Query psy10169
Match_columns 390
No_of_seqs 423 out of 2214
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 19:35:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w0r_A Properdin, factor P; X- 100.0 4.9E-40 1.7E-44 329.1 24.5 278 74-388 63-381 (442)
2 1w0r_A Properdin, factor P; X- 100.0 2E-37 6.9E-42 310.2 22.7 262 74-379 17-302 (442)
3 3r6b_A Thrombospondin-1; cell 99.7 4.9E-19 1.7E-23 151.8 4.2 134 125-268 13-149 (153)
4 3r6b_A Thrombospondin-1; cell 99.7 1.5E-18 5.1E-23 148.8 5.6 129 186-325 13-145 (153)
5 1lsl_A Thrombospondin 1; TSP-1 99.7 2.2E-18 7.7E-23 140.2 5.7 106 186-302 4-113 (113)
6 1lsl_A Thrombospondin 1; TSP-1 99.7 1.4E-18 4.9E-23 141.4 4.4 107 125-241 4-113 (113)
7 3ghm_A A disintegrin and metal 99.3 9.8E-13 3.4E-17 128.8 4.9 72 1-73 270-373 (410)
8 3t5o_A Complement component C6 99.1 1.1E-11 3.7E-16 134.2 3.1 128 188-332 7-140 (913)
9 3t5o_A Complement component C6 99.1 2E-11 6.7E-16 132.2 0.6 77 244-330 7-86 (913)
10 2bbx_A Trap, thrombospondin-re 98.8 2.1E-09 7E-14 73.3 2.0 45 124-183 3-48 (49)
11 1vex_A F-spondin; TSR, cell ad 98.7 6.4E-09 2.2E-13 73.0 3.5 48 188-242 9-56 (56)
12 1vex_A F-spondin; TSR, cell ad 98.6 2.5E-08 8.5E-13 69.9 3.9 48 244-303 9-56 (56)
13 2bbx_A Trap, thrombospondin-re 98.6 2E-08 6.9E-13 68.3 2.7 43 188-243 7-49 (49)
14 3vdj_A Circumsporozoite (CS) p 98.6 1.3E-08 4.4E-13 74.4 1.2 50 305-356 20-70 (77)
15 1szl_A F-spondin; TSR, cell ad 98.5 3.2E-08 1.1E-12 70.6 1.8 48 128-184 10-58 (61)
16 1szl_A F-spondin; TSR, cell ad 98.4 1.4E-07 4.9E-12 67.2 2.5 49 244-304 9-58 (61)
17 2rjq_A Adamts-5; metalloprotea 98.3 1E-07 3.5E-12 93.2 0.0 66 125-196 308-375 (378)
18 3vdj_A Circumsporozoite (CS) p 98.2 1.1E-07 3.8E-12 69.5 -0.6 51 186-243 20-71 (77)
19 2rjq_A Adamts-5; metalloprotea 98.1 4.9E-07 1.7E-11 88.3 0.0 66 185-254 307-375 (378)
20 4hqf_A Thrombospondin-related 97.8 2.7E-06 9.4E-11 79.4 0.2 42 128-184 222-263 (281)
21 4hqf_A Thrombospondin-related 97.6 8.2E-06 2.8E-10 76.1 0.0 45 188-245 221-265 (281)
22 3ghm_A A disintegrin and metal 97.6 1.8E-05 6.1E-10 77.4 2.3 53 186-242 102-155 (410)
23 3ojy_A Complement component C8 96.7 0.0011 3.7E-08 67.6 4.2 90 174-296 464-554 (554)
24 3ojy_A Complement component C8 96.4 0.0016 5.5E-08 66.3 3.8 74 232-336 464-539 (554)
25 4hqo_A Sporozoite surface prot 96.0 0.0016 5.6E-08 59.9 1.2 26 305-332 218-243 (266)
26 4hqo_A Sporozoite surface prot 96.0 0.0015 5E-08 60.2 0.7 45 186-243 215-260 (266)
27 3ojy_B Complement component C8 92.2 0.062 2.1E-06 54.5 2.8 45 243-297 492-537 (537)
28 3ojy_B Complement component C8 90.5 0.16 5.4E-06 51.5 3.7 49 244-303 15-63 (537)
29 1mkc_A Protein (midkine); hepa 32.3 36 0.0012 21.6 2.7 23 126-150 3-25 (43)
No 1
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A
Probab=100.00 E-value=4.9e-40 Score=329.12 Aligned_cols=278 Identities=21% Similarity=0.472 Sum_probs=213.7
Q ss_pred CCCCCCcEEEEEEEEEEecCCCCeeeecCCCCCC-CC----CCCCCCCCCCCCCCC--ccc-cCCCcccccccCCCceEE
Q psy10169 74 DHLCGDGKQKRSVKCYREDKDGHREVVPDSACNE-EK----PESEKPCNLRPCEGV--DWL-TSEWTGCDHLCGDGKQKR 145 (390)
Q Consensus 74 ~~~CG~G~q~r~~~C~~~~~~g~~~~v~~~~C~~-~~----P~~~~~C~~~~C~~~--~W~-~~~Ws~CS~tCG~G~q~R 145 (390)
+.+||+|+|+|.+.|+.. +..|.. .+ +.+.+.||.++|.+. .|. |++|++||++||.|+|+|
T Consensus 63 S~tCG~G~q~R~r~C~~~----------~~~C~~~~~~~~~~~~~~~C~~~~Ccp~~~~W~~W~~Ws~CS~tCG~G~q~R 132 (442)
T 1w0r_A 63 SVTCSEGSQLRYRRCVGW----------NGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTR 132 (442)
T ss_pred cCccCCcEEEEEEEeecC----------CCCCCCcccCCCCccccccccCCccCCCCCceeeCCCCCCCCCCCCCCceEE
Confidence 778999999999999853 245766 33 457789999997332 585 799999999999999999
Q ss_pred EEEeeecCCCCCeeecCCCCCCCCCCCCccccC-CCCCcc-cce-eeccccccccccCCCc----EEEEEEeeCCCCc-c
Q psy10169 146 SVKCYREDKDGHREVVPDSACNEEKPESEKPCN-LRPCEG-VDW-LTSEWTGCEEKCGSSL----ETRTAVCATKNGK-I 217 (390)
Q Consensus 146 ~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~-~~~C~~-~~W-~~~~Ws~CS~sCG~G~----~~R~v~C~~~~~~-~ 217 (390)
.|.|+..... .+..|.+. +.+.+.|+ ..+|+. ..| .|++|++||++||.|+ |+|.|.|.+..+. .
