BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10162
(141 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BYB|A Chain A, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|B Chain B, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|C Chain C, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3UIR|C Chain C, Crystal Structure Of The Plasmin-Textilinin-1 Complex
pdb|3UIR|D Chain D, Crystal Structure Of The Plasmin-Textilinin-1 Complex
Length = 59
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F + AD G + F FY++PD C EF YGGC G+AN F T EECES C
Sbjct: 6 FCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 57
>pdb|3D65|I Chain I, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom, In Complex With Trypsin
Length = 57
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F + AD G + F FY++PD C EF YGGC G+AN F T EECES C
Sbjct: 4 FCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTC 55
>pdb|4DTG|K Chain K, Hemostatic Effect Of A Monoclonal Antibody Mab 2021
Blocking The Interaction Between Fxa And Tfpi In A
Rabbit Hemophilia Model
Length = 66
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F + DPG +G ++++++ T C+ F+YGGC G+ N F T+EEC++ C
Sbjct: 6 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
>pdb|1TFX|C Chain C, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
pdb|1TFX|D Chain D, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
Length = 58
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F + DPG +G ++++++ T C+ F+YGGC G+ N F T+EEC++ C
Sbjct: 4 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
>pdb|1ADZ|A Chain A, The Solution Structure Of The Second Kunitz Domain Of
Tissue Factor Pathway Inhibitor, Nmr, 30 Structures
Length = 71
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F + DPG +G ++++++ T C+ F+YGGC G+ N F T+EEC++ C
Sbjct: 13 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64
>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
pdb|2ODY|F Chain F, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
Length = 127
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%)
Query: 22 GFHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFKQEEI 80
GF + AD G K +FYF+ +T C F YGGC G+ N F TIEEC+ C E +
Sbjct: 4 GFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPERV 62
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 27 VADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
AD G G +++++ + C+ F YGGC G+ N + + EECE C
Sbjct: 77 AADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124
>pdb|2KCR|A Chain A, Solution Structure Of Anntoxin
Length = 61
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFKQE 78
G G+F+ +Y+D TSSC+ FRY G G+ NRF T+E+CE+ C E
Sbjct: 14 GKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCVTAE 61
>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
pdb|1ZR0|D Chain D, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
Length = 63
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 25 LIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFKQE 78
L+ D G + ++Y+D T SC++F YGGC G+AN F T E C+ C++ E
Sbjct: 10 LLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRIE 63
>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At
0.95 Angstrom
pdb|1KNT|A Chain A, The 1.6 Angstroms Structure Of The Kunitz-Type Domain
From The Alpha3 Chain Of The Human Type Vi Collagen
pdb|2KNT|A Chain A, The 1.2 Angstrom Structure Of Kunitz Type Domain C5
pdb|1KUN|A Chain A, Solution Structure Of The Human Alpha3-Chain Type Vi
Collagen C-Terminal Kunitz Domain, Nmr, 20 Structures
Length = 58
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 29 DPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
D G + K+Y+DP+T SC F YGGC G+ N+F + +ECE C
Sbjct: 10 DEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
>pdb|1JC6|A Chain A, Solution Structure Of Bungarus Faciatus Ix, A
Kunitz-Type Chymotrypsin Inhibitor
Length = 65
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
F ++ + G FY++ CQ+F YGGC G+AN F TI+EC+ C
Sbjct: 6 FCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
>pdb|1DEM|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
pdb|1DEN|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
Length = 60
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 20 LAGFHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFKQ 77
L ++ +PG FY++ C+ F + GC G++NRF TIEEC C ++
Sbjct: 3 LRKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTCIRK 60
>pdb|1DTX|A Chain A, Crystal Structure Of Alpha-Dendrotoxin From The Green
Mamba Venom And Its Comparison With The Structure Of
Bovine Pancreatic Trypsin Inhibitor
Length = 59
Score = 45.8 bits (107), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 25 LIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCF 75
++ +PG FY++ C+ F + GC G++NRF TIEEC C
Sbjct: 8 ILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1
Length = 75
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEEC 70
G +G+F ++Y+DP C+ F YGGC G+ N + EEC
Sbjct: 29 GRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEEC 68
>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis
Angusticeps, Nmr, 15 Structures
Length = 60
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 23/44 (52%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K FS FYF C F + GC G+ANRF TI EC C
Sbjct: 14 GSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57
>pdb|1DTK|A Chain A, The Nmr Solution Structure Of Dendrotoxin K From The
Venom Of Dendroaspis Polylepis Polylepis
Length = 57
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 22/44 (50%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K FY+ C F Y GC G+ANRF TIEEC C
