Your job contains 1 sequence.
>psy10165
MSQIVQGWIWNLGKINIQWPGLSAPVIRGRELVQQTRLPPDPDREAKLIALRDKQFQGKY
RKTPPLERGWSGGKLGGRSLGPPDPVGENTAKEIWAGVTGVSNAGKKRGRGRGPGKLTAR
DLNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSV
EGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQE
ICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQQKSHQQLAEEQQLHLVEFSEENDNYPT
IVASPSTCKKDSSKAPDFTEVSSWSYRPEIEERRKTG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10165
(337 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0044510 - symbol:mRpS5 "mitochondrial ribosomal pr... 467 5.4e-65 2
UNIPROTKB|F1SU66 - symbol:MRPS5 "Uncharacterized protein"... 424 2.6e-51 2
UNIPROTKB|Q2KID9 - symbol:MRPS5 "28S ribosomal protein S5... 414 1.1e-50 2
UNIPROTKB|E2RB92 - symbol:MRPS5 "Uncharacterized protein"... 402 1.4e-48 2
UNIPROTKB|P82675 - symbol:MRPS5 "28S ribosomal protein S5... 396 2.9e-48 2
UNIPROTKB|F1NYZ1 - symbol:MRPS5 "Uncharacterized protein"... 398 4.2e-47 2
MGI|MGI:1924971 - symbol:Mrps5 "mitochondrial ribosomal p... 386 8.6e-47 2
RGD|1308318 - symbol:Mrps5 "mitochondrial ribosomal prote... 389 1.1e-46 2
ZFIN|ZDB-GENE-060929-264 - symbol:mrps5 "mitochondrial ri... 391 1.4e-46 2
WB|WBGene00008452 - symbol:mrps-5 species:6239 "Caenorhab... 336 7.3e-38 2
TAIR|locus:2010896 - symbol:AT1G64880 species:3702 "Arabi... 233 9.0e-19 1
CGD|CAL0003817 - symbol:orf19.989 species:5476 "Candida a... 213 6.7e-16 1
TIGR_CMR|GSU_2840 - symbol:GSU_2840 "ribosomal protein S5... 191 6.9e-15 1
POMBASE|SPAC4G9.17c - symbol:mrps5 "mitochondrial ribosom... 206 1.2e-14 1
TIGR_CMR|SPO_0502 - symbol:SPO_0502 "ribosomal protein S5... 186 2.6e-14 1
TIGR_CMR|CBU_0255 - symbol:CBU_0255 "ribosomal protein S5... 180 1.3e-13 1
TIGR_CMR|CJE_1858 - symbol:CJE_1858 "ribosomal protein S5... 167 3.8e-12 1
TIGR_CMR|ECH_0426 - symbol:ECH_0426 "ribosomal protein S5... 166 4.9e-12 1
TIGR_CMR|CPS_0618 - symbol:CPS_0618 "ribosomal protein S5... 165 6.5e-12 1
UNIPROTKB|Q9KP01 - symbol:rpsE "30S ribosomal protein S5"... 163 1.1e-11 1
TIGR_CMR|VC_2579 - symbol:VC_2579 "ribosomal protein S5" ... 163 1.1e-11 1
UNIPROTKB|P0A7W1 - symbol:rpsE "30S ribosomal subunit pro... 161 1.8e-11 1
TIGR_CMR|APH_0297 - symbol:APH_0297 "ribosomal protein S5... 157 5.1e-11 1
TIGR_CMR|BA_0127 - symbol:BA_0127 "ribosomal protein S5" ... 154 1.1e-10 1
TIGR_CMR|SO_0248 - symbol:SO_0248 "ribosomal protein S5" ... 153 1.4e-10 1
TIGR_CMR|NSE_0283 - symbol:NSE_0283 "ribosomal protein S5... 149 4.0e-10 1
ASPGD|ASPL0000056760 - symbol:AN0142 species:162425 "Emer... 114 1.4e-09 2
TIGR_CMR|CHY_2292 - symbol:CHY_2292 "ribosomal protein S5... 140 4.0e-09 1
TIGR_CMR|DET_0491 - symbol:DET_0491 "ribosomal protein S5... 139 5.1e-09 1
SGD|S000000455 - symbol:MRPS5 "Mitochondrial ribosomal pr... 139 6.0e-07 1
TAIR|locus:2057645 - symbol:EMB3113 "EMBRYO DEFECTIVE 311... 127 1.4e-05 1
UNIPROTKB|P66574 - symbol:rpsE "30S ribosomal protein S5"... 110 0.00056 1
SGD|S000003091 - symbol:RPS2 "Protein component of the sm... 111 0.00064 1
TAIR|locus:2016585 - symbol:XW6 species:3702 "Arabidopsis... 111 0.00082 1
TAIR|locus:504956181 - symbol:AT1G58684 species:3702 "Ara... 111 0.00082 1
TAIR|locus:2826988 - symbol:AT1G58983 species:3702 "Arabi... 111 0.00082 1
TAIR|locus:2826968 - symbol:AT1G59359 species:3702 "Arabi... 111 0.00082 1
>FB|FBgn0044510 [details] [associations]
symbol:mRpS5 "mitochondrial ribosomal protein S5"
species:7227 "Drosophila melanogaster" [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
EMBL:AE014296 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 HSSP:P02357 CTD:64969
GeneTree:ENSGT00390000001878 OMA:RQETHQQ UniGene:Dm.1580
GeneID:3355089 KEGG:dme:Dmel_CG40049 FlyBase:FBgn0044510
GenomeRNAi:3355089 NextBio:850514 EMBL:AY071397
RefSeq:NP_001036652.1 RefSeq:NP_001036653.1 SMR:Q8SYP9
MINT:MINT-878035 STRING:Q8SYP9 EnsemblMetazoa:FBtr0111146
EnsemblMetazoa:FBtr0111147 UCSC:CG40049-RA InParanoid:Q8SYP9
Uniprot:Q8SYP9
Length = 407
Score = 467 (169.5 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 93/189 (49%), Positives = 119/189 (62%)
Query: 117 LTARDLNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFAL 176
+ R + +G + F FDTR+LE K VF MK N GR R S L VTGNG GLAGFA
Sbjct: 152 MPGRSIGPPDPVGDEEFVSFDTRVLENKIVFIMKGNMGRKRRYSVLSVTGNGNGLAGFAT 211
Query: 177 GKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHR 236
K+ E R ++R +KNRAGQKLI + ++ T+ HDF T FGKTKIF +KP+G GL+CHR
Sbjct: 212 AKAPEVRTALRKSKNRAGQKLINISLCENRTIFHDFRTDFGKTKIFCFQKPDGYGLVCHR 271
Query: 237 IIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEEND 296
IQ ICK +GIKD+ AK+EGSTN Q I KAFF+GLM Q+S V+ + +
Sbjct: 272 AIQTICKVIGIKDLYAKIEGSTNIQNIAKAFFIGLMTQRSYQYIANETNSNIVQLQKTRN 331
Query: 297 NYPTIVASP 305
+ + P
Sbjct: 332 RFIDVKGMP 340
Score = 213 (80.0 bits), Expect = 5.4e-65, Sum P(2) = 5.4e-65
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 13 GKINIQWPGLSAPVIRGRELVQQTRLPPDPDREAKLIALRDKQFQGKYRKTPPLERGWSG 72
GK WPGL++P+IRG EL+ Q +L + DRE ++ LRD K K P++RGWSG
Sbjct: 90 GKCGRIWPGLNSPLIRGNELINQQKLNENLDRENGILKLRDSMGSFKLMKLNPIDRGWSG 149
Query: 73 GKLGGRSLGPPDPVGE 88
K+ GRS+GPPDPVG+
Sbjct: 150 SKMPGRSIGPPDPVGD 165
Score = 84 (34.6 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 91 AKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
A++IW GVT VSNA A+DLN+GQ IG
Sbjct: 50 AEDIWRGVTAVSNAGKKRGRGKGSGKKVAKDLNKGQSIG 88
Score = 40 (19.1 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 68 RGWSGGKLGGRSLGPPDPVGENTAKEIWAGV 98
RG GK + L +G IW G+
Sbjct: 69 RGKGSGKKVAKDLNKGQSIGFGKCGRIWPGL 99
>UNIPROTKB|F1SU66 [details] [associations]
symbol:MRPS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005739 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 GeneTree:ENSGT00390000001878 OMA:RQETHQQ
EMBL:CU582785 RefSeq:XP_003124867.3 Ensembl:ENSSSCT00000008889
GeneID:100521262 KEGG:ssc:100521262 Uniprot:F1SU66
Length = 430
Score = 424 (154.3 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 88/193 (45%), Positives = 116/193 (60%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T+D FDTRILE + VF M GR R+V LV GNG+G AGFA+GK+ E + R AK
Sbjct: 213 ETYDDFDTRILEVRNVFNMTAKEGRKRSVRVLVAVGNGKGAAGFAIGKATERADAFRKAK 272
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+DHT+ HD +F +T I ++K+P G GL CHR I IC+ +GIKD+
Sbjct: 273 NRAVHYLHYIERYEDHTIYHDISLKFKRTHIKMKKQPRGYGLHCHRAIMTICRLIGIKDL 332
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASPS-TCK 309
AKV GS N + + FLGL +Q++ VEF EE P +VASP +
Sbjct: 333 YAKVSGSVNMLNLTRGLFLGLSRQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALR 392
Query: 310 KD---SSKAPDFT 319
KD + PD T
Sbjct: 393 KDPEPEDEVPDIT 405
Score = 126 (49.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIR-GRELVQQTRLPPDPDR-EAKLIALRDKQFQGKYRKT 63
+G I G+ WPGL+ P++R G R D ++ EA ++ R++ + + K
Sbjct: 128 RGQIIGEGRHGFLWPGLNIPLMRNGAVQTIAQRSKEDQEKVEADMVQQREEWDRRRKMKV 187
Query: 64 PPLERGWSGGKLGGRSLGPPDPVGEN 89
ERGWSG GG SLGPPDP G N
Sbjct: 188 KR-ERGWSGNTWGGVSLGPPDP-GPN 211