T Consensus 133 ~r~C~~~~~~------~~~~C~g~-~~~~~~C~~~~~Cp~~~~W~~Ws~WS~CS~tCG~G~~~~~q~R~r~C~~~~~~~~ 205 (442)
T 1w0r_A 133 RRACNHPAPK------CGGHCPGQ-AQESEACDTQQVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQK 205 (442)
T ss_pred EEEeCCcCCC------CCCCCCCC-cceecCCCCcCccccccccceecccccCCccCCCCCccCceEEEEEecCCCcCcc
Confidence 9999876321 35688764 57899999 889984 348 6699999999999999 9999999986543 2
Q ss_pred ccCCcccCCCCCccccccCCCCC-CCC--Cccc-cCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCcc
Q psy10169 218 YPESFCLKAKTPELQRECESPPP-CEH--QWYA-TQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNAT 293 (390)
Q Consensus 218 ~~~~~C~~~~~p~~~~~C~~~~~-C~~--~W~~-s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~ 293 (390)
+++..|.+ .+.+++.|+. .+ ||. .|.. ++||+||++||.|+|+|.|.|.+.... +++..|.+. +.++
T Consensus 206 ~~g~~C~g--~~~e~~~C~~-~~~Cp~~g~W~~Ws~WS~CS~tCG~G~q~R~r~C~~~~p~----~gg~~C~g~--~~~~ 276 (442)
T 1w0r_A 206 PPGKPCPG--LAYEQRRCTG-LPPCPVAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQ----HGGPFCAGD--ATRT 276 (442)
T ss_pred CCCcCCCC--CcceeEeecc-cCCcccccccccccccCCcCCccCCCceeeEEEeCCCCCC----CCCCCCCCC--Ccce
Confidence 46788987 4477899998 55 986 6776 999999999999999999999875543 577899874 4588
Q ss_pred ccCCCCCCCC--CCccc-cCCccccc------ccC--CCEEEEEecCCCCCCCCCCCcccCCcccccccccccccccccc
Q psy10169 294 KNCTSSQVCK--GHWMS-GPWSKCSK------TYG--GGTMVSRTARDEVIPVEPTGKVAEADEEEECEEEEEEGEETVN 362 (390)
Q Consensus 294 ~~C~~~~~Cp--~~W~~-s~Ws~CS~------tCG--~G~q~R~r~c~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 362 (390)
+.|+...+|| +.|.. ++||.||+ +|| .|+|+|.|.|..... +. ..|.+...+.+.|.+
T Consensus 277 ~~C~~~~~Cp~~g~W~~Ws~Ws~Cs~~~~~~~tCg~~~G~q~R~r~C~~~~~---------~g--~~C~g~~~~~~~C~~ 345 (442)
T 1w0r_A 277 HICNTAVPCPVDGEWDSWGEWSPCIRRNMKSISCQEIPGQQSRGRTCRGRKF---------DG--HRCAGQQQDIRHCYS 345 (442)
T ss_pred eeCCCCCCCCCCCEecCCCCcCCCCCCccccCccCCCCCEEEEEEEecCCcC---------CC--cccCCCChhhccccC
Confidence 9999833798 36776 99999999 998 799999999975311 11 135544444444433
Q ss_pred CC----CCCCccccccccCC------CceeeeecCC
Q psy10169 363 ND----TDEWTVDYVWTQLN------GYSLGLDICP 388 (390)
Q Consensus 363 ~~----~~~ws~ws~W~~~~------~~~~~~~~~~ 388 (390)
.. .+.|+.|+.|+.|. |...+.+.|-
T Consensus 346 ~~~Cp~~~~W~~Ws~Ws~Cs~tCG~~G~~~R~r~C~ 381 (442)
T 1w0r_A 346 IQHCPLKGSWSEWSTWGLCMPPCGPNPTRARQRLCT 381 (442)
T ss_pred CCCCCCCCeecCcCCccccCCCcCCCCeEEEEEECC
Confidence 21 46999999999983 3345555553
No 2
>1w0r_A Properdin, factor P; X-RAY scattering, analytical ultracentrifugation, complement, thrombospondin type I repeats, constrained modelling; NMR {Homo sapiens} PDB: 1w0s_A
Probab=100.00 E-value=2e-37 Score=310.19 Aligned_cols=262 Identities=23% Similarity=0.471 Sum_probs=194.0
Q ss_pred CCCCCCcEEEEEEEEEEecCCCCeeeecCCCCCCCCCCCCCCCCCCCCCCCccc-cCCCcccccccCCCceEEEEEeeec
Q psy10169 74 DHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEGVDWL-TSEWTGCDHLCGDGKQKRSVKCYRE 152 (390)
Q Consensus 74 ~~~CG~G~q~r~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~~~W~-~~~Ws~CS~tCG~G~q~R~~~C~~~ 152 (390)
+.+||+|++.|. .|+... ... .+.....|+.-.+ +.|. |++|++||++||.|+|+|.|.|+..
T Consensus 17 ~~~~G~g~~~~~-~c~~~~-~~~------------~~~~~~~c~~c~~--~~ws~Ws~Ws~CS~tCG~G~q~R~r~C~~~ 80 (442)
T 1w0r_A 17 KGLLGGGVSVED-CCLNTA-FAY------------QKRSGGLCQPCRS--PRWSLWSTWAPCSVTCSEGSQLRYRRCVGW 80 (442)
T ss_pred ccccCCceEEec-ccCCCC-ccc------------cCCCcccCcCCCC--CCCCCCCCCCCccCccCCcEEEEEEEeecC
Confidence 567999999875 454321 110 1112233543333 7885 8999999999999999999999864
Q ss_pred CCCCCeeecCCCCCCCC-C----CCCccccCCCCC-cc-cce-eeccccccccccCCCcEEEEEEeeCCCCccccCCccc
Q psy10169 153 DKDGHREVVPDSACNEE-K----PESEKPCNLRPC-EG-VDW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCL 224 (390)
Q Consensus 153 ~~~g~~~~v~~~~C~~~-~----P~~~~~C~~~~C-~~-~~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~ 224 (390)
+..|.+. + +.+.+.|+..+| |. ..| .|++|++||++||.|+|+|.|.|...... .+..|.
T Consensus 81 ----------~~~C~~~~~~~~~~~~~~~C~~~~Ccp~~~~W~~W~~Ws~CS~tCG~G~q~R~r~C~~~~~~--~~~~C~ 148 (442)
T 1w0r_A 81 ----------NGQCSGKVAPGTLEWQLQACEDQQCCPEMGGWSGWGPWEPCSVTCSKGTRTRRRACNHPAPK--CGGHCP 148 (442)
T ss_pred ----------CCCCCCcccCCCCccccccccCCccCCCCCceeeCCCCCCCCCCCCCCceEEEEEeCCcCCC--CCCCCC
Confidence 2357442 2 467899999997 42 358 57999999999999999999999976432 567898
Q ss_pred CCCCCccccccC-CCCCCCC--Cccc-cCCcCCCcccCCCe----EEEEEEeecCCCCCccccCCCCCCCCCCCCccccC
Q psy10169 225 KAKTPELQRECE-SPPPCEH--QWYA-TQWSKCSAKCGTGI----QTRKVFCGALDGESIKKVDDSKCDPELKYNATKNC 296 (390)
Q Consensus 225 ~~~~p~~~~~C~-~~~~C~~--~W~~-s~Ws~CS~tCG~G~----q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C 296 (390)
+ .+.+.+.|+ . .+||. .|.. ++||+||++||.|+ |+|.|.|.+..... .+++..|.+. +.+.+.|
T Consensus 149 g--~~~~~~~C~~~-~~Cp~~~~W~~Ws~WS~CS~tCG~G~~~~~q~R~r~C~~~~~~~--~~~g~~C~g~--~~e~~~C 221 (442)
T 1w0r_A 149 G--QAQESEACDTQ-QVCPTHGAWATWGPWTPCSASCHGGPHEPKETRSRKCSAPEPSQ--KPPGKPCPGL--AYEQRRC 221 (442)
T ss_pred C--CcceecCCCCc-CccccccccceecccccCCccCCCCCccCceEEEEEecCCCcCc--cCCCcCCCCC--cceeEee
Confidence 7 578899999 6 89986 5877 99999999999999 99999999765431 2467889874 4688999
Q ss_pred CCCCCCC--CCccc-cCCcccccccCCCEEEEEecCCCCCCCCCCCcccCCcccccccccccccccccc--CC--CCCCc
Q psy10169 297 TSSQVCK--GHWMS-GPWSKCSKTYGGGTMVSRTARDEVIPVEPTGKVAEADEEEECEEEEEEGEETVN--ND--TDEWT 369 (390)
Q Consensus 297 ~~~~~Cp--~~W~~-s~Ws~CS~tCG~G~q~R~r~c~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~--~~--~~~ws 369 (390)
+...+|| +.|.. ++||+||++||.|+|+|.|.|..+.+... +. .|.+...+.+.|.. .+ .+.|+
T Consensus 222 ~~~~~Cp~~g~W~~Ws~WS~CS~tCG~G~q~R~r~C~~~~p~~g-------g~--~C~g~~~~~~~C~~~~~Cp~~g~W~ 292 (442)
T 1w0r_A 222 TGLPPCPVAGGWGPWGPVSPCPVTCGLGQTMEQRTCNHPVPQHG-------GP--FCAGDATRTHICNTAVPCPVDGEWD 292 (442)
T ss_pred cccCCcccccccccccccCCcCCccCCCceeeEEEeCCCCCCCC-------CC--CCCCCCcceeeCCCCCCCCCCCEec
Confidence 9863498 36776 99999999999999999999988765321 11 24444333323322 11 46899
Q ss_pred cccccccCCC
Q psy10169 370 VDYVWTQLNG 379 (390)
Q Consensus 370 ~ws~W~~~~~ 379 (390)
.|+.|+.|..
