BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10163
(615 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ODY|E Chain E, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
pdb|2ODY|F Chain F, Thrombin-bound Boophilin Displays A Functional And
Accessible Reactive-site Loop
Length = 127
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPRQEAA 494
++Y++ +T C F YGGC GN N F CQK C P S E A
Sbjct: 21 RFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACG---APERVNDFESADFKTGCEPA 77
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
++SG C Q W+++ + C++F+YGGC GN N + +EE+CE +C
Sbjct: 78 --------ADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG---- 550
RN C L ++ G C +YF+ T +C F YGGC GN N F T E+C++ CG
Sbjct: 2 RNGFCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACGAPER 61
Query: 551 --EFRAED-PVGQRPAAVIG 567
+F + D G PAA G
Sbjct: 62 VNDFESADFKTGCEPAADSG 81
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
C PA G C + +Y+++ +C F YGGCGGN+NNF T E CQ C
Sbjct: 5 FCRLPADEGICKALIPRFYFNTETGKCTMFSYGGCGGNENNFETIEECQKACG 57
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
K C A G CA + W+Y+ C F YGGCGGN NN+ +EE C+ C
Sbjct: 71 KTGCEPAADSGSCAGQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 431 GNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
G E+W+Y+ + C+ F YGGC GN N + + C+ C
Sbjct: 85 GQLERWFYNVQSGECETFVYGGCGGNDNNYESEEECELVC 124
>pdb|1BIK|A Chain A, X-Ray Structure Of Bikunin From The Human
Inter-Alpha-Inhibitor Complex
Length = 147
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 431 GNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPPPDPAQTPSTTLAPR 490
G +++Y+ + +C+ FQYGGC GN N F + C + C R
Sbjct: 37 GMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC-------------------R 77
Query: 491 QEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
AA C L GPC W FD +C F YGGC+GN N+F +E++C CG
Sbjct: 78 TVAA----CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYCG 133
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
+ D C L +GPC + ++++ + C++F YGGC GN N F TE++C + C
Sbjct: 22 KEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 76
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 42 FIAKDICLQ----------PAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTE 91
F+ + CLQ P V G C ++ W +D+++ +C F YGGC GN N F +E
Sbjct: 66 FVTEKECLQTCRTVAACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSE 125
Query: 92 EACQARCA 99
+ C+ C
Sbjct: 126 KECREYCG 133
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
+D C G C ++Y+ C F YGGC GN NNF+TE+ C C
Sbjct: 23 EDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 76
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 428 IVRG----NYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
IVRG + W +D C F YGGCQGN N+F + C++ C
Sbjct: 86 IVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 132
>pdb|1AAP|A Chain A, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1AAP|B Chain B, X-Ray Crystal Structure Of The Protease Inhibitor Domain
Of Alzheimer's Amyloid Beta-Protein Precursor
pdb|1TAW|B Chain B, Bovine Trypsin Complexed To Appi
Length = 58
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
+++C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 2 REVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +CG
Sbjct: 3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +WY+D C PF YGGC GN N F+ + C C
Sbjct: 15 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1BRC|I Chain I, Relocating A Negative Charge In The Binding Pocket Of
Trypsin
Length = 56
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%)
Query: 44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
+++C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 1 VREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +CG
Sbjct: 3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 56
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +WY+D C PF YGGC GN N F+ + C C
Sbjct: 15 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>pdb|1KTH|A Chain A, The Anisotropic Refinement Of Kunitz Type Domain C5 At
0.95 Angstrom
pdb|1KNT|A Chain A, The 1.6 Angstroms Structure Of The Kunitz-Type Domain
From The Alpha3 Chain Of The Human Type Vi Collagen
pdb|2KNT|A Chain A, The 1.2 Angstrom Structure Of Kunitz Type Domain C5
pdb|1KUN|A Chain A, Solution Structure Of The Human Alpha3-Chain Type Vi
Collagen C-Terminal Kunitz Domain, Nmr, 20 Structures
Length = 58
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
DIC P G C +++L WYYD C +F+YGGCGGN+N F +++ C+ CA
Sbjct: 3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA 56
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
D+C L + G C WY+D NT C F YGGC GN N+F ++++CE++C
Sbjct: 3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
+WYYD +T SC F YGGC GN N+F Q C+K C
Sbjct: 20 KWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCA 56
>pdb|3L3T|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
pdb|3L3T|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor Variant (Appir15k)
Length = 57
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
++C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 1 EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +CG
Sbjct: 1 EVCSEQAETGPCKAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNI 474
+WY+D C PF YGGC GN N F+ + C C I
Sbjct: 18 RWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
>pdb|1ZJD|B Chain B, Crystal Structure Of The Catalytic Domain Of Coagulation
Factor Xi In Complex With Kunitz Protease Inhibitor
Domain Of Protease Nexin Ii
Length = 57
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
++C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +CG
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNI 474
R +WY+D C PF YGGC GN N F+ + C C I
Sbjct: 13 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI 57
>pdb|1CA0|D Chain D, Bovine Chymotrypsin Complexed To Appi
pdb|1CA0|I Chain I, Bovine Chymotrypsin Complexed To Appi
Length = 54
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
++C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +CG
Sbjct: 1 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCG 54
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +WY+D C PF YGGC GN N F+ + C C
Sbjct: 13 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 53
>pdb|3L33|E Chain E, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|F Chain F, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|G Chain G, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
pdb|3L33|H Chain H, Human Mesotrypsin Complexed With Amyloid Precursor
Protein Inhibitor(Appi)
Length = 52
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
+C + A G C + WY+D E +C F+YGGCGGN+NNF TEE C A C
Sbjct: 1 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
+C ++E+GPC + WYFD +C F YGGC GN N F+TEE C +C
Sbjct: 1 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +WY+D C PF YGGC GN N F+ + C C
Sbjct: 12 RAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 52
>pdb|3BYB|A Chain A, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|B Chain B, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3BYB|C Chain C, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom
pdb|3UIR|C Chain C, Crystal Structure Of The Plasmin-Textilinin-1 Complex
pdb|3UIR|D Chain D, Crystal Structure Of The Plasmin-Textilinin-1 Complex
Length = 59
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C L +++GPC + ++Y++ + +C FIYGGCEGNAN F T+E+CE C
Sbjct: 3 RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 58
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D C PA G C ++YY+ E +C +F YGGC GN NNF+T+E C++ CA
Sbjct: 5 DFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCAA 59
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
R + +YY+ D C F YGGC+GN N F + C+ C
Sbjct: 17 RVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 58
>pdb|3D65|I Chain I, Crystal Structure Of Textilinin-1, A Kunitz-Type Serine
Protease Inhibitor From The Australian Common Brown
Snake Venom, In Complex With Trypsin
Length = 57
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C L +++GPC + ++Y++ + +C FIYGGCEGNAN F T+E+CE C
Sbjct: 1 RPDFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 56
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D C PA G C ++YY+ E +C +F YGGC GN NNF+T+E C++ CA
Sbjct: 3 DFCELPADTGPCRVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCAA 57
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
R + +YY+ D C F YGGC+GN N F + C+ C
Sbjct: 15 RVRFPSFYYNPDEKKCLEFIYGGCEGNANNFITKEECESTCA 56
>pdb|1ZR0|B Chain B, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
pdb|1ZR0|D Chain D, Crystal Structure Of Kunitz Domain 1 Of Tissue Factor
Pathway Inhibitor-2 With Bovine Trypsin
Length = 63
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
+ICL P G C +L +YYD CRQF YGGC GN NNF T EAC C
Sbjct: 7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
++C L + GPC +Y+DR T C+ F+YGGCEGNAN F T E C+ C
Sbjct: 7 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
++YYDR T SC+ F YGGC+GN N F +C C
Sbjct: 24 RYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
>pdb|2DDI|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
pdb|2DDJ|A Chain A, Nmr Structure Of The Second Kunitz Domain Of Human Wfikkn1
Length = 70
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 31/58 (53%)
Query: 492 EAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
EA D C L + GPC E W + +C F+YGGCEGN N F++ E CE C
Sbjct: 3 EAEFTDACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
D C+ PAV G C + W Y L +C F YGGC GN NNF + E+C+ C
Sbjct: 8 DACVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
RG +W Y C PF YGGC+GN N F+ + SC+ C
Sbjct: 20 RGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 60
>pdb|1YC0|I Chain I, Short Form Hgfa With First Kunitz Domain From Hai-1
Length = 75
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 31/57 (54%)
Query: 44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
+D CL +G C WYYD E C+ F YGGC GN+NN++ EE C C G
Sbjct: 18 TEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILACRG 74
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
D C ++ G C WY+D C+SF+YGGC GN N + EE+C C
Sbjct: 20 DYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 72
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 411 CVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
C+A+N +G RG++ +WYYD C+ F YGGC GN N + + C C
Sbjct: 22 CLASNKVGR---------CRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYLREEECILAC 72
>pdb|1CO7|I Chain I, R117h Mutant Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
Length = 99
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%)
Query: 480 AQTPSTTLAPRQEAARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRF 539
A TP + + +A R D C +GPC + ++++ CQ+F+YGGC N F
Sbjct: 20 ASTPGCDTSNQAKAQRPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNF 79
Query: 540 NTEEQCERLCG 550
+ E C R CG
Sbjct: 80 KSAEDCMRTCG 90
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 37 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 91
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPP 476
+++Y+ CQ F YGGC+ N F C + C I P
Sbjct: 54 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGP 95
>pdb|1JC6|A Chain A, Solution Structure Of Bungarus Faciatus Ix, A Kunitz-Type
Chymotrypsin Inhibitor
Length = 65
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
R C L E+G C A+Y++ + ++CQ F YGGC GNAN F T ++C+R C
Sbjct: 3 RPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 55 GDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
G C + +YY+S +C++F YGGCGGN NNF T + CQ CA
Sbjct: 14 GRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCA 58
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
+YY+ CQ F YGGC GN N F CQ+ C
Sbjct: 23 FYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCA 58
>pdb|3PXJ|A Chain A, Tandem Ig Repeats Of Dlar
pdb|3PXJ|B Chain B, Tandem Ig Repeats Of Dlar
pdb|3PXJ|C Chain C, Tandem Ig Repeats Of Dlar
pdb|3PXJ|D Chain D, Tandem Ig Repeats Of Dlar
Length = 210
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCV 412
E G+ V + C AIG P P W K + +D S+ Y L DG LQI +D G Y CV
Sbjct: 125 EVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-DGFLQIENSREEDQGKYECV 183
Query: 413 AANGIGDPIRKEFNVIVR 430
A N +G K N+ V+
Sbjct: 184 AENSMGTEHSKATNLYVK 201
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYK-LTLDGVLQIVGL--VR--QDAGIY 409
G + C A G P P W K + G+ Y L G + I+ + VR +D Y
Sbjct: 23 GGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPY 82
Query: 410 VCVAANGIGDPIRKEFNVIV 429
CVA NG+GD + + + +
Sbjct: 83 ECVAENGVGDAVSADATLTI 102
>pdb|1DEM|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
pdb|1DEN|A Chain A, Proteinase Inhibitor Homologues As Potassium Channel
Blockers
Length = 60
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
LC L G C Q+ A+Y+++ +C+ F + GC GN+NRF T E+C R C
Sbjct: 5 KLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTC 57
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
+ +C+ G C + +YY+ + +C F + GCGGN N F T E C+ C
Sbjct: 4 RKLCILHRNPGRCYQKIPAFYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTC 57
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQN 473
+YY++ C+ F + GC GN NRF C++ C++
Sbjct: 23 FYYNQKKKQCEGFTWSGCGGNSNRFKTIEECRRTCIRK 60
>pdb|2YD1|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of
Drosophila Receptor Protein Tyrosine Phosphatase Dlar
Length = 212
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCV 412
E G+ V + C AIG P P W K + +D S+ Y L DG LQI +D G Y CV
Sbjct: 123 EVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-DGFLQIENSREEDQGKYECV 181
Query: 413 AANGIGDPIRKEFNVIVR 430
A N +G K N+ V+
Sbjct: 182 AENSMGTEHSKATNLYVK 199
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYK-LTLDGVLQIVGL--VR--QDAGIY 409
G + C A G P P W K + G+ Y L G + I+ + VR +D Y
Sbjct: 21 GGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPY 80
Query: 410 VCVAANGIGDPIRKEFNVIV 429
CVA NG+GD + + + +
Sbjct: 81 ECVAENGVGDAVSADATLTI 100
>pdb|1IRH|A Chain A, The Solution Structure Of The Third Kunitz Domain Of
Tissue Factor Pathway Inhibitor
Length = 61
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 41 QFIAKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
+F CL PA G C +YY+S+ +CR F Y GCGGN+NNF +++ C C
