G~~v~L~C~~~g~P----~p~i~W~~~g~~l~~~~~~~~-------~~~~~sL~I~~v~ 191 (558)
.|..+..++.... +.+|+.+.|.|.+.|.| .+.|.|+|++..+........ ....++|.|.++.
T Consensus 224 ~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 303 (434)
T 1igy_B 224 TVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQD 303 (434)
T ss_dssp CCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHH
T ss_pred CCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHH
Confidence 1232233333222 78999999999999984 357999999977643211000 0123479999999
Q ss_pred CCCCeEEEEEEEeCCceeeEEEEEEE-eccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--ccc
Q psy10160 192 ATDSGEYRCVASNSYTSDENAVTIRV-EGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGP 268 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~~~~~~~l~V-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~ 268 (558)
.+|+|.|+|.|.|..|.......+.+ .....+|.+...+.... . .. +......|.+.|.+++ .+.
T Consensus 304 ~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~---~------~~---~~~~~L~C~~~g~~P~~~~v~ 371 (434)
T 1igy_B 304 WLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKE---Q------MA---KDKVSLTCMITDFFPEDITVE 371 (434)
T ss_dssp HHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSS---S------SS---SSEEEEEEEEEEEBCSCEEEE
T ss_pred ccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHH---H------hc---CCcEEEEEEEEeeECCCeEEE
Confidence 99999999999999886532222221 01122333221111000 0 01 1124456666575443 799
Q ss_pred ccchhhhh
Q psy10160 269 HIKRAVEA 276 (558)
Q Consensus 269 w~~~~l~~ 276 (558)
|++++..+
T Consensus 372 W~k~g~~l 379 (434)
T 1igy_B 372 WQSDGQAP 379 (434)
T ss_dssp EEETTSCC
T ss_pred EEECCEec
Confidence 99998655
No 120
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.67 E-value=3.5e-16 Score=141.34 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=66.1
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
..+.+|+.+.|.|.+.+.|.|.+.|++++..+ ...+++|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~--------~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSPSVQCRSPRGKN--------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCCEEEEECTTSCE--------EEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc--------ccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 35679999999999999999999999987544 2345789999999999999999999999999999999998
Q ss_pred ccC
Q psy10160 219 GIF 221 (558)
Q Consensus 219 ~~~ 221 (558)
+.+
T Consensus 179 ~~p 181 (184)
T 2ny1_B 179 AFQ 181 (184)
T ss_dssp CCC
T ss_pred ecC
Confidence 765
No 121
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.67 E-value=8.2e-17 Score=160.09 Aligned_cols=198 Identities=16% Similarity=0.141 Sum_probs=93.2
Q ss_pred cccC-ceeEEeccCCC-CCCcEEEEeCCcccCCCCce---------------eeccccceeeceeEEeeccceeeEEeee
Q psy10160 61 IDYG-TILSSAFPSES-ASPVVTQTTTTTTEATSPHV---------------YAALTHCVPWSNVCLFGARSGYLKETQN 123 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~-p~p~v~W~~~~~~~~~~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (558)
+..| .+.+.|...+. |.|.+.|++++..+....+. ..|.|.|.+.+. .. ......+.+...
T Consensus 20 v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~-~~~~~~l~V~~~ 97 (334)
T 1ry7_B 20 FGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QR-VLCHFSVRVTDA 97 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-Ce-EEEEEEEEEecc
Confidence 4444 55688888876 67899999998776554322 256777766654 11 111111111110
Q ss_pred ce----------------eeeCcEEEec----CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCce--EE-Ec
Q psy10160 124 GG----------------YLVPVKVNIT----LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVH--YR-IT 180 (558)
Q Consensus 124 ~~----------------~~~p~~~~~~----~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~--~~-~~ 180 (558)
.. ...+|.+..+ .....+.+|+.+.|.|.+.|.|.|.+.|+|++..+...... +. ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 177 (334)
T 1ry7_B 98 PSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH 177 (334)
T ss_dssp ---------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCT
T ss_pred CccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccceeccc
Confidence 00 0013333321 22356789999999999999999999999999887654311 11 12
Q ss_pred cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCC-CCCCCCCCccccceeEEeceeeecccceeEEEEeccC
Q psy10160 181 ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFI-HPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR 259 (558)
Q Consensus 181 ~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~ 259 (558)
.+.+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+. +|.+.. ..... ..+. . +......|.+
T Consensus 178 ~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~-~~~~~-~~~~------~---G~~v~l~C~~ 246 (334)
T 1ry7_B 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQA-GLPAN-QTAV------L---GSDVEFHCKV 246 (334)
T ss_dssp TTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCT-TCSCC-EEEE------S---SCCEEECCCC
T ss_pred ceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEe-cCCCc-eEEe------C---CCCEEEEEEE
Confidence 345899999999999999999999999999999999975432 222221 11111 1111 1 3445577888
Q ss_pred CCCCCCcccccc
Q psy10160 260 AGQLPSYGPHIK 271 (558)
Q Consensus 260 ~g~~~~~~~w~~ 271 (558)
.|.|+|.+.|++
T Consensus 247 ~g~p~p~v~W~~ 258 (334)
T 1ry7_B 247 YSDAQPHIQWLK 258 (334)
T ss_dssp BCSSCEEEEEEE
T ss_pred ecCCCCeEEEEE
Confidence 899999999999
No 122
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.67 E-value=1.8e-15 Score=137.80 Aligned_cols=158 Identities=14% Similarity=0.207 Sum_probs=115.0
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEeCCcccCCCCceeecccc---ce---------eeceeEEeeccceeeEEeeeceee
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTTTTTTEATSPHVYAALTH---CV---------PWSNVCLFGARSGYLKETQNGGYL 127 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~~g~~~---~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 127 (558)
+..| .+.+.|...+.|.|.+.|++++..+....+....... .+ .-.|.|.+.+..+.........+.
T Consensus 19 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~ 98 (197)
T 3lcy_A 19 TKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQ 98 (197)
T ss_dssp EETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEE
Confidence 3444 5668898888999999999998877655443211111 11 124566666666555555555555
Q ss_pred eCcEEEec---CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCC-CCCeEEEE
Q psy10160 128 VPVKVNIT---LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANA-TDSGEYRC 200 (558)
Q Consensus 128 ~p~~~~~~---~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~-~D~G~Y~C 200 (558)
.+|.+... +....+.+|+.+.|.|.+.|+|.|.+.|++++..+.... ++.+... ++|.|.++.. +|+|.|+|
T Consensus 99 ~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 177 (197)
T 3lcy_A 99 ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE-NITIENTEHYTHLVMKNVQRKTHAGKYKV 177 (197)
T ss_dssp EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS-SEEEEECSSEEEEEESSCCHHHHCEEEEE
T ss_pred cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCC-ceEEEEcCCEEEEEEccccchhhCceEEE
Confidence 55555432 345567899999999999999999999999999987654 4444433 5799999995 89999999
Q ss_pred EEEeCCceeeEEEEEEEec
Q psy10160 201 VASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 201 ~a~N~~G~~~~~~~l~V~~ 219 (558)
.|.|..|.....+.|.|.+
T Consensus 178 ~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 178 QLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEECSSCEEEEEEEEEEEC
T ss_pred EEEcCcCceEEEEEEEEec
Confidence 9999999999999999864
No 123
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.67 E-value=1.2e-15 Score=148.26 Aligned_cols=203 Identities=15% Similarity=0.165 Sum_probs=132.5
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEe-CCcccCCCCceee---ccccce---------eeceeEEeeccceeeE-Eeeece
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTT-TTTTEATSPHVYA---ALTHCV---------PWSNVCLFGARSGYLK-ETQNGG 125 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~-~~~~~~~~~~~~~---g~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~ 125 (558)
+..| .+.+.|...+.|. .+.|++ ++..+....+... +....+ .-.|.|.+.+..+... ....+.
T Consensus 16 v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~ 94 (291)
T 2wim_A 16 LSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 94 (291)
T ss_dssp EETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEE
T ss_pred ecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEE
Confidence 3344 5668888887764 899999 5555544333221 101111 1134666666554332 233444
Q ss_pred eeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc-CCceEEEccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 126 YLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN-DGVHYRITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 126 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
+..++.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.. ...++....+++|.|.+++.+|+|.|+|.+.|
T Consensus 95 v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n 174 (291)
T 2wim_A 95 IYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRV 174 (291)
T ss_dssp EECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred ecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEE
Confidence 55667776677788899999999999999999999999999988764 34467777788999999999999999999999
Q ss_pred CCcee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 205 SYTSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 205 ~~G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
..+.. ...+.+.|..++ .+...+.... .....+......|.+.|.|+|.+.|++++....
T Consensus 175 ~~~~~~~~~~~~~~v~~~p---~~~~~~~~~~----------~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~ 236 (291)
T 2wim_A 175 EARGEIDFRDIIVIVNVPP---AISMPQKSFN----------ATAERGEEMTFSCRASGSPEPAISWFRNGKLIE 236 (291)
T ss_dssp TTTTEEEEEEEEEEEEBCC---CCBCSCSEEE----------CCSSSCCEEEEECBCCCBSCCEEEEEETTEECC
T ss_pred CCCCeeEEeeEEEEeccCC---ccccCccccc----------ceecCCCeEEEEEEeecCCCCeEEEEECCEECc
Confidence 88554 355666665433 2221111000 011124556678888899999999999976543
No 124
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.66 E-value=7.6e-16 Score=139.00 Aligned_cols=147 Identities=23% Similarity=0.330 Sum_probs=106.9
Q ss_pred cCceeEEeccCCCCCC--cEEEEeCCcccCCCCce------------eeccccceeeceeEEeeccceeeEEeeeceeee
Q psy10160 63 YGTILSSAFPSESASP--VVTQTTTTTTEATSPHV------------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLV 128 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p--~v~W~~~~~~~~~~~~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (558)
+..+.+.|...+.|.| .+.|++++..+...... ..|.|.|. +.+... ....+.+..
T Consensus 13 G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~-------~~n~~~---~~~~l~V~~ 82 (184)
T 3b5h_A 13 GSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCV-------FLPEPM---GTANIQLHG 82 (184)
T ss_dssp TTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEE-------EESTTS---CEEEEEECC
T ss_pred CCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEE-------EECCcC---cEEEEEEec
Confidence 3456688888887777 89999998766544321 23444444 443211 122333456
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC-CCeEEEEE---CCEE-eccC-CceEEEccCC---eEEEccCC-CCCCeEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP-IPQVFWYK---DGQV-IEND-GVHYRITESN---RLHINQAN-ATDSGEY 198 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-~p~i~W~~---~g~~-l~~~-~~~~~~~~~~---sL~I~~v~-~~D~G~Y 198 (558)
+|.+...+....+.+|+.+.|.|.+.|+| .|.+.|++ ++.. +... ..++.+..++ +|.|.+++ .+|+|.|
T Consensus 83 ~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y 162 (184)
T 3b5h_A 83 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQY 162 (184)
T ss_dssp SCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEE
T ss_pred CCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceE
Confidence 78787777778899999999999999999 79999999 4544 3322 2456554433 79999999 9999999
Q ss_pred EEEEEeCCceeeEEEEEEEec
Q psy10160 199 RCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~~l~V~~ 219 (558)
+|.|.|..|.....+.|.|.+
T Consensus 163 ~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 163 RCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEEEETTEEEEEEEEEEEC-
T ss_pred EEEEEeCCCcceEEEEEEEec
Confidence 999999999999999999853
No 125
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.66 E-value=7.6e-17 Score=148.50 Aligned_cols=133 Identities=26% Similarity=0.466 Sum_probs=99.6
Q ss_pred CCceEecCCeEEEcCCCCCCCEEEEEEEEeCCcce-E--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEE
Q psy10160 6 SENYELNKNMLTIKRVEPERLGAYTCQAYNGLGRA-V--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQ 82 (558)
Q Consensus 6 ~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W 82 (558)
..|+...+++|.|.+++.+|+|.|+|.+.|..|.. . +..+.|..+|...
T Consensus 60 ~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~---------------------------- 111 (209)
T 1nbq_A 60 EDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKP---------------------------- 111 (209)
T ss_dssp TTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCC----------------------------
T ss_pred cCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCC----------------------------
Confidence 45777777999999999999999999999986632 2 4445554443221
Q ss_pred EeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEe-eccCCCeE
Q psy10160 83 TTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDV-DGYPIPQV 161 (558)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i 161 (558)
..+....+.+|+.+.|.|.+ .|.|.|.+
T Consensus 112 ---------------------------------------------------~~~~~~~~~~g~~~~l~C~~~~~~p~~~v 140 (209)
T 1nbq_A 112 ---------------------------------------------------TVNIPSSATIGNRAVLTCSEQDGSPPSEY 140 (209)
T ss_dssp ---------------------------------------------------CCCCBSEEETTSCEEECCCCCSCBSCCEE
T ss_pred ---------------------------------------------------CcccccceecCCEEEEEEeCCCCCCCcee
Confidence 01112346789999999997 99999999
Q ss_pred EEEECCEEeccCCc--------eEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCcee--eEEEEEEE
Q psy10160 162 FWYKDGQVIENDGV--------HYRIT-ESNRLHINQANATDSGEYRCVASNSYTSD--ENAVTIRV 217 (558)
Q Consensus 162 ~W~~~g~~l~~~~~--------~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~--~~~~~l~V 217 (558)
.|++++..+..... ++.+. .+++|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 141 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V 207 (209)
T 1nbq_A 141 TWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207 (209)
T ss_dssp EEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEE
T ss_pred EEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEE
Confidence 99999988765421 22222 35689999999999999999999999998 44555555
No 126
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.66 E-value=4.6e-16 Score=142.38 Aligned_cols=79 Identities=15% Similarity=0.270 Sum_probs=55.8
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc----CCeEEEccCCCCCCeEEEEEEEeCCce-----e
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE----SNRLHINQANATDSGEYRCVASNSYTS-----D 209 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~----~~sL~I~~v~~~D~G~Y~C~a~N~~G~-----~ 209 (558)
..+.+|+.++|.|.+.|. .|.+.|+|+|..+.....++.... .++|.|.+++.+|+|.|+|.|.|..+. .
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~ 188 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLP 188 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCC
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCc
Confidence 467799999999999998 789999999988754332222222 368999999999999999999998762 1
Q ss_pred eEEEEEEEe
Q psy10160 210 ENAVTIRVE 218 (558)
Q Consensus 210 ~~~~~l~V~ 218 (558)
+..+.|.|.
T Consensus 189 S~~~~l~V~ 197 (198)
T 1ugn_A 189 SDLLELLVL 197 (198)
T ss_dssp CCCEEEEEE
T ss_pred CceEEEEec
Confidence 456666664
No 127
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.66 E-value=9.3e-16 Score=140.73 Aligned_cols=78 Identities=14% Similarity=0.259 Sum_probs=60.3
Q ss_pred eeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 141 FGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
+.+|+.+.|.|.+.|+|.|.+.|++++..+.. ......++ .+.|.+++.+|.|.|+|.|.|..|.....+.|.|
T Consensus 115 ~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~---~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v 191 (202)
T 3bp6_B 115 VPGTGEVQLTCQARGYPLAEVSWQNVSVPANT---SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191 (202)
T ss_dssp CTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE---EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC
T ss_pred cCCCCeEEEEEEccccCCceEEEEeCCCCccC---ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEe
Confidence 35699999999999999999999998765532 22222333 4667799999999999999999999999998888
Q ss_pred eccC
Q psy10160 218 EGIF 221 (558)
Q Consensus 218 ~~~~ 221 (558)
.++.
T Consensus 192 ~~~~ 195 (202)
T 3bp6_B 192 LSRM 195 (202)
T ss_dssp ----
T ss_pred cCcC
Confidence 6543
No 128
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.66 E-value=4.4e-17 Score=163.21 Aligned_cols=182 Identities=16% Similarity=0.237 Sum_probs=121.3
Q ss_pred CCEEEEEEEEeCCcceEEEEEEEEeCCCCccCC-CCccccC-ceeEEeccCCCCCCcEEEEeCCcccCCCCc--------
Q psy10160 25 RLGAYTCQAYNGLGRAVSWTVTLQALPSEKVAD-PNAIDYG-TILSSAFPSESASPVVTQTTTTTTEATSPH-------- 94 (558)
Q Consensus 25 D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~-~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~-------- 94 (558)
|.|.|+|.+.+..... .+.+-.+|.....+ ...+.+| .+.+.|...+.|.|.+.|++++........
T Consensus 136 ~~~~~~C~~~~~l~~l---~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~ 212 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHM---PNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSL 212 (347)
T ss_dssp GGGCCCCSSSSCSSCC---CCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEE
T ss_pred cccCCCCCCChHHhcC---CcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccc
Confidence 6799999988732211 11111122222111 1233444 666899999999999999998865432111
Q ss_pred ---------eeec-cccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEE
Q psy10160 95 ---------VYAA-LTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWY 164 (558)
Q Consensus 95 ---------~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~ 164 (558)
...| .|. |.+.+..+.........+..||.+ ....+.+|+.+.|.|.+.|.|.|.|.|+
T Consensus 213 ~L~i~~v~~~D~G~~Y~-------C~a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~ 281 (347)
T 2ifg_A 213 GLTLANVTSDLNRKNVT-------CWAENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWL 281 (347)
T ss_dssp EEEEESCCSTTTTCCEE-------ECCEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEE
T ss_pred eEEEeeCChHHCCCeEE-------EEEEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEE
Confidence 1134 444 445555444444455555566664 1122457999999999999999999999
Q ss_pred ECCEEeccCCceE-EEc--------cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 165 KDGQVIENDGVHY-RIT--------ESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 165 ~~g~~l~~~~~~~-~~~--------~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
|+|..+....... ... .+++|.|.+++.+|+|.|+|.|.|..|..+.++.|.|.++
T Consensus 282 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 346 (347)
T 2ifg_A 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 346 (347)
T ss_dssp ETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCC
T ss_pred eCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCC
Confidence 9999987543211 111 2457999999999999999999999999999999988654
No 129
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.65 E-value=4.8e-15 Score=150.55 Aligned_cols=162 Identities=17% Similarity=0.198 Sum_probs=121.8
Q ss_pred cCceeEEeccCCCCCCcEEEEeC--CcccCCC-----Cceeec---cccce---------eeceeEEeeccceeeEEeee
Q psy10160 63 YGTILSSAFPSESASPVVTQTTT--TTTEATS-----PHVYAA---LTHCV---------PWSNVCLFGARSGYLKETQN 123 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p~v~W~~~--~~~~~~~-----~~~~~g---~~~~~---------~~~~~~~~~~~~~~~~~~~~ 123 (558)
++.+.+.|...+.|.|.+.|+++ +..+... .+.... ....+ .-.|.|.+.|..+.......
T Consensus 15 G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 94 (389)
T 2jll_A 15 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMY 94 (389)
T ss_dssp TSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEE
Confidence 34666899999999999999999 6554431 222110 01111 22457777777777666667
Q ss_pred ceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC-ceEEEcc---CCeEEEccCCCCCCeEEE
Q psy10160 124 GGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG-VHYRITE---SNRLHINQANATDSGEYR 199 (558)
Q Consensus 124 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~---~~sL~I~~v~~~D~G~Y~ 199 (558)
+.+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... .++.+.. ..+|.|.+++.+|+|.|+
T Consensus 95 l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 174 (389)
T 2jll_A 95 LDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYN 174 (389)
T ss_dssp EEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEE
T ss_pred EEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEE
Confidence 777788888777666678999999999999999999999999999987643 2444332 247999999999999999
Q ss_pred EEEEeCCceeeEEEEEEEeccCCCC
Q psy10160 200 CVASNSYTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 200 C~a~N~~G~~~~~~~l~V~~~~~~p 224 (558)
|.|.|..|.....+.+.|..++.+|
T Consensus 175 C~a~N~~G~~~~~~~l~v~~~P~~P 199 (389)
T 2jll_A 175 CTATNHIGTRFQEYILALADVPSSP 199 (389)
T ss_dssp EEEEETTEEEEEEEEEEECCCCCCC
T ss_pred EEEEcCCCcEEEEEEEEecCCCCCC
Confidence 9999999999988888886665444
No 130
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.65 E-value=4.3e-16 Score=154.74 Aligned_cols=221 Identities=14% Similarity=0.066 Sum_probs=134.3
Q ss_pred CceeEEeccCCC---------CCCcEEEEeCCcccCCCCce--------------eec-cccceeeceeEEeeccceeeE
Q psy10160 64 GTILSSAFPSES---------ASPVVTQTTTTTTEATSPHV--------------YAA-LTHCVPWSNVCLFGARSGYLK 119 (558)
Q Consensus 64 ~~~~~~~~~~~~---------p~p~v~W~~~~~~~~~~~~~--------------~~g-~~~~~~~~~~~~~~~~~~~~~ 119 (558)
..+.+.|...+. |.+.+.|++++..+....+. ..| .|.|. +.+..+...
T Consensus 45 ~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~-------a~n~~g~~~ 117 (329)
T 3oq3_B 45 EPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCT-------VTTKNGDCV 117 (329)
T ss_dssp SCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEE-------EECTTSCEE
T ss_pred CeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEE-------EEeCCCcee
Confidence 355678877764 66889999998765432211 244 45554 444443211
Q ss_pred Eee-eceeeeCcEEEecCCceEeeCCCcEEEEeEeeccC-CCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeE
Q psy10160 120 ETQ-NGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYP-IPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGE 197 (558)
Q Consensus 120 ~~~-~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~ 197 (558)
... ...+..||.+........+.+|+.+.|.|.+.|.| .|.+.|+|++..+...+.++... +++|.|.+++.+|+|.
T Consensus 118 ~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~~~L~I~~v~~~D~G~ 196 (329)
T 3oq3_B 118 QGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-GQNLIIHNPELEDSGR 196 (329)
T ss_dssp EEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-TTEEEECSCCGGGCEE
T ss_pred eEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-CCEEEEeecChhhCEE
Confidence 111 12233344443333334467899999999999999 99999999999997655566654 6899999999999999
Q ss_pred EEEEEEeC--CceeeEE----EEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC---CC-cc
Q psy10160 198 YRCVASNS--YTSDENA----VTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL---PS-YG 267 (558)
Q Consensus 198 Y~C~a~N~--~G~~~~~----~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~---~~-~~ 267 (558)
|+|.|.|. .|..... +.|.|..++..+..... .. . ..+..|....+ .|.+.|.| +| .+
T Consensus 197 Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~~---~~-~-----~~v~~G~~~~l---~C~~~g~p~~~~~i~v 264 (329)
T 3oq3_B 197 YDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLIL---DP-K-----INVTIGEPANI---TCTAVSTSLLVDDVLI 264 (329)
T ss_dssp EEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEEC---CS-E-----EEECTTSCEEE---EEEEEETTCCTTCCEE
T ss_pred EEEEEEecccCCCceeEEEeeEEEEEECCCCCCCceec---CC-e-----eEEecCCCEEE---EEEEEECCCCCCCcEE
Confidence 99999997 6655433 77888654422110001 11 1 12233344444 45555776 67 77
Q ss_pred cccchhhhhhhhhhh---------hhhcccccchhhhhhhHH-Hhhc
Q psy10160 268 PHIKRAVEAEAAAAD---------KKRRSRRSLSVVNKWSLR-QAFT 304 (558)
Q Consensus 268 ~w~~~~l~~~~~~~~---------~~~~grth~q~a~~~t~g-~~~~ 304 (558)
.|++++......... ....+...+..+.....| .|..
T Consensus 265 ~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C 311 (329)
T 3oq3_B 265 DWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTC 311 (329)
T ss_dssp EEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEE
T ss_pred EEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEE
Confidence 999997653221111 012334555566666666 5544
No 131
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=1.1e-15 Score=126.36 Aligned_cols=99 Identities=19% Similarity=0.226 Sum_probs=85.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc---CCeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE---SNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++.+.. +.+|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESE-HMKVENSENGSKLTILAARQEHCGCYTLLVEN 84 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSS-SEEEEECSSEEEEEETTCCTTTCEEEEEEEEC
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCC-CEEEEEcCCEEEEEECCCChhcCEEEEEEEEE
Confidence 57888888889999999999999999999999999999999887654 555443 34799999999999999999999
Q ss_pred CCceeeEEEEEEEeccCCCCCCC
Q psy10160 205 SYTSDENAVTIRVEGIFIHPSCR 227 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~~~p~~~ 227 (558)
..|.....+.|.|.+.+.+|..+
T Consensus 85 ~~g~~~~~~~l~V~~~p~~P~~p 107 (114)
T 2cqv_A 85 KLGSRQAQVNLTVVDKPDPPAGT 107 (114)
T ss_dssp SSCEEECCEEEEEECSCSCCCCC
T ss_pred CCCcEEEEEEEEEECCCCCCCCC
Confidence 99999999999998877666544
No 132
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.65 E-value=3.7e-16 Score=142.76 Aligned_cols=131 Identities=14% Similarity=0.255 Sum_probs=91.5
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcc-eEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGR-AVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEA 90 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~-~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~ 90 (558)
.+++|.|.+++.+|+|.|+|.+.|..|. ..+..+.|.+....
T Consensus 56 ~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~------------------------------------- 98 (196)
T 3p2t_A 56 NKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAY------------------------------------- 98 (196)
T ss_dssp SEEEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSS-------------------------------------
T ss_pred ceEEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCC-------------------------------------
Confidence 4478999999999999999999998873 22333333332100
Q ss_pred CCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEe
Q psy10160 91 TSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVI 170 (558)
Q Consensus 91 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l 170 (558)
.+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|+|+|..+
T Consensus 99 -------------------------------------~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~ 139 (196)
T 3p2t_A 99 -------------------------------------SKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAH 139 (196)
T ss_dssp -------------------------------------CCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCC
T ss_pred -------------------------------------CCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcc
Confidence 12222233332 56899999999999984 5689999999877
Q ss_pred ccCCceEE---EccCCeEEEccCCCCCCeEEEEEEEeCCc-----eeeEEEEEEEe
Q psy10160 171 ENDGVHYR---ITESNRLHINQANATDSGEYRCVASNSYT-----SDENAVTIRVE 218 (558)
Q Consensus 171 ~~~~~~~~---~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G-----~~~~~~~l~V~ 218 (558)
........ ...+++|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|.
T Consensus 140 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 140 PLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp GGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred cceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 54332211 12356899999999999999999999876 23455666663
No 133
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.65 E-value=7.5e-16 Score=124.13 Aligned_cols=93 Identities=24% Similarity=0.420 Sum_probs=84.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.....++.+..+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g 86 (100)
T 2edj_A 7 GPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSG 86 (100)
T ss_dssp SSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECSSC
T ss_pred CCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCC
Confidence 57888888889999999999999999999999999999999888655577777788999999999999999999999999
Q ss_pred eeeEEEEEEEecc
Q psy10160 208 SDENAVTIRVEGI 220 (558)
Q Consensus 208 ~~~~~~~l~V~~~ 220 (558)
.....+.|.|.++
T Consensus 87 ~~~~~~~l~V~~~ 99 (100)
T 2edj_A 87 ETSWSAVLDVTES 99 (100)
T ss_dssp CCBCCEEEEEESC
T ss_pred CEEEEEEEEEecC
Confidence 9999999999654
No 134
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.65 E-value=5.5e-16 Score=145.04 Aligned_cols=129 Identities=18% Similarity=0.179 Sum_probs=88.6
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEATS 92 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~ 92 (558)
+.+|.|.+++.+|+|.|+|.|.|..|.. +..+.+.+.+...
T Consensus 82 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~-~~~v~~~~~~~~~-------------------------------------- 122 (226)
T 4f80_A 82 KAALRIHNVTASDSGKYLCYFQDGDFYE-KALVELKVAALGS-------------------------------------- 122 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEE-EEEEEEEEEBCCC--------------------------------------
T ss_pred eEEEEEeeCchHHCeeEEEEEECCCcEE-EEEEEEeecccee--------------------------------------
Confidence 3589999999999999999999988764 3344444332211
Q ss_pred CceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeec-cCCCeEEEEECCEEe-
Q psy10160 93 PHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDG-YPIPQVFWYKDGQVI- 170 (558)
Q Consensus 93 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g~~l- 170 (558)
..+....+.+|+.+.|.|.+.| .|.|.|.|+|++..+
T Consensus 123 -----------------------------------------~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~ 161 (226)
T 4f80_A 123 -----------------------------------------DLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENI 161 (226)
T ss_dssp -----------------------------------------CCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred -----------------------------------------cccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEc
Confidence 0111233567999999999988 599999999965443
Q ss_pred ccCCceEEEccCCe---EEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 171 ENDGVHYRITESNR---LHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 171 ~~~~~~~~~~~~~s---L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
...........++. +.+.+++.+|+|.|+|.|.|..|..+..+.|.|.+|.
T Consensus 162 ~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~ep~ 215 (226)
T 4f80_A 162 PTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIADPF 215 (226)
T ss_dssp CCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCTTT
T ss_pred CCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECCCC
Confidence 33222233334443 3455688999999999999999999999999986654
No 135
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.64 E-value=9.7e-16 Score=141.01 Aligned_cols=151 Identities=11% Similarity=0.063 Sum_probs=102.6
Q ss_pred ccccC-ceeEEeccCCCCCCc-EEEEeCCcccCCCCc---------eeeccccceeeceeEEeeccceeeEEeeeceeee
Q psy10160 60 AIDYG-TILSSAFPSESASPV-VTQTTTTTTEATSPH---------VYAALTHCVPWSNVCLFGARSGYLKETQNGGYLV 128 (558)
Q Consensus 60 ~v~~~-~~~~~~~~~~~p~p~-v~W~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (558)
.+.+| .+.+.|...+.|.|. +.|++++..+..... ...|.|.|.+.+. .. .....+.+..
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~-------~~--s~~~~l~V~~ 88 (204)
T 3sgj_C 18 RVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQLS-------TL--SDPVQLEVHI 88 (204)
T ss_dssp EEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETTS-------BC--CCCEEEEEEC
T ss_pred EEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCCC-------cc--cccEEEEEec
Confidence 34444 566899999988876 999999877765432 2356677665432 11 1112223334
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeC-C
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNS-Y 206 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~-~ 206 (558)
++.+...+. ..+.+|+.+.|.|.+.+. |.|.+.|+|+|..+... ..+++|.|.+++.+|+|.|+|.|.|. .
T Consensus 89 ~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~------~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 161 (204)
T 3sgj_C 89 GWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF------HHNSDFYIPKATLKDSGSYFCRGLVGSK 161 (204)
T ss_dssp SSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE------EECCCEEESSCCGGGCEEEEEEEEETTE
T ss_pred CceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc------cCCceEEECcCCcccCEEEEEEEEeCCC
Confidence 454444443 678899999999999766 56889999999886431 23568999999999999999999994 4
Q ss_pred ceeeEEEEEEEeccCCCCCC
Q psy10160 207 TSDENAVTIRVEGIFIHPSC 226 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~~p~~ 226 (558)
+..+..+.|.|.+++..|.+
T Consensus 162 ~~~s~~~~l~V~~~~~~P~i 181 (204)
T 3sgj_C 162 NVSSETVQITITQGLAVSTI 181 (204)
T ss_dssp EEECCCEEEEEEC-------
T ss_pred ceecCcEEEEEeCcCCCCcc
Confidence 55578889999877655543
No 136
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.64 E-value=2.3e-16 Score=144.22 Aligned_cols=69 Identities=12% Similarity=0.171 Sum_probs=45.6
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-c---CCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-E---SNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~---~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
..+.+|+.++|.|.+.+.| |.+.|+|+|..+.......... . .++|.|.+++.+|+|.|+|.|.|..+.
T Consensus 109 ~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp --------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred ccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 4577999999999999999 9999999998775322111111 1 258999999999999999999998653
No 137
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.64 E-value=2.2e-15 Score=121.03 Aligned_cols=92 Identities=28% Similarity=0.498 Sum_probs=81.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.....++....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 47888888888899999999999999999999999999999988766566654444 699999999999999999999
Q ss_pred CCceeeEEEEEEEec
Q psy10160 205 SYTSDENAVTIRVEG 219 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~ 219 (558)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999999999999864
No 138
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.64 E-value=9.5e-16 Score=142.63 Aligned_cols=82 Identities=21% Similarity=0.312 Sum_probs=62.8
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc-----eeeEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT-----SDENA 212 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G-----~~~~~ 212 (558)
...+.+|+.++|.|.+.+.|.|.+.|+|+|..+... ......+++|.|.+++.+|+|.|+|.|.|... ..+..
T Consensus 114 ~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~ 191 (218)
T 1uct_A 114 GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ--HQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNA 191 (218)
T ss_dssp CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS--EEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCC
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc--ccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCc
Confidence 346789999999998788888999999999876542 22233467899999999999999999998642 23567
Q ss_pred EEEEEeccC
Q psy10160 213 VTIRVEGIF 221 (558)
Q Consensus 213 ~~l~V~~~~ 221 (558)
+.|.|.+..
T Consensus 192 ~~l~V~g~~ 200 (218)
T 1uct_A 192 LELVVTDSI 200 (218)
T ss_dssp EEEEEC---
T ss_pred EEEEEecCC
Confidence 888887654
No 139
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.64 E-value=4.1e-15 Score=156.90 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=118.7
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCc-----------ce---EEEEEEEEeC----CCCccCCCC--
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLG-----------RA---VSWTVTLQAL----PSEKVADPN-- 59 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g-----------~~---~s~~l~V~~~----p~~~~~~~~-- 59 (558)
.+|+.+. +.+|.|.+++.+|+|.|.|.+.+..+ .. ....|.|... |......+.
T Consensus 66 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~ 145 (512)
T 1zvo_C 66 RGRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCR 145 (512)
T ss_pred CCceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcc
Confidence 4677753 25899999999999999999998642 11 1345555532 211111121
Q ss_pred -ccccCceeEEeccCCC-CCC-cEEEEeCCcccC--CCCce--eeccccc---e--------eeceeEEeeccceeeEEe
Q psy10160 60 -AIDYGTILSSAFPSES-ASP-VVTQTTTTTTEA--TSPHV--YAALTHC---V--------PWSNVCLFGARSGYLKET 121 (558)
Q Consensus 60 -~v~~~~~~~~~~~~~~-p~p-~v~W~~~~~~~~--~~~~~--~~g~~~~---~--------~~~~~~~~~~~~~~~~~~ 121 (558)
.+....+.+.|.+.+. |.| .|+|++++.... ..... ..|.|.- + ...+.|.+.+..+.....
T Consensus 146 ~~~~~~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~g~ytC~v~n~~~~~~~~ 225 (512)
T 1zvo_C 146 HPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKE 225 (512)
T ss_pred cccCCCeEEEEEEEEeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcCCceEEEEEEeCCCCceEE
Confidence 2333566788888886 665 899999654321 00000 0111100 0 123455555544322111
Q ss_pred e-----------eceee----------------------------------------------------eCcEEEe-cCC
Q psy10160 122 Q-----------NGGYL----------------------------------------------------VPVKVNI-TLE 137 (558)
Q Consensus 122 ~-----------~~~~~----------------------------------------------------~p~~~~~-~~~ 137 (558)
. ...+. .+|.+.+ .+.
T Consensus 226 ~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~ 305 (512)
T 1zvo_C 226 IFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPA 305 (512)
T ss_pred EecCCCCCCcCCEEEEeCCCchhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCC
Confidence 1 00111 2233332 333
Q ss_pred ceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCC--ceEEEccC------CeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDG--VHYRITES------NRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~--~~~~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
...+.+|+.+.|.|.+.|.+++ .|.|+|+|..+.... .......+ ++|.|..+..+|.|.|+|.|.|..+
T Consensus 306 ~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~ 385 (512)
T 1zvo_C 306 VQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSL 385 (512)
T ss_pred hHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCC
Confidence 3446689999999999996443 799999998765210 01111122 3599999999999999999999887
Q ss_pred eee
Q psy10160 208 SDE 210 (558)
Q Consensus 208 ~~~ 210 (558)
...
T Consensus 386 ~~~ 388 (512)
T 1zvo_C 386 PPQ 388 (512)
T ss_pred CCC
Confidence 653
No 140
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.63 E-value=1.5e-14 Score=131.21 Aligned_cols=154 Identities=18% Similarity=0.280 Sum_probs=110.4
Q ss_pred CceeEEeccCCCCCCcEEEEeCCcccCCCCceeec-cccce---------eeceeEEeeccceeeEEeeeceeeeCcEEE
Q psy10160 64 GTILSSAFPSESASPVVTQTTTTTTEATSPHVYAA-LTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVN 133 (558)
Q Consensus 64 ~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~~g-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 133 (558)
..+.+.|...+.|.|.+.|++++..+....+.... ....+ .-.|.|.+.+..+.......+.+..+|.+.
T Consensus 20 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~ 99 (192)
T 2va4_A 20 EEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHII 99 (192)
T ss_dssp CCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred CCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCccc
Confidence 45678899988999999999998877665433211 01111 113456666665555544555555666665
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEeccC----CceEEEcc---CCeEEEccCCCCCCeEEEEEEEe
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIEND----GVHYRITE---SNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~~~----~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
..+ ...+.+|+.+.|.|.+.|+|.|.+.|+++ +..+... ..++.+.. .++|.|.+++.+|+|.|+|.|.|
T Consensus 100 ~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 178 (192)
T 2va4_A 100 QLK-NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAAS 178 (192)
T ss_dssp EEC-CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred ccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEe
Confidence 543 45667899999999999999999999998 6555432 22343332 25799999999999999999999
Q ss_pred CCceeeEEEEEEEe
Q psy10160 205 SYTSDENAVTIRVE 218 (558)
Q Consensus 205 ~~G~~~~~~~l~V~ 218 (558)
..|....++.|.|+
T Consensus 179 ~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 179 RIGGHQKSMYLDIE 192 (192)
T ss_dssp SSCEEEEEEEEEEC
T ss_pred cCCceEEEEEEEeC
Confidence 99999999998883
No 141
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.63 E-value=1.2e-15 Score=141.22 Aligned_cols=168 Identities=17% Similarity=0.210 Sum_probs=117.7
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc--cC--CeEEEccCCC-CCCeEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT--ES--NRLHINQANA-TDSGEYRCVA 202 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~--~~--~sL~I~~v~~-~D~G~Y~C~a 202 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.....++.+. .+ .+|.|.+++. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 58888889999999999999999999999999999999999987444455443 23 4799999999 9999999999
Q ss_pred EeCCce-eeEEEEEEEeccCCCCCC-CCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh
Q psy10160 203 SNSYTS-DENAVTIRVEGIFIHPSC-RDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA 280 (558)
Q Consensus 203 ~N~~G~-~~~~~~l~V~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~ 280 (558)
.|..|. .+..+.|.|...+..|.. +......... .+.. +......|.+.|.|++.+.|++++.......
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~------~~~~---g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~ 155 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTR------VIEV---GHTVLMTCKAIGNPTPNIYWIKNQTKVDMSN 155 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCE------EEET---TCCEEECCEEECSSCCEEEEEETTEECCTTS
T ss_pred EeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCce------Eeec---CCeEEEEEEeccCCCCeEEEEECCeEcccCC
Confidence 999998 788899999765432211 1000001111 1122 3334466666789999999999976654322
Q ss_pred -hhhhhcccccchhhhhhhHHHhhc
Q psy10160 281 -ADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 281 -~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
.-....+...+..+.....|.|..
T Consensus 156 ~~~~~~~~~L~i~~v~~~d~G~Y~C 180 (212)
T 2yd1_A 156 PRYSLKDGFLQIENSREEDQGKYEC 180 (212)
T ss_dssp TTEEEETTEEEECSCCGGGCEEEEE
T ss_pred CeEEccCCeEEEccCChhhCEEEEE
Confidence 212223455566666666665544
No 142
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.63 E-value=2.9e-15 Score=143.82 Aligned_cols=131 Identities=16% Similarity=0.276 Sum_probs=96.0
Q ss_pred CceEecC------CeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCc
Q psy10160 7 ENYELNK------NMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPV 79 (558)
Q Consensus 7 ~r~~~~~------~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~ 79 (558)
+|+.+.+ ++|.|.+++.+|+|.|+|.+.|..+.. .+..+.|.+.+.
T Consensus 71 ~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~--------------------------- 123 (268)
T 3mj6_A 71 NRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE--------------------------- 123 (268)
T ss_dssp TTEEECSCTTTTBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC---------------------------
T ss_pred CceEEeecCCCCEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc---------------------------
Confidence 5665533 789999999999999999999976544 344555544311
Q ss_pred EEEEeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEe---ecc
Q psy10160 80 VTQTTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDV---DGY 156 (558)
Q Consensus 80 v~W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~---~g~ 156 (558)
.+....+.+|+.+.|.|.+ .+.
T Consensus 124 -------------------------------------------------------~p~~~~v~~G~~v~L~C~~~~~~~~ 148 (268)
T 3mj6_A 124 -------------------------------------------------------EPRDLRVRVGDTTQMRCSIQSTEEK 148 (268)
T ss_dssp -------------------------------------------------------CCSEEEEETTCCEEECCBCEESSSS
T ss_pred -------------------------------------------------------CCCccccccCCcEEEEEEecCCCCC
Confidence 1224557789999999999 677
Q ss_pred CCCeEEEEECCEEecc-----------------CC----ceEEE-----ccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 157 PIPQVFWYKDGQVIEN-----------------DG----VHYRI-----TESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 157 P~p~i~W~~~g~~l~~-----------------~~----~~~~~-----~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
|.|.+.|++++..... .. .++.+ ..+++|.|.+++.+|+|.|+|.|.|..|...
T Consensus 149 p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~ 228 (268)
T 3mj6_A 149 RVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESR 228 (268)
T ss_dssp CCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEE
Confidence 9999999994321100 00 12222 2356899999999999999999999999999
Q ss_pred EEEEEEEec
Q psy10160 211 NAVTIRVEG 219 (558)
Q Consensus 211 ~~~~l~V~~ 219 (558)
..+.|.|..
T Consensus 229 ~~~~l~V~~ 237 (268)
T 3mj6_A 229 KTIVLHVVQ 237 (268)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 999999853
No 143
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.63 E-value=7.2e-17 Score=166.87 Aligned_cols=198 Identities=16% Similarity=0.172 Sum_probs=119.1
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeC-CCCccC--CCCccccC-ceeEEeccCCCC--CCcEEEEeC--
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQAL-PSEKVA--DPNAIDYG-TILSSAFPSESA--SPVVTQTTT-- 85 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~-p~~~~~--~~~~v~~~-~~~~~~~~~~~p--~p~v~W~~~-- 85 (558)
+.|.|.+++.+|+|.|+|.|.|..+.. ...+.+... +..... ....+..| .+.+.|...+.| .|.+.|+++
T Consensus 181 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~ 259 (438)
T 1qgc_4 181 STLTLTKDEYERHNSYTCEATHKTSTS-PIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTP 259 (438)
T ss_dssp EEEEEEHHHHHTCCEEEEEEEETTCSS-CEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEET
T ss_pred EEEEEeCcccCCCCeEEEEEEecccCC-ceecccccccceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCC
Confidence 479999999999999999999988764 223333321 111111 12234444 566899998888 689999996
Q ss_pred CcccC-----------------CCCceeec-----ccccee---------eceeEEeeccce---------eeEEeeece
Q psy10160 86 TTTEA-----------------TSPHVYAA-----LTHCVP---------WSNVCLFGARSG---------YLKETQNGG 125 (558)
Q Consensus 86 ~~~~~-----------------~~~~~~~g-----~~~~~~---------~~~~~~~~~~~~---------~~~~~~~~~ 125 (558)
+..+. ...++... ....+. -.|.|.+.|..+ .........
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~ 339 (438)
T 1qgc_4 260 EKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAA 339 (438)
T ss_dssp TTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSS
T ss_pred CCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecC
Confidence 32211 01111000 000111 124555554211 111111111
Q ss_pred eeeCcEEEecCCceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC--C-----ceEEEccCCeEEEccCCCCCCe
Q psy10160 126 YLVPVKVNITLETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND--G-----VHYRITESNRLHINQANATDSG 196 (558)
Q Consensus 126 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~--~-----~~~~~~~~~sL~I~~v~~~D~G 196 (558)
...+|.+...+....+.+|+.+.|.|.+.|. |.| .+.|+++|..+... . ..|.. .+.|.|.++..+| |
T Consensus 340 ~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d-g 416 (438)
T 1qgc_4 340 KTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVPSSTWPS-E 416 (438)
T ss_dssp CCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEE--EEEEEEEEEHHHH-S
T ss_pred CCCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCccccCCcEEE--EEEEEEehhhcCC-c
Confidence 1234554444334446789999999999997 888 89999998776421 1 11111 1258999999889 9
Q ss_pred EEEEEEEeCCceeeEEEEE
Q psy10160 197 EYRCVASNSYTSDENAVTI 215 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l 215 (558)
.|+|.|.|..|.......+
T Consensus 417 ~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 417 TVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp CCEEEEEEGGGTEEEEEEC
T ss_pred eEEEEEEeCCCCcceeeec
Confidence 9999999999987655443
No 144
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.63 E-value=3.8e-15 Score=136.52 Aligned_cols=73 Identities=14% Similarity=0.276 Sum_probs=56.6
Q ss_pred CCCcEEEEeEee-ccCCCeEEEEECCEEeccCCceEEEccC-CeE---EEccCCCCCCeEEEEEEEeCCceeeEEEEE
Q psy10160 143 VGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRITES-NRL---HINQANATDSGEYRCVASNSYTSDENAVTI 215 (558)
Q Consensus 143 ~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~sL---~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 215 (558)
.|+.+.|.|.+. |+|.|.|.|+++|..+.....++....+ +.+ .+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 120 ~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 120 TSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp STTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred CCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 488999999995 9999999999999988765444444433 322 234566789999999999999998876654
No 145
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=151.06 Aligned_cols=203 Identities=13% Similarity=0.128 Sum_probs=130.2
Q ss_pred cccC-ceeEEeccC-------CCCCCcEEEEeCCccc--CCC--Cceeeccccce---------eeceeEEeeccceeeE
Q psy10160 61 IDYG-TILSSAFPS-------ESASPVVTQTTTTTTE--ATS--PHVYAALTHCV---------PWSNVCLFGARSGYLK 119 (558)
Q Consensus 61 v~~~-~~~~~~~~~-------~~p~p~v~W~~~~~~~--~~~--~~~~~g~~~~~---------~~~~~~~~~~~~~~~~ 119 (558)
+.+| .+.+.|... +.|.|.+.|++++..+ ... .+.. .....+ .-.|.|.+.+..+...
T Consensus 30 v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~ 108 (339)
T 3o4o_C 30 RLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMW-AQDGALWLLPALQEDSGTYVCTTRNASYCDK 108 (339)
T ss_dssp EETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEE-EETTEEEESSBCTTCCEEEECCEEETTEEEE
T ss_pred EECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEE-eeCCeEEECCCCcccCEEEEEEEECCcceEE
Confidence 3444 566888887 8899999999998763 222 1111 000111 1133455555544444
Q ss_pred EeeeceeeeCcEEE--ecCCceEeeCCCcEEEEeE-----eeccCCCeEEEEECCEEeccCCceEEEccC-CeEEEccCC
Q psy10160 120 ETQNGGYLVPVKVN--ITLETQVFGVGSDISIPCD-----VDGYPIPQVFWYKDGQVIENDGVHYRITES-NRLHINQAN 191 (558)
Q Consensus 120 ~~~~~~~~~p~~~~--~~~~~~~v~~G~~v~L~C~-----~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~sL~I~~v~ 191 (558)
....+.+..++... .......+.+|+.+.|.|. +.|.|.|.+.|+|++..+.....++....+ ++|.|.+++
T Consensus 109 ~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (339)
T 3o4o_C 109 MSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVA 188 (339)
T ss_dssp EEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCC
T ss_pred EEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEEcCCcceEEEcccC
Confidence 44333343332211 1222346789999999999 899999999999999998876556666554 589999999
Q ss_pred CCCCeEEEEEEEeCCc----eeeEEEEEEEeccC--CCCCCCCCCccccceeEEeceeeecccceeEEEEeccC---CCC
Q psy10160 192 ATDSGEYRCVASNSYT----SDENAVTIRVEGIF--IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR---AGQ 262 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G----~~~~~~~l~V~~~~--~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~---~g~ 262 (558)
.+|+|.|+|.|.|..| ..+..+.|.|...+ .+|.+...+ .. . .+.. +......|.+ .|.
T Consensus 189 ~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~--~~-~------~v~~---G~~v~L~C~~~~~~g~ 256 (339)
T 3o4o_C 189 LEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL--KT-I------SASL---GSRLTIPCKVFLGTGT 256 (339)
T ss_dssp GGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCS--CC-C------CCCC---CSCCCCCCCEEESSSC
T ss_pred HhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCC--ce-e------Eecc---CCCEEEEEEEECCCCC
Confidence 9999999999999987 45677888887543 123322221 11 1 1122 2223356666 788
Q ss_pred C-CCcccccchhhhh
Q psy10160 263 L-PSYGPHIKRAVEA 276 (558)
Q Consensus 263 ~-~~~~~w~~~~l~~ 276 (558)
| ++.+.|++++...
T Consensus 257 P~~~~v~W~~~g~~~ 271 (339)
T 3o4o_C 257 PLTTMLWWTANDTHI 271 (339)
T ss_dssp CSSCEEEEESSSSCS
T ss_pred CCCceEEEEECCeec
Confidence 8 8899999987553
No 146
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.62 E-value=5.8e-16 Score=147.65 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=88.8
Q ss_pred CCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCc--ccc-CceeEEeccCCCC-----CCcEEEEeCCcc--c
Q psy10160 21 VEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNA--IDY-GTILSSAFPSESA-----SPVVTQTTTTTT--E 89 (558)
Q Consensus 21 v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~--v~~-~~~~~~~~~~~~p-----~p~v~W~~~~~~--~ 89 (558)
++.+|+|.|+|.|. |... +..+.+.. +......|.. +.. ..+.+.|...+.| .|.+.|+++... .
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~-~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 86 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLR-ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSP 86 (254)
T ss_dssp -------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCC
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheee-ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCc
Confidence 78999999999998 4332 22222222 2233332332 334 4667899988887 489999985321 1
Q ss_pred ----------C--CCCceeec---cccceee---------ceeEEeeccceee-----EEeeeceeeeCcEEEecCCceE
Q psy10160 90 ----------A--TSPHVYAA---LTHCVPW---------SNVCLFGARSGYL-----KETQNGGYLVPVKVNITLETQV 140 (558)
Q Consensus 90 ----------~--~~~~~~~g---~~~~~~~---------~~~~~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~~~ 140 (558)
. ...++... ....+.+ .|.|.+.+..+.. .... .....+|.+...+....
T Consensus 87 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V-~~~~~~P~v~~~~~~~~ 165 (254)
T 2c1o_A 87 KRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLEL-KRADAAPTVSIFPPSSE 165 (254)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEE-CCCCBCCEEEEECCCHH
T ss_pred eEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEE-CCCCCCCeeEeecCChh
Confidence 0 01111100 0001111 2345554442211 1111 11113566665444433
Q ss_pred eeCCCcEEEEeEeecc-CC-CeEEEEECCEEeccC-CceEEE--cc------CCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIEND-GVHYRI--TE------SNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~~-~~~~~~--~~------~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
...|+.+.|.|.+.|. |. +.+.|+|+|..+... ...... .. .+.|.|.++..+|+|.|+|.|.|.....
T Consensus 166 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 166 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred hccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 4468899999999985 44 359999999887654 111111 11 2369999999999999999999987654
No 147
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.62 E-value=1.5e-15 Score=136.03 Aligned_cols=75 Identities=21% Similarity=0.311 Sum_probs=61.7
Q ss_pred eEeeCCCcEEEEeEeeccCCC-eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce-eeEEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTS-DENAVTIR 216 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~ 216 (558)
..+.+|+.+.|.|.+.+.|++ .+.|+|+|..+... ..++.|.|.+++.+|+|.|+|.|.|..|. .+..+.|.
T Consensus 98 ~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~ 171 (175)
T 1fnl_A 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNIT 171 (175)
T ss_dssp SEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE------EECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred ceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC------CCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEE
Confidence 456789999999999988665 89999999887431 24568999999999999999999997664 45677888
Q ss_pred Eec
Q psy10160 217 VEG 219 (558)
Q Consensus 217 V~~ 219 (558)
|.+
T Consensus 172 V~~ 174 (175)
T 1fnl_A 172 ITQ 174 (175)
T ss_dssp EEC
T ss_pred EeC
Confidence 864
No 148
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.62 E-value=8.6e-16 Score=139.39 Aligned_cols=77 Identities=16% Similarity=0.265 Sum_probs=58.2
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc---eeeEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT---SDENAVTI 215 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G---~~~~~~~l 215 (558)
..+.+|+.++|.|.+.+ |.|.+.|+|+|..+... ......+++|.|.+++.+|+|.|+|.|.|... ..+..+.|
T Consensus 108 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l 184 (188)
T 1oll_A 108 PEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHVQ--RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL 184 (188)
T ss_dssp SEEETTCEEEEEEECSS-SCSEEEEEEESSSCEEE--EEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEE
T ss_pred CccccCCEEEEEEEcCC-CCCEEEEEECCcccccc--ccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEE
Confidence 45789999999999877 55789999998766531 11223456899999999999999999999752 23455666
Q ss_pred EEe
Q psy10160 216 RVE 218 (558)
Q Consensus 216 ~V~ 218 (558)
.|.
T Consensus 185 ~V~ 187 (188)
T 1oll_A 185 LVT 187 (188)
T ss_dssp EEE
T ss_pred Eec
Confidence 664
No 149
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.62 E-value=2.1e-15 Score=125.08 Aligned_cols=94 Identities=17% Similarity=0.321 Sum_probs=82.8
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC----eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN----RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~----sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.....++.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 93 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAV 93 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEEEEE
Confidence 57788888889999999999999999999999999999999987654466554432 79999999999999999999
Q ss_pred eCCceeeEEEEEEEeccC
Q psy10160 204 NSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~ 221 (558)
|..|.....+.|.|..++
T Consensus 94 N~~G~~~~~~~l~V~~~p 111 (116)
T 2kkq_A 94 NEAGVTTCNTRLDVTARP 111 (116)
T ss_dssp ETTEEEEEEEEEEEECCS
T ss_pred cCCCeEEEEEEEEEeCCC
Confidence 999999999999998665
No 150
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.62 E-value=3e-15 Score=139.34 Aligned_cols=81 Identities=19% Similarity=0.347 Sum_probs=58.4
Q ss_pred EeeCCCcEEEEeEeeccCCCeEEEEEC-CEEeccCCceEEE--ccCCeEE---EccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 140 VFGVGSDISIPCDVDGYPIPQVFWYKD-GQVIENDGVHYRI--TESNRLH---INQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~P~p~i~W~~~-g~~l~~~~~~~~~--~~~~sL~---I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
.+.+|+.+.|.|.+.|+|.|.+.|+++ +..+.... .... ..++.+. +..+..+|.|.|+|.|.|..|.....+
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~ 205 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKT-TTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTA 205 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEE-EEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCceecCcc-ceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEE
Confidence 356799999999999999999999998 55554321 2211 2223222 224567999999999999999999999
Q ss_pred EEEEeccC
Q psy10160 214 TIRVEGIF 221 (558)
Q Consensus 214 ~l~V~~~~ 221 (558)
.|.|.+.+
T Consensus 206 ~l~v~~~p 213 (222)
T 3sbw_C 206 ELVIPELP 213 (222)
T ss_dssp EEECCCC-
T ss_pred EEEecCCc
Confidence 99986443
No 151
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.62 E-value=1.8e-15 Score=145.17 Aligned_cols=192 Identities=11% Similarity=0.031 Sum_probs=125.5
Q ss_pred CCccccC-ceeEEeccCC-CCCC--cEEEEeCCcccCCCCceeecc-----------ccceeeceeEEeeccceeeEEee
Q psy10160 58 PNAIDYG-TILSSAFPSE-SASP--VVTQTTTTTTEATSPHVYAAL-----------THCVPWSNVCLFGARSGYLKETQ 122 (558)
Q Consensus 58 ~~~v~~~-~~~~~~~~~~-~p~p--~v~W~~~~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~~~ 122 (558)
+..+.+| .+.+.|...+ .|.| .+.|++++..+........+. ...-...+.|.+.+..+......
T Consensus 12 ~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~ 91 (265)
T 2oz4_A 12 PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ 91 (265)
T ss_dssp CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEE
Confidence 4455566 4558888888 7777 999999987765421111000 00011136777777766655555
Q ss_pred eceeee--CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEE
Q psy10160 123 NGGYLV--PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRC 200 (558)
Q Consensus 123 ~~~~~~--p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 200 (558)
.+.+.. +|.+. +....+.+|+.+.|.|.+. |.|.+.| +|..+...+ ..+.|.|..+..+|.|.|+|
T Consensus 92 ~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~------~~~~l~i~~~~~~~~g~Y~C 159 (265)
T 2oz4_A 92 TVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG------PRAQLLLKATPEDNGRSFSC 159 (265)
T ss_dssp EEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS------SEECCEEECCGGGTTEEEEE
T ss_pred EEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC------CcEEEEEccccccCCceEEE
Confidence 555543 33333 4456688999999999998 9999999 777764332 22468899999999999999
Q ss_pred EEEeCC-ceee---EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhh
Q psy10160 201 VASNSY-TSDE---NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV 274 (558)
Q Consensus 201 ~a~N~~-G~~~---~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l 274 (558)
.|.|.. |... ..+.|.|..++.. ..... .....+.. +......|.+.|.|+|.+.|++++.
T Consensus 160 ~a~n~~~g~~~~~s~~~~l~V~~~p~~---~~~~~-p~~~~v~~---------g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 160 SATLEVAGQLIHKNQTRELRVLYGPRL---DERDC-PGNWTWPE---------NSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp EEEEECSSSEEEEEEEEEEEEEEEEEC---CGGGS-CSEEEEET---------TCEECCCCCCEEESCCEEEEEETTT
T ss_pred EEEcCCCCCcccccccEEEEEEeCCcc---ccccC-CCccEEcC---------CCeEEEEeECccCCCCeEEEEECCc
Confidence 998654 7665 7788888765432 11111 11111221 4445577888899999999999976
No 152
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.62 E-value=7.7e-15 Score=140.15 Aligned_cols=211 Identities=12% Similarity=0.104 Sum_probs=134.2
Q ss_pred cccC-ceeEEeccCCCCCC-cEEEEeCCcccCCCCce---------eeccccceeeceeEEeeccceeeEEeeeceeeeC
Q psy10160 61 IDYG-TILSSAFPSESASP-VVTQTTTTTTEATSPHV---------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLVP 129 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p-~v~W~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 129 (558)
+..| .+.+.|...+.|.| .+.|++++..+...... ..|.|.|.+.+ ..... .....+..+
T Consensus 13 v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~-------~~~s~--~~~l~v~~~ 83 (262)
T 3rjd_A 13 VFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGL-------SGRSD--PIQLEIHRG 83 (262)
T ss_dssp EETTCCEEEEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESS-------SCCCC--CEEEEEECS
T ss_pred eeCCCeEEEEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEec-------CCccc--cEEEEEecc
Confidence 4444 56689999888888 99999998877544322 25666666543 22111 111122233
Q ss_pred cEEEecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+ +...+....+.+|+.+.|.|.+ .+.|.|.+.|++++..+... ..++.|.|.+++.+|+|.|+|.+.|..+.
T Consensus 84 ~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~ 156 (262)
T 3rjd_A 84 W-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF------HWNSNLTILKTNISHNGTYHCSGMGKHRY 156 (262)
T ss_dssp S-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE------EECCCEEESSCCGGGCEEEEEEEESSSEE
T ss_pred c-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc------CCCCeEEEEECChhhCEEEEEEEeCCCCc
Confidence 3 3344556678899999999999 78888999999999887532 23568999999999999999999999988
Q ss_pred eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC-Cc----ccccchhhhhhhhhhhh
Q psy10160 209 DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP-SY----GPHIKRAVEAEAAAADK 283 (558)
Q Consensus 209 ~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~-~~----~~w~~~~l~~~~~~~~~ 283 (558)
.+..+.|.|.+++.+|.+...+ . .. +.. +......|.+.+.|+ |. +.|++++......
T Consensus 157 ~~~~~~l~V~~~~~~p~~~~~~---~-~~------~~~---g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~---- 219 (262)
T 3rjd_A 157 TSAGISVTVKELFPAPVLNASV---T-SP------LLE---GNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR---- 219 (262)
T ss_dssp EEECEEEEEECSSCCCEEEESS---C-SS------EET---TCCEEEEEECCCCCC-----EEEEEEETTEEEEEE----
T ss_pred cccceEEEeccCCCCCeEeecC---c-ee------ecC---CCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc----
Confidence 8888999997654333332221 1 11 122 333445666767775 55 4666665433211
Q ss_pred hhcccccchhhhhhhHHHhhc
Q psy10160 284 KRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 284 ~~~grth~q~a~~~t~g~~~~ 304 (558)
...+..++..+.....|.|..
T Consensus 220 ~~~~~L~i~~v~~~d~G~Y~C 240 (262)
T 3rjd_A 220 NTSSEYQILTARREDSGLYWC 240 (262)
T ss_dssp ESCCEEEESSCCGGGCEEEEE
T ss_pred CCCceEEEEEechhhCeEEEE
Confidence 112234455555565665544
No 153
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=6.4e-15 Score=118.30 Aligned_cols=92 Identities=26% Similarity=0.335 Sum_probs=79.0
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEE---ccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRI---TESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~---~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+......... ....+|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 4778888888999999999999999999999999999999998765533222 1223799999999999999999999
Q ss_pred CCceeeEEEEEEEec
Q psy10160 205 SYTSDENAVTIRVEG 219 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~ 219 (558)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999999999864
No 154
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.61 E-value=1.2e-15 Score=142.13 Aligned_cols=82 Identities=20% Similarity=0.417 Sum_probs=61.4
Q ss_pred EeeCCCcEEEEeEe-eccCCCeEEEEE-CCEEeccCCce-EEEccCC---eEEEccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 140 VFGVGSDISIPCDV-DGYPIPQVFWYK-DGQVIENDGVH-YRITESN---RLHINQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 140 ~v~~G~~v~L~C~~-~g~P~p~i~W~~-~g~~l~~~~~~-~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
.+.+|+.+.|.|.+ .|.|.|.+.|++ ++..+...... .....++ .|.|.+++.+|+|.|+|.|.|..|.....+
T Consensus 121 ~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~ 200 (222)
T 4i0k_A 121 DLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHG 200 (222)
T ss_dssp ---CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred eecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEE
Confidence 56789999999999 899999999999 45444332111 1112233 388999999999999999999999999999
Q ss_pred EEEEeccC
Q psy10160 214 TIRVEGIF 221 (558)
Q Consensus 214 ~l~V~~~~ 221 (558)
.|.|.+++
T Consensus 201 ~l~V~~~p 208 (222)
T 4i0k_A 201 SVTITGQP 208 (222)
T ss_dssp EEECCC--
T ss_pred EEEEeCCc
Confidence 99997655
No 155
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=5.2e-15 Score=120.71 Aligned_cols=93 Identities=25% Similarity=0.297 Sum_probs=82.3
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS-SEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCC-cEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 358888888889999999999999999999999999999999887654 66665555 89999999999999999999
Q ss_pred eCCceeeEEEEEEEecc
Q psy10160 204 NSYTSDENAVTIRVEGI 220 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~ 220 (558)
|..|.....+.|.|.++
T Consensus 90 n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp ETTEEEEEEEEEEEEC-
T ss_pred cCCCcEEEEEEEEEEcC
Confidence 99999999999999754
No 156
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.61 E-value=2.1e-15 Score=119.76 Aligned_cols=88 Identities=18% Similarity=0.259 Sum_probs=74.7
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EEeccCCceEEE-ccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QVIENDGVHYRI-TESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~l~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++ ..+.... .+.. ...++|.|.+++.+|+|.|+|.|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~ 80 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPEL-LVDAKSSTTSIFFPSAKRADSGNYKLKVKNE 80 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTS-EEEEETTEEEEECTTBCGGGCEEEEEEEEET
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcE-EEEecCCEEEEEECCCChhcCEEEEEEEEcC
Confidence 567777778888999999999999999999999999999 8776542 2222 22357999999999999999999999
Q ss_pred CceeeEEEEEEE
Q psy10160 206 YTSDENAVTIRV 217 (558)
Q Consensus 206 ~G~~~~~~~l~V 217 (558)
.|..+..+.|.|
T Consensus 81 ~G~~~~~~~l~V 92 (93)
T 1wit_A 81 LGEDEAIFEVIV 92 (93)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCeEEEEEEEEE
Confidence 999999988887
No 157
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.61 E-value=2.2e-16 Score=155.49 Aligned_cols=231 Identities=11% Similarity=0.041 Sum_probs=138.9
Q ss_pred ccC-ceeEEeccCCC-CCCcEEEEeCCcccCCCCceeec-cccce---------eeceeEEeeccceeeEEeeeceeeeC
Q psy10160 62 DYG-TILSSAFPSES-ASPVVTQTTTTTTEATSPHVYAA-LTHCV---------PWSNVCLFGARSGYLKETQNGGYLVP 129 (558)
Q Consensus 62 ~~~-~~~~~~~~~~~-p~p~v~W~~~~~~~~~~~~~~~g-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p 129 (558)
.+| .+.+.|...+. |.|.+.|++++..+....+.... ....+ .-.|.|.+.+..+.........+..+
T Consensus 19 ~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~ 98 (317)
T 2y25_A 19 TGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAF 98 (317)
T ss_dssp ETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHH
T ss_pred CCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 344 55688887776 78999999998777654432110 00011 11345666665554444444333333
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeec----------cCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCe
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDG----------YPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSG 196 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g----------~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G 196 (558)
+.+...+....+.+|+.+.|.|.+.| .|.|.+.|++++..+..+. ++.....+ +|.|.+++.+|+|
T Consensus 99 ~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G 177 (317)
T 2y25_A 99 KELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD-RVKTGVTGEQIWLQINEPTPNDKG 177 (317)
T ss_dssp HHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCS-SEEEEECSSEEEEEEESCCGGGCE
T ss_pred ccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCC-CeEEeccCCEEEEEECcCCcccCe
Confidence 33333344455678888888888887 7999999999999887654 44443332 4999999999999
Q ss_pred EEEEEEEeCCceeeEEEEEEEecc-----------------CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEGI-----------------FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR 259 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~~-----------------~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~ 259 (558)
.|+|.|.|..|....++.+.|... ...|.+... .... ..+..|....+. |.+
T Consensus 178 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~------~~v~~g~~~~l~---C~~ 246 (317)
T 2y25_A 178 KYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGG--LPDV------VTIQEGKALNLT---CNV 246 (317)
T ss_dssp EEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEB--CCSE------EEEETTSBBCEE---EEE
T ss_pred eEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCccccc--CCcc------EEEEcCCEEEEE---EEE
Confidence 999999999999988888876421 001111100 0111 122333344444 445
Q ss_pred CCCCCCcccccchhhhhhhhhh-hhhhc-c---cccchhhhhhhHHHhhc
Q psy10160 260 AGQLPSYGPHIKRAVEAEAAAA-DKKRR-S---RRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 260 ~g~~~~~~~w~~~~l~~~~~~~-~~~~~-g---rth~q~a~~~t~g~~~~ 304 (558)
.|.|+|.+.|++++........ .+... + ...+..+.....|.|..
T Consensus 247 ~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 296 (317)
T 2y25_A 247 WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGL 296 (317)
T ss_dssp ECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEE
T ss_pred ecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEE
Confidence 5899999999999765543321 11111 2 44555555555565543
No 158
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.61 E-value=2.4e-15 Score=138.20 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=91.7
Q ss_pred CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccCC
Q psy10160 13 KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEAT 91 (558)
Q Consensus 13 ~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~ 91 (558)
+++|.|.+++.+|+|.|+|.|.|..|... .+.|.|..+|...
T Consensus 53 ~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~------------------------------------- 95 (202)
T 1vca_A 53 TSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDP------------------------------------- 95 (202)
T ss_dssp EEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCC-------------------------------------
T ss_pred ccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCC-------------------------------------
Confidence 45799999999999999999999887643 4455555443221
Q ss_pred CCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCC---CeEEEEECCE
Q psy10160 92 SPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPI---PQVFWYKDGQ 168 (558)
Q Consensus 92 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~---p~i~W~~~g~ 168 (558)
.+.+. ..+.+|+.++|.|.+.|.|+ +.|.|+|++.
T Consensus 96 -----------------------------------------~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~ 133 (202)
T 1vca_A 96 -----------------------------------------EIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH 133 (202)
T ss_dssp -----------------------------------------EEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTE
T ss_pred -----------------------------------------EeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCe
Confidence 01111 34679999999999998644 3699999998
Q ss_pred EeccCCceEE------EccCCeEEEccCCCCCCeEEEEEEEeCCce-------eeEEEEEEEeccC
Q psy10160 169 VIENDGVHYR------ITESNRLHINQANATDSGEYRCVASNSYTS-------DENAVTIRVEGIF 221 (558)
Q Consensus 169 ~l~~~~~~~~------~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~-------~~~~~~l~V~~~~ 221 (558)
.+........ ......|.|..+..+|.|.|+|.|.|..|. .+.++.|+|..+|
T Consensus 134 ~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 134 LMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp EEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred ECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 8753210000 011234678888888999999999999876 3567888886554
No 159
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.61 E-value=5.8e-15 Score=119.52 Aligned_cols=93 Identities=22% Similarity=0.389 Sum_probs=81.3
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEEE
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.+..+ .+|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 84 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESS-KIHYTNTSGVLTLEILDCHTDDSGTYRAVCT 84 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCC-CEEEEECCCEEEEEEcCCCcccCEEEEEEEE
Confidence 357888888889999999999999999999999999999999987654 4544432 369999999999999999999
Q ss_pred eCCceeeEEEEEEEecc
Q psy10160 204 NSYTSDENAVTIRVEGI 220 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~ 220 (558)
|..|..+..+.|.|.+.
T Consensus 85 N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 85 NYKGEASDYATLDVTGG 101 (103)
T ss_dssp ETTEEEEEEEEEEEECC
T ss_pred eCCCcEEEEEEEEEECC
Confidence 99999999999999754
No 160
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.61 E-value=7.6e-16 Score=139.22 Aligned_cols=119 Identities=21% Similarity=0.238 Sum_probs=84.7
Q ss_pred ecCCeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 11 LNKNMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 11 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
..+++|.|.+++.+|+|.|+|.+.|..|.. .+..+.|.+....
T Consensus 49 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~------------------------------------ 92 (184)
T 2gi7_A 49 QDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVF------------------------------------ 92 (184)
T ss_dssp ESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSS------------------------------------
T ss_pred CcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcC------------------------------------
Confidence 456799999999999999999999987642 2222333321100
Q ss_pred CCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEE
Q psy10160 90 ATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQV 169 (558)
Q Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~ 169 (558)
.+|.+...+ ...+.+|+.+.|.|.+.+.| |.+.|+|+|..
T Consensus 93 --------------------------------------~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~ 132 (184)
T 2gi7_A 93 --------------------------------------AKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDP 132 (184)
T ss_dssp --------------------------------------CCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCC
T ss_pred --------------------------------------CCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCc
Confidence 122233333 34567899999999988765 69999999987
Q ss_pred eccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 170 IENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 170 l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
+.... . ....++.|.|.+++.+|+|.|+|.|.|..+
T Consensus 133 ~~~~~-~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 133 APYKN-P-ERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp TTSCC-C-CEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred Cccee-c-CCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 76422 1 122345799999999999999999999754
No 161
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.60 E-value=3.5e-15 Score=149.17 Aligned_cols=203 Identities=16% Similarity=0.210 Sum_probs=117.2
Q ss_pred CCceEec------CCeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEeC----CCCccCCC-Ccccc-CceeEEecc
Q psy10160 6 SENYELN------KNMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQAL----PSEKVADP-NAIDY-GTILSSAFP 72 (558)
Q Consensus 6 ~~r~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~~----p~~~~~~~-~~v~~-~~~~~~~~~ 72 (558)
.+|+.+. ..+|.|.+++.+|+|.|+|.+.|..+.. ....|.|... |......+ ..+.. ..+.+.|.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 4577653 2489999999999999999999955332 2445666531 22222222 22334 456688988
Q ss_pred CCC-CC-CcEEEEeCCcccCCC--Cce--eecccc---cee--------eceeEEeeccceeeEEee--e----------
Q psy10160 73 SES-AS-PVVTQTTTTTTEATS--PHV--YAALTH---CVP--------WSNVCLFGARSGYLKETQ--N---------- 123 (558)
Q Consensus 73 ~~~-p~-p~v~W~~~~~~~~~~--~~~--~~g~~~---~~~--------~~~~~~~~~~~~~~~~~~--~---------- 123 (558)
.+. |. |.+.|++++..+... ... ..+.|. .+. -.|.|.+.+..+...... .