T Consensus 293 ~Ws~Ws~Cs~ 302 (442)
T 1w0r_A 293 SWGEWSPCIR 302 (442)
T ss_pred CCCCcCCCCC
Confidence 9999998853
No 3
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens}
Probab=99.74 E-value=4.9e-19 Score=151.82 Aligned_cols=134 Identities=21% Similarity=0.475 Sum_probs=87.0
Q ss_pred cc-ccCCCcccccccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCcc-cce-eeccccccccccCC
Q psy10169 125 DW-LTSEWTGCDHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEG-VDW-LTSEWTGCEEKCGS 201 (390)
Q Consensus 125 ~W-~~~~Ws~CS~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~-~~W-~~~~Ws~CS~sCG~ 201 (390)
.| .|++|++||++||.|+|+|.|.|..... .+....|.+.. .+.+.|+..+|+. ..| .|++|+.||++||.
T Consensus 13 ~Ws~Ws~Ws~CS~tCG~G~~~R~r~C~~~~p-----~~~g~~C~g~~-~~~~~C~~~~Cp~~~~w~~Ws~Ws~Cs~tCG~ 86 (153)
T 3r6b_A 13 GWSHWSPWSSCSVTCGDGVITRIRLCNSPSP-----QMNGKPCEGEA-RETKACKKDACPINGGWGPWSPWDICSVTCGG 86 (153)
T ss_dssp CCCCCCCCCCCSCSSSEECCEEECCSCTTCC-----CTTCCCCCSCS-EEECCEECSCCCBCCCCCCCCCCCCCSCSSSS
T ss_pred ccCCCCCCCCCCCCCCCccEEEEEEeCCCCC-----CCccccCCCcc-eeeeccccccccccCccccccccCCCCCcCCC
Confidence 56 3699999999999999999999976521 23456787643 5789999999983 346 56999999999999
Q ss_pred CcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCCCccccCCcCCCcccCCCeEEEEEEe
Q psy10169 202 SLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEHQWYATQWSKCSAKCGTGIQTRKVFC 268 (390)
Q Consensus 202 G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~~W~~s~Ws~CS~tCG~G~q~R~~~C 268 (390)
|+|+|.|.|.++... ..+..|.+ .+.+.+.|+. .+||..+....+..|++.-....+.+.+.+
T Consensus 87 G~~~R~r~C~~p~p~-~gg~~C~g--~~~e~~~C~~-~~Cp~~~~~~~~~~c~~~~~~~~~~~~~~~ 149 (153)
T 3r6b_A 87 GVQKRSRLCNNPTPQ-FGGKDCVG--DVTENQICNK-QDCPLEPYTYRVRFLAKENVTQDAEDNTVS 149 (153)
T ss_dssp EEEEEECCSCTTCCB-TTCCCCCS--CSEEEEEECC-SCCC--------------------------
T ss_pred ceEEEEEEeCCCCcc-CCCCCCCC--CCccEeeeCC-CCCcCCCCccceeEecccccccccCcceec
Confidence 999999999875433 35678977 6788899999 999988777778888776665555554443
No 4
>3r6b_A Thrombospondin-1; cell adhesion, disulfide bond, EGF-like domain, TSP-1 type 1; 2.40A {Homo sapiens}
Probab=99.73 E-value=1.5e-18 Score=148.80 Aligned_cols=129 Identities=20% Similarity=0.473 Sum_probs=87.9
Q ss_pred ce-eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC--Cccc-cCCcCCCcccCCCe
Q psy10169 186 DW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH--QWYA-TQWSKCSAKCGTGI 261 (390)
Q Consensus 186 ~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~--~W~~-s~Ws~CS~tCG~G~ 261 (390)
.| .|++|++||++||.|+|+|.|.|...... +.+..|.+ ...+.+.|+. .+||. .|.. ++|+.||++||.|+
T Consensus 13 ~Ws~Ws~Ws~CS~tCG~G~~~R~r~C~~~~p~-~~g~~C~g--~~~~~~~C~~-~~Cp~~~~w~~Ws~Ws~Cs~tCG~G~ 88 (153)
T 3r6b_A 13 GWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQ-MNGKPCEG--EARETKACKK-DACPINGGWGPWSPWDICSVTCGGGV 88 (153)
T ss_dssp CCCCCCCCCCCSCSSSEECCEEECCSCTTCCC-TTCCCCCS--CSEEECCEEC-SCCCBCCCCCCCCCCCCCSCSSSSEE
T ss_pred ccCCCCCCCCCCCCCCCccEEEEEEeCCCCCC-CccccCCC--cceeeecccc-ccccccCccccccccCCCCCcCCCce
Confidence 46 67999999999999999999999875432 36678987 5567889999 99984 4544 89999999999999
Q ss_pred EEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCccccCCcccccccCCCEEEE
Q psy10169 262 QTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCKGHWMSGPWSKCSKTYGGGTMVS 325 (390)
Q Consensus 262 q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp~~W~~s~Ws~CS~tCG~G~q~R 325 (390)
|+|.|.|.+.... .++..|.+ .+.+.+.|+.. +||..+....+..|++.-+...+.+
T Consensus 89 ~~R~r~C~~p~p~----~gg~~C~g--~~~e~~~C~~~-~Cp~~~~~~~~~~c~~~~~~~~~~~ 145 (153)
T 3r6b_A 89 QKRSRLCNNPTPQ----FGGKDCVG--DVTENQICNKQ-DCPLEPYTYRVRFLAKENVTQDAED 145 (153)
T ss_dssp EEEECCSCTTCCB----TTCCCCCS--CSEEEEEECCS-CCC----------------------
T ss_pred EEEEEEeCCCCcc----CCCCCCCC--CCccEeeeCCC-CCcCCCCccceeEecccccccccCc
Confidence 9999999865432 46788977 46789999997 7997776677888888766544444
No 5
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1
Probab=99.73 E-value=2.2e-18 Score=140.24 Aligned_cols=106 Identities=24% Similarity=0.654 Sum_probs=86.5
Q ss_pred ce-eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC--Cccc-cCCcCCCcccCCCe
Q psy10169 186 DW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH--QWYA-TQWSKCSAKCGTGI 261 (390)
Q Consensus 186 ~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~--~W~~-s~Ws~CS~tCG~G~ 261 (390)
.| .|++|++||++||.|+|+|.|.|.++... +.+..|.+ .+.+.+.|+. .+||. .|.. ++|++||++||.|+
T Consensus 4 ~ws~Ws~Ws~CS~tCG~G~~~R~R~C~~~~p~-~~g~~C~g--~~~e~~~C~~-~~Cp~~g~w~~Ws~Ws~Cs~tCG~G~ 79 (113)
T 1lsl_A 4 GWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQ-MNGKPCEG--EARETKACKK-DACPINGGWGPWSPWDICSVTCGGGV 79 (113)
T ss_dssp CCCCCCCCCCCSCSSSEEEEEEECCSCTTCCC-TTSCCCCS--CSEEEEEEEC-CCCCBCCCCCCCCCCCCCSCSSSCEE
T ss_pred ccCCCCCCCCCcCcCCCceEEEEEEeCCCCCC-CCCCcCCC--CCceeeEccc-ccccccccccCcCCccCccCcCCCCe
Confidence 45 66999999999999999999999875432 35678987 5677899999 99985 4654 99999999999999
Q ss_pred EEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCC
Q psy10169 262 QTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVC 302 (390)