Score = 70 (29.7 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 16/40 (40%), Positives = 18/40 (45%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA E+W G S A +DLNRGQIIG
Sbjct: 94 TADELWKGALAESGAGARKGRGKRTKKKRRKDLNRGQIIG 133
>UNIPROTKB|Q2KID9 [details] [associations]
symbol:MRPS5 "28S ribosomal protein S5, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 EMBL:BC112674
IPI:IPI00709048 RefSeq:NP_001039588.1 UniGene:Bt.4900
ProteinModelPortal:Q2KID9 PRIDE:Q2KID9 Ensembl:ENSBTAT00000010843
GeneID:512469 KEGG:bta:512469 CTD:64969
GeneTree:ENSGT00390000001878 HOGENOM:HOG000231482
HOVERGEN:HBG030178 InParanoid:Q2KID9 OMA:RQETHQQ OrthoDB:EOG4P2Q29
NextBio:20870404 Uniprot:Q2KID9
Length = 430
Score = 414 (150.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 85/196 (43%), Positives = 115/196 (58%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T+D FDTRILE + VF M GR R+V LV GNG+G AGFA+GK+ E + R AK
Sbjct: 213 ETYDDFDTRILEVRNVFNMTAKEGRKRSVRVLVAVGNGRGAAGFAIGKATERADAFRKAK 272
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+DHT+ HD F +T I ++K+P G GL CHR I IC+ +GIKD+
Sbjct: 273 NRAVHYLHYIERYEDHTIYHDISLTFKRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDM 332
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASPS-TCK 309
AKV GS N ++ + F GL +Q++ VEF EE P +VASP +
Sbjct: 333 YAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALR 392
Query: 310 KDSSKAPDFTEVS-SW 324
KD + ++ W
Sbjct: 393 KDPEPEDEVPDIKLDW 408
Score = 130 (50.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 32/86 (37%), Positives = 48/86 (55%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIRGRELVQQT-RLPPDPDR-EAKLIALRDKQFQGKYRKT 63
+G I G+ WPGL+AP+++ + T R + ++ EA ++ R+ ++ K +
Sbjct: 128 RGQIIGEGRRGFLWPGLNAPLMKSGAIQTITQRSKEEQEKVEADMVQQRE-EWDRKRKMK 186
Query: 64 PPLERGWSGGKLGGRSLGPPDPVGEN 89
ERGWSG GG SLGPPDP G N
Sbjct: 187 VKRERGWSGNSWGGISLGPPDP-GPN 211
Score = 67 (28.6 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA E+W G + A +DLNRGQIIG
Sbjct: 94 TADELWKGALAETGAGARKGRGKRTKRKRRKDLNRGQIIG 133
>UNIPROTKB|E2RB92 [details] [associations]
symbol:MRPS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 CTD:64969
GeneTree:ENSGT00390000001878 OMA:RQETHQQ EMBL:AAEX03010899
RefSeq:XP_532953.3 Ensembl:ENSCAFT00000011298 GeneID:475746
KEGG:cfa:475746 Uniprot:E2RB92
Length = 430
Score = 402 (146.6 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 83/196 (42%), Positives = 114/196 (58%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T+D FDTRILE + VF M GR ++V LV GNG+G AGFA+GK+ + + R AK
Sbjct: 213 ETYDDFDTRILEVRNVFNMTAKEGRKKSVRVLVAVGNGRGAAGFAVGKATDRMDAFRKAK 272
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+DHT+ HD +F +T I ++K+P G GL CHR I IC+ +GIKD+
Sbjct: 273 NRAVHYLHYIERYEDHTIFHDISLRFKRTHIKMKKQPRGYGLRCHRAIITICRLIGIKDM 332
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASPS-TCK 309
AKV GS N + + F GL Q++ VEF EE P +VASP +
Sbjct: 333 YAKVSGSVNMLNLTRGLFHGLSHQETHQQLADKKSLHVVEFREECGPLPIVVASPQGALR 392
Query: 310 KDSSKAPDFTEVS-SW 324
KD + ++ W
Sbjct: 393 KDPELEDEVPDIKLDW 408
Score = 122 (48.0 bits), Expect = 1.4e-48, Sum P(2) = 1.4e-48
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIR--GRELVQQTRLPPDPDREAKLIALRDKQFQGKYRKT 63
+G I G+ WPGL+ P+++ + + Q EA +I R+ ++ K +
Sbjct: 128 RGQIIGEGRHGFLWPGLNVPLMKEGAMQTIAQRSKEEQEKVEADMIQQRE-EWDRKRKMK 186
Query: 64 PPLERGWSGGKLGGRSLGPPDP 85
ERGWSG GG SLGPPDP
Sbjct: 187 IKRERGWSGNTWGGVSLGPPDP 208
Score = 67 (28.6 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA E+W G + A +DLNRGQIIG
Sbjct: 94 TADELWKGALAETGAGARKGRGKRSKKKRKKDLNRGQIIG 133
>UNIPROTKB|P82675 [details] [associations]
symbol:MRPS5 "28S ribosomal protein S5, mitochondrial"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH471219 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 CTD:64969
HOGENOM:HOG000231482 HOVERGEN:HBG030178 OMA:RQETHQQ
OrthoDB:EOG4P2Q29 EMBL:AB049940 EMBL:AK058160 EMBL:AC092835
EMBL:BC000219 EMBL:BC014172 IPI:IPI00169400 IPI:IPI00215872
RefSeq:NP_114108.1 UniGene:Hs.655259 ProteinModelPortal:P82675
SMR:P82675 IntAct:P82675 STRING:P82675 PhosphoSite:P82675
DMDM:24212347 PaxDb:P82675 PeptideAtlas:P82675 PRIDE:P82675
DNASU:64969 Ensembl:ENST00000272418 Ensembl:ENST00000345084
GeneID:64969 KEGG:hsa:64969 UCSC:uc002sub.3 GeneCards:GC02M095752
HGNC:HGNC:14498 MIM:611972 neXtProt:NX_P82675 PharmGKB:PA31024
InParanoid:P82675 PhylomeDB:P82675 ChiTaRS:MRPS5 GenomeRNAi:64969
NextBio:67152 Bgee:P82675 CleanEx:HS_MRPS5 Genevestigator:P82675
GermOnline:ENSG00000144029 Uniprot:P82675
Length = 430
Score = 396 (144.5 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 80/196 (40%), Positives = 116/196 (59%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T++ FDTRILE + VF M GR +++ LV GNG+G AGF++GK+ + + R AK
Sbjct: 213 ETYEDFDTRILEVRNVFTMTAKEGRKKSIRVLVAVGNGKGAAGFSIGKATDRMDAFRKAK 272
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+DHT+ HD +F +T I ++K+P+G GL CHR I IC+ +GIKD+
Sbjct: 273 NRAVHHLHYIERYEDHTIFHDISLRFKRTHIKMKKQPKGYGLRCHRAIITICRLIGIKDM 332
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASP-STCK 309
AKV GS N ++ + F GL +Q++ VE EE P +VASP +
Sbjct: 333 YAKVSGSINMLSLTQGLFRGLSRQETHQQLADKKGLHVVEIREECGPLPIVVASPRGPLR 392
Query: 310 KDSSKAPDFTEVS-SW 324
KD + +V W
Sbjct: 393 KDPEPEDEVPDVKLDW 408
Score = 125 (49.1 bits), Expect = 2.9e-48, Sum P(2) = 2.9e-48
Identities = 30/82 (36%), Positives = 42/82 (51%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIRGR--ELVQQTRLPPDPDREAKLIALRDKQFQGKYRKT 63
+G I G+ WPGL+ P+++ + + Q EA +I R++ + K K
Sbjct: 128 RGQIIGEGRYGFLWPGLNVPLMKNGAVQTIAQRSKEEQEKVEADMIQQREEWDRKKKMKV 187
Query: 64 PPLERGWSGGKLGGRSLGPPDP 85
ERGWSG GG SLGPPDP
Sbjct: 188 KR-ERGWSGNSWGGISLGPPDP 208
Score = 68 (29.0 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 17/47 (36%), Positives = 21/47 (44%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIGIDTFDGF 136
TA E+W G + A +DLNRGQIIG + GF
Sbjct: 94 TADELWKGALAETGAGAKKGRGKRTKKKKRKDLNRGQIIGEGRY-GF 139
>UNIPROTKB|F1NYZ1 [details] [associations]
symbol:MRPS5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005739 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 GeneTree:ENSGT00390000001878 OMA:RQETHQQ
EMBL:AADN02041204 EMBL:AADN02041205 EMBL:AADN02041206
EMBL:AADN02041207 IPI:IPI00576037 Ensembl:ENSGALT00000013928
Uniprot:F1NYZ1
Length = 337
Score = 398 (145.2 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 85/210 (40%), Positives = 127/210 (60%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T++ F+TR++E K VFCMK GR +++ LV GNG+G AGFALGK+ + ++R AK
Sbjct: 120 ETYEDFETRVIEVKNVFCMKAKEGRKKSIRALVAVGNGKGAAGFALGKAGDRMNALRKAK 179
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
N+A + L +++ Y++HT+ HD +F +T I ++K+ +G GL CHR I ICK +GIKD+
Sbjct: 180 NKAIRSLHFIELYQNHTIYHDVTVKFKRTHIRMKKQNKGYGLRCHRAIITICKLIGIKDM 239
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASPS-TCK 309
AKV GS N I +A F GL QQ++ VEF EE P +VA P T +
Sbjct: 240 YAKVTGSKNLINITRALFKGLTQQETHQQLANQKNLYVVEFREEQGPLPIVVALPEGTVR 299
