RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy10170
(366 letters)
>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 63
Score = 74.2 bits (182), Expect = 1e-17
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 180 PDSNKTDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 239
P N + C P++ G C R+ +++ +SC QF YGGC+GN NNF + AC + C
Sbjct: 1 PTGNNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACW 60
Score = 70.7 bits (173), Expect = 2e-16
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 301 PRDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 356
+ C P++ G C R+ +++ +SC QF YGGC+GN NNF + AC + C
Sbjct: 5 NAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACW 60
Score = 64.9 bits (158), Expect = 3e-14
Identities = 27/58 (46%), Positives = 29/58 (50%)
Query: 241 PGRTRVICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
G IC LP D G C RYYYD Q+C F+Y GC GN N F T E C C
Sbjct: 2 TGNNAEICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 59
>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 56
Score = 71.4 bits (175), Expect = 9e-17
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 302 RDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
R+ C + E G C RW F+ C F+YGGC GN NNF +E C+ C
Sbjct: 2 REVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 70.6 bits (173), Expect = 2e-16
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 186 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
+ C + E G C RW F+ C F+YGGC GN NNF +E C+ C
Sbjct: 3 EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
Score = 64.9 bits (158), Expect = 2e-14
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
+C + G C R+Y+D C PF Y GCGGN N F T E C+ C
Sbjct: 4 VCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 55
>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis
angusticeps) [TaxId: 8618]}
Length = 59
Score = 71.4 bits (175), Expect = 1e-16
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 300 PPRDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 356
P R C G C P + +N++ K CE+F + GC GN N F++ C C+
Sbjct: 2 PRRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
Score = 69.9 bits (171), Expect = 4e-16
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 184 KTDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 239
+ C G C P + +N++ K CE+F + GC GN N F++ C C+
Sbjct: 3 RRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCI 58
Score = 64.1 bits (156), Expect = 5e-14
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
+C L + G C + +YY+++++ C F ++GCGGN NRF T EEC C
Sbjct: 6 LCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC 57
>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3
chain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 70.7 bits (173), Expect = 2e-16
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 184 KTDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
+TD C+ P + G C +W ++ KSC +F+YGGC GN N F S+ C + C
Sbjct: 1 ETDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
Score = 69.1 bits (169), Expect = 6e-16
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 303 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
D C+ P + G C +W ++ KSC +F+YGGC GN N F S+ C + C
Sbjct: 3 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 55
Score = 66.4 bits (162), Expect = 6e-15
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYCSP 300
IC+LP D G C ++ ++YYD ++C F Y GCGGN N+F + +EC C+P
Sbjct: 4 ICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAP 57
>d1bf0a_ g.8.1.1 (A:) Calcicludine (cac) {Green mamba (Dendroaspis
angusticeps) [TaxId: 8618]}
Length = 60
Score = 69.1 bits (169), Expect = 6e-16
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 301 PRDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 356
P C++P+ G C + + F AK C F + GC GN N FQ+ C +KCL
Sbjct: 3 PPWYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58
Score = 68.4 bits (167), Expect = 1e-15
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 186 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 239
C++P+ G C + + F AK C F + GC GN N FQ+ C +KCL
Sbjct: 5 WYCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKCL 58
Score = 63.7 bits (155), Expect = 6e-14
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C+ P G C + +Y+ + C+PF+++GCGGN NRF T EC C
Sbjct: 6 YCKEPVRIGSCKKQFSSFYFKWTAKKCLPFLFSGCGGNANRFQTIGECRKKC 57
>d1dtka_ g.8.1.1 (A:) Dendrotoxin K {Black mamba (Dendroaspis
polylepis polylepis) [TaxId: 8620]}
Length = 57
Score = 69.1 bits (169), Expect = 7e-16
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 188 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 239