Q Consensus 262 q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C 302 (390)
|+|.|.|.+.... .++..|.+ .+.+.+.|+.. +|
T Consensus 80 ~~R~r~C~~~~p~----~gg~~C~g--~~~e~~~C~~~-~C 113 (113)
T 1lsl_A 80 QKRSRLCNNPTPQ----FGGKDCVG--DVTENQICNKQ-DC 113 (113)
T ss_dssp EEEECCSCTTCCB----TTCCCCCS--CSEEEEEECCS-CC
T ss_pred EEEEEEeCCCCcc----cCCCCCCC--CCceEeccCCC-CC
Confidence 9999999875432 46788987 35688999986 56
No 6
>1lsl_A Thrombospondin 1; TSP-1, TSR, cell adhesion; HET: FUL FUC; 1.90A {Homo sapiens} SCOP: g.60.1.1 g.60.1.1
Probab=99.73 E-value=1.4e-18 Score=141.40 Aligned_cols=107 Identities=24% Similarity=0.627 Sum_probs=85.3
Q ss_pred cc-ccCCCcccccccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCcc-cce-eeccccccccccCC
Q psy10169 125 DW-LTSEWTGCDHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEG-VDW-LTSEWTGCEEKCGS 201 (390)
Q Consensus 125 ~W-~~~~Ws~CS~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~-~~W-~~~~Ws~CS~sCG~ 201 (390)
.| .|++|++||++||.|+|+|.|.|.... ..+....|.+.. .+.+.|+..+|+. ..| .|++|++||++||.
T Consensus 4 ~ws~Ws~Ws~CS~tCG~G~~~R~R~C~~~~-----p~~~g~~C~g~~-~e~~~C~~~~Cp~~g~w~~Ws~Ws~Cs~tCG~ 77 (113)
T 1lsl_A 4 GWSHWSPWSSCSVTCGDGVITRIRLCNSPS-----PQMNGKPCEGEA-RETKACKKDACPINGGWGPWSPWDICSVTCGG 77 (113)
T ss_dssp CCCCCCCCCCCSCSSSEEEEEEECCSCTTC-----CCTTSCCCCSCS-EEEEEEECCCCCBCCCCCCCCCCCCCSCSSSC
T ss_pred ccCCCCCCCCCcCcCCCceEEEEEEeCCCC-----CCCCCCcCCCCC-ceeeEcccccccccccccCcCCccCccCcCCC
Confidence 45 369999999999999999999997652 123456786643 5789999999984 347 67999999999999
Q ss_pred CcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCC
Q psy10169 202 SLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPC 241 (390)
Q Consensus 202 G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C 241 (390)
|+|+|.|.|.++... ..+..|.+ .+.+.+.|+. .+|
T Consensus 78 G~~~R~r~C~~~~p~-~gg~~C~g--~~~e~~~C~~-~~C 113 (113)
T 1lsl_A 78 GVQKRSRLCNNPTPQ-FGGKDCVG--DVTENQICNK-QDC 113 (113)
T ss_dssp EEEEEECCSCTTCCB-TTCCCCCS--CSEEEEEECC-SCC
T ss_pred CeEEEEEEeCCCCcc-cCCCCCCC--CCceEeccCC-CCC
Confidence 999999999876432 35678987 6778889998 766
No 7
>3ghm_A A disintegrin and metalloproteinase with thrombos motifs 13; thrombospondin type-1 motif, beta sandwich, hydrolase; HET: NAG FUC BGC; 2.60A {Homo sapiens} PDB: 3ghn_A* 3vn4_A*
Probab=99.30 E-value=9.8e-13 Score=128.78 Aligned_cols=72 Identities=19% Similarity=0.241 Sum_probs=61.6
Q ss_pred CCeEeecccccccc-cc-------------------------ceeccCccEEEcCCccCCCCeeEEE--CCEEEEEEeCC
Q psy10169 1 MCQTLRGVLDNNDM-QV-------------------------AIRNMSGHYYLNGNWRIDYPKPLWF--AGTVFYYERNT 52 (390)
Q Consensus 1 ~C~~v~g~f~~~~~-~~-------------------------Al~~~~g~y~lNg~~~i~~~~~~~~--aGt~~~Y~r~~ 52 (390)
+|++|+|+|++... +| |||+ +|+|||||+|+|++++.|++ |||+|+|++..
T Consensus 270 tC~~v~G~f~~~~~~gY~~v~~IP~GA~~I~I~e~~~s~n~LAl~~-~g~y~lNG~~~i~~~~~~~~~~~gt~~~Y~~~~ 348 (410)
T 3ghm_A 270 TCSPRKGSFTAGRAREYVTFLTVTPNLTSVYIANHRPLFTHLAVRI-GGRYVVAGKMSISPNTTYPSLLEDGRVEYRVAL 348 (410)
T ss_dssp SEEEEEEEECCCCBTEEEEEEEECTTCEEEEEEESCTTSEEEEEEE-TTEEEECCSSSCCCSEEESCTTCSSEEEEEEEE
T ss_pred EeeeeeeeeccCCCCcceEEEecCCCceEEEEEccCCCccEEEEec-CCeEEecCCccccCCcceeeeeCCcEEEEEecc
Confidence 69999999998652 22 9994 79999999999999999985 79999999862
Q ss_pred C----CCCcceeecCCCccceeecC
Q psy10169 53 F----YAPESISALGPTTEPLYVVC 73 (390)
Q Consensus 53 ~----~~~e~l~~~GP~~e~~~i~~ 73 (390)
. ...|.|+|.|||+|+|+|||
T Consensus 349 ~~~~~~~~E~l~a~GP~~e~l~v~v 373 (410)
T 3ghm_A 349 TEDRLPRLEEIRIWGPLQEDADIQV 373 (410)
T ss_dssp CSSSCEEEEEEEEESCCSSCEEEEE
T ss_pred cCCCCCCceEEECCCCCCCCEEEEE
Confidence 1 14699999999999999988
No 8
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.14 E-value=1.1e-11 Score=134.22 Aligned_cols=128 Identities=23% Similarity=0.453 Sum_probs=90.3
Q ss_pred eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC--Cccc-cCCcCCCcccCCCeEEE
Q psy10169 188 LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH--QWYA-TQWSKCSAKCGTGIQTR 264 (390)
Q Consensus 188 ~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~--~W~~-s~Ws~CS~tCG~G~q~R 264 (390)
.|++||+||++||.|+|+|.|.|... ....+..|...-.+.+.+.|+. .+||. .|.. ++||+||+ || |.++|
T Consensus 7 ~Ws~Ws~CS~tCG~G~q~R~R~c~~~--~~~~~~~C~~~c~~~e~~~C~~-~~Cp~~c~w~~Ws~Ws~Cs~-C~-g~~~R 81 (913)
T 3t5o_A 7 AWTQWTSCSKTCNSGTQSRHRQIVVD--KYYQENFCEQICSKQETRECNW-QRCPINCLLGDFGPWSDCDP-CI-EKQSK 81 (913)
T ss_dssp CBCCCCCCSCSSSCEEEEEEBCCCCC--HHHHHTTHHHHCCCEEEEEECC-SCCCBCCEECCCCCCCCCCS-SS-CEECC
T ss_pred CCCCCccccCCCCCeeEEEEEEEccC--CCCCCcCCCCcCcCceeeeecc-ccccccccccccCCccCCCC-cc-cccce
Confidence 56999999999999999999999863 2224456765334788999999 99984 3332 99999999 97 99999
Q ss_pred EEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCccccCCcccc--cccCCCEEEEE-ecCCCC
Q psy10169 265 KVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCKGHWMSGPWSKCS--KTYGGGTMVSR-TARDEV 332 (390)
Q Consensus 265 ~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp~~W~~s~Ws~CS--~tCG~G~q~R~-r~c~~~ 332 (390)
.|.|.... ..++..|.+. ..+.+.|+...+||..- ..|. -.|..|..... ..|...