T Consensus 145 ~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~dG~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~ 224 (344)
T 1za6_B 145 KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTC 224 (344)
T ss_dssp EEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHHBCEEEEEEEGGGTEEEEEEECCCCC------
T ss_pred eeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCCCcEEEEEEeCCCCccceEeeccccccccccc
Confidence 886 64 799999988653100 000 001000 000 245566665544321111 0
Q ss_pred ------------ceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCC--CeEEEEECCEEeccCC-ceEEEccCC-----
Q psy10160 124 ------------GGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPI--PQVFWYKDGQVIENDG-VHYRITESN----- 183 (558)
Q Consensus 124 ------------~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~g~~l~~~~-~~~~~~~~~----- 183 (558)
.....||.+...+......+|+.+.|.|.+.|.|+ +.+.|+|+|..+.... .++....++
T Consensus 225 ~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~ 304 (344)
T 1za6_B 225 PPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLY 304 (344)
T ss_dssp --------------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEE
T ss_pred CCCCCCccccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEE
Confidence 01234566555433322335777999999999633 5799999998775321 111223333
Q ss_pred -eEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 184 -RLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 184 -sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.|.|.....+|+|.|+|.|.|....
T Consensus 305 s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 305 SKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEEEECHHHHHTTCEEEEEEECTTST
T ss_pred EEEEEChHHccCCCeEEEEEEcCCCC
Confidence 3566666667899999999997644
No 162
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2.3e-15 Score=125.36 Aligned_cols=94 Identities=24% Similarity=0.443 Sum_probs=84.8
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.....++....+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 7 ~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (118)
T 2eo9_A 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSG 86 (118)
T ss_dssp CSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECSSC
T ss_pred CCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCC
Confidence 47778788888999999999999999999999999999999887655677777788999999999999999999999999
Q ss_pred eeeEEEEEEEeccC
Q psy10160 208 SDENAVTIRVEGIF 221 (558)
Q Consensus 208 ~~~~~~~l~V~~~~ 221 (558)
.....+.|.|.+++
T Consensus 87 ~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 87 EATWSAYIEVQEFG 100 (118)
T ss_dssp EEEEECCEEEECCS
T ss_pred cEEEEEEEEEEeCC
Confidence 99999999997654
No 163
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.60 E-value=5.7e-15 Score=147.75 Aligned_cols=231 Identities=13% Similarity=0.014 Sum_probs=122.7
Q ss_pred cCceeEEeccCCCCC-----------CcEEEEeCCcccC---------CCCceeec--------cccceeeceeEEeecc
Q psy10160 63 YGTILSSAFPSESAS-----------PVVTQTTTTTTEA---------TSPHVYAA--------LTHCVPWSNVCLFGAR 114 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~-----------p~v~W~~~~~~~~---------~~~~~~~g--------~~~~~~~~~~~~~~~~ 114 (558)
+..+.+.|...+.|. |.+.|++++.... ...+.... ......-.|.|.+.+.
T Consensus 22 G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 101 (349)
T 4dep_C 22 DEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNT 101 (349)
T ss_dssp TSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECS
T ss_pred CCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecC
Confidence 345668898887664 9999999874211 01111000 0000111345556655
Q ss_pred ceeeEEeeeceeeeCcEEE----ecCCceEeeCCCcEEEEeEe-----eccCCCeEEEEECCEEeccCCceEEEccCCeE
Q psy10160 115 SGYLKETQNGGYLVPVKVN----ITLETQVFGVGSDISIPCDV-----DGYPIPQVFWYKDGQVIENDGVHYRITESNRL 185 (558)
Q Consensus 115 ~~~~~~~~~~~~~~p~~~~----~~~~~~~v~~G~~v~L~C~~-----~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL 185 (558)
.+.......+.+..++... ..+....+.+|+.+.|.|.+ .|.|.|.+.|+|++..+.... ++. ..+..|
T Consensus 102 ~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~-~~~-~~~~~L 179 (349)
T 4dep_C 102 TYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN-NVI-PEGMNL 179 (349)
T ss_dssp SCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCS-SEE-EETTEE
T ss_pred CceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCcc-cee-ecCCEE
Confidence 5544444444444333221 12335567899999999985 889999999999999886532 332 234679
Q ss_pred EEccCCCCCCeEEEEEEEeCC-cee---eEEEEEEEeccCC---CCCCCCCCccccceeEEeceeeecccceeEEEEecc
Q psy10160 186 HINQANATDSGEYRCVASNSY-TSD---ENAVTIRVEGIFI---HPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCT 258 (558)
Q Consensus 186 ~I~~v~~~D~G~Y~C~a~N~~-G~~---~~~~~l~V~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~ 258 (558)
.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|..++. +|.+...+ ...+. .+.. +......|.
T Consensus 180 ~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~---~~~~~----~v~~---G~~v~l~C~ 249 (349)
T 4dep_C 180 SFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPN---DHVVY----EKEP---GEELLIPCT 249 (349)
T ss_dssp EEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC--------------------------CCCEE
T ss_pred EEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCC---CceeE----EEec---CCcEEEEEE
Confidence 999999999999999999987 554 5777788865432 22222111 11000 1112 333335555
Q ss_pred CC----CCCCCcccccchhhhhhhhhhhhhh--------------cccccchhhhhhhH-HHhhcc
Q psy10160 259 RA----GQLPSYGPHIKRAVEAEAAAADKKR--------------RSRRSLSVVNKWSL-RQAFTT 305 (558)
Q Consensus 259 ~~----g~~~~~~~w~~~~l~~~~~~~~~~~--------------~grth~q~a~~~t~-g~~~~~ 305 (558)
+. |.|+|.+.|++++........+... .....+..+..... |.|...
T Consensus 250 ~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~ 315 (349)
T 4dep_C 250 VYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCH 315 (349)
T ss_dssp EEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEE
T ss_pred EEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEE
Confidence 55 5799999999998665431111111 12245556666666 766653
No 164
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.60 E-value=4.3e-15 Score=146.30 Aligned_cols=198 Identities=14% Similarity=0.167 Sum_probs=124.4
Q ss_pred cccC-ceeEEeccCCCC-CCcEEEEeCCcccCC----CCce---------------eeccccceeeceeEEeeccceeeE
Q psy10160 61 IDYG-TILSSAFPSESA-SPVVTQTTTTTTEAT----SPHV---------------YAALTHCVPWSNVCLFGARSGYLK 119 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p-~p~v~W~~~~~~~~~----~~~~---------------~~g~~~~~~~~~~~~~~~~~~~~~ 119 (558)
+.+| .+.+.|...+.| .|.+.|++++..... ..+. ..|.|. |.+.+..+...
T Consensus 17 v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~-------C~a~n~~g~~~ 89 (315)
T 1itb_B 17 SSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYY-------CVVRNSSYCLR 89 (315)
T ss_dssp EETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCE-------ECCCSSSCCCC
T ss_pred EcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEE-------EEEeCCceEEE
Confidence 3444 556888888887 889999999764321 1111 134444 44444443333
Q ss_pred Eeeecee-eeCcEEEecC---CceEeeCCCcEEEEeEe------eccCCCeEEEEECCEEeccCCceEEEccCCeEEEcc
Q psy10160 120 ETQNGGY-LVPVKVNITL---ETQVFGVGSDISIPCDV------DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQ 189 (558)
Q Consensus 120 ~~~~~~~-~~p~~~~~~~---~~~~v~~G~~v~L~C~~------~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~ 189 (558)
......+ ..+|.+...+ ....+.+|+.+.|.|.+ .|+|.|.+.|+|++..+..+..++. ..+++|.|.+
T Consensus 90 ~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~-~~~~~L~i~~ 168 (315)
T 1itb_B 90 IKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFS-GVKDRLIVMN 168 (315)
T ss_dssp EECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEE-EETTEEEESS
T ss_pred EEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEe-ecCceEEEEe
Confidence 3222221 1233332222 23567899999999998 8999999999999999876554543 4567999999
Q ss_pred CCCCCCeEEEEEEE-eCCcee---eEEEEEEEecc--CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC
Q psy10160 190 ANATDSGEYRCVAS-NSYTSD---ENAVTIRVEGI--FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL 263 (558)
Q Consensus 190 v~~~D~G~Y~C~a~-N~~G~~---~~~~~l~V~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~ 263 (558)
++.+|+|.|+|.|. |..|.. ...+.+.+..+ ..+|.+...+ ...+ .+..|... ...|.+.|.|
T Consensus 169 v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~---~~~~-----~~~~g~~v---~l~C~~~g~P 237 (315)
T 1itb_B 169 VAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPA---NETM-----EVDLGSQI---QLICNVTGQL 237 (315)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCC---SEEE-----ECCSSSCE---EEEEEEEECT
T ss_pred ceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCC---CCcE-----EEeCCCcE---EEEEEEecCC
Confidence 99999999999999 888887 34455544322 2233332211 1111 12233333 4555566899
Q ss_pred CCcccccchhhhhh
Q psy10160 264 PSYGPHIKRAVEAE 277 (558)
Q Consensus 264 ~~~~~w~~~~l~~~ 277 (558)
+|.+.|++++....
T Consensus 238 ~p~i~W~~~g~~i~ 251 (315)
T 1itb_B 238 SDIAYWKWNGSVID 251 (315)
T ss_dssp TSEEEEEETTEECC
T ss_pred CCeeEEEECCEECC
Confidence 99999999876544
No 165
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.60 E-value=5.2e-15 Score=138.57 Aligned_cols=130 Identities=21% Similarity=0.342 Sum_probs=91.0
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCC-cceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCccc
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGL-GRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTE 89 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~-g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~ 89 (558)
.++.|.|.+++.+|+|.|+|.+.|.. +... +..+.|...|..
T Consensus 75 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~------------------------------------ 118 (231)
T 2pet_A 75 SQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEA------------------------------------ 118 (231)
T ss_dssp TTCCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCC------------------------------------
T ss_pred CCceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCC------------------------------------
Confidence 44679999999999999999999976 4432 445555544321
Q ss_pred CCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcE-EEEeEe-eccCCCeEEEEECC
Q psy10160 90 ATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDI-SIPCDV-DGYPIPQVFWYKDG 167 (558)
Q Consensus 90 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v-~L~C~~-~g~P~p~i~W~~~g 167 (558)
|.+...+....+.+|+.+ .|.|.+ .|.|.|.+.|+|++
T Consensus 119 ----------------------------------------~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~ 158 (231)
T 2pet_A 119 ----------------------------------------TEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNG 158 (231)
T ss_dssp ----------------------------------------CEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETT
T ss_pred ----------------------------------------cEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECC
Confidence 222233344556688887 999999 99999999999999
Q ss_pred EEeccCC---ceEEEcc------C------CeEEEccCCCCCCeEEEEEEEeC-----Cce-eeEEEEEEE
Q psy10160 168 QVIENDG---VHYRITE------S------NRLHINQANATDSGEYRCVASNS-----YTS-DENAVTIRV 217 (558)
Q Consensus 168 ~~l~~~~---~~~~~~~------~------~sL~I~~v~~~D~G~Y~C~a~N~-----~G~-~~~~~~l~V 217 (558)
..+.... .++.+.. + +.|.|.....+|.|.|+|.|.|. .|. .+..+.|.|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 159 QRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp EECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 9987654 2333322 1 45888755566799999999994 444 344455444
No 166
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.60 E-value=1.8e-15 Score=137.10 Aligned_cols=61 Identities=16% Similarity=0.402 Sum_probs=53.8
Q ss_pred eeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.+.|.|.+ |.|.|.|+|+|..+.... ..+++|.|.+++.+|+|.|+|.|.|..|+.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~-----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIISPLN-----ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECCCSS-----CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECcccC-----CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 4589999999999 899999999999987533 245689999999999999999999999876
No 167
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.59 E-value=6.9e-15 Score=135.84 Aligned_cols=79 Identities=16% Similarity=0.377 Sum_probs=62.3
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc----CCeEEEccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE----SNRLHINQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~----~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
...+..|+.+.+.|.+.|.|.|.|.|++++..+.... .+.... .+.|.|.++..+|+|.|+|.|.|..|..+..+
T Consensus 127 ~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~ 205 (218)
T 4frw_A 127 ALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSR-SFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRI 205 (218)
T ss_dssp CEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEE-EEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred eeeeeeccccceeeeccCCcCceEEEEECCcccccCc-eEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEE
Confidence 4445678999999999999999999999988775432 222111 23699999999999999999999999887666
Q ss_pred EEEE
Q psy10160 214 TIRV 217 (558)
Q Consensus 214 ~l~V 217 (558)
.+.|
T Consensus 206 t~~v 209 (218)
T 4frw_A 206 THIL 209 (218)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5555
No 168
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.59 E-value=2.5e-15 Score=122.88 Aligned_cols=96 Identities=25% Similarity=0.450 Sum_probs=72.3
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+...........+++|.|.+++.+|+|.|+|.|.|..
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 87 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVL 87 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC---
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCC
Confidence 35777777888889999999999999999999999999999888765544444456789999999999999999999999
Q ss_pred ceeeEEEEEEEeccCC
Q psy10160 207 TSDENAVTIRVEGIFI 222 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~ 222 (558)
|.....+.|.|.+++.
T Consensus 88 g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 88 GCAKVEAFFIIEGAQE 103 (108)
T ss_dssp -CEEEEEEEEEEC---
T ss_pred CceEEEEEEEEeCCCc
Confidence 9999999999987653
No 169
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.59 E-value=1.2e-14 Score=116.75 Aligned_cols=92 Identities=25% Similarity=0.472 Sum_probs=80.3
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGG-KYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCC-CEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 357788888888999999999999999999999999999999987654 55554433 79999999999999999999
Q ss_pred eCCceeeEEEEEEEec
Q psy10160 204 NSYTSDENAVTIRVEG 219 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~ 219 (558)
|..|.....+.|.|.+
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 83 NSAGSVSSSCKLTIKA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEeEEEEEEEEe
Confidence 9999999999998853
No 170
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=8.2e-15 Score=117.91 Aligned_cols=92 Identities=26% Similarity=0.455 Sum_probs=79.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEccCC--eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRITESN--RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~--sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..... ++....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 477777788888999999999999999999999999999999876542 33333444 899999999999999999999
Q ss_pred CCceeeEEEEEEEec
Q psy10160 205 SYTSDENAVTIRVEG 219 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~ 219 (558)
..|..+..+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEe
Confidence 999999999999864
No 171
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.59 E-value=5.4e-15 Score=134.81 Aligned_cols=167 Identities=18% Similarity=0.175 Sum_probs=114.3
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc--CC--eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE--SN--RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~--~~--sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+...+.++.+.. ++ +|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 478888888899999999999999999999999999999999876655555432 33 89999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-hh
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-AD 282 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~~ 282 (558)
|..|.....+.|.|..++.... .+...... ...+..|....+.| .+.|.|+|.+.|++++....... ..
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~~---~~~~~~~~----~~~~~~g~~~~l~C---~~~g~p~p~i~W~~~~~~~~~~~~~~ 152 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIHL---PKTLEGMG----AVHALRGEVVSIKI---PFSGKPDPVITWQKGQDLIDNNGHYQ 152 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEECC---SSCBTTBE----EEEEETTCCCEEEE---EEEEESCCEEEEEESSCEECSSSSCE
T ss_pred ECCCceeEEEEEEEcCCCcCCC---CccccccC----eEEEeCCCEEEEEE---EEEecCCCcEEEEECCEEeecCCCEE
Confidence 9999999999999876542111 11001000 01123333444444 45588999999999876543222 11
Q ss_pred h---hhcccccchh-hhhhhHHHhhc
Q psy10160 283 K---KRRSRRSLSV-VNKWSLRQAFT 304 (558)
Q Consensus 283 ~---~~~grth~q~-a~~~t~g~~~~ 304 (558)
. ...+...+.. +.....|.|..
T Consensus 153 ~~~~~~~~~L~i~~~~~~~d~G~Y~C 178 (197)
T 2j8h_A 153 VIVTRSFTSLVFPNGVERKDAGFYVV 178 (197)
T ss_dssp EEECSSEEEEECTTCCCGGGCEEEEE
T ss_pred EEEcCCceEEEEeCCCCcccCEeEEE
Confidence 1 1123344444 55566665544
No 172
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.59 E-value=3.1e-15 Score=138.34 Aligned_cols=131 Identities=18% Similarity=0.356 Sum_probs=92.6
Q ss_pred CceEe----cCCeEEEcCCCCCCCEEEEEEEEeCCcc--eE--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCC
Q psy10160 7 ENYEL----NKNMLTIKRVEPERLGAYTCQAYNGLGR--AV--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASP 78 (558)
Q Consensus 7 ~r~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~g~--~~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p 78 (558)
+|+.+ .+.+|.|.+++.+|+|.|+|.+.|..+. .. ...+.|...+.
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~-------------------------- 112 (213)
T 3mj8_L 59 DHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPN-------------------------- 112 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCC--------------------------
T ss_pred CcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCC--------------------------
Confidence 46653 3457999999999999999999998873 22 23444432110
Q ss_pred cEEEEeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeecc-C
Q psy10160 79 VVTQTTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGY-P 157 (558)
Q Consensus 79 ~v~W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P 157 (558)
.+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 113 -------------------------------------------------~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p 143 (213)
T 3mj8_L 113 -------------------------------------------------AAPSVTLFPPSSEELKTNQATLVCMINGFYP 143 (213)
T ss_dssp -------------------------------------------------BCCEEEEECCCHHHHTTTEEEEEEEEEEEBS
T ss_pred -------------------------------------------------CCCeEEccCCCcccccCCcEEEEEEeeceeC
Confidence 23444444444445589999999999996 3
Q ss_pred C-CeEEEEECCEEeccC---------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 158 I-PQVFWYKDGQVIEND---------GVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 158 ~-p~i~W~~~g~~l~~~---------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
+ +.+.|+|+|..+... +..+.. .+.|.|.++..+|+|.|+|.|.|..+....++.
T Consensus 144 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 144 ADVAVTWEADGTPITQGVKTTQPSKSDSKYMA--TSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp SCCEEEEEETTEEECTTEEECCCEEETTEEEE--EEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEcCCcccCCCcccCCcCccCCcEEE--EEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 3 389999999988642 112221 246999999999999999999999877665543
No 173
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.59 E-value=1.8e-14 Score=133.26 Aligned_cols=142 Identities=20% Similarity=0.245 Sum_probs=101.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc---cCCeEEEccC-CCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT---ESNRLHINQA-NATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~---~~~sL~I~~v-~~~D~G~Y~C~a~ 203 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.......... .+.+|.|.++ +.+|+|.|+|.+.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 57888888999999999999999999999999999999999987644222221 2236999999 5999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCC-CCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhh
Q psy10160 204 NSYTSDENAVTIRVEGIFIHP-SCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEA 278 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~ 278 (558)
|..|.....+.|.|...+..| ..+......... .+..|.... ..|.+.|.|+|.+.|++++.....
T Consensus 85 n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~------~~~~g~~v~---l~C~~~g~p~p~v~W~~~g~~l~~ 151 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLK------VVERTRTAT---MLCAASGNPDPEITWFKDFLPVDT 151 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCE------EEETTSCEE---EEEEEECSSCCEEEEEETTEEC--
T ss_pred cCCCcEEEEEEEEEeccCccCCCcceeecCCcce------eEecCCCEE---EEEEecCCCCCeEEEEECCccccC
Confidence 999999899999997653221 111111111111 122333344 445556899999999999765543
No 174
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.59 E-value=2.5e-14 Score=130.26 Aligned_cols=121 Identities=17% Similarity=0.310 Sum_probs=83.6
Q ss_pred CceEe-cCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEe
Q psy10160 7 ENYEL-NKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTT 84 (558)
Q Consensus 7 ~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~ 84 (558)
+|+.+ .+++|.|.+++.+|+|.|+|.+.|..+... .+.|.|...+.
T Consensus 62 ~R~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~-------------------------------- 109 (193)
T 2if7_A 62 KRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLR-------------------------------- 109 (193)
T ss_dssp TTEEECTTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCE--------------------------------
T ss_pred ccEEECCCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCC--------------------------------
Confidence 35554 468999999999999999999999887643 33444432210
Q ss_pred CCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCC-cEEEEeEeecc-CCCeEE
Q psy10160 85 TTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGS-DISIPCDVDGY-PIPQVF 162 (558)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~-~v~L~C~~~g~-P~p~i~ 162 (558)
.|.+.... .....|. .+.|.|.+.|. |.|.+.
T Consensus 110 --------------------------------------------~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~ 143 (193)
T 2if7_A 110 --------------------------------------------NIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFR 143 (193)
T ss_dssp --------------------------------------------EEEEEECC--C---CSSEEEEEEEEEESCCTTCEEE
T ss_pred --------------------------------------------CCeEecCc--eeecCCCceEEEEEEEecCCCceEEE
Confidence 01111111 1223455 89999999995 589999
Q ss_pred EEECCEEeccCCceEEEccCCeEEEccCCCC-CCeEEEEEEEeCCceeeEEEE
Q psy10160 163 WYKDGQVIENDGVHYRITESNRLHINQANAT-DSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 163 W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~-D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
|+++|..+.. ++.|.|.....+ |+|.|+|.|.|..|..+..+.
T Consensus 144 W~~~g~~l~~---------~~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 144 WEALGNTLSS---------QPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp EEETTEEEES---------SSEEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred EEeCCEEcCC---------CCeEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 9999876632 235777655554 899999999999999866543
No 175
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=4.9e-15 Score=119.06 Aligned_cols=91 Identities=26% Similarity=0.438 Sum_probs=78.9
Q ss_pred eeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 126 YLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 126 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
+..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ......+.+|.|.+++.+|+|.|+|.|.|.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 86 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYAR-STCEAGVAELHIQDALPEDHGTYTCLAENA 86 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCC-CEEETTEEEEEECSCCTTCCBCEEEEEECS
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccc-eEeeCCeEEEEECCCChhhCEEEEEEEEEC
Confidence 3468888888889999999999999999999999999999998887543 333344468999999999999999999999
Q ss_pred CceeeEEEEEEE
Q psy10160 206 YTSDENAVTIRV 217 (558)
Q Consensus 206 ~G~~~~~~~l~V 217 (558)
.|..+..+.|.|
T Consensus 87 ~g~~~~~~~l~V 98 (99)
T 2yr3_A 87 LGQVSCSAWVTV 98 (99)
T ss_dssp SCEEEEECCEEE
T ss_pred CCeEEEEEEEEE
Confidence 999988888877
No 176
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=3.3e-15 Score=122.67 Aligned_cols=98 Identities=26% Similarity=0.470 Sum_probs=83.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc--CC--eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE--SN--RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~--~~--sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.....++.+.. ++ +|.|.+++.+|+|.|+|.|.
T Consensus 7 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm2_A 7 GAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAA 86 (110)
T ss_dssp CCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEEE
T ss_pred CCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEEE
Confidence 467777778888999999999999999999999999999998876545665543 33 69999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCC
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~ 225 (558)
|..|.....+.|.|..++.+|.
T Consensus 87 N~~g~~~~~~~l~V~~~~~~P~ 108 (110)
T 2dm2_A 87 NPQGRISCTGRLMVQAVNSGPS 108 (110)
T ss_dssp CTTCCEEECCCEEEECCSCCSS
T ss_pred ECCCeEEEEEEEEEECCCCCCC
Confidence 9999999999999987765543
No 177
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.58 E-value=2e-14 Score=128.68 Aligned_cols=146 Identities=14% Similarity=0.147 Sum_probs=98.9
Q ss_pred ccccC-ceeEEeccCCCCCC-cEEEEeCCcccCCCCce---------eeccccceeeceeEEeeccceeeEEeeeceeee
Q psy10160 60 AIDYG-TILSSAFPSESASP-VVTQTTTTTTEATSPHV---------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLV 128 (558)
Q Consensus 60 ~v~~~-~~~~~~~~~~~p~p-~v~W~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (558)
.+..| .+.+.|...+.+.| .+.|++++..+...... ..|.|.|.+.+ ..... ...+.+..
T Consensus 15 ~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~-------~~~s~--~~~l~V~~ 85 (176)
T 1f2q_A 15 RIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETNSSLNIVNAKFEDSGEYKCQHQQ-------VNESE--PVYLEVFS 85 (176)
T ss_dssp EEETTCCEEEECCTTCC----CCEEEETTEECSCCSSEEEECSCCGGGCEEEEEECTT-------SSCCC--CEEEEEEC
T ss_pred ceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCceEEEEeccceecCEEEEEEcCC-------ccccc--cEEEEEeC
Confidence 34455 56688988888876 69999998776654322 25666666543 22111 11112223
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
++... ......+.+|+.+.|.|.+ .+.|.|.+.|+|+|..+... ..++.|.|.+++.+|+|.|+|.|.|..+
T Consensus 86 ~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 158 (176)
T 1f2q_A 86 DWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW------YENHNISITNATVEDSGTYYCTGKVWQL 158 (176)
T ss_dssp SSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC------CCSSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred cceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee------cCCCeEEECCCCcccCEEEEEEEEeCCc
Confidence 33333 3334577899999999999 56777899999999988543 2356899999999999999999999754
Q ss_pred e-eeEEEEEEEeccC
Q psy10160 208 S-DENAVTIRVEGIF 221 (558)
Q Consensus 208 ~-~~~~~~l~V~~~~ 221 (558)
. .+..+.|.|.+++
T Consensus 159 ~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 159 DYESEPLNITVIKAP 173 (176)
T ss_dssp EEECCCEEEEEECSC
T ss_pred ceEecCEEEEEecCC
Confidence 4 4567889997665
No 178
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.58 E-value=2.8e-14 Score=128.36 Aligned_cols=120 Identities=18% Similarity=0.360 Sum_probs=86.1
Q ss_pred CCceEe-cCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEE
Q psy10160 6 SENYEL-NKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQT 83 (558)
Q Consensus 6 ~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~ 83 (558)
++|+.+ .+++|.|.+++.+|+|.|+|.+.|..|... +..+.|.+.... +
T Consensus 57 ~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~----------------------~------- 107 (182)
T 1hnf_A 57 KDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERV----------------------S------- 107 (182)
T ss_dssp CTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCC----------------------C-------
T ss_pred CCeEEECCCCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcC----------------------C-------
Confidence 456664 678999999999999999999999888753 344444443211 0
Q ss_pred eCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEE
Q psy10160 84 TTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFW 163 (558)
Q Consensus 84 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W 163 (558)
+|.+.. .+..+.|.|.+.+.|.|.|.|
T Consensus 108 ---------------------------------------------~P~i~~--------~~~~v~L~C~~~~~p~~~~~W 134 (182)
T 1hnf_A 108 ---------------------------------------------KPKISW--------TCINTTLTCEVMNGTDPELNL 134 (182)
T ss_dssp ---------------------------------------------CCEEEE--------ETTTTEEEEECSSCSSCEEEE
T ss_pred ---------------------------------------------CCEEEE--------ccCcEEEEeEccCCCCCEEEE
Confidence 111111 123688999999999999999
Q ss_pred EECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 164 YKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 164 ~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
+++|..+.. .+..|.+.. ..+|+|.|+|.|.|..|.......+.
T Consensus 135 ~~~g~~l~~--------~~~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 135 YQDGKHLKL--------SQRVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp EESSCEEEE--------ESSCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred EECCEECCC--------CCcEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 999988711 223455433 57899999999999999988776654
No 179
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=3.4e-15 Score=122.53 Aligned_cols=98 Identities=23% Similarity=0.398 Sum_probs=83.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceE-EEccCC--eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHY-RITESN--RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~-~~~~~~--sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+....... ....++ +|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 87 (110)
T 2dm3_A 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATN 87 (110)
T ss_dssp CCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEEC
T ss_pred CCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEEC
Confidence 57888888889999999999999999999999999999998887654333 223333 899999999999999999999
Q ss_pred CCceeeEEEEEEEeccCCCCC
Q psy10160 205 SYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~~~p~ 225 (558)
..|..+..+.|.|.+++.+|.
T Consensus 88 ~~g~~~~~~~l~V~~~p~~P~ 108 (110)
T 2dm3_A 88 RAGQNSFSLELVVAAKESGPS 108 (110)
T ss_dssp SSCEEEECCEEEEECCCCSSS
T ss_pred CCCEEEEEEEEEEeCCCCCCC
Confidence 999999999999987765553
No 180
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.56 E-value=5.4e-15 Score=146.34 Aligned_cols=193 Identities=15% Similarity=0.152 Sum_probs=112.5
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEE--Ee---CCCCccCCCCc--ccc-CceeEEeccCCC-CCC---cEEE
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTL--QA---LPSEKVADPNA--IDY-GTILSSAFPSES-ASP---VVTQ 82 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V--~~---~p~~~~~~~~~--v~~-~~~~~~~~~~~~-p~p---~v~W 82 (558)
.|.|.++..+|+|.|+|.|.|..+.. ...+.+ .. .|.....+|.. +.. ..+.+.|...+. |.| .|.|
T Consensus 73 ~l~i~~~~~~d~g~Y~C~a~n~~~~~-~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W 151 (323)
T 2wqr_A 73 ELTLSQKHWLSDRTYTCQVTYQGHTF-EDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTW 151 (323)
T ss_dssp EEEEEHHHHHTTCCEEEEEEETTEEE-EEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEE
T ss_pred EEEEcHHHcCCCCcEEEEEEeCCCCc-ceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEE
Confidence 57788888889999999999987654 222221 00 12222333332 333 466788887775 566 8999
Q ss_pred EeCCcccCCC-Ccee----eccc---cceee---------ceeEEeecccee--eEEeeec--eeeeCcEEEecCCceEe
Q psy10160 83 TTTTTTEATS-PHVY----AALT---HCVPW---------SNVCLFGARSGY--LKETQNG--GYLVPVKVNITLETQVF 141 (558)
Q Consensus 83 ~~~~~~~~~~-~~~~----~g~~---~~~~~---------~~~~~~~~~~~~--~~~~~~~--~~~~p~~~~~~~~~~~v 141 (558)
++++...... .... .+.+ ..+.+ .|.|.+.+.... ....... ....+|.+...+.....
T Consensus 152 ~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~ 231 (323)
T 2wqr_A 152 SRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWP 231 (323)
T ss_dssp EETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCT
T ss_pred EECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHH
Confidence 9975333221 1100 0100 01111 345666555321 1111111 12346665543333222
Q ss_pred eCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCCceE---EEccC------CeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 142 GVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDGVHY---RITES------NRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~---~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
..|+.++|.|.+.|. |.+ .|.|+|+|..+....... ....+ +.|.|.++..+|+|.|+|.|.|..+.
T Consensus 232 ~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 232 GSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp TCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred hcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 349999999999994 443 799999999886431000 01112 36999999999999999999998876
No 181
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=2.8e-14 Score=135.30 Aligned_cols=90 Identities=16% Similarity=0.295 Sum_probs=65.0
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE--CCEEec-----------cCCceEEEccC---CeEEEccCCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK--DGQVIE-----------NDGVHYRITES---NRLHINQANA 192 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--~g~~l~-----------~~~~~~~~~~~---~sL~I~~v~~ 192 (558)
++.+...+....+.+|+.++|.|.+.|.|.|.+.|+| ++..+. ....++.+... .+|.|.+++.
T Consensus 135 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 214 (247)
T 2ghw_B 135 ETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEP 214 (247)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCG
T ss_pred ceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCH
Confidence 4444555666778999999999999999999999999 554331 11234544322 3699999999
Q ss_pred CCCeEEEEEEEeCCcee-eEEEEEEEe
Q psy10160 193 TDSGEYRCVASNSYTSD-ENAVTIRVE 218 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~-~~~~~l~V~ 218 (558)
+|+|.|+|.|.|..+.. .....|.|.
T Consensus 215 ~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 215 EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99999999999865433 244566665
No 182
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.56 E-value=1.9e-14 Score=115.58 Aligned_cols=92 Identities=24% Similarity=0.469 Sum_probs=79.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC-CceEEEccC---CeEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND-GVHYRITES---NRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+... ..++.+..+ ++|.|.+++.+|+|.|+|.|.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 4677777788888999999999999999999999999999988642 335555544 579999999999999999999
Q ss_pred eCCceeeEEEEEEEec
Q psy10160 204 NSYTSDENAVTIRVEG 219 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~ 219 (558)
|..|..+..+.|.|.+
T Consensus 84 n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEEEEEEEEEEe
Confidence 9999999999998863
No 183
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.56 E-value=2e-14 Score=130.75 Aligned_cols=138 Identities=14% Similarity=0.250 Sum_probs=103.4
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.+..++ +|.|.+++.+|+|.|+|.+.
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSR-KYKMSSDGRTHTLTVMTEEQEDEGVYTCIAT 83 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCS-SEEEEESSSEEEEEEECCSGGGCEEEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCc-cEEEEeCCCEEEEEEecCCccCCEEEEEEEE
Confidence 357888888889999999999999999999999999999999987654 55555544 79999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
|..|.....+.|.|..++...... + ...... +..|.... ..|.+.+.|+|.+.|++++....
T Consensus 84 n~~~~~~~~~~l~v~~~p~~~~~~--~-~~~~~~------~~~g~~~~---l~C~~~~~p~p~v~W~~~~~~~~ 145 (197)
T 3lcy_A 84 NEVGEVETSSKLLLQATPQFHPGY--P-LKEKYY------GAVGSTLR---LHVMYIGRPVPAMTWFHGQKLLQ 145 (197)
T ss_dssp CSSCEEEEEEEEEEEEEEEECTTS--C-CCSEEE------EETTSCEE---EEEEEEEESCCEEEEEETTEECC
T ss_pred CCCCceeEEEEEEEEcCCCCCCCc--c-CCccee------ecCCCeEE---EEEEEeeeeCCeeEEeECCEECC
Confidence 999999888888887554222111 1 111111 12223333 44555589999999999875543
No 184
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=4.3e-14 Score=117.54 Aligned_cols=94 Identities=29% Similarity=0.478 Sum_probs=76.2
Q ss_pred eCcEEEe---cCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc-CCeEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNI---TLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE-SNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~---~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+......+.... ..+|.|.+++.+|+|.|+|.|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 99 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQ 99 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEE
Confidence 4666654 35677889999999999999999999999999999873322222222 2359999999999999999999
Q ss_pred eCCceeeEEEEEEEeccC
Q psy10160 204 NSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~ 221 (558)
|..|..+..+.|.|.+.|
T Consensus 100 N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 100 IENMKDTATIRIRVVEKA 117 (118)
T ss_dssp CSSCEECCEEEEEEECCC
T ss_pred eCCCeEEEEEEEEEEcCC
Confidence 999999999999997543
No 185
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.55 E-value=3.1e-14 Score=124.53 Aligned_cols=104 Identities=28% Similarity=0.480 Sum_probs=84.8
Q ss_pred eeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc--cC--CeEEEccCCC
Q psy10160 117 YLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT--ES--NRLHINQANA 192 (558)
Q Consensus 117 ~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~--~~--~sL~I~~v~~ 192 (558)
.+.......+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.+. .+ .+|.|.+++.
T Consensus 29 ~~~~~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~-~~~~~~~~~~~~~L~I~~v~~ 107 (154)
T 1fhg_A 29 FLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESR-HFQIDYDEEGNCSLTISEVCG 107 (154)
T ss_dssp -----CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSS-SEEEEECTTCEEEEEESSCCG
T ss_pred eeeehhcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCC-cEEEEECCCCeEEEEECCCCh
Confidence 3344445556678889888889999999999999999999999999999999987654 55443 22 3899999999
Q ss_pred CCCeEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 193 TDSGEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
+|+|.|+|.|.|..|.....+.|.|..++
T Consensus 108 ~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p 136 (154)
T 1fhg_A 108 DDDAKYTCKAVNSLGEATCTAELLVETMG 136 (154)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred hcCEEEEEEEEECCCeEEEEEEEEEeCcC
Confidence 99999999999999999999999997554
No 186
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.55 E-value=2.4e-14 Score=139.21 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=123.8
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEeCCccc----CCC--------CceeeccccceeeceeEEeeccceeeEEeeeceee
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTTTTTTE----ATS--------PHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYL 127 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~----~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (558)
+..| .+.+.|...+ .+.|++++..+ ... .....|.|.|.+.+ +. .....+.+.
T Consensus 24 v~~G~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n---------g~-~~~~~l~V~ 89 (290)
T 2o26_X 24 VEAGDTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN---------GL-TSSIYVFVR 89 (290)
T ss_dssp EETTSCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESS---------SC-EEEEEEEEE
T ss_pred EcCCCcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeC---------Cc-cEEEEEEEe
Confidence 3444 5668888776 89999998766 111 11124555555544 11 223333444
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCC-CeEEE-EECCEEeccCCceEEEccCCeEEEccCCCCCCe-EEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPI-PQVFW-YKDGQVIENDGVHYRITESNRLHINQANATDSG-EYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~-p~i~W-~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~a~N 204 (558)
.++.+...+....+.+|+.+.|.|.+.+ |. |.+.| .++|..+..+ .++....++.|.|.+++.+|+| .|+|.|.|
T Consensus 90 ~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~-~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n 167 (290)
T 2o26_X 90 DPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTD-LTFVPNPKAGITIKNVKRAYHRLCVRCAAQR 167 (290)
T ss_dssp CSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTT-CEEEEETTTEEEEESCCGGGTTCEEEEEEEE
T ss_pred CCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCC-CceeeCCCCCEEEecccHHHCCCEEEEEEEE
Confidence 5555556677788899999999999996 77 99999 4688777654 4777777789999999999999 99999999
Q ss_pred CCceee-EEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCc-ccccchhhh
Q psy10160 205 SYTSDE-NAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSY-GPHIKRAVE 275 (558)
Q Consensus 205 ~~G~~~-~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~-~~w~~~~l~ 275 (558)
..|... ..+.|.|.... .+|.+...+. . ..+..|.... ..|.+.|.|.|. +.|++++..
T Consensus 168 ~~~~~~s~~~~l~V~~~~~~~P~i~~~~~--~-------~~v~~G~~v~---l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 168 DGTWLHSDKFTLKVREAIKAIPVVSVPET--S-------HLLKKGDTFT---VVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp TTEEEECCCEEEEEECCCCSCCEEECSCS--B-------CCCCTTCCEE---EEEEEEESSTTCEEEEEEESSS
T ss_pred CCceEEeEEEEEEEEeCCCCCCccccCCC--c-------ceEecCCcEE---EEEEEecCCcceeEEEecCCCC
Confidence 966543 45788886422 3333322111 1 1122233333 455555889997 999999766
No 187
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.55 E-value=1.6e-14 Score=114.99 Aligned_cols=87 Identities=24% Similarity=0.463 Sum_probs=76.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.||.+...+....+.+|+.+.|.|.+.|.| |.+.|+|++..+..++ ++.+. +++|.|.+++.+|+|.|+|.|.|..|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~-~~~~~-~~~L~i~~~~~~D~G~Y~C~a~n~~g 84 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESN-RTRIT-GEEVEVRDSIPADSGLYACVTSSPSG 84 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCS-SEEEC-SSEEEESSCCGGGSEEEEEEEEETTE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCC-CEEEe-CCEEEECCCChHHCEEEEEEeccCCC
Confidence 366677778888899999999999999998 8999999999887654 55554 67999999999999999999999999
Q ss_pred eeeEEEEEEE
Q psy10160 208 SDENAVTIRV 217 (558)
Q Consensus 208 ~~~~~~~l~V 217 (558)
.....+.|.|
T Consensus 85 ~~~~~~~l~V 94 (95)
T 2ckn_A 85 SDTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEEE
T ss_pred cEEEEEEEEE
Confidence 9988888887
No 188
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.55 E-value=2e-14 Score=141.12 Aligned_cols=221 Identities=10% Similarity=0.012 Sum_probs=128.4
Q ss_pred CCCCCCcEEEEeCCcccCCCCceeeccc---cceee---------ceeEEeeccceeeEEeeeceeee------------
Q psy10160 73 SESASPVVTQTTTTTTEATSPHVYAALT---HCVPW---------SNVCLFGARSGYLKETQNGGYLV------------ 128 (558)
Q Consensus 73 ~~~p~p~v~W~~~~~~~~~~~~~~~g~~---~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~------------ 128 (558)
.+.|.|.+.|++++..+..+.+...... ..+.+ .|.|.+.+..+... .....+..
T Consensus 27 ~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~ 105 (312)
T 2y23_A 27 KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHK 105 (312)
T ss_dssp SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCC
Confidence 6689999999999988876554431111 12222 34666666544222 11111110
Q ss_pred CcEEEecC-CceEeeCCCcEEEEeEee-ccCCCeEEEEECCEEeccCCceEEEccC---C--eEEEccCCCCCCeEEEEE
Q psy10160 129 PVKVNITL-ETQVFGVGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRITES---N--RLHINQANATDSGEYRCV 201 (558)
Q Consensus 129 p~~~~~~~-~~~~v~~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~--sL~I~~v~~~D~G~Y~C~ 201 (558)
+|.+...+ ....+.+|+.+.|.|.+. +.|.|.+.|++++..+.... ++.+..+ + +|.|.+++.+|+|.|+|.
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 184 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP-KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 184 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSS-SCEEEEETTTTEEEEEESCCCGGGCEEEEEE
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCC-cEEEEEccCCCEEEEEEccCCcccCEeEEEE
Confidence 44443333 377789999999999999 89999999999999987654 4444332 2 499999999999999999
Q ss_pred EEeCCceeeEEEEEEEeccCC-----------CCCC-CCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-ccc
Q psy10160 202 ASNSYTSDENAVTIRVEGIFI-----------HPSC-RDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS-YGP 268 (558)
Q Consensus 202 a~N~~G~~~~~~~l~V~~~~~-----------~p~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~-~~~ 268 (558)
+.|..+..... +.+.+... ++.. ...|.+. ......+.. +......|.+.+.|+| .+.
T Consensus 185 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~v~~---G~~~~l~C~~~~~p~~~~v~ 255 (312)
T 2y23_A 185 LQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV----EYLSWEVTG---ECNVLLKCKVANIKKETHIV 255 (312)
T ss_dssp EESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEE----EEEEEEEET---TTEEEEEEEEESCCSSCEEE
T ss_pred EEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCcee----ecceEEEeC---CCEEEEEEEEcCCCCCCEEE
Confidence 98765554443 33321000 0000 0001110 000112233 4445556666688888 999
Q ss_pred ccchhhhhhhhh-hhhhh-cccccchhhhhhhHHHhhc
Q psy10160 269 HIKRAVEAEAAA-ADKKR-RSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 269 w~~~~l~~~~~~-~~~~~-~grth~q~a~~~t~g~~~~ 304 (558)
|++++....... ..... .+...+..+.+...|.|..
T Consensus 256 W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 293 (312)
T 2y23_A 256 WYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEV 293 (312)
T ss_dssp EEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEE
T ss_pred EeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEE
Confidence 999876655332 11111 1344555566666665554
No 189
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.54 E-value=7.2e-15 Score=135.90 Aligned_cols=72 Identities=19% Similarity=0.329 Sum_probs=54.0
Q ss_pred eeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccC-CceEEE--cc------CCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEND-GVHYRI--TE------SNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~-~~~~~~--~~------~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.+.|.|.+.| .|.| .+.|+|+|..+... ...... .. .++|.|.++..+|+|.|+|.|.|.....
T Consensus 124 ~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 124 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp HHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred hcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 347899999999988 6666 79999999988654 111111 11 1379999999999999999999987665
Q ss_pred eEE
Q psy10160 210 ENA 212 (558)
Q Consensus 210 ~~~ 212 (558)
...
T Consensus 204 ~~~ 206 (213)
T 3d9a_L 204 PIV 206 (213)
T ss_dssp CEE
T ss_pred ceE
Confidence 333
No 190
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.54 E-value=4.1e-15 Score=134.92 Aligned_cols=162 Identities=20% Similarity=0.211 Sum_probs=112.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC-CeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES-NRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.....++.+..+ .+|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 85 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGV 85 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSS
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCC
Confidence 5677777788888999999999999999999999999999998765556666554 469999999999999999999998
Q ss_pred cee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-hhhh
Q psy10160 207 TSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-ADKK 284 (558)
Q Consensus 207 G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~~~~ 284 (558)
|.. ...+.|.|..++ .+...+ .... +.. +......|.+.|.|.+.+.|++++....... ....
T Consensus 86 ~~~~~~~~~l~v~~~p---~~~~~~---~~~~------~~~---g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~ 150 (192)
T 2iep_A 86 GGAVESCGALQVKMKP---KITRPP---INVK------IIE---GLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVL 150 (192)
T ss_dssp SCCEEEEEEEEEEEEE---EEEECC---CCEE------EET---TSCEEECCEEEEESCCEEEEEETTEECCCCSSEEEC
T ss_pred CceeEeEEEEEEEeCC---ccccCC---cceE------EeC---CCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEe
Confidence 884 566777776443 111111 1111 122 2233356666689999999999876544332 2222
Q ss_pred hcccccchhhhhhhHHHhhc
Q psy10160 285 RRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 285 ~~grth~q~a~~~t~g~~~~ 304 (558)
..+...+..+.....|.|..
T Consensus 151 ~~~~L~i~~~~~~d~G~Y~C 170 (192)
T 2iep_A 151 ESGSLRIHNVQKEDAGQYRC 170 (192)
T ss_dssp TTSCEEESSCCGGGCEEEEE
T ss_pred cCCcEEEecCChhhCEEEEE
Confidence 33445555555555555543
No 191
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.54 E-value=4.1e-14 Score=130.84 Aligned_cols=73 Identities=16% Similarity=0.292 Sum_probs=54.4
Q ss_pred eeCCCcEEEEeEeecc----CCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee--eEEEE
Q psy10160 141 FGVGSDISIPCDVDGY----PIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD--ENAVT 214 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~----P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~--~~~~~ 214 (558)
+.+|+.++|.|.+.|. |.|.+.|++++...... . ....+.|.|..+..+|+|.|+|.|.|..+.. +..+.
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~--~--~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP--E--TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS--S--CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC--C--ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 5689999999999874 89999999998654321 1 1355689999999999999999999987554 45555
Q ss_pred EEE
Q psy10160 215 IRV 217 (558)
Q Consensus 215 l~V 217 (558)
|.|
T Consensus 211 l~V 213 (214)
T 2zg1_A 211 LNV 213 (214)
T ss_dssp CCC
T ss_pred EEe
Confidence 544
No 192
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.54 E-value=1.5e-14 Score=136.65 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=60.7
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC---ceeeEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY---TSDENAVTI 215 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~---G~~~~~~~l 215 (558)
..+.+|+.++|.|.+.+. .+.+.|+|+|..+... ......+++|.|.+++.+|+|.|+|.+.|.. ...+..+.|
T Consensus 111 ~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~--~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l 187 (242)
T 1p6f_A 111 PEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHVQ--RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL 187 (242)
T ss_dssp SEEETTCEEEEEEECTTS-CSEEEEEECSSSCEEE--EEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEE
T ss_pred CccCCCCcEEEEEecCCC-CCEEEEEECCCccCcc--ccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEE
Confidence 457899999999999875 4689999998766431 1112334689999999999999999999974 234677889
Q ss_pred EEeccCCCCCCC
Q psy10160 216 RVEGIFIHPSCR 227 (558)
Q Consensus 216 ~V~~~~~~p~~~ 227 (558)
.|.+++..|...
T Consensus 188 ~V~~~~~~P~l~ 199 (242)
T 1p6f_A 188 LVTGDIENTSLA 199 (242)
T ss_dssp EEEC--------
T ss_pred EEeccCCCCccc
Confidence 998766555443
No 193
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=1.4e-14 Score=116.41 Aligned_cols=89 Identities=18% Similarity=0.316 Sum_probs=76.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.|+.|...+.+..+.+|+.+.|.|.+ .|.|.+.|+|+|..+..++ ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~-r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESD-RLKVVQKGRIHKLVIANALTEDEGDYVFAPDA 82 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCS-SEEEEECSSEEEEEESSCCGGGCSEEEEEESS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCC-cEEEEEeCCEEEEEECCCChhhCEEEEEEEcC
Confidence 46777788889999999999999999 8999999999999997654 66655544 799999999999999999999
Q ss_pred CCceeeEEEEEEEeccC
Q psy10160 205 SYTSDENAVTIRVEGIF 221 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~ 221 (558)
. ..+.++.|.|.++|
T Consensus 83 ~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 83 Y--NVTLPAKVHVISGP 97 (100)
T ss_dssp S--CCCEEEEEEEECCS
T ss_pred C--CeeEEEEEEEeCCC
Confidence 8 56678888887654
No 194
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=1.7e-14 Score=137.85 Aligned_cols=86 Identities=14% Similarity=0.225 Sum_probs=61.3
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEE--CCEEec-----------cCCceEEEcc---CCeEEEccCCCCCCeEE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYK--DGQVIE-----------NDGVHYRITE---SNRLHINQANATDSGEY 198 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--~g~~l~-----------~~~~~~~~~~---~~sL~I~~v~~~D~G~Y 198 (558)
.+....+.+|+.++|.|.+.+.|.|.+.|+| ++..+. ....++.+.. ..+|.|.+++.+|+|.|
T Consensus 145 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 224 (257)
T 1f3r_B 145 SPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATY 224 (257)
T ss_dssp ETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEE
T ss_pred cCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEE
Confidence 4455668899999999999999999999999 554331 0123454332 23799999999999999
Q ss_pred EEEEEeCCceeeEEEEEEEecc
Q psy10160 199 RCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
+|.|.|..........|.|.+.
T Consensus 225 ~C~a~n~~~~~g~gt~l~V~~~ 246 (257)
T 1f3r_B 225 FCYQYNNGYTFGAGTKLELKAA 246 (257)
T ss_dssp EEEEESSSEEECCCCEECCSSS
T ss_pred EEEEeCCCCeECCCEEEEEeCC
Confidence 9999997521223445666543
No 195
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.54 E-value=2.3e-14 Score=130.14 Aligned_cols=138 Identities=19% Similarity=0.303 Sum_probs=102.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC---ceEEEcc-CCeEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG---VHYRITE-SNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~---~~~~~~~-~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... .++.... ..+|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 47788888888999999999999999999999999999998886542 1222222 2479999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
|..|.....+.|.|.....+|.+...+. .. .+.. +......|.+.|.|+|.+.|++++....
T Consensus 84 n~~~~~~~~~~l~v~~~~~~p~~~~~~~---~~------~~~~---g~~~~l~C~~~g~p~~~v~W~~~~~~~~ 145 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETAPPNFVQRLQ---SM------TVRQ---GSQVRLQVRVTGIPTPVVKFYRDGAEIQ 145 (194)
T ss_dssp ETTEEEEEEEEEEEECCCEEEEEEECCC---CE------EECT---TEEEEEEEEEEEESCCEEEEEETTEECC
T ss_pred cCCceEeEEEEEEEccCCCCCEEEeCCc---cE------EEcC---CCEEEEEEEEEEecCCeEEEEECCEECC
Confidence 9999998888898875443333322110 01 1122 3344455666689999999999876543
No 196
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.53 E-value=6.8e-14 Score=124.30 Aligned_cols=141 Identities=20% Similarity=0.214 Sum_probs=98.1
Q ss_pred cccC-ceeEEeccCCCC-CCcEEEEeCCcccCCCCce---------eeccccceeeceeEEeeccceeeEEeeeceeeeC
Q psy10160 61 IDYG-TILSSAFPSESA-SPVVTQTTTTTTEATSPHV---------YAALTHCVPWSNVCLFGARSGYLKETQNGGYLVP 129 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p-~p~v~W~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 129 (558)
+..| .+.+.|...+.| .+.+.|++++..+...... ..|.|.|.+.+ ..... ...+.+..+
T Consensus 16 v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~-------~~~s~--~~~l~v~~~ 86 (170)
T 3ry4_A 16 VLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQ-------TSLSD--PVHLTVLFE 86 (170)
T ss_dssp EETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCSSEEEEECCGGGCEEEEEEETT-------SBCCC--CEEEEEECC
T ss_pred EECCCcEEEEEEecCCCCcceEEEEECCeEcccCccceEEEecccccCeEEEEEEeC-------CCceE--eEEEEEECC
Confidence 4445 556889888886 6799999998777654322 25666666553 21111 112222334
Q ss_pred cEEEecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+.+.. +....+.+|+.+.|.|.+ .+.|.|.+.|+++|..+... ..++.|.|.+++.+|+|.|+|.|.|..|.
T Consensus 87 ~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 87 WLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFS------HLDPTFSIPQANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp SEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEEE------SSCCEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcccc------CCCCeEEEEeccccCCEEEEEEEEeCcCc
Confidence 43333 335567899999999999 45677899999999887532 24568999999999999999999999997
Q ss_pred -eeEEEEEEE
Q psy10160 209 -DENAVTIRV 217 (558)
Q Consensus 209 -~~~~~~l~V 217 (558)
.+..+.|.|
T Consensus 160 ~~s~~~~l~V 169 (170)
T 3ry4_A 160 FSSKPVTITV 169 (170)
T ss_dssp EECCCEEEEE
T ss_pred cccccEEEEE
Confidence 456667766
No 197
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.53 E-value=8.6e-14 Score=111.22 Aligned_cols=87 Identities=29% Similarity=0.512 Sum_probs=74.6
Q ss_pred EEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECCEEeccCCceEEE-ccCC--eEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDGQVIENDGVHYRI-TESN--RLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~-~~~~--sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
+...+....+.+|+.+.|.|.+.|. |.|.+.|+|++..+..+. ++.+ ..++ +|.|.+++.+|+|.|+|.|.|..|
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSE-KYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCC-CEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 3455678889999999999999997 999999999999887654 4444 2344 899999999999999999999999
Q ss_pred eeeEEEEEEEec
Q psy10160 208 SDENAVTIRVEG 219 (558)
Q Consensus 208 ~~~~~~~l~V~~ 219 (558)
.....+.|.|.+
T Consensus 83 ~~~~~~~l~V~~ 94 (97)
T 2bk8_A 83 EDSSYAELFVKG 94 (97)
T ss_dssp EEEEEEEEEETT
T ss_pred eEeEEEEEEEEe
Confidence 999999999864
No 198
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.53 E-value=6.7e-14 Score=125.83 Aligned_cols=61 Identities=13% Similarity=0.358 Sum_probs=48.3
Q ss_pred CcEEEEeEe-eccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEE
Q psy10160 145 SDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTI 215 (558)
Q Consensus 145 ~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 215 (558)
+.+.|.|.+ .| |.|.+.|++++..+.. ..+.+|.+.. .+|+|.|+|.|.|..|.......+
T Consensus 116 ~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-------~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 116 SNATLTCEVLEG-TDVELKLYQGKEHLRS-------LRQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp GGTEEEEECSSC-TTCEEEEEETTEEEEE-------ESSSEEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred CCEEEEEEeCCC-CCCEEEEEECCeECcC-------CCCCEEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 458999999 66 9999999999988751 2345677633 789999999999999988765443
No 199
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.53 E-value=6.1e-14 Score=124.98 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=84.6
Q ss_pred cCCceEe--cCCeEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEE
Q psy10160 5 RSENYEL--NKNMLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQ 82 (558)
Q Consensus 5 ~~~r~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W 82 (558)
+.+|+.+ .+++|.|.+++.+|+|.|+|.+.|..| ...+.|.|..++.. |.+.+
T Consensus 49 ~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~-~~~~~L~V~~~~~~------------------------p~i~~ 103 (171)
T 1ccz_A 49 FKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD-TMKFFLYVLEMVSK------------------------PMIYW 103 (171)
T ss_dssp GTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS-CEEEEEEEECCCCC------------------------CEEEE
T ss_pred cCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC-cEEEEEEEECcCCC------------------------CEEEE
Confidence 3456665 678999999999999999999999887 44556666543211 11111
Q ss_pred EeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEE
Q psy10160 83 TTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVF 162 (558)
Q Consensus 83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~ 162 (558)
.... ..|.|.+.|.|.|.+.
T Consensus 104 ----------------------------------------------------~~~~--------~~L~C~~~~~p~p~i~ 123 (171)
T 1ccz_A 104 ----------------------------------------------------ECSN--------ATLTCEVLEGTDVELK 123 (171)
T ss_dssp ----------------------------------------------------ETTT--------TEEEEECSSCSSCEEE
T ss_pred ----------------------------------------------------ecCC--------cEEEEEeCCCCCcEEE
Confidence 1110 2799999999999999
Q ss_pred EEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 163 WYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 163 W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
|++++..+... ....|.+. ..+|+|.|+|.|.|..|..+..+.|.
T Consensus 124 W~~~~~~l~~~-------~~~~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 124 LYQGKEHLRSL-------RQKTMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp EEETTEEEEEE-------SSSEEEEE--CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEECCEECcCC-------cceEEEEe--ccCCCceEEEEEEcccCcccceeEEe
Confidence 99999887632 22344444 37899999999999999987766553
No 200
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.53 E-value=4e-14 Score=130.80 Aligned_cols=72 Identities=13% Similarity=0.193 Sum_probs=53.3
Q ss_pred eeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCc--eEEEccC------CeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 141 FGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGV--HYRITES------NRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~--~~~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
+..|+.+.|.|.+.|.|+| .+.|+|+|..+..+.. ......+ ..|.|.++..+|+|.|+|.|.|......
T Consensus 127 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (212)
T 1q0x_L 127 ELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSN 206 (212)
T ss_dssp HHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEE
T ss_pred HccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCccee
Confidence 4578999999999986544 7999999998865311 0111222 2588999999999999999999876644
Q ss_pred EE
Q psy10160 211 NA 212 (558)
Q Consensus 211 ~~ 212 (558)
.+
T Consensus 207 ~~ 208 (212)
T 1q0x_L 207 KT 208 (212)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 201
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.53 E-value=2.1e-14 Score=130.15 Aligned_cols=161 Identities=17% Similarity=0.251 Sum_probs=111.0
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC-CCeEEEEE-CCEEeccCCceEEEc----cCCeEEEccCCCCCCeEEEEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP-IPQVFWYK-DGQVIENDGVHYRIT----ESNRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-~p~i~W~~-~g~~l~~~~~~~~~~----~~~sL~I~~v~~~D~G~Y~C~a 202 (558)
|+.+...+.+..+.+|+.+.|.|.+.+.| .|.+.|++ ++..+.....++.+. .+++|.|.+++.+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 56677788899999999999999999987 78999999 888887554455553 3458999999999999999999
Q ss_pred EeCC-ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-
Q psy10160 203 SNSY-TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA- 280 (558)
Q Consensus 203 ~N~~-G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~- 280 (558)
.|.. +..+..+.|.|..++ .+...+. . ..+.. +......|.+.|.|+|.+.|++++.......
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p---~~~~~~~---~------~~~~~---g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~ 146 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKL---MFKNAPT---P------QEFKE---GEDAVIVCDVVSSLPPTIIWKHKGRDVILKKD 146 (191)
T ss_dssp EETTTEEEEEEEEEEEECCS---EEEECCS---S------EECCT---TSCEEECCEEECSSCCEEEEEETTEEGGGGCC
T ss_pred EcCCCcceEEEEEEEeecCc---eEecCCC---c------EeecC---CCeEEEEEEECCCCCCEEEEEECCEEeeccCC
Confidence 9998 555677888885432 2221110 0 01122 3334466777789999999999976654322
Q ss_pred h--hhhhcccccchhhhhhhHHHhhc
Q psy10160 281 A--DKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 281 ~--~~~~~grth~q~a~~~t~g~~~~ 304 (558)
. .....+...+..+.....|.|..
T Consensus 147 ~~~~~~~~~~L~i~~~~~~d~G~Y~C 172 (191)
T 1epf_A 147 VRFIVLSNNYLQIRGIKKTDEGTYRC 172 (191)
T ss_dssp TTEEECTTSCEEETTCCGGGCEEEEE
T ss_pred ceEEEecCCeEEECCCChhhCEEEEE
Confidence 1 11223345555666666665544
No 202
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.52 E-value=4e-14 Score=112.07 Aligned_cols=86 Identities=20% Similarity=0.254 Sum_probs=71.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.|+.|...+.+..+.+|+.+.|.|.+.+ |.|.+.|+|+|..+..++ ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~-~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASP-DCEIIEDGKKHILILHNCQLGMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBT-TEEEEEETTEEEEEECSCCGGGCEEEEEEETT
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCC-CEEEEEECCEEEEEECCCChhhCEEEEEEECC
Confidence 4677888888999999999999999987 558899999999997654 55555443 799999999999999999988
Q ss_pred CCceeeEEEEEEEec
Q psy10160 205 SYTSDENAVTIRVEG 219 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~ 219 (558)
. ..++.|.|.+
T Consensus 82 ~----~~sa~L~V~~ 92 (93)
T 1waa_A 82 T----KSAANLKVKE 92 (93)
T ss_dssp E----EEEEEEEEEC
T ss_pred C----cEEEEEEEEc
Confidence 4 3566777754
No 203
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=1.4e-14 Score=123.60 Aligned_cols=83 Identities=22% Similarity=0.400 Sum_probs=69.8
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEECC----------------------------EEeccCCceEEEccC---Ce
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKDG----------------------------QVIENDGVHYRITES---NR 184 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g----------------------------~~l~~~~~~~~~~~~---~s 184 (558)
+....+.+|+.+.|.|.+.|.|.|.|.|+|++ ..+.....++.+..+ .+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 56778899999999999999999999999998 444333335544433 36
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 185 LHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 185 L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|.|.+++.+|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999999999999884
No 204
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.52 E-value=2.4e-14 Score=132.13 Aligned_cols=69 Identities=17% Similarity=0.275 Sum_probs=51.7
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC-CceEE--EccC------CeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND-GVHYR--ITES------NRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~-~~~~~--~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.+.|.|.+.|. |.| .+.|+|+|..+... ..... ...+ ++|.|.++..+|+|.|+|.|.|.....
T Consensus 123 ~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 123 QLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp HHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred hccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 3479999999999984 554 79999999987654 11111 1112 269999999999999999999987644
No 205
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.52 E-value=3.7e-14 Score=131.04 Aligned_cols=72 Identities=21% Similarity=0.356 Sum_probs=54.0
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeec-cCCCeEEEEECCEEeccCC-----------ceEEEccCCeEEEccCCCCCCeE
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDG-YPIPQVFWYKDGQVIENDG-----------VHYRITESNRLHINQANATDSGE 197 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g~~l~~~~-----------~~~~~~~~~sL~I~~v~~~D~G~ 197 (558)
|.+...+....+.+|+.++|.|.+.| .|.|.+.|+|+|..+.... ..|.. .++|.|.++..+|+|.
T Consensus 115 p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~ 192 (213)
T 3nl4_L 115 PTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNL--SSTLTLTSTEYNSHKE 192 (213)
T ss_dssp CEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEE--EEEEEEEHHHHHTCCE
T ss_pred CeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEE--EEEEEecHHHcCCCCe
Confidence 33333333444567999999999999 8999999999999876421 12221 2469999999999999
Q ss_pred EEEEEE
Q psy10160 198 YRCVAS 203 (558)
Q Consensus 198 Y~C~a~ 203 (558)
|+|.|.
T Consensus 193 Y~C~a~ 198 (213)
T 3nl4_L 193 YTCKVT 198 (213)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999999
No 206
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.52 E-value=5.3e-14 Score=113.81 Aligned_cols=80 Identities=23% Similarity=0.496 Sum_probs=66.8
Q ss_pred eCCCcEEEEeEeeccCCCeEEEEECCEEeccCCce-E--EEcc----CCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 142 GVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVH-Y--RITE----SNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~-~--~~~~----~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
..|+.+.|.|.+.|+|.|.+.|+|+|..+..+... . .... .++|.|.+++.+|+|.|+|.|.|..|..+.++.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 45788999999999999999999999998875421 1 1112 234999999999999999999999999999999
Q ss_pred EEEeccC
Q psy10160 215 IRVEGIF 221 (558)
Q Consensus 215 l~V~~~~ 221 (558)
|.|.++|
T Consensus 94 l~V~~~P 100 (103)
T 1wwb_X 94 AHFMGWP 100 (103)
T ss_dssp ECCSCCC
T ss_pred EEECCCC
Confidence 9997654
No 207
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.52 E-value=9.9e-14 Score=131.57 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=49.1
Q ss_pred eeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccC-----C---ceEEEcc------CCeEEEccCCCCCCeEEEEEEEe
Q psy10160 141 FGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEND-----G---VHYRITE------SNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 141 v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~-----~---~~~~~~~------~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
+..|+.+.|.|.+.| +|.| .+.|++++..+... . ....... ...|.|.....+|.|.|+|.|.|
T Consensus 130 ~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n 209 (248)
T 3pv7_A 130 GMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRH 209 (248)
T ss_dssp ------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEEC
T ss_pred cccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEEC
Confidence 345777889999999 8999 99999998643211 0 0111111 13688889999999999999999
Q ss_pred CCcee--eEEEEEEEec
Q psy10160 205 SYTSD--ENAVTIRVEG 219 (558)
Q Consensus 205 ~~G~~--~~~~~l~V~~ 219 (558)
..+.. ...+.|.|..
T Consensus 210 ~~~~~~~~~~v~l~V~~ 226 (248)
T 3pv7_A 210 ASLHTPLRSNFTLTAAR 226 (248)
T ss_dssp TTCSSCEEEEECC----
T ss_pred CCCCCCcEEEEEEEEcC
Confidence 98874 5667777743
No 208
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.52 E-value=9.6e-15 Score=118.94 Aligned_cols=90 Identities=26% Similarity=0.529 Sum_probs=78.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc---CCeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE---SNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.++.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++.+.. +++|.|.+++.+|+|.|+|.|.|
T Consensus 13 ~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSA-RHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp CCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCS-SEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCC-CEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 46778888889999999999999999999999999999998887644 554443 35899999999999999999999
Q ss_pred CCceeeEEEEEEEe
Q psy10160 205 SYTSDENAVTIRVE 218 (558)
Q Consensus 205 ~~G~~~~~~~l~V~ 218 (558)
..|..+..+.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99999999999884
No 209
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.52 E-value=8.2e-14 Score=137.32 Aligned_cols=204 Identities=15% Similarity=0.098 Sum_probs=122.7
Q ss_pred CCCCccccC-ceeEEeccCCCCCCcEEEEeCCcccCCC---------------CceeeccccceeeceeEEe--ecccee
Q psy10160 56 ADPNAIDYG-TILSSAFPSESASPVVTQTTTTTTEATS---------------PHVYAALTHCVPWSNVCLF--GARSGY 117 (558)
Q Consensus 56 ~~~~~v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~~---------------~~~~~g~~~~~~~~~~~~~--~~~~~~ 117 (558)
.+...+..| .+.+.|...+. .+.+.|++++..+... .....|.|.|.+.+..... ......
T Consensus 30 ~p~~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~ 108 (316)
T 3vh8_G 30 WPSAVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNP 108 (316)
T ss_dssp ESCSEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCC
T ss_pred cCCCccCCCCCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCc
Confidence 333345455 56688888777 7899999998765431 1112566776654321100 011111
Q ss_pred eEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEE---ccCCeEEEccCCCCC
Q psy10160 118 LKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRI---TESNRLHINQANATD 194 (558)
Q Consensus 118 ~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~---~~~~sL~I~~v~~~D 194 (558)
+....... ..+|.+...+... +.+|+.++|.|.+.+ |.+.+.|+|++..+......... ..++.|.|.+++.+|
T Consensus 109 ~~l~V~~~-~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D 185 (316)
T 3vh8_G 109 VVIMVTGN-HRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLAL 185 (316)
T ss_dssp EEEEEECS-SCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGG
T ss_pred EEEEEecC-CCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhh
Confidence 22211111 1245555555544 789999999999954 66789999999876432111111 123579999999999
Q ss_pred CeEEEEEEEeCCcee-----eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccc
Q psy10160 195 SGEYRCVASNSYTSD-----ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPH 269 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~-----~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w 269 (558)
+|.|+|.|.|..|.. +..+.|.|.+.+.+|.+...+ ...+..|....+.|. +. .+.+.+.|
T Consensus 186 ~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~----------~~~v~~G~~v~L~C~---~~-~~~~~~~W 251 (316)
T 3vh8_G 186 AGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQP----------GPKVQAGESVTLSCS---SR-SSYDMYHL 251 (316)
T ss_dssp CEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEES----------CSCCCTTSCCEEEEE---ES-SCCSEEEE
T ss_pred CceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCC----------CCeecCCCcEEEEEE---CC-CCCcEEEE
Confidence 999999999998742 566778887654444332211 112233444555554 42 57788999
Q ss_pred cchhhhhh
Q psy10160 270 IKRAVEAE 277 (558)
Q Consensus 270 ~~~~l~~~ 277 (558)
++++....
T Consensus 252 ~k~g~~~~ 259 (316)
T 3vh8_G 252 SREGGAHE 259 (316)
T ss_dssp EETTSSCC
T ss_pred EECCCcCC
Confidence 99976543
No 210
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.52 E-value=4.8e-14 Score=117.05 Aligned_cols=99 Identities=20% Similarity=0.329 Sum_probs=77.0
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeecc---CCCeEEEEECCE-Eec-cCCceEEEcc---------CCeEEEccCCCCCC
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGY---PIPQVFWYKDGQ-VIE-NDGVHYRITE---------SNRLHINQANATDS 195 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~---P~p~i~W~~~g~-~l~-~~~~~~~~~~---------~~sL~I~~v~~~D~ 195 (558)
+.|...|.+..+.+|+.++|.|.+.|. |.|.|.|+|+.. .+. ..+.++.+.. +.+|.|.+++.+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456677888999999999999999875 899999999641 111 1122343321 35799999999999
Q ss_pred eEEEEEEEeCCceeeEEEEEEEec-cCCCCCCCC
Q psy10160 196 GEYRCVASNSYTSDENAVTIRVEG-IFIHPSCRD 228 (558)
Q Consensus 196 G~Y~C~a~N~~G~~~~~~~l~V~~-~~~~p~~~~ 228 (558)
|.|+|+|.|..|..+..+.|.|.. ++..|.+..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~~i 121 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDS 121 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEECCCCSCCCCCC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEecCCCCCeEEe
Confidence 999999999999999999999987 665555443
No 211
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=6.4e-14 Score=135.75 Aligned_cols=91 Identities=15% Similarity=0.312 Sum_probs=64.1
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE--CCEEec-----------cCCceEEEc---cCCeEEEccCCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK--DGQVIE-----------NDGVHYRIT---ESNRLHINQANA 192 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--~g~~l~-----------~~~~~~~~~---~~~sL~I~~v~~ 192 (558)
++.+...+....+.+|+.++|.|.+.+.| |.+.|+| ++..+. ....++... ...+|.|.+++.
T Consensus 162 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 240 (282)
T 1qok_A 162 ENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEA 240 (282)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCCh
Confidence 33444456667789999999999999999 9999999 554431 012355433 234799999999
Q ss_pred CCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 193 TDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
+|+|.|+|.|.|..+.. .....|.|.+.
T Consensus 241 ~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 269 (282)
T 1qok_A 241 EDAATYYCQQRSSYPLTFGAGTKLELKRA 269 (282)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred hHCEEEEEEEeeCCCceEeCCEEEEEecc
Confidence 99999999999864432 34456777543
No 212
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.51 E-value=6.9e-14 Score=129.65 Aligned_cols=69 Identities=17% Similarity=0.311 Sum_probs=51.7
Q ss_pred eCCCcEEEEeEeec-cCCC-eEEEEECCEEeccC-CceEEE--ccC------CeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 142 GVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEND-GVHYRI--TES------NRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 142 ~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~-~~~~~~--~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
..|+.+.|.|.+.| .|.| .|.|+|+|..+... ...... ..+ +.|.|.++..+|+|.|+|.|.|......