C+ P+ G C P + + +AK C F Y GC GN N F++ C C+
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56
Score = 69.1 bits (169), Expect = 7e-16
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 305 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 356
C+ P+ G C P + + +AK C F Y GC GN N F++ C C+
Sbjct: 5 CKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTCV 56
Score = 64.1 bits (156), Expect = 4e-14
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C+LP G C +YY + + C+PF Y+GCGGN NRF T EEC C
Sbjct: 4 YCKLPLRIGPCKRKIPSFYYKWKAKQCLPFDYSGCGGNANRFKTIEECRRTC 55
>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor
complex {Human (Homo sapiens) [TaxId: 9606]}
Length = 56
Score = 68.7 bits (168), Expect = 8e-16
Identities = 25/51 (49%), Positives = 27/51 (52%)
Query: 188 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
C PI RG C WAF+ C F YGGC+GNGN F SE C E C
Sbjct: 4 CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54
Score = 68.7 bits (168), Expect = 8e-16
Identities = 25/51 (49%), Positives = 27/51 (52%)
Query: 305 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
C PI RG C WAF+ C F YGGC+GNGN F SE C E C
Sbjct: 4 CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54
Score = 64.1 bits (156), Expect = 4e-14
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C LP G C + + + +D + CV F Y GC GN N+F + +EC YC
Sbjct: 3 ACNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECREYC 54
>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos
taurus) [TaxId: 9913]}
Length = 58
Score = 68.7 bits (168), Expect = 9e-16
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 186 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
D C +P G C R+ +N +A C+ F YGGC+ NNF+S CL C
Sbjct: 3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 68.7 bits (168), Expect = 9e-16
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 303 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
D C +P G C R+ +N +A C+ F YGGC+ NNF+S CL C
Sbjct: 3 DFCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
Score = 62.9 bits (153), Expect = 1e-13
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C P G C RY+Y+ + C F+Y GC N F ++E+CL C
Sbjct: 4 FCLEPPYAGACRARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCLRTC 55
>d1tfxc_ g.8.1.1 (C:) Tissue factor pathway inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 68.7 bits (168), Expect = 1e-15
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 186 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
D C + G C G R+ +N + K CE+F YGGC GN NNF++ C C
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
Score = 68.7 bits (168), Expect = 1e-15
Identities = 22/53 (41%), Positives = 29/53 (54%)
Query: 303 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
D C + G C G R+ +N + K CE+F YGGC GN NNF++ C C
Sbjct: 3 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
Score = 62.6 bits (152), Expect = 2e-13
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C L D G+C Y RY+Y+ + + C F Y GC GN+N F T EEC + C
Sbjct: 4 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 55
>d1jc6a_ g.8.1.1 (A:) Venom basic protease inhibitor IX (VIIIb)
{Banded krait (Bungarus fasciatus) [TaxId: 8613]}
Length = 65
Score = 68.7 bits (168), Expect = 1e-15
Identities = 21/56 (37%), Positives = 28/56 (50%)
Query: 183 NKTDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
N+ C E G CN P + +N C++F YGGC GN NNF++ C C
Sbjct: 2 NRPTFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
Score = 68.0 bits (166), Expect = 2e-15
Identities = 20/53 (37%), Positives = 26/53 (49%)
Query: 303 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
C E G CN P + +N C++F YGGC GN NNF++ C C
Sbjct: 5 TFCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTC 57
Score = 63.7 bits (155), Expect = 7e-14
Identities = 20/54 (37%), Positives = 26/54 (48%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYCSP 300
C L + G C+ +YY+ C F Y GCGGN N F T +EC C+
Sbjct: 6 FCNLLPETGRCNALIPAFYYNSHLHKCQKFNYGGCGGNANNFKTIDECQRTCAA 59
>d1irha_ g.8.1.1 (A:) Tissue factor pathway inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 61
Score = 68.3 bits (167), Expect = 1e-15
Identities = 22/55 (40%), Positives = 26/55 (47%)
Query: 301 PRDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
C P +RG C N R+ +N C F Y GC GN NNF S+ CL C
Sbjct: 4 GPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
Score = 67.9 bits (166), Expect = 2e-15
Identities = 22/53 (41%), Positives = 26/53 (49%)
Query: 186 DPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
C P +RG C N R+ +N C F Y GC GN NNF S+ CL C