Query: 310 KD---SSKAPDFTEVSSWSYRPEIEERRKT 336
+D + PD T++ W E + +K+
Sbjct: 300 EDPEPEDEVPD-TKLE-WCEVKEAQGMKKS 327
Score = 112 (44.5 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 13 GKINIQWPGLSAPVIR-GRELVQQTRLPPDPDR-EAKLIALRDKQFQGKYRKTPPLERGW 70
G+ WPGL+AP+I+ GR R + D+ ++++I RD ++ K + E GW
Sbjct: 42 GRSGFLWPGLNAPLIKSGRVQTLTQRKKEERDKIQSEIIQQRDT-WEKKRKIKIKREGGW 100
Query: 71 SGGKLGGRSLGPPDPVGEN--TAKEIWAGVTGVSN 103
SG GG L PPDP G N T ++ V V N
Sbjct: 101 SGKCWGGVLLDPPDP-GPNGETYEDFETRVIEVKN 134
Score = 51 (23.0 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA+E+W G + ++LNRGQ IG
Sbjct: 1 TAEELWKGALAETGVGVRKGRGKRRKKKLKKNLNRGQEIG 40
>MGI|MGI:1924971 [details] [associations]
symbol:Mrps5 "mitochondrial ribosomal protein S5"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 MGI:MGI:1924971 GO:GO:0005739
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 CTD:64969
GeneTree:ENSGT00390000001878 HOGENOM:HOG000231482
HOVERGEN:HBG030178 OMA:RQETHQQ EMBL:AB049941 EMBL:AK083366
EMBL:BC021947 IPI:IPI00118196 RefSeq:NP_084239.1 UniGene:Mm.274601
UniGene:Mm.439980 ProteinModelPortal:Q99N87 SMR:Q99N87
PhosphoSite:Q99N87 PaxDb:Q99N87 PRIDE:Q99N87
Ensembl:ENSMUST00000028852 GeneID:77721 KEGG:mmu:77721
InParanoid:Q99N87 NextBio:347427 Bgee:Q99N87 CleanEx:MM_MRPS5
Genevestigator:Q99N87 GermOnline:ENSMUSG00000027374 Uniprot:Q99N87
Length = 432
Score = 386 (140.9 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 80/196 (40%), Positives = 113/196 (57%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T++ FDTRILE + VF M GR ++V LV GNG G AGFA+GK+ + + R AK
Sbjct: 215 ETYEDFDTRILEVRNVFNMTAKEGRKKSVRVLVAVGNGNGAAGFAIGKAADRGDAFRKAK 274
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+ HT+ HD +F +T+I ++K+P G GL CHR I IC+ +GIKD+
Sbjct: 275 NRAIHYLHYIERYEGHTIFHDISLRFKRTQIRMKKQPRGYGLRCHRAIITICRLIGIKDM 334
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASP-STCK 309
A+V GS N + + F GL +Q++ VEF EE P +VASP
Sbjct: 335 YARVTGSMNMLNLTRGLFHGLARQETHQHLADKKGLHVVEFREECGPLPIVVASPHGALS 394
Query: 310 KDSSKAPDFTEVS-SW 324
K+ P+ + W
Sbjct: 395 KEPEPEPEVPDTKLDW 410
Score = 121 (47.7 bits), Expect = 8.6e-47, Sum P(2) = 8.6e-47
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIRGRELVQQT--RLPPDPDR-EAKLIALRDKQFQGKYRK 62
+G I G+ WPGL+ P+I+ +VQ R + + EA ++ R+ ++ K +
Sbjct: 130 RGQIIGEGRSGFLWPGLNVPLIKSG-VVQNIGQRSKEEQQKVEATMVEQRE-EWDRKRKI 187
Query: 63 TPPLERGWSGGKLGGRSLGPPDPVGEN 89
ERGWSG GG S+GPPDP G N
Sbjct: 188 KVKRERGWSGNTWGGVSIGPPDP-GPN 213
Score = 72 (30.4 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 71 SGGKLGGRSLGPPDPVGENTAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
S G G+ P + TA+E+W G + A +DLNRGQIIG
Sbjct: 77 SPGNWTGQQCRPYSFFTKLTAEELWKGALAETGAGARKGRGKRTKKKKRKDLNRGQIIG 135
>RGD|1308318 [details] [associations]
symbol:Mrps5 "mitochondrial ribosomal protein S5" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
RGD:1308318 GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH473949
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 CTD:64969
GeneTree:ENSGT00390000001878 OMA:RQETHQQ OrthoDB:EOG4P2Q29
IPI:IPI00204522 RefSeq:NP_001099975.1 UniGene:Rn.9035
Ensembl:ENSRNOT00000020451 GeneID:296134 KEGG:rno:296134
UCSC:RGD:1308318 NextBio:640647 Uniprot:D3ZYT2
Length = 432
Score = 389 (142.0 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 81/196 (41%), Positives = 112/196 (57%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T++ FDTRILE + VF M GR ++V LV GNG G AGFA+GK+ + + R AK
Sbjct: 215 ETYEDFDTRILEVRNVFNMTAKEGRKKSVRVLVAVGNGNGAAGFAVGKAADRADAFRKAK 274
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY+ HT+ HD +F +T I ++K+P G GL CHR I IC+ +GIKD+
Sbjct: 275 NRAIHYLHYIERYEGHTIFHDISLRFKRTHIRMKKQPRGYGLRCHRAIITICRLIGIKDM 334
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASP-STCK 309
AKV GS N + + F GL +Q++ VEF EE P +VASP
Sbjct: 335 YAKVNGSVNMLNLTRGLFHGLARQETHQHLADKKGLHVVEFREECGPLPIVVASPHGALS 394
Query: 310 KDSSKAPDFTEVS-SW 324
K+ P+ + W
Sbjct: 395 KEPEPEPEVPDTKLDW 410
Score = 117 (46.2 bits), Expect = 1.1e-46, Sum P(2) = 1.1e-46
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 6 QGWIWNLGKINIQWPGLSAPVIRGRELVQQT--RLPPDPDR-EAKLIALRDKQFQGKYRK 62
+G I G+ WPGL+ P+I+ +VQ R + + EA + R+ ++ K +
Sbjct: 130 KGQIIGEGRSGFLWPGLNVPLIKSG-VVQNIGQRSKEEQQKVEADMAEQRE-EWDRKRKI 187
Query: 63 TPPLERGWSGGKLGGRSLGPPDPVGEN 89
ERGWSG GG S+GPPDP G N
Sbjct: 188 KVKRERGWSGNTWGGVSIGPPDP-GPN 213
Score = 66 (28.3 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA+E+W G + A +DLN+GQIIG
Sbjct: 96 TAEELWKGALAETGAGARKGRGKRTKKKKKKDLNKGQIIG 135
>ZFIN|ZDB-GENE-060929-264 [details] [associations]
symbol:mrps5 "mitochondrial ribosomal protein S5"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 ZFIN:ZDB-GENE-060929-264
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0098 PANTHER:PTHR13718
CTD:64969 HOGENOM:HOG000231482 HOVERGEN:HBG030178 OrthoDB:EOG4P2Q29
EMBL:BC124422 IPI:IPI00802826 RefSeq:NP_001070064.1
UniGene:Dr.79412 ProteinModelPortal:Q08C39 STRING:Q08C39
PRIDE:Q08C39 GeneID:562703 KEGG:dre:562703 InParanoid:Q08C39
NextBio:20884541 ArrayExpress:Q08C39 Bgee:Q08C39 Uniprot:Q08C39
Length = 397
Score = 391 (142.7 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 75/187 (40%), Positives = 113/187 (60%)
Query: 131 DTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAK 190
+T++ FD+R++E K+VF + R R++S LV GNG G+AGFALGK+ + A++R AK
Sbjct: 180 ETYEDFDSRVIELKSVFTVTPKESRKRSISALVAVGNGNGVAGFALGKAADRTAALRKAK 239
Query: 191 NRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDI 250
NRA L Y++RY D+T+ HD +++ KT + ++K+ +G GL CHR + +CK +GIKD+
Sbjct: 240 NRAMNYLYYIERYNDYTIYHDIESKYKKTTLRMKKQNKGYGLRCHRAVITLCKLIGIKDM 299
Query: 251 RAKVEGSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASPSTCKK 310
AKV+GS N I +A F GL Q++ VEF E P +VA P +
Sbjct: 300 YAKVDGSVNLLNITRALFQGLASQETHQTLADKKQLNVVEFRAEQGPLPIVVARPQLGAR 359
Query: 311 DSSKAPD 317
+ D
Sbjct: 360 QDPEVED 366
Score = 114 (45.2 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 13 GKINIQWPGLSAPVIRGRELVQQTRLPPDPDREAKLIALRDKQFQGKYRKTPPL--ERGW 70
G+ WPGL+ P+ + +Q+ + +++ AL ++ + + R+ + ERGW
Sbjct: 102 GRAGYLWPGLNTPIFKDGS-IQKPMQRGEAEQKEMTAALERQRDEWEKRRKAKIKKERGW 160
Query: 71 SGGKLGGRSLGPPDPVGEN 89
+GG GG SLGP DP G N
Sbjct: 161 TGGSWGGVSLGPLDP-GPN 178
Score = 63 (27.2 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 90 TAKEIWAGVTGVSNAXXXXXXXXXXXXLTARDLNRGQIIG 129
TA E+W GV+ + A +DLN+GQ +G
Sbjct: 61 TADELWRGVSAETGAGARKGRGKRAKRKVKKDLNKGQSLG 100
>WB|WBGene00008452 [details] [associations]
symbol:mrps-5 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0005739 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 GeneTree:ENSGT00390000001878 OMA:RQETHQQ
EMBL:Z81053 EMBL:Z78063 PIR:T20412 RefSeq:NP_506145.1
ProteinModelPortal:Q93425 SMR:Q93425 PaxDb:Q93425
EnsemblMetazoa:E02A10.1.1 EnsemblMetazoa:E02A10.1.2 GeneID:179721
KEGG:cel:CELE_E02A10.1 UCSC:E02A10.1.1 CTD:179721 WormBase:E02A10.1
HOGENOM:HOG000154212 InParanoid:Q93425 NextBio:906584
Uniprot:Q93425
Length = 418