Sbjct: 1 EFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60
Query: 101 G 101
G
Sbjct: 61 G 61
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 428 IVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
+ R N ++YY+ C+PF+Y GC GN N F + C + C +
Sbjct: 16 LCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRACKK 60
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
C ++ G C E +Y++ +C+ F Y GC GN N F ++++C R C
Sbjct: 8 CLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
>pdb|1TFX|C Chain C, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
pdb|1TFX|D Chain D, Complex Of The Second Kunitz Domain Of Tissue Factor
Pathway Inhibitor With Porcine Trypsin
Length = 58
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
D CFLE + G C ++++ T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
D C G C Y+ ++Y++ +C +F YGGC GN NNF T E C+ C G
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG 58
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 428 IVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
I RG +++Y+ T C+ F+YGGC GN N F C+ C
Sbjct: 13 ICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
>pdb|2JOT|A Chain A, Nuclear Magnetic Resonance Studies On Huwentoxin-Xi From
The Chinese Bird Spider Ornithoctonus Huwena
Length = 55
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGE 551
D C L S+ G C WYF+ T C FIYGGC GN N+F T+E C + C +
Sbjct: 2 DTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCAK 54
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
D C P+ G C WY++ C +F YGGCGGN N F T+EAC RCA
Sbjct: 2 DTCRLPSDRGRCKASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCA 53
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
+ ++E+WY++ T C F YGGC GN N+F Q +C KRC +
Sbjct: 14 KASFERWYFNGRT--CAKFIYGGCGGNGNKFPTQEACMKRCAK 54
>pdb|4DTG|K Chain K, Hemostatic Effect Of A Monoclonal Antibody Mab 2021
Blocking The Interaction Between Fxa And Tfpi In A
Rabbit Hemophilia Model
Length = 66
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
D CFLE + G C ++++ T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 5 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
D C G C Y+ ++Y++ +C +F YGGC GN NNF T E C+ C G
Sbjct: 5 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG 60
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 428 IVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
I RG +++Y+ T C+ F+YGGC GN N F C+ C
Sbjct: 15 ICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 57
>pdb|1DTX|A Chain A, Crystal Structure Of Alpha-Dendrotoxin From The Green
Mamba Venom And Its Comparison With The Structure Of
Bovine Pancreatic Trypsin Inhibitor
Length = 59
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
R LC L G C + A+Y+++ +C+ F + GC GN+NRF T E+C R C
Sbjct: 3 RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 45 KDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
+ +C+ G C + + +YY+ + +C +F + GCGGN N F T E C+ C G
Sbjct: 4 RKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG 59
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
+YY++ C+ F + GC GN NRF C++ C+
Sbjct: 23 FYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
>pdb|3BTT|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8N|B Chain B, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8N|D Chain D, Crystal Structure Of The P1 Thr Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPCT + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCTARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1TPA|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2KAI|I Chain I, Refined 2.5 Angstroms X-Ray Crystal Structure Of The
Complex Formed By Porcine Kallikrein A And The Bovine
Pancreatic Trypsin Inhibitor. Crystallization, Patterson
Search, Structure Determination, Refinement, Structure
And Comparison With Its Components And With The Bovine
Trypsin- Pancreatic Trypsin Inhibitor Complex
pdb|2PTC|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|2TGP|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|3TPI|I Chain I, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|1MTN|D Chain D, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1MTN|H Chain H, Bovine Alpha-Chymotrypsin:bpti Crystallization
pdb|1CBW|D Chain D, Bovine Chymotrypsin Complexed To Bpti
pdb|1CBW|I Chain I, Bovine Chymotrypsin Complexed To Bpti
pdb|1BTH|P Chain P, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1BTH|Q Chain Q, Structure Of Thrombin Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|A Chain A, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|B Chain B, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|C Chain C, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|D Chain D, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2HEX|E Chain E, Decamers Observed In The Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|1BHC|A Chain A, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|B Chain B, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|C Chain C, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|D Chain D, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|E Chain E, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|F Chain F, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|G Chain G, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|H Chain H, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|I Chain I, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BHC|J Chain J, Bovine Pancreatic Trypsin Inhibitor Crystallized From
Thiocyanate
pdb|1BZX|I Chain I, The Crystal Structure Of Anionic Salmon Trypsin In Complex
With Bovine Pancreatic Trypsin Inhibitor
pdb|1B0C|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1B0C|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallized From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|A Chain A, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|B Chain B, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|C Chain C, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|D Chain D, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|1BZ5|E Chain E, Evidence Of A Common Decamer In Three Crystal Structures
Of Bpti, Crystallize From Thiocyanate, Chloride Or
Sulfate
pdb|3BTK|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1D0D|B Chain B, Crystal Structure Of Tick Anticoagulant Protein Complexed
With Bovine Pancreatic Trypsin Inhibitor
pdb|1FY8|I Chain I, Crystal Structure Of The Deltaile16val17 Rat Anionic
Trypsinogen-Bpti Complex
pdb|1EAW|B Chain B, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|1EAW|D Chain D, Crystal Structure Of The Mtsp1 (Matriptase)-Bpti
(Aprotinin) Complex
pdb|2FTL|I Chain I, Crystal Structure Of Trypsin Complexed With Bpti At 100k
pdb|2IJO|I Chain I, Crystal Structure Of The West Nile Virus Ns2b-Ns3 Protease
Complexed With Bovine Pancreatic Trypsin Inhibitor
pdb|1BPI|A Chain A, The Structure Of Bovine Pancreatic Trypsin Inhibitor At
125k: Definition Of Carboxyl-Terminal Residues
Glycine-57 And Alanine-58
pdb|4PTI|A Chain A, The Geometry Of The Reactive Site And Of The Peptide
Groups In Trypsin, Trypsinogen And Its Complexes With
Inhibitors
pdb|6PTI|A Chain A, Structure Of Form Iii Crystals Of Bovine Pancreatic
Trypsin Inhibitor
pdb|2TPI|I Chain I, On The Disordered Activation Domain In Trypsinogen.
Chemical Labelling And Low-Temperature Crystallography
pdb|1OA5|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|1OA6|5 Chain 5, The Solution Structure Of Bovine Pancreatic Trypsin
Inhibitor At High Pressure
pdb|2R9P|I Chain I, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|F Chain F, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2R9P|G Chain G, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor(Bpti)
pdb|2RA3|I Chain I, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|2RA3|C Chain C, Human Cationic Trypsin Complexed With Bovine Pancreatic
Trypsin Inhibitor (bpti)
pdb|3FP6|I Chain I, Anionic Trypsin In Complex With Bovine Pancreatic Trypsin
Inhibitor (Bpti) Determined To The 1.49 A Resolution
Limit
pdb|3FP8|I Chain I, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Determined To The
1.46 A Resolution Limit
pdb|3GYM|I Chain I, Structure Of Prostasin In Complex With Aprotinin
pdb|3GYM|J Chain J, Structure Of Prostasin In Complex With Aprotinin
pdb|3LDI|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDI|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|D Chain D, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDM|E Chain E, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|A Chain A, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|B Chain B, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3LDJ|C Chain C, Crystal Structure Of Aprotinin In Complex With Sucrose
Octasulfate: Unusual Interactions And Implication For
Heparin Binding
pdb|3U1J|E Chain E, Aprotinin Bound To Dengue Virus Protease
pdb|4DG4|E Chain E, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|C Chain C, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|F Chain F, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
pdb|4DG4|H Chain H, Human Mesotrypsin-S39y Complexed With Bovine Pancreatic
Trypsin Inhibitor (Bpti)
Length = 58
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3TGI|I Chain I, Wild-Type Rat Anionic Trypsin Complexed With Bovine
Pancreatic Trypsin Inhibitor (Bpti)
pdb|3TGJ|I Chain I, S195a Trypsinogen Complexed With Bovine Pancreatic Trypsin
Inhibitor (Bpti)
pdb|1F5R|I Chain I, Rat Trypsinogen Mutant Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|1F7Z|I Chain I, Rat Trypsinogen K15a Complexed With Bovine Pancreatic
Trypsin Inhibitor
pdb|3TGK|I Chain I, Trypsinogen Mutant D194n And Deletion Of Ile 16-Val 17
Complexed With Bovine Pancreatic Trypsin Inhibitor
(Bpti)
Length = 65
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQNIPP 476
+++Y+ CQ F YGGC+ N F C + C I P
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGGAIGP 61
>pdb|1PIT|A Chain A, Determination Of A High-Quality Nuclear Magnetic Resonance
Solution Structure Of The Bovine Pancreatic Trypsin
Inhibitor And Comparison With Three Crystal Structures
pdb|5PTI|A Chain A, Structure Of Bovine Pancreatic Trypsin Inhibitor. Results
Of Joint Neutron And X-Ray Refinement Of Crystal Form Ii
pdb|3OTJ|I Chain I, A Crystal Structure Of Trypsin Complexed With Bpti (Bovine
Pancreatic Trypsin Inhibitor) By X-RayNEUTRON JOINT
REFINEMENT
Length = 58
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|4TPI|I Chain I, The Refined 2.2-angstroms (0.22-nm) X-ray Crystal
Structure Of The Ternary Complex Formed By Bovine
Trypsinogen, Valine-valine And The Arg15 Analogue Of
Bovine Pancreatic Trypsin Inhibitor
Length = 58
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +++Y+ CQ F YGGC+ N F C + C
Sbjct: 15 RARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|9PTI|A Chain A, Basic Pancreatic Trypsin Inhibitor (met 52 Oxidized)
Length = 58
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTCGG 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTCG 56
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCXRTC 55
>pdb|1P2K|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2O|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCVARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1UUA|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor, 3-58 Bpti
Length = 56
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 1 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 55
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 54
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 18 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 53
>pdb|3BTG|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1P2I|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2M|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCGARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1T8L|B Chain B, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8L|D Chain D, Crystal Structure Of The P1 Met Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 59
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 4 DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 2 RPDFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 57
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 21 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 56
>pdb|3BTM|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCMARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1P2J|I Chain I, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2N|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCLARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTH|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8M|B Chain B, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8M|D Chain D, Crystal Structure Of The P1 His Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCHARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTE|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta-Trypsin And Ten P1 Variants Of Bpti.
pdb|1T7C|B Chain B, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T7C|D Chain D, Crystal Structure Of The P1 Glu Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCEARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTQ|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCQARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3P92|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17G)
Length = 58
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCRAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +++Y+ CQ F YGGC+ N F C + C
Sbjct: 15 RAGIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3P95|E Chain E, Human Mesotrypsin Complexed With Bovine Pancreatic Trypsin
Inhibitor Variant (Bpti-K15rR17D)
Length = 58
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCRADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R + +++Y+ CQ F YGGC+ N F C + C
Sbjct: 15 RADIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1LD5|A Chain A, Structure Of Bpti Mutant A16v
Length = 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCRVRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTF|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti.