T Consensus 127 ~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 127 LKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred ccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 36889999999998 5555 89999999987653 111111 112 2689999999999999999999876544
No 213
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.51 E-value=2.9e-14 Score=132.81 Aligned_cols=72 Identities=19% Similarity=0.334 Sum_probs=54.8
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC-------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND-------GVHYRITESNRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~-------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
+.+|+.+.|.|.+.|. |.| .+.|+++|..+... +..|.. .+.|.|.++..+| |.|+|.|.|..|....
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~ 215 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL--SSSVTVPSSTWPS-ETVTCNVAHPASSTKV 215 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEE--EEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCCCcEEEEEEEccEECCCCEEEEecCCeEcceEeccccccCCcEEE--EEEEEECchhcCC-CeEEEEEEccCCCCcE
Confidence 5679999999999996 988 99999998765321 011211 2368999999999 9999999999987655
Q ss_pred EEEE
Q psy10160 212 AVTI 215 (558)
Q Consensus 212 ~~~l 215 (558)
...+
T Consensus 216 ~~~i 219 (222)
T 1q9r_B 216 DKKI 219 (222)
T ss_dssp EEEC
T ss_pred EEec
Confidence 4443
No 214
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.51 E-value=8.7e-14 Score=132.76 Aligned_cols=84 Identities=19% Similarity=0.311 Sum_probs=60.5
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCC-----eEEEEE--CCEEec-----------cCCceEEEcc---CCeEEEccCCCC
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIP-----QVFWYK--DGQVIE-----------NDGVHYRITE---SNRLHINQANAT 193 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p-----~i~W~~--~g~~l~-----------~~~~~~~~~~---~~sL~I~~v~~~ 193 (558)
.+....+.+|+.++|.|.+.+.|.| .+.|+| ++..+. ....++.... ..+|.|.+++.+
T Consensus 127 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 206 (256)
T 1nqb_A 127 TPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAE 206 (256)
T ss_dssp ECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred cCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChH
Confidence 4455678899999999999999876 899999 554331 0123444322 247999999999
Q ss_pred CCeEEEEEEEeCCcee-eEEEEEEEe
Q psy10160 194 DSGEYRCVASNSYTSD-ENAVTIRVE 218 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~-~~~~~l~V~ 218 (558)
|+|.|+|.|.|..+.. .....|.|.
T Consensus 207 DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 207 DLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred HCEEEEEEEccCCceEECCCEEEEEE
Confidence 9999999999864433 234567774
No 215
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.51 E-value=3.3e-14 Score=131.28 Aligned_cols=85 Identities=12% Similarity=0.170 Sum_probs=59.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC--CCeEEEEECCEEeccCCc--eEEEccC------CeEEEccCCCCCCeEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDGQVIENDGV--HYRITES------NRLHINQANATDSGEY 198 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g~~l~~~~~--~~~~~~~------~sL~I~~v~~~D~G~Y 198 (558)
+|.+...+....+.+|+.+.|.|.+.|.| .|.+.|+|+|..+..... ......+ ..|.|.++..+|+|.|
T Consensus 111 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y 190 (211)
T 3tv3_L 111 APSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSY 190 (211)
T ss_dssp CCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCE
T ss_pred CCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeE
Confidence 34444444444445799999999999963 578999999998864210 0111111 3589999999999999
Q ss_pred EEEEEeCCceeeEEE
Q psy10160 199 RCVASNSYTSDENAV 213 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~ 213 (558)
+|.|.|..+....++
T Consensus 191 ~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 191 SCQVTHEGSTVEKTV 205 (211)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEEECCCCEEeec
Confidence 999999987766554
No 216
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.50 E-value=1e-13 Score=111.44 Aligned_cols=89 Identities=21% Similarity=0.458 Sum_probs=72.6
Q ss_pred CcEEEecC----CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc--eEEE-ccCCeEEEccCCCCCCeEEEEE
Q psy10160 129 PVKVNITL----ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV--HYRI-TESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 129 p~~~~~~~----~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~--~~~~-~~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
||.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..... .+.. ..+++|.|.+++.+|+|.|+|.
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 83 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 83 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEE
Confidence 55555433 456788999999999999999999999999998865421 1222 3345899999999999999999
Q ss_pred EEeCCceeeEEEEEEE
Q psy10160 202 ASNSYTSDENAVTIRV 217 (558)
Q Consensus 202 a~N~~G~~~~~~~l~V 217 (558)
|.|..|.....+.|.|
T Consensus 84 a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 84 VENEYGSINHTYHLDV 99 (100)
T ss_dssp EEETTEEEEEEEEEEE
T ss_pred EEeCCCEEEEEEEEEE
Confidence 9999999998888887
No 217
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.50 E-value=3e-14 Score=132.44 Aligned_cols=73 Identities=19% Similarity=0.302 Sum_probs=51.8
Q ss_pred EeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccC--C-----ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 140 VFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEND--G-----VHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~--~-----~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+|+.+.|.|.+.| +|.| .|.|++++..+... . ..|. ..+.|.|... ..|.|.|+|.|.|..|...
T Consensus 135 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~--~~s~L~i~~~-~~d~g~Y~C~a~n~~~~~~ 211 (219)
T 1c1e_H 135 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVPSS-PRPSETVTCNVAHPASSTK 211 (219)
T ss_dssp SSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEE--EEEEEEEESS-STTTSCCEEEEEEGGGTEE
T ss_pred ccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEE--EEEEEEEecc-cCCCCEEEEEEEeCCCCcc
Confidence 3568999999999999 8999 99999998764211 1 1111 1136888444 4466999999999988765
Q ss_pred EEEEE
Q psy10160 211 NAVTI 215 (558)
Q Consensus 211 ~~~~l 215 (558)
....+
T Consensus 212 ~~~~i 216 (219)
T 1c1e_H 212 VDKKI 216 (219)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 54443
No 218
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.50 E-value=8.1e-14 Score=144.32 Aligned_cols=192 Identities=12% Similarity=0.141 Sum_probs=114.2
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEE----------------e--CCCCccCCCCc---ccc-CceeEEe
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQ----------------A--LPSEKVADPNA---IDY-GTILSSA 70 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~----------------~--~p~~~~~~~~~---v~~-~~~~~~~ 70 (558)
+.|.|.+++.+| |.|+|.|.|..|... ...+.+. . .|.....+|.. +.. ..+.+.|
T Consensus 184 s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C 262 (444)
T 1igt_B 184 SSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTC 262 (444)
T ss_dssp EEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEE
T ss_pred EEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEE
Confidence 569999999999 999999999988752 3333221 0 12111223322 233 4567889
Q ss_pred ccCCCC----CCcEEEEeCCcccCCCCcee-----eccc---ccee---------eceeEEeeccceee--EEeeec--e
Q psy10160 71 FPSESA----SPVVTQTTTTTTEATSPHVY-----AALT---HCVP---------WSNVCLFGARSGYL--KETQNG--G 125 (558)
Q Consensus 71 ~~~~~p----~p~v~W~~~~~~~~~~~~~~-----~g~~---~~~~---------~~~~~~~~~~~~~~--~~~~~~--~ 125 (558)
.+.+.+ .+.++|++++..+....... .+.+ ..+. -.|.|.+.+..+.. ...... .
T Consensus 263 ~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~ 342 (444)
T 1igt_B 263 VVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKG 342 (444)
T ss_dssp EEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCC
T ss_pred EEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCC
Confidence 888874 36899999987664322110 0100 0111 13566666665433 111111 3
Q ss_pred eeeCcEEEecCCceEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCe
Q psy10160 126 YLVPVKVNITLETQVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSG 196 (558)
Q Consensus 126 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G 196 (558)
+..+|.+...+.......++.++|.|.+.| +|.| .|.|+|+|..+.... .......++ .|.|.....+|.|
T Consensus 343 ~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g 422 (444)
T 1igt_B 343 SVRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERN 422 (444)
T ss_dssp CCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCC
T ss_pred CCCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCC
Confidence 446777665443322223445999999999 5666 899999998874311 111123334 3566666677899
Q ss_pred EEEEEEEeCC
Q psy10160 197 EYRCVASNSY 206 (558)
Q Consensus 197 ~Y~C~a~N~~ 206 (558)
.|+|.|.|..
T Consensus 423 ~YtC~a~n~~ 432 (444)
T 1igt_B 423 SYSCSVVHEG 432 (444)
T ss_dssp CEEEEEECTT
T ss_pred eEEEEEECCC
Confidence 9999999975
No 219
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.50 E-value=6e-14 Score=128.62 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=49.6
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc---cCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT---ESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~---~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
..+.+|+.++|.|.+.+ |.|.+.|+|+|..+.......... .+++|.|.+++ |+|.|+|.|.|..
T Consensus 117 ~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 117 PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 36789999999999987 668999999998765322111111 14579999998 9999999999763
No 220
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.50 E-value=8.8e-14 Score=115.36 Aligned_cols=80 Identities=21% Similarity=0.414 Sum_probs=67.6
Q ss_pred CCCcEEEEeEeeccCCCeEEEEECCEEeccCCceE-EEc--------cCCeEEEccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 143 VGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHY-RIT--------ESNRLHINQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 143 ~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~-~~~--------~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
.+..+.|.|.+.|+|.|.|+|+|||.++..+...+ ... ..++|.|.+++.+|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 67789999999999999999999999998755322 111 135799999999999999999999999999999
Q ss_pred EEEEeccCC
Q psy10160 214 TIRVEGIFI 222 (558)
Q Consensus 214 ~l~V~~~~~ 222 (558)
.|.|...|.
T Consensus 94 ~l~v~~~P~ 102 (126)
T 1he7_A 94 MAAFMDNPF 102 (126)
T ss_dssp EECCCSCTT
T ss_pred EEEEEcCCC
Confidence 999876553
No 221
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.50 E-value=1.1e-13 Score=129.30 Aligned_cols=134 Identities=19% Similarity=0.209 Sum_probs=97.2
Q ss_pred eCcEEEecC----CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc---eEEEccCCeEEEccCCCCCCeEEEE
Q psy10160 128 VPVKVNITL----ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV---HYRITESNRLHINQANATDSGEYRC 200 (558)
Q Consensus 128 ~p~~~~~~~----~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~sL~I~~v~~~D~G~Y~C 200 (558)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..... ......+.+|.|.+++.+|+|.|+|
T Consensus 14 ~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (231)
T 3ojm_B 14 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93 (231)
T ss_dssp EEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred cCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEE
Confidence 466665554 678899999999999999999999999999998865321 1223345689999999999999999
Q ss_pred EEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccc
Q psy10160 201 VASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIK 271 (558)
Q Consensus 201 ~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~ 271 (558)
.+.|..|.....+.|.|...+..+.......... ..+ .. +......|.+.+.|++.+.|++
T Consensus 94 ~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~-~~~------~~---g~~~~l~C~~~~~p~p~v~W~~ 154 (231)
T 3ojm_B 94 VVENEYGSINHTYHLDVVERSRHRPILQAGLPAN-AST------VV---GGDVEFVCKVYSDAQPHIQWIK 154 (231)
T ss_dssp EEEETTEEEEEEEEEEEECCCCCCCEECTTCSCC-EEE------ET---TCCEEEECCEECSSCCEEEEEE
T ss_pred EEecccCcccccEEEEEEcCCCCCCceeeccCCc-eEE------Ee---CCcEEEEEEEecCCCCEEEEEE
Confidence 9999999998899999976543222211111111 111 12 3334466777789999999999
No 222
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.50 E-value=2.2e-13 Score=142.42 Aligned_cols=192 Identities=13% Similarity=0.147 Sum_probs=114.5
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceEEEEEEEEe--------------------CCCCccCCCCc--cccC-ceeEEec
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAVSWTVTLQA--------------------LPSEKVADPNA--IDYG-TILSSAF 71 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~s~~l~V~~--------------------~p~~~~~~~~~--v~~~-~~~~~~~ 71 (558)
.|.|.++..+|+|.|+|.|.|..+...+..+.+.+ .|.....+|.. +..| .+.+.|.
T Consensus 191 ~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~ 270 (475)
T 1iga_A 191 QLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSLHRPALEDLLLGSEANLTCT 270 (475)
T ss_pred EEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEEcCCChHHhccCCceEEEEE
Confidence 58899999999999999999988754444444322 11111222221 2344 5668888
Q ss_pred cCCCCC---CcEEEEeCCcccCCCCc-----eeecccc---cee---------eceeEEeeccceeeEEeeec---eeee
Q psy10160 72 PSESAS---PVVTQTTTTTTEATSPH-----VYAALTH---CVP---------WSNVCLFGARSGYLKETQNG---GYLV 128 (558)
Q Consensus 72 ~~~~p~---p~v~W~~~~~~~~~~~~-----~~~g~~~---~~~---------~~~~~~~~~~~~~~~~~~~~---~~~~ 128 (558)
+.+.++ +.++| ++........ ...|.|. .+. -.|.|.+.+..+........ .+..
T Consensus 271 ~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~ 348 (475)
T 1iga_A 271 LTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTF 348 (475)
T ss_pred EEcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCC
Confidence 887644 68999 3333221100 0011110 011 13466666665433221111 2245
Q ss_pred CcEEEecCCc-eEeeCCCcEEEEeEeeccCC--CeEEEEECCEEeccCCc---eEEEc---cCC------eEEEccCCCC
Q psy10160 129 PVKVNITLET-QVFGVGSDISIPCDVDGYPI--PQVFWYKDGQVIENDGV---HYRIT---ESN------RLHINQANAT 193 (558)
Q Consensus 129 p~~~~~~~~~-~~v~~G~~v~L~C~~~g~P~--p~i~W~~~g~~l~~~~~---~~~~~---~~~------sL~I~~v~~~ 193 (558)
+|.+.+.+.. ..+.+|+.+.|.|.+.|.++ +.|.|+|+|..+..... ..... .++ .|.|.....+
T Consensus 349 ~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~ 428 (475)
T 1iga_A 349 RPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWK 428 (475)
T ss_pred CCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhc
Confidence 6766554433 34678999999999999643 48999999998865420 01112 222 4777777788
Q ss_pred CCeEEEEEEEeCCce
Q psy10160 194 DSGEYRCVASNSYTS 208 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~ 208 (558)
|.|.|+|.|.|....
T Consensus 429 ~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 429 KGDTFSCMVGHEALP 443 (475)
T ss_pred CCCEEEEEEEcCCCC
Confidence 999999999998654
No 223
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.50 E-value=5.3e-14 Score=130.49 Aligned_cols=82 Identities=13% Similarity=0.233 Sum_probs=56.3
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCCc---------eEEEccCCeEEEccCCCCCCeEE
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDGV---------HYRITESNRLHINQANATDSGEY 198 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~~---------~~~~~~~~sL~I~~v~~~D~G~Y 198 (558)
|.+...+....+..|+.+.|.|.+.| .|.| .+.|+|+|..+..... .+.+ ...|.|.....+|+|.|
T Consensus 122 P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~--~s~l~i~~~~~~d~g~Y 199 (218)
T 3s96_B 122 PTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMA--SSFLHLTSDQWRSHNSF 199 (218)
T ss_dssp CEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEE--EEEEEEEHHHHHTCSCE
T ss_pred ceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEE--EEEEEEeHHHccCCCeE
Confidence 33333333334456789999999998 5777 8999999998865211 1111 12488888888899999
Q ss_pred EEEEEeCCceeeEEE
Q psy10160 199 RCVASNSYTSDENAV 213 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~ 213 (558)
+|.|.|..+....++
T Consensus 200 ~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 200 TCQVTHEGDTVEKSL 214 (218)
T ss_dssp EEEEEETTEEEEEEE
T ss_pred EEEEEeCCCcccccc
Confidence 999999987766543
No 224
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.50 E-value=8e-14 Score=126.25 Aligned_cols=128 Identities=18% Similarity=0.344 Sum_probs=95.3
Q ss_pred CcEEEecCC--ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLE--TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~--~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
||.+...+. ...+.+|+.+.|.|.+.|.|.|.+.|++++..+.... ++.+. .+.+|.|.+++.+|+|.|+|.+.|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE-KYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSS-SEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCc-cEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 566665544 4567899999999999999999999999999987654 44443 4458999999999999999999999
Q ss_pred CceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchh
Q psy10160 206 YTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRA 273 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~ 273 (558)
.|.....+.|.|..++ ..... . ...+.. +......|.+.|.|++.+.|+++.
T Consensus 81 ~~~~~~~~~l~V~~~p---~~~~~---~-------~~~~~~---g~~v~l~C~~~~~p~~~v~W~~~~ 132 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQP---HIIQL---K-------NETTYE---NGQVTLVCDAEGEPIPEITWKRAV 132 (192)
T ss_dssp TEEEEEEEEEEEEEEE---EEEEE---C-------CEEECT---TSEEEEEEEEEEESCCEEEEEETT
T ss_pred ccccceEEEEEEEccC---ccccc---C-------cceEEe---CCeEEEEEEecCCCCCcEEEEeCC
Confidence 9999888888886543 11110 0 111122 333445556668999999999983
No 225
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.50 E-value=2.9e-14 Score=148.25 Aligned_cols=192 Identities=12% Similarity=0.126 Sum_probs=112.2
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEe-----------------CCCCccCCCCc---cc-cCceeEEecc
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQA-----------------LPSEKVADPNA---ID-YGTILSSAFP 72 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~-----------------~p~~~~~~~~~---v~-~~~~~~~~~~ 72 (558)
.|.|.+++.+| |.|+|.|.|..+... ...+.+.. .|.....+|.. +. +..+.+.|.+
T Consensus 195 ~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~ 273 (457)
T 1hzh_H 195 VVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVV 273 (457)
T ss_dssp EEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEE
T ss_pred EEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEE
Confidence 79999999999 999999999877642 33333221 11111222221 22 3456688988
Q ss_pred CCCCCC----cEEEEeCCcccCCCCce-----eeccccce------------eeceeEEeeccceeeEEe--ee--ceee
Q psy10160 73 SESASP----VVTQTTTTTTEATSPHV-----YAALTHCV------------PWSNVCLFGARSGYLKET--QN--GGYL 127 (558)
Q Consensus 73 ~~~p~p----~v~W~~~~~~~~~~~~~-----~~g~~~~~------------~~~~~~~~~~~~~~~~~~--~~--~~~~ 127 (558)
.+.|++ .++|++++..+...... ..|.+... .-.|.|.+.+........ .. ..+.
T Consensus 274 ~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~ 353 (457)
T 1hzh_H 274 VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQP 353 (457)
T ss_dssp ECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCC
T ss_pred EcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCC
Confidence 887553 89999998665432110 00111000 123456655443221111 11 1234
Q ss_pred eCcEEEecCCc-eEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCeE
Q psy10160 128 VPVKVNITLET-QVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSGE 197 (558)
Q Consensus 128 ~p~~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G~ 197 (558)
.+|.+...+.. ..+..|+ +.|.|.+.|.|+| .|.|+|+|..+.... .......++ .|.|.....+|.|.
T Consensus 354 ~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ 432 (457)
T 1hzh_H 354 REPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNV 432 (457)
T ss_dssp BCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCC
T ss_pred CCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCe
Confidence 56766654433 3344555 9999999997554 899999999885321 111223333 35566665678999
Q ss_pred EEEEEEeCCce
Q psy10160 198 YRCVASNSYTS 208 (558)
Q Consensus 198 Y~C~a~N~~G~ 208 (558)
|+|.|.|....
T Consensus 433 YtC~a~n~~l~ 443 (457)
T 1hzh_H 433 FSCSVMHEALH 443 (457)
T ss_dssp EEEEEECTTSG
T ss_pred EEEEEEECCCC
Confidence 99999997543
No 226
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.50 E-value=8.9e-14 Score=130.96 Aligned_cols=75 Identities=19% Similarity=0.329 Sum_probs=56.4
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCE-----Eec--------cCCceEEEcc-----CCeEEEccCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQ-----VIE--------NDGVHYRITE-----SNRLHINQANAT 193 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~-----~l~--------~~~~~~~~~~-----~~sL~I~~v~~~ 193 (558)
+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++. .+. ..+.++.+.. ..+|.|.+++.+
T Consensus 130 v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 209 (238)
T 2p1y_A 130 VRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPG 209 (238)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGG
T ss_pred EEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHH
Confidence 3344566778899999999999999999999999641 110 0122444431 247999999999
Q ss_pred CCeEEEEEEEeCC
Q psy10160 194 DSGEYRCVASNSY 206 (558)
Q Consensus 194 D~G~Y~C~a~N~~ 206 (558)
|+|.|+|.|.|..
T Consensus 210 D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 210 DSATYFCAAIDTN 222 (238)
T ss_dssp GCEEEEEEEEETT
T ss_pred HCEEEEEEEeeCC
Confidence 9999999999984
No 227
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.50 E-value=6.2e-14 Score=137.21 Aligned_cols=166 Identities=17% Similarity=0.165 Sum_probs=113.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc--cCC--eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT--ESN--RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~--~~~--sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..++.++.+. .++ +|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 47888888889999999999999999999999999999999987665555543 233 89999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCCCCCCCcccc-ceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh-h
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPSCRDLPLFAN-CKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA-A 281 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~-~ 281 (558)
|..|..+..+.|.|..++.. ...+.... ..+ .+..|.... ..|.+.|.|.+.+.|++++....... .
T Consensus 83 n~~g~~~~~~~l~V~~~p~~---~~~~~~~~~~~~-----~~~~g~~~~---l~C~~~g~p~p~i~W~~~~~~~~~~~~~ 151 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKI---HLPKTLEGMGAV-----HALRGEVVS---IKIPFSGKPDPVITWQKGQDLIDNNGHY 151 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEE---CCCHHHHSSCCE-----EEETTCCEE---EEEEEEEESCCEEEEEESSSBCCSSSSC
T ss_pred cCCCCccceEEEEEecCCcc---CCCccccccccE-----EecCCCEEE---EEEEECCCCCCEEEEEECCEECCCCCcE
Confidence 99999989999999654321 10000000 011 112223333 45555689999999999875543222 1
Q ss_pred hhh---hcccccchh-hhhhhHHHhhc
Q psy10160 282 DKK---RRSRRSLSV-VNKWSLRQAFT 304 (558)
Q Consensus 282 ~~~---~~grth~q~-a~~~t~g~~~~ 304 (558)
... ..+..++.. +.+.+.|.|..
T Consensus 152 ~~~~~~~~~~l~i~~~~~~~d~G~Y~C 178 (305)
T 2nzi_A 152 QVIVTRSFTSLVFPNGVERKDAGFYVV 178 (305)
T ss_dssp EEEECSSEEEEEETTCCCSTTCEEEEE
T ss_pred EEEEcCCceEEEEecCCccCccEEEEE
Confidence 111 122334444 55566665544
No 228
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.49 E-value=1.3e-13 Score=125.43 Aligned_cols=134 Identities=19% Similarity=0.266 Sum_probs=97.9
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEee-ccCCCeEEEEECCEEeccCCc-eEEE--cc--------CCeEEEccCCCCCCe
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGV-HYRI--TE--------SNRLHINQANATDSG 196 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~-~~~~--~~--------~~sL~I~~v~~~D~G 196 (558)
||.+...+....+.+|+.+.|.|.+. |.|.|.+.|+|++..+..... ++.+ .. +++|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 57778888999999999999999999 999999999999999876532 3332 22 357999999999999
Q ss_pred EEEEEEEeCCceee-EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-cccccchhh
Q psy10160 197 EYRCVASNSYTSDE-NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS-YGPHIKRAV 274 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~-~~~w~~~~l 274 (558)
.|+|.+.|..|... ..+.|.|..+ |.+...+. . ..+..|.... ..|.+.|.|.| .+.|++++.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~---p~~~~~~~---~------~~~~~g~~~~---l~C~~~g~p~p~~v~W~~~~~ 146 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL---PYFLEEPE---D------RTVAANTPFN---LSCQAQGPPEPVDLLWLQDAV 146 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS---CEEEECCC---C------EEECTTCCEE---EEEEEECSSCCCEEEEEESSC
T ss_pred EEEEEEEeCCCceecccEEEEEecC---CeEEcCCC---c------EEEcCCCEEE---EEeECCCCCCCCEEEEEECCE
Confidence 99999999988764 4478888543 32221111 1 1122233334 45556689999 899999976
Q ss_pred hhh
Q psy10160 275 EAE 277 (558)
Q Consensus 275 ~~~ 277 (558)
...
T Consensus 147 ~~~ 149 (195)
T 2c5d_C 147 PLA 149 (195)
T ss_dssp BSS
T ss_pred ecc
Confidence 544
No 229
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.49 E-value=4.9e-14 Score=134.27 Aligned_cols=117 Identities=12% Similarity=0.106 Sum_probs=58.9
Q ss_pred EeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc---cCCeEEEccCCCCCCeEEEEEEEeCCc-----eeeE
Q psy10160 140 VFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT---ESNRLHINQANATDSGEYRCVASNSYT-----SDEN 211 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~---~~~sL~I~~v~~~D~G~Y~C~a~N~~G-----~~~~ 211 (558)
.+.+|+.++|.|.+.+.| +.+.|+|+|..+.....+.... .+++|.|.+++ |+|.|+|.|.|... ..+.
T Consensus 117 ~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~ 193 (257)
T 1b6u_A 117 TVLAGESVTLSCSSRSSY-DMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSD 193 (257)
T ss_dssp TCBTTCEEEEEEECSSCC-SEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCC
T ss_pred ccCCCCEEEEEEeCCCCC-cEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCC
Confidence 568999999999998864 7899999998765432111111 24589999998 99999999998632 3356
Q ss_pred EEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhh
Q psy10160 212 AVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV 274 (558)
Q Consensus 212 ~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l 274 (558)
.+.|.|.+++... . |..... ...++..+...|.. |.+...+.|+.-++
T Consensus 194 pl~L~V~g~p~~~-~---p~~~~~----------~~~~g~~~~l~~~~-~~~~~~~~~~~~~~ 241 (257)
T 1b6u_A 194 PLLVSVTGNPSNS-W---PSPTEP----------SSETGNPRHLHAAA-EQKLISEEDLNLDL 241 (257)
T ss_dssp CEEECCBCCC-----------------------------------------------------
T ss_pred CEEEEEeccCCCC-C---CCCccc----------CccCCCeEEEEEEE-cchHHHHHHhhhhh
Confidence 6888887764211 0 100000 01123344455666 88888888877643
No 230
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.49 E-value=8.1e-14 Score=132.70 Aligned_cols=93 Identities=18% Similarity=0.282 Sum_probs=64.9
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCC----eEEEEEC--CEEec-----------cCCceEEEcc---CCeEEEc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIP----QVFWYKD--GQVIE-----------NDGVHYRITE---SNRLHIN 188 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p----~i~W~~~--g~~l~-----------~~~~~~~~~~---~~sL~I~ 188 (558)
++.+...+....+.+|+.++|.|.+.+.|.| .+.|+|+ +.... ....++.... ..+|.|.
T Consensus 133 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 212 (253)
T 3uzq_A 133 ELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTIN 212 (253)
T ss_dssp -CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEEC
Confidence 3445556667788999999999999999887 8999984 22111 0112444322 2369999
Q ss_pred cCCCCCCeEEEEEEEeCCceee-EEEEEEEeccC
Q psy10160 189 QANATDSGEYRCVASNSYTSDE-NAVTIRVEGIF 221 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~~ 221 (558)
+++.+|+|.|.|.|.|..+... .-..|.|.+.+
T Consensus 213 ~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~ 246 (253)
T 3uzq_A 213 PVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPL 246 (253)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC-
T ss_pred CCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 9999999999999999765442 44567776543
No 231
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.49 E-value=2.1e-13 Score=132.27 Aligned_cols=193 Identities=15% Similarity=0.150 Sum_probs=120.8
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEeCCcccCC-----C---------CceeeccccceeeceeEEeeccceeeEEeeece
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTTTTTTEAT-----S---------PHVYAALTHCVPWSNVCLFGARSGYLKETQNGG 125 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~-----~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (558)
+..| .+.+.|...+ .+.|++++..... . .....|.|.|.+.+ ..+.......+.
T Consensus 16 v~~G~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~-------~~~~~~~~~~l~ 84 (289)
T 3ejj_X 16 VEPGETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELE-------DPMAGSTTIHLY 84 (289)
T ss_dssp ECTTCCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC------------CEEEEEE
T ss_pred ECCCCCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEec-------cCCcceeEEEEE
Confidence 3344 5668888766 4999987543211 0 01124555555443 332222223333
Q ss_pred eeeCcE-EEecCCceEeeCCCcEEEEeEeeccCCCe-EEEEE-CCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEE
Q psy10160 126 YLVPVK-VNITLETQVFGVGSDISIPCDVDGYPIPQ-VFWYK-DGQVIENDGVHYRITESNRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 126 ~~~p~~-~~~~~~~~~v~~G~~v~L~C~~~g~P~p~-i~W~~-~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a 202 (558)
+..++. +...+....+.+|+.+.|.|.+.+.|.|. +.|++ ++..+.. +.++....+++|.|.+++.+|+|.|+|.+
T Consensus 85 V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 163 (289)
T 3ejj_X 85 VKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLR-KTVYFFSPWRGFIIRKAKVLDSNTYVCKT 163 (289)
T ss_dssp ECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCT-TCCEEEETTTEEEESSCCGGGCEEEEEEE
T ss_pred EeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCC-CccEEECCCCCEEEeecccccCEEEEEEE
Confidence 333443 56667788889999999999999988876 99986 5666554 44777777889999999999999999999
Q ss_pred E-eCCceeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCCcccccchhhhhh
Q psy10160 203 S-NSYTSDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPSYGPHIKRAVEAE 277 (558)
Q Consensus 203 ~-N~~G~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~~~~w~~~~l~~~ 277 (558)
. |..+..+..+.|.|.... .+|.+...+ . ...+..|....+.| .+.+ .|++.+.|++++....
T Consensus 164 ~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~---~------~~~~~~g~~~~l~C---~~~~~~p~~~i~W~~~~~~~~ 229 (289)
T 3ejj_X 164 MVNGRESTSTGIWLKVNRVHPEPPQIKLEP---S------KLVRIRGEAAQIVC---SATNAEVGFNVILKRGDTKLE 229 (289)
T ss_dssp EETTEEEECCCEEEEEESSCCCCCEEEEES---S------SEECCSSSCEEEEE---EEEESSSCCEEEEEETTEECC
T ss_pred EeCCCccccccEEEEEEECCCCCCeEEecC---C------ceEEEeCCcEEEEE---EeCCCCCceEEEEEECCEEee
Confidence 9 555666778888887432 222222111 1 11112333444444 4446 7899999999975543
No 232
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.49 E-value=7.4e-13 Score=134.27 Aligned_cols=206 Identities=14% Similarity=0.030 Sum_probs=127.2
Q ss_pred CCceEec----CCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCC-ccccC-ceeEEeccCCCCCC
Q psy10160 6 SENYELN----KNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPN-AIDYG-TILSSAFPSESASP 78 (558)
Q Consensus 6 ~~r~~~~----~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~-~v~~~-~~~~~~~~~~~p~p 78 (558)
+.|+.+. +++|.|.+++.+|+|.|+|.|.|..|... ++.|.|..+|........ .+..| .+.+.|...+.|.|
T Consensus 51 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~ 130 (389)
T 2jll_A 51 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPA 130 (389)
T ss_dssp SSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCC
T ss_pred CCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCC
Confidence 3566642 46999999999999999999999998764 677777776654432222 23344 56689999999999
Q ss_pred cEEEEeCCcccCCCC--cee---eccccce---------eeceeEEeeccceeeEEeeeceeeeCcEEEecCCceE--ee
Q psy10160 79 VVTQTTTTTTEATSP--HVY---AALTHCV---------PWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQV--FG 142 (558)
Q Consensus 79 ~v~W~~~~~~~~~~~--~~~---~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--v~ 142 (558)
.+.|++++..+.... +.. .+....+ ...+.|.+.|..+.........+..+|. .+.... ..
T Consensus 131 ~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~---~P~~~~~~~~ 207 (389)
T 2jll_A 131 SIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPS---SPYGVKIIEL 207 (389)
T ss_dssp EEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCC---CCEEEEEEEE
T ss_pred eEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCC---CCcceEEeec
Confidence 999999987776543 111 0000111 1235666666666544333322222221 111111 12
Q ss_pred CCCcEEEEeEee----ccCCC--eEEEEECCEEeccCCceEEE-ccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEE
Q psy10160 143 VGSDISIPCDVD----GYPIP--QVFWYKDGQVIENDGVHYRI-TESNRLHINQANATDSGEYRCVASNSYTSDENAVTI 215 (558)
Q Consensus 143 ~G~~v~L~C~~~----g~P~p--~i~W~~~g~~l~~~~~~~~~-~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 215 (558)
.+..+.|.|... |.|.. .+.|.+++..... .... ....++.|.++...|.|.|.|.|.|..|....+..+
T Consensus 208 ~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~---~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~ 284 (389)
T 2jll_A 208 SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK---IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIE 284 (389)
T ss_dssp CSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE---EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCE
T ss_pred cCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE---EeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcce
Confidence 457788988742 23433 3678877642111 1111 123579999999999999999999999977544333
Q ss_pred EE
Q psy10160 216 RV 217 (558)
Q Consensus 216 ~V 217 (558)
.+
T Consensus 285 ~~ 286 (389)
T 2jll_A 285 IF 286 (389)
T ss_dssp EE
T ss_pred EE
Confidence 34
No 233
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.49 E-value=2.5e-14 Score=147.77 Aligned_cols=193 Identities=12% Similarity=0.139 Sum_probs=114.4
Q ss_pred CeEEEcCCCCCCCEEEEEEEEeCCcce-EEEEEEEEe---------C---CCCccCCCCc---ccc-CceeEEeccCCCC
Q psy10160 14 NMLTIKRVEPERLGAYTCQAYNGLGRA-VSWTVTLQA---------L---PSEKVADPNA---IDY-GTILSSAFPSESA 76 (558)
Q Consensus 14 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~-~s~~l~V~~---------~---p~~~~~~~~~---v~~-~~~~~~~~~~~~p 76 (558)
+.|.|.+++.+| |.|+|.|.|..|.. ....+.+.. . |.....+|.. +.. ..+.+.|...+.+
T Consensus 180 s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~ 258 (434)
T 1igy_B 180 SSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDIS 258 (434)
T ss_dssp EEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCC
T ss_pred EEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccc
Confidence 469999999999 99999999998874 233332220 0 2222233321 444 4666889888874
Q ss_pred ----CCcEEEEeCCcccCCCCce-----eecccc---cee---------eceeEEeeccceeeEEeee----ceeeeCcE
Q psy10160 77 ----SPVVTQTTTTTTEATSPHV-----YAALTH---CVP---------WSNVCLFGARSGYLKETQN----GGYLVPVK 131 (558)
Q Consensus 77 ----~p~v~W~~~~~~~~~~~~~-----~~g~~~---~~~---------~~~~~~~~~~~~~~~~~~~----~~~~~p~~ 131 (558)
.+.++|++++..+...... ..+.|. .+. -.|.|.+.+..+....... ..+..+|.
T Consensus 259 p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~ 338 (434)
T 1igy_B 259 KDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQ 338 (434)
T ss_dssp SSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCC
T ss_pred cCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCE
Confidence 3589999998765432110 001000 011 1245555554442211111 12335666
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEE--EccCC------eEEEccCCCCCCeEEEEE
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYR--ITESN------RLHINQANATDSGEYRCV 201 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~--~~~~~------sL~I~~v~~~D~G~Y~C~ 201 (558)
+...+......+|+.+.|.|.+.|.++| .|.|+|+|..+.... ... ...++ .|.|.....+|+|.|+|.
T Consensus 339 v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~-~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~ 417 (434)
T 1igy_B 339 VYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYK-NTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCS 417 (434)
T ss_dssp CEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCE-ECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEE
T ss_pred EEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCce-eccceeCCCCcEEEEEEEEECchhccCCCEEEEE
Confidence 6555444334467789999999996433 799999998874321 111 12233 467777777889999999
Q ss_pred EEeCCce
Q psy10160 202 ASNSYTS 208 (558)
Q Consensus 202 a~N~~G~ 208 (558)
|.|....
T Consensus 418 a~n~~l~ 424 (434)
T 1igy_B 418 VLHEGLH 424 (434)
T ss_dssp EEETTSG
T ss_pred EEcCCCC
Confidence 9998644
No 234
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.49 E-value=9.4e-14 Score=107.41 Aligned_cols=79 Identities=28% Similarity=0.531 Sum_probs=64.3
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCCceeeEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNSYTSDENA 212 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 212 (558)
..+..+.+|+.+.|.|.+.| |.|.+.|+|+|.++..++ ++.+...+ +|.|.+++.+|+|.|+|.|.| ...+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~ 76 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQG-RVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRI 76 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCS-SEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccc-cEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEE
Confidence 34667889999999999977 999999999999998765 55554433 699999999999999999844 4677
Q ss_pred EEEEEecc
Q psy10160 213 VTIRVEGI 220 (558)
Q Consensus 213 ~~l~V~~~ 220 (558)
+.|.|.+|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 78888643
No 235
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.48 E-value=1.4e-13 Score=112.46 Aligned_cols=90 Identities=26% Similarity=0.356 Sum_probs=71.6
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCC---CeEEEEECCEEecc--CCceEEEc---------cCCeEEEccCCCCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPI---PQVFWYKDGQVIEN--DGVHYRIT---------ESNRLHINQANATD 194 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~---p~i~W~~~g~~l~~--~~~~~~~~---------~~~sL~I~~v~~~D 194 (558)
.|.|...|....+.+|+.++|.|.+.|.|. |.|.|+|++..... .+.++.+. ..++|.|.+++.+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 456666778888999999999999999998 99999998732211 11233332 13579999999999
Q ss_pred CeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 195 SGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
+|.|+|.|.|..|..+..+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999999985
No 236
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.48 E-value=1.6e-14 Score=133.43 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=57.4
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc-CC-CeEEEEECCEEeccCCceEEE-------ccCCeEEEccCCCCCCeEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIENDGVHYRI-------TESNRLHINQANATDSGEYR 199 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~-------~~~~sL~I~~v~~~D~G~Y~ 199 (558)
+|.+...+....+.+|+.+.|.|.+.|. |. |.+.|+|+|..+......... ...++|.|.++..+|+|.|+
T Consensus 113 ~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~ 192 (212)
T 1nfd_E 113 SPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVS 192 (212)
T ss_dssp CCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEE
T ss_pred CCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEE
Confidence 3334333333334579999999999997 54 789999999988643211000 01245899999999999999
Q ss_pred EEEEeCCcee
Q psy10160 200 CVASNSYTSD 209 (558)
Q Consensus 200 C~a~N~~G~~ 209 (558)
|.|.|..+..
T Consensus 193 C~a~n~~~~~ 202 (212)
T 1nfd_E 193 CQVTHEGETV 202 (212)
T ss_dssp EEEECTTTTC
T ss_pred EEEEeCCceE
Confidence 9999987654
No 237
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.48 E-value=2.3e-13 Score=107.28 Aligned_cols=84 Identities=20% Similarity=0.432 Sum_probs=71.9
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
++.+...|....+.+|+.+.|.|.+.|+|.|.+.|+|++..+.... .++|.|.+++.+|+|.|+|.|.|..|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~-------~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 75 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET-------KKLYMVPYVDLEHQGTYWCHVYNDRDS 75 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC-------SSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC-------CCeEEECCCCHHhCEEEEEEEEcCCCC
Confidence 4566777888889999999999999999999999999998876532 358999999999999999999999997
Q ss_pred ee-EEEEEEEec
Q psy10160 209 DE-NAVTIRVEG 219 (558)
Q Consensus 209 ~~-~~~~l~V~~ 219 (558)
.. ..+.|.|.+
T Consensus 76 ~~s~~~~l~V~~ 87 (91)
T 3bfo_A 76 QDSKKVEIIIDE 87 (91)
T ss_dssp EECCCEEEEEC-
T ss_pred EEeeeEEEEEeh
Confidence 64 567787753
No 238
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.48 E-value=1.2e-13 Score=129.69 Aligned_cols=131 Identities=17% Similarity=0.252 Sum_probs=88.4
Q ss_pred CCceEe----cCCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCc
Q psy10160 6 SENYEL----NKNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPV 79 (558)
Q Consensus 6 ~~r~~~----~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~ 79 (558)
.+|+.. .+.+|.|.+++.+|+|.|+|.+.|..+... ...+.|...+
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---------------------------- 133 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTV---------------------------- 133 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCC----------------------------
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCC----------------------------
Confidence 346654 345899999999999999999998765432 2344443211
Q ss_pred EEEEeCCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeecc-C-
Q psy10160 80 VTQTTTTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGY-P- 157 (558)
Q Consensus 80 v~W~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P- 157 (558)
.+|.+...+....+.+|+.+.|.|.+.|. |
T Consensus 134 ------------------------------------------------~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~ 165 (237)
T 3sob_L 134 ------------------------------------------------AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPR 165 (237)
T ss_dssp ------------------------------------------------BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSS
T ss_pred ------------------------------------------------CCCceEEeCCChhhccCCceEEEEEEcccCCC
Confidence 13333333333334568899999999984 4
Q ss_pred CCeEEEEECCEEeccCC-ceE--EEccC------CeEEEccCCCCCCeEEEEEEEeCCceeeEE
Q psy10160 158 IPQVFWYKDGQVIENDG-VHY--RITES------NRLHINQANATDSGEYRCVASNSYTSDENA 212 (558)
Q Consensus 158 ~p~i~W~~~g~~l~~~~-~~~--~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 212 (558)
.|.+.|+|+|..+.... ... ....+ .+|.|..+..+|+|.|+|.|.|........
T Consensus 166 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 229 (237)
T 3sob_L 166 EAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVT 229 (237)
T ss_dssp CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEE
T ss_pred ceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCcee
Confidence 58999999999886421 011 11111 358899999999999999999987655433
No 239
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.48 E-value=7.9e-14 Score=128.83 Aligned_cols=82 Identities=15% Similarity=0.203 Sum_probs=56.4
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCC-ceE--EEccC------CeEEEccCCCCCCeE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDG-VHY--RITES------NRLHINQANATDSGE 197 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~-~~~--~~~~~------~sL~I~~v~~~D~G~ 197 (558)
+|.+...+....+..|+.+.|.|.+.|.|+| .+.|+|+|..+.... ... ....+ ..|.|.....+|+|.
T Consensus 112 ~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~ 191 (213)
T 3r06_A 112 KPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNL 191 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCE
T ss_pred CceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCe
Confidence 3444444444445578889999999987653 799999999886521 111 11112 257888888899999
Q ss_pred EEEEEEeCCceee
Q psy10160 198 YRCVASNSYTSDE 210 (558)
Q Consensus 198 Y~C~a~N~~G~~~ 210 (558)
|+|.|.|......
T Consensus 192 YtC~v~n~~~~~~ 204 (213)
T 3r06_A 192 YTCEVTHKTSTAA 204 (213)
T ss_dssp EEEEEEETTCSSC
T ss_pred EEEEEEecccCcc
Confidence 9999999865443
No 240
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.47 E-value=2.3e-13 Score=126.16 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=54.2
Q ss_pred eeCCCcEEEEeE-eeccCCCeEEEEECCEEeccCCceEEEccC------CeEEEccCCCCCCeEEEEEEEeCCceee--E
Q psy10160 141 FGVGSDISIPCD-VDGYPIPQVFWYKDGQVIENDGVHYRITES------NRLHINQANATDSGEYRCVASNSYTSDE--N 211 (558)
Q Consensus 141 v~~G~~v~L~C~-~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~--~ 211 (558)
...++.+.+.|. +.+.|+|.+.|++++..+.... ......+ +.|.|.++..+|+|.|+|.|.|..|... .
T Consensus 133 ~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~ 211 (225)
T 4fmk_A 133 IGPQSVAVARCVSTGGRPPARITWISSLGGEAKDT-QEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILL 211 (225)
T ss_dssp CSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEE-EEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred ecceeeeeeeeeecCCCCCCEEEEEECCccccCCc-ceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEE
Confidence 345666666666 5667888999999876554321 2222222 2599999999999999999999988764 4
Q ss_pred EEEEEEec
Q psy10160 212 AVTIRVEG 219 (558)
Q Consensus 212 ~~~l~V~~ 219 (558)
+++|.|..
T Consensus 212 ~v~l~V~Y 219 (225)
T 4fmk_A 212 PVTLSVRY 219 (225)
T ss_dssp EEECCBTT
T ss_pred EEEEEEEE
Confidence 55566643
No 241
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.47 E-value=1.3e-13 Score=131.61 Aligned_cols=92 Identities=14% Similarity=0.263 Sum_probs=65.2
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEec-----------cCCceEEEccC---CeEEEccCCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIE-----------NDGVHYRITES---NRLHINQANA 192 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~-----------~~~~~~~~~~~---~sL~I~~v~~ 192 (558)
++.+...+....+.+|+.++|.|.+.+.|.|.+.|+|+ +..+. ....++..... .+|.|.+++.
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 217 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLES 217 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCCh
Confidence 44555566677889999999999999999999999984 22111 01124443322 2699999999
Q ss_pred CCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 193 TDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
+|+|.|+|.+.|..+.. .....|.|.+.
T Consensus 218 ~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 218 EDFVDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC--
T ss_pred hHCEEEEEEEeeCCCcEECCCEEEEEECC
Confidence 99999999999975544 24567777644
No 242
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.47 E-value=1.1e-13 Score=129.46 Aligned_cols=79 Identities=19% Similarity=0.270 Sum_probs=54.1
Q ss_pred EeeCCCcEEEEeEeecc-CCC-eEEEEECCEEecc--CC-----ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 140 VFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEN--DG-----VHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~--~~-----~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+|+.++|.|.+.|. |.| .+.|++++..+.. .. ..|. ..+.|.|.++..+| |.|+|.|.|..+...
T Consensus 132 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 208 (227)
T 1mju_H 132 GDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVTSSTWPS-QSITCNVAHPASSTK 208 (227)
T ss_dssp ------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEE--EEEEEEECTTTTTT-SCCEEEEEEGGGTEE
T ss_pred cccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEE--EEEEEEEchhhcCC-CeEEEEEEECCCCcc
Confidence 35679999999999986 877 8999999876421 11 1221 12469999999888 999999999887776
Q ss_pred EEEEEEEeccC
Q psy10160 211 NAVTIRVEGIF 221 (558)
Q Consensus 211 ~~~~l~V~~~~ 221 (558)
....+.+.++|
T Consensus 209 ~~~~~~~~~~p 219 (227)
T 1mju_H 209 VDKKIEPRGPT 219 (227)
T ss_dssp EEEECCCCCC-
T ss_pred eEEEeCCCCCC
Confidence 66676665554
No 243
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.47 E-value=1.9e-13 Score=131.96 Aligned_cols=83 Identities=16% Similarity=0.376 Sum_probs=59.3
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEe----------------ccCCceEEEccC-----CeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVI----------------ENDGVHYRITES-----NRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l----------------~~~~~~~~~~~~-----~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.|.| .|.+.|+|++ ... .....++.+..+ .+|.|.++
T Consensus 141 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 220 (276)
T 3auv_A 141 SGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSL 220 (276)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCC
Confidence 4567788999999999999987 5889999963 211 011235555432 27999999
Q ss_pred CCCCCeEEEEEEEeCC---cee--eEEEEEEEe
Q psy10160 191 NATDSGEYRCVASNSY---TSD--ENAVTIRVE 218 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~---G~~--~~~~~l~V~ 218 (558)
+.+|+|.|+|.|.|.. +.. .....|.|.
T Consensus 221 ~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~ 253 (276)
T 3auv_A 221 RAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVS 253 (276)
T ss_dssp CGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC
T ss_pred ChhHCEEEEEEEEcCcCCcCceEECCCEEEEEc
Confidence 9999999999999983 211 233566664
No 244
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.47 E-value=9.2e-14 Score=125.72 Aligned_cols=157 Identities=19% Similarity=0.275 Sum_probs=106.6
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE-CCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK-DGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~-~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+...+.+..+.+|+.+.|.|.+.|.|. .+.|++ ++..+...+ ++.+..++ +|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~-~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQ-RVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCc-eEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 4566778888999999999999999987 899999 677665543 55554444 89999999999999999999998
Q ss_pred cee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh---hh
Q psy10160 207 TSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA---AD 282 (558)
Q Consensus 207 G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~---~~ 282 (558)
|.. +..+.|.|..++ .+...+ .. .. +.. +......|.+.|.|+|.+.|++++....... ..
T Consensus 82 g~~~~~~~~l~v~~~p---~~~~~~--~~-~~------~~~---g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~ 146 (189)
T 2v44_A 82 GQTQEATVVLEIYQKL---TFREVV--SP-QE------FKQ---GEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFA 146 (189)
T ss_dssp SCEEEEEEEEEEECCC---EEESCC--CS-EE------EET---TSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEE
T ss_pred CCcEEEEEEEEEecCC---ceeecC--Cc-EE------EeC---CCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEE
Confidence 877 677888886543 222111 11 11 122 2334456666789999999999976654211 11
Q ss_pred hhhcccccchhhhhhhHHHhhc
Q psy10160 283 KKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 283 ~~~~grth~q~a~~~t~g~~~~ 304 (558)
....+...+..+.....|.|..
T Consensus 147 ~~~~~~L~i~~v~~~d~G~Y~C 168 (189)
T 2v44_A 147 MLANNNLQILNINKSDEGIYRC 168 (189)
T ss_dssp ECTTSCEEETTCCGGGCEEEEE
T ss_pred EecCCcEEEEEcCcccCeEEEE
Confidence 2223455555666666665544
No 245
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.5e-13 Score=110.24 Aligned_cols=83 Identities=23% Similarity=0.468 Sum_probs=71.1
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTI 215 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l 215 (558)
+....+.+|+.+.|.|.+.|.| |.+.|+|++..+.... ++.+. +++|.|.+++.+|+|.|+|.|.|..|.....+.|
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~-~~~~~-~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l 86 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESN-RTRIT-GEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCS-SEEEC-SSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCC-cEEEE-CCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEE
Confidence 3455678999999999999987 8999999998886654 55554 6799999999999999999999999999999999
Q ss_pred EEeccC
Q psy10160 216 RVEGIF 221 (558)
Q Consensus 216 ~V~~~~ 221 (558)
.|.+.+
T Consensus 87 ~V~~~~ 92 (99)
T 2cr3_A 87 NVSDAL 92 (99)
T ss_dssp CBCSCC
T ss_pred EEecCC
Confidence 886544
No 246
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.47 E-value=1.5e-13 Score=125.88 Aligned_cols=127 Identities=21% Similarity=0.243 Sum_probs=89.0
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCC-----CeEEEEECCEEeccCCceEEEccC------CeEEEccCCCCCCeEEEEEE
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPI-----PQVFWYKDGQVIENDGVHYRITES------NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~-----p~i~W~~~g~~l~~~~~~~~~~~~------~sL~I~~v~~~D~G~Y~C~a 202 (558)
.++....+.+|+.+.|.|.+.+.|. |.+.|+|++........++.+..+ .+|.|.+++.+|+|.|+|.+
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 3445677899999999999999987 899999944443332334444332 58999999999999999999
Q ss_pred EeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 203 SNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
.|..|.....+.|.|..++..|... + .....|.... ..|.+.|.|.|.+.|+++....
T Consensus 87 ~~~~~~~~~~~~l~V~~~~~~p~~~---------~----~~~~~g~~v~---l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASYMRIDTR---------I----LEVPGTGEVQ---LTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCCCEEEE---------E----EECTTTCCEE---EEEEEEEBSCCEEEETTCCSCC
T ss_pred EeCCCcceEEEEEEecCCCCcccEE---------E----EecCCCCeEE---EEEEccccCCceEEEEeCCCCc
Confidence 9999988899999997654222211 0 0112233344 4455568999999999976543
No 247
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=129.65 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=57.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCC-CeEEEEEC--CEEecc-----------CCceEEEccC---CeEEEccCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPI-PQVFWYKD--GQVIEN-----------DGVHYRITES---NRLHINQAN 191 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~-p~i~W~~~--g~~l~~-----------~~~~~~~~~~---~sL~I~~v~ 191 (558)
++.+...+....+.+|+.++|.|.+.+.|. |.+.|+|. +..+.. ...++.+..+ .+|.|.+++
T Consensus 149 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 149 EIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 344455566778899999999999999887 89999983 222110 1224443322 369999999
Q ss_pred CCCCeEEEEEEEeCCce
Q psy10160 192 ATDSGEYRCVASNSYTS 208 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~ 208 (558)
.+|+|.|.|.|.|..+.
T Consensus 229 ~~DsG~Y~C~~~~~~~~ 245 (256)
T 3juy_B 229 PEDFALYYCQVYGASSY 245 (256)
T ss_dssp GGGCSEEEEEECCSSCC
T ss_pred HhHCEEEEEEEeeCCCc
Confidence 99999999999996543
No 248
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.46 E-value=8.1e-13 Score=130.82 Aligned_cols=171 Identities=10% Similarity=0.025 Sum_probs=104.0
Q ss_pred eeeEEeeeceeeeCcEEE--ecCCceEeeCC---CcEEEEeE-eeccCCCeEEEEECCEEecc------CCceEEEccCC
Q psy10160 116 GYLKETQNGGYLVPVKVN--ITLETQVFGVG---SDISIPCD-VDGYPIPQVFWYKDGQVIEN------DGVHYRITESN 183 (558)
Q Consensus 116 ~~~~~~~~~~~~~p~~~~--~~~~~~~v~~G---~~v~L~C~-~~g~P~p~i~W~~~g~~l~~------~~~~~~~~~~~ 183 (558)
+.......+.+..+|.+. ..+....+.+| +.+.|.|. +.|.|.|.+.|++++..... .+..+. ...
T Consensus 117 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~~~ 194 (331)
T 3u83_A 117 GNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVT--VIS 194 (331)
T ss_dssp EEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEE--EEE
T ss_pred CccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEE--EEE
Confidence 333334444455555553 35566778888 77999998 89999999999995322111 111111 123
Q ss_pred eEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC
Q psy10160 184 RLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL 263 (558)
Q Consensus 184 sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~ 263 (558)
.|.|.++..+|+|.|+|.|.|..|..+..+.|.|..+|. +...+ .. ...+.. +......|.+.|.|
T Consensus 195 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~---~~~~~--~~------~~~~~~---g~~~~l~C~~~g~p 260 (331)
T 3u83_A 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE---VTIEG--FD------GNWYLQ---RMDVKLTCKADANP 260 (331)
T ss_dssp EEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE---EEEEC--CC------SCCBTT---CCCEEEEEEEEEES
T ss_pred EEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe---EEEec--CC------CceEeC---CCeEEEEEeCcCCC
Confidence 588888999999999999999999998999998865441 11000 00 001122 33334555666899
Q ss_pred CCc-ccccchhhhhhhhhhhhhhcccccch-hhhhhhHHHhhc
Q psy10160 264 PSY-GPHIKRAVEAEAAAADKKRRSRRSLS-VVNKWSLRQAFT 304 (558)
Q Consensus 264 ~~~-~~w~~~~l~~~~~~~~~~~~grth~q-~a~~~t~g~~~~ 304 (558)
+|. +.|++++....... ....+...+. .+.....|.|..
T Consensus 261 ~p~~i~W~~~~~~~~~~~--~~~~~~L~i~~~v~~~d~G~Y~C 301 (331)
T 3u83_A 261 PATEYHWTTLNGSLPKGV--EAQNRTLFFKGPINYSLAGTYIC 301 (331)
T ss_dssp CCCEEEEEETTBSCCTTE--EEETTEEEECSCCCGGGCEEEEE
T ss_pred CCCEEEEEECCCcccccc--eecCcEEEEeCCCccccCeEEEE
Confidence 998 99999875543221 1112334444 455555555444
No 249
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=1.5e-13 Score=111.17 Aligned_cols=90 Identities=23% Similarity=0.371 Sum_probs=73.5
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEccC---CeEEEccCCCCCCeEEEEEEEe
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRITES---NRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
|+.+...+.+..+.+|+.+.|.|.+.+ |.|.+.|+|++..+..+.. +|.+..+ .+|.|.+++.+|+|.|+|.|.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 555777788889999999999999988 7799999999999876542 4455443 4799999999999999999988
Q ss_pred CCceeeEEEEEEEeccCCC
Q psy10160 205 SYTSDENAVTIRVEGIFIH 223 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~~~ 223 (558)
....+.|.|.+++.+
T Consensus 86 ----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp ----EEEEEEEEEECCCSC
T ss_pred ----CcEEEEEEEeCCCCC
Confidence 467788888766543
No 250
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.46 E-value=1.4e-13 Score=128.05 Aligned_cols=72 Identities=18% Similarity=0.293 Sum_probs=54.2
Q ss_pred EeeCCCcEEEEeEeecc-CCC-eEEEEECCEEe---ccCC----ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 140 VFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVI---ENDG----VHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l---~~~~----~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+|+.+.|.|.+.|. |.| .+.|++++... .... ..|.. .+.|.|.++..+| |.|+|.|.|..|..+
T Consensus 136 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 212 (220)
T 1pz5_B 136 SDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSL--SSLVTVPSSTWPS-QTVICNVAHPASKVD 212 (220)
T ss_dssp CCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEE--EEEEEECGGGTTT-SCCEEEEEEGGGTEE
T ss_pred ccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEE--EEEEEEcchhcCC-ceEEEEEEECCccEe
Confidence 35689999999999998 999 99999988631 1110 12222 3579999998877 999999999999776
Q ss_pred EEEE
Q psy10160 211 NAVT 214 (558)
Q Consensus 211 ~~~~ 214 (558)
..+.
T Consensus 213 ~~~~ 216 (220)
T 1pz5_B 213 LIKE 216 (220)
T ss_dssp EEEE
T ss_pred eeec
Confidence 6544
No 251
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.46 E-value=2.4e-13 Score=124.84 Aligned_cols=74 Identities=20% Similarity=0.415 Sum_probs=60.7
Q ss_pred eCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEccCCeEEEccC-CCCCCeEEEEEEEeCCcee-eEEEEEEE
Q psy10160 142 GVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRITESNRLHINQA-NATDSGEYRCVASNSYTSD-ENAVTIRV 217 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~sL~I~~v-~~~D~G~Y~C~a~N~~G~~-~~~~~l~V 217 (558)
.+|+.++|.|. |.|.|.+.|+|++..+..... +.....+++|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.|
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 48999999999 889999999999998865421 222235789999999 9999999999999999974 56666665
No 252
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.46 E-value=1.5e-13 Score=122.99 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=87.7
Q ss_pred eEeeCCCcEEEEeEeec--cCCCeEEEEECCEEec---------cCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 139 QVFGVGSDISIPCDVDG--YPIPQVFWYKDGQVIE---------NDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g--~P~p~i~W~~~g~~l~---------~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
..+.+|+.+.|.|...+ .|.|.|.|+|++..+. ....++.+..+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g 85 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNG 85 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTC
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCC
Confidence 45689999999996544 6677899999997552 123477777788999999999999999999999999
Q ss_pred ee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 208 SD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 208 ~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
.. +..+.|.|..++..|.+ ...+ .. ....|.+.|.|+|.+.|++++...
T Consensus 86 ~~~~~~~~~l~V~~~~~~p~i-----------~~~~------~~---v~L~C~~~g~p~p~i~W~~~g~~l 136 (176)
T 1hng_A 86 TRILNKALDLRILEMVSKPMI-----------YWEC------SN---ATLTCEVLEGTDVELKLYQGKEHL 136 (176)
T ss_dssp CEEEEEEEEEEEECCCCCCEE-----------EEET------TT---TEEEEECSSCSSCEEEEEETTEEE
T ss_pred CEEEEEEEEEEEeCCCCCCEE-----------EecC------Cc---EEEEEEecCCCCcEEEEEECCEEC
Confidence 87 67788888654322221 1111 01 235676779999999999987543
No 253
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=1.9e-13 Score=122.83 Aligned_cols=132 Identities=20% Similarity=0.296 Sum_probs=92.9
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEcc-----CCeEEEccCCCCCCeEEEEEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITE-----SNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-----~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.... .++|.|.+++.+|+|.|+|.+.
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLD-QLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSE-EEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCC-ceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 4566677788889999999999999999999999999999887653 332222 2589999999999999999999
Q ss_pred eCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-cccccchhhhh
Q psy10160 204 NSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS-YGPHIKRAVEA 276 (558)
Q Consensus 204 N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~-~~~w~~~~l~~ 276 (558)
|..|.. +..+.|.|..+| .+...+ .. ..+..|.... ..|.+.|.|+| .+.|++++...
T Consensus 81 ~~~~~~~~~~~~l~V~~~p---~~~~~~---~~------~~~~~g~~~~---l~C~~~g~p~p~~v~W~~~~~~~ 140 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVP---FFTVEP---KD------LAVPPNAPFQ---LSCEAVGPPEPVTIVWWRGTTKI 140 (182)
T ss_dssp SCTTCEECCCEEEEEECSC---EEEECC---CC------EEECTTCCEE---EEEEEECSSSCCEEEEEETTEEC
T ss_pred cCCCcEEEEEEEEEEecCC---eEEecC---cc------eEecCCCEEE---EEeEecCCCCCCEEEEEcCCeEC
Confidence 997754 567888886543 222111 11 1122333344 44555689999 89999987554
No 254
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.46 E-value=2.8e-13 Score=124.71 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=95.3
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec-----------cCCceEEEccCCeEEEccCCCCCCeE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE-----------NDGVHYRITESNRLHINQANATDSGE 197 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~-----------~~~~~~~~~~~~sL~I~~v~~~D~G~ 197 (558)
|..+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+. ....++... +++|.|.+++.+|+|.
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS-SSGITFSSVTRKDNGE 79 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE-TTEEEESCCCGGGCEE
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee-ceeEEEcccCcccCeE
Confidence 3456677788889999999999999999999999999875521 112244443 3789999999999999
Q ss_pred EEEEEEeCCc--eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEecc-CCCCCCCcccccchhh
Q psy10160 198 YRCVASNSYT--SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCT-RAGQLPSYGPHIKRAV 274 (558)
Q Consensus 198 Y~C~a~N~~G--~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~-~~g~~~~~~~w~~~~l 274 (558)
|+|.+.|..| ..+..+.|.|..++..+.... . ..+..|.... ..|. ..+.|+|.+.|++++.
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~-----~-------~~~~~g~~~~---l~C~~~~~~p~~~i~W~~~~~ 144 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISV-----P-------SSVTIGNRAV---LTCSEHDGSPPSEYSWFKDGI 144 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEEBCCCCCEEEC-----C-------SEEETTSCEE---EEEECSCCBSCCEEEEEETTE
T ss_pred EEEEEEccCCCcccEEEEEEEEEcCCCCcccCC-----c-------cccCCCCeEE---EEEEcccCcCCCEEEEEeCCc
Confidence 9999999977 556778888875543222211 1 1122333344 4555 5689999999999976
Q ss_pred -hhh
Q psy10160 275 -EAE 277 (558)
Q Consensus 275 -~~~ 277 (558)
...
T Consensus 145 ~~l~ 148 (212)
T 1f97_A 145 SMLT 148 (212)
T ss_dssp ESBC
T ss_pred cccc
Confidence 443
No 255
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=8e-14 Score=114.40 Aligned_cols=92 Identities=23% Similarity=0.342 Sum_probs=72.7
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc---CCCeEEEEECCE-EeccC-CceEEEcc---------CCeEEEccCCCCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY---PIPQVFWYKDGQ-VIEND-GVHYRITE---------SNRLHINQANATD 194 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~---P~p~i~W~~~g~-~l~~~-~~~~~~~~---------~~sL~I~~v~~~D 194 (558)
++.|...|.+..+.+|+.++|.|.+.|. |.|.|.|+|+.. .+... +.++.+.. +.+|.|.+++.+|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4456667888999999999999999885 799999999741 22111 22333321 3579999999999
Q ss_pred CeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 195 SGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
+|.|+|.|.|..|..++.+.|.|..+
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEECC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 99999999999999999999999754
No 256
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=111.27 Aligned_cols=91 Identities=26% Similarity=0.476 Sum_probs=76.3
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.+ |.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQ-KYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSS-SEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCC-CEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 5778888888899999999999999998 888999999999887654 55555444 699999999999999999999
Q ss_pred CCceeeEEEEEEEeccCCCC
Q psy10160 205 SYTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~~~p 224 (558)
....+.|.|..++.+|
T Consensus 85 ----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 85 ----SKSTASLHVEEKASGP 100 (103)
T ss_dssp ----CEEEEEEEECCCSSSS
T ss_pred ----CCcEEEEEEeCCCCCC
Confidence 4677888897665443
No 257
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.45 E-value=3.5e-14 Score=130.80 Aligned_cols=159 Identities=10% Similarity=0.023 Sum_probs=98.6
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEee-ccCCCeEEEEECCEEeccCCceEEEccC---C--eEEEccCCCCCCeEEEEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRITES---N--RLHINQANATDSGEYRCVA 202 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~--sL~I~~v~~~D~G~Y~C~a 202 (558)
+|.|.... ...+.+|+.+.|.|.+. +.|.|.+.|+|||.++..+. ++.+..+ + +|.|.+++.+|+|.|+|.|
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~-~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a 80 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGP-KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQL 80 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSS-SCEEEECTTTCEEEEEESCCCGGGCEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCC-CEEEEEeCCCCEEEEEECCCChhhCEEEEEEE
Confidence 34444433 56788999999999986 47999999999999997654 4443322 2 6999999999999999999
Q ss_pred EeCCceeeEEEEEEEeccC------------------CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-C
Q psy10160 203 SNSYTSDENAVTIRVEGIF------------------IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-L 263 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~~~~------------------~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~ 263 (558)
.| |.......+.+.... .+|.+... . ...+..| ......|.+.|. |
T Consensus 81 ~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~---------~-~~~v~~g---~~v~l~C~v~g~~P 145 (207)
T 3rbs_A 81 QD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEY---------L-SWEVTGE---CNVLLKCKVANIKK 145 (207)
T ss_dssp EE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEE---------E-EEEEETT---TEEEEEEEEESCCT
T ss_pred EC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEec---------C-CcEEcCC---CcEEEEEEEeCCCC
Confidence 99 555544444332110 01221110 0 1122233 334455666688 9
Q ss_pred CCcccccchhhhhhhhhhhhhhcc--cccchhhhhhhHHHhhc
Q psy10160 264 PSYGPHIKRAVEAEAAAADKKRRS--RRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 264 ~~~~~w~~~~l~~~~~~~~~~~~g--rth~q~a~~~t~g~~~~ 304 (558)
+|.+.|++++..+.....-....+ ..++..+.+...|.|-.
T Consensus 146 ~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 188 (207)
T 3rbs_A 146 ETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEV 188 (207)
T ss_dssp TCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEE
T ss_pred CCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEE
Confidence 999999999876644321111122 24556666666666654
No 258
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.45 E-value=3.3e-13 Score=125.57 Aligned_cols=69 Identities=22% Similarity=0.414 Sum_probs=52.6
Q ss_pred EeeCCCcEEEEeEeecc-CC--CeEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 140 VFGVGSDISIPCDVDGY-PI--PQVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~--p~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.+.+|+.++|.|.+.|. |. |.+.|++++..+.. .+..|.. ...|.|.+...+|.|.|+|.|.|..|.
T Consensus 133 ~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 133 PALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTM--SNQLTLPAVECPEGESVKCSVQHDSNP 210 (220)
T ss_dssp SSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEE--EEEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred cccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEE--EEEEEECHHHcCCCCeEEEEEEcCCCc
Confidence 35689999999999987 76 78999999876521 1112221 125899999999999999999999987
Q ss_pred ee
Q psy10160 209 DE 210 (558)
Q Consensus 209 ~~ 210 (558)
..
T Consensus 211 ~~ 212 (220)
T 2fbj_H 211 VQ 212 (220)
T ss_dssp CE
T ss_pred eE
Confidence 64
No 259
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.45 E-value=1.1e-13 Score=127.78 Aligned_cols=70 Identities=19% Similarity=0.297 Sum_probs=52.8
Q ss_pred EeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC--C-----ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 140 VFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND--G-----VHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~--~-----~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+|+.+.|.|.+.|. |.| .+.|++++..+... . ..+. ..+.|.|.++..+| |.|+|.|.|..|...
T Consensus 129 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 129 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp SCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEE--EEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred ccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEE--EEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 35689999999999997 888 99999998754211 1 1111 12369999998877 999999999998765
Q ss_pred EE
Q psy10160 211 NA 212 (558)
Q Consensus 211 ~~ 212 (558)
..
T Consensus 206 ~~ 207 (210)
T 3d9a_H 206 VD 207 (210)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 260
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.45 E-value=1.5e-13 Score=126.08 Aligned_cols=124 Identities=16% Similarity=0.119 Sum_probs=83.0
Q ss_pred ceEeeCCCcEEEEeE---eeccCCCeEEEEECCEEecc-------C---------CceEEE---ccCCeEEEccCCCCCC
Q psy10160 138 TQVFGVGSDISIPCD---VDGYPIPQVFWYKDGQVIEN-------D---------GVHYRI---TESNRLHINQANATDS 195 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~---~~g~P~p~i~W~~~g~~l~~-------~---------~~~~~~---~~~~sL~I~~v~~~D~ 195 (558)
..++..|+.++|.|. +.+.|.|.+.|+|+|..... . ..++.+ ....+|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 456789999999994 67889999999997642211 0 011111 1224799999999999
Q ss_pred eEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhh
Q psy10160 196 GEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVE 275 (558)
Q Consensus 196 G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~ 275 (558)
|.|+|.|.|..|.....+.|.|..|+ .+.. ......+..|.... ..|.+.|.|+|.+.|++++..
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~---~~~~---------~~~~~~v~~g~~~~---l~C~~~G~P~P~v~W~~~~~~ 146 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPL---TLSV---------HSERSQFPDFSVLT---VTCTVNAFPHPHVQWLMPEGV 146 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEE---EEEE---------EEEECCSSCSCCEE---EEEEEEEESCCEEEECCC---
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCc---eeee---------cceeEEEcCCCEEE---EEEEcCCCCCCEEEEEECCee
Confidence 99999999999999999999996543 1110 00111122333334 455566999999999987543
Q ss_pred h
Q psy10160 276 A 276 (558)
Q Consensus 276 ~ 276 (558)
.
T Consensus 147 ~ 147 (203)
T 4fa8_A 147 E 147 (203)
T ss_dssp -
T ss_pred e
Confidence 3
No 261
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.44 E-value=5.4e-13 Score=123.85 Aligned_cols=161 Identities=17% Similarity=0.221 Sum_probs=105.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
..+.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+... .+++|.|.+++.+|+|.|+|.+.|..|
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~~~n~~~ 89 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNG-------NTSELIFNAVHVKDAGFYVCRVNNNFT 89 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTC-------CSSEEEETTCCGGGCEEEEEEEECTTC
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCC-------CCCEEEEccCChhhCeEeEEEEEcCCC
Confidence 4567778888999999999999999999999999999999887653 346899999999999999999999988
Q ss_pred ee-eEEEEEEEeccCCCC--CCCCCCccccceeEEe--ceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhh
Q psy10160 208 SD-ENAVTIRVEGIFIHP--SCRDLPLFANCKLIVE--GRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAAD 282 (558)
Q Consensus 208 ~~-~~~~~l~V~~~~~~p--~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~ 282 (558)
.. +..+.|.|...+... .....+. ....+... ...+..|.. ....|.+.|.|++.+.|++++.......