Score = 336 (123.3 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 75/180 (41%), Positives = 104/180 (57%)
Query: 129 GIDTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMR- 187
G++ FD F+T LE K M GR T+S LVVTGNG+GLAG+A+GK+ R +
Sbjct: 128 GVN-FDDFETYCLEVKRTSNMTNVFGRVHTMSALVVTGNGRGLAGYAVGKAPIHRTTTAI 186
Query: 188 -NAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVG 246
N A +KL +V+ ++ T+ DFY + T++F +++P G GL CH + +IC+A+G
Sbjct: 187 INGMGMASRKLFHVELHEGRTIYQDFYAECRNTRVFAQRRPRGFGLTCHPRLIKICEAIG 246
Query: 247 IKDIRAKVEGST-NPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVASP 305
IKDI KVEGST N A+ AF GL+ Q++ VE S P IVASP
Sbjct: 247 IKDIYVKVEGSTKNYLALTHAFVTGLLNQETHQQLAERKGLHVVEMSPSRHFLPQIVASP 306
Score = 86 (35.3 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 31/87 (35%), Positives = 47/87 (54%)
Query: 15 INIQWPGLSAPVIRGRELVQQTRLP-----PDPDREA-----KLIALRDKQFQGKYR-KT 63
+ I++ GL+AP IR RE Q + D R++ K++ RD + + R K
Sbjct: 45 MKIEFAGLNAP-IRMRETENQNLMSIAEQTEDEIRDSMGGTKKILEERDTGKKKRNREKL 103
Query: 64 PPLERGWSGGKLGGRSLGPPDPV-GEN 89
P+ERG+SG +L G+ LG P P+ G N
Sbjct: 104 HPMERGFSGTQLVGQKLGAPPPLDGVN 130
>TAIR|locus:2010896 [details] [associations]
symbol:AT1G64880 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0006412 GO:GO:0005768
Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
GO:GO:0005802 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0098 PANTHER:PTHR13718
EMBL:BT014967 IPI:IPI00525420 RefSeq:NP_564842.1 UniGene:At.14814
ProteinModelPortal:Q6GKU7 SMR:Q6GKU7 STRING:Q6GKU7 PaxDb:Q6GKU7
PRIDE:Q6GKU7 EnsemblPlants:AT1G64880.1 GeneID:842796
KEGG:ath:AT1G64880 TAIR:At1g64880 HOGENOM:HOG000238709
InParanoid:Q6GKU7 OMA:CKVTKGG PhylomeDB:Q6GKU7
ProtClustDB:CLSN2689025 Genevestigator:Q6GKU7 Uniprot:Q6GKU7
Length = 515
Score = 233 (87.1 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 47/137 (34%), Positives = 78/137 (56%)
Query: 135 GFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAG 194
G+D +++ K V C GR + L+V GN +G+ G+A K+ G+++M+ A +
Sbjct: 357 GYDVHVIDVKKV-CKVTKGGRVERYTALMVCGNYEGIIGYAKAKAETGQSAMQKAYEKCF 415
Query: 195 QKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKV 254
Q L YV+R+++HT+ H T + KTK+++ P TG+ R+++ I G K+I++KV
Sbjct: 416 QNLHYVERHEEHTIAHAIQTSYKKTKLYLWPAPTTTGMKAGRVVKTILLLAGFKNIKSKV 475
Query: 255 EGSTNPQAIVKAFFLGL 271
GS N VKA L
Sbjct: 476 IGSRNSYNTVKAVLKAL 492
>CGD|CAL0003817 [details] [associations]
symbol:orf19.989 species:5476 "Candida albicans" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 EMBL:AACQ01000207
PANTHER:PTHR13718 RefSeq:XP_711230.1 ProteinModelPortal:Q59NE6
STRING:Q59NE6 GeneID:3647170 KEGG:cal:CaO19.8604 CGD:CAL0072407
Uniprot:Q59NE6
Length = 336
Score = 213 (80.0 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 48/129 (37%), Positives = 68/129 (52%)
Query: 149 MKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEG-RASMRNAKNRAGQKLIYVQRYKDHT 207
+K G L V G+ G+ G +GKS +G R + A A + L V RY+D T
Sbjct: 186 LKTAKGNIANFFVLSVAGDKNGMVGLGIGKSRDGIRTAATKAHWNAVKNLTPVYRYEDRT 245
Query: 208 VLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAF 267
+L F ++ TK+ P G GL C++ I EIC+A GIKD++ K+ S NP + F
Sbjct: 246 ILGSFEYKYHATKLKFSPAPVGFGLRCNKNIFEICQAAGIKDLKGKIYKSRNPLTVANGF 305
Query: 268 FLGLMQQKS 276
F L QQ+S
Sbjct: 306 FKALTQQRS 314
>TIGR_CMR|GSU_2840 [details] [associations]
symbol:GSU_2840 "ribosomal protein S5" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:NP_953883.1
ProteinModelPortal:Q749A4 SMR:Q749A4 GeneID:2686827
KEGG:gsu:GSU2840 PATRIC:22028527
BioCyc:GSUL243231:GH27-2799-MONOMER Uniprot:Q749A4
Length = 162
Score = 191 (72.3 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 42/123 (34%), Positives = 68/123 (55%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + S LVV G+G G G+ LGK+ E ++R +A + LI V + HT+ ++
Sbjct: 28 GRRFSFSALVVVGDGNGCVGYGLGKANEVPEAIRKGVEQAKKNLIKVPIVEGHTIPYEVL 87
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
FG ++ ++ GTG+I + + +A G+ ++ +K GS NP +VKA F GL Q
Sbjct: 88 GHFGAGRVLIKPASAGTGVIAGGAARAVFEAAGLHNVLSKCLGSNNPHNVVKAAFNGLAQ 147
Query: 274 QKS 276
+S
Sbjct: 148 LRS 150
>POMBASE|SPAC4G9.17c [details] [associations]
symbol:mrps5 "mitochondrial ribosomal protein subunit S5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 PomBase:SPAC4G9.17c EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0005763 KO:K02988
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
PIR:T38876 RefSeq:NP_593699.1 ProteinModelPortal:Q10234
STRING:Q10234 EnsemblFungi:SPAC4G9.17c.1 GeneID:2543504
KEGG:spo:SPAC4G9.17c OrthoDB:EOG451J17 NextBio:20804514
Uniprot:Q10234
Length = 387
Score = 206 (77.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
G+ ++ L V GN G+AGF GK+ + + + RA + ++Y+ RY TV +
Sbjct: 242 GKIASMYVLTVVGNRNGVAGFGEGKAESYSLAYKQSCGRAVKNMVYIPRYDKRTVYGVIH 301
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+F ++ + +P G GL C+ I+ EIC+ GIKDI ++ GS N VKA F L
Sbjct: 302 KKFHAVRLTLRSRPAGFGLRCNPILHEICRCAGIKDISGEILGSKNGMNTVKAMFEALQS 361
Query: 274 QK 275
Q+
Sbjct: 362 QR 363
>TIGR_CMR|SPO_0502 [details] [associations]
symbol:SPO_0502 "ribosomal protein S5" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_165764.1 ProteinModelPortal:Q5LW41
SMR:Q5LW41 GeneID:3195459 KEGG:sil:SPO0502 PATRIC:23374265
Uniprot:Q5LW41
Length = 190
Score = 186 (70.5 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 47/169 (27%), Positives = 83/169 (49%)
Query: 136 FDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQ 195
F R++ V K R+ + LVV G+ +G GF GK+ E ++R A +A +
Sbjct: 21 FADRLVAINRVSKTVKGGKRFG-FAALVVVGDQKGRVGFGKGKAKEVPEAIRKATEQAKR 79
Query: 196 KLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVE 255
++I VQ + T+ HD + G K+ + PEGTG+I ++ + + +G+KD+ +K
Sbjct: 80 QMIRVQLREGRTLHHDIEGRHGAGKVVMRAAPEGTGIIAGGPMRAVFEMLGVKDVVSKSL 139
Query: 256 GSTNPQAIVKAFFLGLMQQKSXXXXXXXXXXXXVEFSEENDNYPTIVAS 304
GS NP +++A GL +++S + + D P A+
Sbjct: 140 GSANPYNMIRATIDGLKKEQSPRSVAQRRGKKVADILPKRDEAPAAEAA 188
>TIGR_CMR|CBU_0255 [details] [associations]
symbol:CBU_0255 "ribosomal protein S5" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_819299.1 ProteinModelPortal:Q83EQ9
SMR:Q83EQ9 PRIDE:Q83EQ9 GeneID:1208136 KEGG:cbu:CBU_0255
PATRIC:17929203 BioCyc:CBUR227377:GJ7S-261-MONOMER Uniprot:Q83EQ9
Length = 168
Score = 180 (68.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 47/149 (31%), Positives = 78/149 (52%)
Query: 128 IGIDTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMR 187
IG T DG +++ + + K GR S LVV G+G G GF LGK+ E ++++
Sbjct: 6 IGTTT-DGIQEKLVAVRRTAKVVKG-GRVFGFSALVVAGDGDGKVGFGLGKAREVPSAIQ 63
Query: 188 NAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGI 247
A A + +I V Y T+ H + + + EGTG+I ++ I + +G+
Sbjct: 64 KATENARRNMISVPLY-GATLHHAIKATHASSTVLMLPASEGTGVIAGNAMRAIFEVMGV 122
Query: 248 KDIRAKVEGSTNPQAIVKAFFLGLMQQKS 276
+++ AK GS+NP +V+A F GL Q ++
Sbjct: 123 QNVLAKCIGSSNPINVVRATFKGLKQMET 151
>TIGR_CMR|CJE_1858 [details] [associations]