Sbjct: 6 SWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
Score = 62.9 bits (153), Expect = 1e-13
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C P D G+C R+YY+ C PF Y+GCGGN N FT+ +ECL C
Sbjct: 7 WCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQECLRAC 58
>d1bunb_ g.8.1.1 (B:) beta2-bungarotoxin, neurotoxin chain
{Many-banded krait (Bungarus multicinctus) [TaxId:
8616]}
Length = 61
Score = 68.0 bits (166), Expect = 2e-15
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 183 NKTDPCEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 239
+ C++P + C + + AK C QF YGGC GNGN+F+S+ C +CL
Sbjct: 2 KRHPDCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58
Score = 68.0 bits (166), Expect = 2e-15
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 305 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKCL 356
C++P + C + + AK C QF YGGC GNGN+F+S+ C +CL
Sbjct: 7 CDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCECL 58
Score = 63.0 bits (153), Expect = 1e-13
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C P D +C + +YY + CV F Y GC GN N F + C C
Sbjct: 6 DCDKPPDTKICQTVVRAFYYKPSAKRCVQFRYGGCNGNGNHFKSDHLCRCEC 57
>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla
helianthus) [TaxId: 6123]}
Length = 55
Score = 67.2 bits (164), Expect = 3e-15
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 188 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
C +P + G C G +PR+ F+ E C F YGGC GNGNNF++ C C
Sbjct: 3 CSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 67.2 bits (164), Expect = 3e-15
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 305 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
C +P + G C G +PR+ F+ E C F YGGC GNGNNF++ C C
Sbjct: 3 CSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
Score = 63.7 bits (155), Expect = 5e-14
Identities = 24/52 (46%), Positives = 27/52 (51%)
Query: 247 ICRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
IC P G C Y R+Y+D C PFIY GCGGN N F T +C C
Sbjct: 2 ICSEPKKVGRCKGYFPRFYFDSETGKCTPFIYGGCGGNGNNFETLHQCRAIC 53
>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor
complex {Human (Homo sapiens) [TaxId: 9606]}
Length = 54
Score = 66.8 bits (163), Expect = 5e-15
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 188 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 238
C+ G C G R+ +N + +CE F YGGC GNGNNF +E CL+ C
Sbjct: 2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52
Score = 66.8 bits (163), Expect = 5e-15
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 305 CEQPIERGDCNGNYPRWAFNKEAKSCEQFYYGGCKGNGNNFQSESACLEKC 355
C+ G C G R+ +N + +CE F YGGC GNGNNF +E CL+ C
Sbjct: 2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52
Score = 61.4 bits (149), Expect = 4e-13
Identities = 21/51 (41%), Positives = 25/51 (49%)
Query: 248 CRLPGDGGMCSEYHKRYYYDERRQTCVPFIYTGCGGNLNRFTTSEECLHYC 298
C+L G C RY+Y+ C F Y GC GN N F T +ECL C
Sbjct: 2 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 52
>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,
phenylalanine-repressible {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 462
Score = 29.1 bits (65), Expect = 0.96
Identities = 16/83 (19%), Positives = 22/83 (26%), Gaps = 11/83 (13%)
Query: 140 DCAATQFGCCPDGTAATKKTLEDCAGIDLKNCS---VSAWGCC-----PDSNKTDPCEQP 191
DCA T + L A + S V P S D
Sbjct: 86 DCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADIDALGLR 145
Query: 192 IERGDCNGNYPRWAFNKEAKSCE 214
RGD +A + A+ +
Sbjct: 146 SYRGD---MINGFAPDAAAREHD 165
>d1u1qa_ d.58.7.1 (A:) Nuclear ribonucleoprotein A1 (RNP A1, UP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 25.3 bits (54), Expect = 8.8
Identities = 12/116 (10%), Positives = 26/116 (22%), Gaps = 6/116 (5%)
Query: 208 KEAKSCEQFYYGGCKGNGNNFQSESACLEKCLHPGRTRVICRLPGDGGMCSEYHKRYYYD 267
+ +G G + ++ ++ +V R+ S +
Sbjct: 34 TDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGA 93
Query: 268 ERRQTCVPFIYTGCGGNLNRFTTSEECLHYCSPPRDPCEQPIERGDCNGNYPRWAF 323
+ G + T Y I +G +AF
Sbjct: 94 HLTVKKIFV------GGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAF 143
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.136 0.467
Gapped
Lambda K H
0.267 0.0411 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,496,575
Number of extensions: 78057
Number of successful extensions: 301
Number of sequences better than 10.0: 1
Number of HSP's gapped: 257
Number of HSP's successfully gapped: 79
Length of query: 366
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 279
Effective length of database: 1,213,086
Effective search space: 338450994
Effective search space used: 338450994
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)