Sbjct: 12 GPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55
>pdb|2JOT|A Chain A, Nuclear Magnetic Resonance Studies On Huwentoxin-Xi From
The Chinese Bird Spider Ornithoctonus Huwena
Length = 55
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 26 IVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFK 76
+ +D G K +F ++YF+ T C +F YGGC G+ N+F T E C C K
Sbjct: 6 LPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCAK 54
>pdb|1IRH|A Chain A, The Solution Structure Of The Third Kunitz Domain Of
Tissue Factor Pathway Inhibitor
Length = 61
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 25 LIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFK 76
L AD G + N ++FY++ C+ F+Y GC G+ N F++ +EC C K
Sbjct: 9 LTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60
>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
Length = 57
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G K S++YFD C F YGGC G+ N F T E C + C
Sbjct: 7 AETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1AAP|B Chain B, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1TAW|B Chain B, Bovine Trypsin Complexed To Appi
Length = 58
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G + S++YFD C F YGGC G+ N F T E C + C
Sbjct: 9 AETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation
Factor Xi In Complex With Kunitz Protease Inhibitor
Domain Of Protease Nexin Ii
Length = 57
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G + S++YFD C F YGGC G+ N F T E C + C
Sbjct: 7 AETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of
Trypsin
Length = 56
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G + S++YFD C F YGGC G+ N F T E C + C
Sbjct: 9 AETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
Length = 52
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G + S++YFD C F YGGC G+ N F T E C + C
Sbjct: 6 AETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human
Inter-Alpha-Inhibitor Complex
Length = 147
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFKQEEI-LPVGSNSTE 89
G G S+++++ + +C+ F+YGGC G+ N F T +EC C LP+
Sbjct: 33 GPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAACNLPIVRGP-- 90
Query: 90 ARSGIIIWAMNKASTK 105
R+ I +WA + K
Sbjct: 91 CRAFIQLWAFDAVKGK 106
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 16 SCTVLAGFHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+C +A +L + G + + FD C F YGGC G+ N+F + +EC +C
Sbjct: 75 TCRTVAACNLPIVR-GPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 132
>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi
pdb|1CA0|I Chain I, Bovine Chymotrypsin Complexed To Appi
Length = 54
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 28 ADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
A+ G + S++YFD C F YGGC G+ N F T E C + C
Sbjct: 7 AETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|1BUN|B Chain B, Structure Of Beta2-Bungarotoxin: Potassium Channel
Binding By Kunitz Modules And Targeted Phospholipase
Action
Length = 61
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 40 FYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCFK 76
FY+ P C +FRYGGC G+ N F + C C +
Sbjct: 23 FYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLE 59
>pdb|2DDI|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human
Wfikkn1
pdb|2DDJ|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human
Wfikkn1
Length = 70
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 25 LIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
++ A G +G ++ + P C F YGGC G+ N F + E CE C
Sbjct: 11 VLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
>pdb|3M7Q|B Chain B, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Pancreatic Trypsin
Length = 61
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 26 IVADP---GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
I ++P G KG F +FYFD +T C F YGGC G+ N F T+ +C + C
Sbjct: 6 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
>pdb|3OFW|A Chain A, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Carribean Sea Anemone
Stichodactyla Helianthus
Length = 60
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 26 IVADP---GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
I ++P G KG F +FYFD +T C F YGGC G+ N F T+ +C + C
Sbjct: 6 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
>pdb|1SHP|A Chain A, The Nmr Solution Structure Of A Kunitz-Type Proteinase
Inhibitor From The Sea Anemone Stichodactyla Helianthus
Length = 55
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 26 IVADP---GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
I ++P G KG F +FYFD +T C F YGGC G+ N F T+ +C + C
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|1CO7|I Chain I, R117h Mutant Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
Length = 99
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 46 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 89
>pdb|3T62|D Chain D, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|E Chain E, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|F Chain F, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
Length = 54
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 26 IVADP---GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
I ++P G KG F +FYFD +T C F YGGC G+ N F T+ +C + C
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|3FP7|J Chain J, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Cleaved At The
Scissile Bond (Lys15-Ala16) Determined To The 1.46 A
Resolution Limit
Length = 43
Score = 34.7 bits (78), Expect = 0.019, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 5 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 40