pdb|1P2Q|B Chain B, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
pdb|1P2Q|D Chain D, Structural Consequences Of Accommodation Of Four Non-
Cognate Amino-Acid Residues In The S1 Pocket Of Bovine
Trypsin And Chymotrypsin
Length = 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCFARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|3BTD|I Chain I, The Crystal Structures Of The Complexes Between The Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
Length = 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCDARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1ADZ|A Chain A, The Solution Structure Of The Second Kunitz Domain Of
Tissue Factor Pathway Inhibitor, Nmr, 30 Structures
Length = 71
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 498 LCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
CFLE + G C ++++ T +C+ F YGGC GN N F T E+C+ +C
Sbjct: 13 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
C G C Y+ ++Y++ +C +F YGGC GN NNF T E C+ C G
Sbjct: 13 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDG 67
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 428 IVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
I RG +++Y+ T C+ F+YGGC GN N F C+ C
Sbjct: 22 ICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 64
>pdb|1EJM|B Chain B, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|D Chain D, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
pdb|1EJM|F Chain F, Crystal Structure Of The Bpti Ala16leu Mutant In Complex
With Bovine Trypsin
Length = 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCRLRIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1YKT|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCA 99
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|1QLQ|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Mutant With
Altered Binding Loop Sequence
pdb|1G6X|A Chain A, Ultra High Resolution Structure Of Bovine Pancreatic
Trypsin Inhibitor (Bpti) Mutant With Altered Binding
Loop Sequence
pdb|1K6U|A Chain A, Crystal Structure Of Cyclic Bovine Pancreatic Trypsin
Inhibitor
Length = 58
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +G C + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +++Y+ CQ F YGGC+ N F C + C
Sbjct: 15 RARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1UUB|A Chain A, Solution Structure Of A Truncated Bovine Pancreatic
Trypsin Inhibitor Mutant, 3-58 Bpti (K15r, R17a, R42s)
Length = 56
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC NNF + E C C G
Sbjct: 1 DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCGG 55
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
D C +GPC ++++ CQ+F+YGGC +N F + E C R CG
Sbjct: 1 DFCLEPPYTGPCRAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTCG 54
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R +++Y+ CQ F YGGC+ N F C + C
Sbjct: 13 RAAIIRYFYNAKAGLCQTFVYGGCRAKSNNFKSAEDCMRTC 53
>pdb|1FAK|I Chain I, Human Tissue Factor Complexed With Coagulation Factor
Viia Inhibited With A Bpti-Mutant
Length = 55
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 44 AKDICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
A D CL+P G C L ++Y++ C+ FYYGGC +NNF + E C C
Sbjct: 1 APDFCLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
D C GPC ++++ CQ+F YGGC N F + E C R C
Sbjct: 3 DFCLEPPYDGPCRALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
R + +++Y+ CQ F YGGC N F C + C
Sbjct: 15 RALHLRYFYNAKAGLCQTFYYGGCLAKRNNFESAEDCMRTC 55
>pdb|3BTW|I Chain I, The Crystal Structures Of The Complexes Between Bovine
Beta- Trypsin And Ten P1 Variants Of Bpti
pdb|1T8O|B Chain B, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
pdb|1T8O|D Chain D, Crystal Structure Of The P1 Trp Bpti Mutant- Bovine
Chymotrypsin Complex
Length = 58
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCGG 57
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCWARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTCG 56
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>pdb|1BTI|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ + Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + + ++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
++ Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYAYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|3JXA|A Chain A, Immunoglobulin Domains 1-4 Of Mouse Cntn4
pdb|3JXA|B Chain B, Immunoglobulin Domains 1-4 Of Mouse Cntn4
Length = 383
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGI 408
TV AE+G V L C A+G P+P W + + + +G+L+I ++DAG
Sbjct: 213 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKS-NGILEIPNFQQEDAGS 271
Query: 409 YVCVAANGIGDPIRK 423
Y CVA N G + K
Sbjct: 272 YECVAENSRGKNVAK 286
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVR-QDAG 407
+++EE V L C G P P W +D G D Y + +DG L I + QDAG
Sbjct: 18 LDSEEKK-VKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSV-VDGSLLINNPNKTQDAG 75
Query: 408 IYVCVAANGIGDPIRKE 424
Y C+A N G + +E
Sbjct: 76 TYQCIATNSFGTIVSRE 92
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 132 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE---VSRK 165
TV AE+G V L C A+G P+P W + + ++RK
Sbjct: 213 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK 249
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD------GVLQIVGLVR 403
V EE F C A G P P Y W K +G LT D G L I +
Sbjct: 306 VAMEESVF--WECKANGRPKPTYRWLK--------NGDPLLTRDRIQIEQGTLNITIVNL 355
Query: 404 QDAGIYVCVAANGIG 418
DAG+Y CVA N G
Sbjct: 356 SDAGMYQCVAENKHG 370
>pdb|1JV8|A Chain A, Nmr Structure Of Bpti Mutant G37a
pdb|1JV9|A Chain A, Nmr Structure Of Bpti Mutant G37a
Length = 58
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
D CL+P G C ++ ++Y++ C+ F YG C +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTCGGA 58
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YG C N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTCG 56
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YG C+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGACRAKRNNFKSAEDCMRTC 55
>pdb|1DTK|A Chain A, The Nmr Solution Structure Of Dendrotoxin K From The Venom
Of Dendroaspis Polylepis Polylepis
Length = 57
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 499 CFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
C L GPC ++ ++Y+ +C F Y GC GNANRF T E+C R C
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
C P IG C + ++YY +C F Y GCGGN N F T E C+ C G
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCVG 57
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
+YY C PF Y GC GN NRF C++ CV
Sbjct: 21 FYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56
>pdb|3KLD|A Chain A, Ptprg Cntn4 Complex
Length = 384
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGI 408
TV AE+G V L C A+G P+P W + + + +G+L+I ++DAG
Sbjct: 214 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKS-NGILEIPNFQQEDAGS 272
Query: 409 YVCVAANGIGDPIRK 423
Y CVA N G + K
Sbjct: 273 YECVAENSRGKNVAK 287
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVR-QDAG 407
+++EE V L C G P P W +D G D Y + +DG L I + QDAG
Sbjct: 19 LDSEEKK-VKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSV-VDGSLLINNPNKTQDAG 76
Query: 408 IYVCVAANGIGDPIRKE 424
Y C+A N G + +E
Sbjct: 77 TYQCIATNSFGTIVSRE 93
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 132 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGE---VSRK 165
TV AE+G V L C A+G P+P W + + ++RK
Sbjct: 214 TVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK 250
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 16/75 (21%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD------GVLQIVGLVR 403
V EE F C A G P P Y W K +G LT D G L I +
Sbjct: 307 VAMEESVF--WECKANGRPKPTYRWLK--------NGDPLLTRDRIQIEQGTLNITIVNL 356
Query: 404 QDAGIYVCVAANGIG 418
DAG+Y CVA N G
Sbjct: 357 SDAGMYQCVAENKHG 371
>pdb|1NAG|A Chain A, Crevice-forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC + NF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTCGG 57
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTCG 56
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRGNFKSAEDCMRTC 55
>pdb|2FI4|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser) In
Complex With Trypsin
Length = 58
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G ++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GP + ++++ CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|2FI5|I Chain I, Crystal Structure Of A Bpti Variant (Cys38->ser) In
Complex With Trypsin
Length = 58
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGG +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGG 57
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGG N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCG 56
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGG + N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|1BPT|A Chain A, Crevice-Forming Mutants Of Bpti: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++ ++ C+ F YGGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 57
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++ + CQ+F+YGGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 56
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++ + CQ F YGGC+ N F C + C
Sbjct: 20 RYFANAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 55
>pdb|2V9Q|A Chain A, First And Second Ig Domains From Human Robo1
pdb|2V9R|A Chain A, First And Second Ig Domains From Human Robo1 (Form 2)
Length = 212
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----EVSIDGSDGHYKLTLDG 394
PPR + + +G TL C A G P P W KG E D H L G
Sbjct: 9 PPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 395 VLQIVGLV-----RQDAGIYVCVAANGIGDPIRKEFNV---IVRGNYEQ 435
L + +V R D G+YVCVA N +G+ + + ++ I+R ++ Q
Sbjct: 68 SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQ 116
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 366 GYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
G+P P +W K +D D + G L I + DAG YVCV N +G+
Sbjct: 138 GHPEPTISWKKDGSPLDDKDERITIR-GGKLMITYTRKSDAGKYVCVGTNMVGE 190
>pdb|1FAN|A Chain A, Crevice-Forming Mutants In The Rigid Core Of Bovine
Pancreatic Trypsin Inhibitor: Crystal Structures Of
F22a, Y23a, N43g, And F45a
Length = 58
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F YGGC +NN + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTCGG 57
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+YGGC N + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTCG 56
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNAKSAEDCMRTC 55
>pdb|3LAF|A Chain A, Structure Of Dcc, A Netrin-1 Receptor
Length = 403
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 125/342 (36%), Gaps = 66/342 (19%)
Query: 94 CQARCAGGTFVTSSAAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIP 153
C+A + S A ++ VA P RF + +E ++ A G+ V L+C IG P+P
Sbjct: 99 CEASLGDSGSIISRTA------KVMVAGPLRFLSQTE-SITAFMGDTVLLKCEVIGDPMP 151
Query: 154 VYTWSKGEV--------SRKFFL-RGFISANDLCFLESESGPCTQQEAAWYFDRNS---- 200
W K + SR L G + + L +S C+ + A N
Sbjct: 152 TIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVR 211
Query: 201 FITMPELTPNTFLFQW---TCVISGKNARCRCFNPCQNQDPQCPSNTRCAVDLVRNPETR 257
++ P L + Q I GK+A C C + P PS T + V ++
Sbjct: 212 ILSDPGLHRQLYFLQRPSNVIAIEGKDAVLEC---CVSGYPP-PSFTWLRGEEVIQLRSK 267
Query: 258 ETQYIAVCRPLYKEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSNLFDIXXXX 317
+ + N+ N DD T Y+C +
Sbjct: 268 KYSLLG--------------GSNLLISNVTDDDSGT-----------YTCV----VTYKN 298
Query: 318 XXVSPAYPVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 377
+S + + P P F N+ + A E + C G P+P W K
Sbjct: 299 ENISASAELTVLVP--------PWFLNHPS-NLYAYESMDIEFECAVSGKPVPTVNWMKN 349
Query: 378 EVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
+ SD ++++ L+I+G+V+ D G Y CVA N G+
Sbjct: 350 GDVVIPSD-YFQIVGGSNLRILGVVKSDEGFYQCVAENEAGN 390
>pdb|2FTM|B Chain B, Crystal Structure Of Trypsin Complexed With The Bpti
Variant (Tyr35- >gly)
pdb|8PTI|A Chain A, Crystal Structure Of A Y35g Mutant Of Bovine Pancreatic
Trypsin Inhibitor
Length = 58
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ C+ F GGC +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTCGG 57
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ CQ+F+ GGC N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTCG 56
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F GGC+ N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVGGGCRAKRNNFKSAEDCMRTC 55
>pdb|2EO9|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human
Roundabout Homo1
Length = 118
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVC 411
A +G FV L C+A G P+P W K V + D K +GVLQI D G Y C
Sbjct: 21 AVDGTFV-LSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTC 79
Query: 412 VAANGIGD 419
+A+ G+
Sbjct: 80 IASTPSGE 87
>pdb|1BF0|A Chain A, Calcicludine (Cac) From Green Mamba Dendroaspis
Angusticeps, Nmr, 15 Structures
Length = 60
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
C +P IG C ++Y+ +C F + GCGGN N F T C+ +C G
Sbjct: 7 CKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCLG 59
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 506 GPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
G C +Q +++YF +C F++ GC GNANRF T +C + C
Sbjct: 14 GSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
+ + +Y+ C PF + GC GN NRF C+K+C+
Sbjct: 17 KKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58
>pdb|2IEP|A Chain A, Crystal Structure Of Immunoglobulin-Like Domains 1 And 2
Of The Receptor Tyrosine Kinase Musk
pdb|2IEP|B Chain B, Crystal Structure Of Immunoglobulin-Like Domains 1 And 2
Of The Receptor Tyrosine Kinase Musk
Length = 192
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 331 PYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL 390
P P I +P TV+A T C YP P +W++ ++ I D Y +
Sbjct: 5 PKAPVITTPLE-------TVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSI 57
Query: 391 TLDG-VLQIVGLVRQDAGIYVCVAANGIGDPI 421
+G +L I+ + D GIY C A NG+G +
Sbjct: 58 RENGQLLTILSVEDSDDGIYCCTANNGVGGAV 89
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
P I PP V+ EG L C +G P P +W KG+ ++ + +
Sbjct: 101 PKITRPP-------INVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALR-ENSRIAVLES 152
Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRK 423
G L+I + ++DAG Y CVA N +G K
Sbjct: 153 GSLRIHNVQKEDAGQYRCVAKNSLGTAYSK 182
>pdb|2J8H|A Chain A, Structure Of The Immunoglobulin Tandem Repeat A168-A169 Of
Titin
pdb|2J8O|A Chain A, Structure Of The Immunoglobulin Tandem Repeat Of Titin
A168- A169
pdb|2J8O|B Chain B, Structure Of The Immunoglobulin Tandem Repeat Of Titin