symbol:CJE_1858 "ribosomal protein S5" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005712 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_179828.1 ProteinModelPortal:Q5HSA7
SMR:Q5HSA7 STRING:Q5HSA7 GeneID:3232485 KEGG:cjr:CJE1858
PATRIC:20045548 OMA:YNASKIL BioCyc:CJEJ195099:GJC0-1897-MONOMER
Uniprot:Q5HSA7
Length = 147
Score = 167 (63.8 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 136 FDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQ 195
F+ I++ V + K R+R + LV+ GN +GL G GK+ E ++R A + A +
Sbjct: 9 FEEVIVDIGRVTKVVKGGRRFR-FTALVIVGNRKGLVGVGYGKAKEVPDAIRKAVDDAFK 67
Query: 196 KLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVE 255
++ V+ K T+ HD ++ ++I ++ EGTG+I + I + GIKDI K
Sbjct: 68 NIVEVKT-KGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSL 126
Query: 256 GSTNPQAIVKAFFLGLMQQK 275
GS N +V+A L K
Sbjct: 127 GSNNSANVVRATIKALTMLK 146
>TIGR_CMR|ECH_0426 [details] [associations]
symbol:ECH_0426 "ribosomal protein S5" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:YP_507244.1 ProteinModelPortal:Q2GH39
STRING:Q2GH39 GeneID:3927382 KEGG:ech:ECH_0426 PATRIC:20576329
BioCyc:ECHA205920:GJNR-427-MONOMER Uniprot:Q2GH39
Length = 174
Score = 166 (63.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 136 FDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQ 195
F I+ + V + K R+ + S LVV G+ +G G +GK +E + A N A +
Sbjct: 16 FSELIVSVRRVAKVVKGGRRF-SFSVLVVIGDEKGKVGCGIGKHLEVSEAKIKAVNAARK 74
Query: 196 KLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVE 255
+I V + T+ HD +F +K+ + GTG+I I+ I + +G++D+ AK
Sbjct: 75 NMIRVHLRESRTLHHDVKAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAKSI 134
Query: 256 GSTNPQAIVKAFFLGLMQQKS 276
GS+NP +V A F + S
Sbjct: 135 GSSNPHNVVYAVFAAFRKMLS 155
>TIGR_CMR|CPS_0618 [details] [associations]
symbol:CPS_0618 "ribosomal protein S5" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT HAMAP:MF_01307_B
RefSeq:YP_267368.1 ProteinModelPortal:Q488Z6 SMR:Q488Z6
STRING:Q488Z6 PRIDE:Q488Z6 GeneID:3519484 KEGG:cps:CPS_0618
PATRIC:21464563 BioCyc:CPSY167879:GI48-705-MONOMER Uniprot:Q488Z6
Length = 169
Score = 165 (63.1 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 36/123 (29%), Positives = 67/123 (54%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + + L V G+G G GF GK+ E A+++ A +A + ++ + K T+ H
Sbjct: 31 GRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKAHRNIVTID-LKGTTLQHVIT 89
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+ +K+F++ EGTG+I ++ + + G++++ +K GSTNP +V+A L+
Sbjct: 90 GKHSGSKVFMKPASEGTGIIAGGAMRAVLEVAGVQNVLSKAYGSTNPINVVRATVSALVN 149
Query: 274 QKS 276
S
Sbjct: 150 MHS 152
>UNIPROTKB|Q9KP01 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 163 (62.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/123 (29%), Positives = 67/123 (54%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + + L V G+G G GF GK+ E A+++ A +A + ++ + + T+ H
Sbjct: 29 GRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRSMVTIA-LNEGTLHHPVK 87
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+ +K++++ EGTG+I ++ + + G+ ++ +K GSTNP IV+A L+
Sbjct: 88 GRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVD 147
Query: 274 QKS 276
KS
Sbjct: 148 VKS 150
>TIGR_CMR|VC_2579 [details] [associations]
symbol:VC_2579 "ribosomal protein S5" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003735
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B PIR:E82057 RefSeq:NP_232207.1
ProteinModelPortal:Q9KP01 SMR:Q9KP01 PRIDE:Q9KP01 DNASU:2615596
GeneID:2615596 KEGG:vch:VC2579 PATRIC:20084184 Uniprot:Q9KP01
Length = 167
Score = 163 (62.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/123 (29%), Positives = 67/123 (54%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + + L V G+G G GF GK+ E A+++ A +A + ++ + + T+ H
Sbjct: 29 GRIMSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRSMVTIA-LNEGTLHHPVK 87
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+ +K++++ EGTG+I ++ + + G+ ++ +K GSTNP IV+A L+
Sbjct: 88 GRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVD 147
Query: 274 QKS 276
KS
Sbjct: 148 VKS 150
>UNIPROTKB|P0A7W1 [details] [associations]
symbol:rpsE "30S ribosomal subunit protein S5"
species:83333 "Escherichia coli K-12" [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0046677 "response to
antibiotic" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:X01563 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
Gene3D:3.30.160.20 GO:GO:0046677 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PDB:3FIH
PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW KO:K02988
GO:GO:0015935 PDB:3SFS PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:1EG0
PDBsum:1EG0 eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 PDB:4GAS
PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87
PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P
PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF
PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO
PDB:2VHP PDB:2WWL PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2Z4K PDBsum:2Z4M PDBsum:3DF1
PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M PDBsum:3I1O
PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21 PDBsum:3J0U
PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10 PDBsum:3J13
PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR PDBsum:3OFA
PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX PDBsum:3OFY
PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV PDBsum:4GAQ
PDBsum:4GD2 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
PIR:B65123 RefSeq:NP_417762.1 RefSeq:YP_492129.1
ProteinModelPortal:P0A7W1 SMR:P0A7W1 IntAct:P0A7W1 PaxDb:P0A7W1
PRIDE:P0A7W1 EnsemblBacteria:EBESCT00000004415
EnsemblBacteria:EBESCT00000014509 GeneID:12934414 GeneID:947795
KEGG:ecj:Y75_p3873 KEGG:eco:b3303 PATRIC:32122038 EchoBASE:EB0897
EcoGene:EG10904 BioCyc:EcoCyc:EG10904-MONOMER
BioCyc:ECOL316407:JW3265-MONOMER EvolutionaryTrace:P0A7W1
Genevestigator:P0A7W1 Uniprot:P0A7W1
Length = 167
Score = 161 (61.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 38/123 (30%), Positives = 65/123 (52%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + + L V G+G G GF GK+ E A+++ A +A + +I V + T+ H
Sbjct: 28 GRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVA-LNNGTLQHPVK 86
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+++F++ EGTG+I ++ + + G+ ++ AK GSTNP +V+A GL
Sbjct: 87 GVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLEN 146
Query: 274 QKS 276
S
Sbjct: 147 MNS 149
>TIGR_CMR|APH_0297 [details] [associations]
symbol:APH_0297 "ribosomal protein S5" species:212042
"Anaplasma phagocytophilum HZ" [GO:0000312 "plastid small ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 RefSeq:YP_504909.1 ProteinModelPortal:Q2GL42
SMR:Q2GL42 STRING:Q2GL42 GeneID:3931147 KEGG:aph:APH_0297
PATRIC:20949168 OMA:HNVVKAT ProtClustDB:PRK00550
BioCyc:APHA212042:GHPM-327-MONOMER HAMAP:MF_01307_B Uniprot:Q2GL42
Length = 173