>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
pdb|3TGJ|I Chain I, S195a Trypsinogen Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|1F5R|I Chain I, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1F7Z|I Chain I, Rat Trypsinogen K15a Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|3TGK|I Chain I, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17
Complexed With Bovine Pancreatic Trypsin Inhibitor
(Bpti)
Length = 65
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized)
Length = 58
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTC 55
>pdb|1YKT|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2KAI|I Chain I, Refined 2.5 Angstroms X-Ray Crystal Structure Of The
Complex Formed By Porcine Kallikrein A And The Bovine
Pancreatic Trypsin Inhibitor. Crystallization,
Patterson Search, Structure Determination, Refinement,
Structure And Comparison With Its Components And With
The Bovine Trypsin- Pancreatic Trypsin Inhibitor
Complex
pdb|2PTC|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2TGP|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|3TPI|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|1MTN|D Chain D, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1MTN|H Chain H, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1CBW|D Chain D, Bovine Chymotrypsin Complexed To Bpti
pdb|1CBW|I Chain I, Bovine Chymotrypsin Complexed To Bpti
pdb|1BTH|P Chain P, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1BTH|Q Chain Q, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|A Chain A, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|B Chain B, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|C Chain C, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|D Chain D, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|E Chain E, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|1BHC|A Chain A, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|B Chain B, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|C Chain C, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|D Chain D, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|E Chain E, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|F Chain F, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|G Chain G, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|H Chain H, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|I Chain I, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|J Chain J, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BZX|I Chain I, The Crystal Structure Of Anionic Salmon Trypsin In
Complex With Bovine Pancreatic Trypsin Inhibitor
pdb|1B0C|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|3BTK|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1D0D|B Chain B, Crystal Structure Of Tick Anticoagulant Protein
Complexed With Bovine Pancreatic Trypsin Inhibitor
pdb|1FY8|I Chain I, Crystal Structure Of The Deltaile16val17 Rat Anionic
Trypsinogen-Bpti Complex
pdb|1EAW|B Chain B, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAW|D Chain D, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|2FTL|I Chain I, Crystal Structure Of Trypsin Complexed With Bpti At 100k
pdb|2IJO|I Chain I, Crystal Structure Of The West Nile Virus Ns2b-Ns3
Protease Complexed With Bovine Pancreatic Trypsin
Inhibitor
pdb|1BPI|A Chain A, The Structure Of Bovine Pancreatic Trypsin Inhibitor At
125k: Definition Of Carboxyl-Terminal Residues
Glycine-57 And Alanine-58
pdb|4PTI|A Chain A, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|6PTI|A Chain A, Structure Of Form Iii Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2TPI|I Chain I, On The Disordered Activation Domain In Trypsinogen.
Chemical Labelling And Low-Temperature Crystallography
pdb|1OA5|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|1OA6|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|2R9P|I Chain I, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor(Bpti)
pdb|2R9P|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor(Bpti)
pdb|2R9P|F Chain F, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor(Bpti)
pdb|2R9P|G Chain G, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor(Bpti)
pdb|2RA3|I Chain I, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|2RA3|C Chain C, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|3FP6|I Chain I, Anionic Trypsin In Complex With Bovine Pancreatic
Trypsin Inhibitor (Bpti) Determined To The 1.49 A
Resolution Limit
pdb|3FP8|I Chain I, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Determined To The
1.46 A Resolution Limit
pdb|3GYM|I Chain I, Structure Of Prostasin In Complex With Aprotinin
pdb|3GYM|J Chain J, Structure Of Prostasin In Complex With Aprotinin
pdb|3LDI|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3U1J|E Chain E, Aprotinin Bound To Dengue Virus Protease
pdb|4DG4|E Chain E, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|C Chain C, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|F Chain F, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|H Chain H, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
Length = 58
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor, 3-58 Bpti
Length = 56
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 10 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 53
>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic
Resonance Solution Structure Of The Bovine Pancreatic
Trypsin Inhibitor And Comparison With Three Crystal
Structures
pdb|5PTI|A Chain A, Structure Of Bovine Pancreatic Trypsin Inhibitor.