A168- A169
Length = 197
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQD 405
V A G V+++ G P PV TW KG+ ID ++GHY++ + ++ G+ R+D
Sbjct: 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 172
Query: 406 AGIYVCVAANGIG 418
AG YV A N G
Sbjct: 173 AGFYVVCAKNRFG 185
>pdb|2ILL|A Chain A, Anomalous Substructure Of Titin-A168169
Length = 195
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKL----TLDGVLQIVGLVRQD 405
V A G V+++ G P PV TW KG+ ID ++GHY++ + ++ G+ R+D
Sbjct: 112 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 170
Query: 406 AGIYVCVAANGIG 418
AG YV A N G
Sbjct: 171 AGFYVVCAKNRFG 183
>pdb|2V9T|A Chain A, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 117
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG----EVSIDGSDGHYKLTLDG 394
PPR + + +G TL C A G P P W KG E D H L G
Sbjct: 9 PPRIVEHPSDLI-VSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 395 VLQIVGLV-----RQDAGIYVCVAANGIGDPIRKE 424
L + +V R D G+YVCVA N +G+ + +
Sbjct: 68 SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHD 102
>pdb|1AAL|A Chain A, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
pdb|1AAL|B Chain B, Structural Effects Induced By Mutagenesis Affected By
Crystal Packing Factors: The Structure Of A 30-51
Disulfide Mutant Of Basic Pancreatic Trypsin Inhibitor
Length = 58
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ + F YGGC +NNF + E C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTCGG 57
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ Q+F+YGGC N F + E R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLVQTFVYGGCRAKRNNFKSAEDAMRTCG 56
>pdb|7PTI|A Chain A, Structural Effects Induced By Removal Of A Disulfide
Bridge. The X-Ray Structure Of The C30a(Slash)c51a
Mutant Of Basic Pancreatic Trypsin Inhibitor At 1.6
Angstroms
Length = 58
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G C ++ ++Y++ + F YGGC +NNF + E C G
Sbjct: 3 DFCLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTCGG 57
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GPC + ++++ Q+F+YGGC N F + E R CG
Sbjct: 1 RPDFCLEPPYTGPCKARIIRYFYNAKAGLAQTFVYGGCRAKRNNFKSAEDAMRTCG 56
>pdb|2OM5|A Chain A, N-Terminal Fragment Of Human Tax1
Length = 381
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 5/111 (4%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
G VTL C A G P+P W K +DGS T + LQI + +D G Y C A
Sbjct: 221 GQQVTLECFAFGNPVPRIKWRK----VDGSLSPQWTTAEPTLQIPSVSFEDEGTYECEAE 276
Query: 415 NGIG-DPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQW 464
N G D ++ V + + + D + D ++G R +W
Sbjct: 277 NSKGRDTVQGRIIVQAQPEWLKVISDTEADIGSNLRWGCAAAGKPRPTVRW 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVR-QDAGIYVCVAANG 416
V L C A P Y W + G + G L I+ + QDAG+Y C+A+N
Sbjct: 24 VLLACRARASPPATYRWKMNGTEMKLEPGSRHQLVGGNLVIMNPTKAQDAGVYQCLASNP 83
Query: 417 IGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGGCQ 454
+G + +E I+R + Q + + D + + G
Sbjct: 84 VGTVVSRE--AILRFGFLQEFSKEERDPVKAHEGWGVM 119
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
EA+ G+ + C A G P P W + + S ++ L G L+ L +D+G+Y
Sbjct: 304 EADIGSNLRWGCAAAGKPRPTVRWLRNGEPL-ASQNRVEV-LAGDLRFSKLSLEDSGMYQ 361
Query: 411 CVAANGIG 418
CVA N G
Sbjct: 362 CVAENKHG 369
>pdb|2FI3|I Chain I, Crystal Structure Of A Bpti Variant (Cys14->ser,
Cys38->ser) In Complex With Trypsin
Length = 58
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G ++ ++Y++ C+ F YGG +NNF + E C C G
Sbjct: 3 DFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCGG 57
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GP + ++++ CQ+F+YGG N F + E C R CG
Sbjct: 1 RPDFCLEPPYTGPSKARIIRYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTCG 56
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGG + N F C + C
Sbjct: 20 RYFYNAKAGLCQTFVYGGSRAKRNNFKSAEDCMRTC 55
>pdb|2NZI|A Chain A, Crystal Structure Of Domains A168-A170 From Titin
pdb|2NZI|B Chain B, Crystal Structure Of Domains A168-A170 From Titin
Length = 305
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIV----GLVRQD 405
V A G V+++ G P PV TW KG+ ID ++GHY++ + + G+ R+D
Sbjct: 114 VHALRGEVVSIKIPFSGKPDPVITWQKGQDLID-NNGHYQVIVTRSFTSLVFPNGVERKD 172
Query: 406 AGIYVCVAANGIG 418
AG YV A N G
Sbjct: 173 AGFYVVCAKNRFG 185
>pdb|3PXH|A Chain A, Tandem Ig Domains Of Tyrosine Phosphatase Lar
Length = 201
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
E+G T+ C A G P P +W K + +D S+G K G LQI D G Y
Sbjct: 122 EKGRTATMLCAAGGNPDPEISWFKDFLPVDPAASNGRIKQLRSGALQIESSEESDQGKYE 181
Query: 411 CVAANGIGDPIRKEFNVIVR 430
CVA N G N+ VR
Sbjct: 182 CVATNSAGTRYSAPANLYVR 201
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGL-VRQDAGIYV 410
G + C A G P P TW K + DG VL+I L V++D IY
Sbjct: 22 GGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYE 81
Query: 411 CVAANGIGD 419
C A N +G+
Sbjct: 82 CTATNSLGE 90
>pdb|1BUN|B Chain B, Structure Of Beta2-Bungarotoxin: Potassium Channel
Binding By Kunitz Modules And Targeted Phospholipase
Action
Length = 61
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
C +P C V +YY RC QF YGGC GN N+F ++ C+ C
Sbjct: 7 CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCEC 57
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 514 AWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCGEFR 553
A+Y+ + RC F YGGC GN N F ++ C C E+R
Sbjct: 22 AFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLEYR 61
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCVQ 472
+YY C F+YGGC GN N F C+ C++
Sbjct: 23 FYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECLE 59
>pdb|3P3Y|A Chain A, Crystal Structure Of Neurofascin Homophilic Adhesion
Complex In Space Group P6522
pdb|3P40|A Chain A, Crystal Structure Of Neurofascin Adhesion Complex In Space
Group P3221
Length = 404
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
G + L CIA G P P W K + ++ + L+I + +D+G Y C+A+
Sbjct: 237 GMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFE-NFNKALRITNVSEEDSGEYFCLAS 295
Query: 415 NGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGG--CQGNHN-RFNDQWSCQKRCV 471
N +G IR +V V+ W + P + G C+ N N + QW +
Sbjct: 296 NKMGS-IRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPL 353
Query: 472 QNIPPPDPAQTPSTTLAPRQEAARNDLCFLESE 504
Q+ PP P +E A + + F +++
Sbjct: 354 QSAPP-----------NPNREVAGDTIIFRDTQ 375
>pdb|2EDJ|A Chain A, Solution Structure Of The Fifth Ig-Like Domain From Human
Roundabout Homolog 2
Length = 100
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 360 LRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIGD 419
L+C A G P+PV +W K + G D + G LQI L D G Y CVA + G+
Sbjct: 28 LKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGE 87
>pdb|1BRB|I Chain I, Crystal Structures Of Rat Anionic Trypsin Complexed With
The Protein Inhibitors Appi And Bpti
Length = 58
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGT 102
D +P G C ++ ++Y++ C+ F YGGC +NNF + E C R AGG
Sbjct: 3 DFAGEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCM-RTAGGA 58
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 505 SGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
+GPC + ++++ CQ+F+YGGC N F + E C R G
Sbjct: 11 TGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTAG 56
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQK 468
+++Y+ CQ F YGGC+ N F C +
Sbjct: 20 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMR 53
>pdb|2WP3|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex
pdb|2WWM|C Chain C, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
pdb|2WWM|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
Length = 109
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
SPP F + P V G L+C+ +G P PV W KG + S+ DG
Sbjct: 13 SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEH 70
Query: 396 -LQIVGLVRQDAGIYVCVAAN 415
L + + DAG+YVC A N
Sbjct: 71 GLLLTAALPTDAGVYVCRARN 91
Score = 33.1 bits (74), Expect = 0.43, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 120 ASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
SPP F + P V G L+C+ +G P PV W KG
Sbjct: 12 GSPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG 51
>pdb|3KNB|B Chain B, Crystal Structure Of The Titin C-Terminus In Complex With
Obscurin- Like 1
Length = 107
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
SPP F + P V G L+C+ +G P PV W KG + S+ DG
Sbjct: 12 SPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEH 69
Query: 396 -LQIVGLVRQDAGIYVCVAAN 415
L + + DAG+YVC A N
Sbjct: 70 GLLLTAALPTDAGVYVCRARN 90
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 120 ASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
SPP F + P V G L+C+ +G P PV W KG
Sbjct: 11 GSPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG 50
>pdb|1BIH|A Chain A, Crystal Structure Of The Insect Immune Protein Hemolin: A
New Domain Arrangement With Implications For Homophilic
Adhesion
pdb|1BIH|B Chain B, Crystal Structure Of The Insect Immune Protein Hemolin: A
New Domain Arrangement With Implications For Homophilic
Adhesion
Length = 395
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV 395
+ S P++ E + ++G VT+ C G P P WS + G G +T D
Sbjct: 305 VVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSG--GRATVT-DSG 361
Query: 396 LQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGN 432
L I G+ D G Y C A N GD K F +V+ N
Sbjct: 362 LVIKGVKNGDKGYYGCRATNEHGD---KYFETLVQVN 395
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 108 AAPDQLENRIAVASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWS 158
P + ++ V S P++ E + ++G VT+ C G P P WS
Sbjct: 294 GKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWS 344
>pdb|2YD3|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Sigma
Length = 202
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIY 409
E T+ C A G P P TW K + +D S+G K G LQI D G Y
Sbjct: 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179
Query: 410 VCVAANGIGDPIRKEFNVIVR 430
CVA N G N+ VR
Sbjct: 180 ECVATNSAGVRYSSPANLYVR 200
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG---SDGHYKLTLDGV 395
PPRF + + G + C A G P P TW+K ++ + + V
Sbjct: 6 PPRFIKEPKDQI-GVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 396 LQIVGL-VRQDAGIYVCVAANGIGD 419
L+I L +D +Y CVA N +G+
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGE 89
>pdb|1CS6|A Chain A, N-terminal Fragment Of Axonin-1 From Chicken
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVC 411
A G VTL C A G P+P W K +DGS L+ + +L I + +D G Y C
Sbjct: 219 ALTGQMVTLECFAFGNPVPQIKWRK----LDGSQTSKWLSSEPLLHIQNVDFEDEGTYEC 274
Query: 412 VAANGIG 418
A N G
Sbjct: 275 EAENIKG 281
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSID-GSDGHYKLTLDGVLQIVGLVR-QD 405
P AEE VTL C A P Y W + G D Y+L + G L I V+ +D
Sbjct: 17 PEGSAEEK--VTLTCRARANPPATYRWKMNGTELKMGPDSRYRL-VAGDLVISNPVKAKD 73
Query: 406 AGIYVCVAANGIGDPIRKEFNV 427
AG Y CVA N G + +E ++
Sbjct: 74 AGSYQCVATNARGTVVSREASL 95
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTW--------SKGEVSIDGSDGHYKLTLDGVLQIVGLV 402
EA+ G+ + C+A G P P W S+ + + G G L+ LV
Sbjct: 305 EADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSG----------GELRFSKLV 354
Query: 403 RQDAGIYVCVAANGIG 418
+D+G+Y CVA N G
Sbjct: 355 LEDSGMYQCVAENKHG 370
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 135 AEEGNFVTLRCIAIGYPIPVYTWSK 159
A G VTL C A G P+P W K
Sbjct: 219 ALTGQMVTLECFAFGNPVPQIKWRK 243
>pdb|2YD2|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Sigma
Length = 214
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIY 409
E T+ C A G P P TW K + +D S+G K G LQI D G Y
Sbjct: 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179
Query: 410 VCVAANGIGDPIRKEFNVIVR 430
CVA N G N+ VR
Sbjct: 180 ECVATNSAGVRYSSPANLYVR 200
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG---SDGHYKLTLDGV 395
PPRF + + G + C A G P P TW+K ++ + + V
Sbjct: 6 PPRFIKEPKDQIGVS-GGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 396 LQIVGL-VRQDAGIYVCVAANGIGD 419
L+I L +D +Y CVA N +G+
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGE 89
>pdb|2KCR|A Chain A, Solution Structure Of Anntoxin
Length = 61
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 431 GNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
G++ +YYD+ T SC+ F+Y G GN NRF C+ CV
Sbjct: 18 GSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATCV 58
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 494 ARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
A++ C L G + +Y+D+ T C++F Y G GN NRF T E CE C
Sbjct: 2 AQDYRCQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATC 57
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 48 CLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
C G + +YYD + C+ F Y G GGN N F T E C+A C
Sbjct: 7 CQLSRNYGKGSGSFTNYYYDKATSSCKTFRYRGSGGNGNRFKTLEDCEATC 57
>pdb|2V5S|A Chain A, Structural Basis For Dscam Isoform Specificity
pdb|2V5S|B Chain B, Structural Basis For Dscam Isoform Specificity
Length = 394
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 19/101 (18%)
Query: 325 PVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS 384
P+ +S P TP + P +E + ++L C A G+P P + W K I+G+
Sbjct: 212 PISSSAPRTPALVQKP---------LELMVAHTISLLCPAQGFPAPSFRWYK---FIEGT 259
Query: 385 DGHYKLTLD-------GVLQIVGLVRQDAGIYVCVAANGIG 418
+ L+ G L I V +D+G Y+CV N +G
Sbjct: 260 TRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVG 300
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG 407
PT + G C G PI +W K +I GH + VL+I + ++D G
Sbjct: 321 PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAI----GHS----ESVLRIESVKKEDKG 372
Query: 408 IYVCVAAN 415
+Y C N
Sbjct: 373 MYQCFVRN 380
>pdb|3DMK|A Chain A, Crystal Structure Of Down Syndrome Cell Adhesion Molecule
(Dscam) Isoform 1.30.30, N-Terminal Eight Ig Domains
pdb|3DMK|B Chain B, Crystal Structure Of Down Syndrome Cell Adhesion Molecule
(Dscam) Isoform 1.30.30, N-Terminal Eight Ig Domains
pdb|3DMK|C Chain C, Crystal Structure Of Down Syndrome Cell Adhesion Molecule
(Dscam) Isoform 1.30.30, N-Terminal Eight Ig Domains
Length = 816
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 335 NIPSPPRFHNYSEPTVEA-EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYK---- 389
N+ PPR+ EPT +A +G+ + C A G+P P TW K ++ + G YK
Sbjct: 710 NVYVPPRW--ILEPTDKAFAQGSDAKVECKADGFPKPQVTWKK---AVGDTPGEYKDLKK 764
Query: 390 ----LTLDGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRG 431
+G L + + + + G Y+C A NGIG + + V+
Sbjct: 765 SDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMISVQA 810
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 358 VTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-------GVLQIVGLVRQDAGIYV 410