Score = 157 (60.3 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 34/115 (29%), Positives = 61/115 (53%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + S LVV G+ +G G +GK E + A N A + +I V + T+ HD
Sbjct: 33 GRRFSFSVLVVVGDEKGRVGCGMGKHAEVAEAKIKAVNAAKKNMIRVYLRESRTLHHDVT 92
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFF 268
+F +++ + GTG+I ++ + + +G++D+ AK+ GS+N ++ A F
Sbjct: 93 AKFCASRVILRSAKVGTGIIAGGSVRAVFEVLGVQDVVAKIVGSSNAHTVIYAVF 147
>TIGR_CMR|BA_0127 [details] [associations]
symbol:BA_0127 "ribosomal protein S5" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:NP_842695.1
RefSeq:YP_016732.1 RefSeq:YP_026413.1 ProteinModelPortal:Q81VR3
SMR:Q81VR3 DNASU:1083790 EnsemblBacteria:EBBACT00000013084
EnsemblBacteria:EBBACT00000016262 EnsemblBacteria:EBBACT00000019813
GeneID:1083790 GeneID:2814389 GeneID:2850890 KEGG:ban:BA_0127
KEGG:bar:GBAA_0127 KEGG:bat:BAS0127
BioCyc:BANT260799:GJAJ-138-MONOMER
BioCyc:BANT261594:GJ7F-140-MONOMER Uniprot:Q81VR3
Length = 166
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/139 (30%), Positives = 70/139 (50%)
Query: 137 DTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQK 196
+ R++ V + K R+R + LVV G+ G GF GK+ E ++R A A +
Sbjct: 12 EERVVTINRVAKVVKGGRRFR-FAALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKN 70
Query: 197 LIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEG 256
LI V T+ H FG ++F++ EGTG+I ++ + + G++DI +K G
Sbjct: 71 LIAVPLVGT-TIPHTINGHFGAGEVFLKPAAEGTGVIAGGPVRAVLELAGVQDILSKSLG 129
Query: 257 STNPQAIVKAFFLGLMQQK 275
S P +++A GL + K
Sbjct: 130 SNTPINMIRATVNGLSELK 148
>TIGR_CMR|SO_0248 [details] [associations]
symbol:SO_0248 "ribosomal protein S5" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550
HAMAP:MF_01307_B RefSeq:NP_715888.1 ProteinModelPortal:P59124
SMR:P59124 GeneID:1168131 KEGG:son:SO_0248 PATRIC:23520189
Uniprot:P59124
Length = 167
Score = 153 (58.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 37/143 (25%), Positives = 74/143 (51%)
Query: 134 DGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRA 193
D +++ V + K GR + + L V G+G G G+ GK+ E A+++ A +A
Sbjct: 10 DDLQEKLIAVNRVSKVVKG-GRIFSFTALTVVGDGNGKVGYGYGKAREVPAAIQKAMEKA 68
Query: 194 GQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAK 253
+ ++ V+ T+ H + ++++++ +GTG+I ++ + + G+ ++ +K
Sbjct: 69 RRNMVTVE-LNAGTLHHPVKGRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSK 127
Query: 254 VEGSTNPQAIVKAFFLGLMQQKS 276
GSTNP IV+A L+ KS
Sbjct: 128 AYGSTNPINIVRATVDALVHMKS 150
>TIGR_CMR|NSE_0283 [details] [associations]
symbol:NSE_0283 "ribosomal protein S5" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 InterPro:IPR018192 PANTHER:PTHR13718
TIGRFAMs:TIGR01021 PROSITE:PS00585 ProtClustDB:PRK00550
HAMAP:MF_01307_B OMA:YNASKIL RefSeq:YP_506174.1
ProteinModelPortal:Q2GEC2 STRING:Q2GEC2 GeneID:3931470
KEGG:nse:NSE_0283 PATRIC:22680659
BioCyc:NSEN222891:GHFU-310-MONOMER Uniprot:Q2GEC2
Length = 172
Score = 149 (57.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 30/112 (26%), Positives = 59/112 (52%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + + G+ +G G+A K E + A +A +I + T+ HD +
Sbjct: 28 GRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGAMIRFPLREGRTIHHDCF 87
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVK 265
++ G +K+F++ PEGTG++ +++ C+ +G+ DI AK GS+ +++
Sbjct: 88 SKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGVSDIIAKSYGSSTSGIVIR 139
>ASPGD|ASPL0000056760 [details] [associations]
symbol:AN0142 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:BN001308 GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 KO:K02988 eggNOG:COG0098 PANTHER:PTHR13718
OrthoDB:EOG451J17 RefSeq:XP_657746.1 ProteinModelPortal:Q5BH38
EnsemblFungi:CADANIAT00002604 GeneID:2875908 KEGG:ani:AN0142.2
HOGENOM:HOG000175868 OMA:RPARCLF Uniprot:Q5BH38
Length = 437
Score = 114 (45.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 229 GTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQQK 275
G GL C +I E+C+A GI DI A+VE + NP VKA + LM Q+
Sbjct: 358 GFGLRCQSLIYEMCRAAGISDIAARVERARNPMNTVKAAYEALMSQR 404
Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 138 TRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKL 197
T+ L K V + G+ + L V GNG GL G GKS E + + RA + +
Sbjct: 250 TKALVVKQV-TNQTRLGKVNSTYILTVAGNGNGLLGIGEGKSQEATDARVQSLYRAIRNM 308
Query: 198 IYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEG 229
V RY++ T+ D + G ++ + +P G
Sbjct: 309 KPVPRYENRTIFGDVKGKVGAVELKLMTRPPG 340
>TIGR_CMR|CHY_2292 [details] [associations]
symbol:CHY_2292 "ribosomal protein S5" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 Gene3D:3.30.160.20
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988 GO:GO:0015935
eggNOG:COG0098 HOGENOM:HOG000072595 InterPro:IPR018192
PANTHER:PTHR13718 TIGRFAMs:TIGR01021 PROSITE:PS00585 OMA:HNVVKAT
ProtClustDB:PRK00550 HAMAP:MF_01307_B RefSeq:YP_361101.1
ProteinModelPortal:Q3A9T3 SMR:Q3A9T3 STRING:Q3A9T3 GeneID:3727429
KEGG:chy:CHY_2292 PATRIC:21277655
BioCyc:CHYD246194:GJCN-2291-MONOMER Uniprot:Q3A9T3
Length = 167
Score = 140 (54.3 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 38/123 (30%), Positives = 60/123 (48%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
GR + S LVV G+ +G G LGK+ E ++R A + LI V + T+ H+
Sbjct: 28 GRRFSFSALVVVGDQKGHVGVGLGKAPEVPDAIRKGIEDAKKNLIKVP-IVNTTIPHEII 86
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGLMQ 273
+ G K+ ++ GTG+I ++ I + G++DI K GS NP + A L
Sbjct: 87 GEAGAGKVLLKPAAPGTGVIAGSAVRAILEMAGVRDILTKSLGSNNPHNMAHATIEALKS 146
Query: 274 QKS 276
K+
Sbjct: 147 LKT 149
>TIGR_CMR|DET_0491 [details] [associations]
symbol:DET_0491 "ribosomal protein S5" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005712
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0019843
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 KO:K02988 GO:GO:0015935 eggNOG:COG0098
HOGENOM:HOG000072595 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 OMA:HNVVKAT ProtClustDB:PRK00550 HAMAP:MF_01307_B
RefSeq:YP_181235.1 ProteinModelPortal:Q3Z964 STRING:Q3Z964
GeneID:3230239 KEGG:det:DET0491 PATRIC:21608051
BioCyc:DETH243164:GJNF-491-MONOMER Uniprot:Q3Z964
Length = 172
Score = 139 (54.0 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 154 GRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFY 213
G+ + LVVTG+G+ G +GK+ E +++ A A + L + TV H+
Sbjct: 32 GKRMGFAALVVTGDGKNHVGIGVGKAKEVPSAISKASANAKRNLSRIL-LNGTTVPHEIV 90
Query: 214 TQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAKVEGSTNPQAIVKAFFLGL 271
++G ++ ++ GTG+I ++ + ++ GIKDI K G +N + KA GL
Sbjct: 91 FKYGAAQVLLKPAAPGTGIIAGGSVRAVLESTGIKDILTKSMGCSNKANVAKATLGGL 148
>SGD|S000000455 [details] [associations]
symbol:MRPS5 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;IPI] [GO:0032543
"mitochondrial translation" evidence=IC] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IPI] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 SGD:S000000455
InterPro:IPR014720 Gene3D:3.30.160.20 EMBL:BK006936 GO:GO:0003723
GO:GO:0003735 GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:L20296 GO:GO:0005763