T Consensus 82 ~R~~~~~~-----~~gg~~C~g~--~~e~~~C~~~~~Cp~~~-----~~C~~~F~C~~g~ci~~~~~c~g~ 140 (913)
T 3t5o_A 82 VRSVLRPS-----QFGGQPCTAP--LVAFQPCIPSKLCKIEE-----ADCKNKFRCDSGRCIARKLECNGE 140 (913)
T ss_dssp BCCEEECE-----ETTCCCCCSC--SBCCEECCCSSSSCCCC-----CCCSSEEECTTSCEEEGGGSSSSS
T ss_pred eeEeccCc-----cCCCCCCCCC--cccccccCCccCCCccc-----cCcccccccCCCceEccceecCCc
Confidence 99997532 2467889864 44789999733798421 1342 24555654433 355544
No 9
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.05 E-value=2e-11 Score=132.20 Aligned_cols=77 Identities=25% Similarity=0.501 Sum_probs=60.2
Q ss_pred CccccCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCC--CCccc-cCCcccccccCC
Q psy10169 244 QWYATQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCK--GHWMS-GPWSKCSKTYGG 320 (390)
Q Consensus 244 ~W~~s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp--~~W~~-s~Ws~CS~tCG~ 320 (390)
.| ++||+||++||.|+|+|.|.|.... ..++..|...-.+.+.+.|+.. +|| ..|.. ++||+||+ ||
T Consensus 7 ~W--s~Ws~CS~tCG~G~q~R~R~c~~~~-----~~~~~~C~~~c~~~e~~~C~~~-~Cp~~c~w~~Ws~Ws~Cs~-C~- 76 (913)
T 3t5o_A 7 AW--TQWTSCSKTCNSGTQSRHRQIVVDK-----YYQENFCEQICSKQETRECNWQ-RCPINCLLGDFGPWSDCDP-CI- 76 (913)
T ss_dssp CB--CCCCCCSCSSSCEEEEEEBCCCCCH-----HHHHTTHHHHCCCEEEEEECCS-CCCBCCEECCCCCCCCCCS-SS-
T ss_pred CC--CCCccccCCCCCeeEEEEEEEccCC-----CCCCcCCCCcCcCceeeeeccc-cccccccccccCCccCCCC-cc-
Confidence 56 9999999999999999999998521 1244566553336789999997 799 23333 99999999 97
Q ss_pred CEEEEEecCC
Q psy10169 321 GTMVSRTARD 330 (390)
Q Consensus 321 G~q~R~r~c~ 330 (390)
|.++|.|.|.
T Consensus 77 g~~~R~R~~~ 86 (913)
T 3t5o_A 77 EKQSKVRSVL 86 (913)
T ss_dssp CEECCBCCEE
T ss_pred cccceeeEec
Confidence 9999999774
No 10
>2bbx_A Trap, thrombospondin-related anonymous protein; elongated three-stranded structure, cell adhesion; NMR {Plasmodium falciparum}
Probab=98.76 E-value=2.1e-09 Score=73.27 Aligned_cols=45 Identities=27% Similarity=0.712 Sum_probs=37.1
Q ss_pred Ccc-ccCCCcccccccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCc
Q psy10169 124 VDW-LTSEWTGCDHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCE 183 (390)
Q Consensus 124 ~~W-~~~~Ws~CS~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~ 183 (390)
+.| .|++|++||++||.|+|+|.|.|... .|.+. +.+.||..+||
T Consensus 3 ~~w~~Ws~Ws~CS~tCG~G~~~R~r~C~~~------------~C~g~---~~~~C~~~~Cp 48 (49)
T 2bbx_A 3 ASCGVWDEWSPCSVTCGKGTRSRKREILHE------------GCTSE---IQEQCEEERCP 48 (49)
T ss_dssp CCCSCCCCCCCCSSSSSSSEEEEECCCSST------------TSCCE---EEEECCCCCCC
T ss_pred CcCCCCCCcccccCcCCCCeEEEEeeeCCC------------CCCCC---eeEeeCCCCCC
Confidence 345 35999999999999999999999753 47653 68999999997
No 11
>1vex_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus}
Probab=98.72 E-value=6.4e-09 Score=72.96 Aligned_cols=48 Identities=27% Similarity=0.567 Sum_probs=40.6
Q ss_pred eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCC
Q psy10169 188 LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCE 242 (390)
Q Consensus 188 ~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~ 242 (390)
.|++|+.||++||.|+|+|.|.|..... +..|.+ .+.+.+.|+. .+||
T Consensus 9 ~Ws~Ws~CS~tCG~G~~~R~R~C~~~~~----~~~C~g--~~~e~~~C~~-~~CP 56 (56)
T 1vex_A 9 PWSEWSDCSVTCGKGMRTRQRMLKSLAE----LGDCNE--DLEQAEKCML-PECP 56 (56)
T ss_dssp CCCCCCCCSCSSBSCEEEEECCBCCTTC----CCCCCC--CSEEEEECCB-CSCC
T ss_pred CCCCCCCcCccCCCCCEEEEEeccCCCC----CCCCCC--CCCeEeecCC-CCCc
Confidence 5599999999999999999999987542 467887 5678899998 8886
No 12
>1vex_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus}
Probab=98.61 E-value=2.5e-08 Score=69.90 Aligned_cols=48 Identities=29% Similarity=0.863 Sum_probs=39.6
Q ss_pred CccccCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy10169 244 QWYATQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCK 303 (390)
Q Consensus 244 ~W~~s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp 303 (390)
.| ++||+||++||.|+|+|.|.|.+.. +...|.+. +.+.+.|+.. +||
T Consensus 9 ~W--s~Ws~CS~tCG~G~~~R~R~C~~~~-------~~~~C~g~--~~e~~~C~~~-~CP 56 (56)
T 1vex_A 9 PW--SEWSDCSVTCGKGMRTRQRMLKSLA-------ELGDCNED--LEQAEKCMLP-ECP 56 (56)
T ss_dssp CC--CCCCCCSCSSBSCEEEEECCBCCTT-------CCCCCCCC--SEEEEECCBC-SCC
T ss_pred CC--CCCCCcCccCCCCCEEEEEeccCCC-------CCCCCCCC--CCeEeecCCC-CCc
Confidence 46 9999999999999999999998643 24678763 5688999986 686
No 13
>2bbx_A Trap, thrombospondin-related anonymous protein; elongated three-stranded structure, cell adhesion; NMR {Plasmodium falciparum}
Probab=98.58 E-value=2e-08 Score=68.28 Aligned_cols=43 Identities=26% Similarity=0.644 Sum_probs=36.4
Q ss_pred eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC
Q psy10169 188 LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH 243 (390)