T Consensus 90 ~~~s~~~~l~V~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~v~~G~~---v~L~C~~~g~p~~~v~W~~~~~~~~~~~-- 163 (218)
T 3k0w_A 90 FEFSQWSQLDVCDIPESFQRSVDGVSE-SKLQICVEPTSQKLMPGST---LVLQCVAVGSPIPHYQWFKNELPLTHET-- 163 (218)
T ss_dssp CEECCCEEEEEECCCGGGCTTCCSBCC-SSCEEEECCCCEEECTTCC---EEEECEEEBSSCCEEEEEETTEECTTCC--
T ss_pred CceeeEEEEEEEccCcccccccccccC-CCceEEECCCceeecCCCc---EEEEEEecccCCCeEEEEECCEECCCCC--
Confidence 65 566778886543110 0000000 00011111 112233333 4455656689999999999875543222
Q ss_pred hhhcccccchhhhhhhHHHhhc
Q psy10160 283 KKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 283 ~~~~grth~q~a~~~t~g~~~~ 304 (558)
.+...+..+.....|.|..
T Consensus 164 ---~~~L~i~~v~~~d~G~Y~C 182 (218)
T 3k0w_A 164 ---KKLYMVPYVDLEHQGTYWC 182 (218)
T ss_dssp ---SSEEEESSCCGGGCEEEEE
T ss_pred ---CCEEEEeecChhcCEEEEE
Confidence 1233444555555555544
No 262
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.44 E-value=4.5e-13 Score=120.92 Aligned_cols=136 Identities=18% Similarity=0.251 Sum_probs=94.5
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc-CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN-DGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
+|.+...+.+..+.+|+.+.|.|.+.+.|.|.+.|++++..+.. ...++....+++|.|.+++.+|+|.|+|.+.|..+
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 81 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEAR 81 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTT
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCC
Confidence 56777888889999999999999999999999999999988764 34577777788999999999999999999999875
Q ss_pred eee--EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhh
Q psy10160 208 SDE--NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 208 ~~~--~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~ 277 (558)
... ..+.+.|..++ .....+... .. .+.. +......|.+.|.|.+.+.|++++....
T Consensus 82 ~~~~~~~~~l~v~~~p---~~~~~~~~~--~~-----~~~~---g~~v~l~C~~~g~p~~~v~W~~~g~~~~ 140 (189)
T 2v5t_A 82 GEIDFRDIIVIVNVPP---AISMPQKSF--NA-----TAER---GEEMTFSCRASGSPEPAISWFRNGKLIE 140 (189)
T ss_dssp TEEEEEEEEEEEEEEE---EEECSCCEE--EE-----ETTS---CCCEEEECEEEEESCCEEEEEETTEECC
T ss_pred CceEEEEEEEEecCCC---Ccccccccc--cc-----cccC---CCcEEEEEEEccCCCCeEEEEECCEECc
Confidence 443 45566665433 111111000 00 1112 3334456666688999999999876543
No 263
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.44 E-value=7.1e-13 Score=123.56 Aligned_cols=71 Identities=14% Similarity=0.314 Sum_probs=54.5
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEE-CCEEecc--------CCceEEEccCCeEEEccCCC--CCCeEEEEEEEeCCc
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYK-DGQVIEN--------DGVHYRITESNRLHINQANA--TDSGEYRCVASNSYT 207 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~-~g~~l~~--------~~~~~~~~~~~sL~I~~v~~--~D~G~Y~C~a~N~~G 207 (558)
+.+|+.+.|.|.+.|. |.| .+.|++ +|..+.. .+..|.. .+.|.|..... +|.|.|+|.|.|..+
T Consensus 138 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~~d~g~y~C~v~n~~~ 215 (223)
T 1dee_B 138 SNPSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA--TSQVLLPSKDVAQGTNEHVVCKVQHPNG 215 (223)
T ss_dssp CCSSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEE--EEEEEEECTTTTSTTCCEEEEEEECTTC
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEE--EEEEEEcHHHhccCCCCEEEEEEEeCCC
Confidence 4689999999999987 877 899999 8877643 0123322 23688888876 889999999999998
Q ss_pred eeeEEE
Q psy10160 208 SDENAV 213 (558)
Q Consensus 208 ~~~~~~ 213 (558)
.....+
T Consensus 216 ~~~~~~ 221 (223)
T 1dee_B 216 NKEKDV 221 (223)
T ss_dssp CEEEEE
T ss_pred CCcccc
Confidence 876543
No 264
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.44 E-value=1.5e-13 Score=130.79 Aligned_cols=69 Identities=17% Similarity=0.313 Sum_probs=51.0
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC-Cce--EEEccCC------eEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND-GVH--YRITESN------RLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~-~~~--~~~~~~~------sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.++|.|.+.|. |.| .+.|+|+|..+... ... .....++ .|.|.++..+|+|.|+|.|.|.....
T Consensus 162 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 162 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp HHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred hcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 3478999999999984 544 69999999987643 101 1111222 48999999999999999999976554
No 265
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.44 E-value=7.2e-13 Score=109.82 Aligned_cols=93 Identities=25% Similarity=0.483 Sum_probs=74.5
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC----ceEEEccCCeEEEc-----cCCCCCCeE
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG----VHYRITESNRLHIN-----QANATDSGE 197 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~~~sL~I~-----~v~~~D~G~ 197 (558)
..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.... .+.....++.+.+. +++.+|+|.
T Consensus 7 ~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G~ 86 (117)
T 2v9t_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGV 86 (117)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCEE
T ss_pred cCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCEE
Confidence 368888888889999999999999999999999999999999887542 12334455655554 457999999
Q ss_pred EEEEEEeCCceee-EEEEEEEec
Q psy10160 198 YRCVASNSYTSDE-NAVTIRVEG 219 (558)
Q Consensus 198 Y~C~a~N~~G~~~-~~~~l~V~~ 219 (558)
|+|.|.|..|... ..+.|.|..
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~~ 109 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVAA 109 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC-
T ss_pred EEEEEEeCccceEeeeEEEEhhh
Confidence 9999999999885 557777753
No 266
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.44 E-value=1.4e-12 Score=118.13 Aligned_cols=124 Identities=17% Similarity=0.242 Sum_probs=90.5
Q ss_pred CcEEEecCCceEeeC-CCcEEEEeEeeccCC--CeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLETQVFGV-GSDISIPCDVDGYPI--PQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~~~~v~~-G~~v~L~C~~~g~P~--p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
||.+... ....+.+ |+.+.|.|.+.+.|. |.+.|+|++..+..... + ..+++|.|.+++.+|+|.|+|.+.|.
T Consensus 3 ~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~-~--~~~~~L~i~~~~~~d~G~Y~C~~~n~ 78 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK-N--ASNMEYRINKPRAEDSGEYHCVYHFV 78 (190)
T ss_dssp CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCB-C--CSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccce-E--eccEEEEEecCCcccCEEEEEEEEeC
Confidence 5666554 4455656 999999999999987 78999999999876432 1 24568999999999999999999999
Q ss_pred CceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccch
Q psy10160 206 YTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKR 272 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~ 272 (558)
|.....+.|.|..++ .+...+ . ...+..|....+. |.+.|.|+|.+.|+++
T Consensus 79 -~~~~~~~~l~V~~~p---~~~~~~---~------~~~~~~g~~v~l~---C~~~g~p~p~i~W~~~ 129 (190)
T 2wv3_A 79 -SAPKANATIEVKAAP---DITGHK---R------SENKNEGQDAMMY---CKSVGYPHPEWMWRKK 129 (190)
T ss_dssp -TEEEEEEEEEEECCC---EEEEEC---S------EEEEETTSCEEEE---EEEECSSCCEEEEEEE
T ss_pred -CcccccEEEEEecCC---cccccC---C------cceeeCCCcEEEE---EEeCccCCCceEEEEc
Confidence 888899999996542 222111 1 1112333344444 4456899999999994
No 267
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.44 E-value=4.5e-13 Score=127.79 Aligned_cols=90 Identities=14% Similarity=0.350 Sum_probs=62.4
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEEC--CEEec----c-------CCceEEEcc---CCeEEEccCCC
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKD--GQVIE----N-------DGVHYRITE---SNRLHINQANA 192 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~--g~~l~----~-------~~~~~~~~~---~~sL~I~~v~~ 192 (558)
+.+...+....+.+|+.++|.|.+.+.|.| .+.|+|. +..+. . ...++.... ..+|.|.+++.
T Consensus 142 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 221 (257)
T 3gkz_A 142 IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA 221 (257)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred eEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh
Confidence 344455666788999999999999999988 8999983 22211 0 012443332 23699999999
Q ss_pred CCCeEEEEEEEeCCcee-eEEEEEEEec
Q psy10160 193 TDSGEYRCVASNSYTSD-ENAVTIRVEG 219 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~-~~~~~l~V~~ 219 (558)
+|+|.|.|.|.|..... ..-..|.|..
T Consensus 222 ~D~G~Y~C~~~~~~~~~fg~gt~l~v~~ 249 (257)
T 3gkz_A 222 EDAASYFCHQWSSFPFTFGSGTKLEIKR 249 (257)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 99999999999865433 2334566653
No 268
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=8.2e-14 Score=130.79 Aligned_cols=72 Identities=15% Similarity=0.240 Sum_probs=53.1
Q ss_pred eCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCce--EEEcc------CCeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 142 GVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVH--YRITE------SNRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~--~~~~~------~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
.+|+.++|.|.+.|.|+| .+.|+|+|..+...... ..... .+.|.|.++..+|+|.|+|.|.|..+....
T Consensus 148 ~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 148 LQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp HTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred hcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 468899999999986443 89999999988643110 00111 135899999999999999999999877554
Q ss_pred EE
Q psy10160 212 AV 213 (558)
Q Consensus 212 ~~ 213 (558)
++
T Consensus 228 ~~ 229 (234)
T 2j6e_L 228 TV 229 (234)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 269
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.43 E-value=4e-13 Score=127.52 Aligned_cols=70 Identities=23% Similarity=0.378 Sum_probs=52.8
Q ss_pred cCCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEecc----------------CCceEEEccCC-----eEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIEN----------------DGVHYRITESN-----RLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~~----------------~~~~~~~~~~~-----sL~I~~ 189 (558)
.+....+.+|+.++|.|.+.+.| .|.+.|+|+ +..+.. ...++.+..++ +|.|.+
T Consensus 137 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 216 (250)
T 3esu_F 137 QSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSS 216 (250)
T ss_dssp ECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECC
Confidence 34556788999999999999877 788999997 432210 01345544322 699999
Q ss_pred CCCCCCeEEEEEEEe
Q psy10160 190 ANATDSGEYRCVASN 204 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N 204 (558)
++.+|+|.|.|.+.|
T Consensus 217 v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 217 LTSVDSAVYFCARSG 231 (250)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CCcccCEEEEEEEec
Confidence 999999999999998
No 270
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.43 E-value=8.2e-13 Score=105.66 Aligned_cols=87 Identities=22% Similarity=0.430 Sum_probs=70.1
Q ss_pred CcEEEe-cCCceEeeCCCcEEEEeEee-ccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 129 PVKVNI-TLETQVFGVGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 129 p~~~~~-~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
|+.+.. .+....+.+|+.+.|.|.+. |.|.|.+.|+|++....... ....+++|.|.+++.+|+|.|+|.|.|..
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 85 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR---AMDFNGILTIRNVQPSDAGTYVCTGSNMF 85 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT---EEEETTEEEECSCCGGGCEEEEEEEECSS
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce---eecCCCEEEEeCCChhhCEEEEEEecCCC
Confidence 444444 34566889999999999998 68999999999854433322 23456799999999999999999999999
Q ss_pred ceeeEEEEEEEe
Q psy10160 207 TSDENAVTIRVE 218 (558)
Q Consensus 207 G~~~~~~~l~V~ 218 (558)
|.....+.|.|.
T Consensus 86 g~~~~~~~l~V~ 97 (98)
T 1gl4_B 86 AMDQGTATLHVQ 97 (98)
T ss_dssp CEEEEEEEEEEC
T ss_pred CccccEEEEEEe
Confidence 999999998884
No 271
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.42 E-value=1.2e-13 Score=128.59 Aligned_cols=75 Identities=15% Similarity=0.222 Sum_probs=54.6
Q ss_pred eCCCcE-EEEeEee-ccCCCeEEEEECCEEeccCCceEEE------ccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 142 GVGSDI-SIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRI------TESNRLHINQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 142 ~~G~~v-~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~------~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
.+|+.+ .|.|.+. |.|.|.+.|++++....... .... ...++|.|.++..+|.|.|+|.|.|..+.....+
T Consensus 128 ~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~-~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~ 206 (221)
T 3eow_R 128 LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTS-QVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLL 206 (221)
T ss_dssp CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCE-EECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEE
T ss_pred cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccc-eeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEE
Confidence 568888 5999987 89999999998754332211 1000 1123699999999999999999999998776665
Q ss_pred EEEE
Q psy10160 214 TIRV 217 (558)
Q Consensus 214 ~l~V 217 (558)
.|.+
T Consensus 207 ~v~~ 210 (221)
T 3eow_R 207 TVSL 210 (221)
T ss_dssp EECC
T ss_pred EEEE
Confidence 5544
No 272
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.42 E-value=4.9e-13 Score=125.93 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=93.4
Q ss_pred CcEEEec----CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc---eEEEccCCeEEEccCCCCCCeEEEEE
Q psy10160 129 PVKVNIT----LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV---HYRITESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 129 p~~~~~~----~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
+|.+..+ +....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..... ......+++|.|.+++.+|+|.|+|.
T Consensus 11 ~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 90 (241)
T 3grw_A 11 APYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCV 90 (241)
T ss_dssp CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEE
Confidence 5555433 3467789999999999999999999999999998865321 12234456899999999999999999
Q ss_pred EEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccc
Q psy10160 202 ASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIK 271 (558)
Q Consensus 202 a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~ 271 (558)
+.|..|.....+.|.|......+.......... ..+..| ......|.+.+.|++.+.|++
T Consensus 91 ~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~-------~~~~~g---~~v~L~C~~~~~p~p~v~W~~ 150 (241)
T 3grw_A 91 VENKFGSIRQTYTLDVLERSPHRPILQAGLPAN-------QTAVLG---SDVEFHCKVYSDAQPHIQWLK 150 (241)
T ss_dssp EEETTEEEEEEEEEEEECCCCCCCEEEECTTCS-------EECCTT---CCEEEEEEEECSSCCEEEEEE
T ss_pred EeecCCceEEEEEEEEeccCCCCceeecCCCcc-------ceecCC---CEEEEEEEEecCCCCEEEEEE
Confidence 999999998889999875432111110000010 112223 333355556689999999999
No 273
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.42 E-value=4.1e-12 Score=125.68 Aligned_cols=125 Identities=10% Similarity=0.197 Sum_probs=78.2
Q ss_pred ceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEEEc-c------CCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYRIT-E------SNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~-~------~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
...+.+|+.+.|.|.+.|.|+| .+.|+|+|..+......+... . .+.|.|.....+|.|.|+|.|.|..|.
T Consensus 126 ~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 126 AARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred ccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 4567899999999999999877 899999999886533221111 1 125778777777789999999999876
Q ss_pred e---eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--cccccchhhhhh
Q psy10160 209 D---ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGPHIKRAVEAE 277 (558)
Q Consensus 209 ~---~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~w~~~~l~~~ 277 (558)
. ..+..+.+. ...+|.+. .....+..|....+. |.+.|.+++ .+.|++++....
T Consensus 206 ~~~~~~~~~~~~~-v~~~P~i~-----------~~~~~~~~G~~v~l~---C~~~g~~p~~~~v~W~k~g~~l~ 264 (327)
T 2wng_A 206 GDPLRGTANLSET-IRVPPTLE-----------VTQQPVRAENQVNVT---CQVRKFYPQRLQLTWLENGNVSR 264 (327)
T ss_dssp SCCEEEEEEGGGT-BCBCCEEE-----------EEEECCSSTTCCEEE---EEEEEEBSSCEEEEEEETTEEEE
T ss_pred CCcccceEEeccc-cCCCCEEE-----------EecCCcCCCCcEEEE---EEEccccCCCcEEEEEECCeEcc
Confidence 3 233333221 11222211 111113344444444 445575444 799999976654
No 274
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.42 E-value=1.2e-12 Score=128.74 Aligned_cols=171 Identities=10% Similarity=-0.043 Sum_probs=102.3
Q ss_pred eeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEee-ccCCCeEEEEECCEEeccCCceEEEccC------CeEEEcc
Q psy10160 117 YLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVD-GYPIPQVFWYKDGQVIENDGVHYRITES------NRLHINQ 189 (558)
Q Consensus 117 ~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~-g~P~p~i~W~~~g~~l~~~~~~~~~~~~------~sL~I~~ 189 (558)
.......+.+..+|.+...+....+..|+.+.+.|.+. |+|.|.+.|++++..+.... ......+ +.|.|.+
T Consensus 105 ~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~s~l~i~~ 183 (313)
T 4fqp_A 105 SRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTS-QVPGFLSGTVTVTSLWILVP 183 (313)
T ss_dssp EEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEE-EEECSSTTCEEEEEEEEECC
T ss_pred ceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccc-eeeeecccccccceeeeecc
Confidence 33334444455667666666666778899999999864 78999999999987765422 2222222 2588999
Q ss_pred CCCCCCeEEEEEEEeCCceee--EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-c
Q psy10160 190 ANATDSGEYRCVASNSYTSDE--NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS-Y 266 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~~--~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~-~ 266 (558)
+..+|+|.|+|.|.|..+... ..+.|.|..+| .+...+ ....... - +......|.+.|.|+| .
T Consensus 184 ~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P---~v~~~~--~~~~~~~------~---g~~v~l~C~~~g~P~p~~ 249 (313)
T 4fqp_A 184 SSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPP---EVSISG--YDNNWYL------G---QNEATLTCDARSNPEPTG 249 (313)
T ss_dssp CGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEE---EEEEEC--CCSCEET------T---CCCEEEEEEEEEESCCCE
T ss_pred cccccCeeEEEEEEccCcCccceeeeecccccCC---cccccc--ccceeec------C---CCeEEEEEEecCCCCCcE
Confidence 999999999999999877654 44555554332 211000 0111111 1 2333455666689998 5
Q ss_pred ccccchhhhhhhhhhhhhhcccccchhhhhhhHHHhhc
Q psy10160 267 GPHIKRAVEAEAAAADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 267 ~~w~~~~l~~~~~~~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
+.|++++..+.... ....+...+..+.....|.|..
T Consensus 250 v~W~~~~~~l~~~~--~~~~~~L~i~~v~~~d~G~Y~C 285 (313)
T 4fqp_A 250 YNWSTTMGPLPPFA--VAQGAQLLIRPVDKPINTTLIC 285 (313)
T ss_dssp EEEEETTBSCCTTE--EEETTEEEECCCSSCCEEEEEE
T ss_pred EEEEECCEECCCce--EEeCCEEEECcCChhhCEEEEE
Confidence 89999976543222 1111233444444454554443
No 275
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.3e-13 Score=110.23 Aligned_cols=90 Identities=21% Similarity=0.394 Sum_probs=71.3
Q ss_pred CcEEEecCCc---eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEE
Q psy10160 129 PVKVNITLET---QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 129 p~~~~~~~~~---~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a 202 (558)
||.+...+.. ..+.+|+.+.|.|.+.|.|.| +.|+|++..+..+. ++.+..+ .+|.|.+++.+|+|.|+|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESE-LLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBT-TBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCC-CEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 5555555665 678999999999999999999 99999999887654 4444332 36999999999999999999
Q ss_pred EeCCceeeEEEEEEEeccCCCC
Q psy10160 203 SNSYTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~~~~~~p 224 (558)
.|..+ .+.|.|..++.+|
T Consensus 85 ~n~~~----~~~l~V~~~P~pp 102 (104)
T 2e6p_A 85 EGVSA----FFGVTVQDPSGPS 102 (104)
T ss_dssp SSCCC----CEEEEEECCCCSS
T ss_pred CCceE----EEEEEEcCCCCCc
Confidence 99744 6677787666444
No 276
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.42 E-value=8.6e-13 Score=120.97 Aligned_cols=127 Identities=16% Similarity=0.206 Sum_probs=84.6
Q ss_pred EecCCceE-eeCCCcEEEEeEeeccCCCeEEEEECC-EEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 133 NITLETQV-FGVGSDISIPCDVDGYPIPQVFWYKDG-QVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 133 ~~~~~~~~-v~~G~~v~L~C~~~g~P~p~i~W~~~g-~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+.+.. +.+|+.+.|.|.+.|.|.|.+.|++.. ..+ .+.......+++|.|.+++.+|+|.|+|.|.|..|..+
T Consensus 4 ~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~ 81 (202)
T 1vca_A 4 ETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLE 81 (202)
T ss_dssp EEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEE
T ss_pred EECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEe
Confidence 34445544 459999999999999999999999843 222 11111222345799999999999999999999999888
Q ss_pred EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC---Ccccccchhhhh
Q psy10160 211 NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP---SYGPHIKRAVEA 276 (558)
Q Consensus 211 ~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~---~~~~w~~~~l~~ 276 (558)
..+.|.|..++..+.... . ..+..|.... ..|.+.|.++ +.+.|++++..+
T Consensus 82 ~~~~l~V~~~p~~~~~~~-----~-------~~~~~G~~~~---L~C~~~~~~p~~~~~i~W~k~~~~l 135 (202)
T 1vca_A 82 KGIQVEIYSFPKDPEIHL-----S-------GPLEAGKPIT---VKCSVADVYPFDRLEIDLLKGDHLM 135 (202)
T ss_dssp EEEEEEEEBCCSCCEEEE-----S-------SCEETTSCEE---EEEEEEEEBSGGGEEEEEEETTEEE
T ss_pred eEEEEEEEeCCCCCEeCC-----c-------eEEcCCCCEE---EEEEECCcCCCCCeEEEEEeCCeEC
Confidence 899999976542221110 0 1123333344 4455545443 368999997543
No 277
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.42 E-value=7e-13 Score=122.07 Aligned_cols=163 Identities=18% Similarity=0.295 Sum_probs=108.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc----eEEEccCCeE-----EEccCCCCCCeEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV----HYRITESNRL-----HINQANATDSGEY 198 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~----~~~~~~~~sL-----~I~~v~~~D~G~Y 198 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..... ......++.+ .|.+++.+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 578888888999999999999999999999999999999998864321 2223344444 4456789999999
Q ss_pred EEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccccchhhhh
Q psy10160 199 RCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 199 ~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w~~~~l~~ 276 (558)
+|.+.|..|.. +..+.|.|...+ +.+...+ ....+ .. +......|.+ .+.|++.+.|++++...
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~~~--~~~~~~~---~~~~~------~~---g~~~~l~C~~~~~~p~~~v~W~~~~~~l 153 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAILR--DDFRQNP---SDVMV------AV---GEPAVMECQPPRGHPEPTISWKKDGSPL 153 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECEEC--SSCSBCC---CCEEE------ET---TSCEEEECBCCCEESCCEEEEEETTEEE
T ss_pred EEEEECCCCceeecceEEEEEecc--ccceeCC---CceEe------cC---CCcEEEEEecCCCCCCCEEEEEECCccC
Confidence 99999999876 456777775432 1111111 11111 12 3334466776 68999999999987655
Q ss_pred hhhh-hhhhhcccccchhhhhhhHHHhhc
Q psy10160 277 EAAA-ADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 277 ~~~~-~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
.... ......+...+..+.....|.|..
T Consensus 154 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 182 (212)
T 2v9r_A 154 DDKDERITIRGGKLMITYTRKSDAGKYVC 182 (212)
T ss_dssp CTTSTTEEEETTEEEESSCCGGGCEEEEE
T ss_pred CCCcceEEccCCeEEEeeCCHhhCeeEEE
Confidence 4332 212223445555566666665554
No 278
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.42 E-value=2.4e-13 Score=106.88 Aligned_cols=84 Identities=27% Similarity=0.510 Sum_probs=64.3
Q ss_pred eCcEEEecCCceEe--eCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEE
Q psy10160 128 VPVKVNITLETQVF--GVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVA 202 (558)
Q Consensus 128 ~p~~~~~~~~~~~v--~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a 202 (558)
.|+.+..++.+..+ .+|+.+.|.|.+.+ |.|.+.|+|+|.++..++ ++.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~-~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESD-FVVLENEGPHRRLVLPATQPSDGGEFQCVA 80 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCS-SCEEEEETTEEEEEESSCCGGGCSEEEEEC
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeee-eeeEEecCCeEEEEeCCCChhhcEEEEEEE
Confidence 46666555555544 68999999999976 889999999999997754 55554443 7999999999999999998
Q ss_pred EeCCceeeEEEEEEE
Q psy10160 203 SNSYTSDENAVTIRV 217 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V 217 (558)
.|. +.++.|.|
T Consensus 81 ~n~----~~~~~ltV 91 (91)
T 2lvc_A 81 GDE----CAYFTVTI 91 (91)
T ss_dssp SSC----EEEEEEEC
T ss_pred cce----EEEEEEEC
Confidence 664 45555543
No 279
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.42 E-value=9.1e-13 Score=124.15 Aligned_cols=70 Identities=20% Similarity=0.405 Sum_probs=51.5
Q ss_pred CCceEeeCCCcEEEEeEeeccCC--CeEEEEEC--CEEec----------------cCCceEEEccC-----CeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPI--PQVFWYKD--GQVIE----------------NDGVHYRITES-----NRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~--g~~l~----------------~~~~~~~~~~~-----~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.|.|. |.+.|+|+ +..+. ....++.+..+ .+|.|.++
T Consensus 126 ~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 205 (240)
T 1moe_A 126 SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSL 205 (240)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcC
Confidence 44567889999999999999874 58999995 22210 01124554322 37999999
Q ss_pred CCCCCeEEEEEEEeC
Q psy10160 191 NATDSGEYRCVASNS 205 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~ 205 (558)
+.+|+|.|+|.|.+.
T Consensus 206 ~~~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 206 TSEDTAVYYCAPFGY 220 (240)
T ss_dssp CGGGCEEEEEEECST
T ss_pred CHHHCEEEEEEEEec
Confidence 999999999999853
No 280
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.41 E-value=2e-14 Score=120.40 Aligned_cols=97 Identities=25% Similarity=0.334 Sum_probs=79.9
Q ss_pred ceeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCe-EEEEECCEEeccC-CceEEEc----c---CCeEEEccCCCCC
Q psy10160 124 GGYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQ-VFWYKDGQVIEND-GVHYRIT----E---SNRLHINQANATD 194 (558)
Q Consensus 124 ~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~-i~W~~~g~~l~~~-~~~~~~~----~---~~sL~I~~v~~~D 194 (558)
+.+..||.+.. +....+.+|+.+.|.|.+.|.|.|. +.|++++..+... ..++.+. . ..+|.|.+++.+|
T Consensus 9 l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (122)
T 2cry_A 9 LTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRAD 87 (122)
T ss_dssp CCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHHH
T ss_pred EEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChhh
Confidence 34456788777 7778889999999999999999997 9999999888752 2355442 1 2379999999999
Q ss_pred C-eEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 195 S-GEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 195 ~-G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
. |.|+|.|.|..|.....+.|.|.++.
T Consensus 88 ~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 88 FQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp HHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred CCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 9 99999999999999999999987543
No 281
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=2.8e-13 Score=110.18 Aligned_cols=87 Identities=16% Similarity=0.307 Sum_probs=72.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+.+..+.+|+.+.|.|.+.+.|.| +.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSK-RITISHVGRFHKLVIDDVRPEDEGDYTFVPDG 84 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCS-SCEEEEETTEEEEEESSCCTTTCSCEEEEEET
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCC-CEEEEEeCCEEEEEECCCCcCCCEEEEEEEcc
Confidence 47788888889999999999999999999988 99999999887654 55554444 799999999999999999999
Q ss_pred CCceeeEEEEEEEe
Q psy10160 205 SYTSDENAVTIRVE 218 (558)
Q Consensus 205 ~~G~~~~~~~l~V~ 218 (558)
. ..+..+.|.|.
T Consensus 85 ~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 85 Y--ALSLSAKLNFL 96 (106)
T ss_dssp S--CCCCCBCEEEE
T ss_pred C--CceEEEEEEEE
Confidence 8 44455566665
No 282
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.41 E-value=2e-13 Score=126.42 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=48.3
Q ss_pred EeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEEEccCCeEEE---ccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 140 VFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYRITESNRLHI---NQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~sL~I---~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
.+.+|+.++|.|.+.|.|++ .+.|++++..+...........++.+.+ ..+...| |.|+|.|.|..|.......
T Consensus 131 ~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 131 GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 45679999999999997544 4779999875432211222334555555 5577778 9999999999987766555
Q ss_pred EE
Q psy10160 215 IR 216 (558)
Q Consensus 215 l~ 216 (558)
|.
T Consensus 210 l~ 211 (215)
T 3nl4_H 210 VA 211 (215)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 283
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.41 E-value=1.3e-12 Score=103.87 Aligned_cols=83 Identities=23% Similarity=0.391 Sum_probs=70.2
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
.+....+.+|+.+.|.|.+.| .|.+.|+|+|..+.... ++.+ .+++|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~-~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 82 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNN-RTVL-IGEYLQIKGATPRDSGLYACTAARTVDSETWIFM 82 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCS-SEEE-ETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCc-eEEE-eCCEEEECcCCcccCEEEEEEEccCCCcEEEEEE
Confidence 455677899999999999987 57999999999987654 5544 3578999999999999999999999999999999
Q ss_pred EEEeccC
Q psy10160 215 IRVEGIF 221 (558)
Q Consensus 215 l~V~~~~ 221 (558)
|.|.++.
T Consensus 83 l~V~~~~ 89 (95)
T 4hwu_A 83 VNVTDAA 89 (95)
T ss_dssp EEECCC-
T ss_pred EEEeCCc
Confidence 9996553
No 284
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.40 E-value=9.8e-13 Score=124.28 Aligned_cols=67 Identities=19% Similarity=0.340 Sum_probs=50.4
Q ss_pred eEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEec------c---------CCceEEEcc-----CCeEEEccCCCCC
Q psy10160 139 QVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIE------N---------DGVHYRITE-----SNRLHINQANATD 194 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~------~---------~~~~~~~~~-----~~sL~I~~v~~~D 194 (558)
..+.+|+.++|.|.+.|.| .|.+.|+|+ +..+. . ...++.+.. ..+|.|.+++.+|
T Consensus 132 ~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 211 (242)
T 2znx_A 132 SLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 211 (242)
T ss_dssp SEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGG
T ss_pred ceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCc
Confidence 4588999999999999986 478999984 22220 0 123555432 1389999999999
Q ss_pred CeEEEEEEEeC
Q psy10160 195 SGEYRCVASNS 205 (558)
Q Consensus 195 ~G~Y~C~a~N~ 205 (558)
+|.|+|.|.|.
T Consensus 212 ~G~Y~C~a~~~ 222 (242)
T 2znx_A 212 TATYYCANXDG 222 (242)
T ss_dssp CEEEEEEETTS
T ss_pred CEEEEEeccCC
Confidence 99999999984
No 285
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=2.9e-13 Score=109.62 Aligned_cols=90 Identities=17% Similarity=0.222 Sum_probs=73.8
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.|+.+...+.+..+.+|+.+.|.|.+.+.|.| .+.|+|+|..+..++ ++.+..++ +|.|.+++.+|+|.|+|.|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~-r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 85 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSS-RFQATRQGRKYILVVREAAPSDAGEVVFSVR 85 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCS-SCEEEEETTEEEEEECSCCTTTCSCEEEEET
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCC-CEEEEEcCCEEEEEECCCCHHHCEEEEEEEC
Confidence 45667777888999999999999999998854 799999999987654 55554433 79999999999999999984
Q ss_pred eCCceeeEEEEEEEeccCC
Q psy10160 204 NSYTSDENAVTIRVEGIFI 222 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~ 222 (558)
| ...++.|.|.+++.
T Consensus 86 ~----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 86 G----LTSKASLIVRERSG 100 (104)
T ss_dssp T----EEEEECEEEECCCS
T ss_pred C----eeEEEEEEEeCCCc
Confidence 4 56788899987653
No 286
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=6.8e-13 Score=107.21 Aligned_cols=92 Identities=20% Similarity=0.266 Sum_probs=77.8
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|. .+.|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASG-KHQPSQEGLTLRLTISALEKADSDTYTCD--- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSS-SEEEEEETTEEEEEEESCCTTTCSEEEEE---
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCC-eEEEEeCCCEEEEEECCCCcccCEEEEEE---
Confidence 4677777888899999999999999 589999999999999887654 66666555 899999999999999998
Q ss_pred CCceeeEEEEEEEeccCCCCC
Q psy10160 205 SYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~~~p~ 225 (558)
.|.....+.|.|.+.+.+|.
T Consensus 82 -~g~~~~~~~l~V~~~p~~p~ 101 (103)
T 2dku_A 82 -IGQAQSRAQLLVQGRRSGPS 101 (103)
T ss_dssp -CSSCBCCEEEEEECSCCCCS
T ss_pred -eCCceEEEEEEEeCccCCCC
Confidence 67777888999987775554
No 287
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.40 E-value=7.5e-13 Score=107.80 Aligned_cols=92 Identities=13% Similarity=0.215 Sum_probs=72.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCE-Eecc------CCceEEEc----cCCeEEEccCCCCCCe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQ-VIEN------DGVHYRIT----ESNRLHINQANATDSG 196 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~-~l~~------~~~~~~~~----~~~sL~I~~v~~~D~G 196 (558)
.+|.+...+....+.+|+.+.|.|.+.+.|.|.+.|++++. .+.. .+.++.+. .+.+|.|.+++.+|+|
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 34556667788899999999999999999999999999875 2221 12255443 3458999999999999
Q ss_pred EEEEEEEeCCceeeEEEEEEEecc
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
.|+|.+.| .|..+..+.|.|.++
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~~ 107 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLGV 107 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEECC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEcC
Confidence 99999999 888889999999654
No 288
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.40 E-value=2.2e-12 Score=122.92 Aligned_cols=89 Identities=17% Similarity=0.304 Sum_probs=62.1
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EE---ec---c--------CCceEEEcc----CCeEEEc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QV---IE---N--------DGVHYRITE----SNRLHIN 188 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~---l~---~--------~~~~~~~~~----~~sL~I~ 188 (558)
++.+...+....+.+|+.++|.|.+.+. .|.+.|+|.. .. +. . ...++.+.. ..+|.|.
T Consensus 137 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 215 (256)
T 3tf7_C 137 EAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLE 215 (256)
T ss_dssp -CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEES
T ss_pred ccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEEC
Confidence 4556666777788899999999999987 7899999832 11 10 0 012333222 2379999
Q ss_pred cCCCCCCeEEEEEEEeCCceee--EEEEEEEe
Q psy10160 189 QANATDSGEYRCVASNSYTSDE--NAVTIRVE 218 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~~--~~~~l~V~ 218 (558)
+++.+|+|.|+|.|.|..|... .-..|.|.
T Consensus 216 ~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~ 247 (256)
T 3tf7_C 216 SASPSQTSLYFCASSDAPGQLYFGEGSKLTVL 247 (256)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCHHHCEEEEEEecCCCCccEECCCeEEEEE
Confidence 9999999999999999877552 33455554
No 289
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.40 E-value=2.1e-12 Score=121.16 Aligned_cols=76 Identities=14% Similarity=0.299 Sum_probs=54.3
Q ss_pred eeCC-CcEEEEeEeecc-CCC-eEEEEE-CCEEecc--------CCceEEEccCCeEEEccCCC--CCCeEEEEEEEeCC
Q psy10160 141 FGVG-SDISIPCDVDGY-PIP-QVFWYK-DGQVIEN--------DGVHYRITESNRLHINQANA--TDSGEYRCVASNSY 206 (558)
Q Consensus 141 v~~G-~~v~L~C~~~g~-P~p-~i~W~~-~g~~l~~--------~~~~~~~~~~~sL~I~~v~~--~D~G~Y~C~a~N~~ 206 (558)
+..| +.+.|.|.+.|. |.| .+.|++ +|..+.. .+..|.. .++|.|.+... +|.|.|+|.|.|..
T Consensus 137 ~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~~~d~g~ytC~v~n~~ 214 (232)
T 1dn0_B 137 SPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA--TSQVLLPSKDVMAGTDEHVVCKVQHPN 214 (232)
T ss_dssp ----CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEE--EEEEEECTTCC---CCCEEEEEEECTT
T ss_pred cCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEE--EEEEEEcHHHhcccCCCeEEEEEEeCC
Confidence 4478 999999999986 887 899999 8877643 0112322 24689988887 89999999999999
Q ss_pred ceeeEEEEEEEe
Q psy10160 207 TSDENAVTIRVE 218 (558)
Q Consensus 207 G~~~~~~~l~V~ 218 (558)
+.......+.|.
T Consensus 215 ~~~~~~~~i~~~ 226 (232)
T 1dn0_B 215 GNKEKNVPLPVI 226 (232)
T ss_dssp CCEEEEEECCC-
T ss_pred CCcceeEecCCC
Confidence 987766666554
No 290
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.39 E-value=4.7e-13 Score=124.96 Aligned_cols=67 Identities=18% Similarity=0.351 Sum_probs=49.7
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
+.+|+.+.|.|.+.|. |.| .+.|++++..+.. .+..|.. .+.|.|.++..+| |.|+|.|.|..+...
T Consensus 140 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 140 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEE--EEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred ccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEE--EEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 4679999999999987 777 8999999865321 1112211 1358999999889 999999999766543
No 291
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.39 E-value=7.2e-13 Score=110.03 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=70.5
Q ss_pred eeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEc-----cCCeEEEccCCCCCCeEEE
Q psy10160 126 YLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRIT-----ESNRLHINQANATDSGEYR 199 (558)
Q Consensus 126 ~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~-----~~~sL~I~~v~~~D~G~Y~ 199 (558)
+..||.+...... . ..+...|.|.+.|+|.|.+.|+|+|..+..+.. ++... .+++|.|.+++.+|+|.|+
T Consensus 5 V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 81 (118)
T 1wwc_A 5 VYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYT 81 (118)
T ss_dssp CCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEE
T ss_pred EecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEE
Confidence 3356655433222 1 236678999999999999999999999876542 22211 2458999999999999999
Q ss_pred EEEEeCCceeeEEEEEEEeccC
Q psy10160 200 CVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 200 C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
|.|.|..|....++.|.|...|
T Consensus 82 C~a~N~~G~~~~~~~l~v~~~P 103 (118)
T 1wwc_A 82 LIAKNPLGTANQTINGHFLKEP 103 (118)
T ss_dssp EEEEETTEEEEEEEEECCSCCC
T ss_pred EEEECCCCeEeeEEEEEEccCC
Confidence 9999999999999999886543
No 292
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.39 E-value=7.6e-13 Score=121.43 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=95.3
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec-----------cCCceEEEccCCeEEEccCCCCCCeE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE-----------NDGVHYRITESNRLHINQANATDSGE 197 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~-----------~~~~~~~~~~~~sL~I~~v~~~D~G~ 197 (558)
++.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+. ....++... +++|.|.+++.+|+|.
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL-PTGITFKSVTREDTGT 82 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE-TTEEECSCCCTTSCSE
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee-ccEEEEeeCCHHHCcE
Confidence 4566677788889999999999999999999999999875521 112234433 3789999999999999
Q ss_pred EEEEEEeCCc--eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccccchhh
Q psy10160 198 YRCVASNSYT--SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPHIKRAV 274 (558)
Q Consensus 198 Y~C~a~N~~G--~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w~~~~l 274 (558)
|+|.+.|..| ..+..+.|.|..++..+.... .. .+ .. +......|.+ .+.|+|.+.|++++.
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~-----~~-~~------~~---g~~~~l~C~~~~~~p~~~v~W~~~~~ 147 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNI-----PS-SA------TI---GNRAVLTCSEQDGSPPSEYTWFKDGI 147 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCCCCCCC-----BS-EE------ET---TSCEEECCCCCSCBSCCEEEEEETTC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcCCCccc-----cc-ce------ec---CCEEEEEEeCCCCCCCceeEEEECCe
Confidence 9999999966 345677788865543333221 11 11 22 3334467775 789999999999976
Q ss_pred hhh
Q psy10160 275 EAE 277 (558)
Q Consensus 275 ~~~ 277 (558)
...
T Consensus 148 ~~~ 150 (209)
T 1nbq_A 148 VMP 150 (209)
T ss_dssp CCC
T ss_pred eCC
Confidence 544
No 293
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.39 E-value=1.7e-12 Score=106.89 Aligned_cols=87 Identities=20% Similarity=0.450 Sum_probs=73.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.+. |.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 92 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGD-RHSLRQDGARCELQIRGLVAEDAGEYLCMC-- 92 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSS-SEEEEEETTEEEEEECSCCSTTCEEEEEEE--
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCC-cEEEEECCCEEEEEECCCChhhCEEEEEEe--
Confidence 46678788888899999999999999875 7899999999887654 66666555 7999999999999999999
Q ss_pred CCceeeEEEEEEEeccC
Q psy10160 205 SYTSDENAVTIRVEGIF 221 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~ 221 (558)
|.....+.|.|.+++
T Consensus 93 --~~~~~~~~l~V~~~p 107 (113)
T 2edh_A 93 --GKERTSAMLTVRAMP 107 (113)
T ss_dssp --TTEEEEEEEEECCCC
T ss_pred --CCCCEEEEEEEeCCC
Confidence 777888999997654
No 294
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.39 E-value=2.3e-12 Score=119.20 Aligned_cols=135 Identities=19% Similarity=0.342 Sum_probs=96.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC---CceEEEccCCeE----EEccCCCCCCeEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND---GVHYRITESNRL----HINQANATDSGEYRC 200 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~---~~~~~~~~~~sL----~I~~v~~~D~G~Y~C 200 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+... ..++.. .++.+ .|.+++.+|+|.|+|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQF-KDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEEC-TTSCEEESSCCBSSSCBCCEEEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEe-cCCceEEEEEeccCCcccCceEEE
Confidence 5788888888999999999999999999999999999999988754 223332 33433 688899999999999
Q ss_pred EEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccccchhhhhh
Q psy10160 201 VASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPHIKRAVEAE 277 (558)
Q Consensus 201 ~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w~~~~l~~~ 277 (558)
.+.|..|.. +..+.|.|...+ |.+...+ ....+ .. +......|.+ .|.|++.+.|++++....
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~~~--~~~~~~~---~~~~~------~~---g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAVLR--DDFRVEP---KDTRV------AK---GETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp EEEETTEEEECCCEEEEECEEC--CSCSBCC---CCEEE------CT---TSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred EEecCCCccccccceEEEEEeC--CCcEECC---CccEE------cC---CCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 999999876 345666665322 2222111 11111 12 3334467776 689999999999876544
No 295
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.38 E-value=1.3e-12 Score=123.73 Aligned_cols=68 Identities=19% Similarity=0.384 Sum_probs=50.7
Q ss_pred ceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEe------cc----------CCceEEEcc-----CCeEEEccCCC
Q psy10160 138 TQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVI------EN----------DGVHYRITE-----SNRLHINQANA 192 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l------~~----------~~~~~~~~~-----~~sL~I~~v~~ 192 (558)
...+.+|+.++|.|.+.+.| .|.+.|+|++ ..+ .. ...++.+.. ..+|.|.+++.
T Consensus 136 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 215 (247)
T 1svz_A 136 PELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN 215 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG
T ss_pred ceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh
Confidence 34588999999999999985 5689999963 211 00 023554432 23899999999
Q ss_pred CCCeEEEEEEEeC
Q psy10160 193 TDSGEYRCVASNS 205 (558)
Q Consensus 193 ~D~G~Y~C~a~N~ 205 (558)
+|+|.|.|.|.|.
T Consensus 216 ~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 216 EDTATYFCVRDRH 228 (247)
T ss_dssp GGCEEEEEEEEEG
T ss_pred hHCEEEEEEEecc
Confidence 9999999999995
No 296
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.38 E-value=6.2e-13 Score=130.33 Aligned_cols=129 Identities=10% Similarity=0.125 Sum_probs=83.2
Q ss_pred ecCCceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccCCceEE---EccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 134 ITLETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIENDGVHYR---ITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~~~~~~---~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
..+.......|+.+.|.|.+ .|.|.|.+.|++++..+......+. ....+.|.|.++..+|+|.|+|.|.|..|..
T Consensus 119 ~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~ 198 (308)
T 4fom_A 119 KGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEK 198 (308)
T ss_dssp ECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred cccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCC
Confidence 34455556678999999975 7899999999999987754211000 0012369999999999999999999988766
Q ss_pred e--EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-cccccchhhhh
Q psy10160 210 E--NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS-YGPHIKRAVEA 276 (558)
Q Consensus 210 ~--~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~-~~~w~~~~l~~ 276 (558)
. .++.|.|..+| .+...+ ........ +......|.+.|.|+| .+.|++++...
T Consensus 199 ~~~~~~~l~V~~~P---~~~~~~--~~~~~~~~---------g~~v~l~C~~~g~P~p~~v~W~k~~~~~ 254 (308)
T 4fom_A 199 DIRYSFILDIQYAP---EVSVTG--YDGNWFVG---------RKGVNLKCNADANPPPFKSVWSRLDGQW 254 (308)
T ss_dssp CEEEEEECCCCEEE---EECCBC--CCSCEETT---------CCSCEEECCEEEESCEEEEECCBSSSCC
T ss_pred ceEEeEEEEEecCC---eeEEcc--cceeeeec---------cccEEEEEEEecCCCCcEEEEEECCeEC
Confidence 4 45556664433 221111 11111111 2223356777789988 58999987544
No 297
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.38 E-value=9.8e-13 Score=123.05 Aligned_cols=72 Identities=18% Similarity=0.304 Sum_probs=51.3
Q ss_pred EeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCC-------ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 140 VFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDG-------VHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~-------~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+.+|+.+.|.|.+.|. |.| .+.|++++..+.... ..|. ..+.|.|.++..+| |.|+|.|.|..|...
T Consensus 141 ~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~--~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~ 217 (228)
T 3bae_H 141 GDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVTSSTWPS-ESITCNVAHPASSTK 217 (228)
T ss_dssp ---CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEE--EEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred cccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEE--EEEEEEEEhhhcCC-CcEEEEEEECCCCCC
Confidence 35689999999999986 888 899999886532110 1121 12468999988866 999999999988765
Q ss_pred EEEE
Q psy10160 211 NAVT 214 (558)
Q Consensus 211 ~~~~ 214 (558)
....
T Consensus 218 ~~~~ 221 (228)
T 3bae_H 218 VDKK 221 (228)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4433
No 298
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.38 E-value=4.2e-12 Score=120.91 Aligned_cols=69 Identities=17% Similarity=0.443 Sum_probs=51.5
Q ss_pred ceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEe------ccC----------CceEEEccC-----CeEEEccCCC
Q psy10160 138 TQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVI------END----------GVHYRITES-----NRLHINQANA 192 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l------~~~----------~~~~~~~~~-----~sL~I~~v~~ 192 (558)
...+.+|+.++|.|.+.+.| .|.+.|+|+ +..+ ... ..++.+..+ .+|.|.+++.
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 222 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRA 222 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCCh
Confidence 44588999999999999977 788999986 3221 000 124544332 2599999999
Q ss_pred CCCeEEEEEEEeCC
Q psy10160 193 TDSGEYRCVASNSY 206 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~ 206 (558)
+|+|.|+|.|.|..
T Consensus 223 ~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 223 EDTAVYYCARYIDF 236 (256)
T ss_dssp GGCEEEEEEEEETT
T ss_pred hhCEEEEEEEEcCC
Confidence 99999999999964
No 299
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.38 E-value=2.3e-13 Score=122.76 Aligned_cols=153 Identities=14% Similarity=0.120 Sum_probs=100.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.+|.+...+.. .+.+|+.++|.|.+.+ |.|.+.|+|++.. ....+++|.|.+++.+|+|.|+|.+.|..|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~--------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 76 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS--------RYQDQAVLFIPAMKRSLAGRYRCSYQNGSL 76 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC--------CEESSSEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc--------ccCcccEEEECcCChhhCceEEEEEEcCCC
Confidence 46777777765 7899999999999998 8889999999865 123567899999999999999999999887
Q ss_pred ee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhh
Q psy10160 208 SD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKR 285 (558)
Q Consensus 208 ~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~ 285 (558)
.. +..+.|.|.+...+|.+...+ ...+..|....+.|. +.+. ++.+.|++++............
T Consensus 77 ~~~~s~~~~l~V~~~~~~p~i~~~p----------~~~v~~G~~v~l~C~---~~~~-~~~~~w~k~g~~~~~~~~~~~~ 142 (184)
T 2gi7_A 77 WSLPSDQLELVATGVFAKPSLSAQP----------GPAVSSGGDVTLQCQ---TRYG-FDQFALYKEGDPAPYKNPERWY 142 (184)
T ss_dssp EBCCCCCEEEEEESSSCCCEEEEEC----------CCSSCCTTCEEEEEE---CSSC-CCEEEEEECCCCTTSCCCCEEE
T ss_pred ccCCCCCEEEEecCcCCCCEEEeCC----------CceecCCCcEEEEEE---cCCC-CcEEEEEECCCcCcceecCCCc
Confidence 43 456778886544333322111 112233444454554 4344 4689999997554321111222
Q ss_pred cccccchhhhhhhHHHhhc
Q psy10160 286 RSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 286 ~grth~q~a~~~t~g~~~~ 304 (558)
.+..++..+.+...|.|..
T Consensus 143 ~~~L~i~~v~~~D~G~Y~C 161 (184)
T 2gi7_A 143 RASFPIITVTAAHSGTYRC 161 (184)
T ss_dssp EESSSEEEETTCCSEEEEE
T ss_pred eEEEEEccCCccCCeEEEE
Confidence 3445555666666666654
No 300
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.37 E-value=2.2e-12 Score=103.57 Aligned_cols=88 Identities=23% Similarity=0.326 Sum_probs=72.2
Q ss_pred eCcEEEecCCc-eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLET-QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+|.+...+.+ ..+.+|+.+.|.|.+. .|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPST-KYIFEHKGCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBT-TEEEEEETTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCC-CEEEEecCCEEEEEEcCCCcCcCEEEEEEE-
Confidence 36667666665 6788999999999998 7999999999999887654 55554433 6999999999999999999
Q ss_pred eCCceeeEEEEEEEeccC
Q psy10160 204 NSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~ 221 (558)
|....++.|.|.++|
T Consensus 83 ---g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ---GDEKCSTELFVRSGP 97 (100)
T ss_dssp ---TTEEEEEEEEECCSC
T ss_pred ---CCceEEEEEEEecCC
Confidence 777888999997654
No 301
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.37 E-value=4.6e-13 Score=106.70 Aligned_cols=84 Identities=29% Similarity=0.521 Sum_probs=69.8
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.++.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+... .+++|.|.+++.+|+|.|+|.|.|..|
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 81 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLP-------PSPVLILPEIGPQDQGTYSCVATHSSH 81 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSC-------CCSEEEEESCCTTTCEEEECEECCSSC
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCC-------CCCEEEECCCCcccCEEEEEEEEeCCC
Confidence 3566777787888999999999999999999999999999877643 346899999999999999999999766
Q ss_pred ee--eEEEEEEEe
Q psy10160 208 SD--ENAVTIRVE 218 (558)
Q Consensus 208 ~~--~~~~~l~V~ 218 (558)
.. +..+.|.|.
T Consensus 82 ~~~~s~~~~v~V~ 94 (96)
T 2ens_A 82 GPQESRAVSISII 94 (96)
T ss_dssp CCEECCCEEEEEC
T ss_pred CcEEEEEEEEEEe
Confidence 54 455666664
No 302
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.37 E-value=1.9e-13 Score=126.90 Aligned_cols=163 Identities=10% Similarity=-0.004 Sum_probs=104.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEE-EccCC--eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYR-ITESN--RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~-~~~~~--sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.+|.+...+. ..+.+|+.++|.|.+.+ |.|.+.|+|+|..+........ ...++ +|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 85 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRI 85 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEc
Confidence 4566766666 47899999999999988 7889999999876543221111 12345 899999999999999999999
Q ss_pred CCcee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhh
Q psy10160 205 SYTSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAAD 282 (558)
Q Consensus 205 ~~G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~ 282 (558)
..|.. +..+.|.|.+....|.+...+ . ..+..|....+.|. ..+.+++.+.|++++.........
T Consensus 86 ~~~~~~~s~~~~l~V~~~~~~P~i~~~p---~-------~~v~~G~~v~L~C~---~~~~~~~~~~W~k~g~~~~~~~~~ 152 (218)
T 1uct_A 86 GHYRFRYSDTLELVVTGLYGKPFLSADR---G-------LVLMPGENISLTCS---SAHIPFDRFSLAKEGELSLPQHQS 152 (218)
T ss_dssp TTTEEEECCCEEEEEECSSCCCEEEESS---C-------SEECTTCCCEEEEE---CSSSCCSEEEEEETTCSSCCSEEE
T ss_pred CCCceeecCCEEEEEcCcccCCEEEeCC---C-------CccCCCCCEEEEEe---CCCCCCCEEEEEECCCcccccccC
Confidence 87643 355778887644333332111 1 12233444555553 236778889999997544321111
Q ss_pred hhhcccccchhhhhhhHHHhhcc
Q psy10160 283 KKRRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 283 ~~~~grth~q~a~~~t~g~~~~~ 305 (558)
....+..++..+++...|.|.+.
T Consensus 153 ~~~~~~L~I~~v~~~D~G~Y~C~ 175 (218)
T 1uct_A 153 GEHPANFSLGPVDLNVSGIYRCY 175 (218)
T ss_dssp CSSSEEEECCSCCGGGCEEEEEE
T ss_pred CCccCEEEEccCCcccCEEEEEE
Confidence 12234556777777777877664
No 303
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.36 E-value=7.7e-13 Score=120.60 Aligned_cols=162 Identities=13% Similarity=0.102 Sum_probs=100.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceE-EEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHY-RITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+|.+...+.. .+.+|+.++|.|.+.+.|. .+.|+|++..+....... ....+++|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPA 81 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCC
Confidence 35667766664 7889999999999999876 999999998764321100 11234589999999999999999999998
Q ss_pred cee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhh--
Q psy10160 207 TSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAAD-- 282 (558)
Q Consensus 207 G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~-- 282 (558)
|.. +..+.|.|.+.+.+|.+...+ . . .+..|.... ..|.+.+.| +.+.|++++.........
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~i~~~~---~-~------~v~~G~~v~---L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~ 147 (196)
T 2d3v_A 82 GWSEPSDPLELVVTGFYNKPTLSALP---S-P------VVTSGENVT---LQCGSRLRF-DRFILTEEGDHKLSWTLDSQ 147 (196)
T ss_dssp EECBCCCCEEEEEECSSCCCEEEC---------------------CE---EEEEESSCC-SEEEEEEC---CCEEEEECE
T ss_pred CcCCcCccEEEEecCCCCCCeEEccC---C-c------cccCCCcEE---EEEEcCCCC-CEEEEEccCCcccccccccc
Confidence 754 456788887644333332111 1 1 122233334 455565777 889999998665322111
Q ss_pred h----hhcccccchhhhhhhHHHhhcc
Q psy10160 283 K----KRRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 283 ~----~~~grth~q~a~~~t~g~~~~~ 305 (558)
. ...+..++..+++...|.|...
T Consensus 148 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 174 (196)
T 2d3v_A 148 LTPSGQFQALFPVGPVTPSHRWMLRCY 174 (196)
T ss_dssp ECTTSCEEEEEECCCCBTTBCEEEEEE
T ss_pred cccCCCceeEEEeeecCcccCeeEEEE
Confidence 1 1124556667777777766653
No 304
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=2.5e-13 Score=109.38 Aligned_cols=88 Identities=24% Similarity=0.415 Sum_probs=71.0
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc---eEEEccCC---eEEEccCCCCCCeEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV---HYRITESN---RLHINQANATDSGEYRCV 201 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~---~~~~~~~~---sL~I~~v~~~D~G~Y~C~ 201 (558)
.||.+...+.+..+.+|+.+.|.|.+.+.| |.+.|+|+|..+..+.. +|.+..++ +|.|.+++.+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 85 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 467777788889999999999999999999 99999999998876532 44444443 699999999999999999
Q ss_pred EEeCCceeeEEEEEEEecc
Q psy10160 202 ASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 202 a~N~~G~~~~~~~l~V~~~ 220 (558)
|.| ....+.|.|.++
T Consensus 86 a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 86 TNG----GQCEAELIVEEK 100 (101)
T ss_dssp CSS----CEECCBEEEECC
T ss_pred EcC----CcEEEEEEEeCC
Confidence 988 344556777543
No 305
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.36 E-value=1.4e-12 Score=105.46 Aligned_cols=86 Identities=23% Similarity=0.405 Sum_probs=68.1
Q ss_pred eCcEEEecCCc-eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLET-QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+|.|...+.+ ..+.+|+.+.|.|.+ +.|.|.+.|+|+|..+..+..++.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a- 91 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV- 91 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE-
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE-
Confidence 35556555555 789999999999999 78999999999999987763466665555 8999999999999999999
Q ss_pred eCCceeeEEEEEEEe
Q psy10160 204 NSYTSDENAVTIRVE 218 (558)
Q Consensus 204 N~~G~~~~~~~l~V~ 218 (558)
|.....+.|.|.
T Consensus 92 ---~~~~~~~~l~V~ 103 (104)
T 1pd6_A 92 ---GGEKCSTELFVK 103 (104)
T ss_dssp ---TTEEECCEEEEE
T ss_pred ---CCCcEEEEEEEe
Confidence 334555666664
No 306
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.36 E-value=5.2e-13 Score=121.70 Aligned_cols=159 Identities=13% Similarity=0.120 Sum_probs=104.4
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEE--ccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRI--TESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~--~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
+|.+...+.. .+.+|+.++|.|.+.+ |.|.+.|+|++..+.... .... ..+++|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~-~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 5 KPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDR-QNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEE-ECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccc-cccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 5666667766 8899999999999999 778999999998775421 1111 234589999999999999999999999
Q ss_pred ce--eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhh---
Q psy10160 207 TS--DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAA--- 281 (558)
Q Consensus 207 G~--~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~--- 281 (558)
|. .+..+.|.|.+.+.+|.+...+. ..+..|....+.|. +.+ +++.+.|++++........
T Consensus 82 g~~~~s~~~~l~V~~~~~~p~~~~~~~----------~~v~~G~~v~L~C~---~~~-~~~~~~w~k~g~~~~~~~~~~~ 147 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAYSKPTLSALPS----------PLVTSGKSVTLLCQ---SRS-PMDTFLLCKERAAHPLLCLRSE 147 (196)
T ss_dssp EEBCCCCCEEEEEECSSCCCEEEEESC----------SEECTTCCEEEEEE---EEE-EEEEEEEEETTCCCGGGSEEEE
T ss_pred cccCCCccEEEEecCCCCCCEEEeCCc----------ceecCCCeEEEEEe---cCC-CCCEEEEEeCCCcccceeeccc
Confidence 83 35677888876543333322111 12233444555554 434 4568999998754432221
Q ss_pred --hhhhcccccchhhhhhhHHHhhc
Q psy10160 282 --DKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 282 --~~~~~grth~q~a~~~t~g~~~~ 304 (558)
.....+..++..++....|.|..
T Consensus 148 ~~~~~~~~~L~i~~v~~~d~G~Y~C 172 (196)
T 3p2t_A 148 HGAQQHQAEFPMSPVTSVHGGTYRC 172 (196)
T ss_dssp EEEEEEEEEEEECSCCGGGCEEEEE
T ss_pred ccccCcceEEEeCCCcccCCCeEEE
Confidence 11123445666677777776665
No 307
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.36 E-value=1.6e-12 Score=119.60 Aligned_cols=155 Identities=13% Similarity=0.109 Sum_probs=102.5
Q ss_pred cCCceEeeCCCcEEEEeEeeccC----CCeEEEEE----------------CCEEecc----CCceEEEcc------CCe
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP----IPQVFWYK----------------DGQVIEN----DGVHYRITE------SNR 184 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P----~p~i~W~~----------------~g~~l~~----~~~~~~~~~------~~s 184 (558)
++....+.+|+.+.|.|.+.+.| .|.+.|++ ++..+.. ...++.+.. +.+
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 34566789999999999999988 56899998 4444431 022444433 468
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCC
Q psy10160 185 LHINQANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQL 263 (558)
Q Consensus 185 L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~ 263 (558)
|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++..+... . ...+..|.... ..|.+ .|.|
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~-----------~-~~~~~~g~~v~---l~C~~~~g~p 150 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCF-----------V-DGSEEIGNDFK---LKCEPKEGSL 150 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEE-----------E-ESCCBTTCCEE---EEEECSBCCS
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceee-----------e-ecceecCCcEE---EEecCCCCCC
Confidence 9999999999999999999999999999999997554222111 0 11122333333 45555 5899
Q ss_pred CCcccccchhhhhhhhh--hhhhhcccccchhhhhhhHHHhhc
Q psy10160 264 PSYGPHIKRAVEAEAAA--ADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 264 ~~~~~w~~~~l~~~~~~--~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
+|.+.|+++........ ......+..++..+.+...|.|..
T Consensus 151 ~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 193 (214)
T 3jz7_A 151 PLQFEWQKLSDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSC 193 (214)
T ss_dssp SCEEEEEECSTTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEE
T ss_pred CCEEEEEECCCCCccCccceeccCCCEEEEecCCHHHCEEEEE
Confidence 99999999543222221 222334456666666766666654
No 308
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.36 E-value=4.1e-12 Score=117.52 Aligned_cols=97 Identities=22% Similarity=0.414 Sum_probs=81.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC-ceEEEcc---CCeEEEccCCCCCCeEEEEEEE
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG-VHYRITE---SNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.||.+ ..+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+.... .++.+.. .++|.|.+++.+|+|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 56777 46666888999999999999999999999999999987653 3444432 4589999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCCCCC
Q psy10160 204 NSYTSDENAVTIRVEGIFIHPS 225 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~~p~ 225 (558)
|..|.....+.|.|..++.+|.
T Consensus 97 n~~g~~~~~~~l~v~~~P~~p~ 118 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSSPS 118 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCCCE
T ss_pred ECCCceEEEEEEEECCCCCCCc
Confidence 9999999999999977665543
No 309
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.35 E-value=2.1e-12 Score=110.29 Aligned_cols=84 Identities=23% Similarity=0.377 Sum_probs=68.4
Q ss_pred eeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC---------CceEEEc------cCCeEEEccCC
Q psy10160 127 LVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND---------GVHYRIT------ESNRLHINQAN 191 (558)
Q Consensus 127 ~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~---------~~~~~~~------~~~sL~I~~v~ 191 (558)
..||.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+... ..++.+. .+++|.|.+++
T Consensus 19 ~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 98 (137)
T 3qr2_A 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLV 98 (137)
T ss_dssp --CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSCC
T ss_pred CCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCCC
Confidence 36899999999999999999999999999999999999987655321 1122222 34589999999
Q ss_pred CCCCeEEEEEEEeCCceee
Q psy10160 192 ATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~~~ 210 (558)
.+|+|.|+|.|.|..|...
T Consensus 99 ~~D~G~Y~C~a~N~~G~~~ 117 (137)
T 3qr2_A 99 EEDTGTYECRASNDPDRNH 117 (137)
T ss_dssp GGGCEEEEEEEECCTTSSS
T ss_pred cccCEEEEEEEEecCCccc
Confidence 9999999999999999873
No 310
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.35 E-value=4.4e-13 Score=122.24 Aligned_cols=168 Identities=11% Similarity=0.027 Sum_probs=103.1
Q ss_pred CcEEEecCCceEeeCCCcEEEEeE-eeccCC-CeEEEEECCEEec--cCCceEEEccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCD-VDGYPI-PQVFWYKDGQVIE--NDGVHYRITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~-~~g~P~-p~i~W~~~g~~l~--~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
|+.....+....+.+|+.+.|.|. +.+.|. |.+.|+|++..+. ....++....+++|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 444445567788999999999999 999999 9999999998774 233344555677899999999999999999999
Q ss_pred CCceeeE---EEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhh
Q psy10160 205 SYTSDEN---AVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAA 281 (558)
Q Consensus 205 ~~G~~~~---~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~ 281 (558)
..+.... .+.+.+...... ....| ..........+..|..... .|.+.|.|+|.+.|++++........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~--~~~~p---~~~~~~~~~~~~~g~~~~l---~C~~~g~p~p~v~W~~~~~~~~~~~~ 159 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERTT--KPYPA---DIVVQFKDVYALMGQNVTL---ECFALGNPVPDIRWRKVLEPMPSTAE 159 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSSC--CCEEE---EEEEECCCEEEETTCCEEE---EEEEEEESCCEEEEEETTBCCCTTCE
T ss_pred cCCCcchhhcccceeecccccc--CCCCC---ceEecCCceEEecCCcEEE---EEEccCCCCCceEEEeCCCcCCCcee
Confidence 8766543 334444321100 00000 0000111122233334444 45556899999999998764432211
Q ss_pred hhhhcccccchhhhhhhHHHhhc
Q psy10160 282 DKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 282 ~~~~~grth~q~a~~~t~g~~~~ 304 (558)
.....+..++..+.....|.|..
T Consensus 160 ~~~~~~~L~i~~v~~~d~G~Y~C 182 (201)
T 3s97_C 160 ISTSGAVLKIFNIQLEDEGIYEC 182 (201)
T ss_dssp EETTTTEEEECSCCGGGCEEEEE
T ss_pred ecCCCCEEEEccCChhhCEEEEE
Confidence 11122344455555555554443
No 311
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.35 E-value=7.9e-13 Score=130.68 Aligned_cols=144 Identities=10% Similarity=0.096 Sum_probs=88.7
Q ss_pred ceeEEeccCCC-C-CCcEEEEeCCcccCCCCce----e-ecccc---ce---------eeceeEEeeccceeeEEeeec-
Q psy10160 65 TILSSAFPSES-A-SPVVTQTTTTTTEATSPHV----Y-AALTH---CV---------PWSNVCLFGARSGYLKETQNG- 124 (558)
Q Consensus 65 ~~~~~~~~~~~-p-~p~v~W~~~~~~~~~~~~~----~-~g~~~---~~---------~~~~~~~~~~~~~~~~~~~~~- 124 (558)
.+.+.|.+.+. | .+.|+|++++..+...... . .+.+. .+ .-.|.|.+.+..+........
T Consensus 26 ~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~ 105 (323)
T 2wqr_A 26 TIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKC 105 (323)
T ss_dssp EEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCC
T ss_pred cEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecC
Confidence 67789988875 4 4789999998776543211 0 11110 00 123566666655433322111
Q ss_pred ---eeeeCcEEEecCCceEeeCCCcEEEEeEeecc-CCC---eEEEEECC-EEeccCCceEEE-c------cCCeEEEcc
Q psy10160 125 ---GYLVPVKVNITLETQVFGVGSDISIPCDVDGY-PIP---QVFWYKDG-QVIENDGVHYRI-T------ESNRLHINQ 189 (558)
Q Consensus 125 ---~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p---~i~W~~~g-~~l~~~~~~~~~-~------~~~sL~I~~ 189 (558)
....|+.+...+....+.+|+.+.|.|.+.|. |.| .|.|+|++ ..+.... .... . ..++|.|.+
T Consensus 106 ~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~-~~~~~~~~g~~~~~~~L~I~~ 184 (323)
T 2wqr_A 106 ADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHST-RKEEKQRNGTLTVTSTLPVGT 184 (323)
T ss_dssp CCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCC-CEEEECTTSCEEEEEEEECCH
T ss_pred CCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccccc-CCCccCCCCCEEEEEEEEECH
Confidence 11123333445555567899999999999986 567 89999975 4332211 1110 1 234799999
Q ss_pred CCCCCCeEEEEEEEeCCcee
Q psy10160 190 ANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~ 209 (558)
++.+|+|.|+|.|.|..+..
T Consensus 185 ~~~~D~G~Y~C~a~n~~~~~ 204 (323)
T 2wqr_A 185 RDWIEGETYQCRVTHPHLPR 204 (323)
T ss_dssp HHHHTTCCEEEEEECTTSSS
T ss_pred HHccCCCCEEEEEECCCCCC
Confidence 99999999999999987544
No 312
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.35 E-value=1.4e-13 Score=129.11 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=44.3
Q ss_pred eeCCCcEEEEeEeeccC-CC-eEEEEECCEEeccC-CceEEE--ccC------CeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 141 FGVGSDISIPCDVDGYP-IP-QVFWYKDGQVIEND-GVHYRI--TES------NRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P-~p-~i~W~~~g~~l~~~-~~~~~~--~~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+.+|+.++|.|.+.|.| .| .+.|+|+|..+... ...... ..+ ..|.|..+..+|+|.|+|.|.|....
T Consensus 146 ~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 224 (233)
T 3bqu_C 146 QLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 224 (233)
T ss_dssp HHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC---
T ss_pred hhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCCC
Confidence 34799999999999964 43 69999999877543 101101 111 25889999999999999999997543
No 313
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.35 E-value=1.2e-12 Score=127.17 Aligned_cols=219 Identities=14% Similarity=0.095 Sum_probs=126.9
Q ss_pred cccC-ceeEEeccCCCCCCcEEEEeCCcccCC---C-----------CceeeccccceeeceeEEeeccceeeEEeeece
Q psy10160 61 IDYG-TILSSAFPSESASPVVTQTTTTTTEAT---S-----------PHVYAALTHCVPWSNVCLFGARSGYLKETQNGG 125 (558)
Q Consensus 61 v~~~-~~~~~~~~~~~p~p~v~W~~~~~~~~~---~-----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (558)
+..| .+.+.|...+. +.|++++..... . .....|.|.|.+. +..+.......+.
T Consensus 16 v~~G~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~-------n~~~~~~~~~~l~ 84 (292)
T 4dkd_C 16 VKPGATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEP-------GDPLGGSAAIHLY 84 (292)
T ss_dssp ECTTCCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCC-------C----CCEEECCE
T ss_pred EcCCCcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEc-------cCCCCcceEEEEE
Confidence 4444 56688887764 899865432110 0 0112455555544 3333223333344
Q ss_pred eeeCcE-EEecCCceEeeCCCcEEEEeEeeccCC--CeEEEEEC-CEEeccCCceEEEccCCeEEEccCCCCCCeEEEEE
Q psy10160 126 YLVPVK-VNITLETQVFGVGSDISIPCDVDGYPI--PQVFWYKD-GQVIENDGVHYRITESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 126 ~~~p~~-~~~~~~~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~-g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
+..|+. +...+....+.+|+.+.|.|.+.+ |. |.+.|+++ +..+.. +.++....++.|.|.+++.+|+|.|+|.
T Consensus 85 V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 162 (292)
T 4dkd_C 85 VKDPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMR-HTNYSFSPWHGFTIHRAKFIQSQDYQCS 162 (292)
T ss_dssp ECCSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCS-SCCEECCSSSCCEETTCCGGGCSEEEEE
T ss_pred EcCccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCcccc-CCcccccCCceEEECCCCHHHCeEEEEE
Confidence 444443 455667788899999999999998 55 78999998 444443 4466666777899999999999999999
Q ss_pred EEeCCcee-eEEEEEEEeccCC-CCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC-Ccccccchhhhhhh
Q psy10160 202 ASNSYTSD-ENAVTIRVEGIFI-HPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP-SYGPHIKRAVEAEA 278 (558)
Q Consensus 202 a~N~~G~~-~~~~~l~V~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~-~~~~w~~~~l~~~~ 278 (558)
+.|..|.. +..+.|.|..... +|.+...+. . ..+..|....+ .|.+.+.++ +.+.|.+++.....
T Consensus 163 a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~---~------~~~~~g~~v~l---~C~~~~~~~~~~~~w~~~~~~~~~ 230 (292)
T 4dkd_C 163 ALMGGRKVMSISIRLKVQKVIPGPPALTLVPA---E------LVRIRGEAAQI---VCSASSVDVNFDVFLQHNNTKLAI 230 (292)
T ss_dssp ECSTTSCEECCCEEEEEECCCCSSCEEEEESS---C------BCCCSSSCEEE---EEEEEESSSCCEEECCBSSCCCCC
T ss_pred EEeCCCceeEEEEEEEEeCCCCCCCeEEccCC---c------eeEecCCCEEE---EEEecCCCCceEEEEeCCCccccc
Confidence 99988866 3578888875332 333221111 0 11123333444 444445554 55788887654322
Q ss_pred hhh-h-----hhhcccccchhhhhhhHHHhhc
Q psy10160 279 AAA-D-----KKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 279 ~~~-~-----~~~~grth~q~a~~~t~g~~~~ 304 (558)
... . ....+..++..+.....|.|..