Results Of Joint Neutron And X-Ray Refinement Of
Crystal Form Ii
pdb|3OTJ|I Chain I, A Crystal Structure Of Trypsin Complexed With Bpti
(Bovine Pancreatic Trypsin Inhibitor) By X-RayNEUTRON
JOINT REFINEMENT
Length = 58
Score = 34.3 bits (77), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In
Complex With Trypsin
Length = 58
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor Variant (Bpti-K15rR17D)
Length = 58
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3UOU|B Chain B, Crystal Structure Of The Kunitz-Type Protease Inhibitor
Shpi-1 Lys13leu Mutant In Complex With Pancreatic
Elastase
Length = 55
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 26 IVADP---GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
I ++P G G F +FYFD +T C F YGGC G+ N F T+ +C + C
Sbjct: 2 ICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s)
Length = 56
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC +N F + E+C C
Sbjct: 10 GPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTC 53
>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With
Altered Binding Loop Sequence
pdb|1G6X|A Chain A, Ultra High Resolution Structure Of Bovine Pancreatic
Trypsin Inhibitor (Bpti) Mutant With Altered Binding
Loop Sequence
pdb|1K6U|A Chain A, Crystal Structure Of Cyclic Bovine Pancreatic Trypsin
Inhibitor
Length = 58
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal
Structure Of The Ternary Complex Formed By Bovine
Trypsinogen, Valine-valine And The Arg15 Analogue Of
Bovine Pancreatic Trypsin Inhibitor
Length = 58
Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1BRB|I Chain I, Crystal Structures Of Rat Anionic Trypsin Complexed With
The Protein Inhibitors Appi And Bpti
Length = 58
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEEC 70
G K +++++ CQ F YGGC N F + E+C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDC 51
>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor Variant (Bpti-K15rR17G)
Length = 58
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 32.7 bits (73), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K ++ ++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++ + CQ F YGGC N F + E+C C
Sbjct: 12 GPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a
pdb|1JV9|A Chain A, Nmr Structure Of Bpti Mutant G37a
Length = 58
Score = 32.3 bits (72), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YG C N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTC 55
>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta-Trypsin And Ten P1 Variants Of Bpti.
pdb|1T7C|B Chain B, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T7C|D Chain D, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8L|D Chain D, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 59
Score = 32.3 bits (72), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G +++++ CQ F YGGC N F + E+C C
Sbjct: 13 GPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 56
>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v
Length = 58
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|D Chain D, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|F Chain F, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
Length = 58
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G + +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTT|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8N|B Chain B, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8N|D Chain D, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8M|B Chain B, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8M|D Chain D, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTC 55
>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The
Bovine Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G +++++ CQ F YGGC N F + E+C C
Sbjct: 12 GPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1FAK|I Chain I, Human Tissue Factor Complexed With Coagulation Factor
Viia Inhibited With A Bpti-Mutant
Length = 55
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8O|B Chain B, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8O|D Chain D, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1P2I|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGGC N + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTC 55
>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti.
pdb|1P2Q|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2Q|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 39 KFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
+++++ CQ F YGGC N F + E+C C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In
Complex With Trypsin
Length = 58
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGG N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti
Variant (Tyr35- >gly)
pdb|8PTI|A Chain A, Crystal Structure Of A Y35g Mutant Of Bovine Pancreatic
Trypsin Inhibitor
Length = 58
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F GGC N F + E+C C
Sbjct: 12 GPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTC 55
>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser,
Cys38->ser) In Complex With Trypsin
Length = 58
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ CQ F YGG N F + E+C C
Sbjct: 12 GPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|2A4M|A Chain A, Structure Of Trprs Ii Bound To Atp
pdb|2A4M|B Chain B, Structure Of Trprs Ii Bound To Atp
pdb|2A4M|C Chain C, Structure Of Trprs Ii Bound To Atp
Length = 331
Score = 29.3 bits (64), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 24 HLIVADPGHVKGN--FSKF-YFDPDTSSCQ----EFRYGGC 57
HL +DPG V+GN F+ FDPD + Q ++R GG
Sbjct: 226 HLRASDPGRVEGNPVFTFLDAFDPDPARVQALKDQYRAGGL 266
>pdb|1LD6|A Chain A, Structure Of Bpti_8a Mutant
Length = 58
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 40 FYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
++++ CQ F YG C N F + E+C C
Sbjct: 21 YFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTC 55
>pdb|1YI8|B Chain B, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YI8|A Chain A, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YI8|C Chain C, Crystal Structure Of Tryptophanyl Trrna Synthetase Ii From
Deinococcus Radiodurans In Complex With L-Trp
pdb|1YIA|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YIA|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YIA|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With 5-Hydroxy
Tryptophan.
pdb|1YID|B Chain B, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp.
pdb|1YID|A Chain A, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp.