RefSeq:NP_009810.3 GeneID:852553 KEGG:sce:YBR251W KO:K02988
RefSeq:NP_009814.3 GeneID:852557 KEGG:sce:YBR255W eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
GeneTree:ENSGT00390000001878 OrthoDB:EOG451J17 EMBL:Z36120
PIR:S38374 ProteinModelPortal:P33759 SMR:P33759 DIP:DIP-2869N
IntAct:P33759 MINT:MINT-615779 STRING:P33759 PaxDb:P33759
PeptideAtlas:P33759 EnsemblFungi:YBR251W CYGD:YBR251w
HOGENOM:HOG000247984 OMA:ICECAGI NextBio:971646
Genevestigator:P33759 GermOnline:YBR251W Uniprot:P33759
Length = 307
Score = 139 (54.0 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 45/143 (31%), Positives = 69/143 (48%)
Query: 129 GIDTFDGFDTRILEYKAVFCMKKNS-----GRYRTVSTLVVTGNGQGLAGFALGKSVEGR 183
G+D + TR L K + MK+ S G+ + LVV G+ G+ G GKS E
Sbjct: 134 GVDP--DYITRKLTMKPLV-MKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEM 190
Query: 184 A-SMRNAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEIC 242
+ ++ A A + L + RY++ T+ D ++ K+ + G GL + +I EIC
Sbjct: 191 SKAIFKAHWDAVRNLKEIPRYENRTIYGDIDFRYHGVKLHLRSAKPGFGLRVNHVIFEIC 250
Query: 243 KAVGIKDIRAKVEGSTNPQAIVK 265
+ GIKD+ KV S N I K
Sbjct: 251 ECAGIKDLSGKVYKSRNDMNIAK 273
>TAIR|locus:2057645 [details] [associations]
symbol:EMB3113 "EMBRYO DEFECTIVE 3113" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0009409
"response to cold" evidence=IEP;RCA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0016020 "membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0045036 "protein targeting to
chloroplast" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005634 GO:GO:0046686
GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009409 Gene3D:3.30.160.20 GO:GO:0003735 GO:GO:0009535
GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U78721 KO:K02988
GO:GO:0015935 EMBL:AY093289 EMBL:AY054523 EMBL:AY087734
IPI:IPI00526383 PIR:G84749 RefSeq:NP_180936.1 UniGene:At.24873
HSSP:Q5SHQ5 ProteinModelPortal:P93014 SMR:P93014 STRING:P93014
World-2DPAGE:0003:P93014 PaxDb:P93014 PRIDE:P93014 ProMEX:P93014
EnsemblPlants:AT2G33800.1 GeneID:817947 KEGG:ath:AT2G33800
GeneFarm:35 TAIR:At2g33800 eggNOG:COG0098 HOGENOM:HOG000072595
InParanoid:P93014 OMA:NARATIK PhylomeDB:P93014
ProtClustDB:CLSN2683512 Genevestigator:P93014 GermOnline:AT2G33800
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 Uniprot:P93014
Length = 303
Score = 127 (49.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/142 (23%), Positives = 65/142 (45%)
Query: 134 DGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKSVEGRASMRNAKNRA 193
DGF+ R+++ + V + K G+ +VV G+ QG G K+ E A+++ + A
Sbjct: 145 DGFEERVVQVRRVTKVVKG-GKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDA 203
Query: 194 GQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQEICKAVGIKDIRAK 253
+ ++ V K T H +G K+ + GTG+I ++ + + G+++ K
Sbjct: 204 RRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGK 263
Query: 254 VEGSTNPQAIVKAFFLGLMQQK 275
GS N +A + Q +
Sbjct: 264 QLGSNNALNNARATLAAVQQMR 285
>UNIPROTKB|P66574 [details] [associations]
symbol:rpsE "30S ribosomal protein S5" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005712 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 Gene3D:3.30.160.20
EMBL:BX842574 GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 KO:K02988
GO:GO:0015935 eggNOG:COG0098 HOGENOM:HOG000072595
InterPro:IPR018192 PANTHER:PTHR13718 TIGRFAMs:TIGR01021
PROSITE:PS00585 ProtClustDB:PRK00550 HAMAP:MF_01307_B PIR:D70644
RefSeq:NP_215235.1 RefSeq:NP_335166.1 RefSeq:YP_006514065.1
ProteinModelPortal:P66574 SMR:P66574 PRIDE:P66574
EnsemblBacteria:EBMYCT00000001380 EnsemblBacteria:EBMYCT00000069406
GeneID:13318610 GeneID:888465 GeneID:926039 KEGG:mtc:MT0746
KEGG:mtu:Rv0721 KEGG:mtv:RVBD_0721 PATRIC:18123375
TubercuList:Rv0721 OMA:QNEGREG Uniprot:P66574
Length = 220
Score = 110 (43.8 bits), Expect = 0.00056, P = 0.00056
Identities = 36/147 (24%), Positives = 60/147 (40%)
Query: 120 RDLNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRTVSTLVVTGNGQGLAGFALGKS 179
RD RG + R++ V + K R+ + + LV+ G+G G+ G GK+
Sbjct: 26 RDSGRGSRERDGEKSNYLERVVAINRVSKVVKGGRRF-SFTALVIVGDGNGMVGVGYGKA 84
Query: 180 VEGRASMRNAKNRAGQKLIYVQRYKDHTVLHDFYTQFGKTKIFVEKKPEGTGLICHRIIQ 239
E A++ A + V T+ H + + + GTG+I +
Sbjct: 85 KEVPAAIAKGVEEARKSFFRVPLIGG-TITHPVQGEAAAGVVLLRPASPGTGVIAGGAAR 143
Query: 240 EICKAVGIKDIRAKVEGSTNPQAIVKA 266
+ + G+ DI AK GS N +V A
Sbjct: 144 AVLECAGVHDILAKSLGSDNAINVVHA 170
>SGD|S000003091 [details] [associations]
symbol:RPS2 "Protein component of the small (40S) subunit"
species:4932 "Saccharomyces cerevisiae" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0045903
"positive regulation of translational fidelity" evidence=IMP]
[GO:0070181 "SSU rRNA binding" evidence=IDA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA export
from nucleus" evidence=IMP] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 SGD:S000003091 InterPro:IPR014720 GO:GO:0005730
EMBL:BK006941 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0032040 GO:GO:0070181
GO:GO:0045903 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G EMBL:X94106 GO:GO:0006407 eggNOG:COG0098
InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585 PDB:1K5X
PDBsum:1K5X HOGENOM:HOG000072596 KO:K02981 OMA:FSMAPFQ
TIGRFAMs:TIGR01020 GeneTree:ENSGT00390000001433 OrthoDB:EOG4T1MWN
EMBL:M59375 EMBL:Z72645 EMBL:AY557815 PIR:A36363 RefSeq:NP_011392.1
ProteinModelPortal:P25443 SMR:P25443 IntAct:P25443 STRING:P25443
PaxDb:P25443 PeptideAtlas:P25443 EnsemblFungi:YGL123W GeneID:852754
KEGG:sce:YGL123W EvolutionaryTrace:P25443 NextBio:972192
Genevestigator:P25443 GermOnline:YGL123W Uniprot:P25443
Length = 254
Score = 111 (44.1 bits), Expect = 0.00064, P = 0.00064
Identities = 49/220 (22%), Positives = 92/220 (41%)
Query: 64 PPLERGWSGGKLGGRSLGPPDPVG-ENTAKEIWAGVTGVSN-AXXXXXXXXXXXXLTARD 121
P ++ GG GGR+ G P+ G NT ++ W VT + L +
Sbjct: 4 PEAQQQKRGG-FGGRNRGRPNRRGPRNTEEKGWVPVTKLGRLVKAGKITTIEEIFLHSLP 62
Query: 122 LNRGQIIGIDTF-DGFDTRILEYKAVFCMKKNSGRYRT-VSTLVVTGNGQGLAGFALGKS 179
+ QII DT G ++ K V K+ RT +VV G+ G G + +
Sbjct: 63 VKEFQII--DTLLPGLQDEVMNIKPV--QKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTA 118
Query: 180 VEGRASMRNAKNRAGQKLIYVQR-Y------KDHTVLHDFYTQFGKTKIFVEKKPEGTGL 232
E ++R A +I ++R Y + H++ + G + + P G+G+
Sbjct: 119 KEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGI 178
Query: 233 ICHRIIQEICKAVGIKDIRAKVEGSTNP-QAIVKAFFLGL 271
+ ++++ + G++D+ + G T + +KA F+ +
Sbjct: 179 VASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAI 218
>TAIR|locus:2016585 [details] [associations]
symbol:XW6 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISS;IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR000851 InterPro:IPR005324 InterPro:IPR005711
InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881
InterPro:IPR014720 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0009506 GO:GO:0009507 GO:GO:0006412
Gene3D:3.30.160.20 EMBL:AB077822 EMBL:AC008051 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC082643 GO:GO:0022627
eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718 PROSITE:PS00585
EMBL:AB008016 EMBL:AF386958 EMBL:AY072528 EMBL:AY088743
IPI:IPI00521681 PIR:T50673 RefSeq:NP_176134.1 UniGene:At.23094
UniGene:At.23348 UniGene:At.70116 HSSP:P02357
ProteinModelPortal:Q8L8Y0 SMR:Q8L8Y0 STRING:Q8L8Y0
EnsemblPlants:AT1G58380.1 GeneID:842207 KEGG:ath:AT1G58380
TAIR:At1g58380 HOGENOM:HOG000072596 InParanoid:Q8L8Y0 KO:K02981
OMA:FSMAPFQ PhylomeDB:Q8L8Y0 ProtClustDB:CLSN2679407
Genevestigator:Q8L8Y0 GermOnline:AT1G58380 TIGRFAMs:TIGR01020
Uniprot:Q8L8Y0
Length = 284
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 57/216 (26%), Positives = 86/216 (39%)
Query: 68 RGWSGGKLGGRSL--GPPDPV--GENTAKEI-WAGVTGVSN-AXXXXXXXXXXXXLTARD 121
RG+ GG+ GGR GP G ++E W VT + L +
Sbjct: 21 RGFGGGRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQIYLHSLP 80
Query: 122 LNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRT-VSTLVVTGNGQGLAGFALGKSV 180
+ QII D G + K + K+ RT VV G+G G G + S
Sbjct: 81 VKEYQII--DHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSK 138
Query: 181 EGRASMRNAKNRAGQKLIYVQR-Y------KDHTVLHDFYTQFGKTKIFVEKKPEGTGLI 233
E ++R A A ++ V+R Y K HTV + G + + P G+G++
Sbjct: 139 EVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIV 198
Query: 234 CHRIIQEICKAVGIKDIRAKVEGSTNPQA-IVKAFF 268
R+ +++ + GI D+ GST VKA F
Sbjct: 199 AARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF 234
>TAIR|locus:504956181 [details] [associations]
symbol:AT1G58684 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 57/216 (26%), Positives = 86/216 (39%)
Query: 68 RGWSGGKLGGRSL--GPPDPV--GENTAKEI-WAGVTGVSN-AXXXXXXXXXXXXLTARD 121
RG+ GG+ GGR GP G ++E W VT + L +
Sbjct: 21 RGFGGGRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQIYLHSLP 80
Query: 122 LNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRT-VSTLVVTGNGQGLAGFALGKSV 180
+ QII D G + K + K+ RT VV G+G G G + S
Sbjct: 81 VKEYQII--DHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSK 138
Query: 181 EGRASMRNAKNRAGQKLIYVQR-Y------KDHTVLHDFYTQFGKTKIFVEKKPEGTGLI 233
E ++R A A ++ V+R Y K HTV + G + + P G+G++
Sbjct: 139 EVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIV 198
Query: 234 CHRIIQEICKAVGIKDIRAKVEGSTNPQA-IVKAFF 268
R+ +++ + GI D+ GST VKA F
Sbjct: 199 AARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF 234
>TAIR|locus:2826988 [details] [associations]
symbol:AT1G58983 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0005618 "cell wall" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR000851 InterPro:IPR005324
InterPro:IPR005711 InterPro:IPR013810 Pfam:PF00333 Pfam:PF03719
PROSITE:PS50881 InterPro:IPR014720 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618 GO:GO:0016020
GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723 GO:GO:0003735
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036 GO:GO:0022627
EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192 PANTHER:PTHR13718
PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348 UniGene:At.70116
HSSP:P02357 HOGENOM:HOG000072596 KO:K02981 ProtClustDB:CLSN2679407
TIGRFAMs:TIGR01020 EMBL:AY065030 EMBL:AY120723 EMBL:AY133659
EMBL:AK220575 EMBL:BT025727 EMBL:AB008017 IPI:IPI00528173
PIR:T52466 RefSeq:NP_564737.1 RefSeq:NP_564740.1 RefSeq:NP_683443.1
UniGene:At.72872 UniGene:At.74837 ProteinModelPortal:Q93VB8
SMR:Q93VB8 IntAct:Q93VB8 STRING:Q93VB8 EnsemblPlants:AT1G58684.1
EnsemblPlants:AT1G58983.1 EnsemblPlants:AT1G59359.1 GeneID:842222
GeneID:842229 GeneID:842237 KEGG:ath:AT1G58684 KEGG:ath:AT1G58983
KEGG:ath:AT1G59359 TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359
InParanoid:Q93VB8 OMA:NPGVEAP PhylomeDB:Q93VB8
Genevestigator:Q93VB8 GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 57/216 (26%), Positives = 86/216 (39%)
Query: 68 RGWSGGKLGGRSL--GPPDPV--GENTAKEI-WAGVTGVSN-AXXXXXXXXXXXXLTARD 121
RG+ GG+ GGR GP G ++E W VT + L +
Sbjct: 21 RGFGGGRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQIYLHSLP 80
Query: 122 LNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRT-VSTLVVTGNGQGLAGFALGKSV 180
+ QII D G + K + K+ RT VV G+G G G + S
Sbjct: 81 VKEYQII--DHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSK 138
Query: 181 EGRASMRNAKNRAGQKLIYVQR-Y------KDHTVLHDFYTQFGKTKIFVEKKPEGTGLI 233
E ++R A A ++ V+R Y K HTV + G + + P G+G++
Sbjct: 139 EVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIV 198
Query: 234 CHRIIQEICKAVGIKDIRAKVEGSTNPQA-IVKAFF 268
R+ +++ + GI D+ GST VKA F
Sbjct: 199 AARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF 234
>TAIR|locus:2826968 [details] [associations]
symbol:AT1G59359 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000851
InterPro:IPR005324 InterPro:IPR005711 InterPro:IPR013810
Pfam:PF00333 Pfam:PF03719 PROSITE:PS50881 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0005618
GO:GO:0016020 GO:GO:0006412 Gene3D:3.30.160.20 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AB078516 EMBL:AC027036
GO:GO:0022627 EMBL:AB076984 eggNOG:COG0098 InterPro:IPR018192
PANTHER:PTHR13718 PROSITE:PS00585 UniGene:At.23094 UniGene:At.23348
UniGene:At.70116 HSSP:P02357 HOGENOM:HOG000072596 KO:K02981
ProtClustDB:CLSN2679407 TIGRFAMs:TIGR01020 EMBL:AY065030
EMBL:AY120723 EMBL:AY133659 EMBL:AK220575 EMBL:BT025727
EMBL:AB008017 IPI:IPI00528173 PIR:T52466 RefSeq:NP_564737.1
RefSeq:NP_564740.1 RefSeq:NP_683443.1 UniGene:At.72872
UniGene:At.74837 ProteinModelPortal:Q93VB8 SMR:Q93VB8 IntAct:Q93VB8
STRING:Q93VB8 EnsemblPlants:AT1G58684.1 EnsemblPlants:AT1G58983.1
EnsemblPlants:AT1G59359.1 GeneID:842222 GeneID:842229 GeneID:842237
KEGG:ath:AT1G58684 KEGG:ath:AT1G58983 KEGG:ath:AT1G59359
TAIR:At1g58684 TAIR:At1g58983 TAIR:At1g59359 InParanoid:Q93VB8
OMA:NPGVEAP PhylomeDB:Q93VB8 Genevestigator:Q93VB8
GermOnline:AT1G59359 Uniprot:Q93VB8
Length = 284
Score = 111 (44.1 bits), Expect = 0.00082, P = 0.00082
Identities = 57/216 (26%), Positives = 86/216 (39%)
Query: 68 RGWSGGKLGGRSL--GPPDPV--GENTAKEI-WAGVTGVSN-AXXXXXXXXXXXXLTARD 121
RG+ GG+ GGR GP G ++E W VT + L +
Sbjct: 21 RGFGGGRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKLGRLVADNKITKLEQIYLHSLP 80
Query: 122 LNRGQIIGIDTFDGFDTRILEYKAVFCMKKNSGRYRT-VSTLVVTGNGQGLAGFALGKSV 180
+ QII D G + K + K+ RT VV G+G G G + S
Sbjct: 81 VKEYQII--DHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSK 138
Query: 181 EGRASMRNAKNRAGQKLIYVQR-Y------KDHTVLHDFYTQFGKTKIFVEKKPEGTGLI 233
E ++R A A ++ V+R Y K HTV + G + + P G+G++
Sbjct: 139 EVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIV 198
Query: 234 CHRIIQEICKAVGIKDIRAKVEGSTNPQA-IVKAFF 268
R+ +++ + GI D+ GST VKA F
Sbjct: 199 AARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATF 234
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 337 313 0.00081 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 616 (65 KB)
Total size of DFA: 223 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 23.95u 0.07s 24.02t Elapsed: 00:00:05
Total cpu time: 23.96u 0.07s 24.03t Elapsed: 00:00:07
Start: Thu Aug 15 10:57:37 2013 End: Thu Aug 15 10:57:44 2013