T Consensus 231 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 262 (292)
T 4dkd_C 231 PQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSC 262 (292)
T ss_dssp CBEEEEETTEEEEEEEEEESSCCTTSCEEEEE
T ss_pred CccceeccceeeeEEEEEECccChhcCeEEEE
Confidence 211 1 1111234555555565665554
No 314
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=102.11 Aligned_cols=84 Identities=17% Similarity=0.287 Sum_probs=69.0
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
++.+...+....+.+|+.+.|.|.+ +.|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASN-KYGLATEGTRHTLTVREVGPADQGSYAVIA--- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSST-TCEEEEETTEEEEEESSCCTTCCSEEEEEE---
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCC-cEEEEEcCCEEEEEEcCCCcccCEEEEEEE---
Confidence 3556666788889999999999999 88999999999999887654 55544433 6999999999999999999
Q ss_pred CceeeEEEEEEEe
Q psy10160 206 YTSDENAVTIRVE 218 (558)
Q Consensus 206 ~G~~~~~~~l~V~ 218 (558)
|.....+.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 666777888774
No 315
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.35 E-value=2e-12 Score=105.82 Aligned_cols=90 Identities=23% Similarity=0.416 Sum_probs=72.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccC--CCeEEEEECCEEeccCCc----eEEEc------cCCeEEEccCCCCCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDGQVIENDGV----HYRIT------ESNRLHINQANATDS 195 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g~~l~~~~~----~~~~~------~~~sL~I~~v~~~D~ 195 (558)
.+|.+...+....+.+|+.++|.|.+.|.| .|.+.|+|++..+..... ++... .+++|.|.+++.+|+
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 88 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSE 88 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGGC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccccC
Confidence 578888888888999999999999999654 578999999998865421 11111 135899999999999
Q ss_pred eEEEEEEEeCCce-eeEEEEEEE
Q psy10160 196 GEYRCVASNSYTS-DENAVTIRV 217 (558)
Q Consensus 196 G~Y~C~a~N~~G~-~~~~~~l~V 217 (558)
|.|+|.|.|..|. .+..+.|.|
T Consensus 89 G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 89 GXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp EEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999998 457777776
No 316
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.35 E-value=9.7e-12 Score=101.24 Aligned_cols=89 Identities=19% Similarity=0.311 Sum_probs=74.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCC--c-------eEEEccCC---eEEEccCCCCCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDG--V-------HYRITESN---RLHINQANATDS 195 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~--~-------~~~~~~~~---sL~I~~v~~~D~ 195 (558)
.++.+...+.+..+.+|+.+.|.|.+.+ .|.+.|+|||.++..+. . ++.+..++ +|.|.+++.+|+
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 4577888899999999999999999998 77899999999998754 2 78877665 799999999999
Q ss_pred eEEEEEEEeCCceeeEEEEEEEeccC
Q psy10160 196 GEYRCVASNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 196 G~Y~C~a~N~~G~~~~~~~l~V~~~~ 221 (558)
|.|+|...+ ....++.|.|.++|
T Consensus 85 G~Y~~~~~~---~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 85 GALVGFSCP---GVQDSAALTIQESS 107 (112)
T ss_dssp SEEEEEEET---TEEEEEEEEEECSS
T ss_pred ccEEEEEEC---CeeEEEEEEEeCCC
Confidence 999875443 34568899998765
No 317
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.35 E-value=3.5e-12 Score=106.50 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=66.5
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECCEEecc-----C-CceEEE----ccCCeEEEccCCCCCCeEEEEEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDGQVIEN-----D-GVHYRI----TESNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g~~l~~-----~-~~~~~~----~~~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
+....+.+|+.+.|.|.+.|.| .+.+.|++++..+.. . ...+.. ...++|.|.+++.+|+|.|+|.|.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 3445788999999999999954 567999998874321 1 111111 123579999999999999999999
Q ss_pred eCCceeeEEEEEEEeccC
Q psy10160 204 NSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~ 221 (558)
|..|.....+.|.|.+++
T Consensus 95 n~~g~~~~~~~l~V~~~p 112 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHEKP 112 (122)
T ss_dssp CSSCEEEEEEEEEEEEEE
T ss_pred cCCCceEEEEEEEEeccC
Confidence 999999999999997654
No 318
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.35 E-value=1.9e-12 Score=123.17 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=56.0
Q ss_pred eEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEecc-------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 139 QVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEN-------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~-------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
..+..|+.+.|.|.+.| .|.| .+.|++++..+.. .+..|... ++|.|.++..+| |.|+|.|.|..+..
T Consensus 134 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~--s~L~i~~~~~~d-g~ytC~v~~~~~~~ 210 (253)
T 3liz_H 134 SAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS--SSVTVPSSTWPS-ETVTCNVAHPASST 210 (253)
T ss_dssp -----CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEE--EEEEEETTSTTT-SCCEEEEEEGGGTE
T ss_pred cccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEE--EEEEEcHHHCCC-ceEEEEEEECCCCc
Confidence 34557999999999998 7777 8999998863210 01233322 579999999999 99999999999887
Q ss_pred eEEEEEEEe
Q psy10160 210 ENAVTIRVE 218 (558)
Q Consensus 210 ~~~~~l~V~ 218 (558)
.....+.+.
T Consensus 211 ~~~~~~~~~ 219 (253)
T 3liz_H 211 KVDKKIVPR 219 (253)
T ss_dssp EEEEECCCC
T ss_pred ceEEEecCc
Confidence 777776665
No 319
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.35 E-value=3.4e-13 Score=123.17 Aligned_cols=162 Identities=12% Similarity=0.111 Sum_probs=102.3
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc-eEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV-HYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+|.+...+.. .+.+|+.++|.|.+.+.|. .+.|+|++..+..... ......+++|.|.+++.+|+|.|+|.+.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDT 81 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCC
Confidence 35666666664 7899999999999999876 6999999987642110 1112345689999999999999999999988
Q ss_pred -c--eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhh-
Q psy10160 207 -T--SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAAD- 282 (558)
Q Consensus 207 -G--~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~- 282 (558)
| ..+..+.|.|.+.+..|.+...+ . ..+..|. .....|.+.+. ++.+.|++++.........
T Consensus 82 ~g~~~~s~~~~l~V~~~~~~p~i~~~~---~-------~~v~~G~---~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~ 147 (198)
T 1ugn_A 82 AGRSESSDPLELVVTGAYIKPTLSAQP---S-------PVVNSGG---NVTLQCDSQVA-FDGFILCKEGEDEHPQCLNS 147 (198)
T ss_dssp TEECCCCCCEEEEEECSSCCCEEEEES---C-------SEEETTC---CEEEEEECSSC-CSEEEEEEC------CEEEC
T ss_pred CCcccCCccEEEEEcccccCCccccCC---c-------cccCCCC---cEEEEEecCCC-CcEEEEEECCCccCCccccc
Confidence 6 33567888887643333322111 1 1223333 33455666677 7899999998765322211
Q ss_pred -hh----hcccccchhhhhhhHHHhhcc
Q psy10160 283 -KK----RRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 283 -~~----~~grth~q~a~~~t~g~~~~~ 305 (558)
.. ..+..++..+.+...|.|...
T Consensus 148 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 175 (198)
T 1ugn_A 148 QPHARGSSRAIFSVGPVSPSRRWWYRCY 175 (198)
T ss_dssp ------CCEEEEEECCCCTTSCEEEEEE
T ss_pred cccCCCcceeEEEecccCcccCeEEEEE
Confidence 11 125566677777777766653
No 320
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.35 E-value=1.8e-12 Score=118.21 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=84.3
Q ss_pred eEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
..+..|++++|.|.+ |.|.| .|.|++.+..+ ++......++.|.|.+++.+|.|.|.|.|.|..|.....+.|.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~lt 92 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLL 92 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEE
Confidence 578999999999999 99988 99999966444 2222233456899999999999999999999999988999999
Q ss_pred EeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CC----Ccccccchhhhhh
Q psy10160 217 VEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LP----SYGPHIKRAVEAE 277 (558)
Q Consensus 217 V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~----~~~~w~~~~l~~~ 277 (558)
|..+| .++.+. ......|... .+|.+.+. |. +.+.|++++..+.
T Consensus 93 V~~~P---~~~~i~----------~~~~~~g~~~----l~C~a~g~~P~~~~~lti~Wlk~~~~L~ 141 (210)
T 1gsm_A 93 VYAFP---NQLTVS----------PAALVPGDPE----VACTAHKVTPVDPNALSFSLLVGGQELE 141 (210)
T ss_dssp EEBCC---SEEEEE----------SSSBCTTCCE----EEEEEEEEBCCCTTTEEEEEEETTEECT
T ss_pred EEecC---CCcEEc----------cceEEeCCce----EEEEeCCCCCCCCCCcEEEEEECCEEcc
Confidence 97654 222111 0011112222 55656564 53 4799999987764
No 321
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.35 E-value=2.3e-12 Score=121.98 Aligned_cols=134 Identities=13% Similarity=0.164 Sum_probs=92.2
Q ss_pred EEecCCceEeeCCCcEEEEeEeec---cCCCeEEEEECCEEe-----------------------------ccCCceEEE
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDG---YPIPQVFWYKDGQVI-----------------------------ENDGVHYRI 179 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g---~P~p~i~W~~~g~~l-----------------------------~~~~~~~~~ 179 (558)
+..++....+.+|+.+.|.|.+.+ .|.|.+.|+|++... .....++.+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 344556778899999999999998 889999999987442 111123333
Q ss_pred cc--CCeEEEccCCCCCCeEEEEEEEeCCcee-----eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeE
Q psy10160 180 TE--SNRLHINQANATDSGEYRCVASNSYTSD-----ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQF 252 (558)
Q Consensus 180 ~~--~~sL~I~~v~~~D~G~Y~C~a~N~~G~~-----~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 252 (558)
.. +.+|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|..++.+|.... . ....+.+ . .+..
T Consensus 85 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~-~--~~~~~~v-----~---~g~~ 153 (250)
T 2fbo_J 85 ANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHV-S--TAEVVQV-----D---EGND 153 (250)
T ss_dssp SCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEE-C--CCSEEEC-----C---TTCC
T ss_pred ccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEE-e--cCceEEe-----c---CCCc
Confidence 32 3589999999999999999999987754 5688888876533332221 0 1111111 1 1444
Q ss_pred EEEeccCCCCCCCcccccchhhhh
Q psy10160 253 CCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 253 ~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
....|.+.+.|+|.+.|++++...
T Consensus 154 v~L~C~~~g~p~p~v~W~k~~~~~ 177 (250)
T 2fbo_J 154 ITMTCPCTDCANANVTWYTGPTFF 177 (250)
T ss_dssp EEECCCEESCTTCEEEEEEEEECS
T ss_pred EEEEEEecCCCCCeeEEEeCCCcc
Confidence 557788889899999999997544
No 322
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.34 E-value=3.1e-12 Score=124.45 Aligned_cols=89 Identities=13% Similarity=0.217 Sum_probs=61.4
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCC------eEEEEECC--EE---ec-c-------CCceEEEcc---CCeEEEc
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIP------QVFWYKDG--QV---IE-N-------DGVHYRITE---SNRLHIN 188 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p------~i~W~~~g--~~---l~-~-------~~~~~~~~~---~~sL~I~ 188 (558)
.+...+....+.+|+.++|.|.+.+.|.| .+.|+|+. .. +. . ...++.... ..+|.|.
T Consensus 161 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 240 (291)
T 2gki_A 161 VMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTIS 240 (291)
T ss_dssp CEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEEC
Confidence 34444556778999999999999998876 89999962 21 11 0 023454332 2379999
Q ss_pred cCCCCCCeEEEEEEEeCCceee-EEEEEEEec
Q psy10160 189 QANATDSGEYRCVASNSYTSDE-NAVTIRVEG 219 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~ 219 (558)
+++.+|+|.|+|.+.|.....- .-..|.|++
T Consensus 241 ~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~ 272 (291)
T 2gki_A 241 SVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKH 272 (291)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CCCHHHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 9999999999999999654332 234556653
No 323
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.34 E-value=1.2e-12 Score=105.84 Aligned_cols=88 Identities=20% Similarity=0.440 Sum_probs=73.9
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.|.|.| +.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGD-KYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSS-SEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCC-cEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 46777777888899999999999999999999 99999998886544 66666655 499999999999999998
Q ss_pred CCceeeEEEEEEEeccC
Q psy10160 205 SYTSDENAVTIRVEGIF 221 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~ 221 (558)
.|.....+.|.|.+++
T Consensus 82 -~g~~~~~~~l~V~~~p 97 (103)
T 2e7b_A 82 -FGDQTTSATLTVTALP 97 (103)
T ss_dssp -CSSCBCCBCEEEECCC
T ss_pred -ECCcEEEEEEEEEecc
Confidence 6667777888887554
No 324
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=108.31 Aligned_cols=87 Identities=14% Similarity=0.273 Sum_probs=69.2
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEec-------cCCceEEEcc----CCeEEEccCCCCCCeEEEEEEE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIE-------NDGVHYRITE----SNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~-------~~~~~~~~~~----~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
.+....+.+|+.++|.|.+.+.|.|.+.|++.+..+. ..+.++.+.. .++|.|.+++.+|+|.|+|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 4456778999999999999999999999998665322 1233554432 3589999999999999999999
Q ss_pred eCCceeeEEEEEEEeccCC
Q psy10160 204 NSYTSDENAVTIRVEGIFI 222 (558)
Q Consensus 204 N~~G~~~~~~~l~V~~~~~ 222 (558)
|. |.....+.|.|..+|.
T Consensus 87 n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp SS-SEEEEEEEEEEECC--
T ss_pred cC-CCCcEEEEEEEEeCCC
Confidence 99 9999999999976653
No 325
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.34 E-value=2.2e-11 Score=134.19 Aligned_cols=198 Identities=11% Similarity=0.057 Sum_probs=125.0
Q ss_pred CEEEEEEEEeCCcceEEEEEEEEeCCCCccCCCC---------ccccCceeEEeccCCCCCCcEEEEeCCcccCCCCcee
Q psy10160 26 LGAYTCQAYNGLGRAVSWTVTLQALPSEKVADPN---------AIDYGTILSSAFPSESASPVVTQTTTTTTEATSPHVY 96 (558)
Q Consensus 26 ~G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~---------~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~~~~~~~ 96 (558)
+|.|.+.-.+......++.|..-..+........ ....|...+.|.+.+.|.|.+.|.+++..........
T Consensus 45 ~g~y~~~~~s~~~~~~~a~l~sp~~~~~~~~c~~F~y~m~G~~~~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~ 124 (731)
T 2v5y_A 45 SGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAE 124 (731)
T ss_dssp SSEEEEEECTTCCTTCEEEEEEEEECCSSCCEEEEEEEEECSSSSCSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEE
T ss_pred cccEEEEECcCCCCCCEEEEEeCccCCCCCcEEEEEEEecCCCCCCcceEEEEEecCCCCccceeEEEeCCcCCceeEEE
Confidence 4999887665432223444443222211100000 0123567789999999999999999987654322111
Q ss_pred e--cc--ccceeeceeEEeeccceeeEEeeec----eeeeCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEE-EE--E
Q psy10160 97 A--AL--THCVPWSNVCLFGARSGYLKETQNG----GYLVPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVF-WY--K 165 (558)
Q Consensus 97 ~--g~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~-W~--~ 165 (558)
. .. .........|.+.+..+........ ....||.+. .+.+..+.+|+.+.|.|.+.|.|.|.+. |+ +
T Consensus 125 ~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~ 203 (731)
T 2v5y_A 125 LAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGI 203 (731)
T ss_dssp EEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEES
T ss_pred EEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecC
Confidence 0 00 1111233445555555544433221 122466665 5667889999999999999999999987 88 6
Q ss_pred CCEEeccCCceEEEcc---CCeEEEccCCCCCCeEEEEEEEeCCce-eeEEEEEEEeccCCCCC
Q psy10160 166 DGQVIENDGVHYRITE---SNRLHINQANATDSGEYRCVASNSYTS-DENAVTIRVEGIFIHPS 225 (558)
Q Consensus 166 ~g~~l~~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N~~G~-~~~~~~l~V~~~~~~p~ 225 (558)
+|..+.... ...+.. .++|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..++.+|.
T Consensus 204 ~g~~l~~~~-~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~ 266 (731)
T 2v5y_A 204 DVRDAPLKE-IKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIA 266 (731)
T ss_dssp SSCCEEEEE-EEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSS
T ss_pred CCccccccc-eEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCC
Confidence 777665421 112222 258999999999999999999999998 67778888887665443
No 326
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.33 E-value=5.4e-12 Score=120.84 Aligned_cols=68 Identities=25% Similarity=0.511 Sum_probs=50.7
Q ss_pred ceEeeCCCcEEEEeEeeccCC--CeEEEEECC--EE---ec---cC----------CceEEEcc-----CCeEEEccCCC
Q psy10160 138 TQVFGVGSDISIPCDVDGYPI--PQVFWYKDG--QV---IE---ND----------GVHYRITE-----SNRLHINQANA 192 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~g--~~---l~---~~----------~~~~~~~~-----~~sL~I~~v~~ 192 (558)
...+.+|+.++|.|.+.+.|. |.+.|+|+. .. +. .. ..++.+.. ..+|.|.+++.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 226 (264)
T 2gjj_A 147 PEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS 226 (264)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc
Confidence 346889999999999999874 789999863 21 11 00 12443321 24799999999
Q ss_pred CCCeEEEEEEEeC
Q psy10160 193 TDSGEYRCVASNS 205 (558)
Q Consensus 193 ~D~G~Y~C~a~N~ 205 (558)
+|+|.|.|.+.|.
T Consensus 227 ~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 227 EDSADYYCVRSGN 239 (264)
T ss_dssp GGCEEEEEEEECS
T ss_pred ccCEEEEEEEecC
Confidence 9999999999995
No 327
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.33 E-value=3.3e-11 Score=126.96 Aligned_cols=153 Identities=14% Similarity=0.207 Sum_probs=88.1
Q ss_pred cCceeEEeccCCCCCC--cEEEEeCCcccCCCC---cee---eccccc---e---------eeceeEEeeccceeeE---
Q psy10160 63 YGTILSSAFPSESASP--VVTQTTTTTTEATSP---HVY---AALTHC---V---------PWSNVCLFGARSGYLK--- 119 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~p--~v~W~~~~~~~~~~~---~~~---~g~~~~---~---------~~~~~~~~~~~~~~~~--- 119 (558)
+..+.+.|.+.+.+++ .|+|++++..+.... ... .|.|.. + .-.+.|.+.+......
T Consensus 312 g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~~~~ 391 (512)
T 1zvo_C 312 RDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQRLM 391 (512)
T ss_pred CCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCCcee
Confidence 3466789988886443 899999987654110 000 111110 1 1134666665543211
Q ss_pred Eeeecee--eeCcEEEecCCceEeeCCCcEE-EEeEeeccCCC--eEEEEECCEEeccCCc---eEEEccCC-------e
Q psy10160 120 ETQNGGY--LVPVKVNITLETQVFGVGSDIS-IPCDVDGYPIP--QVFWYKDGQVIENDGV---HYRITESN-------R 184 (558)
Q Consensus 120 ~~~~~~~--~~p~~~~~~~~~~~v~~G~~v~-L~C~~~g~P~p--~i~W~~~g~~l~~~~~---~~~~~~~~-------s 184 (558)
....... ..+|.+...+... .|+.+. |.|.+.|.++| .+.|+|+|..+..... ......++ .
T Consensus 392 ~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~ 468 (512)
T 1zvo_C 392 ALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSV 468 (512)
T ss_pred EEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEE
Confidence 1000001 2355554443332 789999 99999996554 5899999998865321 11122333 3
Q ss_pred EEEccCCCCCCeEEEEEEEeCCceee--EEEEEEEe
Q psy10160 185 LHINQANATDSGEYRCVASNSYTSDE--NAVTIRVE 218 (558)
Q Consensus 185 L~I~~v~~~D~G~Y~C~a~N~~G~~~--~~~~l~V~ 218 (558)
|.|.....+|.|.|+|.|.|...... ....+.|.
T Consensus 469 L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~ 504 (512)
T 1zvo_C 469 LRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVS 504 (512)
T ss_pred EEECchhcCCCCeEEEEEEecCCCCceEEEEEEEec
Confidence 66777777789999999999876543 44455553
No 328
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.33 E-value=9.5e-12 Score=115.60 Aligned_cols=67 Identities=21% Similarity=0.471 Sum_probs=51.9
Q ss_pred eCCCcEEEEeEeec-cCC-C-eEEEEECCEEecc---------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 142 GVGSDISIPCDVDG-YPI-P-QVFWYKDGQVIEN---------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 142 ~~G~~v~L~C~~~g-~P~-p-~i~W~~~g~~l~~---------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
.+|+.++|.|.+.| .|. | .+.|+++|..+.. .+..|.+. +.|.|.++..+|+|.|+|.|.|..+..
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~--s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTS--SQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEE--EEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEE--EEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 68999999999998 776 4 8999999876621 12233322 369999999999999999999987654
Q ss_pred e
Q psy10160 210 E 210 (558)
Q Consensus 210 ~ 210 (558)
.
T Consensus 214 ~ 214 (221)
T 3m8o_H 214 Q 214 (221)
T ss_dssp E
T ss_pred e
Confidence 3
No 329
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.33 E-value=1.9e-12 Score=125.12 Aligned_cols=88 Identities=16% Similarity=0.237 Sum_probs=58.5
Q ss_pred EEecCCceEeeCCCcEEEEeEeec-cC-CCeEEEEEC--CEEecc-----------CCceEEEccC---CeEEEccCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDG-YP-IPQVFWYKD--GQVIEN-----------DGVHYRITES---NRLHINQANAT 193 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g-~P-~p~i~W~~~--g~~l~~-----------~~~~~~~~~~---~sL~I~~v~~~ 193 (558)
+...+. ..+.+|++++|.|.+.+ .| .+.+.|+|. +..+.. ...++....+ .+|.|.+++.+
T Consensus 143 v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 221 (280)
T 3fku_X 143 LTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPE 221 (280)
T ss_dssp BBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGG
T ss_pred EEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHH
Confidence 333444 67889999999999998 44 478999983 222110 0124444332 25999999999
Q ss_pred CCeEEEEEEEeCCce---eeEEEEEEEecc
Q psy10160 194 DSGEYRCVASNSYTS---DENAVTIRVEGI 220 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~---~~~~~~l~V~~~ 220 (558)
|+|.|.|.+.|..+. ......|.|...
T Consensus 222 DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 222 DEADYYCSTWDSSLSAVVFGGGTKLTVLGQ 251 (280)
T ss_dssp GCSEEEEEEEETTTTEEEEBCCCEEEEC--
T ss_pred HCEEEEEEEecCCCCceEECCCEEEEECCC
Confidence 999999999998732 123456777543
No 330
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.32 E-value=5e-12 Score=121.34 Aligned_cols=69 Identities=19% Similarity=0.419 Sum_probs=51.8
Q ss_pred CceEeeCCCcEEEEeEeeccCC--CeEEEEEC--CEEec------------------cCCceEEEcc-----CCeEEEcc
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPI--PQVFWYKD--GQVIE------------------NDGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~--p~i~W~~~--g~~l~------------------~~~~~~~~~~-----~~sL~I~~ 189 (558)
....+.+|+.++|.|.+.|.|. |.+.|+|+ +..+. ....++.+.. ..+|.|.+
T Consensus 159 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 238 (268)
T 1x9q_A 159 GGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNN 238 (268)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred CceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECC
Confidence 4567889999999999998864 78999985 22210 1123555432 24799999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy10160 190 ANATDSGEYRCVASNS 205 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~ 205 (558)
++.+|+|.|+|.+.|.
T Consensus 239 v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 239 LRVEDTGIYYCTGASY 254 (268)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CCHHHCEEEEEEEccC
Confidence 9999999999999985
No 331
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=3.9e-12 Score=105.04 Aligned_cols=88 Identities=19% Similarity=0.251 Sum_probs=72.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-c---CCeEEEccCCCCCCeEEEEEEEe
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-E---SNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~---~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
|+.+...+.+..+.+|+.+.|.|.+.|.|.|.+.|+|++..+..+. ++.+. . ..+|.|.+++.+|+|.|+|.
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 88 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANE-LNEIDAQPGGYHVLTLRQLALKDSGTIYFE--- 88 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSS-SCCBCCBTTTBCCBEECSCCTTTCEEEEEE---
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCC-cEEEEEcCCCEEEEEEcCCChhhCEEEEEE---
Confidence 4577778888999999999999999999999999999999887654 44433 1 23799999999999999999
Q ss_pred CCceeeEEEEEEEeccC
Q psy10160 205 SYTSDENAVTIRVEGIF 221 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~~ 221 (558)
.|.....+.|.|.+++
T Consensus 89 -~g~~~~~~~L~V~~~p 104 (115)
T 2cr6_A 89 -AGDQRASAALRVTEKP 104 (115)
T ss_dssp -ETTEECCEEEEEECCS
T ss_pred -ECCeeEEEEEEEECCC
Confidence 4667777889997554
No 332
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.32 E-value=3.1e-12 Score=117.98 Aligned_cols=134 Identities=15% Similarity=0.175 Sum_probs=88.1
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E---Eecc--------CCceEEEccC---CeEEEccCCCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q---VIEN--------DGVHYRITES---NRLHINQANATDS 195 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~---~l~~--------~~~~~~~~~~---~sL~I~~v~~~D~ 195 (558)
+...+....+.+|+.+.|.|.+.+.|.|.+.|+|++ . .+.. ...++.+... .+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3nl4_L 4 MTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADA 83 (213)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred EEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHC
Confidence 445567788999999999999999999999999842 1 1110 1235544332 3799999999999
Q ss_pred eEEEEEEEeCCc---eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCCcccccc
Q psy10160 196 GEYRCVASNSYT---SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPSYGPHIK 271 (558)
Q Consensus 196 G~Y~C~a~N~~G---~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~~~~w~~ 271 (558)
|.|+|.+.|..+ .......|.|.....+|.+...+. . ..... +......|.+.| .|++.+.|++
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~-------~~~~~---g~~v~l~C~~~g~~P~~~v~W~k 151 (213)
T 3nl4_L 84 ATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPP--S-------ADLVA---TGTVTIVCVANKYFPDVTVTWEV 151 (213)
T ss_dssp EEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECC--C-------HHHHT---TSEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCC--c-------hhhcc---CCcEeEEEEEecccCCcEEEEEe
Confidence 999999999887 334556677755433333221110 0 00111 223345565656 7899999999
Q ss_pred hhhhhh
Q psy10160 272 RAVEAE 277 (558)
Q Consensus 272 ~~l~~~ 277 (558)
++....
T Consensus 152 ~g~~~~ 157 (213)
T 3nl4_L 152 DGTTQT 157 (213)
T ss_dssp TTEECC
T ss_pred CCccCC
Confidence 976543
No 333
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.32 E-value=1.8e-12 Score=118.96 Aligned_cols=156 Identities=9% Similarity=0.036 Sum_probs=99.5
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc------------------CCceEEEccCCeEEEccCCCCCC
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN------------------DGVHYRITESNRLHINQANATDS 195 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~------------------~~~~~~~~~~~sL~I~~v~~~D~ 195 (558)
+.+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..... ...++.+..+++|.|.+++.+|+
T Consensus 4 i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~ 83 (208)
T 3r4d_A 4 IEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDM 83 (208)
T ss_dssp EEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGC
T ss_pred ccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCC
Confidence 344456788999999999999999999999997532211 12355666678999999999999
Q ss_pred eEEEEEEEeCC-ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhh
Q psy10160 196 GEYRCVASNSY-TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAV 274 (558)
Q Consensus 196 G~Y~C~a~N~~-G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l 274 (558)
|.|+|.+.|.. +.....+.|.|..++..|.....+ ..+..|.... ..|.+.+.| |.+.|++++.
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-----------~~~~~g~~v~---l~C~~~~~p-p~i~W~~~g~ 148 (208)
T 3r4d_A 84 GVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTN-----------TTVKELDSVT---LTCLSNDIG-ANIQWLFNSQ 148 (208)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESC-----------SSCCTTCCEE---EEEECSCTT-CEEEEEETTE
T ss_pred eEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCC-----------ceEeeCCCEE---EEEECCCCC-CceEEEECCE
Confidence 99999999995 566788888887654333322111 0022222333 455565655 7999999875
Q ss_pred hhhhhhh-hhh-hcccccchhhhhhhHHHhhc
Q psy10160 275 EAEAAAA-DKK-RRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 275 ~~~~~~~-~~~-~~grth~q~a~~~t~g~~~~ 304 (558)
....... ... ..+...+..+.....|.|..
T Consensus 149 ~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 180 (208)
T 3r4d_A 149 SLQLTERMTLSQNNSILRIDPIKREDAGEYQC 180 (208)
T ss_dssp ECCCCSSEEEETTTTEEEESSCCGGGCEEEEE
T ss_pred eCCCCCCeEEcCCCCEEEEeccCHHhCeEEEE
Confidence 5432221 111 11334444455555554444
No 334
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.31 E-value=3e-12 Score=121.13 Aligned_cols=75 Identities=12% Similarity=0.258 Sum_probs=54.4
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEEEc--------cCC------eEEEccCCCCC-CeE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYRIT--------ESN------RLHINQANATD-SGE 197 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~--------~~~------sL~I~~v~~~D-~G~ 197 (558)
.+....+.+|+.++|.|.+.|.|+| .+.|+|+|..+.... ..... .++ .|.|.....+| .|.
T Consensus 131 ~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~ 209 (246)
T 4dzb_B 131 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV-CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNH 209 (246)
T ss_dssp CCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE-EECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCE
T ss_pred cCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCe
Confidence 3444456679999999999997765 799999999886532 11000 122 48888888888 999
Q ss_pred EEEEEEeCCceee
Q psy10160 198 YRCVASNSYTSDE 210 (558)
Q Consensus 198 Y~C~a~N~~G~~~ 210 (558)
|+|.|.|......
T Consensus 210 YtC~v~~~~~~~~ 222 (246)
T 4dzb_B 210 FRCQVQFYGLSEN 222 (246)
T ss_dssp EEEEEEECCBCTT
T ss_pred EEEEEEecCCCCc
Confidence 9999999765543
No 335
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.31 E-value=4.2e-12 Score=114.03 Aligned_cols=119 Identities=13% Similarity=0.167 Sum_probs=87.4
Q ss_pred ceEeeCCCcEEEEeEee--ccCCCeEEEEE--CCEEec---------cCCceEEEccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 138 TQVFGVGSDISIPCDVD--GYPIPQVFWYK--DGQVIE---------NDGVHYRITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~--g~P~p~i~W~~--~g~~l~---------~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.....+|+++.|.|... +.|.|.|.|+| ++..+. ..+.|+.+..+++|.|.+++.+|+|.|+|.+.|
T Consensus 8 ~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n 87 (182)
T 1hnf_A 8 ETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYD 87 (182)
T ss_dssp EEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEe
Confidence 45568999999999653 35678899999 887762 123477788899999999999999999999999
Q ss_pred CCceee--EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 205 SYTSDE--NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 205 ~~G~~~--~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
..|... ..+.|.|..+...|.+. ..+. . +..+|.+.+.|++.+.|++++...
T Consensus 88 ~~g~~~~~~~~~L~V~~~~~~P~i~-----------~~~~------~---v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 88 TKGKNVLEKIFDLKIQERVSKPKIS-----------WTCI------N---TTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp TTSCEEEEEEEEEEEECCCCCCEEE-----------EETT------T---TEEEEECSSCSSCEEEEEESSCEE
T ss_pred CCCceeEEEEEEEEEcCcCCCCEEE-----------EccC------c---EEEEeEccCCCCCEEEEEECCEEC
Confidence 988763 56788887543333221 1110 1 225666778889999999987554
No 336
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.31 E-value=5.5e-12 Score=120.38 Aligned_cols=77 Identities=22% Similarity=0.320 Sum_probs=55.7
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECC--EEec-----------cCCceEEEcc-----CCeEEEcc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDG--QVIE-----------NDGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g--~~l~-----------~~~~~~~~~~-----~~sL~I~~ 189 (558)
++.+...+....+.+|+.++|.|.+.+. |.|.+.|+|.+ ..+. ....++.+.. ..+|.|.+
T Consensus 136 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 215 (259)
T 3omz_A 136 AQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISA 215 (259)
T ss_dssp -CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESS
T ss_pred CeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECC
Confidence 3445556667888999999999999885 88899999843 1110 0012455442 23699999
Q ss_pred CCCCCCeEEEEEEEeC
Q psy10160 190 ANATDSGEYRCVASNS 205 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~ 205 (558)
++.+|+|.|.|.+.+.
T Consensus 216 v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 216 LQLEDSAKYFCALGES 231 (259)
T ss_dssp CCGGGCSEEEEEEESC
T ss_pred CChhHCEEEEEEEeCc
Confidence 9999999999999864
No 337
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.31 E-value=4.6e-12 Score=121.54 Aligned_cols=72 Identities=15% Similarity=0.343 Sum_probs=52.2
Q ss_pred CCceEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCC---------------ceEEEccCCeEEEccCCCCC-CeE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDG---------------VHYRITESNRLHINQANATD-SGE 197 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~---------------~~~~~~~~~sL~I~~v~~~D-~G~ 197 (558)
+....+.+|+.++|.|.+.|.|+| .+.|+|+|..+.... ..|.+ ...|.|.....+| .|.
T Consensus 153 ~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~--~s~l~i~~~~~~d~~g~ 230 (268)
T 3pl6_D 153 PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSL--SSRLRVSATFWQNPRNH 230 (268)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEE--EEEEEEEHHHHSCTTCE
T ss_pred CCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEE--EEEEEEcHHHhccCCCE
Confidence 344455679999999999996665 799999998885421 12221 1257787777777 999
Q ss_pred EEEEEEeCCcee
Q psy10160 198 YRCVASNSYTSD 209 (558)
Q Consensus 198 Y~C~a~N~~G~~ 209 (558)
|+|.|.|.....
T Consensus 231 YtC~v~~~~l~~ 242 (268)
T 3pl6_D 231 FRCQVQFYGLSE 242 (268)
T ss_dssp EEEEEEECCBCT
T ss_pred EEEEEEcCCCCC
Confidence 999999976544
No 338
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.30 E-value=1.9e-12 Score=117.21 Aligned_cols=161 Identities=12% Similarity=0.038 Sum_probs=100.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCce-EEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVH-YRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|+|+|..+...... .....+++|.|.+++.+|+|.|+|.+.|..|
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 5666666666 78999999999999864 4689999999876521101 1112345899999999999999999999765
Q ss_pred ee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhh
Q psy10160 208 SD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKR 285 (558)
Q Consensus 208 ~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~ 285 (558)
.. +..+.|.|.+....|.+...+ . ..+..|.... ..|.+.+ +++.+.|++++............
T Consensus 82 ~~~~s~~~~l~V~~~~~~p~i~~~p---~-------~~v~~G~~v~---L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~ 147 (188)
T 1oll_A 82 WSEPSNLLDLVVTEMYDTPTLSVHP---G-------PEVISGEKVT---FYCRLDT-ATSMFLLLKEGRSSHVQRGYGKV 147 (188)
T ss_dssp ECCCCCCEEEEEESCSCCCEEEEES---C-------SEEETTCEEE---EEEECSS-SCSEEEEEEESSSCEEEEEECSS
T ss_pred CCCCCCceEEEecccCCCCeEEECC---C-------CccccCCEEE---EEEEcCC-CCCEEEEEECCccccccccCCCc
Confidence 43 466788886544333322111 1 1122333344 4555534 56789999987543321111122
Q ss_pred cccccchhhhhhhHHHhhcc
Q psy10160 286 RSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 286 ~grth~q~a~~~t~g~~~~~ 305 (558)
.+..++..+++...|.|...
T Consensus 148 ~~~L~I~~v~~~d~G~Y~C~ 167 (188)
T 1oll_A 148 QAEFPLGPVTTAHRGTYRCF 167 (188)
T ss_dssp EEEEEEEECCGGGCEEEEEE
T ss_pred eeEEEECCCCcCCCcEEEEE
Confidence 34456666777777766653
No 339
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.30 E-value=4.5e-12 Score=113.14 Aligned_cols=147 Identities=14% Similarity=0.148 Sum_probs=97.7
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCe-EEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQ-VFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+|.+...+....+.+|+.+.|.|.+.+.|.|. +.|+|++..+.. .+++|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~~~n~~ 77 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS--------QASSYFIDAATVNDSGEYRCQTNLST 77 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES--------SCSEEEESSCCGGGCEEEEEECSSSC
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC--------CceEEEEeCCCcccCEEEEEEeeCCc
Confidence 466777788888899999999999999999887 889999987753 34689999999999999999999966
Q ss_pred ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC-Ccccccchhhhhhhhhhhhhh
Q psy10160 207 TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP-SYGPHIKRAVEAEAAAADKKR 285 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~-~~~~w~~~~l~~~~~~~~~~~ 285 (558)
+ +..+.|.|..++ ..... . ...+..|.... ..|.+.+.++ +.+.|++++...... ..
T Consensus 78 ~--s~~~~l~V~~~~---~~~~~----~------~~~~~~g~~~~---l~C~~~~~~~~~~~~W~k~g~~~~~~----~~ 135 (175)
T 1fnl_A 78 L--SDPVQLEVHIGW---LLLQA----P------RWVFKEEDPIH---LRCHSWKNTALHKVTYLQNGKDRKYF----HH 135 (175)
T ss_dssp C--CCCEEEEEECSS---EEEEC----S------CSEEETTCCEE---EEEEECTTCCCEEEEEEETTEEEEEE----EE
T ss_pred c--cccEEEEEeCCC---ceeeC----C------CceecCCCCEE---EEEEcCCCCCceEEEEEECCeEccCC----CC
Confidence 5 445666665221 11110 1 11122333344 4454556655 599999987554211 11
Q ss_pred cccccchhhhhhhHHHhhc
Q psy10160 286 RSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 286 ~grth~q~a~~~t~g~~~~ 304 (558)
.+...+..+.....|.|..
T Consensus 136 ~~~L~i~~v~~~d~G~Y~C 154 (175)
T 1fnl_A 136 NSDFHIPKATLKDSGSYFC 154 (175)
T ss_dssp CCCEEESSCCGGGCEEEEE
T ss_pred CCEEEEcccChhhCeEEEE
Confidence 2344455555565665554
No 340
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.30 E-value=1.3e-11 Score=101.37 Aligned_cols=87 Identities=20% Similarity=0.296 Sum_probs=67.6
Q ss_pred CcEEEecCCc---eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEE
Q psy10160 129 PVKVNITLET---QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 129 p~~~~~~~~~---~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a 202 (558)
||.+...+.. ..+.+|+.+.|.|.+. .|.|.+.|+|++..+..+. ++.+..+ .+|.|.+++.+|+|.|+|.|
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 87 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESP-ALLLQKEDTVRRLVLPAVQLEDSGEYLCEI 87 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBT-TBEEEECSSEEEEEESSCCTTTCEEEEEES
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCC-CEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence 4444444433 5678999999999995 8999999999999887654 4444443 47999999999999999999
Q ss_pred EeCCceeeEEEEEEEeccC
Q psy10160 203 SNSYTSDENAVTIRVEGIF 221 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~~~~ 221 (558)
.| .+..+.|.|..++
T Consensus 88 ~n----~~~~~~l~V~~~p 102 (113)
T 2cpc_A 88 DD----ESASFTVTVTEPP 102 (113)
T ss_dssp SS----CEEEEEEEEECCC
T ss_pred ec----CcEEEEEEEecCC
Confidence 99 5667888887544
No 341
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.30 E-value=5.1e-12 Score=114.87 Aligned_cols=128 Identities=13% Similarity=0.129 Sum_probs=87.7
Q ss_pred cCCceEeeCCCcEEEEeEeec-cCCCeEEEEECCEEec---cC----------C----ceEEEccCCeEEEccCCCCCCe
Q psy10160 135 TLETQVFGVGSDISIPCDVDG-YPIPQVFWYKDGQVIE---ND----------G----VHYRITESNRLHINQANATDSG 196 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g~~l~---~~----------~----~~~~~~~~~sL~I~~v~~~D~G 196 (558)
.+....+.+|+.++|.|.+.+ .|.+.|.|+|++..+. .. . .|+.+..+++|.|.+++.+|+|
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G 83 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTG 83 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGCE
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccCc
Confidence 345667889999999999976 5567999999986542 10 1 2455556789999999999999
Q ss_pred EEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCCcccccchhhh
Q psy10160 197 EYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPSYGPHIKRAVE 275 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~~~~w~~~~l~ 275 (558)
.|+|.+.|..|.....+.|.|..++..|.+... ......+ .......|.+.|. |+|.+.|++++..
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~-----------~~~~~~g--~~~v~L~C~~~g~~p~p~i~W~~~g~~ 150 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLRNIQVTNH-----------SQLFQNM--TCELHLTCSVEDADDNVSFRWEALGNT 150 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCEEEEEEEC-----------CC---CS--SEEEEEEEEEESCCTTCEEEEEETTEE
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCCCCeEecC-----------ceeecCC--CceEEEEEEEecCCCceEEEEEeCCEE
Confidence 999999999998777888998654322221110 0000111 1134456666674 5889999998643
No 342
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.29 E-value=1.6e-11 Score=131.56 Aligned_cols=124 Identities=20% Similarity=0.360 Sum_probs=85.7
Q ss_pred ceE-ecCCeEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEe
Q psy10160 8 NYE-LNKNMLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTT 84 (558)
Q Consensus 8 r~~-~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~ 84 (558)
|+. ..+++|.|.+++.+|+|.|+|.+.|..|... +..|.|...|..
T Consensus 425 r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~------------------------------- 473 (581)
T 3o3u_N 425 VARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGK------------------------------- 473 (581)
T ss_dssp TSEECTTSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCC-------------------------------
T ss_pred cEEEcCCceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCC-------------------------------
Confidence 444 4567999999999999999999999988763 345555443221
Q ss_pred CCcccCCCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCc-EEEEeEeec-cCCCeEE
Q psy10160 85 TTTTEATSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSD-ISIPCDVDG-YPIPQVF 162 (558)
Q Consensus 85 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~-v~L~C~~~g-~P~p~i~ 162 (558)
|.+. +....+.+|+. +.|.|.+.| +|.|.+.
T Consensus 474 ---------------------------------------------p~i~--~~~~~~~~~~~~~~l~C~~~~~~P~~~i~ 506 (581)
T 3o3u_N 474 ---------------------------------------------PEIV--DSASELTAGVPNKVGTCVSEGSYPAGTLS 506 (581)
T ss_dssp ---------------------------------------------CEEE--SCCSEECTTSCEEEEEEEEEEEBSCCEEE
T ss_pred ---------------------------------------------CEEE--cCCcccccCCceeEEEEECCCCCCCCeEE
Confidence 1111 11112344544 567999998 6999999
Q ss_pred EEECCEEeccCCceEEEc-------cC------CeEEEccCCCCC-CeEEEEEEEeCCcee
Q psy10160 163 WYKDGQVIENDGVHYRIT-------ES------NRLHINQANATD-SGEYRCVASNSYTSD 209 (558)
Q Consensus 163 W~~~g~~l~~~~~~~~~~-------~~------~sL~I~~v~~~D-~G~Y~C~a~N~~G~~ 209 (558)
|+++|..+...+.++.+. .. ++|.|.+++.+| .|.|+|.|+|..+..
T Consensus 507 W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 507 WHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp EEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred EEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 999999987644333221 11 369999998444 889999999997544
No 343
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.29 E-value=5.3e-12 Score=112.31 Aligned_cols=116 Identities=14% Similarity=0.097 Sum_probs=83.5
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc-----------CCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN-----------DGVHYRIT-ESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~-----------~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
...+.+|+.|+|.|.+.+ |.|.|.|+|++..+.. -..|+.+. .+++|.|.+++.+|+|.|+|.+.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 456789999999999854 8899999998864421 01244443 5689999999999999999999998
Q ss_pred CceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 206 YTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
.| ...+.|.|.+++..|.+. .... .. ...|.+.+.|+|.+.|++++...
T Consensus 83 ~~--~~~~~L~V~~~~~~p~i~-----------~~~~------~~---~L~C~~~~~p~p~i~W~~~~~~l 131 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMVSKPMIY-----------WECS------NA---TLTCEVLEGTDVELKLYQGKEHL 131 (171)
T ss_dssp CS--CEEEEEEEECCCCCCEEE-----------EETT------TT---EEEEECSSCSSCEEEEEETTEEE
T ss_pred CC--cEEEEEEEECcCCCCEEE-----------EecC------Cc---EEEEEeCCCCCcEEEEEECCEEC
Confidence 88 677888887654322221 1110 01 25677778899999999986443
No 344
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.28 E-value=1.1e-11 Score=117.10 Aligned_cols=72 Identities=17% Similarity=0.383 Sum_probs=52.1
Q ss_pred CCceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCC---------------ceEEEccCCeEEEccCCCCC-CeE
Q psy10160 136 LETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDG---------------VHYRITESNRLHINQANATD-SGE 197 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~---------------~~~~~~~~~sL~I~~v~~~D-~G~ 197 (558)
+....+.+|+.++|.|.+.|. |.| .+.|+++|..+.... ..|.+ ...|.|.....+| .|.
T Consensus 131 ~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d~~g~ 208 (245)
T 4ei6_B 131 PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYAL--SSRLRVSATFWQNPRNH 208 (245)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEE--EEEEEEEHHHHSCTTCE
T ss_pred CCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEE--EEEEEEcHHHhccCCCe
Confidence 344445679999999999994 545 799999999886531 11111 1248888888888 999
Q ss_pred EEEEEEeCCcee
Q psy10160 198 YRCVASNSYTSD 209 (558)
Q Consensus 198 Y~C~a~N~~G~~ 209 (558)
|+|.|.|.....
T Consensus 209 ytC~v~~~~l~~ 220 (245)
T 4ei6_B 209 FRCQVQFYGLSE 220 (245)
T ss_dssp EEEEEEECCBCT
T ss_pred EEEEEEECCCCC
Confidence 999999975443
No 345
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.28 E-value=2.8e-12 Score=122.19 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=35.6
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+.+|+.++|.|.+.|. |.| .|.|++++..+.. .+..|.. .+.|.|.++..+| |.|+|.|.|.....
T Consensus 145 ~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~--~s~L~I~~~~~~~-g~YtC~v~n~~~~~ 220 (257)
T 3bn9_D 145 STSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSNT 220 (257)
T ss_dssp --------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEE--EEECCCC--------CEEEEEEEGGGTE
T ss_pred ccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEE--EEEEEEcccccCC-CeEEEEEEecCCCc
Confidence 5679999999999986 888 8999999876421 1112221 1357888888778 99999999965443
No 346
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.28 E-value=5.3e-12 Score=113.99 Aligned_cols=149 Identities=15% Similarity=0.092 Sum_probs=91.4
Q ss_pred EeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEcc-CCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 140 VFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQ-ANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~-v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
+..+|+.+.|.|.+.| |. .|.|+|+|..+... .+++|.|.+ ++.+|+|.|+|.|.|..|.....+.+.|.
T Consensus 10 v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~-------~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~ 80 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DE-NLKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVG 80 (186)
T ss_dssp EEEETTEEEEECSSCC-CT-TCEEEETTEEECSC-------CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCC
T ss_pred EEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCC-------CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 3467999999999988 54 49999999988653 345899999 99999999999999999997777766664
Q ss_pred ccCCCCCCCC---------CCccccceeEEec--eeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcc
Q psy10160 219 GIFIHPSCRD---------LPLFANCKLIVEG--RYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRS 287 (558)
Q Consensus 219 ~~~~~p~~~~---------~~~~~~~~~~~~~--~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~g 287 (558)
....++.... .+...... .... ..+.....+......|.+ |+|.+.|++++........ ..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~---~~~ 153 (186)
T 1jbj_A 81 SADDAKKDAAKKDDAKKDDAKKDGSQT-NKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA---TKN 153 (186)
T ss_dssp SCCCCCCCCCCCCCCSCCSSSTTCCSC-CCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC---CSS
T ss_pred cccccccccccccccccCCcccccccc-ccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC---Ccc
Confidence 3322211000 00000000 0000 000111135555677765 8899999999866432111 223
Q ss_pred cccchhhhhhhHHHhhc
Q psy10160 288 RRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 288 rth~q~a~~~t~g~~~~ 304 (558)
...+..+.+...|.|..
T Consensus 154 ~L~i~~v~~~D~G~Y~C 170 (186)
T 1jbj_A 154 TWNLGNNAKDPRGTYQC 170 (186)
T ss_dssp CCEEEETTSCCEEEEEE
T ss_pred eEEECCCCcCcCEEEEE
Confidence 34445555555555543
No 347
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.27 E-value=4.8e-12 Score=115.61 Aligned_cols=124 Identities=18% Similarity=0.235 Sum_probs=84.0
Q ss_pred ceEeeCCCcEEEEeEee----ccCCCeEEEEECCEEecc--C---------CceEE--EccCCeEEEccCCCCCCeEEEE
Q psy10160 138 TQVFGVGSDISIPCDVD----GYPIPQVFWYKDGQVIEN--D---------GVHYR--ITESNRLHINQANATDSGEYRC 200 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~----g~P~p~i~W~~~g~~l~~--~---------~~~~~--~~~~~sL~I~~v~~~D~G~Y~C 200 (558)
...+.+|+.+.|.|.+. +.|.|.+.|++++..+.. . ..+.. ...+.+|.|.+++.+|+|.|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 45678999999999985 567889999999987621 0 01222 2345689999999999999999
Q ss_pred EEEeCCcee-----eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCC-CCCCCcccccchhh
Q psy10160 201 VASNSYTSD-----ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRA-GQLPSYGPHIKRAV 274 (558)
Q Consensus 201 ~a~N~~G~~-----~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~-g~~~~~~~w~~~~l 274 (558)
.+.|..|.. ...+.|.|..++..|... .... .. +......|.+. |.|+|.+.|++++.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~-----------~~~~--~~---g~~~~l~C~~~~g~P~p~i~W~k~g~ 146 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVKADFPTPSIS-----------DFEI--PT---SNIRRIICSTSGGFPEPHLSWLENGE 146 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEECCCCCCEEE-----------EEEC--SS---TTEEEEEEEEEEESSCEEEEEEESSC
T ss_pred EEEcCCCCccccccccEEEEEEcCCCCCCceE-----------eccC--CC---CCeEEEEEecCCccCCCEEEEEECCE
Confidence 999987654 356777776543222211 1000 11 22333556563 88999999999865
Q ss_pred hhh
Q psy10160 275 EAE 277 (558)
Q Consensus 275 ~~~ 277 (558)
...
T Consensus 147 ~l~ 149 (201)
T 1dr9_A 147 ELN 149 (201)
T ss_dssp EEC
T ss_pred ECc
Confidence 443
No 348
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=1e-12 Score=131.28 Aligned_cols=158 Identities=13% Similarity=0.070 Sum_probs=110.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCe-EEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSG-EYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G-~Y~C~a~N~~ 206 (558)
.+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+.....+.....+++|.|.+++.+|+| .|+|.|.|..
T Consensus 157 ~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~ 236 (347)
T 2ifg_A 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDV 236 (347)
T ss_dssp CCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETT
T ss_pred CCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCC
Confidence 477788888888899999999999999999999999999876543221222334568999999999999 9999999999
Q ss_pred ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhh-hh--
Q psy10160 207 TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAA-DK-- 283 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~-~~-- 283 (558)
|..+..+.|.|..++.. ... . ... +......|.+.|.|+|.+.|++++........ ..
T Consensus 237 g~~~~~~~l~V~~~P~i--~~~------------~--~~~---g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~ 297 (347)
T 2ifg_A 237 GRAEVSVQVNVSFPASV--QLH------------T--AVE---MHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEF 297 (347)
T ss_dssp EECCEEECCCCBEEEEE--EEC------------C--CEE---SSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE
T ss_pred CCEEEEEEEEEcCCCee--eec------------c--Ccc---CceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEE
Confidence 99988888888554321 000 0 011 23344666677999999999998765542221 10
Q ss_pred --------hhcccccchhhhhhhHHHhhc
Q psy10160 284 --------KRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 284 --------~~~grth~q~a~~~t~g~~~~ 304 (558)
...+..++..+.....|.|..
T Consensus 298 ~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C 326 (347)
T 2ifg_A 298 LEPAANETVRHGCLRLNQPTHVNNGNYTL 326 (347)
T ss_dssp CCCCTTCCCEEEEEEESSCCGGGCEEEEE
T ss_pred EeecCCCcccceEEEECCCCcccCceEEE
Confidence 112334555666666665544
No 349
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.27 E-value=2e-11 Score=111.91 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=98.6
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCe-EEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQ-VFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~-i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.|.+...+....+.+|+.+.|.|.+.+.|.|. +.|+|+|..+... .++|.|.+++.+|+|.|+|.+.|.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~--------~~~L~i~~v~~~D~G~Y~C~a~n~-- 76 (204)
T 3sgj_C 7 KAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ--------ASSYFIDAATVDDSGEYRCQTQLS-- 76 (204)
T ss_dssp BCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCC--------SSEEEESSCCGGGCEEEEEEETTS--
T ss_pred CCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccC--------ccEEEEecccccCCEEEEEEeCCC--
Confidence 45666777778899999999999999999887 9999999887643 268999999999999999999984
Q ss_pred eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcc
Q psy10160 208 SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRS 287 (558)
Q Consensus 208 ~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~g 287 (558)
..+..+.|.|..++ .....+ . ..+..|....+.|... .+.|.+.+.|++++....... ..+
T Consensus 77 ~~s~~~~l~V~~~p---~~~~~~---~-------~~v~~G~~v~L~C~~~--~~~p~~~v~W~k~g~~~~~~~----~~~ 137 (204)
T 3sgj_C 77 TLSDPVQLEVHIGW---LLLQAP---R-------WVFKEEDPIHLRCHSW--KNTALHKVTYLQNGKGRKYFH----HNS 137 (204)
T ss_dssp BCCCCEEEEEECSS---EEEECS---C-------SEEETTCCEEEEEEEG--GGCCCEEEEEEETTEEEEEEE----ECC
T ss_pred cccccEEEEEecCc---eEecCC---c-------eeEeCCCcEEEEEEec--CCCCCceEEEEECCcEeeccc----CCc
Confidence 44456677775432 111111 1 1122333444455432 234668899999875532111 123
Q ss_pred cccchhhhhhhHHHhhcc
Q psy10160 288 RRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 288 rth~q~a~~~t~g~~~~~ 305 (558)
...+..+.....|.|...
T Consensus 138 ~L~i~~v~~~D~G~Y~C~ 155 (204)
T 3sgj_C 138 DFYIPKATLKDSGSYFCR 155 (204)
T ss_dssp CEEESSCCGGGCEEEEEE
T ss_pred eEEECcCCcccCEEEEEE
Confidence 445555566666666553
No 350
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.27 E-value=8.4e-12 Score=115.50 Aligned_cols=70 Identities=17% Similarity=0.302 Sum_probs=46.5
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCCceEEEccCCeE----EEccCCCCCCeEEEEEEEeCCceeeEE
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDGVHYRITESNRL----HINQANATDSGEYRCVASNSYTSDENA 212 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~sL----~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 212 (558)
+.+|+.+.|.|.+.|. |.| .+.|++++..+......... .++.. .+.....+| |.|+|.|.|..|.....
T Consensus 134 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 134 DTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCCCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred hccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecCccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 4689999999999997 888 89999988654321101111 11211 122444466 99999999998876543
No 351
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.27 E-value=6.8e-12 Score=102.25 Aligned_cols=86 Identities=22% Similarity=0.555 Sum_probs=70.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.||.+...+....+.+|+.+.|.|.+.+. |.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 83 (108)
T 2dm7_A 7 GPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGG-RYSLKQDGTRCELQIHDLSVADAGEYSCMCGQ 83 (108)
T ss_dssp CCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSS-SCEEEEETTEEEEEESSCCTTTCSEEEEEETT
T ss_pred CCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCC-CEEEEecCCEEEEEECCCCcccCEEEEEEEcC
Confidence 57777777888899999999999999875 6899999998887543 56555555 499999999999999999944
Q ss_pred CCceeeEEEEEEEecc
Q psy10160 205 SYTSDENAVTIRVEGI 220 (558)
Q Consensus 205 ~~G~~~~~~~l~V~~~ 220 (558)
....+.|.|..+
T Consensus 84 ----~~~~~~l~V~~~ 95 (108)
T 2dm7_A 84 ----ERTSATLTVRAL 95 (108)
T ss_dssp ----EEEEEECEEECC
T ss_pred ----CEEEEEEEEecC
Confidence 567778888654
No 352
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.27 E-value=7.4e-12 Score=120.25 Aligned_cols=181 Identities=18% Similarity=0.222 Sum_probs=83.5
Q ss_pred CCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCcccc-CceeEEeccCCCCCCcEEEEeCCcccC--------
Q psy10160 21 VEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDY-GTILSSAFPSESASPVVTQTTTTTTEA-------- 90 (558)
Q Consensus 21 v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~-~~~~~~~~~~~~p~p~v~W~~~~~~~~-------- 90 (558)
.++.|.|.|.|.+.|..|... +..+.|...|.. ..+.. ..+.+.|...+ +.+.+.|++......
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v~~~p~~-----v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~ 76 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKVIQTPRY-----LVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQ 76 (270)
T ss_dssp -------------------------CCCEEECSE-----EEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeEEeCCCe-----EEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEEC
Confidence 467899999999999876542 333333332211 22334 46668887654 788999998321100
Q ss_pred --------------------CC----------CceeeccccceeeceeE---EeeccceeeEEeeeceeeeCcEEE-ecC
Q psy10160 91 --------------------TS----------PHVYAALTHCVPWSNVC---LFGARSGYLKETQNGGYLVPVKVN-ITL 136 (558)
Q Consensus 91 --------------------~~----------~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~-~~~ 136 (558)
.. .....|.|.|.+.+... ........+..........+|.+. ..+
T Consensus 77 ~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~ 156 (270)
T 3qib_D 77 NQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEP 156 (270)
T ss_dssp TTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEEC
T ss_pred CCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECC
Confidence 00 00013444444432100 000000111111111111244443 334
Q ss_pred CceEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCC---------------ceEEEccCCeEEEccCCCCC-CeEE
Q psy10160 137 ETQVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDG---------------VHYRITESNRLHINQANATD-SGEY 198 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~---------------~~~~~~~~~sL~I~~v~~~D-~G~Y 198 (558)
....+.+|+.++|.|.+.| .|.| .+.|+|+|..+.... ..|.+ ...|.|.....+| .|.|
T Consensus 157 ~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~~g~Y 234 (270)
T 3qib_D 157 SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYAL--SSRLRVSATFWQNPRNHF 234 (270)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEE--EEEEEEEHHHHHSTTCEE
T ss_pred CccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEE--EEEEEEcHHHhccCCCeE
Confidence 4444567999999999999 6767 799999999886521 11211 1257888887777 9999
Q ss_pred EEEEEeCCcee
Q psy10160 199 RCVASNSYTSD 209 (558)
Q Consensus 199 ~C~a~N~~G~~ 209 (558)
+|.|.|.....
T Consensus 235 tC~v~~~~l~~ 245 (270)
T 3qib_D 235 RCQVQFYGLSE 245 (270)
T ss_dssp EEEEEECCBCT
T ss_pred EEEEEecCCCC
Confidence 99999976544
No 353
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.27 E-value=5.2e-12 Score=117.92 Aligned_cols=132 Identities=13% Similarity=0.129 Sum_probs=90.8
Q ss_pred cCCceEeeCCCcEEEEeEeeccCC-CeEEEEECCEEec---------cC---CceEE----------EccCCeEEEccCC
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPI-PQVFWYKDGQVIE---------ND---GVHYR----------ITESNRLHINQAN 191 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~-p~i~W~~~g~~l~---------~~---~~~~~----------~~~~~sL~I~~v~ 191 (558)
.+....+.+|+.+.|.|.+.+.|. |.+.|++++.... .. ..++. +..+++|.|.+++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~ 85 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQ 85 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccC
Confidence 355677899999999999999995 8999998653311 00 12333 5566789999999
Q ss_pred CCCCeEEEEEEEeCC-ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccc
Q psy10160 192 ATDSGEYRCVASNSY-TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPH 269 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~-G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w 269 (558)
.+|+|.|+|.+.|.. |.....+.|.|..++..|.+...+... .+..|... ....|.+ .+.|+|.+.|
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~---------~~~~g~~~--~~l~C~~~~~~p~p~i~W 154 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTL---------SVMEDSAQ--EIATCNSRNGNPAPKITW 154 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSC---------CTTCCSEE--EEEEEEEEEEBSCCEEEE
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcce---------eecCCCce--EEEEEEeECcccCCEEEE
Confidence 999999999999997 888888999997665443322111100 00111111 1345555 5899999999
Q ss_pred cchhhhhh
Q psy10160 270 IKRAVEAE 277 (558)
Q Consensus 270 ~~~~l~~~ 277 (558)
++++....
T Consensus 155 ~~~~~~~~ 162 (231)
T 2pet_A 155 YRNGQRLE 162 (231)
T ss_dssp EETTEECC
T ss_pred EECCccCc
Confidence 99876543
No 354
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.27 E-value=7.8e-12 Score=119.42 Aligned_cols=68 Identities=19% Similarity=0.344 Sum_probs=49.2
Q ss_pred eeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccC--C-----ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 141 FGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIEND--G-----VHYRITESNRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~--~-----~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
+.+|+.++|.|.+.|. |.| .+.|++++..+... . ..|. ..+.|.|.++..+| |.|+|.|.|.......
T Consensus 141 v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~--~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~ 217 (261)
T 2xqy_G 141 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYT--LSSSVTVTSSTWPS-QSITCNVAHPASSTKV 217 (261)
T ss_dssp --CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEE--EEEEEEEETTTTTT-SCCEEEEEEGGGTEEE
T ss_pred ccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEE--EEEEEEEeccccCC-CEEEEEEEECCCCccE
Confidence 5679999999999985 777 89999998764311 1 1222 12469999998888 9999999997655433
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.26 E-value=1.3e-11 Score=123.82 Aligned_cols=106 Identities=12% Similarity=0.147 Sum_probs=71.6
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccC---CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEND---GVHYRITESNRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~---~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
.+....+.+|+.+.|.|.+.| |.|.+.|++++..+... ..++.+ .+++|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 252 ~~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~ 329 (361)
T 2xot_A 252 KESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-RNGDLFFKKVQVEDGGVYTCYAMGETFNETL 329 (361)
T ss_dssp CCCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-ETTEEEESSCCTTSCEEEEEEEECSSCEEEE
T ss_pred cccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-ecCeEEEeecCcccCEEEEEEEecCCCccEE
Confidence 345668899999999999999 99999999987654332 236666 7889999999999999999999999999999
Q ss_pred EEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCccc
Q psy10160 212 AVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGP 268 (558)
Q Consensus 212 ~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~ 268 (558)
.+.|.|...+ .. +......|.+.|.|+|.++
T Consensus 330 ~~~l~V~~~~-----------------~~---------g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 330 SVELKVYNFT-----------------LH---------GHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEESSC-----------------CC----------------------------
T ss_pred EEEEEEEeee-----------------cc---------CCceEEEEEeCCCCCCccc
Confidence 9999995421 00 2223356777899988764
No 356
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.26 E-value=9e-12 Score=117.34 Aligned_cols=74 Identities=14% Similarity=0.284 Sum_probs=53.1
Q ss_pred CCceEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCCceE---EEccCC------eEEEccCCCCC-CeEEEEEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDGVHY---RITESN------RLHINQANATD-SGEYRCVAS 203 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~~~~---~~~~~~------sL~I~~v~~~D-~G~Y~C~a~ 203 (558)
+....+.+|+.+.|.|.+.| .|.| .+.|+++|..+....... ....++ .|.|..+..+| .|.|+|.|.
T Consensus 129 ~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~ 208 (240)
T 3q5y_A 129 PSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQ 208 (240)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEE
T ss_pred CchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 34444567999999999999 6666 689999999886532110 111222 48899998888 779999999
Q ss_pred eCCcee
Q psy10160 204 NSYTSD 209 (558)
Q Consensus 204 N~~G~~ 209 (558)
|.....
T Consensus 209 ~~~~~~ 214 (240)
T 3q5y_A 209 FHGLSE 214 (240)
T ss_dssp ECCBCT
T ss_pred cCCCCC
Confidence 976544
No 357
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.26 E-value=1.1e-11 Score=116.97 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=52.6
Q ss_pred EeeCCCcEEEEeEeecc-CC-CeEEEEECCE-EeccCC--------ceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 140 VFGVGSDISIPCDVDGY-PI-PQVFWYKDGQ-VIENDG--------VHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~-~l~~~~--------~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.+.+|+.+.|.|.+.|. |. |.+.|++++. .+.... ..|.. ..+|.|.++.. | |.|+|.|.|..+.
T Consensus 143 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~-~-g~y~C~v~n~~~~ 218 (242)
T 1hxm_B 143 ETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMK--FSWLTVPEKSL-D-KEHRCIVRHENNK 218 (242)
T ss_dssp GGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEE--EEEEEECTGGG-G-SCEEEEEEETTSG
T ss_pred hcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEE--EEEEEEccccC-C-CEEEEEEEeCCCC
Confidence 35679999999999987 65 6899999987 553211 11211 13688887765 5 9999999999987
Q ss_pred eeEEEEEEE
Q psy10160 209 DENAVTIRV 217 (558)
Q Consensus 209 ~~~~~~l~V 217 (558)
......+.+
T Consensus 219 ~~~~~~~~~ 227 (242)
T 1hxm_B 219 NGVDQEIIF 227 (242)
T ss_dssp GGSCEEEEE
T ss_pred CCceeEeec
Confidence 755545544
No 358
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.25 E-value=1.7e-12 Score=119.51 Aligned_cols=150 Identities=15% Similarity=0.111 Sum_probs=94.9
Q ss_pred CCCcEEEEeEeecc-CCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 143 VGSDISIPCDVDGY-PIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 143 ~G~~v~L~C~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
.++.+.|.|.+.+. |.|.+.|+|+|..+..++ ++.+... .+|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~-~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSD-RVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCS-SEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCC-eEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 57788899998885 588999999999987654 4443332 259999999999999999999999988877777664
Q ss_pred ccC-----------------CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhh
Q psy10160 219 GIF-----------------IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAA 281 (558)
Q Consensus 219 ~~~-----------------~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~ 281 (558)
... ..|..... .... ..+..|.... ..|.+.|.|+|.+.|++++........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~------~~v~~g~~~~---l~C~~~g~p~p~v~W~~~~~~~~~~~~ 163 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGG--LPDV------VTIQEGKALN---LTCNVWGDPPPEVSWLKNEKALAQTDH 163 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEB--CCSE------EEEETTCCEE---EEEEEECSSCCEEEEEETTEEECCCSS
T ss_pred eccchhhhccccCcccccccCCCccccc--CCCc------EEEccCCeEE---EEEEEcCCCCceEEEEECCeECccCCC
Confidence 200 01111100 0011 1122333334 455566899999999999765543321
Q ss_pred -hhhh----cccccchhhhhhhHHHhhc
Q psy10160 282 -DKKR----RSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 282 -~~~~----~grth~q~a~~~t~g~~~~ 304 (558)
.... .....+..+.....|.|..
T Consensus 164 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 191 (212)
T 2r15_A 164 CNLKFEAGRTAYFTINGVSTADSGKYGL 191 (212)
T ss_dssp EEEEEETTTEEEEEESSCCGGGCEEEEE
T ss_pred EEEEEcCCCEEEEEEcCcchHHCeEEEE
Confidence 1111 1244555566666665544
No 359
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.25 E-value=2e-11 Score=115.39 Aligned_cols=72 Identities=17% Similarity=0.398 Sum_probs=51.4
Q ss_pred CceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCC---------------ceEEEccCCeEEEccCCCCC-CeEE
Q psy10160 137 ETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDG---------------VHYRITESNRLHINQANATD-SGEY 198 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~---------------~~~~~~~~~sL~I~~v~~~D-~G~Y 198 (558)
....+.+|+.+.|.|.+.|. |.| .+.|+++|..+.... ..|.+ ...|.|.....+| .|.|
T Consensus 132 ~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d~g~~Y 209 (245)
T 3nfj_J 132 SEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYAL--SSRLRVSATFWQNPRNHF 209 (245)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEE--EEEEEEEHHHHTCTTCEE
T ss_pred CcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEE--EEEEEECHHHhccCCCeE
Confidence 33345569999999999995 444 689999999886521 11211 1268888888888 6799
Q ss_pred EEEEEeCCceee
Q psy10160 199 RCVASNSYTSDE 210 (558)
Q Consensus 199 ~C~a~N~~G~~~ 210 (558)
+|.|.|......
T Consensus 210 tC~v~~~~~~~~ 221 (245)
T 3nfj_J 210 RCQVQFYGLSEN 221 (245)
T ss_dssp EEEEEECCBCSS
T ss_pred EEEEEECCCCCc
Confidence 999999865543
No 360
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.25 E-value=1.1e-11 Score=107.09 Aligned_cols=89 Identities=16% Similarity=0.301 Sum_probs=70.4
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEE---------CCEEeccCCceEEEcc----CCeEEEccCCCCCCeEEE
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYK---------DGQVIENDGVHYRITE----SNRLHINQANATDSGEYR 199 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~---------~g~~l~~~~~~~~~~~----~~sL~I~~v~~~D~G~Y~ 199 (558)
...+....+.+|+.++|.|.+.+.|.|.+.|++ ++..+. ..++.... +.+|.|.+++.+|+|.|+
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~--~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 119 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR--DNRIQLVTSTPHELSISISNVALADEGEYT 119 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC--CTTEEEEEECSSEEEEEECSCCGGGCEEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc--cCCEEEecCCCCeEEEEECCCChhhCEEEE
Confidence 456677889999999999999999999999994 333332 23444332 458999999999999999
Q ss_pred EEEEeCCceeeEEEEEEEeccCCCC
Q psy10160 200 CVASNSYTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 200 C~a~N~~G~~~~~~~l~V~~~~~~p 224 (558)
|.+.|. |.....+.|.|..+|.+|
T Consensus 120 C~~~n~-~~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 120 CSIFTM-PVRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp EEECSS-SCEEEEEEEEEECCCC--
T ss_pred EEEEcC-CCceEEEEEEEEeCCCCC
Confidence 999999 988999999998766444
No 361
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.24 E-value=1e-10 Score=106.49 Aligned_cols=119 Identities=15% Similarity=0.230 Sum_probs=81.1
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEEeCCCCccCCCCccccCceeEEeccCCCCCCcEEEEeCCcccC
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQALPSEKVADPNAIDYGTILSSAFPSESASPVVTQTTTTTTEA 90 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~~~p~~~~~~~~~v~~~~~~~~~~~~~~p~p~v~W~~~~~~~~ 90 (558)
.+..|.|.+++.+|+|.|.|++.|..+... +..|+|..+|...
T Consensus 57 ~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~------------------------------------ 100 (210)
T 1gsm_A 57 GRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQL------------------------------------ 100 (210)
T ss_dssp SEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEE------------------------------------
T ss_pred CccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCc------------------------------------
Confidence 456899999999999999999999887653 5666666554321
Q ss_pred CCCceeeccccceeeceeEEeeccceeeEEeeeceeeeCcEEEecCCceEeeCCCcEEEEeEeecc-CC----CeEEEEE
Q psy10160 91 TSPHVYAALTHCVPWSNVCLFGARSGYLKETQNGGYLVPVKVNITLETQVFGVGSDISIPCDVDGY-PI----PQVFWYK 165 (558)
Q Consensus 91 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~----p~i~W~~ 165 (558)
.+.+. .+.+|+.+ |.|.+.|. |. |+|.|+|
T Consensus 101 ------------------------------------------~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk 135 (210)
T 1gsm_A 101 ------------------------------------------TVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLV 135 (210)
T ss_dssp ------------------------------------------EEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEE
T ss_pred ------------------------------------------EEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEE
Confidence 11121 45678888 99999985 74 4899999
Q ss_pred CCEEeccCCc---eEEE----c---cC------CeEEEccCCCCCCeEEEEEEEeCCceeeE
Q psy10160 166 DGQVIENDGV---HYRI----T---ES------NRLHINQANATDSGEYRCVASNSYTSDEN 211 (558)
Q Consensus 166 ~g~~l~~~~~---~~~~----~---~~------~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~ 211 (558)
++.++..... .... . .. ++|.+.....+|.+.|+|.|.+..-....