Q Consensus 188 ~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~ 243 (390)
.|++||+||++||.|+|+|.|.|.+. .|.+. +.+.|+. .+||+
T Consensus 7 ~Ws~Ws~CS~tCG~G~~~R~r~C~~~--------~C~g~----~~~~C~~-~~Cpv 49 (49)
T 2bbx_A 7 VWDEWSPCSVTCGKGTRSRKREILHE--------GCTSE----IQEQCEE-ERCPP 49 (49)
T ss_dssp CCCCCCCCSSSSSSSEEEEECCCSST--------TSCCE----EEEECCC-CCCCC
T ss_pred CCCCcccccCcCCCCeEEEEeeeCCC--------CCCCC----eeEeeCC-CCCCC
Confidence 55999999999999999999999763 58762 6889999 89973
No 14
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A
Probab=98.56 E-value=1.3e-08 Score=74.41 Aligned_cols=50 Identities=26% Similarity=0.375 Sum_probs=37.6
Q ss_pred CccccCCcccccccCCCEEEEEecCCCCCCCCCCC-cccCCcccccccccccc
Q psy10169 305 HWMSGPWSKCSKTYGGGTMVSRTARDEVIPVEPTG-KVAEADEEEECEEEEEE 356 (390)
Q Consensus 305 ~W~~s~Ws~CS~tCG~G~q~R~r~c~~~~~~~~~~-~~~~~~~~~~C~~~~~~ 356 (390)
.|..|+||+||++||.|+|.|.|.|.++.|.+... .+.. |.+.|..+.|+
T Consensus 20 ~~vtS~WS~CSvTCG~Gvq~R~R~C~nP~P~~~~~~~~d~--E~e~~~~~~~~ 70 (77)
T 3vdj_A 20 NSLSTEWSPCSVTCGNGIQVRIKPGSANKPKDELDYANDI--EKKICKMEKCP 70 (77)
T ss_dssp TTCSSSCCCCSCSSSEEEEEEECGGGTTSCGGGCCHHHHE--EEEEEECSCCC
T ss_pred ccccccCCCCCCcCCCCeEEeeecCCCCCCcccCccCcch--hhhhcccccCC
Confidence 46669999999999999999999999998877543 2222 23357666665
No 15
>1szl_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus}
Probab=98.49 E-value=3.2e-08 Score=70.61 Aligned_cols=48 Identities=25% Similarity=0.540 Sum_probs=39.5
Q ss_pred cCCCcccc-cccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCcc
Q psy10169 128 TSEWTGCD-HLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEG 184 (390)
Q Consensus 128 ~~~Ws~CS-~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~ 184 (390)
|++|++|| ++||.|+|+|.|.|..+ .++ ...|.+.. +.+.|+.++||.
T Consensus 10 Ws~Ws~CS~~tCG~G~~~R~R~c~~p-~~g------g~~C~g~~--e~~~C~~~~Cp~ 58 (61)
T 1szl_A 10 WSPWSACSSSTCEKGKRMRQRMLKAQ-LDL------SVPCPDTQ--DFQPCMGPGCSD 58 (61)
T ss_dssp CCCCCCCSCSSSSCEECCEECCEEEE-SCT------TSCCCTTE--ECCEECCTTCCS
T ss_pred CCCCCCCCCccCCCCeeEEEeecccc-CCC------CCCCCCcc--ceeEeCcCCCcC
Confidence 49999999 79999999999999854 233 35787765 889999999983
No 16
>1szl_A F-spondin; TSR, cell adhesion; NMR {Rattus norvegicus}
Probab=98.36 E-value=1.4e-07 Score=67.17 Aligned_cols=49 Identities=24% Similarity=0.558 Sum_probs=39.9
Q ss_pred CccccCCcCCC-cccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCCC
Q psy10169 244 QWYATQWSKCS-AKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCKG 304 (390)
Q Consensus 244 ~W~~s~Ws~CS-~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp~ 304 (390)
.| ++||+|| ++||.|+|+|.|.|..+. .++..|.+.. +.+.|+.. +||.
T Consensus 9 ~W--s~Ws~CS~~tCG~G~~~R~R~c~~p~------~gg~~C~g~~---e~~~C~~~-~Cp~ 58 (61)
T 1szl_A 9 NW--SPWSACSSSTCEKGKRMRQRMLKAQL------DLSVPCPDTQ---DFQPCMGP-GCSD 58 (61)
T ss_dssp SC--CCCCCCSCSSSSCEECCEECCEEEES------CTTSCCCTTE---ECCEECCT-TCCS
T ss_pred CC--CCCCCCCCccCCCCeeEEEeeccccC------CCCCCCCCcc---ceeEeCcC-CCcC
Confidence 56 9999999 799999999999998422 3567898742 88999987 7984
No 17
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=98.27 E-value=1e-07 Score=93.18 Aligned_cols=66 Identities=23% Similarity=0.565 Sum_probs=0.0
Q ss_pred cc-ccCCCcccccccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCcccce-eeccccccc
Q psy10169 125 DW-LTSEWTGCDHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEGVDW-LTSEWTGCE 196 (390)
Q Consensus 125 ~W-~~~~Ws~CS~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~~~W-~~~~Ws~CS 196 (390)
.| .|++|++||++||+|+|+|.|.|..+.+. .....|.+.. .+.+.|+..+||...| .|++||+|+
T Consensus 308 ~w~~Ws~ws~Cs~tCG~G~~~r~R~C~~~~p~-----~gg~~C~g~~-~~~~~C~~~~Cp~~~~~~~~~ws~c~ 375 (378)
T 2rjq_A 308 NWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPR-----NNGRYCTGKR-AIYRSCSLMPCPPNGKSFGSAWSHPQ 375 (378)
T ss_dssp --------------------------------------------------------------------------
T ss_pred CcCCCCCCCCcCCcCCCCcEEeeeccCCCCCC-----CCCCCCCCCC-eEEeecCCCCCcCCCCCcccccCCCC
Confidence 57 37999999999999999999999875211 1234687654 5789999999996567 679999986
No 18
>3vdj_A Circumsporozoite (CS) protein; TSR, ATSR, cell invasion; 1.70A {Plasmodium falciparum} PDB: 3vdk_A 3vdl_A
Probab=98.23 E-value=1.1e-07 Score=69.48 Aligned_cols=51 Identities=22% Similarity=0.469 Sum_probs=38.0
Q ss_pred ceeeccccccccccCCCcEEEEEEeeCCCCccccCCccc-CCCCCccccccCCCCCCCC
Q psy10169 186 DWLTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCL-KAKTPELQRECESPPPCEH 243 (390)
Q Consensus 186 ~W~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~-~~~~p~~~~~C~~~~~C~~ 243 (390)
.|.+++||+||++||.|+|.|.|.|.++.+.. .+. . ...+++.|.+ ..||.