+ L C A GYP+PV+ W K I+G+ + L+ G L I V +D+G Y+
Sbjct: 266 MALLCPAQGYPVPVFRWYK---FIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYL 322
Query: 411 CVAANGIG 418
CV N +G
Sbjct: 323 CVVNNSVG 330
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDG----VLQIVGLVRQ 404
E G V L+C+A G P P +W I +D G Y +T++G L I +
Sbjct: 442 EPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQY-VTVNGDVVSYLNITSVHAN 500
Query: 405 DAGIYVCVAANGIG 418
D G+Y C+A + +G
Sbjct: 501 DGGLYKCIAKSKVG 514
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 83 GNQNNFMTEEACQARCAGGT--FVTSSAAPDQLENRIAVASPPRFHNYSEPTVEA-EEGN 139
G + + +T EA +A AG + A Q + V PPR+ EPT +A +G+
Sbjct: 673 GRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRW--ILEPTDKAFAQGS 730
Query: 140 FVTLRCIAIGYPIPVYTWSKG 160
+ C A G+P P TW K
Sbjct: 731 DAKVECKADGFPKPQVTWKKA 751
>pdb|2V5M|A Chain A, Structural Basis For Dscam Isoform Specificity
Length = 388
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 19/101 (18%)
Query: 325 PVYTSTPYTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGS 384
P+ +S P TP + P +E + ++L C A G+P P + W K I+G+
Sbjct: 206 PISSSAPRTPALVQKP---------LELMVAHTISLLCPAQGFPAPSFRWYK---FIEGT 253
Query: 385 DGHYKLTLD-------GVLQIVGLVRQDAGIYVCVAANGIG 418
+ L+ G L I V +D+G Y+CV N +G
Sbjct: 254 TRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVG 294
>pdb|2YD4|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of
Chicken Receptor Protein Tyrosine Phosphatase Sigma
Length = 210
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Query: 339 PPRFHNYSE-PTVEA-EEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDG 394
PP F N P ++ E T+ C A G P P TW K + +D S+G K G
Sbjct: 105 PPGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSTSNGRIKQLRSG 164
Query: 395 VLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVR 430
LQI D G Y CVA+N G N+ VR
Sbjct: 165 GLQIESSEETDQGKYECVASNSAGVRYSSPANLYVR 200
>pdb|2YD9|A Chain A, Crystal Structure Of The N-Terminal Ig1-3 Module Of Human
Receptor Protein Tyrosine Phosphatase Sigma
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIY 409
E T+ C A G P P TW K + +D S+G K G LQI D G Y
Sbjct: 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179
Query: 410 VCVAANGIGDPIRKEFNVIVR 430
CVA N G N+ VR
Sbjct: 180 ECVATNSAGVRYSSPANLYVR 200
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSD----GHYKLTLDGVLQIVGLVRQDA 406
E G V + C+A+G P+P W +G + D G L L V +D+
Sbjct: 216 EIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGRNVLELTDV--------KDS 267
Query: 407 GIYVCVAANGIG 418
Y CVA + +G
Sbjct: 268 ANYTCVAMSSLG 279
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Query: 339 PPRFHNYSEPTVE-AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDG---SDGHYKLTLDG 394
PPRF EP + G + C A G P P TW+K ++ + +
Sbjct: 6 PPRF--IKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGA 63
Query: 395 VLQIVGL-VRQDAGIYVCVAANGIGD 419
VL+I L +D +Y CVA N +G+
Sbjct: 64 VLRIQPLRTPRDENVYECVAQNSVGE 89
>pdb|2WWK|O Chain O, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig F17r
Mutant Complex
Length = 109
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV-- 395
SPP F P V G L+C+ +G P PV W KG + S+ DG
Sbjct: 13 SPPCFLRRPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE-RLSFPADGAEH 70
Query: 396 -LQIVGLVRQDAGIYVCVAAN 415
L + + DAG+YVC A N
Sbjct: 71 GLLLTAALPTDAGVYVCRARN 91
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 120 ASPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKG 160
SPP F P V G L+C+ +G P PV W KG
Sbjct: 12 GSPPCFLRRPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG 51
>pdb|2YD5|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Lar
pdb|2YD8|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Lar In Complex
With Sucrose Octasulphate
Length = 214
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSID--GSDGHYKLTLDGVLQIVGLVRQDAGIYV 410
E+ T+ C A G P P +W K + +D S+G K G LQI D G Y
Sbjct: 121 EKARTATMLCAAGGNPDPEISWFKDFLPVDPATSNGRIKQLRSGALQIESSEESDQGKYE 180
Query: 411 CVAANGIGDPIRKEFNVIVR 430
CVA N G N+ VR
Sbjct: 181 CVATNSAGTRYSAPANLYVR 200
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGL-VRQDAGIYV 410
G + C A G P P TW K + DG VL+I L V++D IY
Sbjct: 21 GGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIEFDDGAGSVLRIQPLRVQRDEAIYE 80
Query: 411 CVAANGIGD 419
C A N +G+
Sbjct: 81 CTATNSLGE 89
>pdb|1IE5|A Chain A, Nmr Structure Of The Third Immunoglobulin Domain From The
Neural Cell Adhesion Molecule
Length = 107
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGH--YKLTL 392
N+P R S A VTL C A G+P P TW+K I+ D Y
Sbjct: 9 NVPPSVRARQ-STMNATANLSQSVTLACDADGFPEPTMTWTKDGEPIEQEDNEEKYSFNY 67
Query: 393 DGVLQIVGLV-RQDAGIYVCVAANGIGD 419
DG I+ V + D Y+C+A N G+
Sbjct: 68 DGSELIIKKVDKSDEAEYICIAENKAGE 95
>pdb|1ZLG|A Chain A, Solution Structure Of The Extracellular Matrix Protein
Anosmin-1
Length = 680
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 7/46 (15%)
Query: 268 LYKEGECRPQPQNV------CADNCKDDADCTGQAKCCPNDCGYSC 307
L K+G+C P P+ C ++C+ D +C+G KCC N CG++C
Sbjct: 105 LVKQGDC-PAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTC 149
>pdb|2XY1|A Chain A, Crystal Structure Of Ncam2 Ig3-4
Length = 192
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
P I P + N + AE G +T C A G P P +W + I+ ++ + +
Sbjct: 3 PAISMPQKSFNAT-----AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 57
Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF 425
L + ++ D G YVC A N G+ ++ F
Sbjct: 58 TELTVRNIINSDGGPYVCRATNKAGEDEKQAF 89
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVG-----------LV 402
E VTL C A G PIP TW + ++G +LDG +++ G +
Sbjct: 108 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDK--SLDGRIEVKGQHGSSSLHIKDVK 165
Query: 403 RQDAGIYVCVAANGIG 418
D+G Y C AA+ IG
Sbjct: 166 LSDSGRYDCEAASRIG 181
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 341 RFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--DGVLQI 398
R + V +EG+ V C A G P P W + + + +LT+ DG L++
Sbjct: 386 RIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEV 445
Query: 399 VGLVRQDAGIYVCVAANGIGD 419
QD G Y+C+AAN G+
Sbjct: 446 RYAQVQDNGTYLCIAANAGGN 466
>pdb|2V5T|A Chain A, Crystal Structure Of Ncam2 Ig2-3
Length = 189
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
P I P + N + AE G +T C A G P P +W + I+ ++ + +
Sbjct: 97 PAISMPQKSFNAT-----AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 151
Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF 425
L + ++ D G YVC A N G+ ++ F
Sbjct: 152 TELTVRNIINSDGGPYVCRATNKAGEDEKQAF 183
>pdb|2YD6|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Delta
pdb|2YD7|A Chain A, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Delta
pdb|2YD7|B Chain B, Crystal Structure Of The N-Terminal Ig1-2 Module Of Human
Receptor Protein Tyrosine Phosphatase Delta
Length = 212
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 5/85 (5%)
Query: 352 AEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL-----DGVLQIVGLVRQDA 406
E T+ C A G P P TW K + +D S+ + ++ G LQI D
Sbjct: 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQ 179
Query: 407 GIYVCVAANGIGDPIRKEFNVIVRG 431
G Y CVA N G N+ VRG
Sbjct: 180 GKYECVATNSAGTRYSAPANLYVRG 204
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 5/86 (5%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
+PPRF G + C A G P P W+K + DG
Sbjct: 5 TPPRFTRTPVDQT-GVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGS 63
Query: 395 VLQIVGL-VRQDAGIYVCVAANGIGD 419
VL+I L +D IY CVA+N +G+
Sbjct: 64 VLRIQPLRTPRDEAIYECVASNNVGE 89
>pdb|1LD6|A Chain A, Structure Of Bpti_8a Mutant
Length = 58
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
D CL+P G C ++Y++ C+ F YG C +NNF + E C C G
Sbjct: 3 DFCLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTCGGA 58
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +G C A ++++ CQ+F YG C N F + E C R CG
Sbjct: 1 RPDFCLEPPYAGACRAAAARYFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTCG 56
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 436 WYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
++Y+ CQ F YG C N F C + C
Sbjct: 21 YFYNAKAGLCQTFAYGACAAKRNNFKSAEDCLRTC 55
>pdb|1YLD|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEE 92
D L+P G C ++ ++Y++ + + F YGGC +NNF + E
Sbjct: 3 DFXLEPPYTGPCKARIIRYFYNAPDGLXQTFVYGGCRAKRNNFKSAE 49
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D +GPC + ++++ Q+F+YGGC N F + E R G
Sbjct: 1 RPDFXLEPPYTGPCKARIIRYFYNAPDGLXQTFVYGGCRAKRNNFKSAEDXMRTXG 56
>pdb|2WIM|A Chain A, Crystal Structure Of Ncam2 Ig1-3
pdb|2WIM|B Chain B, Crystal Structure Of Ncam2 Ig1-3
Length = 291
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 334 PNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD 393
P I P + N + AE G +T C A G P P +W + I+ ++ + +
Sbjct: 193 PAISMPQKSFNAT-----AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN 247
Query: 394 GVLQIVGLVRQDAGIYVCVAANGIGDPIRKEF 425
L + ++ D G YVC A N G+ ++ F
Sbjct: 248 TELTVRNIINSDGGPYVCRATNKAGEDEKQAF 279
>pdb|2KDG|A Chain A, Solution Structure Of The 1st Ig Domain Of Myotilin
Length = 100
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQ- 397
PPRF E + +EG F + G P P +W ++ D H + + L
Sbjct: 5 PPRFIQVPE-NMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHS 63
Query: 398 -IVGLVR-QDAGIYVCVAANGIGD 419
I +VR DAG Y CVA N G+
Sbjct: 64 LIFEVVRASDAGAYACVAKNRAGE 87
>pdb|3LCY|A Chain A, Titin Ig Tandem Domains A164-A165
pdb|3LCY|B Chain B, Titin Ig Tandem Domains A164-A165
pdb|3LCY|C Chain C, Titin Ig Tandem Domains A164-A165
pdb|3LCY|D Chain D, Titin Ig Tandem Domains A164-A165
Length = 197
Score = 38.1 bits (87), Expect = 0.013, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSK-GEVSIDGSDGHYKLTLDG---VLQIVGLVRQD 405
V + G L C +G P+P W + G+ I YK++ DG L ++ ++D
Sbjct: 17 VTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRK--YKMSSDGRTHTLTVMTEEQED 74
Query: 406 AGIYVCVAANGIGD 419
G+Y C+A N +G+
Sbjct: 75 EGVYTCIATNEVGE 88
>pdb|1YLC|B Chain B, TrypsinBPTI COMPLEX MUTANT
Length = 56
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEE 92
D L+P G C ++ ++Y++ + F YGGC +NNF + E
Sbjct: 3 DFXLEPPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNFKSAE 49
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D +GPC + ++++ Q+F+YGGC N F + E R G
Sbjct: 1 RPDFXLEPPYTGPCKARIIRYFYNAKAGLXQTFVYGGCRAKRNNFKSAEDXMRTXG 56
>pdb|2ZJX|A Chain A, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
pdb|2ZJX|B Chain B, Bovine Pancreatic Trypsin Inhibitor (Bpti) Containing Only
The [5,55] Disulfide Bond
Length = 58
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G ++ ++Y++ + F YGG +NNF + E C G
Sbjct: 3 DFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTCGG 57
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GP + ++++ Q+F+YGG N F + E R CG
Sbjct: 1 RPDFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGARAKRNNFKSAEDALRTCG 56
>pdb|2ZVX|A Chain A, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
pdb|2ZVX|B Chain B, Structure Of A Bpti-[5,55] Variant Containing GlyVAL AT
THE 1438TH POSITIONS
Length = 58
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
D CL+P G ++ ++Y++ + F YGG +NNF + E C G
Sbjct: 3 DFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGVRAKRNNFKSAEDALRTCGG 57
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
R D C +GP + ++++ Q+F+YGG N F + E R CG
Sbjct: 1 RPDFCLEPPYTGPGKARIIRYFYNAKAGLAQTFVYGGVRAKRNNFKSAEDALRTCG 56
>pdb|3FP7|J Chain J, Anionic Trypsin Variant S195a In Complex With Bovine
Pancreatic Trypsin Inhibitor (Bpti) Cleaved At The
Scissile Bond (Lys15-Ala16) Determined To The 1.46 A
Resolution Limit
Length = 43
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 515 WYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLCG 550
++++ CQ+F+YGGC N F + E C R CG
Sbjct: 6 YFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG 41
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 61 VLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAG 100
++ ++Y++ C+ F YGGC +NNF + E C C G
Sbjct: 3 IIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCGG 42
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 435 QWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRC 470
+++Y+ CQ F YGGC+ N F C + C
Sbjct: 5 RYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTC 40
>pdb|2EDH|A Chain A, Solution Structure Of The Pdz Domain (3614- 3713 ) From
Human Obscurin
Length = 113
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG LRC + PV W KG ++ D H L DG LQI GLV +DAG
Sbjct: 30 EATEGATAVLRC-ELSKMAPV-EWWKGHETLRDGDRH-SLRQDGARCELQIRGLVAEDAG 86
Query: 408 IYVCV 412
Y+C+
Sbjct: 87 EYLCM 91
>pdb|3S97|C Chain C, Ptprz Cntn1 Complex
pdb|3S97|D Chain D, Ptprz Cntn1 Complex
Length = 201
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 18/77 (23%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSK--------GEVSIDGSDGHYKLTLDGVLQIVGL 401
V A G VTL C A+G P+P W K E+S G+ VL+I +
Sbjct: 123 VYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGA----------VLKIFNI 172
Query: 402 VRQDAGIYVCVAANGIG 418
+D GIY C A N G
Sbjct: 173 QLEDEGIYECEAENIRG 189
>pdb|2V5R|A Chain A, Structural Basis For Dscam Isoform Specificity
pdb|2V5R|B Chain B, Structural Basis For Dscam Isoform Specificity
Length = 391
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-------GVLQIVGLV 402
++ E + +L C+A YP P + W K I+G+ + L+ G L I V
Sbjct: 225 IDVELASSYSLLCMAQSYPTPSFRWYK---FIEGTTRKQAVVLNDRVKQVSGTLIIKDAV 281
Query: 403 RQDAGIYVCVAANGIG 418
+D+G Y+CV N +G
Sbjct: 282 VEDSGKYLCVVNNSVG 297
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 348 PTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAG 407
PT + G C G PI +W K +I GH + VL+I + ++D G
Sbjct: 318 PTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAI----GHS----ESVLRIESVKKEDKG 369
Query: 408 IYVCVAAN 415
+Y C N
Sbjct: 370 MYQCFVRN 377
>pdb|2EDL|A Chain A, Solution Structure Of The Ig-Like Domain (3801-3897) Of
Human Obscurin
Length = 110
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG L+C + PV W KG ++ G D Y L DG LQI GL D G
Sbjct: 19 EAREGATAVLQC-ELSKAAPVE-WRKGSETLRGGD-RYSLRQDGTRCELQIHGLSVADTG 75
Query: 408 IYVCV 412
Y CV
Sbjct: 76 EYSCV 80
>pdb|1Y62|A Chain A, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|B Chain B, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|C Chain C, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|D Chain D, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|E Chain E, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|1Y62|F Chain F, A 2.4 Crystal Structure Of Conkunitzin-S1, A Novel
Kunitz- Fold Cone Snail Neurotoxin.