T Consensus 136 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~ 197 (210)
T 1gsm_A 136 GGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLEL 197 (210)
T ss_dssp TTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEE
T ss_pred CCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCcc
Confidence 9999864320 1110 0 11 13444456666778999999997654433
No 362
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.24 E-value=9.3e-12 Score=114.78 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=84.3
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEec---c--------CCceEEE---ccCCeEEEccCCCCCCe
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIE---N--------DGVHYRI---TESNRLHINQANATDSG 196 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~---~--------~~~~~~~---~~~~sL~I~~v~~~D~G 196 (558)
..++ ...+.+|+.++|.|.+.|.|.|.+.|+|. +.... . ...++.+ ..+.+|.|.+++.+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (213)
T 3mj8_L 5 TQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEA 83 (213)
T ss_dssp BCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCE
Confidence 3445 67789999999999999999999999982 21110 0 1224442 22347999999999999
Q ss_pred EEEEEEEeCCc---eeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CC-Cccccc
Q psy10160 197 EYRCVASNSYT---SDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LP-SYGPHI 270 (558)
Q Consensus 197 ~Y~C~a~N~~G---~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~-~~~~w~ 270 (558)
.|+|.+.|..| .....+.|.|...+ .+|.+...+. ...... +......|.+.|. |+ +.+.|+
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~---------~~~~~~---g~~v~l~C~~~g~~p~~~~v~W~ 151 (213)
T 3mj8_L 84 DYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPP---------SSEELK---TNQATLVCMINGFYPADVAVTWE 151 (213)
T ss_dssp EEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECC---------CHHHHT---TTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCC---------Cccccc---CCcEEEEEEeeceeCCCeEEEEE
Confidence 99999999998 44566778886433 2232221110 000112 2333345555564 33 389999
Q ss_pred chhhhhh
Q psy10160 271 KRAVEAE 277 (558)
Q Consensus 271 ~~~l~~~ 277 (558)
+++..+.
T Consensus 152 k~g~~l~ 158 (213)
T 3mj8_L 152 ADGTPIT 158 (213)
T ss_dssp ETTEEEC
T ss_pred cCCcccC
Confidence 9976554
No 363
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.24 E-value=6.2e-12 Score=119.50 Aligned_cols=138 Identities=16% Similarity=0.170 Sum_probs=87.5
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC-----CCeEEEEECC--EEe-----------ccCCceEEEccC---CeEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP-----IPQVFWYKDG--QVI-----------ENDGVHYRITES---NRLHI 187 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-----~p~i~W~~~g--~~l-----------~~~~~~~~~~~~---~sL~I 187 (558)
++.+...+....+.+|+.++|.|.+.|.| .|.+.|+|++ ..+ .....++.+... .+|.|
T Consensus 38 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 117 (254)
T 2c1o_A 38 ELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKI 117 (254)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEE
Confidence 56667778888999999999999999998 4899999843 221 111235554432 27999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC-
Q psy10160 188 NQANATDSGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS- 265 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~- 265 (558)
.+++.+|+|.|+|.|.|..+.. .....+.|.....+|.+...+.. . ....+ ......|.+.|.+++
T Consensus 118 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~-------~~~~g---~~v~l~C~~~g~~p~~ 185 (254)
T 2c1o_A 118 SRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPS--S-------EQLTS---GGASVVCFLNNFYPKD 185 (254)
T ss_dssp SSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCC--H-------HHHHT---TEEEEEEEEEEEBSSC
T ss_pred CcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCC--h-------hhccC---CcEEEEEEEecccCCC
Confidence 9999999999999999987643 23346677543333332211100 0 00111 233455656564444
Q ss_pred -cccccchhhhhhh
Q psy10160 266 -YGPHIKRAVEAEA 278 (558)
Q Consensus 266 -~~~w~~~~l~~~~ 278 (558)
.+.|++++.....
T Consensus 186 ~~v~W~k~g~~l~~ 199 (254)
T 2c1o_A 186 INVKWKIDGSERQN 199 (254)
T ss_dssp CEEEEEESSSEECT
T ss_pred cEEEEEECCCcccC
Confidence 4899999765543
No 364
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.24 E-value=3.6e-12 Score=117.25 Aligned_cols=67 Identities=18% Similarity=0.361 Sum_probs=47.5
Q ss_pred eCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 142 GVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.+|+.+.|.|.+.|. |.| .+.|+|+|..+.... .++....++ .|.|.....+|.|.|+|.|.|....
T Consensus 122 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 122 MAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp GSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred hcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 368999999999995 543 899999999875321 112223344 3556556667899999999998643
No 365
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.24 E-value=1.4e-11 Score=114.23 Aligned_cols=123 Identities=19% Similarity=0.265 Sum_probs=83.6
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCC-----eEEEEECCEEecc--C------------CceEEEccC------CeEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIP-----QVFWYKDGQVIEN--D------------GVHYRITES------NRLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p-----~i~W~~~g~~l~~--~------------~~~~~~~~~------~sL~I~~ 189 (558)
++....+.+|+.+.|.|.+.|.|.+ .+.|+|++..+.. . ..+..+..+ .+|.|.+
T Consensus 7 p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 7 PKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp SCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 3455678899999999999888844 7999997633210 0 123333322 3799999
Q ss_pred CCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccc
Q psy10160 190 ANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPH 269 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w 269 (558)
++.+|+|.|+|.+.| .|.....+.|.|..++..|... +. ..... +......|.+.|.|+|.+.|
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~---------~~---~~~~~---g~~v~L~C~~~g~P~p~i~W 150 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQR---------IL---VVDPV---TSEHELTCQAEGYPKAEVIW 150 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEE---------EE---EEETT---TTEEEEEEEEEEBSCCEEEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCce---------ee---eeecC---CCcEEEEEEecCCCCCeEEE
Confidence 999999999999999 6777788899997554222111 00 01122 23333455566899999999
Q ss_pred cchh
Q psy10160 270 IKRA 273 (558)
Q Consensus 270 ~~~~ 273 (558)
+++.
T Consensus 151 ~~~~ 154 (222)
T 3sbw_C 151 TSSD 154 (222)
T ss_dssp EETT
T ss_pred EECC
Confidence 9984
No 366
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.23 E-value=8.8e-12 Score=116.83 Aligned_cols=76 Identities=13% Similarity=0.207 Sum_probs=50.7
Q ss_pred eEeeCCCcEEEEeEeeccCCC--eEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 139 QVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
..+..|+.+.|.|.+.|.+++ .+.|++++..+.. .+..|.. .+.|.|.....+| |.|+|.|.|..+.
T Consensus 142 ~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-g~ytC~v~~~~~~ 218 (232)
T 3qhz_H 142 SKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSN 218 (232)
T ss_dssp ------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE--EEEEEEEGGGGGT-CCCEEEEEEGGGT
T ss_pred ccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEE--EEEEEEchhhcCC-CEEEEEEEeCCCC
Confidence 345579999999999986543 4779998864321 1112221 1368899998889 9999999999887
Q ss_pred eeEEEEEEE
Q psy10160 209 DENAVTIRV 217 (558)
Q Consensus 209 ~~~~~~l~V 217 (558)
......|.+
T Consensus 219 ~~~~~~l~~ 227 (232)
T 3qhz_H 219 TKVDKRVEP 227 (232)
T ss_dssp EEEEEECCC
T ss_pred ccEEEEeCC
Confidence 776666655
No 367
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.23 E-value=1.3e-11 Score=118.94 Aligned_cols=197 Identities=14% Similarity=0.093 Sum_probs=56.8
Q ss_pred eEEEcCCCCCCCEEEEEEEEeCCcceE--EEEEEEEeCCCCccCCCC--ccccC-ceeEEeccCCC-CCC--cEEEEeCC
Q psy10160 15 MLTIKRVEPERLGAYTCQAYNGLGRAV--SWTVTLQALPSEKVADPN--AIDYG-TILSSAFPSES-ASP--VVTQTTTT 86 (558)
Q Consensus 15 ~L~I~~v~~~D~G~Y~C~a~n~~g~~~--s~~l~V~~~p~~~~~~~~--~v~~~-~~~~~~~~~~~-p~p--~v~W~~~~ 86 (558)
.|.|.+++.+ |.|+|++.. .|... ++.+.|..+|..+...+. .+..| ...+.|.+.+. |.+ .|+|++++
T Consensus 51 ~~~l~~v~~~--~~y~C~~~~-~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~ 127 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSNC-PDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (291)
T ss_dssp EEEEESCCSC--CCCEEEEEC-SSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSS
T ss_pred EEEEEecccC--CeEEEEEEc-CCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECC
Confidence 5899998853 469999964 44444 445566566665554443 35555 55578887776 433 48999998
Q ss_pred cccCCCCcee---eccc------cceeeceeEEeecccee----e----EEeeeceeeeCcEE--EecCCceEeeCCCcE
Q psy10160 87 TTEATSPHVY---AALT------HCVPWSNVCLFGARSGY----L----KETQNGGYLVPVKV--NITLETQVFGVGSDI 147 (558)
Q Consensus 87 ~~~~~~~~~~---~g~~------~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~p~~~--~~~~~~~~v~~G~~v 147 (558)
..+....... .... ...--.+.|.+.+.... + .....+.+.++|.. .+.. +..+++|+.+
T Consensus 128 ~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~-p~~l~eG~~v 206 (291)
T 1mq8_A 128 KELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS-PRVLEVDTQG 206 (291)
T ss_dssp SEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------
T ss_pred EEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC-CcCccCCCeE
Confidence 6654222100 0000 00011345666554221 1 11123334344321 1111 2357899999
Q ss_pred EEEeEeeccCCC---eEEEEECCEEeccCCceEEEccCCeEEEccC---CCCC--CeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 148 SIPCDVDGYPIP---QVFWYKDGQVIENDGVHYRITESNRLHINQA---NATD--SGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 148 ~L~C~~~g~P~p---~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v---~~~D--~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
+|.|.+.|+|++ .+.|+++|..+.... ...+..+.+... ..+| .+.|+|.|.|.....+....|.|..
T Consensus 207 ~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 207 TVVCSLDGLFPVSEAQVHLALGDQRLNPTV----TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEcCCCCCCcccEEEEEECCEecCcee----eecCCeEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 999999998665 489999998886421 112234444433 3444 5677788888655566777777754
No 368
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.23 E-value=9.3e-12 Score=124.12 Aligned_cols=81 Identities=15% Similarity=0.207 Sum_probs=57.6
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeecc-CC-CeEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEY 198 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y 198 (558)
+|.+...+....+.+|+.+.|.|.+.|. |. |.+.|+|++..+.. .+.+|.. .+.|.|.++..+| |.|
T Consensus 120 ~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~--~s~L~i~~~~~~d-G~Y 196 (344)
T 1za6_B 120 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTY 196 (344)
T ss_dssp CCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEE--EEEEEEETTHHHH-BCE
T ss_pred CCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEE--EEEEEEcHHHcCC-CcE
Confidence 4455444333446799999999999997 65 68999999875321 1112222 2379999998888 999
Q ss_pred EEEEEeCCceeeEE
Q psy10160 199 RCVASNSYTSDENA 212 (558)
Q Consensus 199 ~C~a~N~~G~~~~~ 212 (558)
+|.|.|..|.....
T Consensus 197 ~C~a~n~~~~~~~~ 210 (344)
T 1za6_B 197 ICNVNHKPSNTKVD 210 (344)
T ss_dssp EEEEEEGGGTEEEE
T ss_pred EEEEEeCCCCccce
Confidence 99999998875433
No 369
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.22 E-value=2.3e-11 Score=108.56 Aligned_cols=148 Identities=15% Similarity=0.154 Sum_probs=95.1
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCC-eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIP-QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+|.+...+....+.+|+.+.|.|.+.+.|.| .+.|++++..+.. .+++|.|.+++.+|+|.|+|.+.|..
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~~~~~~ 74 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE--------TNSSLNIVNAKFEDSGEYKCQHQQVN 74 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSC--------CSSEEEECSCCGGGCEEEEEECTTSS
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCC--------CceEEEEeccceecCEEEEEEcCCcc
Confidence 46677777888889999999999999999887 5999999988753 35689999999999999999999976
Q ss_pred ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhc
Q psy10160 207 TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRR 286 (558)
Q Consensus 207 G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~ 286 (558)
++. .+.|.|..++ ..... ....+..|......|... .+.|.+.+.|++++....... ..
T Consensus 75 ~s~--~~~l~V~~~~---~~~~~----------~~~~~~~g~~~~l~C~~~--~~~p~~~~~W~~~g~~~~~~~----~~ 133 (176)
T 1f2q_A 75 ESE--PVYLEVFSDW---LLLQA----------SAEVVMEGQPLFLRCHGW--RNWDVYKVIYYKDGEALKYWY----EN 133 (176)
T ss_dssp CCC--CEEEEEECSS---EEEEE----------SCSEEETTSCEEEEEEEG--GGCCEEEEEEEETTEECCSCC----CS
T ss_pred ccc--cEEEEEeCcc---eeecC----------CcceeeCCCCEEEEEEec--CCCCceEEEEEECCEEEeeec----CC
Confidence 644 4556664211 11100 111223334445455431 357778999999875442111 12
Q ss_pred ccccchhhhhhhHHHhhc
Q psy10160 287 SRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 287 grth~q~a~~~t~g~~~~ 304 (558)
+..++..+.....|.|..
T Consensus 134 ~~L~i~~v~~~d~G~Y~C 151 (176)
T 1f2q_A 134 HNISITNATVEDSGTYYC 151 (176)
T ss_dssp SEEEESSCCGGGCEEEEE
T ss_pred CeEEECCCCcccCEEEEE
Confidence 334455555555565544
No 370
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.22 E-value=9.1e-11 Score=109.27 Aligned_cols=125 Identities=17% Similarity=0.146 Sum_probs=80.7
Q ss_pred CCceEeeCCCcEEEEeEeeccCCC---eEEEEECCEEe-----------ccC-----CceEEEc------cCCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIP---QVFWYKDGQVI-----------END-----GVHYRIT------ESNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p---~i~W~~~g~~l-----------~~~-----~~~~~~~------~~~sL~I~~v 190 (558)
..+..+.+|++++|.|.+.+.|.| .|.|+|++... ... ..+.... .+.+|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 445778999999999999987766 59999876321 110 0122211 1247999999
Q ss_pred CCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCCcccc
Q psy10160 191 NATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPSYGPH 269 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~~~~w 269 (558)
+.+|+|.|+|.|.|..|.....+.+.+..+...+. ..... .. +......|.+.| .|+|.+.|
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~--------~~~~~------~~---g~~v~l~c~~~g~~P~p~i~W 153 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVAALGSDLH--------VDVKG------YK---DGGIHLECRSTGWYPQPQIQW 153 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCCE--------EEEEE------EE---TTEEEEEEEEEEEBSCCEEEE
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeeccceeccc--------ceeee------cc---CCceeeEEEeccCCCCCEEEE
Confidence 99999999999999998887777766643221110 00111 11 223334455546 59999999
Q ss_pred cchhhhhh
Q psy10160 270 IKRAVEAE 277 (558)
Q Consensus 270 ~~~~l~~~ 277 (558)
+++.....
T Consensus 154 ~k~~~~~~ 161 (226)
T 4f80_A 154 SNNKGENI 161 (226)
T ss_dssp ECTTSCBC
T ss_pred EECCceEc
Confidence 98754443
No 371
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.22 E-value=1.6e-11 Score=113.19 Aligned_cols=135 Identities=12% Similarity=0.187 Sum_probs=85.2
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC---EE--e--------ccCCceEEEcc---CCeEEEccCCCCC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG---QV--I--------ENDGVHYRITE---SNRLHINQANATD 194 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g---~~--l--------~~~~~~~~~~~---~~sL~I~~v~~~D 194 (558)
.+...+....+.+|+.+.|.|.+.+.|.|.+.|+|.+ .. + .....++.+.. +.+|.|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 3445567788999999999999999999999999832 10 1 01123454432 3389999999999
Q ss_pred CeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC--Ccccccc
Q psy10160 195 SGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP--SYGPHIK 271 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~--~~~~w~~ 271 (558)
+|.|+|.+.|..+.. .....|.|..+..+|.+...+. . .....+ ......|.+.|.++ +.+.|++
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~-------~~~~~~---~~v~l~C~~~g~~p~~~~v~W~k 150 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPP--S-------SEQLGT---GSATLVCFVNNFYPKDINVKWKV 150 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECC--C-------HHHHTT---TEEEEEEEEEEEBSSCEEEEEEE
T ss_pred CEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCC--C-------ceecCC---CCcEEEEEEeeecCCceEEEEEE
Confidence 999999999986533 3446677754443343321110 0 000111 12334555556554 3789999
Q ss_pred hhhhhh
Q psy10160 272 RAVEAE 277 (558)
Q Consensus 272 ~~l~~~ 277 (558)
++....
T Consensus 151 ~g~~l~ 156 (213)
T 3r06_A 151 DGSEKR 156 (213)
T ss_dssp TTEEEC
T ss_pred CCcccC
Confidence 976543
No 372
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=1.9e-11 Score=98.38 Aligned_cols=79 Identities=27% Similarity=0.566 Sum_probs=64.2
Q ss_pred CceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCCceeeEEE
Q psy10160 137 ETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNSYTSDENAV 213 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 213 (558)
....+.+|+.+.|.|.+. .|.|.+.|+|++..+..+. ++.+..++ +|.|.+++.+|+|.|+|.|.| ...++
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~ 92 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSS-KVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSF 92 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCS-SEEEEEETTEEEEEETTCCTTTCSCEEEEETT----EECCE
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCC-CEEEEEcCCEEEEEECCCCcccCEEEEEEcCC----CcEEE
Confidence 345788999999999998 8999999999999987654 55554443 799999999999999999954 45567
Q ss_pred EEEEeccC
Q psy10160 214 TIRVEGIF 221 (558)
Q Consensus 214 ~l~V~~~~ 221 (558)
.|.|..++
T Consensus 93 ~l~V~~p~ 100 (102)
T 2eo1_A 93 RLQVAGQC 100 (102)
T ss_dssp EEEEESCC
T ss_pred EEEEeCCC
Confidence 88886554
No 373
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.22 E-value=1.1e-11 Score=114.35 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=85.7
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EEe----------c-cCCceEEEccC---CeEEEccCCCCCCe
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QVI----------E-NDGVHYRITES---NRLHINQANATDSG 196 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~l----------~-~~~~~~~~~~~---~sL~I~~v~~~D~G 196 (558)
...+....+.+|+.+.|.|.+.|.|.|.+.|+|++ ..+ . ....++.+... .+|.|.+++.+|+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 84 (213)
T 3d9a_L 5 TQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFG 84 (213)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCE
Confidence 34466778899999999999999999999999853 211 0 11135544422 38999999999999
Q ss_pred EEEEEEEeCCceee-EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCC-cccccchh
Q psy10160 197 EYRCVASNSYTSDE-NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPS-YGPHIKRA 273 (558)
Q Consensus 197 ~Y~C~a~N~~G~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~-~~~w~~~~ 273 (558)
.|+|.+.|..|... ....|.|.....+|.+...+.. ..... +......|.+.| .|++ .+.|++++
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~---------~~~~~---g~~~~l~C~~~g~~p~~~~v~W~k~g 152 (213)
T 3d9a_L 85 MYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPS---------SEQLT---SGGASVVCFLNNFYPKDINVKWKIDG 152 (213)
T ss_dssp EEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCC---------HHHHH---TTEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCC---------hhhcC---CCcEEEEEEEeeecCCceEEEEEcCC
Confidence 99999999987643 3456777544333332211100 00011 223445565555 4554 79999997
Q ss_pred hhhhh
Q psy10160 274 VEAEA 278 (558)
Q Consensus 274 l~~~~ 278 (558)
.....
T Consensus 153 ~~~~~ 157 (213)
T 3d9a_L 153 SERQN 157 (213)
T ss_dssp EEECT
T ss_pred CcCcc
Confidence 65543
No 374
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.21 E-value=4e-11 Score=115.76 Aligned_cols=71 Identities=14% Similarity=0.325 Sum_probs=50.0
Q ss_pred eEeeCCCcEEEEeEeecc-CC-CeEEEEECCEEeccCCceEE------E--ccCC------eEEEccCCCCC-CeEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIENDGVHYR------I--TESN------RLHINQANATD-SGEYRCV 201 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~------~--~~~~------sL~I~~v~~~D-~G~Y~C~ 201 (558)
..+.+|+.+.|.|.+.|. |. |.+.|+|+|..+.... ... + ..++ .|.|.+...+| .|.|+|.
T Consensus 160 ~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~ 238 (279)
T 2wbj_D 160 AEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV-STDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQ 238 (279)
T ss_dssp HHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTE-EECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEE
T ss_pred ccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCc-ccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEE
Confidence 345579999999999997 43 6899999998876431 110 0 0222 47887777654 7789999
Q ss_pred EEeCCceee
Q psy10160 202 ASNSYTSDE 210 (558)
Q Consensus 202 a~N~~G~~~ 210 (558)
|.|......
T Consensus 239 v~n~~~~~~ 247 (279)
T 2wbj_D 239 VQFYGLSEN 247 (279)
T ss_dssp EEECCBCTT
T ss_pred EEeCCCCCC
Confidence 999865543
No 375
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.20 E-value=1.4e-11 Score=112.60 Aligned_cols=133 Identities=12% Similarity=0.148 Sum_probs=86.4
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc--eEE-EccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV--HYR-ITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~--~~~-~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.+|.+...+. ..+.+|+.++|.|.+.+ |.|.+.|+|+|..+..... ++. ...+++|.|.+++.+|+|.|+|.+.|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~ 84 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSV 84 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEB
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEec
Confidence 3566666665 67889999999999975 7889999999876542110 111 11245799999999999999999987
Q ss_pred CC-----ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 205 SY-----TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 205 ~~-----G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
.. ...+..+.|.|.+.+..|.+...+ . ..+..|.... ..|.+.+ +++.+.|++++...
T Consensus 85 ~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p---~-------~~v~~G~~v~---L~C~~~~-~~~~~~w~k~g~~~ 147 (201)
T 1nkr_A 85 THSPYQVSAPSDPLDIVIIGLYEKPSLSAQP---G-------PTVLAGENVT---LSCSSRS-SYDMYHLSREGEAH 147 (201)
T ss_dssp TTBTTCCCCCCCCEEEEEECSSCCCEEEEES---C-------SEECTTCEEE---EEEEESS-CCSEEEEEETTCSS
T ss_pred CCCCccccCCCCCEEEEeeccCCCCceecCC---C-------CccCCCCeEE---EEEeCCC-CCceEEEEECCccc
Confidence 53 233566788887654333332211 1 1223333344 4454534 56788999987544
No 376
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.19 E-value=1.2e-10 Score=107.23 Aligned_cols=126 Identities=19% Similarity=0.336 Sum_probs=84.9
Q ss_pred cCCceEeeCCCcEEEEeEeecc-------CCCeEEEEECCEE------ec----------cCCceEEEcc-----CCeEE
Q psy10160 135 TLETQVFGVGSDISIPCDVDGY-------PIPQVFWYKDGQV------IE----------NDGVHYRITE-----SNRLH 186 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~-------P~p~i~W~~~g~~------l~----------~~~~~~~~~~-----~~sL~ 186 (558)
.+....+.+|+.+.|.|.+.+. |.+.+.|+|++.. +. ....++.+.. +.+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 4566788999999999999864 5778999998652 10 1123555543 34799
Q ss_pred EccCCCCCCeEEEEEEEeCCceee----EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-
Q psy10160 187 INQANATDSGEYRCVASNSYTSDE----NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG- 261 (558)
Q Consensus 187 I~~v~~~D~G~Y~C~a~N~~G~~~----~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g- 261 (558)
|.+++.+|+|.|.|.+.|..+... ..+.|.|.+++..|.+.... . +..|.... ..|.+.+
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-----~-------~~~G~~v~---L~C~~~~~ 150 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLE-----P-------LESGRPTR---LSCSLPGS 150 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC--C-----C-------CCTTCCEE---EEEECTTC
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceecCc-----c-------ccCCCeEE---EEEEeccC
Confidence 999999999999999999874332 46788887665444432110 0 12222333 4555544
Q ss_pred ---CCCCcccccchhhh
Q psy10160 262 ---QLPSYGPHIKRAVE 275 (558)
Q Consensus 262 ---~~~~~~~w~~~~l~ 275 (558)
.|+|.+.|++++..
T Consensus 151 ~~~~p~p~v~W~~~~~~ 167 (214)
T 2zg1_A 151 CEAGPPLTFSWTGNALS 167 (214)
T ss_dssp CSCSSCCEEEEESSTTS
T ss_pred CCCCCCceEEEeCCCCc
Confidence 48899999999754
No 377
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.19 E-value=8.1e-12 Score=115.91 Aligned_cols=67 Identities=19% Similarity=0.311 Sum_probs=47.1
Q ss_pred eCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCC-ceEEEccCCe------EEEccCCCCCCeEEEEEEEeCCce
Q psy10160 142 GVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDG-VHYRITESNR------LHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 142 ~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~-~~~~~~~~~s------L~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.+|+.+.|.|.+.| +|.| .|.|+|+|..+.... .++....+++ |.|.....+|.|.|+|.|.|....
T Consensus 130 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 130 LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred hcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 36999999999999 6776 899999999874321 1122234443 444444455799999999998654
No 378
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.19 E-value=1.4e-11 Score=110.90 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=89.3
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc-------------CCceEEEcc------CCeEEEccCCCCCCeEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN-------------DGVHYRITE------SNRLHINQANATDSGEY 198 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~-------------~~~~~~~~~------~~sL~I~~v~~~D~G~Y 198 (558)
...+.+|+.+.|.|.+.+.|.|.+.|+|++..+.. ...++.... ..+|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 45678999999999999999999999999853211 012333332 33599999999999999
Q ss_pred EEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhh
Q psy10160 199 RCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEA 278 (558)
Q Consensus 199 ~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~ 278 (558)
+|.+.|..| .+.|.|.....++. . .+ .. +......|.+.+.|+|.+.|++++...
T Consensus 84 ~C~~~~~~~----~~~l~V~~~~~~~~---------~-~v------~~---g~~~~l~C~~~~~p~~~v~W~~~~~~~-- 138 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGLTANSD---------T-HL------LQ---GQSLTLTLESPPGSSPSVQCRSPRGKN-- 138 (184)
T ss_dssp EEEETTEEE----EEEEEEEEEEESSC---------S-EE------ET---TCCEEEEEECCTTCCCEEEEECTTSCE--
T ss_pred EEEEEcCCC----cEEEEEEEecCCCC---------c-ee------ec---CCCEEEEEEcCCCCCCEEEEEeCCCcc--
Confidence 999998765 45566653221111 1 11 22 223335566667899999999885432
Q ss_pred hhhhhhhcccccchhhhhhhHHHhhc
Q psy10160 279 AAADKKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 279 ~~~~~~~~grth~q~a~~~t~g~~~~ 304 (558)
....+..++..+.....|.|..
T Consensus 139 ----~~~~~~L~i~~v~~~d~G~Y~C 160 (184)
T 2ny1_B 139 ----IQGGKTLSVSQLELQDSGTWTC 160 (184)
T ss_dssp ----EEESSEEEESSCCGGGCEEEEE
T ss_pred ----ccCceEEEEecCCcCCCeEEEE
Confidence 1123444555555566665554
No 379
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.19 E-value=3.3e-11 Score=125.87 Aligned_cols=87 Identities=20% Similarity=0.424 Sum_probs=73.4
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEecc--CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCcee
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIEN--DGVHYRITESNRLHINQANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~--~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+.. ...++.+..+++|.|.+++.+|+|.|+|.|.|..|..
T Consensus 388 ~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 467 (477)
T 2id5_A 388 RDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGND 467 (477)
T ss_dssp SCCSCEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred cccccccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCCcE
Confidence 33445677889999999999999999999999999987753 2346667778899999999999999999999999999
Q ss_pred eEEEEEEEe
Q psy10160 210 ENAVTIRVE 218 (558)
Q Consensus 210 ~~~~~l~V~ 218 (558)
+..+.|.|.
T Consensus 468 ~~~~~l~V~ 476 (477)
T 2id5_A 468 SMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 999999885
No 380
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.18 E-value=3e-11 Score=113.20 Aligned_cols=135 Identities=13% Similarity=0.168 Sum_probs=86.2
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E-----------EeccCCceEEEc---cCCeEEEccCCCCC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q-----------VIENDGVHYRIT---ESNRLHINQANATD 194 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~-----------~l~~~~~~~~~~---~~~sL~I~~v~~~D 194 (558)
.+...+....+.+|+.+.|.|.+.+.|.|.+.|+|.+ . .......++... .+.+|.|.+++.+|
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 105 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPED 105 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 4455567788999999999999999999999999832 1 111112355443 33479999999999
Q ss_pred CeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-C-CCcccccc
Q psy10160 195 SGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-L-PSYGPHIK 271 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~-~~~~~w~~ 271 (558)
+|.|+|.+.|..+.. .....|.|.....+|.+...+. . ..... +......|.+.+. | .+.+.|++
T Consensus 106 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~-------~~~~~---g~~v~l~C~~~~~~p~~~~v~W~k 173 (237)
T 3sob_L 106 FATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPP--S-------DEQLK---SGTASVVCLLNNFYPREAKVQWKV 173 (237)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECC--C-------HHHHH---HTEEEEEEEEEEEBSSCCEEEEEE
T ss_pred CeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCC--C-------hhhcc---CCceEEEEEEcccCCCceEEEEEE
Confidence 999999999987643 3445677755443333321110 0 00011 2223355655563 3 48999999
Q ss_pred hhhhhh
Q psy10160 272 RAVEAE 277 (558)
Q Consensus 272 ~~l~~~ 277 (558)
++....
T Consensus 174 ~g~~~~ 179 (237)
T 3sob_L 174 DNALQS 179 (237)
T ss_dssp TTEECC
T ss_pred CCCCCC
Confidence 876544
No 381
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.18 E-value=2.5e-11 Score=111.64 Aligned_cols=130 Identities=14% Similarity=0.142 Sum_probs=83.1
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EEe-----------ccCCceEEEccC---CeEEEccCCCCCCeEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QVI-----------ENDGVHYRITES---NRLHINQANATDSGEYR 199 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~l-----------~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~ 199 (558)
|....+.+|+.+.|.|.+.|.|.|.+.|+|++ ..+ .....++.+... .+|.|.+++.+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 66778899999999999999999999999842 221 011235544322 38999999999999999
Q ss_pred EEEEeCCceee-EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC-cccccchhhhh
Q psy10160 200 CVASNSYTSDE-NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS-YGPHIKRAVEA 276 (558)
Q Consensus 200 C~a~N~~G~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~-~~~w~~~~l~~ 276 (558)
|.+.|..+... ....|.|.....+|.+...+. .. .... +......|.+.|. |++ .+.|++++...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~--~~-------~~~~---g~~v~l~C~~~g~~p~~~~v~W~k~g~~~ 154 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADAAPTVSIFPP--ST-------EQLA---TGGASVVCLMNNFYPRDISVKWKIDGTER 154 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCBCCEEEEECC--CH-------HHHT---TTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred EEEEcCCCceeCCCEEEEEcCCCcCCeEEEECC--ch-------hhcc---CCcEEEEEEEEeEeCCceEEEEEeCCccC
Confidence 99999887542 345677754333333221110 00 0011 2233355555553 443 78999997654
Q ss_pred h
Q psy10160 277 E 277 (558)
Q Consensus 277 ~ 277 (558)
.
T Consensus 155 ~ 155 (210)
T 1lk3_L 155 R 155 (210)
T ss_dssp C
T ss_pred C
Confidence 4
No 382
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.18 E-value=2.8e-11 Score=111.89 Aligned_cols=133 Identities=11% Similarity=0.180 Sum_probs=82.7
Q ss_pred EEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECC--EE-------------ecc--CCceEEEc---cCCeEEEccC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDG--QV-------------IEN--DGVHYRIT---ESNRLHINQA 190 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g--~~-------------l~~--~~~~~~~~---~~~sL~I~~v 190 (558)
+...+ ...+.+|+.+.|.|.+.+. |.|.+.|+|.. .. ... ...++.+. .+.+|.|.++
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI 82 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccC
Confidence 33445 7778999999999999999 99999999832 10 000 01244432 2347999999
Q ss_pred CCCCCeEEEEEEEeCCc-----eeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CC
Q psy10160 191 NATDSGEYRCVASNSYT-----SDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QL 263 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G-----~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~ 263 (558)
+.+|+|.|.|.+.|..| .....+.|.|...+ .+|.+...+ . ......+ ......|.+.| .|
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~---~------~~~~~~~---~~v~L~C~~~g~~p 150 (218)
T 3s96_B 83 QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFP---P------SSEELKE---NKATLVCLISNFSP 150 (218)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEEC---C------CHHHHHT---TEEEEEEEEEEEBS
T ss_pred CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeC---C------CcccccC---CcEEEEEEECcccC
Confidence 99999999999999887 33455678886433 222221100 0 0001111 22334555556 46
Q ss_pred CC-cccccchhhhhh
Q psy10160 264 PS-YGPHIKRAVEAE 277 (558)
Q Consensus 264 ~~-~~~w~~~~l~~~ 277 (558)
++ .+.|++++....
T Consensus 151 ~~~~v~W~k~g~~l~ 165 (218)
T 3s96_B 151 SGVTVAWKANGTPIT 165 (218)
T ss_dssp SCCEEEEEETTEEC-
T ss_pred CCeEEEEEECCEECc
Confidence 66 799999876554
No 383
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.18 E-value=2.7e-11 Score=114.12 Aligned_cols=77 Identities=14% Similarity=0.283 Sum_probs=52.6
Q ss_pred ceEeeCCCcEEEEeEeec-cCCC-eEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 138 TQVFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
...+..|+.+.|.|.+.| .|.| .+.|++++..+.. .+..|.+ .+.|.|.....+| |.|+|.|.|..+
T Consensus 149 ~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-~~ytC~v~h~~~ 225 (239)
T 3tv3_H 149 SSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPS 225 (239)
T ss_dssp CCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE--EEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred ChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEE--EEEEEEchhhcCC-CEEEEEEEECCC
Confidence 334557999999999998 4544 3889998864321 1112222 1368899988889 999999999987
Q ss_pred eeeEEEEEEE
Q psy10160 208 SDENAVTIRV 217 (558)
Q Consensus 208 ~~~~~~~l~V 217 (558)
.......|.+
T Consensus 226 ~~~~~~~l~~ 235 (239)
T 3tv3_H 226 NTKVDKRVEP 235 (239)
T ss_dssp TEEEEEECCC
T ss_pred CceEEEEecc
Confidence 7666555554
No 384
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.18 E-value=5.8e-11 Score=122.59 Aligned_cols=94 Identities=18% Similarity=0.333 Sum_probs=76.1
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEe-ccC--CceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVI-END--GVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l-~~~--~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
+|.+...+....+.+|+.++|.|.+ +.|.|.+.|++++..+ ... ..++.+..+++|.|.+++.+|+|.|+|.|.|.
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 419 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVSNS 419 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEECS
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEEcC
Confidence 5667777888899999999999999 5799999999955433 322 23677777889999999999999999999999
Q ss_pred CceeeEEEEEEEeccCCC
Q psy10160 206 YTSDENAVTIRVEGIFIH 223 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~ 223 (558)
.|..+.++.+.|.+.+.+
T Consensus 420 ~G~~~~~~~~~v~~~~~~ 437 (440)
T 3zyj_A 420 VGNTTASATLNVTGTHHH 437 (440)
T ss_dssp SCEEEEEEEEEEC-----
T ss_pred CCcEEEEEEEEEeccccc
Confidence 999999999999876543
No 385
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.17 E-value=3.8e-11 Score=106.29 Aligned_cols=147 Identities=15% Similarity=0.163 Sum_probs=94.0
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC-CCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP-IPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.|.+...+....+.+|+.+.|.|.+.+.| .+.+.|+|++..+... ...+.|.+++.+|+|.|+|.+.|..+
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~--------~~~~~~~~~~~~d~G~Y~C~~~~~~~ 75 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTH--------TQPSYRFKANNNDSGEYTCQTGQTSL 75 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTC--------CSSEEEEECCGGGCEEEEEEETTSBC
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccC--------ccceEEEecccccCeEEEEEEeCCCc
Confidence 45566677777889999999999999987 6789999999988653 34577889999999999999998654
Q ss_pred eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhhhcc
Q psy10160 208 SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKKRRS 287 (558)
Q Consensus 208 ~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~~~g 287 (558)
. ..+.|.|..++ .....+ . ..+..|......|... .+.|.+.+.|++++....... ..+
T Consensus 76 s--~~~~l~v~~~~---~~~~~~----~------~~~~~g~~~~l~C~~~--~~~p~~~~~W~~~g~~~~~~~----~~~ 134 (170)
T 3ry4_A 76 S--DPVHLTVLFEW---LVLQTP----H------LEFQEGETIMLRCHSW--KDKPLVKVTFFQNGKSQKFSH----LDP 134 (170)
T ss_dssp C--CCEEEEEECCS---EEEECS----C------SEECTTCCEEEEEEEG--GGCCEEEEEEEETTEEEEEES----SCC
T ss_pred e--EeEEEEEECCc---eEecCC----C------ceeecCCeEEEEEECC--CCCCCceEEEEECCeEccccC----CCC
Confidence 4 45666775432 111111 0 1122333344444432 356779999999865432111 122
Q ss_pred cccchhhhhhhHHHhhc
Q psy10160 288 RRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 288 rth~q~a~~~t~g~~~~ 304 (558)
...+..+.....|.|..
T Consensus 135 ~L~i~~v~~~d~G~Y~C 151 (170)
T 3ry4_A 135 TFSIPQANHSHSGDYHC 151 (170)
T ss_dssp EEEESSCCGGGCEEEEE
T ss_pred eEEEEeccccCCEEEEE
Confidence 33444455555555544
No 386
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.17 E-value=1.1e-10 Score=95.04 Aligned_cols=86 Identities=19% Similarity=0.111 Sum_probs=66.4
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEe------------------ccCCceEEEccCCeEEEccCCCCCC
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVI------------------ENDGVHYRITESNRLHINQANATDS 195 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l------------------~~~~~~~~~~~~~sL~I~~v~~~D~ 195 (558)
+.+.+..+.+|+++.|.|.....+.+.+.|+|..... +...+|..+..+++|.|.+|+.+|+
T Consensus 5 i~~~p~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~ 84 (111)
T 2qsq_A 5 IESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDA 84 (111)
T ss_dssp EEEESSEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGC
T ss_pred EEeccceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCC
Confidence 3444457889999999998644445579999975321 1123578888899999999999999
Q ss_pred eEEEEEEEeCCce-eeEEEEEEEec
Q psy10160 196 GEYRCVASNSYTS-DENAVTIRVEG 219 (558)
Q Consensus 196 G~Y~C~a~N~~G~-~~~~~~l~V~~ 219 (558)
|.|+|.+.|..+. .+..+.|.|..
T Consensus 85 G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 85 GFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp EEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred eEEEEEEEeCCCcEEEEEEEEEEec
Confidence 9999999999774 57888888864
No 387
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.16 E-value=1.3e-10 Score=110.27 Aligned_cols=73 Identities=14% Similarity=0.307 Sum_probs=50.3
Q ss_pred CceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCCceEE------E--ccCC------eEEEccCCCC-CCeEEE
Q psy10160 137 ETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDGVHYR------I--TESN------RLHINQANAT-DSGEYR 199 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~~~~------~--~~~~------sL~I~~v~~~-D~G~Y~ 199 (558)
....+.+|+.+.|.|.+.|. |.| .+.|+|+|..+.... ... + ..++ .|.|.....+ |.|.|+
T Consensus 131 ~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~-~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~yt 209 (252)
T 1oga_E 131 SEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV-STDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFR 209 (252)
T ss_dssp CHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSE-EECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEE
T ss_pred ChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCc-ccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEE
Confidence 33345579999999999986 654 899999998876432 110 0 1222 3777766554 678999
Q ss_pred EEEEeCCceee
Q psy10160 200 CVASNSYTSDE 210 (558)
Q Consensus 200 C~a~N~~G~~~ 210 (558)
|.+.|......
T Consensus 210 C~v~~~~l~~~ 220 (252)
T 1oga_E 210 CQVQFYGLSEN 220 (252)
T ss_dssp EEEEECCBCTT
T ss_pred EEEEcCCCCCC
Confidence 99999865543
No 388
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.16 E-value=1.1e-10 Score=110.83 Aligned_cols=65 Identities=18% Similarity=0.432 Sum_probs=48.0
Q ss_pred EeeCCCcEEEEeEeec-cCCC-eEEEEECCEEeccCC---------------ceEEEccCCeEEEccCCCCC-CeEEEEE
Q psy10160 140 VFGVGSDISIPCDVDG-YPIP-QVFWYKDGQVIENDG---------------VHYRITESNRLHINQANATD-SGEYRCV 201 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g-~P~p-~i~W~~~g~~l~~~~---------------~~~~~~~~~sL~I~~v~~~D-~G~Y~C~ 201 (558)
.+..|+.++|.|.+.| +|.| .+.|+|+|..+.... ..|.+ ...|.|.....+| .|.|+|.
T Consensus 135 ~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~--~s~l~i~~~~~~d~~~~ytC~ 212 (253)
T 3to4_D 135 EISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYAL--SSRLRVSATFWQNPRNHFRCQ 212 (253)
T ss_dssp HHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEE--EEEEEEEHHHHTCTTCEEEEE
T ss_pred hcccCCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEE--EEEEEECHHHhccCCCEEEEE
Confidence 3445789999999999 6767 799999999886421 11211 1257788777777 7799999
Q ss_pred EEeCC
Q psy10160 202 ASNSY 206 (558)
Q Consensus 202 a~N~~ 206 (558)
|.|..
T Consensus 213 v~h~~ 217 (253)
T 3to4_D 213 VQFYG 217 (253)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 99964
No 389
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.15 E-value=3.8e-11 Score=110.81 Aligned_cols=156 Identities=12% Similarity=-0.029 Sum_probs=91.7
Q ss_pred CCceEeeCC--CcEEEEeEeeccCCCeEEEEEC---CEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee
Q psy10160 136 LETQVFGVG--SDISIPCDVDGYPIPQVFWYKD---GQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE 210 (558)
Q Consensus 136 ~~~~~v~~G--~~v~L~C~~~g~P~p~i~W~~~---g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~ 210 (558)
+....+.+| +.+.|.|.+.+ |.|.+.|+++ +..+.. +.++....++.|.|.+++.+|+|.|+|.|.|..+...
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~-~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPD-GNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCC-SSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccC-CCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 456778899 99999999987 7899999884 555544 3455555667899999999999999999999544432
Q ss_pred -EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC--CCcccccchhhhhhhh-----hhh
Q psy10160 211 -NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL--PSYGPHIKRAVEAEAA-----AAD 282 (558)
Q Consensus 211 -~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~--~~~~~w~~~~l~~~~~-----~~~ 282 (558)
..+.|.|... .+|.... .....+ .+..|.... ..|.+.|.| ++.+.|++++...... ..+
T Consensus 92 s~~~~l~v~~~-~~p~~~~---~~~~~~-----~v~~G~~v~---L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~ 159 (213)
T 2x1w_L 92 SIMYIVVVVGY-RIYDVVL---SPSHGI-----ELSVGEKLV---LNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLK 159 (213)
T ss_dssp CCCEEEEECBC-CEEEEEE---ESCSCE-----EEETTCCEE---EEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEEC
T ss_pred EEEEEEEEeCC-cccceEE---cCCCCe-----EEcCCCCEE---EEEEEECCCCCceEEEEEecCCccceEEEeccccc
Confidence 2367777431 1111110 011110 123333344 455555544 4568999887652211 000
Q ss_pred -------hhhcccccchhhhhhhHHHhhcc
Q psy10160 283 -------KKRRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 283 -------~~~~grth~q~a~~~t~g~~~~~ 305 (558)
....+..++..++....|.|...
T Consensus 160 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 189 (213)
T 2x1w_L 160 TQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 189 (213)
T ss_dssp CCSSCSCEEEEEEEEESSCCGGGCEEEEEE
T ss_pred cccCccceeeeEEEEECCCCcccCEEEEEE
Confidence 11122355566667767766653
No 390
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.15 E-value=8.6e-11 Score=110.50 Aligned_cols=71 Identities=11% Similarity=0.270 Sum_probs=47.0
Q ss_pred CceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCCc---eEEEccCCe------EEEccCCCCC-CeEEEEEEEe
Q psy10160 137 ETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDGV---HYRITESNR------LHINQANATD-SGEYRCVASN 204 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~~---~~~~~~~~s------L~I~~v~~~D-~G~Y~C~a~N 204 (558)
....+.+|+.+.|.|.+.|. |.| .+.|+|+|..+..... ......+++ |.|.....+| .|.|+|.|.|
T Consensus 129 ~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~ 208 (238)
T 1bec_A 129 SKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQF 208 (238)
T ss_dssp CSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEE
T ss_pred ChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEc
Confidence 33445689999999999996 655 8999999998865321 111123343 3343333334 6789999999
Q ss_pred CCc
Q psy10160 205 SYT 207 (558)
Q Consensus 205 ~~G 207 (558)
...
T Consensus 209 ~~l 211 (238)
T 1bec_A 209 HGL 211 (238)
T ss_dssp CCC
T ss_pred CCC
Confidence 743
No 391
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.15 E-value=1.2e-10 Score=104.29 Aligned_cols=118 Identities=14% Similarity=0.132 Sum_probs=82.6
Q ss_pred CceEeeCCCcEEEEeEeec-cCCCeEEEEEC-CEEec-----------cCC--ceEEE-ccCCeEEEccCCCCCCeEEEE
Q psy10160 137 ETQVFGVGSDISIPCDVDG-YPIPQVFWYKD-GQVIE-----------NDG--VHYRI-TESNRLHINQANATDSGEYRC 200 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~-g~~l~-----------~~~--~~~~~-~~~~sL~I~~v~~~D~G~Y~C 200 (558)
....+.+|+.++|.|.+.+ .+.+.|.|+|. +..+. ... .|+.+ ..+++|.|.+++.+|+|.|+|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEEEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeEEEE
Confidence 4567889999999999855 34788999994 32221 011 36666 567899999999999999999
Q ss_pred EEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccccchhhhh
Q psy10160 201 VASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 201 ~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w~~~~l~~ 276 (558)
.+.+.. .....+.|.|.+++..|.+. ..+ .. +...|.+ .| |+|.+.|++++...
T Consensus 87 ~v~~~~-~~~~~~~L~V~~~~~~P~i~-----------~~~------~~---v~L~C~~~~g-p~p~i~W~~~~~~l 141 (180)
T 2dru_A 87 RMLHET-EDQWKITMEVYEMVSKPMIY-----------WEC------SN---ATLTCEVLEG-TDVELKLYQGKEHL 141 (180)
T ss_dssp EEESSS-EEEEEEEEEEECCCCCCEEE-----------EEG------GG---TEEEEECSSC-TTCEEEEEETTEEE
T ss_pred EEEcCC-eEEEEEEEEEECCCCCCEEE-----------ecC------CC---EEEEEEeCCC-CCCEEEEEECCeEC
Confidence 998877 66788889997654222211 111 11 3355666 46 89999999987543
No 392
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.14 E-value=1e-10 Score=109.94 Aligned_cols=130 Identities=18% Similarity=0.255 Sum_probs=82.8
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccC----CCeEEEEECC--EE---ec--------cCCceEEEccC---CeEEEccCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYP----IPQVFWYKDG--QV---IE--------NDGVHYRITES---NRLHINQAN 191 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P----~p~i~W~~~g--~~---l~--------~~~~~~~~~~~---~sL~I~~v~ 191 (558)
+...+....+.+|+.++|.|.+.+.| .|.+.|+|+. .. +. ....++.+... .+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 44556778899999999999999998 7889999852 21 11 01235544332 279999999
Q ss_pred CCCCeEEEEEEEeCCce-eeEEEEEEEeccCC--CCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC--CCc
Q psy10160 192 ATDSGEYRCVASNSYTS-DENAVTIRVEGIFI--HPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL--PSY 266 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~-~~~~~~l~V~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~--~~~ 266 (558)
.+|+|.|.|.+.|..+. ....+.|.|..++. +|... ... .. ...+..|.... ..|.+.+.| .+.
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~-~~~-~~------~~~v~~G~~v~---L~C~~~g~p~~~~~ 152 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQ-LQQ-SG------AELVEPGASVK---LSCTASGFNIKDTY 152 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCE-EEE-CC------CEEECTTCCEE---EEEEEESSCGGGSC
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEE-EeC-CC------ceEEeCCCcEE---EEEEEcCccCCCCE
Confidence 99999999999998765 34556777765432 11111 000 11 11123333344 455555665 468
Q ss_pred ccccch
Q psy10160 267 GPHIKR 272 (558)
Q Consensus 267 ~~w~~~ 272 (558)
+.|+++
T Consensus 153 v~W~k~ 158 (240)
T 1moe_A 153 MHWVKQ 158 (240)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999996
No 393
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.14 E-value=4.2e-11 Score=113.11 Aligned_cols=135 Identities=19% Similarity=0.215 Sum_probs=84.4
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE----------------CCEEeccC--CceEEEcc----CCeEEEcc
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK----------------DGQVIEND--GVHYRITE----SNRLHINQ 189 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~----------------~g~~l~~~--~~~~~~~~----~~sL~I~~ 189 (558)
+...+....+.+|+.+.|.|.+.+.|.+.+.|+| ++...... ..++.+.. +.+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4455667888999999999999999999999998 32222221 13555432 23799999
Q ss_pred CCCCCCeEEEEEEEeCCc----eeeEEEEEEEec---cCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC
Q psy10160 190 ANATDSGEYRCVASNSYT----SDENAVTIRVEG---IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ 262 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G----~~~~~~~l~V~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~ 262 (558)
++.+|+|.|.|.+.|..+ .......|.|.. ...+|.+. +..+.......+......|.+.|.
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~-----------~~~~~~~~~~~g~~v~L~C~~~g~ 152 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVA-----------VFEPSEAEISHTQKATLVCLATGF 152 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEE-----------EECCCHHHHHHHSEEEEEEEEEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceE-----------eecCCchhccCCCcEEEEEEEccC
Confidence 999999999999998754 223445677764 11222211 111100000012333455556576
Q ss_pred CCC--cccccchhhhhh
Q psy10160 263 LPS--YGPHIKRAVEAE 277 (558)
Q Consensus 263 ~~~--~~~w~~~~l~~~ 277 (558)
+++ .+.|++++..+.
T Consensus 153 ~p~~~~v~W~k~g~~l~ 169 (246)
T 4dzb_B 153 YPDHVELSWWVNGKEVH 169 (246)
T ss_dssp BSSCEEEEEEETTEEEC
T ss_pred cCCceEEEEEECCEECC
Confidence 665 799999875543
No 394
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.13 E-value=1.9e-10 Score=109.54 Aligned_cols=133 Identities=16% Similarity=0.178 Sum_probs=79.8
Q ss_pred CceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEE---ec------------cCCceEEEcc-----CCeEEEccCCC
Q psy10160 137 ETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQV---IE------------NDGVHYRITE-----SNRLHINQANA 192 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~---l~------------~~~~~~~~~~-----~~sL~I~~v~~ 192 (558)
....+.+|+.++|.|.+.|.| .|.+.|+|+ +.. +. ....|+.+.. ..+|.|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 445788999999999999986 688999985 211 10 0123555543 23899999999
Q ss_pred CCCeEEEEEEEeCCc-------ee--eEEEEEEEeccCCCCCCCCCCcc-ccceeEEec--eeeecccceeEEEEeccCC
Q psy10160 193 TDSGEYRCVASNSYT-------SD--ENAVTIRVEGIFIHPSCRDLPLF-ANCKLIVEG--RYCQHHYYSQFCCESCTRA 260 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G-------~~--~~~~~l~V~~~~~~p~~~~~~~~-~~~~~~~~~--~~~~~g~~~~~~c~~~~~~ 260 (558)
+|+|.|.|.|.|..| .. ...+.|.|...+..+.....+.. ....+.... ..+.. +....+.|.+.
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~---G~~v~L~C~~~ 164 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASV---GDRVTLSCKGS 164 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCT---TCCEEEEEECS
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcC---CCCEEEEEEEC
Confidence 999999999999865 11 23457777654311000000000 000000000 01222 34444666677
Q ss_pred CCCCCcccccch
Q psy10160 261 GQLPSYGPHIKR 272 (558)
Q Consensus 261 g~~~~~~~w~~~ 272 (558)
+.+++.+.|+++
T Consensus 165 ~~~~~~v~W~k~ 176 (257)
T 1f3r_B 165 QNINNYLAWYQQ 176 (257)
T ss_dssp SCCBTCEEEEEE
T ss_pred CcCCCcEEEEEE
Confidence 888899999994
No 395
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.13 E-value=1.3e-10 Score=109.13 Aligned_cols=178 Identities=14% Similarity=0.162 Sum_probs=89.8
Q ss_pred EEEEEEEEeCCcceEEEEEEEEeCCCCccCCCCc---cc-cCceeEEeccCCCC----CCcEEEEeCCcccCCCCce---
Q psy10160 27 GAYTCQAYNGLGRAVSWTVTLQALPSEKVADPNA---ID-YGTILSSAFPSESA----SPVVTQTTTTTTEATSPHV--- 95 (558)
Q Consensus 27 G~Y~C~a~n~~g~~~s~~l~V~~~p~~~~~~~~~---v~-~~~~~~~~~~~~~p----~p~v~W~~~~~~~~~~~~~--- 95 (558)
|.|.|...|..+. .... .+...|...+.+|.. +. ++.+.+.|.+.+.+ ...|+|++++..+......
T Consensus 1 ~~~~~~~~~~~~~-c~~~-~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~ 78 (240)
T 4acp_A 1 GTKSCDKTHTCPP-CPAP-ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE 78 (240)
T ss_dssp ------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCE
T ss_pred CceeeeeeecCCC-CCcc-ccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccce
Confidence 7899999987663 2111 112234444444433 22 45778899988864 2369999998776432110
Q ss_pred --eecccc---cee---------eceeEEeecccee--eEEeee--ceeeeCcEEEecCCceEeeCCCcEEEEeEeec-c
Q psy10160 96 --YAALTH---CVP---------WSNVCLFGARSGY--LKETQN--GGYLVPVKVNITLETQVFGVGSDISIPCDVDG-Y 156 (558)
Q Consensus 96 --~~g~~~---~~~---------~~~~~~~~~~~~~--~~~~~~--~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g-~ 156 (558)
..+.|. .+. -.+.|.+.+.... ...... .....+|.+.+.+.......|+.+.|.|.+.| +
T Consensus 79 ~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~ 158 (240)
T 4acp_A 79 EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFY 158 (240)
T ss_dssp EC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEB
T ss_pred ECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEe
Confidence 011111 111 1357777766542 221211 12345677766555443445999999999999 5
Q ss_pred CCC-eEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCeEEEEEEEeCC
Q psy10160 157 PIP-QVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 157 P~p-~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
|.+ .+.|+|+|..+.... .......++ .|.|.....+|.|.|+|.+.|..
T Consensus 159 P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 159 PSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp SSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 654 699999998864211 011112233 46666555568899999999975
No 396
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.13 E-value=7.5e-11 Score=111.52 Aligned_cols=125 Identities=15% Similarity=0.229 Sum_probs=82.1
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCe-----EEEEECCEEecc----------------CCceEE----EccCCeEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQ-----VFWYKDGQVIEN----------------DGVHYR----ITESNRLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~-----i~W~~~g~~l~~----------------~~~~~~----~~~~~sL~I~~ 189 (558)
.+....+.+|+.+.|.|.+.|.|.|. +.|+|++..... ...++. ...+.+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 44566788999999999999999886 999996422110 000000 01123699999
Q ss_pred CCCCCCeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCC-cc
Q psy10160 190 ANATDSGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPS-YG 267 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~-~~ 267 (558)
++.+|+|.|+|.+.|..|.....+.|.|..+| .+...+ . .... .+.... ..|.+.| .|+| .+
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P---~v~~~~---~-~~~~------~~~~~~---L~C~~~g~~P~pi~v 152 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP---ASRLLL---D-QVGM------KENEDK---YMCESSGFYPEAINI 152 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC---EEEEEC---C---------------CE---EEEEEEEEBSSCCEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCC---ceEEec---C-Cccc------cCCCcE---EEEEEccEECCCeEE
Confidence 99999999999999999988888999997533 221111 1 0111 111233 4555557 7888 89
Q ss_pred cccchhhh
Q psy10160 268 PHIKRAVE 275 (558)
Q Consensus 268 ~w~~~~l~ 275 (558)
.|++++..
T Consensus 153 ~W~k~g~~ 160 (248)
T 3pv7_A 153 TWEKQTQK 160 (248)
T ss_dssp EEEEECSS
T ss_pred EEEECCcc
Confidence 99999753
No 397
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.13 E-value=1.1e-10 Score=112.94 Aligned_cols=145 Identities=12% Similarity=0.023 Sum_probs=83.7
Q ss_pred eEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceee-EEEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDE-NAVTIRV 217 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V 217 (558)
..+.+|+.+.|.|.+. .|.|.+.|++.+....... .+ .....+. ..+|+|.|+|.|.|..+... ..+.|.|
T Consensus 105 ~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~-~~--~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v 176 (289)
T 3mjg_X 105 IFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPV-PY--DHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYR 176 (289)
T ss_dssp EEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCC-CE--ETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEE
T ss_pred EEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccce-ee--cCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEe
Confidence 5688999999999999 7889999998753222211 11 1111222 36799999999998877663 4466777
Q ss_pred eccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhh---hh------hhhccc
Q psy10160 218 EGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAA---AD------KKRRSR 288 (558)
Q Consensus 218 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~---~~------~~~~gr 288 (558)
... .+|.+...+ .... +..|.... ..|.+.|.|.|.+.|++++....... .. ....+.
T Consensus 177 ~~~-~~p~i~~~~---~~~~------v~~G~~v~---L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (289)
T 3mjg_X 177 LQV-SSINVSVNA---VQTV------VRQGENIT---LMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSI 243 (289)
T ss_dssp CCC-CCCCCEEEE---SCSE------EETTSCEE---EEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEE
T ss_pred cCC-CCCCcEEeC---Ccce------eEcCCCEE---EEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEE
Confidence 543 222222111 1111 22333344 45556689999999997654322111 00 112244
Q ss_pred ccchhhhhhhHHHhhc
Q psy10160 289 RSLSVVNKWSLRQAFT 304 (558)
Q Consensus 289 th~q~a~~~t~g~~~~ 304 (558)
.++..+.....|.|..
T Consensus 244 L~I~~v~~~D~G~Y~C 259 (289)
T 3mjg_X 244 LHIPSAELEDSGTYTC 259 (289)
T ss_dssp EEESSCCSSCCEEEEE
T ss_pred EEEcccChhhCcEEEE
Confidence 5556666666666554
No 398
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.13 E-value=2.3e-10 Score=105.94 Aligned_cols=129 Identities=17% Similarity=0.263 Sum_probs=82.9
Q ss_pred cCCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEec----------------cCCceEEEcc-----CCeEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIE----------------NDGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~----------------~~~~~~~~~~-----~~sL~I~~ 189 (558)
.+....+.+|+.+.|.|.+.|.| .|.+.|+|+ +..+. ....|+.+.. +.+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 34566789999999999999876 678999986 33221 0123555432 24899999
Q ss_pred CCCCCCeEEEEEEEeCCce----eeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CC
Q psy10160 190 ANATDSGEYRCVASNSYTS----DENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QL 263 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~----~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~ 263 (558)
++.+|+|.|.|.+.|..+. ....+.|.|.... .+|.+...+ . ...+.. +......|.+.| .|
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~--~-------~~~~~~---g~~v~L~C~~~g~~P 153 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLA--P-------GSAAQT---NSMVTLGCLVKGYFP 153 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEEC--C-------CSSSCC---SSEEEEEEEEEEEBS
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEec--C-------cccccc---CCeEEEEEEcccccC
Confidence 9999999999999998742 2235677775421 122211100 0 001112 334445666667 78
Q ss_pred CC-cccccchhhh
Q psy10160 264 PS-YGPHIKRAVE 275 (558)
Q Consensus 264 ~~-~~~w~~~~l~ 275 (558)
.| .+.|++++..
T Consensus 154 ~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 154 EPVTVTWNSGSLS 166 (219)
T ss_dssp SCCEEEEGGGTBC
T ss_pred CCeEEEEEeCCcc
Confidence 88 9999999754
No 399
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.12 E-value=1.8e-10 Score=108.88 Aligned_cols=133 Identities=15% Similarity=0.192 Sum_probs=78.7
Q ss_pred CceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEe----------------ccCCceEEEcc-----CCeEEEccCC
Q psy10160 137 ETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVI----------------ENDGVHYRITE-----SNRLHINQAN 191 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l----------------~~~~~~~~~~~-----~~sL~I~~v~ 191 (558)
....+.+|+.++|.|.+.|.| .|.+.|+|+. ..+ .....++.+.. ..+|.|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 457789999999999999987 6789999842 111 01123555443 2379999999
Q ss_pred CCCCeEEEEEEEeCCcee--eEEEEEEEeccCCCCCCCCC-CccccceeEEe--ceeeecccceeEEEEeccCCCCCCCc
Q psy10160 192 ATDSGEYRCVASNSYTSD--ENAVTIRVEGIFIHPSCRDL-PLFANCKLIVE--GRYCQHHYYSQFCCESCTRAGQLPSY 266 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~~--~~~~~l~V~~~~~~p~~~~~-~~~~~~~~~~~--~~~~~~g~~~~~~c~~~~~~g~~~~~ 266 (558)
.+|+|.|.|.+.|..+.. ...+.|.|..++........ .......+... ...+..|.... ..|.+.+.+++.
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~---L~C~~~~~~~~~ 166 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERAT---LSCRASQSVRSN 166 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEE---EEEEESSCCTTC
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEE---EEEEeCCCccce
Confidence 999999999999984332 33457777644210000000 00000001110 01123333344 555666888899
Q ss_pred ccccch
Q psy10160 267 GPHIKR 272 (558)
Q Consensus 267 ~~w~~~ 272 (558)
+.|+++
T Consensus 167 v~W~k~ 172 (247)
T 2ghw_B 167 LAWYQQ 172 (247)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999993
No 400
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.12 E-value=5.3e-11 Score=127.54 Aligned_cols=127 Identities=17% Similarity=0.192 Sum_probs=90.9
Q ss_pred ceEeeCCCcEEEEeEe-eccCCCeEEEEECCEEeccC-----------CceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 138 TQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQVIEND-----------GVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~~l~~~-----------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
...+.+|+.++|.|.+ .+.|.|.+.|+|++..+... ..++.+..+++|.|.+++.+|+|.|+|.+.|.
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~ 454 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQAMNR 454 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEEECT
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEEEcC
Confidence 4567899999999999 88999999999986532110 22555667789999999999999999999999
Q ss_pred Ccee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCCcccccchhhhhh
Q psy10160 206 YTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPSYGPHIKRAVEAE 277 (558)
Q Consensus 206 ~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~~~~w~~~~l~~~ 277 (558)
.|.. ...+.|.|..++..|.+..... ....+ .......|.+.+ .|+|.+.|++++..+.
T Consensus 455 ~~~~~~~~~~l~V~~~~~~p~i~~~~~-----~~~~~--------~~~~~l~C~~~~~~P~~~i~W~~~g~~l~ 515 (581)
T 3o3u_N 455 NGKETKSNYRVRVYQIPGKPEIVDSAS-----ELTAG--------VPNKVGTCVSEGSYPAGTLSWHLDGKPLV 515 (581)
T ss_dssp TSCEEEEEEEEEEEBCCCCCEEESCCS-----EECTT--------SCEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred CCceeEEEEEEEEEcCCCCCEEEcCCc-----ccccC--------CceeEEEEECCCCCCCCeEEEEECCEECC
Confidence 9988 7889999977654443322111 11111 112223455556 5899999999976554
No 401
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.12 E-value=1.4e-10 Score=108.43 Aligned_cols=74 Identities=15% Similarity=0.316 Sum_probs=52.4
Q ss_pred EeeCCCcEEEEeEeecc-C-CCeEEEEECCEEeccC----------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 140 VFGVGSDISIPCDVDGY-P-IPQVFWYKDGQVIEND----------GVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P-~p~i~W~~~g~~l~~~----------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.+.+|+.+.|.|.+.+. | .+.+.| ++..+... +..|.. .+.|.|.....+| |.|+|.+.|..+
T Consensus 139 ~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-~~ytC~v~h~~~ 213 (230)
T 3n9g_H 139 KSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPS 213 (230)
T ss_dssp CCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE--EEEEEEESTTBTT-BCCEEEEEEGGG
T ss_pred cccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEE--EEEEEECHHHcCC-CeEEEEEEECCC
Confidence 34689999999999985 4 345899 55444221 112221 1368999999999 999999999988
Q ss_pred eeeEEEEEEEe
Q psy10160 208 SDENAVTIRVE 218 (558)
Q Consensus 208 ~~~~~~~l~V~ 218 (558)
.......+.|.
T Consensus 214 ~~~~~~~~~v~ 224 (230)
T 3n9g_H 214 NTKVDKRVEPK 224 (230)
T ss_dssp TEEEEEECCCC
T ss_pred CcceEEEccCC
Confidence 77776666664
No 402
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.12 E-value=1.1e-10 Score=110.43 Aligned_cols=85 Identities=14% Similarity=0.204 Sum_probs=53.0
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeecc-C-CCeEEEEECCEEecc--------CCceEEEccCCeEEEccCCCCCCeEEE
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGY-P-IPQVFWYKDGQVIEN--------DGVHYRITESNRLHINQANATDSGEYR 199 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~-P-~p~i~W~~~g~~l~~--------~~~~~~~~~~~sL~I~~v~~~D~G~Y~ 199 (558)
|.+...+....+..|+.+.|.|.+.|. | .+.+.|++++..+.. .+..|.+ .+.|.|.....+| |.|+
T Consensus 142 P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-~~yt 218 (248)
T 3u2s_H 142 PSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYI 218 (248)
T ss_dssp CEEEEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE--EEEEEEEGGGBTT-BCCE
T ss_pred CEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEE--EEEEEEChhhcCC-CeEE
Confidence 334333333345579999999999984 4 346899998864321 1122222 1368888888888 9999
Q ss_pred EEEEeCCceeeEEEEEEE
Q psy10160 200 CVASNSYTSDENAVTIRV 217 (558)
Q Consensus 200 C~a~N~~G~~~~~~~l~V 217 (558)
|.+.|..+.......+.+
T Consensus 219 C~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 219 CNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEGGGTEEEEEECCC
T ss_pred EEEEECCCCcceEEEEcc
Confidence 999999877765555544
No 403
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.11 E-value=8.8e-11 Score=111.43 Aligned_cols=136 Identities=16% Similarity=0.145 Sum_probs=84.8
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccC-----CCeEEEEECC--EEe-----------ccCCceEEEccC---CeEEEc
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYP-----IPQVFWYKDG--QVI-----------ENDGVHYRITES---NRLHIN 188 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P-----~p~i~W~~~g--~~l-----------~~~~~~~~~~~~---~sL~I~ 188 (558)
+.+...+....+.+|+.++|.|.+.+.| .|.+.|+|++ ..+ .....++.+... .+|.|.
T Consensus 35 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 35 VLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred cEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 3445556778899999999999999988 6899999854 111 011235544432 289999
Q ss_pred cCCCCCCeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC-
Q psy10160 189 QANATDSGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS- 265 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~- 265 (558)
+++.+|+|.|.|.+.|..+.. .....|.|.....+|.+...+. ... ... +......|.+.|. |++
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~--~~~-------~~~---g~~v~L~C~~~g~~p~~~ 182 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPP--SSE-------QLT---SGGASVVCFLNNFYPKDI 182 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECC--CHH-------HHH---HTEEEEEEEEEEEBSSCC
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCC--Chh-------hcC---CCcEEEEEEEeeEeCCCc
Confidence 999999999999999986643 2335677754333333221110 000 011 2233455555564 443
Q ss_pred cccccchhhhhh
Q psy10160 266 YGPHIKRAVEAE 277 (558)
Q Consensus 266 ~~~w~~~~l~~~ 277 (558)
.+.|++++....
T Consensus 183 ~v~W~k~g~~~~ 194 (252)
T 3bkj_L 183 NVKWKIDGSERQ 194 (252)
T ss_dssp EEEEEETTEEEC
T ss_pred EEEEEECCeecC
Confidence 689999976543
No 404
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=6.6e-11 Score=111.51 Aligned_cols=162 Identities=12% Similarity=0.052 Sum_probs=101.1
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCce-EEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVH-YRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
.+|.+...+.. .+.+|+.++|.|.+.+ +.+.+.|+|++..+...... .....+++|.|.+++.+|+|.|+|.+.|..
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 83 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 83 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCC
Confidence 35667777766 7899999999999976 45689999999876421100 001234579999999999999999999976
Q ss_pred cee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhhhhhhhhhh
Q psy10160 207 TSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEAEAAAADKK 284 (558)
Q Consensus 207 G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~~~~~~~~~ 284 (558)
+.. +..+.|.|.+....|.+...+ ...+..|.... ..|.+.+ .++.+.|++++...........
T Consensus 84 ~~s~~S~~~~L~V~~~~~~P~i~~~p----------~~~v~~G~~vt---L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~ 149 (242)
T 1p6f_A 84 LWSEPSNLLDLVVTEMYDTPTLSVHP----------GPEVISGEKVT---FYCRLDT-ATSMFLLLKEGRSSHVQRGYGK 149 (242)
T ss_dssp EECCCCCCEEEEEECCSCCCEEEEES----------CSEEETTCEEE---EEEECTT-SCSEEEEEECSSSCEEEEEECS
T ss_pred ccccCCcceEEEeecccCCCceEccC----------CCccCCCCcEE---EEEecCC-CCCEEEEEECCCccCccccCCC
Confidence 533 566788887544333322111 11223333344 4454533 3568899998754332111112
Q ss_pred hcccccchhhhhhhHHHhhcc
Q psy10160 285 RRSRRSLSVVNKWSLRQAFTT 305 (558)
Q Consensus 285 ~~grth~q~a~~~t~g~~~~~ 305 (558)
..+..++..+.+.+.|.|.+.