T Consensus 20 ~~vtS~WS~CSvTCG~Gvq~R~R~C~nP~P~~----~~~~~--~d~E~e~~~~-~~~~~ 71 (77)
T 3vdj_A 20 NSLSTEWSPCSVTCGNGIQVRIKPGSANKPKD----ELDYA--NDIEKKICKM-EKCPH 71 (77)
T ss_dssp TTCSSSCCCCSCSSSEEEEEEECGGGTTSCGG----GCCHH--HHEEEEEEEC-SCCCC
T ss_pred ccccccCCCCCCcCCCCeEEeeecCCCCCCcc----cCccC--cchhhhhccc-ccCCc
Confidence 47889999999999999999999999865421 121 1 2245677887 77874
No 19
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=98.07 E-value=4.9e-07 Score=88.31 Aligned_cols=66 Identities=20% Similarity=0.541 Sum_probs=0.0
Q ss_pred cce-eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC-Cccc-cCCcCCC
Q psy10169 185 VDW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH-QWYA-TQWSKCS 254 (390)
Q Consensus 185 ~~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~-~W~~-s~Ws~CS 254 (390)
..| .|++|++||++||.|++.|.|.|..+.+. ..+..|.+ ...+.+.|+. .+||. .|.. ++||+|+
T Consensus 307 g~w~~Ws~ws~Cs~tCG~G~~~r~R~C~~~~p~-~gg~~C~g--~~~~~~~C~~-~~Cp~~~~~~~~~ws~c~ 375 (378)
T 2rjq_A 307 GNWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPR-NNGRYCTG--KRAIYRSCSL-MPCPPNGKSFGSAWSHPQ 375 (378)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CCcCCCCCCCCcCCcCCCCcEEeeeccCCCCCC-CCCCCCCC--CCeEEeecCC-CCCcCCCCCcccccCCCC
Confidence 357 77999999999999999999999875432 24567987 4567889999 99984 4543 8999986
No 20
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=97.82 E-value=2.7e-06 Score=79.38 Aligned_cols=42 Identities=29% Similarity=0.718 Sum_probs=0.0
Q ss_pred cCCCcccccccCCCceEEEEEeeecCCCCCeeecCCCCCCCCCCCCccccCCCCCcc
Q psy10169 128 TSEWTGCDHLCGDGKQKRSVKCYREDKDGHREVVPDSACNEEKPESEKPCNLRPCEG 184 (390)
Q Consensus 128 ~~~Ws~CS~tCG~G~q~R~~~C~~~~~~g~~~~v~~~~C~~~~P~~~~~C~~~~C~~ 184 (390)
|++|++||++||.|+|+|.|.|... .|.+. +.+.|+..+||.
T Consensus 222 w~~ws~Cs~~cg~g~~~r~r~c~~~------------~c~~~---~~~~C~~~~Cp~ 263 (281)
T 4hqf_A 222 WDEWSPCSVTCGKGTRSRKREILHE------------GCTSE---LQEQCEEERCLP 263 (281)
T ss_dssp ---------------------------------------------------------
T ss_pred CCCCCccccccCCCcceEEEecCCC------------CCCCC---eeeeeCCCCCcC
Confidence 4999999999999999999999753 47664 678999999984
No 21
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=97.61 E-value=8.2e-06 Score=76.13 Aligned_cols=45 Identities=27% Similarity=0.607 Sum_probs=0.0
Q ss_pred eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCCCc
Q psy10169 188 LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEHQW 245 (390)
Q Consensus 188 ~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~~W 245 (390)
.|++||+||++||.|+|+|.|.|.++ .|.+. +.+.|+. .+||...
T Consensus 221 ~w~~ws~Cs~~cg~g~~~r~r~c~~~--------~c~~~----~~~~C~~-~~Cp~~~ 265 (281)
T 4hqf_A 221 VWDEWSPCSVTCGKGTRSRKREILHE--------GCTSE----LQEQCEE-ERCLPKR 265 (281)
T ss_dssp ----------------------------------------------------------
T ss_pred CCCCCCccccccCCCcceEEEecCCC--------CCCCC----eeeeeCC-CCCcCCC
Confidence 44999999999999999999999863 48762 6789999 8998644
No 22
>3ghm_A A disintegrin and metalloproteinase with thrombos motifs 13; thrombospondin type-1 motif, beta sandwich, hydrolase; HET: NAG FUC BGC; 2.60A {Homo sapiens} PDB: 3ghn_A* 3vn4_A*
Probab=97.61 E-value=1.8e-05 Score=77.43 Aligned_cols=53 Identities=21% Similarity=0.548 Sum_probs=44.2
Q ss_pred ce-eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCC
Q psy10169 186 DW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCE 242 (390)
Q Consensus 186 ~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~ 242 (390)
.| .|++||.||++||.|++.|.|.|.++.+. ..+..|.+ ...+.+.|+. .+||
T Consensus 102 ~Ws~Ws~WS~CS~tCG~G~~~R~R~C~~p~P~-~GG~~C~G--~~~~~~~Cn~-~~Cp 155 (410)
T 3ghm_A 102 RWSSWGPRSPCSRSCGGGVVTRRRQCNNPRPA-FGGRACVG--ADLQAEMCNT-QACE 155 (410)
T ss_dssp CCCCCCCCCCCSCSSSCEEEECCCCSCTTCCB-SSCCCCCS--CSCCEEEECC-SCCS
T ss_pred CCCCCCCCCcccCCCCCCcccceeccCCCCcC-CCCCCCCC--CCeeeEeCCC-cccC
Confidence 57 77999999999999999999999976533 25678988 5667889999 8997
No 23
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.65 E-value=0.0011 Score=67.58 Aligned_cols=90 Identities=23% Similarity=0.484 Sum_probs=48.9
Q ss_pred ccccCCCCCcccceeeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCCCccc-cCCcC
Q psy10169 174 EKPCNLRPCEGVDWLTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEHQWYA-TQWSK 252 (390)
Q Consensus 174 ~~~C~~~~C~~~~W~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~~W~~-s~Ws~ 252 (390)
...|+-.||+...-.|.+|++|+..|+.|. .+..|..... +.|.. ...|.. ++||.