pdb|1YID|C Chain C, Crystal Structure Of Tryptophanyl Trna Synthetase Ii From
Deinococcus Radiodurans In Complex With Atp
Length = 351
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Query: 24 HLIVADPGHVKGN--FSKF-YFDPDTSSCQ----EFRYGGC 57
HL +DPG V+GN F+ FDPD + Q ++R GG
Sbjct: 246 HLRASDPGRVEGNPVFTFLDAFDPDPARVQALKDQYRAGGL 286
>pdb|2ZZF|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase Without
Oligomerization Domain
pdb|2ZZG|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With 5''-O-(N-(L-Alanyl)-Sulfamyoxyl) Adenine Without
Oligomerization Domain
pdb|2ZZG|B Chain B, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With 5''-O-(N-(L-Alanyl)-Sulfamyoxyl) Adenine Without
Oligomerization Domain
Length = 752
Score = 28.9 bits (63), Expect = 0.99, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 42 FDPDTSSC-----QEFRYGGCPGSANRFSTIEECESFC--FKQEEILPVG 84
DPD +C E+++ G PG +++ E E F F++ EI P G
Sbjct: 30 LDPDRETCGDPPCDEYQFIGKPGIPRKYTLDEMREKFLRFFEKHEIYPHG 79
>pdb|2VRP|A Chain A, Structure Of Rhodocytin
pdb|3BX4|A Chain A, Crystal Structure Of The Snake Venom Toxin Aggretin
pdb|3BX4|C Chain C, Crystal Structure Of The Snake Venom Toxin Aggretin
Length = 136
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 10/89 (11%)
Query: 57 CPGSANRFSTIEECESFCFKQEEILPVGSNSTEARSGIIIWAM---NKASTKFHVILGLL 113
C + N T +E E FC QE + S + + + W + ++ + + +V +GL
Sbjct: 16 CYQAFNEQKTWDEAEKFCRAQENGAHLASIESNGEADFVSWLISQKDELADEDYVWIGLR 75
Query: 114 YKNRS-------GDKTRQDYCTKIDLETK 135
+N+ D + Y IDL TK
Sbjct: 76 AQNKEQQCSSEWSDGSSVSYENLIDLHTK 104
>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
pdb|1AAL|B Chain B, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
Length = 58
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ Q F YGGC N F + E+ C
Sbjct: 12 GPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide
Bridge. The X-Ray Structure Of The C30a(Slash)c51a
Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6
Angstroms
Length = 58
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 31 GHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFC 74
G K +++++ Q F YGGC N F + E+ C
Sbjct: 12 GPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTC 55
>pdb|1YLC|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEE 69
F L G K +++++ Q F YGGC N F + E+
Sbjct: 4 FXLEPPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNFKSAED 50
>pdb|1Y62|A Chain A, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|B Chain B, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|C Chain C, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|D Chain D, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|E Chain E, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|F Chain F, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|2CA7|A Chain A, Conkunitzin-S1 Is The First Member Of A New Kunitz-Type
Neurotoxin Family- Structural And Functional
Characterization
Length = 60
Score = 26.6 bits (57), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 20/50 (40%)
Query: 26 IVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEECESFCF 75
+ AD G + Y++ C F Y G G+ N F +C+ C
Sbjct: 9 LPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCL 58
>pdb|4DHK|A Chain A, Crystal Structure Of A Deoxycytidine Triphosphate
Deaminase (Dctp Deaminase) From Burkholderia
Thailandensis
pdb|4DHK|B Chain B, Crystal Structure Of A Deoxycytidine Triphosphate
Deaminase (Dctp Deaminase) From Burkholderia
Thailandensis
Length = 191
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 6 PDQRRA-----DLGASCTVLAGFHLIVADPGHVKGNFSKFYFDP---DTSSCQEFRYGGC 57
PDQ RA + + T G+ + AD + N + DP D S +F+ C
Sbjct: 26 PDQVRAAEDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEGSFVDFKGDVC 85
Query: 58 PGSANRFSTIEECESFCFKQEEILPVGSNSTEARSGIII 96
N F+ E F + + ST AR GII+
Sbjct: 86 IIPPNSFALARTVEYFRIPRTVLTVCLGKSTYARCGIIV 124
>pdb|1YLD|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 23 FHLIVADPGHVKGNFSKFYFDPDTSSCQEFRYGGCPGSANRFSTIEE 69
F L G K +++++ Q F YGGC N F + E+
Sbjct: 4 FXLEPPYTGPCKARIIRYFYNAPDGLXQTFVYGGCRAKRNNFKSAED 50
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,572,615
Number of Sequences: 62578
Number of extensions: 179182
Number of successful extensions: 401
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 313
Number of HSP's gapped (non-prelim): 95
length of query: 141
length of database: 14,973,337
effective HSP length: 89
effective length of query: 52
effective length of database: 9,403,895
effective search space: 489002540
effective search space used: 489002540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 46 (22.3 bits)