T Consensus 150 ~~~~l~I~~v~~~d~G~Y~C~ 170 (242)
T 1p6f_A 150 VQAEFPLGPVTTAHRGTYRCF 170 (242)
T ss_dssp SEEEEEEEECCGGGCEEEEEE
T ss_pred ceEEEEeCCCccccCEEEEEE
Confidence 234456666777777777664
No 405
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.10 E-value=4.2e-10 Score=92.95 Aligned_cols=88 Identities=16% Similarity=0.222 Sum_probs=66.7
Q ss_pred CCceEeeCCCcEEEEeEeec--cCCCeEEEEECCEEecc------------CCceEEEccCCeEEEccCCCCCCeEEEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDG--YPIPQVFWYKDGQVIEN------------DGVHYRITESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g--~P~p~i~W~~~g~~l~~------------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
+....+.+|+.++|.|...+ .+.+.+.|+|++..+.. -..|+.+..+.+|.|.+++.+|+|.|+|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C~ 89 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFCI 89 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEEE
T ss_pred cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEEE
Confidence 45677889999999999987 33456999998654321 02356665677999999999999999999
Q ss_pred EE-eCCceeeEEEEEEEeccCCC
Q psy10160 202 AS-NSYTSDENAVTIRVEGIFIH 223 (558)
Q Consensus 202 a~-N~~G~~~~~~~l~V~~~~~~ 223 (558)
+. +..|.....+.|.|..|+.+
T Consensus 90 v~~~~~g~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 90 YHTYPDGTYTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEETTCCEEEEEEEEEECC---
T ss_pred EEECCCCCeEEEEEEEEEccCcc
Confidence 75 46788889999999877643
No 406
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.10 E-value=3.8e-10 Score=119.75 Aligned_cols=89 Identities=27% Similarity=0.388 Sum_probs=78.7
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccC---CeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITES---NRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++.++..+. ++.+... .+|.|.++.++|+|.|+|+|.|
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~-~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N 559 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSV-KYMKRYNGNDYGLTINRVKGDDKGEYTVRAKN 559 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSS-SEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCC-cEEEEEcCCEEEEEEcCCCcccCcEEEEEEEe
Confidence 45777778888899999999999999999999999999999998654 5555432 2799999999999999999999
Q ss_pred CCceeeEEEEEEE
Q psy10160 205 SYTSDENAVTIRV 217 (558)
Q Consensus 205 ~~G~~~~~~~l~V 217 (558)
..|+.+..+.|+|
T Consensus 560 ~~G~~~~~v~l~V 572 (573)
T 3uto_A 560 SYGTKEEIVFLNV 572 (573)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9999999999988
No 407
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.10 E-value=2.6e-10 Score=104.71 Aligned_cols=156 Identities=17% Similarity=0.130 Sum_probs=91.1
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCe---EEEEECCEEeccC-----------------CceEEEc------cCCeEEEc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQ---VFWYKDGQVIEND-----------------GVHYRIT------ESNRLHIN 188 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~---i~W~~~g~~l~~~-----------------~~~~~~~------~~~sL~I~ 188 (558)
.+....+.+|+.++|.|.+.+.|.|. |.|+|++..+... ..++... .+++|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 34567789999999999999988774 8999976543211 0111111 13479999
Q ss_pred cCCCCCCeEEEEEEEeCCceee-EEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcc
Q psy10160 189 QANATDSGEYRCVASNSYTSDE-NAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYG 267 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~~-~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~ 267 (558)
+++.+|+|.|.|.+.|..+... ....+.+..++. +... ..... .... +......|.+.|.|+|.+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~-----~~~~---~~~~~~~c~~~g~p~p~i 150 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPL-PSLN-----PGPAL-----EEGQ---GLTLAASCTAEGSPAPSV 150 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCC-CEEE-----ECSCE-----ETTC---CSEEEEEEEEEEBSCCEE
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeecc-ceee-----eeeee-----eeee---ccccceeeeccCCcCceE
Confidence 9999999999999999777664 334444432221 1100 00000 0111 222334455568999999
Q ss_pred cccchhhhhhhhh-hh----hhhcccccchhhhhhhHHHhhc
Q psy10160 268 PHIKRAVEAEAAA-AD----KKRRSRRSLSVVNKWSLRQAFT 304 (558)
Q Consensus 268 ~w~~~~l~~~~~~-~~----~~~~grth~q~a~~~t~g~~~~ 304 (558)
.|++++....... .. .......++..+.....|.|-.
T Consensus 151 ~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC 192 (218)
T 4frw_A 151 TWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTC 192 (218)
T ss_dssp EEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEE
T ss_pred EEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEE
Confidence 9999875543322 11 1112234455555555555444
No 408
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.09 E-value=3.8e-11 Score=90.92 Aligned_cols=60 Identities=25% Similarity=0.494 Sum_probs=51.2
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccC-CCCCCeEEEEEEEe
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQA-NATDSGEYRCVASN 204 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v-~~~D~G~Y~C~a~N 204 (558)
+...++..|++++|+|.+.|.|. |+|+|+|..++.+ .+++|.|.++ ..+|+|.|+|.|.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~~-------~~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQK-------HDKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTTC-------CSSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcCC-------CCCEEEECccCccCcCEEEEEEEcc
Confidence 45566778999999999999983 9999999988643 4568999996 77999999999866
No 409
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.09 E-value=3.1e-10 Score=108.47 Aligned_cols=124 Identities=13% Similarity=0.155 Sum_probs=80.4
Q ss_pred cEEEecCCceEeeCCCcEEEEeEee---ccCCCeEEEEECCEEeccC-----------------CceEEEc-----cCCe
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVD---GYPIPQVFWYKDGQVIEND-----------------GVHYRIT-----ESNR 184 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~---g~P~p~i~W~~~g~~l~~~-----------------~~~~~~~-----~~~s 184 (558)
+.+...+....+.+|+.+.|.|.+. +.|.|.+.|+|++...... ..++.+. .+++
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3445566778899999999999998 7888899999965422111 1233332 2368
Q ss_pred EEEccCCCCCCeEEEEEEEeCCcee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC---
Q psy10160 185 LHINQANATDSGEYRCVASNSYTSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR--- 259 (558)
Q Consensus 185 L~I~~v~~~D~G~Y~C~a~N~~G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~--- 259 (558)
|.|.+++.+|+|.|+|.+.|..+.. ...+.|.|. +..|. ...+ .. +......|.+
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~--~~~p~---------~~~v------~~---G~~v~L~C~~~~~ 145 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL--PEEPR---------DLRV------RV---GDTTQMRCSIQST 145 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE--CCCCS---------EEEE------ET---TCCEEECCBCEES
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe--ccCCC---------cccc------cc---CCcEEEEEEecCC
Confidence 9999999999999999999986655 455566664 21111 1111 12 2333355666
Q ss_pred CCCCCCcccccchh
Q psy10160 260 AGQLPSYGPHIKRA 273 (558)
Q Consensus 260 ~g~~~~~~~w~~~~ 273 (558)
.+.|.+.+.|+++.
T Consensus 146 ~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 146 EEKRVTKVNWMFSS 159 (268)
T ss_dssp SSSCCCEEEEEEEC
T ss_pred CCCCccceEEEecC
Confidence 67899999999953
No 410
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.09 E-value=2.4e-10 Score=108.13 Aligned_cols=89 Identities=15% Similarity=0.291 Sum_probs=64.2
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC-----EEe--------ccCCceEEEccC---CeEEEccCCCCC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG-----QVI--------ENDGVHYRITES---NRLHINQANATD 194 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g-----~~l--------~~~~~~~~~~~~---~sL~I~~v~~~D 194 (558)
.+...+....+.+|+.++|.|.+.+.|.|.+.|+|.. ..+ .....++..... .+|.|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 3445566778899999999999999999999999843 111 111234444332 279999999999
Q ss_pred CeEEEEEEEeCCcee-eEEEEEEEec
Q psy10160 195 SGEYRCVASNSYTSD-ENAVTIRVEG 219 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~-~~~~~l~V~~ 219 (558)
+|.|.|.+.|..+.. .....|.|..
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEEeeCCCceECCCEEEEEEC
Confidence 999999999987654 2345677754
No 411
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.08 E-value=8.9e-11 Score=108.06 Aligned_cols=129 Identities=12% Similarity=0.121 Sum_probs=80.5
Q ss_pred CCceEeeCCCcEEEEeEeeccC---CCeEEEEECC--EEec-----------cCCceEEEccC---CeEEEccCCCCCCe
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP---IPQVFWYKDG--QVIE-----------NDGVHYRITES---NRLHINQANATDSG 196 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P---~p~i~W~~~g--~~l~-----------~~~~~~~~~~~---~sL~I~~v~~~D~G 196 (558)
|....+.+|+.+.|.|.+.|.| .|.+.|+|++ ..+. ....++..... .+|.|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6677889999999999999988 4789999853 2220 11235544332 37999999999999
Q ss_pred EEEEEEEeCCcee-eEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--cccccch
Q psy10160 197 EYRCVASNSYTSD-ENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGPHIKR 272 (558)
Q Consensus 197 ~Y~C~a~N~~G~~-~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~w~~~ 272 (558)
.|.|.+.|..+.. .....|.|.... .+|.+...+. ......| ......|.+.|.+++ .+.|+++
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---------~~~~~~g---~~v~L~C~~~g~~p~~~~v~W~k~ 154 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPP---------SSEELST---AKATLVCTITDFYPGVVTVDWKVD 154 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECC---------CHHHHTT---TEEEEEEEEEEEBSSCCEEEEEET
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCC---------CHHHccC---CcEEEEEEEEEEeCCCeEEEEEEC
Confidence 9999999987743 234566674322 2222211110 0001112 233345555565444 7999998
Q ss_pred hhhh
Q psy10160 273 AVEA 276 (558)
Q Consensus 273 ~l~~ 276 (558)
+...
T Consensus 155 g~~l 158 (212)
T 1q0x_L 155 GTPV 158 (212)
T ss_dssp TEEE
T ss_pred CEeC
Confidence 7554
No 412
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.08 E-value=1.1e-10 Score=120.84 Aligned_cols=94 Identities=15% Similarity=0.270 Sum_probs=74.0
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC-EEeccC--CceEEEccCCeEEEccCCCCCCeEEEEEEEeC
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG-QVIEND--GVHYRITESNRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g-~~l~~~--~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
+|.+...+....+.+|+.++|.|.+. |.|.|.|++++ ..+... ..++.+..+++|.|.+++.+|+|.|+|.|.|.
T Consensus 352 ~P~i~~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N~ 429 (452)
T 3zyi_A 352 APFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNV 429 (452)
T ss_dssp CCCCSBCCCCEECCTTSCCEECCBCC--TTSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEECS
T ss_pred CcccccccccccccCCCEEEEEEeCC--CCCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEcC
Confidence 45666677788899999999999998 99999999954 444322 23666777889999999999999999999999
Q ss_pred CceeeEEEEEEEeccCCCC
Q psy10160 206 YTSDENAVTIRVEGIFIHP 224 (558)
Q Consensus 206 ~G~~~~~~~l~V~~~~~~p 224 (558)
.|..+.++.|.|.+.+.++
T Consensus 430 ~G~~~~~~~l~v~~~~~~~ 448 (452)
T 3zyi_A 430 AGNSNASAYLNVSTAGTHH 448 (452)
T ss_dssp SCEEEEEEEEEC-------
T ss_pred CCcEEEEEEEEEEcccccC
Confidence 9999999999997665433
No 413
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.08 E-value=1.3e-10 Score=112.02 Aligned_cols=91 Identities=15% Similarity=0.304 Sum_probs=65.2
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCE-----Eec--------cCCceEEEccCC---eEEEccCCCC
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQ-----VIE--------NDGVHYRITESN---RLHINQANAT 193 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~-----~l~--------~~~~~~~~~~~~---sL~I~~v~~~ 193 (558)
+.+...+....+.+|+.++|.|.+.+.|.|.+.|+|++. .+. ....++.+..++ +|.|.+++.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 445556777889999999999999999999999998541 111 112355544332 7999999999
Q ss_pred CCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 194 DSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
|+|.|.|.+.|..+.. .....|.|..+
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecC
Confidence 9999999999986542 33456666543
No 414
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.07 E-value=2.4e-10 Score=108.80 Aligned_cols=75 Identities=15% Similarity=0.314 Sum_probs=48.9
Q ss_pred eEeeCCCcEEEEeEeecc-C-CCeEEEEECCEEeccC----------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCC
Q psy10160 139 QVFGVGSDISIPCDVDGY-P-IPQVFWYKDGQVIEND----------GVHYRITESNRLHINQANATDSGEYRCVASNSY 206 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~-P-~p~i~W~~~g~~l~~~----------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~ 206 (558)
..+.+|+.+.|.|.+.+. | .+.+.| ++..+... +..|.+ ..+|.|.....+| |.|+|.+.|..
T Consensus 164 ~~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~d-~~ytC~v~~~~ 238 (256)
T 3sob_H 164 SKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKP 238 (256)
T ss_dssp -----TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE--EEEEEEEGGGTTT-CCCEEEEEEGG
T ss_pred cccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEE--EEEEEECHHHcCC-ceEEEEEEeCC
Confidence 345689999999999884 5 346899 54443211 112221 1368899999999 99999999998
Q ss_pred ceeeEEEEEEEe
Q psy10160 207 TSDENAVTIRVE 218 (558)
Q Consensus 207 G~~~~~~~l~V~ 218 (558)
+.......+.+.
T Consensus 239 ~~~~~~~~~~~~ 250 (256)
T 3sob_H 239 SNTKVDKKVEPK 250 (256)
T ss_dssp GTEEEEEECCCC
T ss_pred CCcceEEEeccc
Confidence 777666555553
No 415
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.07 E-value=3.6e-10 Score=101.36 Aligned_cols=110 Identities=18% Similarity=0.325 Sum_probs=74.9
Q ss_pred eEeeCCCcEEEEeEeeccCCC--eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEE
Q psy10160 139 QVFGVGSDISIPCDVDGYPIP--QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIR 216 (558)
Q Consensus 139 ~~v~~G~~v~L~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~ 216 (558)
..+.+|+.+.|.|.+.|.|.| .+.|+|++..+..... . .....|.|. +.+|+|.|+|.+.|. ....+.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~-~--~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~ 79 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL-P--GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANIQ 79 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTC-C--CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccc-c--CCcEEEEEe--chhhCeEEEEEEECC---cCcEEEEE
Confidence 456889999999999998888 8999999998875431 1 122356665 689999999999993 33566777
Q ss_pred EeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCC-CCcccccc
Q psy10160 217 VEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQL-PSYGPHIK 271 (558)
Q Consensus 217 V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~-~~~~~w~~ 271 (558)
|..+ |.+...+ ... .+..|. .....|.+.|.| +|.+.|++
T Consensus 80 V~~~---P~~~~~~---~~~------~~~~g~---~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 80 LHGP---PRVKAVK---SSE------HINEGE---TAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp ECCS---CCCEESC---SEE------EECTTS---CEEEEEECCCSSCCCEEEEEE
T ss_pred EecC---CceeecC---CCc------EEcCCC---cEEEEEEECCCCCCCeEEEEE
Confidence 7533 3333222 111 122233 333556666888 79999999
No 416
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.07 E-value=2.4e-10 Score=107.69 Aligned_cols=90 Identities=18% Similarity=0.238 Sum_probs=64.2
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E---Eec--------cCCceEEEcc---CCeEEEccCCCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q---VIE--------NDGVHYRITE---SNRLHINQANATDS 195 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~---~l~--------~~~~~~~~~~---~~sL~I~~v~~~D~ 195 (558)
+...+....+.+|+.++|.|.+.+.|.|.+.|+|+. . .+. ....++.+.. ..+|.|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 445567788999999999999999999999999853 1 111 0123555432 23799999999999
Q ss_pred eEEEEEEEeCCcee-eEEEEEEEeccC
Q psy10160 196 GEYRCVASNSYTSD-ENAVTIRVEGIF 221 (558)
Q Consensus 196 G~Y~C~a~N~~G~~-~~~~~l~V~~~~ 221 (558)
|.|.|.+.|..+.. ...+.|.|..++
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC---
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCC
Confidence 99999999986532 234577776543
No 417
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.06 E-value=5.8e-10 Score=93.03 Aligned_cols=86 Identities=17% Similarity=0.273 Sum_probs=65.8
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCC----eEEEEECC-------EEe-------------ccCCceEEEccC------C
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIP----QVFWYKDG-------QVI-------------ENDGVHYRITES------N 183 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p----~i~W~~~g-------~~l-------------~~~~~~~~~~~~------~ 183 (558)
..+....+.+|+.++|.|.+.+.|.+ .+.|++++ ..+ .....++.+..+ .
T Consensus 10 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 89 (126)
T 1eaj_A 10 TPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDA 89 (126)
T ss_dssp SSEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBC
T ss_pred CCCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeE
Confidence 34456678999999999999887653 49999864 222 111235555443 6
Q ss_pred eEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEec
Q psy10160 184 RLHINQANATDSGEYRCVASNSYTSDENAVTIRVEG 219 (558)
Q Consensus 184 sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 219 (558)
+|.|.+++.+|+|.|.|.+.|..|.....+.|.|..
T Consensus 90 sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 90 SINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 899999999999999999999999888889998853
No 418
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.05 E-value=8.1e-11 Score=108.26 Aligned_cols=126 Identities=14% Similarity=0.143 Sum_probs=79.9
Q ss_pred ceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEec---c--------CCceEEEc---cCCeEEEccCCCCCCeEEEEE
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIE---N--------DGVHYRIT---ESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~---~--------~~~~~~~~---~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
...+.+|+.+.|.|.+. |.|.+.|+|+ +..+. . ...++.+. .+.+|.|.+++.+|+|.|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 67789999999999998 8899999994 22211 0 11244422 234799999999999999999
Q ss_pred EEeCCc--eeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC--CCCcccccchhhhh
Q psy10160 202 ASNSYT--SDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ--LPSYGPHIKRAVEA 276 (558)
Q Consensus 202 a~N~~G--~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~--~~~~~~w~~~~l~~ 276 (558)
+.|..| .....+.|.|...+ .+|.+...+. ......|....+.| .+.|. +.+.+.|++++...
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~---------~~~~~~g~~v~l~C---~~~g~~p~~~~v~W~k~g~~l 154 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPP---------SSEELQANKATLVC---LISDFYPGAVTVAWKADSSPV 154 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCCBCCEEEEECC---------CHHHHHTTCEEEEE---EEEEEBSSCCEEEEEETTEEE
T ss_pred EecCCCceeECCCceEEEeCCCCcCCeeEecCC---------chhhhcCCCeEEEE---EeeeecCCCeEEEEEECCeec
Confidence 999988 34566778886322 2232221110 00011233344444 44454 35778999997655
Q ss_pred h
Q psy10160 277 E 277 (558)
Q Consensus 277 ~ 277 (558)
.
T Consensus 155 ~ 155 (211)
T 3tv3_L 155 K 155 (211)
T ss_dssp C
T ss_pred C
Confidence 3
No 419
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.05 E-value=2.1e-09 Score=91.67 Aligned_cols=88 Identities=20% Similarity=0.297 Sum_probs=65.8
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCC---CeEEEEECCEE--ec--------------cCCceEEEcc------CCeEEE
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPI---PQVFWYKDGQV--IE--------------NDGVHYRITE------SNRLHI 187 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~---p~i~W~~~g~~--l~--------------~~~~~~~~~~------~~sL~I 187 (558)
..++....+.+|++++|.|.+.+.|. +.+.|++++.. +. .-..|+.+.. +.+|.|
T Consensus 10 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 89 (139)
T 1pko_A 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRI 89 (139)
T ss_dssp ECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEE
T ss_pred ECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEE
Confidence 33455678899999999999987653 68999997641 10 0012444432 247999
Q ss_pred ccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 188 NQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
.+++.+|+|.|+|.+.|..|.....+.|.|.+|
T Consensus 90 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 90 QNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred ccCCHHHCEEEEEEEEcCCCceEEEEEEEEecC
Confidence 999999999999999999998888999999744
No 420
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.05 E-value=1.3e-10 Score=106.47 Aligned_cols=138 Identities=12% Similarity=0.147 Sum_probs=86.3
Q ss_pred eeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCceeeEEEEEEEecc
Q psy10160 141 FGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 220 (558)
+.+|+.++|.|.+ |.|.|.|+|+|..+... ...+++|.|.+++.+|+|.|+|.+.|..+ ..+.|.|...
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-----~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s---~~~~v~v~~~ 83 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-----TEDKKKWNLGSNAKDPRGMYQCKGSQNKS---KPLQVYYRMG 83 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-----ESSCCCEEEEEGGGCCEEEEEEESSSSCC---CCEEEEEEC-
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-----CCCCCeEEeCCCCcCCCEEEEEEecCCCC---eeEEEEEEEe
Confidence 3689999999999 88999999999887542 12456899999999999999999765332 2244544300
Q ss_pred ------C----------------------CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccch
Q psy10160 221 ------F----------------------IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKR 272 (558)
Q Consensus 221 ------~----------------------~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~ 272 (558)
. .++.+... ...+.. . +......|. |.|.|.+.|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~v~~------~---G~~v~L~C~--g~p~p~i~W~k~ 148 (204)
T 1sy6_A 84 SADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQT----PYKVSI------S---GTTVILTCP--QYPGSEILWQHN 148 (204)
T ss_dssp -----------------------------------CC----CCEEEE------E---TTEEEEECS--CCCSSCEEEEET
T ss_pred ccccccccccccccccccccccccccccccccceecC----Cceeee------c---CCcEEEEcC--CCCCCceEEEEC
Confidence 0 01111100 111111 1 344556676 689999999999
Q ss_pred hhhhhhhh-hhhh--hcccccchhh-hhhhHHHhhc
Q psy10160 273 AVEAEAAA-ADKK--RRSRRSLSVV-NKWSLRQAFT 304 (558)
Q Consensus 273 ~l~~~~~~-~~~~--~~grth~q~a-~~~t~g~~~~ 304 (558)
+....... .... ..+...+..+ .....|.|..
T Consensus 149 ~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C 184 (204)
T 1sy6_A 149 DKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVC 184 (204)
T ss_dssp TEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEE
T ss_pred CEECCCccCCceEecCCCEEEEeeCCccccCEEEEE
Confidence 76543321 1111 2455666777 7777777765
No 421
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.05 E-value=2.7e-10 Score=108.39 Aligned_cols=89 Identities=19% Similarity=0.287 Sum_probs=64.0
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EE---ec---------cCCceEEEc-----cCCeEEEccCC
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QV---IE---------NDGVHYRIT-----ESNRLHINQAN 191 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~---l~---------~~~~~~~~~-----~~~sL~I~~v~ 191 (558)
.+...+....+.+|+.++|.|.+.+.|.|.+.|+|.. .. +. ....++.+. ...+|.|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 4555667788999999999999999999999999832 11 10 011244431 12379999999
Q ss_pred CCCCeEEEEEEEeCCcee----eEEEEEEEec
Q psy10160 192 ATDSGEYRCVASNSYTSD----ENAVTIRVEG 219 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~~----~~~~~l~V~~ 219 (558)
.+|+|.|.|.+.|..+.. ...+.|.|..
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 999999999999986532 2345677764
No 422
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.05 E-value=1.5e-10 Score=107.31 Aligned_cols=134 Identities=13% Similarity=0.163 Sum_probs=81.8
Q ss_pred eCcEEEecCCceE--eeCCCcEEEEeEeecc---CC-CeEEEEECCEEeccCC---------ceEEEccCCeEEEccCCC
Q psy10160 128 VPVKVNITLETQV--FGVGSDISIPCDVDGY---PI-PQVFWYKDGQVIENDG---------VHYRITESNRLHINQANA 192 (558)
Q Consensus 128 ~p~~~~~~~~~~~--v~~G~~v~L~C~~~g~---P~-p~i~W~~~g~~l~~~~---------~~~~~~~~~sL~I~~v~~ 192 (558)
.+|.+...+.... +.+|+.+.|.|.+.|. |. |.|.|+|++..+.... .+|. ..++|.|.+++.
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~~~~ 85 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIR--VVSTLPIQHQDW 85 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEE--EEEEEECCHHHH
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEE--EEEEEEEcHHHc
Confidence 3555555444444 7899999999999998 44 7899999998765321 1221 124799999999
Q ss_pred CCCeEEEEEEEeCCcee--eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCC-ccc
Q psy10160 193 TDSGEYRCVASNSYTSD--ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPS-YGP 268 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~--~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~-~~~ 268 (558)
+|+|.|+|.|.|..+.. ...+.+ +.....+|.+. +....... ..+......|.+.| .|++ .+.
T Consensus 86 ~D~g~Y~C~~~~~~~~~~~~~~v~~-~~~~~~~P~v~-----------~~~~~~~~-~~g~~~~L~C~~~g~~P~~~~v~ 152 (218)
T 2rgs_A 86 MSGKEFKCKVNNKDLPSPIERTISK-IKGLVRAPQVY-----------ILPPPAEQ-LSRKDVSLTCLVVGFNPGDISVE 152 (218)
T ss_dssp HTTCCEEEEEEETTCSSCEEEEECC-CCCCCBCCEEE-----------EECCCGGG-TTSSEEEEEEEEEEEBSSCCEEE
T ss_pred CCCCeEEEEEECCcCCCcceEEEee-cCCCCCCCEEE-----------EECCChHH-hcCCceEEEEEEEeeeCCCcEEE
Confidence 99999999999987754 222211 01112222221 11110000 01334445666667 4555 899
Q ss_pred ccchhhhh
Q psy10160 269 HIKRAVEA 276 (558)
Q Consensus 269 w~~~~l~~ 276 (558)
|++++...
T Consensus 153 W~k~g~~~ 160 (218)
T 2rgs_A 153 WTSNGHTE 160 (218)
T ss_dssp EEETTEEE
T ss_pred EEECCEec
Confidence 99997654
No 423
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.04 E-value=1.7e-10 Score=106.61 Aligned_cols=130 Identities=13% Similarity=0.095 Sum_probs=79.6
Q ss_pred CCceEeeCCCcEEEEeEe-eccC-CCeEEEEECC--EEe-----------ccCCceEEEcc---CCeEEEccCCCCCCeE
Q psy10160 136 LETQVFGVGSDISIPCDV-DGYP-IPQVFWYKDG--QVI-----------ENDGVHYRITE---SNRLHINQANATDSGE 197 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~-~g~P-~p~i~W~~~g--~~l-----------~~~~~~~~~~~---~~sL~I~~v~~~D~G~ 197 (558)
|....+.+|+.++|.|.+ .+.| .|.+.|+|++ ..+ .....++.+.. +.+|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 556778999999999995 4443 5789999853 211 01123555432 2379999999999999
Q ss_pred EEEEEEeCCc--eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCCC-cccccchh
Q psy10160 198 YRCVASNSYT--SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLPS-YGPHIKRA 273 (558)
Q Consensus 198 Y~C~a~N~~G--~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~~-~~~w~~~~ 273 (558)
|.|.+.|..+ .......|.|.....+|.+...+.. .. ...| ......|.+.| .|+| .+.|++++
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~--~~-------~~~g---~~v~L~C~~~g~~P~~~~v~W~k~g 154 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPS--DE-------QLKS---GTASVVCLLNNFYPREAKVQWKVDN 154 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCC--HH-------HHHT---TEEEEEEEEEEEBSSCCEEEEEETT
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCC--hh-------hccC---CcEEEEEEEEeEcCCceEEEEEECC
Confidence 9999999887 2233456777544333333211100 00 0112 23335555556 4444 79999997
Q ss_pred hhhh
Q psy10160 274 VEAE 277 (558)
Q Consensus 274 l~~~ 277 (558)
....
T Consensus 155 ~~~~ 158 (216)
T 2xzc_L 155 ALQS 158 (216)
T ss_dssp EECC
T ss_pred eecC
Confidence 6543
No 424
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.04 E-value=4.8e-10 Score=106.78 Aligned_cols=92 Identities=18% Similarity=0.307 Sum_probs=54.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEE---ec-cC-------------CceEEE----ccCCeE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQV---IE-ND-------------GVHYRI----TESNRL 185 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~---l~-~~-------------~~~~~~----~~~~sL 185 (558)
+|.+...+....+.+|+.++|.|.+.+.|.|.+.|+|. +.. +. .. ++++.. ....+|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 34556667788899999999999999999999999982 111 00 00 011111 122479
Q ss_pred EEccCCCCCCeEEEEEEEeCCc---eeeEEEEEEEecc
Q psy10160 186 HINQANATDSGEYRCVASNSYT---SDENAVTIRVEGI 220 (558)
Q Consensus 186 ~I~~v~~~D~G~Y~C~a~N~~G---~~~~~~~l~V~~~ 220 (558)
.|.+++.+|+|.|.|.+.|..+ .......|.|..+
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecC
Confidence 9999999999999999999876 3345567777654
No 425
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.04 E-value=3e-10 Score=106.58 Aligned_cols=128 Identities=14% Similarity=0.288 Sum_probs=78.9
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEe--------------ccCCceEEEcc----CCeEEEccCCC
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVI--------------ENDGVHYRITE----SNRLHINQANA 192 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l--------------~~~~~~~~~~~----~~sL~I~~v~~ 192 (558)
...+....+.+|+.++|.|. .+.|.|.+.|+|+ +... .....++.+.. ..+|.|.+++.
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~ 82 (238)
T 2p1y_A 4 TQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATP 82 (238)
T ss_dssp EEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCG
T ss_pred eECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCc
Confidence 44567788999999999999 7889999999995 2111 00122444432 34799999999
Q ss_pred CCCeEEEEEEEeCCcee-----eEEEEEEEeccCCCC---------CCCCCCccccceeEEeceeeecccceeEEEEecc
Q psy10160 193 TDSGEYRCVASNSYTSD-----ENAVTIRVEGIFIHP---------SCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCT 258 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~~-----~~~~~l~V~~~~~~p---------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~ 258 (558)
+|+|.|.|.+.|..|.. .....|.|...+..+ .+... .. .+ .+..| ......|.
T Consensus 83 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~---p~-~~-----~v~~G---~~v~L~C~ 150 (238)
T 2p1y_A 83 SQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQS---PQ-SL-----TVWEG---ETAILNCS 150 (238)
T ss_dssp GGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEE---CS-EE-----EEETT---SCEEEEEE
T ss_pred ccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEcc---Cc-eE-----EEeCC---CeEEEEEE
Confidence 99999999999987631 133466665432100 11110 01 11 12233 33345666
Q ss_pred CCCCCCCcccccchh
Q psy10160 259 RAGQLPSYGPHIKRA 273 (558)
Q Consensus 259 ~~g~~~~~~~w~~~~ 273 (558)
+.+.|.+.+.|+++.
T Consensus 151 ~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 151 YENSAFDYFPWYQQF 165 (238)
T ss_dssp CCCTTCCEEEEEEEC
T ss_pred EecCCCCcEEEEEEC
Confidence 668888999999974
No 426
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.04 E-value=6.9e-10 Score=102.44 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=76.3
Q ss_pred ceEeeCCCcEEEEeEeeccCCCe---EEEEECCEEecc---------------CCceEEE----------ccCCeEEEcc
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIPQ---VFWYKDGQVIEN---------------DGVHYRI----------TESNRLHINQ 189 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p~---i~W~~~g~~l~~---------------~~~~~~~----------~~~~sL~I~~ 189 (558)
+..+..|++++|.|.+.+.|.|. |.|+|++..+.. ...+... ..+++|.|.+
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 45678999999999999988774 789997643310 0011111 1235799999
Q ss_pred CCCCCCeEEEEEEEeCCceeeE-EEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCccc
Q psy10160 190 ANATDSGEYRCVASNSYTSDEN-AVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGP 268 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~~~-~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~ 268 (558)
++.+|+|.|+|.+.|..|.... ...+.+..++ .....+. .. .....+......|...+.|++.+.
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~--~~~~~~~~~~~c~~~~~~P~~~~~ 155 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQP---ENHAEAQ---------EV--TIGPQSVAVARCVSTGGRPPARIT 155 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC---EEEEEEC---------CB--CCSSSCEEEEEEEEEEEBSCCEEE
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecCC---ceeeccc---------ce--eecceeeeeeeeeecCCCCCCEEE
Confidence 9999999999999998876653 3444443322 1110000 00 001112222222334478889999
Q ss_pred ccchhhhhh
Q psy10160 269 HIKRAVEAE 277 (558)
Q Consensus 269 w~~~~l~~~ 277 (558)
|++++....
T Consensus 156 w~~~~~~~~ 164 (225)
T 4fmk_A 156 WISSLGGEA 164 (225)
T ss_dssp EECSSCCEE
T ss_pred EEECCcccc
Confidence 998865443
No 427
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.03 E-value=8.1e-10 Score=106.69 Aligned_cols=87 Identities=16% Similarity=0.320 Sum_probs=62.0
Q ss_pred ecCCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEec----------------cCCceEEEcc-----CCeEEEc
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVIE----------------NDGVHYRITE-----SNRLHIN 188 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l~----------------~~~~~~~~~~-----~~sL~I~ 188 (558)
..|....+.+|+.++|.|.+.|.| .|.+.|+|++ ..+. ....|+.+.. ..+|.|.
T Consensus 31 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 110 (282)
T 1qok_A 31 QQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLS 110 (282)
T ss_dssp EECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEEC
Confidence 345577889999999999999885 6789999853 1110 0013555442 2479999
Q ss_pred cCCCCCCeEEEEEEEeCCce-----eeEEEEEEEecc
Q psy10160 189 QANATDSGEYRCVASNSYTS-----DENAVTIRVEGI 220 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~-----~~~~~~l~V~~~ 220 (558)
+++.+|+|.|.|.+.|..|. ....+.|.|...
T Consensus 111 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~ 147 (282)
T 1qok_A 111 SLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSG 147 (282)
T ss_dssp SCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC-
T ss_pred cCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecC
Confidence 99999999999999999761 123456777654
No 428
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.03 E-value=8.1e-11 Score=110.18 Aligned_cols=65 Identities=15% Similarity=0.370 Sum_probs=47.1
Q ss_pred CCcEEEEeEeecc-C-CCeEEEEECCEEeccCCce---EEEc--------cC-C------eEEEccCCCCCCeEEEEEEE
Q psy10160 144 GSDISIPCDVDGY-P-IPQVFWYKDGQVIENDGVH---YRIT--------ES-N------RLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 144 G~~v~L~C~~~g~-P-~p~i~W~~~g~~l~~~~~~---~~~~--------~~-~------sL~I~~v~~~D~G~Y~C~a~ 203 (558)
|+.+.|.|.+.|. | .+.|.|+|+|..+...... +... .+ + .|.|.....+|.|.|+|.|.
T Consensus 133 ~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~ 212 (231)
T 2w59_A 133 LSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAV 212 (231)
T ss_dssp SSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEE
T ss_pred cCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEE
Confidence 5579999999996 4 3689999999988643200 1111 22 2 47788888888999999999
Q ss_pred eCCce
Q psy10160 204 NSYTS 208 (558)
Q Consensus 204 N~~G~ 208 (558)
|....
T Consensus 213 n~~l~ 217 (231)
T 2w59_A 213 HEALP 217 (231)
T ss_dssp CTTST
T ss_pred cCCCC
Confidence 98654
No 429
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.03 E-value=6.9e-11 Score=109.57 Aligned_cols=122 Identities=19% Similarity=0.238 Sum_probs=80.4
Q ss_pred ceEeeCCCcEEEEeEeeccCC-----CeEEEEECCEEe------------ccCCceEEEcc------CCeEEEccCCCCC
Q psy10160 138 TQVFGVGSDISIPCDVDGYPI-----PQVFWYKDGQVI------------ENDGVHYRITE------SNRLHINQANATD 194 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~-----p~i~W~~~g~~l------------~~~~~~~~~~~------~~sL~I~~v~~~D 194 (558)
+..+.+|+.+.|.|.+.+.|. +.+.|++++... .....++.+.. +.+|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456789999999999999875 789999987432 11122444433 5689999999999
Q ss_pred CeEEEEEEEeCCceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC-CCCCCCcccccchh
Q psy10160 195 SGEYRCVASNSYTSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR-AGQLPSYGPHIKRA 273 (558)
Q Consensus 195 ~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~-~g~~~~~~~w~~~~ 273 (558)
+|.|+|.+.|. +..+..+.|.|..++..|.+...+ .. .+..|.... ..|.+ .+.|.+.+.|+++.
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~---~~-------~v~~G~~~~---l~C~~~~g~P~~~v~W~~~~ 149 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP---NK-------DLRPGNMVT---ITCSSYQGYPEAEVFWKDGQ 149 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC---------------CCSEEE---EEEEEEEEBSCCEEEEECTT
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC---Cc-------eecCCceEE---EEEecccccCCCeEEEEcCC
Confidence 99999999996 455566677776554333332211 11 112222334 44554 47899999999843
No 430
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.03 E-value=1.3e-09 Score=89.84 Aligned_cols=83 Identities=16% Similarity=0.274 Sum_probs=63.0
Q ss_pred CceEeeCCCcEEEEeEe-eccCCCe----EEEEECCEE-------------eccCCceEEEcc--------CCeEEEccC
Q psy10160 137 ETQVFGVGSDISIPCDV-DGYPIPQ----VFWYKDGQV-------------IENDGVHYRITE--------SNRLHINQA 190 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~-~g~P~p~----i~W~~~g~~-------------l~~~~~~~~~~~--------~~sL~I~~v 190 (558)
....+.+|+.++|.|.+ .+.|.+. +.|+|++.. ... ..++.+.. +.+|.|.++
T Consensus 8 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 8 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSE-SKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp SEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETT-CSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCC-cCcEEEecccccCCCCCcEEEEeec
Confidence 34678899999999999 5555554 999997532 111 23444443 558999999
Q ss_pred CCCCCeEEEEEEEe-CCceeeEEEEEEEecc
Q psy10160 191 NATDSGEYRCVASN-SYTSDENAVTIRVEGI 220 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N-~~G~~~~~~~l~V~~~ 220 (558)
+.+|+|.|.|.+.| ..|.....+.|.|..+
T Consensus 87 ~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~ 117 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK 117 (118)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred ChHHCeEEEEEEEECCCCCccceEEEEEEeC
Confidence 99999999999999 7888888899998654
No 431
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.03 E-value=2.5e-10 Score=104.93 Aligned_cols=127 Identities=17% Similarity=0.222 Sum_probs=78.8
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEec---------------cCCceEEEcc-----CCeEEEccCC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIE---------------NDGVHYRITE-----SNRLHINQAN 191 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~---------------~~~~~~~~~~-----~~sL~I~~v~ 191 (558)
+....+.+|+.+.|.|.+.|.| .|.+.|+|+ +.... ....|+.+.. +.+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4556789999999999999976 478999985 22210 0123555432 1389999999
Q ss_pred CCCCeEEEEEEEeCCceeeEEEEEEEec-cCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC-ccc
Q psy10160 192 ATDSGEYRCVASNSYTSDENAVTIRVEG-IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS-YGP 268 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~~~~~~~l~V~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~-~~~ 268 (558)
.+|+|.|.|.+.|.. .......|.|.. ++.+|.+...+ .. ..... +......|.+.|. |.| .+.
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~--~~-------~~~~~---g~~v~L~C~~~g~~P~p~~v~ 153 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLA--PG-------SAAQT---NSMVTLGCLVKGYFPEPVTVT 153 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEEC--CT-------TSCCC---SSEEEEEEEEEEEBSSCCEEE
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEec--CC-------ccccc---CCcEEEEEEEeeEecCCcEEE
Confidence 999999999999964 222335666753 12222211110 00 01112 3334455666576 777 899
Q ss_pred ccchhhh
Q psy10160 269 HIKRAVE 275 (558)
Q Consensus 269 w~~~~l~ 275 (558)
|++++..
T Consensus 154 W~~~~~~ 160 (210)
T 3d9a_H 154 WNSGSLS 160 (210)
T ss_dssp EGGGTBC
T ss_pred EeeCCcc
Confidence 9998754
No 432
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.03 E-value=2.7e-11 Score=113.40 Aligned_cols=137 Identities=12% Similarity=0.176 Sum_probs=67.2
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EEe-----------ccCCceEEEcc---CCeEEEccCCCC
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QVI-----------ENDGVHYRITE---SNRLHINQANAT 193 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~l-----------~~~~~~~~~~~---~~sL~I~~v~~~ 193 (558)
+.+...+....+.+|+.+.|.|.+.+.|.|.+.|+|++ ..+ .....++.... +.+|.|.+++.+
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 34445567778899999999999999998999999853 111 00012333222 227999999999
Q ss_pred CCeEEEEEEEeCCcee-eEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--ccccc
Q psy10160 194 DSGEYRCVASNSYTSD-ENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGPHI 270 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~-~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~w~ 270 (558)
|+|.|.|.+.|..+.. .....|.|.....+|.+...+. .. .... +......|.+.|.+++ .+.|+
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~--~~-------~~~~---g~~v~L~C~~~g~~p~~~~v~W~ 171 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPP--SS-------EQLT---SGGASVVCFLNNFYPKDINVKWK 171 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECC--CH-------HHHH---TTEEEEEEEEEEEBSSCEEEEEE
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCC--CH-------Hhhc---CCceEEEEEEccccCCceEEEEE
Confidence 9999999999987643 2234566654332333221110 00 0011 2233455656564443 69999
Q ss_pred chhhhhhh
Q psy10160 271 KRAVEAEA 278 (558)
Q Consensus 271 ~~~l~~~~ 278 (558)
+++.....
T Consensus 172 k~g~~~~~ 179 (233)
T 3bqu_C 172 IDGSERQN 179 (233)
T ss_dssp EC-----C
T ss_pred ECCeeCCC
Confidence 99866543
No 433
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.03 E-value=3e-10 Score=107.13 Aligned_cols=88 Identities=25% Similarity=0.351 Sum_probs=62.1
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEe-------------ccCCceEEEcc----CCeEEEccCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVI-------------ENDGVHYRITE----SNRLHINQANA 192 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l-------------~~~~~~~~~~~----~~sL~I~~v~~ 192 (558)
+...+....+.+|+.+.|.|.+.+.|.+.+.|+|. +... .....|+.+.. +.+|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 34556778889999999999999999999999982 1110 00012343332 23799999999
Q ss_pred CCCeEEEEEEEeCCc------eeeEEEEEEEec
Q psy10160 193 TDSGEYRCVASNSYT------SDENAVTIRVEG 219 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G------~~~~~~~l~V~~ 219 (558)
+|+|.|.|.+.|..| .......|.|..
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 999999999999433 223445677764
No 434
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.02 E-value=9.2e-10 Score=104.58 Aligned_cols=93 Identities=15% Similarity=0.242 Sum_probs=66.2
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeecc--CCCeEEEEECC--EEe----------------ccCCceEEEccC-----
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGY--PIPQVFWYKDG--QVI----------------ENDGVHYRITES----- 182 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~--P~p~i~W~~~g--~~l----------------~~~~~~~~~~~~----- 182 (558)
.++.+...+....+.+|+.++|.|.+.+. |.+.+.|+|.. ..+ .....|+.+..+
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 35667778888999999999999999983 77889999732 110 001135555422
Q ss_pred CeEEEccCCCCCCeEEEEEEEeC------------CceeeEEEEEEEecc
Q psy10160 183 NRLHINQANATDSGEYRCVASNS------------YTSDENAVTIRVEGI 220 (558)
Q Consensus 183 ~sL~I~~v~~~D~G~Y~C~a~N~------------~G~~~~~~~l~V~~~ 220 (558)
.+|.|.+++.+|+|.|.|.+.|. .+.......|.|...
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~ 134 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSG 134 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSC
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCC
Confidence 26999999999999999999997 333445567778653
No 435
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.02 E-value=7.4e-11 Score=108.62 Aligned_cols=130 Identities=15% Similarity=0.194 Sum_probs=80.6
Q ss_pred CCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEec-----------cCCceEEEcc---CCeEEEccCCCCCCeEEE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIE-----------NDGVHYRITE---SNRLHINQANATDSGEYR 199 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~-----------~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~ 199 (558)
+....+.+|+.++|.|.+.+.|.|.+.|+|+ +..+. ....++.+.. ..+|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 6677889999999999999999899999984 33221 0023554432 237999999999999999
Q ss_pred EEEEeCCc-ee--eEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CC-Ccccccchh
Q psy10160 200 CVASNSYT-SD--ENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LP-SYGPHIKRA 273 (558)
Q Consensus 200 C~a~N~~G-~~--~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~-~~~~w~~~~ 273 (558)
|.+.|..+ .. .....|.|...+ .+|.+...+. ... . .. +......|.+.|. |+ +.+.|++++
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~~~-~------~~---g~~v~L~C~~~g~~p~~~~v~W~k~g 153 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPP--SPE-E------LR---TNKATLVCLVNDFYPGSATVTWKANG 153 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCC--CHH-H------HH---TTEECCCEEEEEEBSSCCEEEEEETT
T ss_pred EEEEcccCcccccCCceEEEEccCCCCCCEEEeeCC--chH-h------cc---CCceEEEEEEEeeECCccEEEEEECC
Confidence 99998322 21 233556664332 2333221110 000 0 11 2223355656566 44 689999987
Q ss_pred hhhh
Q psy10160 274 VEAE 277 (558)
Q Consensus 274 l~~~ 277 (558)
....
T Consensus 154 ~~~~ 157 (212)
T 1nfd_E 154 ATIN 157 (212)
T ss_dssp EEEC
T ss_pred eEcC
Confidence 5543
No 436
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.02 E-value=1.6e-10 Score=106.13 Aligned_cols=75 Identities=13% Similarity=0.260 Sum_probs=56.6
Q ss_pred EecCCceE-eeCCCcEEEEeEeeccC---C-CeEEEEECCEEeccC---------CceEEEccCCeEEEccCCCCCCeEE
Q psy10160 133 NITLETQV-FGVGSDISIPCDVDGYP---I-PQVFWYKDGQVIEND---------GVHYRITESNRLHINQANATDSGEY 198 (558)
Q Consensus 133 ~~~~~~~~-v~~G~~v~L~C~~~g~P---~-p~i~W~~~g~~l~~~---------~~~~~~~~~~sL~I~~v~~~D~G~Y 198 (558)
..+|.... +.+|+.+.|.|.+.|.| . +.|.|+|++..+... +.+|. ..++|.|.+++.+|+|.|
T Consensus 6 ~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~~~L~I~~~~~~D~G~Y 83 (207)
T 2vol_A 6 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFR--SVSELPIMHQDWLNGKEF 83 (207)
T ss_dssp EECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEE--EEEEEECCHHHHHTTCCE
T ss_pred EeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEE--EEEEEEEehhHcCCCCEE
Confidence 33444444 78999999999999985 2 389999999776532 11221 124799999999999999
Q ss_pred EEEEEeCCcee
Q psy10160 199 RCVASNSYTSD 209 (558)
Q Consensus 199 ~C~a~N~~G~~ 209 (558)
+|.|.|..|..
T Consensus 84 ~C~a~~~~~~~ 94 (207)
T 2vol_A 84 KCRVNSAAFPA 94 (207)
T ss_dssp EEEEECTTCSS
T ss_pred EEEEEccCCCC
Confidence 99999998864
No 437
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.02 E-value=8.5e-10 Score=101.26 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=44.4
Q ss_pred EEEEeEeecc-CC-CeEEEEECCEEeccCCceEEEccCCeEEEccCCC-CCCeEEEEEEEeCCcee
Q psy10160 147 ISIPCDVDGY-PI-PQVFWYKDGQVIENDGVHYRITESNRLHINQANA-TDSGEYRCVASNSYTSD 209 (558)
Q Consensus 147 v~L~C~~~g~-P~-p~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~-~D~G~Y~C~a~N~~G~~ 209 (558)
+.|.|.+.|. |. |.+.|+++ ..+...........++++.+..... +|.|.|+|.+.|..+..
T Consensus 135 ~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~~~ 199 (207)
T 1ypz_E 135 TNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSETV 199 (207)
T ss_dssp TEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTEEE
T ss_pred CeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCccE
Confidence 6899999985 54 68999999 6665433333334566666655554 67899999999987653
No 438
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.02 E-value=7.3e-10 Score=105.25 Aligned_cols=133 Identities=12% Similarity=0.153 Sum_probs=85.6
Q ss_pred eCcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCc--eE-EEccCCeEEEccCCCCCCeEEEEEEEe
Q psy10160 128 VPVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGV--HY-RITESNRLHINQANATDSGEYRCVASN 204 (558)
Q Consensus 128 ~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~--~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N 204 (558)
.+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+..... +. ....+++|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 3566666665 66889999999999975 5778999999865432100 00 011345799999999999999999987
Q ss_pred CCc-----eeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCCcccccchhhhh
Q psy10160 205 SYT-----SDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPSYGPHIKRAVEA 276 (558)
Q Consensus 205 ~~G-----~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~~~~w~~~~l~~ 276 (558)
..+ ..+..+.|.|.+....|.+...+. . .+.. +..+...|.+.+. ++.+.|++++...
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~---~-------~V~~---G~~vtL~C~~~~~-~~~~~w~k~g~~~ 146 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLYEKPSLSAQPG---P-------TVLA---GESVTLSCSSRSS-YDMYHLSREGEAH 146 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSSCCCEEECSSC---T-------TCBT---TCEEEEEEECSSC-CSEEEEEETTSSC
T ss_pred cCCCccccccCCCEEEecccCCCCcceEccCC---C-------ccCC---CCEEEEEEeCCCC-CcEEEEEECCccc
Confidence 532 235677888876544444332221 0 1122 3334455555454 4688999987544
No 439
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.02 E-value=2.9e-10 Score=108.83 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=82.6
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE--CCEE------------eccC---CceEEEcc----CCeEEEcc
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK--DGQV------------IEND---GVHYRITE----SNRLHINQ 189 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--~g~~------------l~~~---~~~~~~~~----~~sL~I~~ 189 (558)
.+...+....+.+|+.++|.|.+. .|.+.+.|+| .+.. .... ..|+.+.. +.+|.|.+
T Consensus 28 ~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~ 106 (268)
T 3pl6_D 28 GVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQR 106 (268)
T ss_dssp SCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECS
T ss_pred eeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECC
Confidence 344556677889999999999987 5888999998 2211 1111 03555543 45799999
Q ss_pred CCCCCCeEEEEEEEeC--CceeeEEEEEEEecc---CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC
Q psy10160 190 ANATDSGEYRCVASNS--YTSDENAVTIRVEGI---FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP 264 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~--~G~~~~~~~l~V~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~ 264 (558)
++.+|+|.|.|.+.|. .+.......|.|... ..+|...... .. ...+.. +......|.+.|.++
T Consensus 107 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~-~~-------~~~~~~---g~~v~L~C~~~g~~p 175 (268)
T 3pl6_D 107 TERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFE-PS-------EAEISH---TQKATLVCLATGFYP 175 (268)
T ss_dssp CCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEEC-CC-------HHHHHH---HSEEEEEEEEEEEBS
T ss_pred CCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeC-CC-------cccccC---CCceEEEEEECcccC
Confidence 9999999999999984 333344556777642 1122211000 00 000111 333445566657555
Q ss_pred C--cccccchhhhhh
Q psy10160 265 S--YGPHIKRAVEAE 277 (558)
Q Consensus 265 ~--~~~w~~~~l~~~ 277 (558)
+ .+.|++++....
T Consensus 176 ~~~~v~W~~~g~~l~ 190 (268)
T 3pl6_D 176 DHVELSWWVNGKEVH 190 (268)
T ss_dssp SCEEEEEEESSSEEC
T ss_pred CCeEEEEEECCEECC
Confidence 5 789999875543
No 440
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.01 E-value=8.9e-10 Score=102.51 Aligned_cols=128 Identities=13% Similarity=0.162 Sum_probs=80.4
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEec----------------cCCceEEEcc-----CCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVIE----------------NDGVHYRITE-----SNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l~----------------~~~~~~~~~~-----~~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|.. ..+. ....|+.+.. +.+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456789999999999999887 7889999853 2110 0123555542 248999999
Q ss_pred CCCCCeEEEEEEEeCCc-----e---eeEEEEEEEecc-CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC
Q psy10160 191 NATDSGEYRCVASNSYT-----S---DENAVTIRVEGI-FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG 261 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G-----~---~~~~~~l~V~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g 261 (558)
+.+|+|.|.|.+.|..| . ....+.|.|... +.+|.+...+ ... .... +......|.+.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--~~~-------~~~~---g~~v~L~C~~~g 154 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLA--PSS-------KSTS---GGTAALGCLVKD 154 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEEC--CCT-------TCCC---CCEEEEEEEEEE
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEec--ccc-------cccC---CCcEEEEEEEEe
Confidence 99999999999999875 2 123457777652 1222221100 000 0111 333445565556
Q ss_pred C-CCC-cccccchhhh
Q psy10160 262 Q-LPS-YGPHIKRAVE 275 (558)
Q Consensus 262 ~-~~~-~~~w~~~~l~ 275 (558)
. |+| .+.|++++..
T Consensus 155 ~~P~p~~v~W~~~~~~ 170 (225)
T 1op3_H 155 YFPEPVTVSWNSGALT 170 (225)
T ss_dssp EBSSCCEEECCTTSCC
T ss_pred EECCCeEEEEecCCCc
Confidence 5 666 8999998754
No 441
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.00 E-value=1.8e-09 Score=83.87 Aligned_cols=83 Identities=24% Similarity=0.311 Sum_probs=60.7
Q ss_pred CceEeeCCCcEEEEeEeec-cCCCeEEEEECC----EEeccCCc-eEEEcc-C----CeEEEccCCCCCCeEEEEEEEeC
Q psy10160 137 ETQVFGVGSDISIPCDVDG-YPIPQVFWYKDG----QVIENDGV-HYRITE-S----NRLHINQANATDSGEYRCVASNS 205 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g----~~l~~~~~-~~~~~~-~----~sL~I~~v~~~D~G~Y~C~a~N~ 205 (558)
....+..|+.+.|.|.+.+ .|+|.|+|.|.+ .++..... +....+ + ..|.|.+|..+|+|.|+|.|.|.
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~ 101 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFN 101 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEET
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCC
Confidence 3556789999999999966 689999999965 23322111 111111 1 26999999999999999999999
Q ss_pred Cceee-EEEEEEEec
Q psy10160 206 YTSDE-NAVTIRVEG 219 (558)
Q Consensus 206 ~G~~~-~~~~l~V~~ 219 (558)
.|... +++.|.|.+
T Consensus 102 ~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 102 SQVINSHSVTIHVRE 116 (122)
T ss_dssp TEEEECCCEEEEEC-
T ss_pred CCceeeeEEEEEEEe
Confidence 99874 667787754
No 442
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.00 E-value=1.2e-09 Score=103.86 Aligned_cols=87 Identities=16% Similarity=0.196 Sum_probs=59.6
Q ss_pred ecCCceEeeCCCcEEEEeEeecc--CCCeEEEEECC--E--Eec-------------cCCceEEEccC-----CeEEEcc
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGY--PIPQVFWYKDG--Q--VIE-------------NDGVHYRITES-----NRLHINQ 189 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~--P~p~i~W~~~g--~--~l~-------------~~~~~~~~~~~-----~sL~I~~ 189 (558)
..+....+.+|+.++|.|.+.+. |.+.+.|+|.. . ... ....++.+..+ .+|.|.+
T Consensus 13 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 92 (257)
T 3gkz_A 13 QESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKS 92 (257)
T ss_dssp EEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECS
T ss_pred ECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECC
Confidence 34556678999999999999994 47889999832 1 110 01134554432 2699999
Q ss_pred CCCCCCeEEEEEEEeCC----ceeeEEEEEEEecc
Q psy10160 190 ANATDSGEYRCVASNSY----TSDENAVTIRVEGI 220 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~----G~~~~~~~l~V~~~ 220 (558)
++.+|+|.|.|.+.|.. +.....+.|.|..+
T Consensus 93 v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 93 VSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp CCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred CChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 99999999999999972 22234567777654
No 443
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.00 E-value=5e-10 Score=105.56 Aligned_cols=87 Identities=21% Similarity=0.314 Sum_probs=62.1
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEE--------------CCEEeccCC---ceEEEccC----CeEEEccC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYK--------------DGQVIENDG---VHYRITES----NRLHINQA 190 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~--------------~g~~l~~~~---~~~~~~~~----~sL~I~~v 190 (558)
+...+....+.+|+.++|.| ..+.|.+.+.|+| ++....... .++.+... .+|.|.++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v 83 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPT 83 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSC
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCC
Confidence 44556677889999999999 7788999999998 222222211 45555432 37999999
Q ss_pred CCCCCeEEEEEEEeC----CceeeEEEEEEEec
Q psy10160 191 NATDSGEYRCVASNS----YTSDENAVTIRVEG 219 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~----~G~~~~~~~l~V~~ 219 (558)
+.+|+|.|.|.+.|. .+.......|.|..
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (245)
T 4ei6_B 84 ALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE 116 (245)
T ss_dssp CGGGCEEEEEEEECSSTTCCCEECCCEEEEEES
T ss_pred CHhHCEEEEEEEccCCCcceEEEcCCcEEEEec
Confidence 999999999999963 23334455677754
No 444
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.00 E-value=8.6e-11 Score=108.98 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=78.7
Q ss_pred CCceEeeCCCcEEEEeEeec-cCCCe----EEEEECCEEecc------------CCceEEEc--------cCCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDG-YPIPQ----VFWYKDGQVIEN------------DGVHYRIT--------ESNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g-~P~p~----i~W~~~g~~l~~------------~~~~~~~~--------~~~sL~I~~v 190 (558)
+....+.+|+.+.|.|.+.+ .|.+. +.|+|++..... ...++.+. .+++|.|.++
T Consensus 6 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 85 (221)
T 3eow_R 6 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGL 85 (221)
T ss_dssp CCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCS
T ss_pred CCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccC
Confidence 34556789999999999954 55544 999998642211 01233333 2568999999
Q ss_pred CCCCCeEEEEEEEeCC-ceeeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccce-eEEEEeccCCCCCCCccc
Q psy10160 191 NATDSGEYRCVASNSY-TSDENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYS-QFCCESCTRAGQLPSYGP 268 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~-G~~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~c~~~~~~g~~~~~~~ 268 (558)
+.+|+|.|+|.+.|.. |.....+.|.|..+| .+...+ ... ...|... ...|... .|.|+|.+.
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P---~~~~~~---------~~~-~~~g~~~~~l~C~~~--~g~P~p~v~ 150 (221)
T 3eow_R 86 RVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKP---QNTAEV---------QKV-QLTGEPVPMARCVST--GGRPPAQIT 150 (221)
T ss_dssp SCCCCSCBEEEEEESSSCSCEEECCCCCCCCC---EEEEEE---------ECC-CCCSSSCCEEEEEEE--SCSSCCCEE
T ss_pred ChHHCeEEEEEEEeCCCCceEEEEEEEEEECC---Cceeec---------CCc-ccCCceEEEEEEECC--CccCCCeeE
Confidence 9999999999999987 777788888885432 221100 000 0112222 2444422 278999999
Q ss_pred ccchh
Q psy10160 269 HIKRA 273 (558)
Q Consensus 269 w~~~~ 273 (558)
|+++.
T Consensus 151 W~k~~ 155 (221)
T 3eow_R 151 WHSDL 155 (221)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99864
No 445
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.00 E-value=7.4e-10 Score=93.66 Aligned_cols=88 Identities=16% Similarity=0.240 Sum_probs=63.7
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CE---EeccCCceEEEccCC---eEEEccCCCCCCeEEEEEE
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQ---VIENDGVHYRITESN---RLHINQANATDSGEYRCVA 202 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~---~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a 202 (558)
.+...+....+.+|+.++|.|.+.+. +.+.|+|+ +. .+.....+|.+..++ +|.|.+++.+|+|.|.|.+
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a 96 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQ 96 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEE
Confidence 34455677889999999999999987 88999987 32 222233466654433 6999999999999999999
Q ss_pred EeCCce----eeEEEEEEEecc
Q psy10160 203 SNSYTS----DENAVTIRVEGI 220 (558)
Q Consensus 203 ~N~~G~----~~~~~~l~V~~~ 220 (558)
.|..|. ......|.|.+.
T Consensus 97 ~n~~g~~~~~~g~gt~L~V~~~ 118 (133)
T 3khq_A 97 KCDSANHNVTDSCGTELLVLGF 118 (133)
T ss_dssp SSCC-------CCCEEEEEC--
T ss_pred EeCCCCcceeECCCEEEEEEec
Confidence 998763 234567888653
No 446
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.00 E-value=9.6e-10 Score=89.31 Aligned_cols=85 Identities=22% Similarity=0.364 Sum_probs=59.9
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCC-----eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIP-----QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVAS 203 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p-----~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~ 203 (558)
+|.+...+.. .+.+|+.|+|.|.+.+.|.+ .+.|+|+|..+.. ...+..|.|.+++.+|+|.|.|.+.
T Consensus 8 kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~------~~~~~~l~i~~v~~~dsG~Y~C~~~ 80 (108)
T 4hwn_A 8 APILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQS------RGLSSEFQIPTASEDHSGSYWCEAA 80 (108)
T ss_dssp CCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEETTEEEEE------EESCCEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccC------CCcccEEEeCccCcccCeEEEEEEE
Confidence 4555555543 57899999999999876655 4999999987752 1245689999999999999999999
Q ss_pred eCCc---eeeEEEEEEEecc
Q psy10160 204 NSYT---SDENAVTIRVEGI 220 (558)
Q Consensus 204 N~~G---~~~~~~~l~V~~~ 220 (558)
|..| ..+..+.|.|.++
T Consensus 81 ~~~~~~~~~S~~l~L~V~g~ 100 (108)
T 4hwn_A 81 TEDNQVWKQSPQLEIRVQGA 100 (108)
T ss_dssp CTTSSSEEECCCEEECCBC-
T ss_pred eCCCceeccCCCEEEEEEec
Confidence 9865 3345566666543
No 447
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.99 E-value=6.9e-10 Score=102.91 Aligned_cols=128 Identities=16% Similarity=0.229 Sum_probs=79.9
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---ec---------------cCCceEEEcc-----CCeEEEc
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---IE---------------NDGVHYRITE-----SNRLHIN 188 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l~---------------~~~~~~~~~~-----~~sL~I~ 188 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|+. .. +. ....|+.+.. +.+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 3456788999999999999876 6789999843 11 10 0013555543 2389999
Q ss_pred cCCCCCCeEEEEEEEeCCc-----eeeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC
Q psy10160 189 QANATDSGEYRCVASNSYT-----SDENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ 262 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G-----~~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~ 262 (558)
+++.+|+|.|.|.+.|..| .......|.|...+ .+|.+...+ . ...... +......|.+.|.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~---~------~~~~~~---g~~v~L~C~~~g~ 154 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLA---P------GSAAQT---NSMVTLGCLVKGY 154 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEEC---C------CSCCCC---SSEEEEEEEEEEE
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEcc---c------cccccC---CCcEEEEEEEccE
Confidence 9999999999999999765 22234567775421 122211100 0 000112 3334455666565
Q ss_pred -CCC-cccccchhhh
Q psy10160 263 -LPS-YGPHIKRAVE 275 (558)
Q Consensus 263 -~~~-~~~w~~~~l~ 275 (558)
|.| .+.|++++..
T Consensus 155 ~P~p~~v~W~~~g~~ 169 (222)
T 1q9r_B 155 FPEPVTVTWNSGSLS 169 (222)
T ss_dssp BSSCCEEEEGGGTBC
T ss_pred ECCCCEEEEecCCeE
Confidence 777 9999998654
No 448
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.99 E-value=8.2e-10 Score=101.32 Aligned_cols=146 Identities=12% Similarity=0.111 Sum_probs=83.6
Q ss_pred cCceeEEeccCCCCC----CcEEEEeCCcccCCCCc-----eeeccccc---------e---eeceeEEeeccceee--E
Q psy10160 63 YGTILSSAFPSESAS----PVVTQTTTTTTEATSPH-----VYAALTHC---------V---PWSNVCLFGARSGYL--K 119 (558)
Q Consensus 63 ~~~~~~~~~~~~~p~----p~v~W~~~~~~~~~~~~-----~~~g~~~~---------~---~~~~~~~~~~~~~~~--~ 119 (558)
++.+.+.|...+.++ +.|.|++++..+..... ...|.+.- . .-.|.|.+.+..+.. .
T Consensus 18 G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~~~ 97 (207)
T 1l6x_A 18 SRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE 97 (207)
T ss_dssp TSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEE
T ss_pred CCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcceE
Confidence 446678898877652 48999999865433210 00111100 0 123566666654432 1
Q ss_pred Eeeec--eeeeCcEEEecCCceEeeCCCcEEEEeEeecc-CCC-eEEEEECCEEeccCC-ceEEEccCCe------EEEc
Q psy10160 120 ETQNG--GYLVPVKVNITLETQVFGVGSDISIPCDVDGY-PIP-QVFWYKDGQVIENDG-VHYRITESNR------LHIN 188 (558)
Q Consensus 120 ~~~~~--~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~p-~i~W~~~g~~l~~~~-~~~~~~~~~s------L~I~ 188 (558)
..... .+..+|.+.+.+.......|+.+.|.|.+.|. |.+ .+.|+|+|..+.... .++....+++ |.|.
T Consensus 98 ~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~ 177 (207)
T 1l6x_A 98 KTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVD 177 (207)
T ss_dssp EEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEE
T ss_pred EEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEEC
Confidence 11111 23456666554433222356679999999995 543 899999999875321 1122234443 4454
Q ss_pred cCCCCCCeEEEEEEEeCCce
Q psy10160 189 QANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~ 208 (558)
....+|.|.|+|.|.|....
T Consensus 178 ~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 178 KSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp HHHHHTTCCEEEEEECTTSG
T ss_pred HHHcCCCCEEEEEEEcCCcC
Confidence 44456899999999997643
No 449
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.98 E-value=8.6e-10 Score=104.59 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=61.9
Q ss_pred EecCCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEec----------------cCCceEEEccC-----CeEEE
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIE----------------NDGVHYRITES-----NRLHI 187 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~----------------~~~~~~~~~~~-----~sL~I 187 (558)
...+....+.+|+.++|.|.+.|.| .|.+.|+|. +..+. ....++.+..+ .+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 3456677889999999999999854 778999982 21110 00124544432 24999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee-eEEEEEEEec
Q psy10160 188 NQANATDSGEYRCVASNSYTSD-ENAVTIRVEG 219 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~ 219 (558)
.+++.+|+|.|.|.+.|..+.. .....|.|..
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 9999999999999999976655 3556777764
No 450
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.97 E-value=7.3e-10 Score=103.54 Aligned_cols=66 Identities=18% Similarity=0.371 Sum_probs=47.8
Q ss_pred EeeCCCcEEEEeEeecc-CC-CeEEEEE-CCEEeccC--------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 140 VFGVGSDISIPCDVDGY-PI-PQVFWYK-DGQVIEND--------GVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~-p~i~W~~-~g~~l~~~--------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
.+.+|+.+.|.|.+.|. |. +.+.|++ +|..+... +..|.. ...|.|.+... | |.|+|.+.|..+.
T Consensus 141 ~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~--~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 141 ETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMK--FSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp HHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEE--EEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred hhccCCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEE--EEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 35678999999999987 76 5899999 77666421 112221 13688888775 5 9999999998765
Q ss_pred e
Q psy10160 209 D 209 (558)
Q Consensus 209 ~ 209 (558)
.
T Consensus 217 ~ 217 (230)
T 1ypz_F 217 G 217 (230)
T ss_dssp T
T ss_pred C
Confidence 4
No 451
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.97 E-value=2.7e-09 Score=86.60 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=56.4
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E---Eec--------cCCceEEEccC---CeEEEccCCCCCCe
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q---VIE--------NDGVHYRITES---NRLHINQANATDSG 196 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~---~l~--------~~~~~~~~~~~---~sL~I~~v~~~D~G 196 (558)
...|....+.+|+.++|.|.+.+.|.|.+.|+|+. . .+. ....++.+... .+|.|.+++.+|+|
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 84 (108)
T 1jhl_L 5 TQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFA 84 (108)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCCS
T ss_pred eccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHCE
Confidence 34566778899999999999999999999999853 1 111 01235554322 37999999999999
Q ss_pred EEEEEEEeCC
Q psy10160 197 EYRCVASNSY 206 (558)
Q Consensus 197 ~Y~C~a~N~~ 206 (558)
.|.|.+.|..
T Consensus 85 ~Y~C~~~n~~ 94 (108)
T 1jhl_L 85 MYICQQHNEY 94 (108)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEccCC
Confidence 9999999974
No 452
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.97 E-value=8.6e-10 Score=102.72 Aligned_cols=68 Identities=16% Similarity=0.341 Sum_probs=46.7
Q ss_pred eeCCCcEEEEeEeecc-C-CCeEEEEECCEEecc----------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 141 FGVGSDISIPCDVDGY-P-IPQVFWYKDGQVIEN----------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~-P-~p~i~W~~~g~~l~~----------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+.+|+.+.|.|.+.+. | .+.+.| ++..+.. .+..|.+ .++|.|.+...+| |.|+|.+.|..+.
T Consensus 141 ~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-~~ytC~v~h~~~~ 215 (226)
T 3mlr_H 141 STSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSN 215 (226)
T ss_dssp STTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEE--EEEEEEEGGGTTT-CCCEEEEEEGGGT
T ss_pred ccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEE--EEEEEECHhHcCC-CeEEEEEEECCCC
Confidence 4579999999999885 4 346999 4433221 1112222 1368999999899 9999999998876
Q ss_pred eeEEE
Q psy10160 209 DENAV 213 (558)
Q Consensus 209 ~~~~~ 213 (558)
.....
T Consensus 216 ~~~~~ 220 (226)
T 3mlr_H 216 TKVDK 220 (226)
T ss_dssp EEEEE
T ss_pred cCeEE
Confidence 55433
No 453
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.97 E-value=7.5e-10 Score=104.53 Aligned_cols=89 Identities=18% Similarity=0.277 Sum_probs=63.2
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccC-----CCeEEEEECC--EE---ecc--------CCceEEEcc---CCeEEEccC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYP-----IPQVFWYKDG--QV---IEN--------DGVHYRITE---SNRLHINQA 190 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P-----~p~i~W~~~g--~~---l~~--------~~~~~~~~~---~~sL~I~~v 190 (558)
+...+....+.+|+.++|.|.+.+.| .|.+.|+|+. .. +.. ...++.+.. ..+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 34456778899999999999999988 6899999842 11 110 123555432 237999999
Q ss_pred CCCCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 191 NATDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
+.+|+|.|.|.+.|..+.. ...+.|.|..+
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECC
Confidence 9999999999999986642 23457777654
No 454
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.96 E-value=2.8e-10 Score=106.41 Aligned_cols=129 Identities=16% Similarity=0.196 Sum_probs=79.2
Q ss_pred CCceEeeCCCcEEEEeEeeccCC-C-eEEEEECC--EEe---c--------cCCceEEEcc---CCeEEEccCCCCCCeE
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPI-P-QVFWYKDG--QVI---E--------NDGVHYRITE---SNRLHINQANATDSGE 197 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~-p-~i~W~~~g--~~l---~--------~~~~~~~~~~---~~sL~I~~v~~~D~G~ 197 (558)
+....+.+|+.++|.|.+.+.|. + .+.|+|++ ..+ . ....++.... +.+|.|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 56677899999999999998654 4 69999863 211 0 0123454432 2379999999999999
Q ss_pred EEEEEEeCCce---eeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCCC--cccccc
Q psy10160 198 YRCVASNSYTS---DENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLPS--YGPHIK 271 (558)
Q Consensus 198 Y~C~a~N~~G~---~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~~--~~~w~~ 271 (558)
|.|.+.|..+. ....+.|.|...+ .+|.+...+. . ... ..|.... ..|.+.|.+++ .+.|++
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~--~-~~~------~~g~~v~---L~C~~~g~~p~~~~v~W~k 173 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPP--S-SEE------LQANKAT---LVCLISDFFPGAVTVAWKA 173 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECC--C-HHH------HTTSCCC---EEECCCBCSSCCCEEEEEE
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCC--C-hhH------hcCCceE---EEEEEEEEcCCceEEEEEE
Confidence 99999999882 2234556663322 2333221110 0 000 1122233 55666665443 799999
Q ss_pred hhhhh
Q psy10160 272 RAVEA 276 (558)
Q Consensus 272 ~~l~~ 276 (558)
++...
T Consensus 174 ~g~~l 178 (234)
T 2j6e_L 174 DGAPV 178 (234)
T ss_dssp TTEEC
T ss_pred CCEEC
Confidence 87654
No 455
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.96 E-value=2.1e-09 Score=95.67 Aligned_cols=77 Identities=12% Similarity=0.255 Sum_probs=51.2
Q ss_pred EEEecCCceEeeCCCcEEEEeEeec-cCCC--eEEEEECCEEeccCCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDG-YPIP--QVFWYKDGQVIENDGVHYRITESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g-~P~p--~i~W~~~g~~l~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.+.+.+.+..+.+|+.++|.|.+.| .|.+ .|.|+|++..+.... ......+.+|.+.....+|.+.|+|+|.|..+
T Consensus 88 ~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~-~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 88 RVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREP-AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEE-CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred CCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccccc-CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 3444555556889999999999988 4554 489999999886421 00001122577654444445599999999877
Q ss_pred e
Q psy10160 208 S 208 (558)
Q Consensus 208 ~ 208 (558)
.