pdb|2CA7|A Chain A, Conkunitzin-S1 Is The First Member Of A New Kunitz-Type
Neurotoxin Family- Structural And Functional
Characterization
Length = 60
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
+C PA G YY+S +C +F Y G GGN+NNF CQ C
Sbjct: 6 LCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 495 RNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
R LC L ++SG T+ E Y++ +C F Y G GN N F C+R C
Sbjct: 3 RPSLCDLPADSGSGTKAEKRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTC 57
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 434 EQWYYDRDTDSCQPFQYGGCQGNHNRFNDQWSCQKRCV 471
++ YY+ C F Y G GN N F + CQ+ C+
Sbjct: 21 KRIYYNSARKQCLRFDYTGQGGNENNFRRTYDCQRTCL 58
>pdb|2EDR|A Chain A, Solution Structure Of The Ig-Like Domain (3361-3449) Of
Human Obscurin
Length = 102
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
E+ EG TLRC + PV W KG S+ D H L DG LQI GL DAG
Sbjct: 19 ESIEGATATLRC-ELSKAAPV-EWRKGRESLRDGDRH-SLRQDGAVCELQICGLAVADAG 75
Query: 408 IYVCV 412
Y CV
Sbjct: 76 EYSCV 80
>pdb|2RJM|A Chain A, 3ig Structure Of Titin Domains I67-I69 E-To-A Mutated
Variant
Length = 284
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVL 396
P F + +V+ G T +C G TW+K I G+YK+TL L
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR-PGGNYKMTLVENTATL 63
Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
++ + + DAG Y C A+N G
Sbjct: 64 TVLKVTKGDAGQYTCYASNVAG 85
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--- 392
+ +PPRF EP+ ++ C G P W K E I S ++++
Sbjct: 95 VQAPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-SKFRMSFVES 153
Query: 393 DGVLQIVGLVRQDAGIYVCVAAN 415
VL++ L +D+G Y C A N
Sbjct: 154 VAVLEMYNLSVEDSGDYTCEAHN 176
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
+ PP F P VE +G V L C G P +W K + + S YK+ +
Sbjct: 188 KVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPFQVSWHKDKRELR-SGKKYKIMSEN 245
Query: 395 VL---QIVGLVRQDAGIYVCVAANGIG 418
L I+ + D G Y C A+N +G
Sbjct: 246 FLTSIHILNVDSADIGEYQCKASNDVG 272
>pdb|2RIK|A Chain A, I-Band Fragment I67-I69 From Titin
Length = 284
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVL 396
P F + +V+ G T +C G TW+K I G+YK+TL L
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR-PGGNYKMTLVENTATL 63
Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
++ + + DAG Y C A+N G
Sbjct: 64 TVLKVTKGDAGQYTCYASNVAG 85
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--- 392
+ PPRF EP+ ++ C G P W K E I S ++++
Sbjct: 95 VQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-SKFRMSFVES 153
Query: 393 DGVLQIVGLVRQDAGIYVCVAAN 415
VL++ L +D+G Y C A N
Sbjct: 154 VAVLEMYNLSVEDSGDYTCEAHN 176
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
+ PP F P VE +G V L C G P +W K + + S YK+ +
Sbjct: 188 KVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPFQVSWHKDKRELR-SGKKYKIMSEN 245
Query: 395 VL---QIVGLVRQDAGIYVCVAANGIG 418
L I+ + D G Y C A+N +G
Sbjct: 246 FLTSIHILNVDSADIGEYQCKASNDVG 272
>pdb|3OFW|A Chain A, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Carribean Sea Anemone
Stichodactyla Helianthus
Length = 60
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGG 101
IC +P +G C Y +Y+DS +C F YGGCGGN NNF T C+A C G
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAICRLG 60
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%)
Query: 494 ARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
A +C + G C +YFD T +C FIYGGC GN N F T QC +C
Sbjct: 2 AEASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
>pdb|3B43|A Chain A, I-band Fragment I65-i70 From Titin
Length = 570
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 340 PRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL---DGVL 396
P F + +V+ G T +C G TW+K I G+YK+TL L
Sbjct: 197 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIR-PGGNYKMTLVENTATL 255
Query: 397 QIVGLVRQDAGIYVCVAANGIG 418
++ + + DAG Y C A+N G
Sbjct: 256 TVLKVTKGDAGQYTCYASNVAG 277
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 336 IPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--- 392
+ PPRF EP+ ++ C G P W K E I S ++++
Sbjct: 287 VQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQES-SKFRMSFVES 345
Query: 393 DGVLQIVGLVRQDAGIYVCVAAN 415
VL++ L +D+G Y C A N
Sbjct: 346 VAVLEMYNLSVEDSGDYTCEAHN 368
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Query: 335 NIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG 394
+ PP F P VE +G V L C G P +W K + + S YK+ +
Sbjct: 380 KVKEPPVFRKKPHP-VETLKGADVHLECELQGTPPFQVSWHKDKRELR-SGKKYKIMSEN 437
Query: 395 VL---QIVGLVRQDAGIYVCVAANGIG 418
L I+ + D G Y C A+N +G
Sbjct: 438 FLTSIHILNVDSADIGEYQCKASNDVG 464
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 5/83 (6%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD---GV 395
PP F E VEA G +TL+C G P W K + + YK+
Sbjct: 5 PPYFIEPLE-HVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPA-YKMQFKNNVAS 62
Query: 396 LQIVGLVRQDAGIYVCVAANGIG 418
L I + D G Y C A N +G
Sbjct: 63 LVINKVDHSDVGEYTCKAENSVG 85
>pdb|2EDW|A Chain A, Solution Structure Of The I-Set Domain (3537-3630) Of
Human Obscurin
Length = 107
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG L+C + PV W KG ++ D Y L DG LQI GL D G
Sbjct: 19 EAREGATAVLQC-ELNSAAPV-EWRKGSETLRDGD-RYSLRQDGTKCELQIRGLAMADTG 75
Query: 408 IYVCV 412
Y CV
Sbjct: 76 EYSCV 80
>pdb|3K0W|A Chain A, Crystal Structure Of The Tandem Ig-Like C2-Type 2 Domains
Of The Human Mucosa-Associated Lymphoid Tissue Lymphoma
Translocation Protein 1
Length = 218
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 110 PDQLENRIAVASPPRFHNYSEPTVEA-EEGNFVTLRCIAIGYPIPVYTWSKGEV-----S 163
P+ + + S + EPT + G+ + L+C+A+G PIP Y W K E+ +
Sbjct: 104 PESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET 163
Query: 164 RKFFLRGFI 172
+K ++ ++
Sbjct: 164 KKLYMVPYV 172
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSI 381
G+ + L+C+A+G PIP Y W K E+ +
Sbjct: 133 GSTLVLQCVAVGSPIPHYQWFKNELPL 159
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAA 414
G FV L C A G+P Y W K I + T + + V + +DAG YVC
Sbjct: 33 GQFVKLCCRATGHPFVQYQWFKMNKEIPNGN-----TSELIFNAVHV--KDAGFYVCRVN 85
Query: 415 N 415
N
Sbjct: 86 N 86
>pdb|1QZ1|A Chain A, Crystal Structure Of The Ig 1-2-3 Fragment Of Ncam
Length = 291
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
Query: 348 PTVEAEE---------GNFVTLRCIAIGYPIPVYTWSKGEVSIDG---SDGHYKLTLDGV 395
PTV+A + G VTL C A G+P P +W+K I+ D + + D
Sbjct: 195 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 254
Query: 396 -LQIVGLVRQDAGIYVCVAANGIGD 419
L I + + D YVC+A N G+
Sbjct: 255 ELTIRNVDKNDEAEYVCIAENKAGE 279
>pdb|2WP3|T Chain T, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex
pdb|2WWK|T Chain T, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig F17r
Mutant Complex
pdb|2WWM|D Chain D, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
pdb|2WWM|T Chain T, Crystal Structure Of The Titin M10-Obscurin Like 1 Ig
Complex In Space Group P1
pdb|2Y9R|T Chain T, Crystal Structure Of The M10 Domain Of Titin
Length = 102
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG---HYKLTLD-G 394
PP+ + +EG +T+ C G P P TWS G I + H + T D
Sbjct: 7 PPKIEALPS-DISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLT 65
Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
L I+ + +QD G+Y N G
Sbjct: 66 TLIIMDVQKQDGGLYTLSLGNEFG 89
>pdb|3T62|D Chain D, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|E Chain E, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
pdb|3T62|F Chain F, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Chymotrypsin
Length = 54
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
IC +P +G C Y +Y+DS +C F YGGCGGN NNF T C+A C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
+C + G C +YFD T +C FIYGGC GN N F T QC +C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|1SHP|A Chain A, The Nmr Solution Structure Of A Kunitz-Type Proteinase
Inhibitor From The Sea Anemone Stichodactyla Helianthus
Length = 55
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
IC +P +G C Y +Y+DS +C F YGGCGGN NNF T C+A C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
+C + G C +YFD T +C FIYGGC GN N F T QC +C
Sbjct: 1 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|3KNB|A Chain A, Crystal Structure Of The Titin C-Terminus In Complex With
Obscurin- Like 1
pdb|3Q5O|A Chain A, Crystal Structure Of Human Titin Domain M10
pdb|3Q5O|B Chain B, Crystal Structure Of Human Titin Domain M10
Length = 100
Score = 34.7 bits (78), Expect = 0.15, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 339 PPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDG---HYKLTLD-G 394
PP+ + +EG +T+ C G P P TWS G I + H + T D
Sbjct: 5 PPKIEALPS-DISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLT 63
Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
L I+ + +QD G+Y N G
Sbjct: 64 TLIIMDVQKQDGGLYTLSLGNEFG 87
>pdb|3M7Q|B Chain B, Crystal Structure Of Recombinant Kunitz Type Serine
Protease Inhibitor-1 From The Caribbean Sea Anemone
Stichodactyla Helianthus In Complex With Bovine
Pancreatic Trypsin
Length = 61
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
IC +P +G C Y +Y+DS +C F YGGCGGN NNF T C+A C
Sbjct: 5 SICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%)
Query: 494 ARNDLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
A +C + G C +YFD T +C FIYGGC GN N F T QC +C
Sbjct: 2 AEASICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 57
>pdb|3NGG|A Chain A, X-Ray Structure Of Omwaprin
pdb|3NGG|B Chain B, X-Ray Structure Of Omwaprin
Length = 50
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%)
Query: 270 KEGECRPQPQNVCADNCKDDADCTGQAKCCPNDCGYSCSN 309
K G C P+PQ C CK+D C GQ KCC C C +
Sbjct: 6 KPGLCPPRPQKPCVKECKNDDSCPGQQKCCNYGCKDECRD 45
>pdb|3UOU|B Chain B, Crystal Structure Of The Kunitz-Type Protease Inhibitor
Shpi-1 Lys13leu Mutant In Complex With Pancreatic
Elastase
Length = 55
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 46 DICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNFMTEEACQARC 98
IC +P +G C Y +Y+DS +C F YGGCGGN NNF T C+A C
Sbjct: 1 SICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 497 DLCFLESESGPCTQQEAAWYFDRNTYRCQSFIYGGCEGNANRFNTEEQCERLC 549
+C + G C +YFD T +C FIYGGC GN N F T QC +C
Sbjct: 1 SICSEPKKVGRCLGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>pdb|3BFO|A Chain A, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|B Chain B, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|C Chain C, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
pdb|3BFO|D Chain D, Crystal Structure Of Ig-Like C2-Type 2 Domain Of The Human
Mucosa-Associated Lymphoid Tissue Lymphoma Translocation
Protein 1
Length = 91
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 347 EPTVEA-EEGNFVTLRCIAIGYPIPVYTWSKGEVSI 381
EPT + G+ + L+C+A+G PIP Y W K E+ +
Sbjct: 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL 44
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 130 EPTVEA-EEGNFVTLRCIAIGYPIPVYTWSKGEV 162
EPT + G+ + L+C+A+G PIP Y W K E+
Sbjct: 9 EPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNEL 42
>pdb|2WV3|A Chain A, Neuroplastin-55 Binds To And Signals Through The
Fibroblast Growth Factor Receptor
Length = 190
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGE----VSIDGSDGHYKLTLD---GVLQIVGL-VRQD 405
EG + C ++GYP P + W K E I S G + + L IV L + +D
Sbjct: 106 EGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITED 165
Query: 406 AGIYVCVAANGIG 418
G Y C A N IG
Sbjct: 166 PGEYECNATNSIG 178
>pdb|2GQH|A Chain A, Solution Structure Of The 15th Ig-Like Domain Of Human