T Consensus 464 ~~~c~c~pC~~~g~~~~~gt~C~c~C~~G~---------------~G~~C~~~~~----~~~pv----dG~Ws~Ws~Ws~ 520 (554)
T 3ojy_A 464 FNACRCGPCFNNGVPILEGTSCRCQCRLGS---------------LGAACEQTQT----EGAKA----DGSWSCWSSWSV 520 (554)
T ss_dssp TCGGGSCCCTTTCCEEEETTEEEECCCSSC---------------CSSSCC----------CCC----CCCCCCCCCCBC
T ss_pred cccccccccCCCCEEcCCCCcccccCCCCC---------------CCCCcccCcc----cCCCC----CCCcccCCCCCC
Confidence 445776799842213589999999998881 2345755221 22322 135643 88888
Q ss_pred CCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccC
Q psy10169 253 CSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNC 296 (390)
Q Consensus 253 CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C 296 (390)
|| .|+++|.|.|.++... .++..|.+. ..+.+.|
T Consensus 521 Cs----~G~~~R~R~C~~P~P~----~gG~~C~G~--~~e~~~C 554 (554)
T 3ojy_A 521 CR----AGIQERRRECDNPAPQ----NGGASCPGR--KVQTQAC 554 (554)
T ss_dssp CS----SSCCEEECCC--------------CCCSC--SEEEC--
T ss_pred CC----CCCceeeeecCCCCCC----CCCCCCCCC--CcccCCC
Confidence 87 6899999999875432 567889874 3355544
No 24
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.43 E-value=0.0016 Score=66.34 Aligned_cols=74 Identities=23% Similarity=0.554 Sum_probs=43.4
Q ss_pred ccccCCCCCCCCCccc-cCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCCCCccc-c
Q psy10169 232 QRECESPPPCEHQWYA-TQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCKGHWMS-G 309 (390)
Q Consensus 232 ~~~C~~~~~C~~~W~~-s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp~~W~~-s 309 (390)
...|+- .+|+..... .+|++|+..|+.|. .+..|.... .+.|... +.|.. +
T Consensus 464 ~~~c~c-~pC~~~g~~~~~gt~C~c~C~~G~------------------~G~~C~~~~----~~~~pvd----G~Ws~Ws 516 (554)
T 3ojy_A 464 FNACRC-GPCFNNGVPILEGTSCRCQCRLGS------------------LGAACEQTQ----TEGAKAD----GSWSCWS 516 (554)
T ss_dssp TCGGGS-CCCTTTCCEEEETTEEEECCCSSC------------------CSSSCC----------CCCC----CCCCCCC
T ss_pred cccccc-cccCCCCEEcCCCCcccccCCCCC------------------CCCCcccCc----ccCCCCC----CCcccCC
Confidence 345766 689865444 89999999998881 234465432 1234332 46755 7
Q ss_pred CCcccccccCCCEEEEEecCCCCCCCC
Q psy10169 310 PWSKCSKTYGGGTMVSRTARDEVIPVE 336 (390)
Q Consensus 310 ~Ws~CS~tCG~G~q~R~r~c~~~~~~~ 336 (390)
+||.|| .|+|.|.|.|.++.|.+
T Consensus 517 ~Ws~Cs----~G~~~R~R~C~~P~P~~ 539 (554)
T 3ojy_A 517 SWSVCR----AGIQERRRECDNPAPQN 539 (554)
T ss_dssp CCBCCS----SSCCEEECCC-------
T ss_pred CCCCCC----CCCceeeeecCCCCCCC
Confidence 888887 68999999999887654
No 25
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=96.02 E-value=0.0016 Score=59.89 Aligned_cols=26 Identities=35% Similarity=0.724 Sum_probs=24.1
Q ss_pred CccccCCcccccccCCCEEEEEecCCCC
Q psy10169 305 HWMSGPWSKCSKTYGGGTMVSRTARDEV 332 (390)
Q Consensus 305 ~W~~s~Ws~CS~tCG~G~q~R~r~c~~~ 332 (390)
.| ++||.||++||.|++.|+|.|..+
T Consensus 218 ~w--~~~s~c~~~cg~g~~~r~r~~~~~ 243 (266)
T 4hqo_A 218 PW--DPWTACSVTCGRGTHSRSRPSLHE 243 (266)
T ss_dssp CC--CCCCCCSSSSEEEEEEEECCCSST
T ss_pred Cc--CCCCccccccCCCceeeeEeeCCC
Confidence 57 899999999999999999999875
No 26
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=95.98 E-value=0.0015 Score=60.21 Aligned_cols=45 Identities=27% Similarity=0.647 Sum_probs=33.7
Q ss_pred ce-eeccccccccccCCCcEEEEEEeeCCCCccccCCcccCCCCCccccccCCCCCCCC
Q psy10169 186 DW-LTSEWTGCEEKCGSSLETRTAVCATKNGKIYPESFCLKAKTPELQRECESPPPCEH 243 (390)
Q Consensus 186 ~W-~~~~Ws~CS~sCG~G~~~R~v~C~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~C~~ 243 (390)
.| .|++|+.||++||.|+++|.|.|.++ .|.+ ..+.+|.. ..||.
T Consensus 215 ~~~~w~~~s~c~~~cg~g~~~r~r~~~~~--------~~~~----~~~~~~~~-~~~~~ 260 (266)
T 4hqo_A 215 NCGPWDPWTACSVTCGRGTHSRSRPSLHE--------KCTT----HMVSECEE-GECPH 260 (266)
T ss_dssp ECCCCCCCCCCSSSSEEEEEEEECCCSST--------TCCC----EEEEEEEE-SCCCC
T ss_pred cccCcCCCCccccccCCCceeeeEeeCCC--------CCCC----CcCccccc-CCCCc
Confidence 45 56999999999999999999999864 2543 23455666 66664
No 27
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=92.20 E-value=0.062 Score=54.46 Aligned_cols=45 Identities=27% Similarity=0.589 Sum_probs=27.7
Q ss_pred CCccc-cCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCC
Q psy10169 243 HQWYA-TQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCT 297 (390)
Q Consensus 243 ~~W~~-s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~ 297 (390)
..|.. ++||+|| .|+++|.|.|.++... .++..|.+. ..+.+.|+
T Consensus 492 G~Ws~Ws~Ws~Cs----~G~~~R~R~C~~p~P~----~gG~~C~G~--~~~~~~C~ 537 (537)
T 3ojy_B 492 GKWNCWSNWSSCS----GRRKTRQRQCNNPPPQ----NGGSPCSGP--ASETLDCS 537 (537)
T ss_dssp CCCCCCCCCCCSS----SEEEECCTTTTCCSSC----C-----CCC--SEEEECC-
T ss_pred CCCCCCCCCCCcC----CCceecccccCCCCCC----CCCCcCCCC--CcceecCc
Confidence 35644 8888998 6899999999875433 567889874 34666663
No 28
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=90.53 E-value=0.16 Score=51.47 Aligned_cols=49 Identities=16% Similarity=0.620 Sum_probs=34.5
Q ss_pred CccccCCcCCCcccCCCeEEEEEEeecCCCCCccccCCCCCCCCCCCCccccCCCCCCCC
Q psy10169 244 QWYATQWSKCSAKCGTGIQTRKVFCGALDGESIKKVDDSKCDPELKYNATKNCTSSQVCK 303 (390)
Q Consensus 244 ~W~~s~Ws~CS~tCG~G~q~R~~~C~~~~~~~~~~~~~~~C~~~~~p~~~~~C~~~~~Cp 303 (390)
.| ++||+|+ +|+ |.|.|.|....+. +.++..|... ..+.+.|....+|+
T Consensus 15 ~w--s~Ws~C~-~C~-~~~~R~R~v~~p~-----q~gG~~C~~~--l~d~~~C~~~~~C~ 63 (537)
T 3ojy_B 15 SW--SSWTTCD-PCQ-KKRYRYAYLLQPS-----QFHGEPCNFS--DKEVEDCVTNRPCR 63 (537)
T ss_dssp CC--CCCCCCB-TTT-TEEEEECCEEECE-----ETTCCCCCSC--SEEEEECCCCCCCC
T ss_pred CC--CCCCCCC-CCC-CceEeeeeecccc-----ccCCCcCccc--hhhhccCCCccccc
Confidence 67 9999999 597 6788988876532 2467888753 34677886644674
No 29
>1mkc_A Protein (midkine); heparin-binding growth factor; NMR {Synthetic} SCOP: g.5.1.2
Probab=32.34 E-value=36 Score=21.61 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=15.7
Q ss_pred cccCCCcccccccCCCceEEEEEee
Q psy10169 126 WLTSEWTGCDHLCGDGKQKRSVKCY 150 (390)
Q Consensus 126 W~~~~Ws~CS~tCG~G~q~R~~~C~ 150 (390)
+..+.|++|.+. .|+++|...-.
T Consensus 3 Y~~~~W~eCD~~--T~~ktRt~tLK 25 (43)
T 1mkc_A 3 YKFENWGACDGG--TGTKVRQGTLK 25 (43)
T ss_dssp CEECCCCSSCSS--SSSCCCCEECC
T ss_pred ccccccccccCC--CCeEEeeeeee
Confidence 345999999753 46777775543
Done!