T Consensus 167 ~ 167 (185)
T 1iam_A 167 P 167 (185)
T ss_dssp G
T ss_pred c
Confidence 3
No 456
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.95 E-value=7.5e-10 Score=105.69 Aligned_cols=71 Identities=13% Similarity=0.261 Sum_probs=45.2
Q ss_pred eeCCCcEEEEeEeeccCC--CeEEEEECCEEecc----------CCceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 141 FGVGSDISIPCDVDGYPI--PQVFWYKDGQVIEN----------DGVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 141 v~~G~~v~L~C~~~g~P~--p~i~W~~~g~~l~~----------~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+..|+.+.|.|.+.|.++ +.+.| ++..+.. .+..|.+ .++|.|.....+| |.|+|.+.|..+.
T Consensus 139 ~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~--~s~L~i~~~~~~~-~~ytC~v~h~~~~ 213 (263)
T 3iu4_H 139 GSTSGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL--SSVVTVPSSSLGT-QTYICNVNHKPSN 213 (263)
T ss_dssp C----EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE--EEEEEEETTHHHH-CCCEEEEEEGGGT
T ss_pred cccCCcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEE--EEEEEECHhHcCC-CEEEEEEEECCCC
Confidence 457999999999988543 56999 4433321 1112221 1368898888888 9999999999877
Q ss_pred eeEEEEEE
Q psy10160 209 DENAVTIR 216 (558)
Q Consensus 209 ~~~~~~l~ 216 (558)
......+.
T Consensus 214 ~~~~~~~~ 221 (263)
T 3iu4_H 214 TKVDKKVE 221 (263)
T ss_dssp EEEEEECC
T ss_pred cceeEEEc
Confidence 65544444
No 457
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.95 E-value=2e-09 Score=102.26 Aligned_cols=123 Identities=18% Similarity=0.292 Sum_probs=78.6
Q ss_pred cCCceEeeCCCcEEEEeEeeccC--CCeEEEEEC--CEEec----------------cCCceEEEcc-----CCeEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP--IPQVFWYKD--GQVIE----------------NDGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~--g~~l~----------------~~~~~~~~~~-----~~sL~I~~ 189 (558)
.|....+.+|+.++|.|.+.|.| .|.+.|+|+ +..+. ....|+.+.. ..+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 35567889999999999999986 678999984 22210 0123555443 23799999
Q ss_pred CCCCCCeEEEEEEEeCCce-----eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC
Q psy10160 190 ANATDSGEYRCVASNSYTS-----DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP 264 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~-----~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~ 264 (558)
++.+|+|.|.|.+.|..|. ....+.|.|..+ |.+...| ..+ .+..| ....+.|.+.+.++
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~---~~v~~~p----~~~-----~v~~G---~~v~L~C~~~~~~~ 150 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD---IELTQTP----LSL-----PVSLG---DQASISCRSSQSIV 150 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC---CCEEEEC----SEE-----EECTT---CCEEEEEEESSCCB
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeeccc---ccEEecC----cEE-----EEecC---CcEEEEeEecCccc
Confidence 9999999999999998763 223466777432 2111111 111 12233 33345555667776
Q ss_pred C-----cccccch
Q psy10160 265 S-----YGPHIKR 272 (558)
Q Consensus 265 ~-----~~~w~~~ 272 (558)
+ .+.|+++
T Consensus 151 ~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 151 HSNGNTYLEWYLQ 163 (256)
T ss_dssp CTTSCBCEEEEEE
T ss_pred ccccceEEEEEEE
Confidence 5 8999994
No 458
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.95 E-value=5.8e-09 Score=103.59 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=28.9
Q ss_pred cCCeEEEcCCCCCCCEEEEEEEEeCCcceE-EEEEEEE
Q psy10160 12 NKNMLTIKRVEPERLGAYTCQAYNGLGRAV-SWTVTLQ 48 (558)
Q Consensus 12 ~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~-s~~l~V~ 48 (558)
.+.+|.|.+++.+|+|.|+|.+.|..+... ...+.|.
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~ 289 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY 289 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeec
Confidence 567999999999999999999999776543 3344443
No 459
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.94 E-value=1.9e-09 Score=102.39 Aligned_cols=126 Identities=15% Similarity=0.223 Sum_probs=78.5
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEec----------------cCCceEEEccC-----CeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVIE----------------NDGVHYRITES-----NRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l~----------------~~~~~~~~~~~-----~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|.. ..+. ....++.+..+ .+|.|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3456689999999999999976 6789999732 1110 01124544432 24999999
Q ss_pred CCCCCeEEEEEEEeC----CceeeEEEEEEEeccCC-------------CCCCCCCCccccceeEEeceeeecccceeEE
Q psy10160 191 NATDSGEYRCVASNS----YTSDENAVTIRVEGIFI-------------HPSCRDLPLFANCKLIVEGRYCQHHYYSQFC 253 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~----~G~~~~~~~l~V~~~~~-------------~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 253 (558)
+.+|+|.|.|.+.|. .+.....+.|.|...+. +|.+...+ . . ..+..| ..+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p---~-~-----~~v~~G---~~v 156 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP---S-S-----LSASLG---ERV 156 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC---S-E-----EEECTT---CCE
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC---C-e-----EEEECC---CCE
Confidence 999999999999998 33344556777764210 11111111 0 0 112333 334
Q ss_pred EEeccCCCCCCCcccccchh
Q psy10160 254 CESCTRAGQLPSYGPHIKRA 273 (558)
Q Consensus 254 c~~~~~~g~~~~~~~w~~~~ 273 (558)
.+.|.+.+.+.+.+.|+++.
T Consensus 157 ~L~C~~~~~~~~~v~W~k~~ 176 (256)
T 3umt_A 157 SITCRASQDIGSNLNWLQQK 176 (256)
T ss_dssp EEEEEESSCCTTCEEEEEEC
T ss_pred EEEEEEecCCCcEEEEEEEC
Confidence 45566667888899999853
No 460
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.94 E-value=2.5e-09 Score=99.00 Aligned_cols=128 Identities=16% Similarity=0.225 Sum_probs=80.0
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---e-c--c---C---------CceEEEcc---C--CeEEEc
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---I-E--N---D---------GVHYRITE---S--NRLHIN 188 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l-~--~---~---------~~~~~~~~---~--~sL~I~ 188 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|++ .. + . . . ..|+.+.. . .+|.|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4566789999999999999877 7889999853 11 1 0 0 0 13555432 2 289999
Q ss_pred cCCCCCCeEEEEEEEeCCcee---eEEEEEEEecc-CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-C
Q psy10160 189 QANATDSGEYRCVASNSYTSD---ENAVTIRVEGI-FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-L 263 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~---~~~~~l~V~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~ 263 (558)
+++.+|+|.|.|.+.|..+.. ...+.|.|... +.+|.+...+ . ......|.... ..|.+.|. |
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~---~------~~~~~~g~~v~---L~C~~~g~~P 154 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLV---P------GCSDTSGSSVT---LGCLVKGYFP 154 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC---C------CSCCSCSSSEE---EEEEEEEEBS
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcc---c------ccccCCCCcEE---EEEEEEEEeC
Confidence 999999999999999986432 13456777532 1222211100 0 00112222333 45555576 8
Q ss_pred CC-cccccchhhh
Q psy10160 264 PS-YGPHIKRAVE 275 (558)
Q Consensus 264 ~~-~~~w~~~~l~ 275 (558)
.| .+.|++++..
T Consensus 155 ~p~~v~W~~~~~~ 167 (220)
T 1pz5_B 155 EPVTVKWNYGALS 167 (220)
T ss_dssp SCCEEEEGGGTCC
T ss_pred CCeEEEEecCCcc
Confidence 88 9999998753
No 461
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.94 E-value=1.3e-09 Score=101.56 Aligned_cols=128 Identities=16% Similarity=0.270 Sum_probs=79.6
Q ss_pred CCceEeeCCCcEEEEeEeeccCC----CeEEEEEC--CEEe----c-----------cCCceEEEcc-----CCeEEEcc
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPI----PQVFWYKD--GQVI----E-----------NDGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~----p~i~W~~~--g~~l----~-----------~~~~~~~~~~-----~~sL~I~~ 189 (558)
+....+.+|+.++|.|.+.+.|. +.+.|+|. +..+ . ....|+.+.. +.+|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45567899999999999999885 88999984 2211 0 0123555542 25899999
Q ss_pred CCCCCCeEEEEEEEeCCc------e---eeEEEEEEEecc-CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccC
Q psy10160 190 ANATDSGEYRCVASNSYT------S---DENAVTIRVEGI-FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTR 259 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G------~---~~~~~~l~V~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~ 259 (558)
++.+|+|.|.|.+.|..| . ....+.|.|... +.+|.+...+ ... .+.. +......|.+
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~~~-------~~~~---g~~~~l~C~~ 154 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLA--PVC-------GDTT---GSSVTLGCLV 154 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEEC--C------------C---CSEEEEEEEE
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEec--ccc-------cccC---CCCEEEEEEE
Confidence 999999999999999875 1 113367777631 1222221100 000 0112 3334455656
Q ss_pred CCC-CCC-cccccchhhh
Q psy10160 260 AGQ-LPS-YGPHIKRAVE 275 (558)
Q Consensus 260 ~g~-~~~-~~~w~~~~l~ 275 (558)
.|. |.| .+.|++++..
T Consensus 155 ~g~~P~p~~v~W~~~~~~ 172 (228)
T 3bae_H 155 KGYFPEPVTLTWNSGSLS 172 (228)
T ss_dssp EEEBSSCCEEEEGGGTCC
T ss_pred ccEeCCCEEEEEeeCCcc
Confidence 565 667 8999998654
No 462
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=98.93 E-value=4.1e-09 Score=88.01 Aligned_cols=82 Identities=16% Similarity=0.264 Sum_probs=61.2
Q ss_pred CCceEeeCCCcEEEEeEeeccCCC---eEEEEECCEE-----------ecc-----CCceEEEcc------CCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYPIP---QVFWYKDGQV-----------IEN-----DGVHYRITE------SNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P~p---~i~W~~~g~~-----------l~~-----~~~~~~~~~------~~sL~I~~v 190 (558)
+.......|++++|.|.+...+.+ .+.|+|++.. ... -..|..+.. +.+|.|.++
T Consensus 12 ~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v 91 (125)
T 4gos_A 12 TVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNV 91 (125)
T ss_dssp EECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSC
T ss_pred CceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCC
Confidence 345667889999999998755443 5899986521 110 012333322 247999999
Q ss_pred CCCCCeEEEEEEEeCCceeeEEEEEEE
Q psy10160 191 NATDSGEYRCVASNSYTSDENAVTIRV 217 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~~~~~~~l~V 217 (558)
+.+|+|.|.|.+.|..|..+..+.|+|
T Consensus 92 ~~~D~G~Y~C~v~~~~g~~~~~v~LkV 118 (125)
T 4gos_A 92 QLTDAGTYKCYIITSKGKGNANLEYKT 118 (125)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ChHHCEEEEEEEEeCCCeEEEEEEEEE
Confidence 999999999999999999999999998
No 463
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=103.47 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=60.2
Q ss_pred CCceEeeCCCcEEEEeEeecc--CCCeEEEEECC--EEec---c--------CCceEEEccC---CeEEEccCCCCCCeE
Q psy10160 136 LETQVFGVGSDISIPCDVDGY--PIPQVFWYKDG--QVIE---N--------DGVHYRITES---NRLHINQANATDSGE 197 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~--P~p~i~W~~~g--~~l~---~--------~~~~~~~~~~---~sL~I~~v~~~D~G~ 197 (558)
+....+.+|+.++|.|.+.+. |.|.+.|+|.+ .... . ...++.+... .+|.|.+++.+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 445778999999999999987 88899999842 1110 0 1224544332 279999999999999
Q ss_pred EEEEEEeCCcee---eEEEEEEEeccC
Q psy10160 198 YRCVASNSYTSD---ENAVTIRVEGIF 221 (558)
Q Consensus 198 Y~C~a~N~~G~~---~~~~~l~V~~~~ 221 (558)
|.|.+.|..+.. ...+.|.|..++
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~ 115 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSG 115 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC---
T ss_pred EEEEEEECCCCceEECCCEEEEEECCC
Confidence 999999976532 344677776543
No 464
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=98.92 E-value=6.1e-10 Score=89.99 Aligned_cols=86 Identities=13% Similarity=0.281 Sum_probs=61.6
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECCEEeccCCceEEEc-cCCeEEEccCCCCCCeEEEEEEEeCCc
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDGQVIENDGVHYRIT-ESNRLHINQANATDSGEYRCVASNSYT 207 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~a~N~~G 207 (558)
.|.+...+.. .+.+|++|+|.|.+.+. .+.+.|+|+|..+... ++... .+.+|.|.+++.+|+|.|.|.+.|...
T Consensus 5 kP~i~~~p~~-~v~~G~~VtL~C~~~~~-~~~~~w~k~g~~~~~~--~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~~ 80 (105)
T 2vsd_A 5 QPSLSLHPSQ-GVSLGDTVTLRCHLPRM-AAWVQLWLNGTLRFDK--EKDKEQDAAEFSFAVTNLEDAGTYQCRYQVSEP 80 (105)
T ss_dssp CCEEEEESCS-SCCTTCEEEEEEECCSS-CEEEEEEETTEEEEEE--EECTTCSEEEEEEECCSGGGCEEEEEEEEEETT
T ss_pred CCEEEeCCCC-CcCcCCCEEEEEEcCCC-CcEEEEEECCccceee--eccCCCCEEEEEECCCCHHHCeEEEEEEEcCCC
Confidence 4566666665 68899999999999875 4679999999765421 11111 224799999999999999999999642
Q ss_pred ----eeeEEEEEEEe
Q psy10160 208 ----SDENAVTIRVE 218 (558)
Q Consensus 208 ----~~~~~~~l~V~ 218 (558)
..+..+.|.|.
T Consensus 81 ~~~s~~Sdpl~L~V~ 95 (105)
T 2vsd_A 81 LWTSNQSDPVELVLT 95 (105)
T ss_dssp EEECCCCCCEEECCC
T ss_pred CcccCCCCCEEEEEE
Confidence 22445566654
No 465
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.92 E-value=1.5e-09 Score=102.27 Aligned_cols=132 Identities=11% Similarity=0.175 Sum_probs=80.9
Q ss_pred EEecCCceEeeCCCcEEEEeEeecc--CCCeEEEEECC--EE---ec------------c-CCceEEEcc-----CCeEE
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGY--PIPQVFWYKDG--QV---IE------------N-DGVHYRITE-----SNRLH 186 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~--P~p~i~W~~~g--~~---l~------------~-~~~~~~~~~-----~~sL~ 186 (558)
+...+....+.+|+.++|.|.+.+. +.+.+.|+|.. .. +. . ...|+.+.. +.+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4445667788999999999999886 67889999842 11 10 0 224665542 34799
Q ss_pred EccCCCCCCeEEEEEEEeCCc-e------eeEEEEEEEeccCC----CCCCCCCCccccceeEEeceeeecccceeEEEE
Q psy10160 187 INQANATDSGEYRCVASNSYT-S------DENAVTIRVEGIFI----HPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCE 255 (558)
Q Consensus 187 I~~v~~~D~G~Y~C~a~N~~G-~------~~~~~~l~V~~~~~----~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~ 255 (558)
|.+++.+|+|.|.|.+.|..+ . ....+.|.|...+. +|...... .... .+..|.....
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~-------~~~~g~~v~L--- 152 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIA-------ETKLQKAGTY--- 152 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGG-------GGGSSSCEEE---
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChh-------hcccCCCceE---
Confidence 999999999999999998631 1 12345777865322 22211111 0100 0122333444
Q ss_pred eccCCCC-CC-Ccccccchhh
Q psy10160 256 SCTRAGQ-LP-SYGPHIKRAV 274 (558)
Q Consensus 256 ~~~~~g~-~~-~~~~w~~~~l 274 (558)
.|.+.|. |. +.+.|++++.
T Consensus 153 ~C~~~g~~P~~~~v~W~~~~~ 173 (242)
T 1hxm_B 153 LCLLEKFFPDVIKIHWEEKKS 173 (242)
T ss_dssp EEEEEEESSCCEEEEEEESSS
T ss_pred EEEEeeEECCCeEEEEEcCCC
Confidence 4445465 43 6899999875
No 466
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.92 E-value=1.4e-09 Score=101.31 Aligned_cols=129 Identities=15% Similarity=0.171 Sum_probs=78.5
Q ss_pred cCCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---e---cc----------CCceEEEcc-----CCeEEEcc
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---I---EN----------DGVHYRITE-----SNRLHINQ 189 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l---~~----------~~~~~~~~~-----~~sL~I~~ 189 (558)
.+....+.+|+.++|.|.+.+.| .+.+.|+|++ .. + .. -..|+.+.. +.+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 34566789999999999999987 6889999853 21 1 10 023555532 34899999
Q ss_pred CCCCCCeEEEEEEEeCCcee-eEEEEEEEecc-CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC-
Q psy10160 190 ANATDSGEYRCVASNSYTSD-ENAVTIRVEGI-FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS- 265 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~- 265 (558)
++.+|+|.|.|.+.|..+.. ...+.|.|... +.+|.+.... .. ..+..|.... ..|.+.|. |.+
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~---~~------~~~~~g~~v~---L~C~~~g~~P~p~ 153 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLA---PV------CGDTSGSSVT---LGCLVKGYFPEPV 153 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEEC---CC------C------CEE---EEEEEEEEBSSCC
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEec---CC------ccccCCCcEE---EEEEeecEeCCCe
Confidence 99999999999999974322 23457777642 1222211100 00 0112222333 45555564 666
Q ss_pred cccccchhhh
Q psy10160 266 YGPHIKRAVE 275 (558)
Q Consensus 266 ~~~w~~~~l~ 275 (558)
.+.|++++..
T Consensus 154 ~v~W~~~g~~ 163 (227)
T 1mju_H 154 TLTWNSGSLS 163 (227)
T ss_dssp EEEEGGGTBC
T ss_pred EEEEecCCCc
Confidence 8999998754
No 467
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.92 E-value=1.1e-09 Score=104.54 Aligned_cols=91 Identities=16% Similarity=0.273 Sum_probs=65.6
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccC------CCeEEEEEC--CEEe---c--------cCCceEEEcc---CCeEEE
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYP------IPQVFWYKD--GQVI---E--------NDGVHYRITE---SNRLHI 187 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P------~p~i~W~~~--g~~l---~--------~~~~~~~~~~---~~sL~I 187 (558)
+.+...|....+.+|+.++|.|.+.+.| .|.+.|+|+ +..+ . ....|+.+.. ..+|.|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 3445567778899999999999999988 678999984 2211 1 0123555432 238999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 188 NQANATDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
.+++.+|+|.|.|.+.|..+.. ...+.|.|..+
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 9999999999999999986532 23457777654
No 468
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.92 E-value=2.3e-09 Score=99.61 Aligned_cols=127 Identities=15% Similarity=0.215 Sum_probs=78.5
Q ss_pred CceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---ec-------------cCCceEEEcc-----CCeEEEccCC
Q psy10160 137 ETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---IE-------------NDGVHYRITE-----SNRLHINQAN 191 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l~-------------~~~~~~~~~~-----~~sL~I~~v~ 191 (558)
....+.+|+.++|.|.+.+.| .+.+.|+|.. .. +. ....|+.+.. +.+|.|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 467789999999999999876 4789999843 11 10 0123555543 2379999999
Q ss_pred CCCCeEEEEEEEeCCc----e--eeEEEEEEEec-cCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-C
Q psy10160 192 ATDSGEYRCVASNSYT----S--DENAVTIRVEG-IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-L 263 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G----~--~~~~~~l~V~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~ 263 (558)
.+|+|.|.|.+.|..| . ....+.|.|.. ++.+|.+...+ . ...... +......|.+.|. |
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~-------~~~~~~---g~~v~L~C~~~g~~P 155 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLV--S-------CENSNP---SSTVAVGCLAQDFLP 155 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEE--C-------TTCCCS---SSEEEEEEEEEEEBS
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEec--C-------CcccCC---CCcEEEEEEEEEEeC
Confidence 9999999999999763 1 12345778863 22222221100 0 001112 3334455655566 6
Q ss_pred CC-cccccc-hhhh
Q psy10160 264 PS-YGPHIK-RAVE 275 (558)
Q Consensus 264 ~~-~~~w~~-~~l~ 275 (558)
+| .+.|++ ++..
T Consensus 156 ~p~~v~W~~~~g~~ 169 (223)
T 1dee_B 156 DSITFSWKYKNNSD 169 (223)
T ss_dssp SCCEEEEEETTSCB
T ss_pred CCeEEEeEccCCCc
Confidence 66 899999 6544
No 469
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.91 E-value=4.7e-09 Score=88.94 Aligned_cols=87 Identities=18% Similarity=0.365 Sum_probs=64.0
Q ss_pred EecCCceEeeCCCcEEEEeEeec---cCCCeEEEEECCEEe-----cc----------------------C--CceEEEc
Q psy10160 133 NITLETQVFGVGSDISIPCDVDG---YPIPQVFWYKDGQVI-----EN----------------------D--GVHYRIT 180 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g---~P~p~i~W~~~g~~l-----~~----------------------~--~~~~~~~ 180 (558)
...+....+.+|+.++|.|.+.+ .|.+.+.|+|.+... .. . ..|+.+.
T Consensus 8 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~ 87 (135)
T 1xt5_A 8 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 87 (135)
T ss_dssp ECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEES
T ss_pred eCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEe
Confidence 34556778899999999999764 678899999864321 00 0 0344443
Q ss_pred c--CCeEEEccCCCCCCeEEEEEEEeC-----CceeeEEEEEEEec
Q psy10160 181 E--SNRLHINQANATDSGEYRCVASNS-----YTSDENAVTIRVEG 219 (558)
Q Consensus 181 ~--~~sL~I~~v~~~D~G~Y~C~a~N~-----~G~~~~~~~l~V~~ 219 (558)
. +.+|.|.+++.+|+|.|.|.+.|. .|.....+.|.|.+
T Consensus 88 ~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 88 NLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp CTTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred cCCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 3 358999999999999999999995 34556888888865
No 470
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.91 E-value=2.1e-10 Score=105.99 Aligned_cols=68 Identities=12% Similarity=0.331 Sum_probs=46.8
Q ss_pred EeeCCCcEEEEeEeecc-CC-CeEEEEECCEEeccCC---ceEEEc---cCCeEE------EccCCCCCCeEEEEEEEeC
Q psy10160 140 VFGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIENDG---VHYRIT---ESNRLH------INQANATDSGEYRCVASNS 205 (558)
Q Consensus 140 ~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~~~---~~~~~~---~~~sL~------I~~v~~~D~G~Y~C~a~N~ 205 (558)
.+..|+.+.|.|.+.|. |. +.|.|+|+|..+.... ..+... .++++. |.....+|.|.|+|.|.|.
T Consensus 118 ~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~ 197 (214)
T 1ow0_A 118 ELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHE 197 (214)
T ss_dssp TTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECT
T ss_pred HhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECC
Confidence 35679999999999995 54 4899999999876531 112333 455443 3333334589999999997
Q ss_pred Cc
Q psy10160 206 YT 207 (558)
Q Consensus 206 ~G 207 (558)
.-
T Consensus 198 ~l 199 (214)
T 1ow0_A 198 AL 199 (214)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 471
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.91 E-value=1.6e-09 Score=101.74 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=60.0
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--------------CEEecc--CCceEEEcc----CCeEEEccCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--------------GQVIEN--DGVHYRITE----SNRLHINQAN 191 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--------------g~~l~~--~~~~~~~~~----~~sL~I~~v~ 191 (558)
+...+....+.+|+.+.|.|.+.+ |.+.+.|+|. +..... ...++.+.. +.+|.|.+++
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 344566778899999999999987 8889999982 211111 112554432 2379999999
Q ss_pred CCCCeEEEEEEEeCC---ceeeEEEEEEEec
Q psy10160 192 ATDSGEYRCVASNSY---TSDENAVTIRVEG 219 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~---G~~~~~~~l~V~~ 219 (558)
.+|+|.|.|.+.+.. ........|.|..
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 114 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLE 114 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEES
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEec
Confidence 999999999998432 2233445677753
No 472
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.91 E-value=1.6e-09 Score=100.06 Aligned_cols=128 Identities=17% Similarity=0.248 Sum_probs=78.9
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEec---------------cCCceEEEcc-----CCeEEEccCC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVIE---------------NDGVHYRITE-----SNRLHINQAN 191 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l~---------------~~~~~~~~~~-----~~sL~I~~v~ 191 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|+. .... ....|+.+.. +.+|.|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4556788999999999999875 4789999852 2110 0123555542 2389999999
Q ss_pred CCCCeEEEEEEEeCCce---eeEEEEEEEec-cCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC-
Q psy10160 192 ATDSGEYRCVASNSYTS---DENAVTIRVEG-IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS- 265 (558)
Q Consensus 192 ~~D~G~Y~C~a~N~~G~---~~~~~~l~V~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~- 265 (558)
.+|+|.|.|.+.|..+. ....+.|.|.. ++.+|.+...+ ... ....|.... ..|.+.|. |.|
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~--~~~-------~~~~g~~v~---L~C~~~g~~P~p~ 154 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLA--PGC-------GDTTSSTVT---LGCLVKGYFPEPV 154 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEEC--CCS-------SCCCCSSEE---EEEEEEEEBSSCC
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEecc--CCh-------hhccCCcEE---EEEEEeeeEcCCc
Confidence 99999999999997532 22345777763 22223222111 000 012222333 44555565 777
Q ss_pred cccccchhhh
Q psy10160 266 YGPHIKRAVE 275 (558)
Q Consensus 266 ~~~w~~~~l~ 275 (558)
.+.|++++..
T Consensus 155 ~v~W~~~g~~ 164 (215)
T 1c5d_H 155 TVTWNSGALS 164 (215)
T ss_dssp EEEEGGGTTC
T ss_pred EEEEccCCcc
Confidence 8999998653
No 473
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.91 E-value=8e-10 Score=106.54 Aligned_cols=133 Identities=18% Similarity=0.251 Sum_probs=83.2
Q ss_pred cEEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EE---e----------cc---CCceEEEcc----CCeEEE
Q psy10160 130 VKVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QV---I----------EN---DGVHYRITE----SNRLHI 187 (558)
Q Consensus 130 ~~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~---l----------~~---~~~~~~~~~----~~sL~I 187 (558)
+.+...+....+.+|+.++|.|.+.+.|.+.+.|+|++ .. + .. ...|+.+.. +.+|.|
T Consensus 25 ~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (279)
T 2wbj_D 25 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 104 (279)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEE
T ss_pred ceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEE
Confidence 34455677788999999999999999899999999863 11 0 00 123555543 237999
Q ss_pred ccCCCCCCeEEEEEEEeCCc------eeeEEEEEEEeccC---CCCCCCCCCccccceeEEece---eeecccceeEEEE
Q psy10160 188 NQANATDSGEYRCVASNSYT------SDENAVTIRVEGIF---IHPSCRDLPLFANCKLIVEGR---YCQHHYYSQFCCE 255 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G------~~~~~~~l~V~~~~---~~p~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~c~ 255 (558)
.+++.+|+|.|.|.+.|..| .....+.|.|.... .+|.+ .+..+ .+..|.....
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v-----------~~~~~~~~~~~~g~~v~L--- 170 (279)
T 2wbj_D 105 TSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEV-----------AVFEPSEAEISHTQKATL--- 170 (279)
T ss_dssp SSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEE-----------EEEECCHHHHHHHSCCEE---
T ss_pred ccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEE-----------EEECCCcccccCCCceEE---
Confidence 99999999999999999532 11233567776432 12211 11111 0112333444
Q ss_pred eccCCCCCC--Ccccccchhhhh
Q psy10160 256 SCTRAGQLP--SYGPHIKRAVEA 276 (558)
Q Consensus 256 ~~~~~g~~~--~~~~w~~~~l~~ 276 (558)
.|.+.|.++ +.+.|++++...
T Consensus 171 ~C~~~g~~P~~~~v~W~k~g~~l 193 (279)
T 2wbj_D 171 VCLATGFYPDHVELSWWVNGKEV 193 (279)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEC
T ss_pred EEEEeeEcCCCcEEEEEECCEEC
Confidence 444546543 689999987554
No 474
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.90 E-value=5.9e-09 Score=96.04 Aligned_cols=75 Identities=19% Similarity=0.198 Sum_probs=48.1
Q ss_pred CCcEEEEeEe----eccCCC--eEEEEECCEEeccCCceEEEcc---CCeEEEccCCCCCCeEEEEEEEeCCceeeEEEE
Q psy10160 144 GSDISIPCDV----DGYPIP--QVFWYKDGQVIENDGVHYRITE---SNRLHINQANATDSGEYRCVASNSYTSDENAVT 214 (558)
Q Consensus 144 G~~v~L~C~~----~g~P~p--~i~W~~~g~~l~~~~~~~~~~~---~~sL~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 214 (558)
+..+.|.|.. .|.|.+ .+.|.+++...... ..+.... +.+|.|.++...|.|.|+|.|.|..|....+..
T Consensus 126 ~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~-~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~ 204 (215)
T 3mtr_A 126 SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS-KWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAA 204 (215)
T ss_dssp TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEE-EEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCC
T ss_pred cceEEEEEecCCccCCCceEEEEEEEEECCCCcccc-cccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccc
Confidence 4456677752 233444 36788776432110 0111111 268999999999999999999999998876666
Q ss_pred EEEec
Q psy10160 215 IRVEG 219 (558)
Q Consensus 215 l~V~~ 219 (558)
+.|..
T Consensus 205 ~~v~T 209 (215)
T 3mtr_A 205 SEFKT 209 (215)
T ss_dssp EEEEC
T ss_pred eeeEe
Confidence 66643
No 475
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.90 E-value=3.7e-09 Score=97.40 Aligned_cols=84 Identities=18% Similarity=0.391 Sum_probs=58.5
Q ss_pred cCCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---e---c---------cCCceEEEccCC---eEEEccCCC
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---I---E---------NDGVHYRITESN---RLHINQANA 192 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l---~---------~~~~~~~~~~~~---sL~I~~v~~ 192 (558)
.+....+.+|+.++|.|.+.+.+ .+.+.|+|.. .. + . ....|+.+...+ +|.|.+++.
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 34567789999999999998743 6789999732 11 1 0 011244443322 599999999
Q ss_pred CCCeEEEEEEEeCCce----eeEEEEEEEe
Q psy10160 193 TDSGEYRCVASNSYTS----DENAVTIRVE 218 (558)
Q Consensus 193 ~D~G~Y~C~a~N~~G~----~~~~~~l~V~ 218 (558)
+|+|.|.|.+.|..+. ......|.|.
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 9999999999998663 2344567775
No 476
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.90 E-value=3.5e-10 Score=105.82 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=80.4
Q ss_pred EecCCceEeeCCCcEEEEeEeecc-CC-C-eEEEEECCEEe-ccCCceEEEccC------CeEEEccCCCCCCeEEEEEE
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGY-PI-P-QVFWYKDGQVI-ENDGVHYRITES------NRLHINQANATDSGEYRCVA 202 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~-P~-p-~i~W~~~g~~l-~~~~~~~~~~~~------~sL~I~~v~~~D~G~Y~C~a 202 (558)
...+....+.+|+.++|.|.+.|. |. | .+.|+++|..+ ...........+ .+|.|.+++.+|+|.|+|.+
T Consensus 17 ~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~ 96 (231)
T 2w59_A 17 AIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTV 96 (231)
T ss_dssp EECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEE
T ss_pred EeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEE
Confidence 345666667899999999999995 74 6 99999998876 322211112222 36999999999999999999
Q ss_pred EeCCceeeEEEEEEEecc---CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCCCC--Ccccccchhhhhh
Q psy10160 203 SNSYTSDENAVTIRVEGI---FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQLP--SYGPHIKRAVEAE 277 (558)
Q Consensus 203 ~N~~G~~~~~~~l~V~~~---~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~~~--~~~~w~~~~l~~~ 277 (558)
.|..+.... .+.|... ..+|... +..+..... .+......|.+.|.++ +.+.|++++..+.
T Consensus 97 ~~~~~~~~~--~~~v~~~~~~~~~P~v~-----------v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 162 (231)
T 2w59_A 97 QHEELPLPL--SKSVYRNTGPTTPPLIY-----------PFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVP 162 (231)
T ss_dssp ECTTCSSCE--EEEECCCCSCCBCCEEE-----------EECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EcCCCCCce--EEEEecCCCCCcCCEEE-----------EeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECC
Confidence 998865433 3334211 1122111 111000000 0112445666667543 6799999976654
Q ss_pred h
Q psy10160 278 A 278 (558)
Q Consensus 278 ~ 278 (558)
.
T Consensus 163 ~ 163 (231)
T 2w59_A 163 A 163 (231)
T ss_dssp G
T ss_pred C
Confidence 3
No 477
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.89 E-value=1.8e-09 Score=103.51 Aligned_cols=88 Identities=24% Similarity=0.336 Sum_probs=60.5
Q ss_pred EEEecCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEEec----c-CC---------c-eEEEcc----CCeEEEcc
Q psy10160 131 KVNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQVIE----N-DG---------V-HYRITE----SNRLHINQ 189 (558)
Q Consensus 131 ~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~l~----~-~~---------~-~~~~~~----~~sL~I~~ 189 (558)
.+...+....+.+|+.++|.|.+.+ |.+.+.|+|. +.... . ++ . ++.+.. +.+|.|.+
T Consensus 29 ~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 107 (270)
T 3qib_D 29 KVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQS 107 (270)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESS
T ss_pred eEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECC
Confidence 3445566788899999999999876 7789999982 21100 0 00 0 444432 34799999
Q ss_pred CCCCCCeEEEEEEEeCCc----eeeEEEEEEEec
Q psy10160 190 ANATDSGEYRCVASNSYT----SDENAVTIRVEG 219 (558)
Q Consensus 190 v~~~D~G~Y~C~a~N~~G----~~~~~~~l~V~~ 219 (558)
++.+|+|.|.|.+.|..+ .....+.|.|..
T Consensus 108 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 108 SEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp CCGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred CCHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 999999999999997432 223445677764
No 478
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.89 E-value=2.9e-09 Score=101.48 Aligned_cols=128 Identities=14% Similarity=0.159 Sum_probs=79.3
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEe------cc----------CCceEEEcc-----CCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVI------EN----------DGVHYRITE-----SNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l------~~----------~~~~~~~~~-----~~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|+. ..+ .. ...|+.+.. +.+|.|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 4567789999999999999987 6889999863 211 00 023555543 247999999
Q ss_pred CCCCCeEEEEEEEeCCce---eeEEEEEEEecc-CCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CCC
Q psy10160 191 NATDSGEYRCVASNSYTS---DENAVTIRVEGI-FIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LPS 265 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~---~~~~~~l~V~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~~ 265 (558)
+.+|+|.|.|.+.|..+. ....+.|.|... ..+|.+...+ .. ..+.. +....+.|.+.+. |++
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~--p~-------~~v~~---g~~v~L~C~~~g~~P~~ 160 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLA--PV-------CGDTT---GSSVTLGCLVKGYFPEP 160 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEEC--CC-------CC--C---CSEEEEEEEEEEEBSSC
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeC--CC-------ccccC---CCcEEEEEEEEeEeCCC
Confidence 999999999999997531 123457777642 2222221100 00 01112 2333355555554 666
Q ss_pred -cccccchhhh
Q psy10160 266 -YGPHIKRAVE 275 (558)
Q Consensus 266 -~~~w~~~~l~ 275 (558)
.+.|++++..
T Consensus 161 i~v~W~k~g~~ 171 (261)
T 2xqy_G 161 VTLTWNSGSLS 171 (261)
T ss_dssp CEEEEGGGTCC
T ss_pred CEEEEecCCCc
Confidence 8999998754
No 479
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.89 E-value=1.2e-08 Score=94.37 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=80.2
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EE---ec-------------cCCceEEEccC-----CeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QV---IE-------------NDGVHYRITES-----NRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~---l~-------------~~~~~~~~~~~-----~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|.. .. +. ....|+.+..+ .+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3457789999999999999876 6789999842 11 10 01236655432 37999999
Q ss_pred CCCCCeEEEEEEEeCCce---eeEEEEEEEeccC-CCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCCC-CC-
Q psy10160 191 NATDSGEYRCVASNSYTS---DENAVTIRVEGIF-IHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAGQ-LP- 264 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~---~~~~~~l~V~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g~-~~- 264 (558)
+.+|+|.|.|.+.|..+. ....+.|.|...+ .+|.+...+ ...+..|..... .|.+.+. |.
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~----------~~~~~~g~~v~L---~C~~~g~~P~~ 153 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT----------LPPALSSDPVII---GCLIHDYFPSG 153 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC----------CCSSSCCSSEEE---EEEEEEEBSCC
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee----------cccccCCCcEEE---EEEEEeEECCC
Confidence 999999999999998653 2234577786432 222211111 001122333444 4444455 54
Q ss_pred -Ccccccchhhhh
Q psy10160 265 -SYGPHIKRAVEA 276 (558)
Q Consensus 265 -~~~~w~~~~l~~ 276 (558)
+.+.|++++...
T Consensus 154 ~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 154 TMNVTWGKSGKDI 166 (220)
T ss_dssp CEEEEESCCCSSC
T ss_pred cEEEEEecCCEec
Confidence 689999987543
No 480
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.87 E-value=3.1e-09 Score=99.82 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=85.9
Q ss_pred cCceeEEeccCCC---CCC-cEEEEeCCcccCCCCc-----eeecccc---cee---------eceeEEeeccceee--E
Q psy10160 63 YGTILSSAFPSES---ASP-VVTQTTTTTTEATSPH-----VYAALTH---CVP---------WSNVCLFGARSGYL--K 119 (558)
Q Consensus 63 ~~~~~~~~~~~~~---p~p-~v~W~~~~~~~~~~~~-----~~~g~~~---~~~---------~~~~~~~~~~~~~~--~ 119 (558)
++.+.+.|...+. |.| .|.|++++..+..... ...+.|. .+. -.|.|.+.+..+.. .
T Consensus 32 G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~ 111 (239)
T 1i1c_A 32 GLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPAPIE 111 (239)
T ss_dssp SSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSSCEE
T ss_pred CCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCCCcE
Confidence 4466788888776 766 8999998865542210 0001110 111 13466666654421 1
Q ss_pred Eeee--ceeeeCcEEEecCCceEeeCCCcEEEEeEeecc-CC-CeEEEEECCEEeccCC-ceEEEccCCe------EEEc
Q psy10160 120 ETQN--GGYLVPVKVNITLETQVFGVGSDISIPCDVDGY-PI-PQVFWYKDGQVIENDG-VHYRITESNR------LHIN 188 (558)
Q Consensus 120 ~~~~--~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~-P~-p~i~W~~~g~~l~~~~-~~~~~~~~~s------L~I~ 188 (558)
.... ..+..+|.+.+.+.......|+.+.|.|.+.|. |. +.+.|+|+|..+.... .++....+++ |.|.
T Consensus 112 ~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~ 191 (239)
T 1i1c_A 112 KSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVK 191 (239)
T ss_dssp EEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEE
T ss_pred EEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEC
Confidence 1111 134456776655544333458899999999994 54 3799999999875321 1122234443 4444
Q ss_pred cCCCCCCeEEEEEEEeCCcee
Q psy10160 189 QANATDSGEYRCVASNSYTSD 209 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~G~~ 209 (558)
....+|.|.|+|.|.|.....
T Consensus 192 ~~~~~~~g~YtC~v~n~~l~~ 212 (239)
T 1i1c_A 192 KETWQQGNTFTCSVLHEGLEN 212 (239)
T ss_dssp HHHHHTTCCEEEEEECTTSGG
T ss_pred hhhcCCCCEEEEEEECCCCCC
Confidence 444457999999999987543
No 481
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.87 E-value=2.8e-09 Score=101.04 Aligned_cols=85 Identities=15% Similarity=0.240 Sum_probs=59.8
Q ss_pred cCCceEeeCCCcEEEEeEeeccCCCeEEEEEC--CEE---e-ccC----------Cc-eEEEccCCe--EEEccCCCCCC
Q psy10160 135 TLETQVFGVGSDISIPCDVDGYPIPQVFWYKD--GQV---I-END----------GV-HYRITESNR--LHINQANATDS 195 (558)
Q Consensus 135 ~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~--g~~---l-~~~----------~~-~~~~~~~~s--L~I~~v~~~D~ 195 (558)
.+....+.+|+.++|.|.+.+.|.+.+.|+|. +.. + ... .. |+.+..++. |.|.+++.+|+
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~L~I~~v~~~Ds 86 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTELRLQVANMSQG 86 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSCCEEEEESCSSC
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCeEEEccCChhhC
Confidence 45567789999999999999999999999982 111 0 000 01 555544333 99999999999
Q ss_pred eEEEEEEEeCCc------eeeEEEEEEEec
Q psy10160 196 GEYRCVASNSYT------SDENAVTIRVEG 219 (558)
Q Consensus 196 G~Y~C~a~N~~G------~~~~~~~l~V~~ 219 (558)
|.|.|.+.|..+ .......|.|..
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~ 116 (253)
T 3to4_D 87 RTLYCTSSADHWTNTGQLYFGEGSKLTVLE 116 (253)
T ss_dssp EEEEEEEECSCCSTTCCEEECCCEEEEEES
T ss_pred eEEEEEEecCCCCcccceEECCCEEEEEec
Confidence 999999998754 112334666653
No 482
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.86 E-value=2.6e-09 Score=101.52 Aligned_cols=128 Identities=14% Similarity=0.196 Sum_probs=78.2
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEec----------------cCCceEEEcc-----CCeEEEccC
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVIE----------------NDGVHYRITE-----SNRLHINQA 190 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l~----------------~~~~~~~~~~-----~~sL~I~~v 190 (558)
+....+.+|+.++|.|.+.+.| .+.+.|+|.. ..+. ....|+.+.. +.+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 3456788999999999999876 6789999853 1110 0123555442 237999999
Q ss_pred CCCCCeEEEEEEEeCCce-------------eeEEEEEEEec-cCCCCCCCCCCccccceeEEeceeeecccceeEEEEe
Q psy10160 191 NATDSGEYRCVASNSYTS-------------DENAVTIRVEG-IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCES 256 (558)
Q Consensus 191 ~~~D~G~Y~C~a~N~~G~-------------~~~~~~l~V~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~ 256 (558)
+.+|+|.|.|.+.|..|. ....+.|.|.. ++.+|.+...+ .... .. . +......
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~--p~~~-~~------~---g~~v~L~ 154 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLA--PSSK-ST------S---GGTAALG 154 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCC--C---------------------CC
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEec--Cccc-cc------C---CCcEEEE
Confidence 999999999999998651 11335778865 22233322111 0001 11 1 3334456
Q ss_pred ccCCCC-CCC-cccccchhhh
Q psy10160 257 CTRAGQ-LPS-YGPHIKRAVE 275 (558)
Q Consensus 257 ~~~~g~-~~~-~~~w~~~~l~ 275 (558)
|.+.|. |+| .+.|++++..
T Consensus 155 C~~~g~~P~pi~v~W~k~g~~ 175 (257)
T 3bn9_D 155 CLVKDYFPEPVTVSWNSGALT 175 (257)
T ss_dssp CEEEEEBSSCCEEEETTTTCC
T ss_pred EEEeeEECCCcEEEEeeCCCc
Confidence 766665 666 8999998754
No 483
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.84 E-value=2.8e-09 Score=102.00 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=62.8
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC-----CCeEEEEECC--EE---ec--------cCCceEEEcc---CCeEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP-----IPQVFWYKDG--QV---IE--------NDGVHYRITE---SNRLHI 187 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P-----~p~i~W~~~g--~~---l~--------~~~~~~~~~~---~~sL~I 187 (558)
.+.+...+....+.+|+.++|.|.+.+.| .+.+.|+|.. .. +. ....++.+.. ..+|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 34455566777889999999999999987 5889999853 21 11 0123555432 237999
Q ss_pred ccCCCCCCeEEEEEEEeCCcee-eEEEEEEEecc
Q psy10160 188 NQANATDSGEYRCVASNSYTSD-ENAVTIRVEGI 220 (558)
Q Consensus 188 ~~v~~~D~G~Y~C~a~N~~G~~-~~~~~l~V~~~ 220 (558)
.+++.+|+|.|.|.+.|..+.. .....|.|...
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 128 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSS 128 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC----
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccC
Confidence 9999999999999999986532 23456666543
No 484
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.84 E-value=3.9e-09 Score=96.70 Aligned_cols=68 Identities=19% Similarity=0.322 Sum_probs=48.0
Q ss_pred eCCCcEEEEeEeeccCC--C--eEEEEECCEEeccCC-ceEEEccCCeEEEcc---CCCC---CCeEEEEEEEeCCcee
Q psy10160 142 GVGSDISIPCDVDGYPI--P--QVFWYKDGQVIENDG-VHYRITESNRLHINQ---ANAT---DSGEYRCVASNSYTSD 209 (558)
Q Consensus 142 ~~G~~v~L~C~~~g~P~--p--~i~W~~~g~~l~~~~-~~~~~~~~~sL~I~~---v~~~---D~G~Y~C~a~N~~G~~ 209 (558)
.+|+.+.|.|.+.|.|+ | .|.|+|++..+.... .......++.+.+.. +... |+|.|+|.|.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCc
Confidence 78999999999999863 3 899999998775421 011223345554432 3344 4999999999998865
No 485
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.84 E-value=1.3e-08 Score=82.78 Aligned_cols=84 Identities=18% Similarity=0.190 Sum_probs=62.6
Q ss_pred CCceEeeCCCcEEEEeEe-eccCCCeEEEEECC-EEec----------c---CCceEEEc-cCCeEEEccCCCCCCeEEE
Q psy10160 136 LETQVFGVGSDISIPCDV-DGYPIPQVFWYKDG-QVIE----------N---DGVHYRIT-ESNRLHINQANATDSGEYR 199 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g-~~l~----------~---~~~~~~~~-~~~sL~I~~v~~~D~G~Y~ 199 (558)
.....+.+|+.++|.|.. .+.|.+.+.|++.. ..+. . -..|+.+. .+.+|.|.+++.+|+|.|.
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~ 89 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKGTYY 89 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCEEEE
T ss_pred CCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCeEEE
Confidence 345678899999999998 77888899999942 2121 0 01356554 4568999999999999999
Q ss_pred EEEEeCCceeeEEEEEEEecc
Q psy10160 200 CVASNSYTSDENAVTIRVEGI 220 (558)
Q Consensus 200 C~a~N~~G~~~~~~~l~V~~~ 220 (558)
|.+.+.. .....+.|.|.+|
T Consensus 90 C~v~~~~-~~~~~~~L~V~dp 109 (110)
T 2ptt_A 90 MRVLRET-ENELKITLEVFDP 109 (110)
T ss_dssp EEEESSS-BCCEEEEEEEECC
T ss_pred EEEEcCC-CcEEEEEEEEEcc
Confidence 9998876 4456778888543
No 486
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.83 E-value=6.6e-09 Score=85.10 Aligned_cols=74 Identities=22% Similarity=0.405 Sum_probs=55.0
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EEe---------ccCCceEEEccCC------eEEEccCCCCCC
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QVI---------ENDGVHYRITESN------RLHINQANATDS 195 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~l---------~~~~~~~~~~~~~------sL~I~~v~~~D~ 195 (558)
...|....+.+|+.++|.|.+.+.+ +.+.|+|.. ..+ .....++.+..+. +|.|.+++.+|+
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~Ds 83 (113)
T 1h5b_A 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLEDS 83 (113)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGGC
T ss_pred EECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhhC
Confidence 3446677889999999999998865 789999853 111 0112345543322 799999999999
Q ss_pred eEEEEEEEeCCc
Q psy10160 196 GEYRCVASNSYT 207 (558)
Q Consensus 196 G~Y~C~a~N~~G 207 (558)
|.|.|.+.|..|
T Consensus 84 G~Y~C~~~n~~~ 95 (113)
T 1h5b_A 84 GTYFCAAEASSG 95 (113)
T ss_dssp EEEEEEEECSSS
T ss_pred EEEEEEEecCCC
Confidence 999999999865
No 487
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.83 E-value=8.7e-09 Score=103.80 Aligned_cols=79 Identities=14% Similarity=0.215 Sum_probs=53.5
Q ss_pred CcEEEecCCceEeeCCCcEEEEeEeeccC--CCeEEEEECCEEeccCC-ceEEEccCC------eEEEccCCCCCCeEEE
Q psy10160 129 PVKVNITLETQVFGVGSDISIPCDVDGYP--IPQVFWYKDGQVIENDG-VHYRITESN------RLHINQANATDSGEYR 199 (558)
Q Consensus 129 p~~~~~~~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g~~l~~~~-~~~~~~~~~------sL~I~~v~~~D~G~Y~ 199 (558)
+|.+.+.+.......|+.++|.|.+.|.+ .+.|.|+|+|..+.... .......++ .|.|.....+|.|.|+
T Consensus 274 ~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~Yt 353 (376)
T 2aty_A 274 APQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFT 353 (376)
T ss_pred CCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEE
Confidence 44444444444445689999999999963 45799999998874321 011112232 4777777778899999
Q ss_pred EEEEeCCc
Q psy10160 200 CVASNSYT 207 (558)
Q Consensus 200 C~a~N~~G 207 (558)
|.|.|..-
T Consensus 354 C~v~h~~l 361 (376)
T 2aty_A 354 CSVLHEGL 361 (376)
T ss_pred EEEEeCCC
Confidence 99999653
No 488
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.83 E-value=5.1e-09 Score=86.76 Aligned_cols=88 Identities=17% Similarity=0.262 Sum_probs=61.1
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EE---e-cc-------CCceEEEcc---CCeEEEccCCCCCCe
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QV---I-EN-------DGVHYRITE---SNRLHINQANATDSG 196 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~---l-~~-------~~~~~~~~~---~~sL~I~~v~~~D~G 196 (558)
...|....+.+|+.++|.|.+.+.|.+.+.|+|.. .. + .. ...|+.+.. ..+|.|.+++.+|+|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG 84 (120)
T 1mqk_L 5 TQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPEDFG 84 (120)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHHCE
Confidence 34466778899999999999999888899999843 21 1 10 123555432 247999999999999
Q ss_pred EEEEEEEeCC-c-eeeEEEEEEEecc
Q psy10160 197 EYRCVASNSY-T-SDENAVTIRVEGI 220 (558)
Q Consensus 197 ~Y~C~a~N~~-G-~~~~~~~l~V~~~ 220 (558)
.|.|.+.|.. . .......|.|.+.
T Consensus 85 ~Y~C~~~~~~~~~~fg~gt~L~V~~~ 110 (120)
T 1mqk_L 85 SYYCQHHYGTPPLTFGGGTKLEIKRE 110 (120)
T ss_dssp EEEEEECSSSSSCCBCCCEEEEEC--
T ss_pred EEEEEEEeCCCceEECCCeEEEEecC
Confidence 9999999864 2 1123446666543
No 489
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=1.7e-08 Score=85.71 Aligned_cols=94 Identities=17% Similarity=0.344 Sum_probs=64.5
Q ss_pred EEecCCceEeeCCCcEEEEeEeecc-CCCeEEEEECCE----EeccC-C---ceEEEc--------cCCeEEEccCCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGY-PIPQVFWYKDGQ----VIEND-G---VHYRIT--------ESNRLHINQANATD 194 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~-P~p~i~W~~~g~----~l~~~-~---~~~~~~--------~~~sL~I~~v~~~D 194 (558)
+...+....+.+|+.++|.|.+.+. |.+.+.|+|.+. .+... + .++... .+.+|.|.+++.+|
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D 90 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPAD 90 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTTT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHHH
Confidence 3344567788999999999999876 667899999752 11111 1 122211 13479999999999
Q ss_pred CeEEEEEEEeCCc--eee----EEEEEEEeccCCCCC
Q psy10160 195 SGEYRCVASNSYT--SDE----NAVTIRVEGIFIHPS 225 (558)
Q Consensus 195 ~G~Y~C~a~N~~G--~~~----~~~~l~V~~~~~~p~ 225 (558)
+|.|.|.+.|..+ ... ..+.|.|.+++..|.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s~P~ 127 (136)
T 2d9c_A 91 AGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAPV 127 (136)
T ss_dssp CEEEEEEEEECCSSSCEEEEECCCEEEEEECCCCCCC
T ss_pred CEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCCCCc
Confidence 9999999998653 111 457888876654443
No 490
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.83 E-value=7.2e-09 Score=99.73 Aligned_cols=156 Identities=10% Similarity=0.143 Sum_probs=66.9
Q ss_pred eeEEeeccceeeEEeeeceee-eCcEEEecCCceEeeCCCcEEEEeEeeccCC-C--eEEEEECCEEeccCCceEEEccC
Q psy10160 107 NVCLFGARSGYLKETQNGGYL-VPVKVNITLETQVFGVGSDISIPCDVDGYPI-P--QVFWYKDGQVIENDGVHYRITES 182 (558)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~v~~G~~v~L~C~~~g~P~-p--~i~W~~~g~~l~~~~~~~~~~~~ 182 (558)
+.|.+..............+. .|..+.+.+....+.+|+.++|.|.+.|.++ + .|.|+|++..+.... ......+
T Consensus 63 y~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~-~~~~~~~ 141 (291)
T 1mq8_A 63 PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP-AVGEPAE 141 (291)
T ss_dssp CEEEEECSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEE-CCBTTEE
T ss_pred EEEEEEcCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeeccc-CCCCCce
Confidence 556655443223222233332 3445555555556889999999999988544 3 589999998875321 0000112
Q ss_pred CeEEEccCCCCCCeEEEEEEEeCCce--------eeEEEEEEEeccCCCCCCCCCCccccceeEEeceeeecccceeEEE
Q psy10160 183 NRLHINQANATDSGEYRCVASNSYTS--------DENAVTIRVEGIFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCC 254 (558)
Q Consensus 183 ~sL~I~~v~~~D~G~Y~C~a~N~~G~--------~~~~~~l~V~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c 254 (558)
.+|.+.....+|.+.|+|+|.|..+. .+....|.|..+|........+ ..+. .+..+.
T Consensus 142 ~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p-----~~l~---------eG~~v~ 207 (291)
T 1mq8_A 142 VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSP-----RVLE---------VDTQGT 207 (291)
T ss_dssp EEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------
T ss_pred EEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCC-----cCcc---------CCCeEE
Confidence 35666656666667999999998663 2455677775443211111111 1111 245555
Q ss_pred EeccCCCCCCC---cccccchhhhhh
Q psy10160 255 ESCTRAGQLPS---YGPHIKRAVEAE 277 (558)
Q Consensus 255 ~~~~~~g~~~~---~~~w~~~~l~~~ 277 (558)
.+|.+.|.+|+ .+.|.+++....
T Consensus 208 l~C~~~g~~P~~~~~v~w~~~g~~l~ 233 (291)
T 1mq8_A 208 VVCSLDGLFPVSEAQVHLALGDQRLN 233 (291)
T ss_dssp --------------------------
T ss_pred EEEEcCCCCCCcccEEEEEECCEecC
Confidence 77888787665 488988865543
No 491
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.82 E-value=3.9e-09 Score=99.03 Aligned_cols=129 Identities=12% Similarity=0.194 Sum_probs=79.1
Q ss_pred ecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--EE---ec-----------cCCceEEEcc----CCeEEEccCCCC
Q psy10160 134 ITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--QV---IE-----------NDGVHYRITE----SNRLHINQANAT 193 (558)
Q Consensus 134 ~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~~---l~-----------~~~~~~~~~~----~~sL~I~~v~~~ 193 (558)
..+....+.+|+.++|.|.+. .+.+.+.|+|++ .. +. ....|+.+.. +.+|.|.+++.+
T Consensus 4 q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~ 82 (238)
T 1bec_A 4 QSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPS 82 (238)
T ss_dssp EECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGG
T ss_pred cCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcc
Confidence 456677889999999999985 468899999853 11 10 0123454432 237999999999
Q ss_pred CCeEEEEEEEeCCc---e--eeEEEEEEEeccC---CCCCCCCCCccccceeEEece---eeecccceeEEEEeccCCCC
Q psy10160 194 DSGEYRCVASNSYT---S--DENAVTIRVEGIF---IHPSCRDLPLFANCKLIVEGR---YCQHHYYSQFCCESCTRAGQ 262 (558)
Q Consensus 194 D~G~Y~C~a~N~~G---~--~~~~~~l~V~~~~---~~p~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~c~~~~~~g~ 262 (558)
|+|.|.|.+.|..+ . ......|.|.... .+|.+. +..+ .+..|......|. +.|.
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~-----------~~~~~~~~~~~g~~~~L~C~---~~g~ 148 (238)
T 1bec_A 83 QTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVS-----------LFEPSKAEIANKQKATLVCL---ARGF 148 (238)
T ss_dssp GCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEE-----------EECCCSTTCSSSCSCSEEEE---EEEE
T ss_pred cCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceE-----------EECCChHHcccCCceEEEEE---EeeE
Confidence 99999999999752 1 1233467776432 122211 1111 1122334444444 4465
Q ss_pred -CCC-cccccchhhhhh
Q psy10160 263 -LPS-YGPHIKRAVEAE 277 (558)
Q Consensus 263 -~~~-~~~w~~~~l~~~ 277 (558)
|++ .+.|++++....
T Consensus 149 ~P~~~~v~W~~~g~~~~ 165 (238)
T 1bec_A 149 FPDHVELSWWVNGKEVH 165 (238)
T ss_dssp BSCCEEEEEEETTEEEC
T ss_pred eCCCcEEEEEECCEECC
Confidence 544 899999876543
No 492
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.82 E-value=1.2e-09 Score=102.78 Aligned_cols=78 Identities=14% Similarity=0.243 Sum_probs=57.9
Q ss_pred cEEEecCCceE-eeCCCcEEEEeEeecc---CCC-eEEEEECCEEeccC---------CceEEEccCCeEEEccCCCCCC
Q psy10160 130 VKVNITLETQV-FGVGSDISIPCDVDGY---PIP-QVFWYKDGQVIEND---------GVHYRITESNRLHINQANATDS 195 (558)
Q Consensus 130 ~~~~~~~~~~~-v~~G~~v~L~C~~~g~---P~p-~i~W~~~g~~l~~~---------~~~~~~~~~~sL~I~~v~~~D~ 195 (558)
..+..++.... +.+|+.++|.|.+.|. |.| .|.|+|++..+... +.+|. ...+|.|.+++.+|+
T Consensus 17 ~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~--~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 17 SVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLR--SVSELPIVERDWLNG 94 (239)
T ss_dssp CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEE--EEEEEECCHHHHHTT
T ss_pred EEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEE--EEEEEEEEhhHccCC
Confidence 33334444433 7899999999999987 877 89999998765421 11221 124799999999999
Q ss_pred eEEEEEEEeCCcee
Q psy10160 196 GEYRCVASNSYTSD 209 (558)
Q Consensus 196 G~Y~C~a~N~~G~~ 209 (558)
|.|+|.+.|..|..
T Consensus 95 g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 95 KTFKCKVNSGAFPA 108 (239)
T ss_dssp CCEEEEEECSSSSS
T ss_pred CeEEEEEecccCCC
Confidence 99999999998865
No 493
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.80 E-value=6.1e-09 Score=86.42 Aligned_cols=90 Identities=16% Similarity=0.131 Sum_probs=65.1
Q ss_pred CceEeeCCCcEEEEeEe-eccCCCeEEEEECCE-Eec---------c---CCceEEEc-cCCeEEEccCCCCCCeEEEEE
Q psy10160 137 ETQVFGVGSDISIPCDV-DGYPIPQVFWYKDGQ-VIE---------N---DGVHYRIT-ESNRLHINQANATDSGEYRCV 201 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~-~g~P~p~i~W~~~g~-~l~---------~---~~~~~~~~-~~~sL~I~~v~~~D~G~Y~C~ 201 (558)
.+..+.+|++|+|.|.. ...+.+.+.|+++.. .+. . -..|+.+. .+++|.|.+++.+|+|.|.|.
T Consensus 12 ~pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~c~ 91 (121)
T 2edo_A 12 VHMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMR 91 (121)
T ss_dssp BCCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEEEE
T ss_pred EEEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEEEE
Confidence 34678899999999987 444456799998652 111 0 01244555 567999999999999999999
Q ss_pred EEeCCce-eeEEEEEEEeccCCCCCC
Q psy10160 202 ASNSYTS-DENAVTIRVEGIFIHPSC 226 (558)
Q Consensus 202 a~N~~G~-~~~~~~l~V~~~~~~p~~ 226 (558)
+.|..+. ....+.|.|.++...|.+
T Consensus 92 v~~~~~~~~~~~~~L~V~~~~~~P~I 117 (121)
T 2edo_A 92 VLKKTGNEQEWKIKLQVLDPVPKPVI 117 (121)
T ss_dssp EEETTTEEEECCEECEEECCSCCCCC
T ss_pred EEcCCCcEEEEEEEEEEECCCCCCEE
Confidence 9987654 457788999776544443
No 494
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.80 E-value=9.1e-09 Score=95.22 Aligned_cols=128 Identities=14% Similarity=0.200 Sum_probs=76.8
Q ss_pred CCceEeeCCCcEEEEeEeeccC--CCeEEEEECC--EEe------cc------------CCceEEEccCC-----eEEEc
Q psy10160 136 LETQVFGVGSDISIPCDVDGYP--IPQVFWYKDG--QVI------EN------------DGVHYRITESN-----RLHIN 188 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g~P--~p~i~W~~~g--~~l------~~------------~~~~~~~~~~~-----sL~I~ 188 (558)
+....+.+|+.++|.|.+.+.+ .+.+.|+|.. ... .. ...|+.+..++ +|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 86 (221)
T 3m8o_H 7 SGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMN 86 (221)
T ss_dssp ESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEEC
Confidence 3456788999999999999854 6789999732 111 00 11355554322 69999
Q ss_pred cCCCCCCeEEEEEEEeCC--ceeeEEEEEEEec-cCCCCCCCCCCccccceeEEeceeeecccceeEEEEeccCCC-CCC
Q psy10160 189 QANATDSGEYRCVASNSY--TSDENAVTIRVEG-IFIHPSCRDLPLFANCKLIVEGRYCQHHYYSQFCCESCTRAG-QLP 264 (558)
Q Consensus 189 ~v~~~D~G~Y~C~a~N~~--G~~~~~~~l~V~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~g~~~~~~c~~~~~~g-~~~ 264 (558)
+++.+|+|.|.|.+.|.. ........|.|.. +..+|.+... ..... .. +......|.+.+ .|+
T Consensus 87 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~---------~~~~~-~~---g~~v~L~C~~~~~~P~ 153 (221)
T 3m8o_H 87 SLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPL---------SLCST-QP---DGNVVIACLVQGFFPQ 153 (221)
T ss_dssp SCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEE---------ECCSC-CC---TTEEEEEEEEEEEBSS
T ss_pred CCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEe---------cCccc-cc---CCCEEEEEEEEeeECC
Confidence 999999999999999974 2233445677752 2222221100 00000 12 233334555555 554
Q ss_pred --Ccccccchhhhh
Q psy10160 265 --SYGPHIKRAVEA 276 (558)
Q Consensus 265 --~~~~w~~~~l~~ 276 (558)
+.+.|++++...
T Consensus 154 ~~~~v~W~~~g~~~ 167 (221)
T 3m8o_H 154 EPLSVTWSESGQGV 167 (221)
T ss_dssp CSEEEEESCCSTTC
T ss_pred CCEEEEEEECCEEC
Confidence 379999987654
No 495
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=98.80 E-value=4.7e-08 Score=74.81 Aligned_cols=83 Identities=22% Similarity=0.354 Sum_probs=63.4
Q ss_pred CceEeeCCCcEEEEeEeec-cCCCeEEEEECC----EEeccCCceEEEccCC---eEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 137 ETQVFGVGSDISIPCDVDG-YPIPQVFWYKDG----QVIENDGVHYRITESN---RLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 137 ~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g----~~l~~~~~~~~~~~~~---sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+...+..|+++.|.|.+.+ .+.|.++|-|-+ .+++..........+- .|.|.+|-.+|+|.|.|.|.+..|.
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~sg~ 98 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQSNL 98 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCCCc
Confidence 3556789999999999999 699999999855 4554422111222221 5899999999999999999999998
Q ss_pred e-eEEEEEEEec
Q psy10160 209 D-ENAVTIRVEG 219 (558)
Q Consensus 209 ~-~~~~~l~V~~ 219 (558)
. +.++.+.|.+
T Consensus 99 ieSHsvtI~Vt~ 110 (120)
T 2aw2_A 99 IESHSTTLYVTD 110 (120)
T ss_dssp EECCCEEEEEEC
T ss_pred EEeeEEEEEEEe
Confidence 7 4777888864
No 496
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.80 E-value=1.3e-08 Score=83.60 Aligned_cols=83 Identities=19% Similarity=0.293 Sum_probs=59.4
Q ss_pred CCceEeeCCCcEEEEeEeec-cCCCeEEEEECCEE--------ec--------cCCceEEEcc-----CCeEEEccCCCC
Q psy10160 136 LETQVFGVGSDISIPCDVDG-YPIPQVFWYKDGQV--------IE--------NDGVHYRITE-----SNRLHINQANAT 193 (558)
Q Consensus 136 ~~~~~v~~G~~v~L~C~~~g-~P~p~i~W~~~g~~--------l~--------~~~~~~~~~~-----~~sL~I~~v~~~ 193 (558)
+....+.+|+.++|.|...+ .+.+.+.|+|.... +. ....++.+.. +.+|.|.+++.+
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 83 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVES 83 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGG
T ss_pred cceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCcc
Confidence 45667889999999999876 34567999997521 10 1123455422 247999999999
Q ss_pred CCeEEEEEEEeCCcee--eEEEEEEEe
Q psy10160 194 DSGEYRCVASNSYTSD--ENAVTIRVE 218 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~--~~~~~l~V~ 218 (558)
|+|.|.|.+.|..+.. ...+.|.|.
T Consensus 84 DsG~Y~C~v~~~~~~~~~~~~~~l~V~ 110 (116)
T 2or8_A 84 DSGLYCCRVEIPGWFNDQKVTFSLQVK 110 (116)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEEEEE
T ss_pred cCEEEEEEEEcCCcccccEEEEEEEEC
Confidence 9999999999976544 566677764
No 497
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.79 E-value=1.6e-08 Score=82.13 Aligned_cols=74 Identities=14% Similarity=0.288 Sum_probs=55.9
Q ss_pred EEecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E---Eec--------cCCceEEEcc---CCeEEEccCCCCCC
Q psy10160 132 VNITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q---VIE--------NDGVHYRITE---SNRLHINQANATDS 195 (558)
Q Consensus 132 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~---~l~--------~~~~~~~~~~---~~sL~I~~v~~~D~ 195 (558)
+...|....+.+|+.++|.|.+.+.|.+.+.|+|.. . .+. ....|+.+.. ..+|.|.+++.+|+
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~Ds 85 (109)
T 2q20_A 6 MTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDI 85 (109)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhhC
Confidence 344566778899999999999999888899999853 1 111 0123555432 23799999999999
Q ss_pred eEEEEEEEeC
Q psy10160 196 GEYRCVASNS 205 (558)
Q Consensus 196 G~Y~C~a~N~ 205 (558)
|.|.|.+.|.
T Consensus 86 G~Y~C~~~~~ 95 (109)
T 2q20_A 86 ATYYCQQYDN 95 (109)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999885
No 498
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.79 E-value=9.3e-09 Score=83.37 Aligned_cols=81 Identities=16% Similarity=0.303 Sum_probs=58.9
Q ss_pred ceEeeCCCcEEEEeEeeccCCC---eEEEEECCEE--------ec--------cCCceEEEcc-----CCeEEEccCCCC
Q psy10160 138 TQVFGVGSDISIPCDVDGYPIP---QVFWYKDGQV--------IE--------NDGVHYRITE-----SNRLHINQANAT 193 (558)
Q Consensus 138 ~~~v~~G~~v~L~C~~~g~P~p---~i~W~~~g~~--------l~--------~~~~~~~~~~-----~~sL~I~~v~~~ 193 (558)
...+.+|+.++|.|.+.+.|.+ .+.|+|.+.. +. ....++.+.. +.+|.|.+++.+
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 82 (109)
T 2oyp_A 3 GYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLD 82 (109)
T ss_dssp EEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGG
T ss_pred CEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCCh
Confidence 4567899999999999876544 3999995421 00 0122444433 248999999999
Q ss_pred CCeEEEEEEEeCCceeeEEEEEEEe
Q psy10160 194 DSGEYRCVASNSYTSDENAVTIRVE 218 (558)
Q Consensus 194 D~G~Y~C~a~N~~G~~~~~~~l~V~ 218 (558)
|+|.|.|.+.|..+.....+.|.|.
T Consensus 83 D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 83 DHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp GCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred hCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999988777667776663
No 499
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.79 E-value=1.9e-08 Score=81.53 Aligned_cols=73 Identities=19% Similarity=0.352 Sum_probs=55.2
Q ss_pred EecCCceEeeCCCcEEEEeEeeccCCCeEEEEECC--E---Eec-c-------CCceEEEccC---CeEEEccCCCCCCe
Q psy10160 133 NITLETQVFGVGSDISIPCDVDGYPIPQVFWYKDG--Q---VIE-N-------DGVHYRITES---NRLHINQANATDSG 196 (558)
Q Consensus 133 ~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~~~g--~---~l~-~-------~~~~~~~~~~---~sL~I~~v~~~D~G 196 (558)
...|....+.+|++++|.|.+.+.|.+.+.|+|.. . .+. . ...|+.+... .+|.|.+++.+|+|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 84 (108)
T 1qfw_M 5 TQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAEDFA 84 (108)
T ss_dssp EEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTCCS
T ss_pred EEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhhCE
Confidence 34566778899999999999999888899999853 1 111 0 1235554432 37999999999999
Q ss_pred EEEEEEEeC
Q psy10160 197 EYRCVASNS 205 (558)
Q Consensus 197 ~Y~C~a~N~ 205 (558)
.|.|.+.|.
T Consensus 85 ~Y~C~~~~~ 93 (108)
T 1qfw_M 85 DYHCGQTYN 93 (108)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEccC
Confidence 999999885
No 500
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.79 E-value=5.5e-09 Score=99.95 Aligned_cols=72 Identities=13% Similarity=0.313 Sum_probs=48.7
Q ss_pred eeCCCcEEEEeEeec-cC-CCeEEEEECCEEeccC----------CceEEEccCCeEEEccCCCCCCeEEEEEEEeCCce
Q psy10160 141 FGVGSDISIPCDVDG-YP-IPQVFWYKDGQVIEND----------GVHYRITESNRLHINQANATDSGEYRCVASNSYTS 208 (558)
Q Consensus 141 v~~G~~v~L~C~~~g-~P-~p~i~W~~~g~~l~~~----------~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~G~ 208 (558)
+.+|+.+.|.|.+.+ +| .+.+.| ++..+... +..|.+. ++|.|.....+| |.|+|.+.|..+.
T Consensus 180 ~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~--s~L~i~~~~~~~-~~ytC~v~h~~~~ 254 (267)
T 3u1s_H 180 STSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLS--SVVTVPSSSLGT-QTYICNVNHKPSN 254 (267)
T ss_dssp GEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEE--EEEEEEGGGGGT-CCCEEEEEEGGGT
T ss_pred cCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEE--EEEEECchhcCC-CEEEEEEEECCCC
Confidence 357999999999988 45 456999 55444221 1122211 368898888889 9999999998776
Q ss_pred eeEEEEEEE
Q psy10160 209 DENAVTIRV 217 (558)
Q Consensus 209 ~~~~~~l~V 217 (558)
......+.+
T Consensus 255 ~~~~~~~~~ 263 (267)
T 3u1s_H 255 TKVDKKVEP 263 (267)
T ss_dssp EEEEEECCC
T ss_pred cceEEEccc
Confidence 554444443
Done!