Kiaa1556 Protein
Length = 107
Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG TL+C + PV W KG ++ D Y L DG LQI GL D G
Sbjct: 18 EAMEGATATLQC-ELSKAAPV-EWRKGLEALRDGD-KYSLRQDGAVCELQIHGLAMADNG 74
Query: 408 IYVCV 412
+Y CV
Sbjct: 75 VYSCV 79
>pdb|2DM3|A Chain A, Solution Structure Of The Second Ig Domain Of Human
Palladin
Length = 110
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 353 EEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD-GV--LQIVGLVRQDAGIY 409
+EG + C G P P +W + H L + GV L I + +DAGIY
Sbjct: 22 QEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIY 81
Query: 410 VCVAANGIG 418
C+A N G
Sbjct: 82 TCIATNRAG 90
>pdb|2VRA|A Chain A, Drosophila Robo Ig1-2 (Monoclinic Form)
pdb|2VRA|B Chain B, Drosophila Robo Ig1-2 (Monoclinic Form)
pdb|2VRA|C Chain C, Drosophila Robo Ig1-2 (Monoclinic Form)
pdb|2VRA|D Chain D, Drosophila Robo Ig1-2 (Monoclinic Form)
Length = 208
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 359 TLRCIAIGYPIPVYTWSK-GE-VSIDGSDGHYKLTLDGVL----QIVGLVRQDAGIYVCV 412
TL C G P P W K GE VS + H DG L + G QD G Y CV
Sbjct: 28 TLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87
Query: 413 AANGIGDPIRKEFNVIV 429
A N +G + + ++ +
Sbjct: 88 AKNRVGQAVSRHASLQI 104
>pdb|2VR9|A Chain A, Drosophila Robo Ig1-2 (Tetragonal Form)
pdb|2VR9|B Chain B, Drosophila Robo Ig1-2 (Tetragonal Form)
pdb|2VR9|C Chain C, Drosophila Robo Ig1-2 (Tetragonal Form)
Length = 217
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 359 TLRCIAIGYPIPVYTWSK-GE-VSIDGSDGHYKLTLDGVL----QIVGLVRQDAGIYVCV 412
TL C G P P W K GE VS + H DG L + G QD G Y CV
Sbjct: 28 TLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCV 87
Query: 413 AANGIGDPIRKEFNVIV 429
A N +G + + ++ +
Sbjct: 88 AKNRVGQAVSRHASLQI 104
>pdb|3V2A|R Chain R, Vegfr-2VEGF-A Complex Structure
Length = 772
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 342 FHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGL 401
F + E VEA G V + +GYP P W K + + + ++ + VL I+ +
Sbjct: 332 FGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPL---ESNHTIKAGHVLTIMEV 388
Query: 402 VRQDAGIYVCVAANGIGDPIRKE 424
+D G Y + N PI KE
Sbjct: 389 SERDTGNYTVILTN----PISKE 407
>pdb|2EDQ|A Chain A, Solution Structure Of The Ig-Like Domain (3713-3806) Of
Human Obscurin
Length = 107
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG+ TL C + PV W KG ++ D H L DG LQI GL DAG
Sbjct: 19 EATEGDTATLWC-ELSKAAPV-EWRKGHETLRDGDRH-SLRQDGSRCELQIRGLAVVDAG 75
Query: 408 IYVCV 412
Y CV
Sbjct: 76 EYSCV 80
>pdb|2JLL|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3ii
Length = 389
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSK---------GEVSIDGSDGHYKLTLDGVLQIVGLVRQ 404
E VTL C A G PIP TW + G+ S+DG L I +
Sbjct: 14 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS 73
Query: 405 DAGIYVCVAANGIG 418
D+G Y C AA+ IG
Sbjct: 74 DSGRYDCEAASRIG 87
>pdb|1U2H|A Chain A, X-Ray Structure Of The N-Terminally Truncated Human Apep-1
Length = 99
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 338 SPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG--- 394
+PP F S EG V + G P PV +W + + + +G
Sbjct: 4 APPTF-KVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLC 62
Query: 395 VLQIVGLVRQDAGIYVCVAANGIG 418
L+I+ R DAG Y C A N G
Sbjct: 63 RLRILAAERGDAGFYTCKAVNEYG 86
>pdb|3V6B|R Chain R, Vegfr-2VEGF-E Complex Structure
Length = 424
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 347 EPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGVLQIVGLVRQDA 406
E VEA G V + +GYP P W K + ++ + + + VL I+ + +D
Sbjct: 207 ESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN---HTIKAGHVLTIMEVSERDT 263
Query: 407 GIYVCVAANGIGDPIRKE 424
G Y + N PI KE
Sbjct: 264 GNYTVILTN----PISKE 277
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 332 YTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT 391
Y P I PP + EG L+C A + +W ++ + G YK+
Sbjct: 340 YAPVIVEPP-------ADLNVTEGMAAELKCRA-STSLTSVSWITPNGTV-MTHGAYKVR 390
Query: 392 L----DGVLQIVGLVRQDAGIYVCVAANGIGD 419
+ DG L + QD G+Y C+ +N +G+
Sbjct: 391 IAVLSDGTLNFTNVTVQDTGMYTCMVSNSVGN 422
>pdb|2XYC|A Chain A, Crystal Structure Of Ncam2 Igiv-Fn3i
Length = 291
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSK---------GEVSIDGSDGHYKLTLDGVLQIVGLVRQ 404
E VTL C A G PIP TW + G+ S+DG L I +
Sbjct: 14 ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS 73
Query: 405 DAGIYVCVAANGIG 418
D+G Y C AA+ IG
Sbjct: 74 DSGRYDCEAASRIG 87
>pdb|2GSI|B Chain B, Crystal Structure Of A Murine Fab In Complex With An 11
Residue Peptide Derived From Staphylococcal Nuclease
pdb|2GSI|D Chain D, Crystal Structure Of A Murine Fab In Complex With An 11
Residue Peptide Derived From Staphylococcal Nuclease
pdb|2GSI|F Chain F, Crystal Structure Of A Murine Fab In Complex With An 11
Residue Peptide Derived From Staphylococcal Nuclease
pdb|2GSI|H Chain H, Crystal Structure Of A Murine Fab In Complex With An 11
Residue Peptide Derived From Staphylococcal Nuclease
Length = 221
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 67 DSLEARCRQFYYGGCGGNQNNFMTEEACQARCAGGTFVTSSAAPDQLENRIAVASPPRFH 126
SL + YY C M +A G T TSSA +PP +
Sbjct: 83 SSLTSEDTAVYY--CNAGVITMMGYQAMDYWGQGTTVTTSSAK----------TTPPSVY 130
Query: 127 NYSEPTVEAEEGNFVTLRCIAIGY-PIPV-YTWSKGEVSRKFFLRGFISANDLCFL 180
+ P A+ + VTL C+ GY P PV TW+ G +S + +DL L
Sbjct: 131 PLA-PGTAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 185
>pdb|3AUD|A Chain A, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
pdb|3AUD|B Chain B, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
pdb|3AUD|C Chain C, Simplified Bpti Variant With Poly Asn Amino Acid Tag
(C5n) At The C- Terminus
Length = 65
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
>pdb|3AUC|A Chain A, A Simplified Bpti Variant With Poly Ser (C5s) Amino Acid
Tag At The C- Terminus
pdb|3AUC|B Chain B, A Simplified Bpti Variant With Poly Ser (C5s) Amino Acid
Tag At The C- Terminus
Length = 65
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQTFVYGGVRAKRNNF 45
>pdb|3O4O|C Chain C, Crystal Structure Of An Interleukin-1 Receptor Complex
Length = 339
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 354 EGNFVTLRCIAIGY-------PIPVYTWSKGEV--SIDGSDGHYKLTLDGVLQIVGLVRQ 404
EG V LRC + Y P TW K + ++ G + DG L ++ +++
Sbjct: 32 EGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQE 91
Query: 405 DAGIYVCVAANG 416
D+G YVC N
Sbjct: 92 DSGTYVCTTRNA 103
>pdb|1RY7|B Chain B, Crystal Structure Of The 3 Ig Form Of Fgfr3c In Complex
With Fgf1
Length = 334
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 356 NFVTLRCIAIGYPIPVYTWSK------GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIY 409
N V RC A G P P +W K GE I G ++ L + +V D G Y
Sbjct: 139 NTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ---QWSLVMESVVPSDRGNY 195
Query: 410 VCVAANGIGDPIRKEFNVIV 429
CV N G IR+ + + V
Sbjct: 196 TCVVENKFGS-IRQTYTLDV 214
>pdb|3OJ2|C Chain C, Crystal Structure Of Fgf1 Complexed With The Ectodomain Of
Fgfr2b Harboring The A172f Pfeiffer Syndrome Mutation
pdb|3OJ2|D Chain D, Crystal Structure Of Fgf1 Complexed With The Ectodomain Of
Fgfr2b Harboring The A172f Pfeiffer Syndrome Mutation
Length = 231
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 35 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 94
Query: 413 AANGIG 418
N G
Sbjct: 95 VENEYG 100
>pdb|2EDT|A Chain A, Solution Structure Of The Ig-Like Domain (3449-3537) From
Human Obscurin
Length = 102
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 351 EAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDGV---LQIVGLVRQDAG 407
EA EG L C + PV W KG ++ D Y L +G LQI GL DAG
Sbjct: 19 EAVEGATAMLWC-ELSKVAPV-EWRKGPENLRDGD-RYILRQEGTRCELQICGLAMADAG 75
Query: 408 IYVCV 412
Y+CV
Sbjct: 76 EYLCV 80
>pdb|3PUC|A Chain A, Atomic Resolution Structure Of Titin Domain M7
Length = 99
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 364 AIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG---VLQIVGLVRQDAGIYVCVAANGIG 418
A G P P W+K +I G YKL+ D L+I D+G+Y C N G
Sbjct: 30 ATGEPRPTAIWTKDGKAIT-QGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAG 86
>pdb|3GRW|A Chain A, Fgfr3 In Complex With A Fab
Length = 241
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 10/80 (12%)
Query: 356 NFVTLRCIAIGYPIPVYTWSK------GEVSIDGSDGHYKLTLDGVLQIVGLVRQDAGIY 409
N V RC A G P P +W K GE I G ++ L + +V D G Y
Sbjct: 31 NTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQ---QWSLVMESVVPSDRGNY 87
Query: 410 VCVAANGIGDPIRKEFNVIV 429
CV N G IR+ + + V
Sbjct: 88 TCVVENKFGS-IRQTYTLDV 106
>pdb|3OJM|B Chain B, Crystal Structure Of Fgf1 Complexed With The Ectodomain Of
Fgfr2b Harboring P253r Apert Mutation
Length = 231
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVC 411
N V RC A G P+P W K E + G YK+ L + +V D G Y C
Sbjct: 34 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 93
Query: 412 VAANGIG 418
V N G
Sbjct: 94 VVENEYG 100
>pdb|3CAF|A Chain A, Crystal Structure Of Hfgfr2 D2 Domain
pdb|3CU1|A Chain A, Crystal Structure Of 2:2:2 Fgfr2d2:fgf1:sos Complex
pdb|3CU1|C Chain C, Crystal Structure Of 2:2:2 Fgfr2d2:fgf1:sos Complex
pdb|3EUU|A Chain A, Crystal Structure Of The Fgfr2 D2 Domain
pdb|3EUU|B Chain B, Crystal Structure Of The Fgfr2 D2 Domain
Length = 100
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKG------EVSIDG---SDGHYKLTLDGVLQIVGLVRQD 405
N V RC A G P+P W K E I G + H+ L ++ V V D
Sbjct: 23 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESV------VPSD 76
Query: 406 AGIYVCVAANGIG 418
G Y CV N G
Sbjct: 77 KGNYTCVVENEYG 89
>pdb|1WVZ|A Chain A, Solution Structure Of The D2 Domain Of The Fibroblast
Growth Factor
Length = 104
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKG------EVSIDG---SDGHYKLTLDGVLQIVGLVRQD 405
N V RC A G P+P W K E I G + H+ L ++ V V D
Sbjct: 27 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESV------VPSD 80
Query: 406 AGIYVCVAANGIG 418
G Y CV N G
Sbjct: 81 KGNYTCVVENEYG 93
>pdb|3QQN|A Chain A, The Retinal Specific Cd147 Ig0 Domain: From Molecular
Structure To Biological Activity
pdb|3QQN|B Chain B, The Retinal Specific Cd147 Ig0 Domain: From Molecular
Structure To Biological Activity
Length = 137
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 21/97 (21%)
Query: 355 GNFVTLRCIAIGYPIPVYTW---SKGEVSI-----DGS-------DGHYKLTLDGVLQIV 399
G V L C A+G P+P W +G I DG+ Y + I
Sbjct: 36 GGSVELHCEAVGSPVPEIQWWFEGQGPNDIXSQLWDGARLDRVHIHATYHQHAASTISID 95
Query: 400 GLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQW 436
LV +D G Y C A+N DP R N + R +W
Sbjct: 96 TLVEEDTGTYECRASN---DPDR---NHLTRAPRVKW 126
>pdb|2NTY|A Chain A, Rop4-Gdp-Prone8
pdb|2NTY|B Chain B, Rop4-Gdp-Prone8
pdb|2WBL|A Chain A, Three-Dimensional Structure Of A Binary Rop-Prone Complex
pdb|2WBL|B Chain B, Three-Dimensional Structure Of A Binary Rop-Prone Complex
Length = 365
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQWYYDRDTDSCQPFQYGG 452
DGV + + RQ + + + A D + + RG+ E WY RD++ G
Sbjct: 95 DGVCTEIMVTRQRGDLLMNIPALRKLDAMLIDTLDNFRGHNEFWYVSRDSEE-------G 147
Query: 453 CQGNHNRFNDQW 464
Q ++R ND+W
Sbjct: 148 QQARNDRTNDKW 159
>pdb|3DAR|A Chain A, Crystal Structure Of D2 Domain From Human Fgfr2
pdb|3DAR|B Chain B, Crystal Structure Of D2 Domain From Human Fgfr2
Length = 105
Score = 30.4 bits (67), Expect = 2.6, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 355 GNFVTLRCIAIGYPIPVYTWSKG------EVSIDG---SDGHYKLTLDGVLQIVGLVRQD 405
N V RC A G P+P W K E I G + H+ L ++ V V D
Sbjct: 28 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESV------VPSD 81
Query: 406 AGIYVCVAANGIG 418
G Y CV N G
Sbjct: 82 KGNYTCVVENEYG 94
>pdb|2W65|A Chain A, Anti Citrullinated Collagen Type 2 Antibody Acc4 In
Complex With A Citrullinated Peptide
pdb|2W65|C Chain C, Anti Citrullinated Collagen Type 2 Antibody Acc4 In
Complex With A Citrullinated Peptide
Length = 218
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 86 NNFMTEEACQARCAGGTFVTSSAAPDQ---LENRIAVASPPRFHNYSEPTVEAEEGNFVT 142
NN E+ CA T T A Q + A +PP + + P A+ + VT
Sbjct: 84 NNLKNEDTATYFCARATTATELAYWGQGTLVTVSAAKTTPPSVYPLA-PGSAAQRNSMVT 142
Query: 143 LRCIAIGY-PIPV-YTWSKGEVSRKFFLRGFISANDLCFL 180
L C+ GY P PV TW+ G +S + +DL L
Sbjct: 143 LGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTL 182
>pdb|3QR2|A Chain A, Wild Type Cd147 Ig0 Domain
pdb|3QR2|B Chain B, Wild Type Cd147 Ig0 Domain
Length = 137
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 21/97 (21%)
Query: 355 GNFVTLRCIAIGYPIPVYTW---SKGEVSI-----DGS-------DGHYKLTLDGVLQIV 399
G V L C A+G P+P W +G I DG+ Y + I
Sbjct: 36 GGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISID 95
Query: 400 GLVRQDAGIYVCVAANGIGDPIRKEFNVIVRGNYEQW 436
LV +D G Y C A+N DP R N + R +W
Sbjct: 96 TLVEEDTGTYECRASN---DPDR---NHLTRAPRVKW 126
>pdb|2A38|A Chain A, Crystal Structure Of The N-Terminus Of Titin
pdb|2A38|B Chain B, Crystal Structure Of The N-Terminus Of Titin
pdb|2A38|C Chain C, Crystal Structure Of The N-Terminus Of Titin
Length = 194
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 18/86 (20%)
Query: 345 YSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GE---------VSIDGSDGHYKLTL 392
+++P +V EG+ T G+P+P +W + G+ V I SDG KLT+
Sbjct: 8 FTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTI 67
Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIG 418
V + ++G Y A NG G
Sbjct: 68 PAV------TKANSGRYSLKATNGSG 87
>pdb|1YA5|A Chain A, Crystal Structure Of The Titin Domains Z1z2 In Complex
With Telethonin
pdb|1YA5|B Chain B, Crystal Structure Of The Titin Domains Z1z2 In Complex
With Telethonin
pdb|2F8V|A Chain A, Structure Of Full Length Telethonin In Complex With The
N-Terminus Of Titin
pdb|2F8V|B Chain B, Structure Of Full Length Telethonin In Complex With The
N-Terminus Of Titin
pdb|2F8V|C Chain C, Structure Of Full Length Telethonin In Complex With The
N-Terminus Of Titin
pdb|2F8V|D Chain D, Structure Of Full Length Telethonin In Complex With The
N-Terminus Of Titin
Length = 201
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 18/86 (20%)
Query: 345 YSEP--TVEAEEGNFVTLRCIAIGYPIPVYTWSK-GE---------VSIDGSDGHYKLTL 392
+++P +V EG+ T G+P+P +W + G+ V I SDG KLT+
Sbjct: 8 FTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTI 67
Query: 393 DGVLQIVGLVRQDAGIYVCVAANGIG 418
V + ++G Y A NG G
Sbjct: 68 PAV------TKANSGRYSLKATNGSG 87
>pdb|1EV2|E Chain E, Crystal Structure Of Fgf2 In Complex With The
Extracellular Ligand Binding Domain Of Fgf Receptor 2
(Fgfr2)
pdb|1EV2|F Chain F, Crystal Structure Of Fgf2 In Complex With The
Extracellular Ligand Binding Domain Of Fgf Receptor 2
(Fgfr2)
pdb|1EV2|G Chain G, Crystal Structure Of Fgf2 In Complex With The
Extracellular Ligand Binding Domain Of Fgf Receptor 2
(Fgfr2)
pdb|1EV2|H Chain H, Crystal Structure Of Fgf2 In Complex With The
Extracellular Ligand Binding Domain Of Fgf Receptor 2
(Fgfr2)
Length = 220
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 27 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 86
Query: 413 AANGIG 418
N G
Sbjct: 87 VENEYG 92
>pdb|2FDB|P Chain P, Crystal Structure Of Fibroblast Growth Factor (Fgf)8b In
Complex With Fgf Receptor (Fgfr) 2c
pdb|2FDB|R Chain R, Crystal Structure Of Fibroblast Growth Factor (Fgf)8b In
Complex With Fgf Receptor (Fgfr) 2c
Length = 220
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 25 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 84
Query: 413 AANGIG 418
N G
Sbjct: 85 VENEYG 90
>pdb|1II4|E Chain E, Crystal Structure Of Ser252trp Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1II4|F Chain F, Crystal Structure Of Ser252trp Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1II4|G Chain G, Crystal Structure Of Ser252trp Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1II4|H Chain H, Crystal Structure Of Ser252trp Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
Length = 220
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 27 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 86
Query: 413 AANGIG 418
N G
Sbjct: 87 VENEYG 92
>pdb|1IIL|E Chain E, Crystal Structure Of Pro253arg Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1IIL|F Chain F, Crystal Structure Of Pro253arg Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1IIL|G Chain G, Crystal Structure Of Pro253arg Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
pdb|1IIL|H Chain H, Crystal Structure Of Pro253arg Apert Mutant Fgf Receptor 2
(Fgfr2) In Complex With Fgf2
Length = 220
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 27 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 86
Query: 413 AANGIG 418
N G
Sbjct: 87 VENEYG 92
>pdb|1E0O|B Chain B, Crystal Structure Of A Ternary Fgf1-Fgfr2-Heparin Complex
pdb|1E0O|D Chain D, Crystal Structure Of A Ternary Fgf1-Fgfr2-Heparin Complex
Length = 219
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 356 NFVTLRCIAIGYPIPVYTWSKG--EVSIDGSDGHYKL-TLDGVLQIVGLVRQDAGIYVCV 412
N V RC A G P+P W K E + G YK+ L + +V D G Y CV
Sbjct: 26 NTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 85
Query: 413 AANGIG 418
N G
Sbjct: 86 VENEYG 91
>pdb|3EJJ|X Chain X, Structure Of M-Csf Bound To The First Three Domains Of Fms
Length = 289
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 382 DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
D D +YK L V QDAGIY CVA+N +G
Sbjct: 235 DFQDNYYKKVRALSLNAVDF--QDAGIYSCVASNDVG 269
>pdb|2LQR|A Chain A, Nmr Structure Of Ig3 Domain Of Palladin
Length = 108
Score = 29.6 bits (65), Expect = 4.9, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LDGV--LQIVGLVRQDAGIY 409
EG VT C G P P W K I HY + LDG L D G Y
Sbjct: 21 EGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNY 80
Query: 410 VCVAANGIG 418
+AAN G
Sbjct: 81 TIMAANPQG 89
>pdb|4EXP|X Chain X, Structure Of Mouse Interleukin-34 In Complex With Mouse
Fms
Length = 283
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 382 DGSDGHYKLTLDGVLQIVGLVRQDAGIYVCVAANGIG 418
D D +YK L V QDAGIY CVA+N +G
Sbjct: 235 DFQDNYYKKVRALSLNAVDF--QDAGIYSCVASNDVG 269
>pdb|2DM2|A Chain A, Solution Structure Of The First Ig Domain Of Human
Palladin
Length = 110
Score = 29.6 bits (65), Expect = 5.1, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT--LDGV--LQIVGLVRQDAGIY 409
EG VT C G P P W K I HY + LDG L D G Y
Sbjct: 22 EGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNY 81
Query: 410 VCVAANGIG 418
+AAN G
Sbjct: 82 TIMAANPQG 90
>pdb|2Y25|A Chain A, Crystal Structure Of The Myomesin Domains My11-My13
pdb|2Y25|B Chain B, Crystal Structure Of The Myomesin Domains My11-My13
pdb|2Y25|C Chain C, Crystal Structure Of The Myomesin Domains My11-My13
pdb|2Y25|D Chain D, Crystal Structure Of The Myomesin Domains My11-My13
Length = 317
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 349 TVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLD----GVLQIVGLVRQ 404
V +EG + L C G P P +W K E ++ SD H L + I G+
Sbjct: 231 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKAL-ASDDHCNLKFEAGRTAYFTINGVSTA 289
Query: 405 DAGIYVCVAANGIG 418
D+G Y V N G
Sbjct: 290 DSGKYGLVVKNKYG 303
>pdb|2NTX|A Chain A, Prone8
pdb|2NTX|B Chain B, Prone8
Length = 365
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 7/35 (20%)
Query: 430 RGNYEQWYYDRDTDSCQPFQYGGCQGNHNRFNDQW 464
RG+ E WY RD++ G Q ++R ND+W
Sbjct: 132 RGHNEFWYVSRDSEE-------GQQARNDRTNDKW 159
>pdb|3AUI|A Chain A, A Simplified Bpti Variant With Poly Glu Amino Acid Tag
(C3e) At The C- Terminus
pdb|3AUI|B Chain B, A Simplified Bpti Variant With Poly Glu Amino Acid Tag
(C3e) At The C- Terminus
Length = 63
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3CI7|A Chain A, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|B Chain B, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|C Chain C, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
pdb|3CI7|D Chain D, Crystal Structure Of A Simplified Bpti Containing 20
Alanines
Length = 58
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGARAKRNNF 45
>pdb|2YR3|A Chain A, Solution Structure Of The Fourth Ig-Like Domain From
Myosin Light Chain Kinase, Smooth Muscle
Length = 99
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 354 EGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTL--DGV--LQIVGLVRQDAGIY 409
EG L+C G P+P TW ++G Y + GV L I + +D G Y
Sbjct: 25 EGQDFVLQCSVRGTPVPRITW-----LLNGQPIQYARSTCEAGVAELHIQDALPEDHGTY 79
Query: 410 VCVAANGIG 418
C+A N +G
Sbjct: 80 TCLAENALG 88
>pdb|1FHG|A Chain A, High Resolution Refinement Of Telokin
Length = 154
Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)
Query: 350 VEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLTLDG----VLQIVGLVRQD 405
+E EG+ C GYP P W K + + S H+++ D L I + D
Sbjct: 51 MEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESR-HFQIDYDEEGNCSLTISEVCGDD 109
Query: 406 AGIYVCVAANGIGD 419
Y C A N +G+
Sbjct: 110 DAKYTCKAVNSLGE 123
>pdb|3AUG|A Chain A, A Simplified Bpti Variant With Poly Pro Amino Acid Tag
(C5p) At The C- Terminus
pdb|3AUG|C Chain C, A Simplified Bpti Variant With Poly Pro Amino Acid Tag
(C5p) At The C- Terminus
Length = 65
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3AUE|A Chain A, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|B Chain B, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|C Chain C, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|D Chain D, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|E Chain E, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|F Chain F, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|G Chain G, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
pdb|3AUE|H Chain H, A Simplified Bpti Variant With Poly His Amino Acid Tag
(C5h) At The C- Terminus
Length = 65
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3AUB|A Chain A, A Simplified Bpti Variant Stabilized By The A14g And
A38v Substitutions
pdb|3AUB|B Chain B, A Simplified Bpti Variant Stabilized By The A14g And
A38v Substitutions
Length = 58
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 47 ICLQPAVIGDCANYVLTWYYDSLEARCRQFYYGGCGGNQNNF 88
CL+P G ++ ++Y++ + F YGG +NNF
Sbjct: 4 FCLEPPYAGPGKARIIRYFYNAAAGAAQAFVYGGVRAKRNNF 45
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 13/92 (14%)
Query: 332 YTPNIPSPPRFHNYSEPTVEAEEGNFVTLRCIAIGYPIPVYTWSKGEVSIDGSDGHYKLT 391
Y P I PP N +E G L+C G + W ++ + G Y++
Sbjct: 311 YAPVIVEPPTDLNVTE-------GMAAELKC-RTGTSMTSVNWLTPNGTL-MTHGSYRVR 361
Query: 392 L----DGVLQIVGLVRQDAGIYVCVAANGIGD 419
+ DG L + QD G Y C+ N G+
Sbjct: 362 ISVLHDGTLNFTNVTVQDTGQYTCMVTNSAGN 393
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,275,506
Number of Sequences: 62578
Number of extensions: 908873
Number of successful extensions: 2533
Number of sequences better than 100.0: 216
Number of HSP's better than 100.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 1920
Number of HSP's gapped (non-prelim): 674
length of query: 615
length of database: 14,973,337
effective HSP length: 105
effective length of query: 510
effective length of database: 8,402,647
effective search space: 4285349970
effective search space used: 4285349970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)