Query psy10173
Match_columns 456
No_of_seqs 324 out of 1519
Neff 4.3
Searched_HMMs 46136
Date Fri Aug 16 19:40:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10173.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10173hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd00109 KU BPTI/Kunitz family 99.4 1.7E-13 3.7E-18 104.1 5.5 54 342-396 1-54 (54)
2 smart00131 KU BPTI/Kunitz fami 99.4 2.2E-13 4.9E-18 103.0 5.7 53 342-395 1-53 (53)
3 PF00014 Kunitz_BPTI: Kunitz/B 99.4 2E-13 4.2E-18 102.2 5.1 53 343-396 1-53 (53)
4 KOG4295|consensus 99.2 1.5E-11 3.3E-16 119.5 8.1 60 339-399 74-136 (295)
5 KOG4295|consensus 98.6 3.6E-08 7.8E-13 96.0 4.4 73 372-450 2-125 (295)
6 smart00131 KU BPTI/Kunitz fami 98.4 2E-07 4.3E-12 70.5 3.7 39 406-450 8-46 (53)
7 cd00109 KU BPTI/Kunitz family 98.4 2.6E-07 5.6E-12 70.1 3.7 39 406-450 8-46 (54)
8 PF00014 Kunitz_BPTI: Kunitz/B 98.4 4.8E-07 1E-11 67.6 4.1 38 406-449 7-44 (53)
9 KOG4597|consensus 98.1 4.6E-06 9.9E-11 88.6 5.3 92 341-447 312-410 (560)
10 KOG4597|consensus 97.7 1.4E-05 3.1E-10 84.9 2.4 89 290-399 336-424 (560)
11 KOG3540|consensus 89.9 0.14 3.1E-06 55.4 1.4 59 339-398 105-163 (615)
12 PF06933 SSP160: Special lobe- 77.2 2.9 6.2E-05 45.1 4.2 20 149-168 735-754 (756)
No 1
>cd00109 KU BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.
Probab=99.43 E-value=1.7e-13 Score=104.06 Aligned_cols=54 Identities=44% Similarity=1.109 Sum_probs=51.6
Q ss_pred CCCCCCCCCCCCCCCeeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhcccC
Q psy10173 342 KACSLPKDNGPCRDFTVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVCV 396 (456)
Q Consensus 342 ~~C~LP~d~G~C~~~~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C~ 396 (456)
++|.+|++.|.|....+||||| +.+++|+.|+|+||++|.|+|.|+++|++.|.
T Consensus 1 ~~C~~~~~~g~C~~~~~~~~yd-~~~~~C~~f~~~gc~~~~N~F~s~~~C~~~C~ 54 (54)
T cd00109 1 DVCSLPPDTGPCKAYIPRYYYD-ATTKQCEPFTYGGCGGNANNFATKEECERTCG 54 (54)
T ss_pred CcccCCCCCCCCCCCccEEEEe-CCCCccceeECCCccCCccCcCCHHHHHhhcc
Confidence 4799999999999999999999 99999999999999999999999999999985
No 2
>smart00131 KU BPTI/Kunitz family of serine protease inhibitors. Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein.
Probab=99.42 E-value=2.2e-13 Score=103.01 Aligned_cols=53 Identities=47% Similarity=1.101 Sum_probs=50.9
Q ss_pred CCCCCCCCCCCCCCCeeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhccc
Q psy10173 342 KACSLPKDNGPCRDFTVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVC 395 (456)
Q Consensus 342 ~~C~LP~d~G~C~~~~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C 395 (456)
.+|.+|++.|.|.....||||| +.+++|++|+|.||.+|.|+|.++++|++.|
T Consensus 1 ~~C~~~~~~g~c~~~~~~w~yd-~~~~~C~~f~~~gc~~n~N~F~t~~~C~~~C 53 (53)
T smart00131 1 DVCLLPPDTGPCGGSIPRYYYD-PETGTCEPFTYGGCGGNANNFESLEECERTC 53 (53)
T ss_pred CcccCCCCCCCCCCCeeEEEEe-CCCCccceeECCCccCCCCCcCCHHHHHhhC
Confidence 3799999999999999999999 9999999999999999999999999999987
No 3
>PF00014 Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhibitor domain; InterPro: IPR002223 The majority of the sequences having this domain belong to the MEROPS inhibitor family I2, clan IB; the Kunitz/bovine pancreatic trypsin inhibitor family, they inhibit proteases of the S1 family [] and are restricted to the metazoa with a single exception: Amsacta moorei entomopoxvirus. They are short (~50 residue) alpha/beta proteins with few secondary structures. The fold is constrained by 3 disulphide bonds. The type example for this family is aprotinin (bovine pancreatic trypsin inhibitor) [] (or basic protease inhibitor), but the family includes numerous other members [, , , ], such as snake venom basic protease; mammalian inter-alpha-trypsin inhibitors; trypstatin, a rodent mast cell inhibitor of trypsin; a domain found in an alternatively-spliced form of Alzheimer's amyloid beta-protein; domains at the C-termini of the alpha(1) and alpha(3) chains of type VII and type VI collagens; and tissue factor pathway inhibitor precursor.; GO: 0004867 serine-type endopeptidase inhibitor activity; PDB: 1YC0_I 4DTG_K 1TFX_D 1ADZ_A 1BF0_A 3OFW_A 1SHP_A 3M7Q_B 3GYM_J 1BHC_G ....
Probab=99.42 E-value=2e-13 Score=102.20 Aligned_cols=53 Identities=47% Similarity=1.251 Sum_probs=50.9
Q ss_pred CCCCCCCCCCCCCCeeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhcccC
Q psy10173 343 ACSLPKDNGPCRDFTVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVCV 396 (456)
Q Consensus 343 ~C~LP~d~G~C~~~~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C~ 396 (456)
+|.+|++.|.|.....||||| ..+++|++|+|.||++|.|+|.|+++|++.|+
T Consensus 1 ~C~~p~~~g~C~~~~~~w~yn-~~~~~C~~f~~~~c~~~~N~F~t~~~C~~~C~ 53 (53)
T PF00014_consen 1 VCLLPPDEGPCSGNEPRWYYN-PSTGRCEQFWYGGCGGNENNFPTEEECQKTCG 53 (53)
T ss_dssp GGGSTCTCTSSSSCEEEEEEE-TTTTEEEEEEECSSSSSSSCBSSHHHHHHHHT
T ss_pred CCCCCCcCCCCCCCccEEEEe-CCCCcEEEeEccccCCCCcCCCCHHHHHHHcC
Confidence 589999999999999999999 99999999999999999999999999999985
No 4
>KOG4295|consensus
Probab=99.24 E-value=1.5e-11 Score=119.50 Aligned_cols=60 Identities=37% Similarity=0.809 Sum_probs=55.5
Q ss_pred CCCCCCCCCCCCCCCC---CCeeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhcccCCCC
Q psy10173 339 GPQKACSLPKDNGPCR---DFTVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVCVEPS 399 (456)
Q Consensus 339 ~~~~~C~LP~d~G~C~---~~~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C~~~~ 399 (456)
....+|.+|.+.|.|. .++.||||| ..+++|.+|+|+||+||.|||.++++|+..|....
T Consensus 74 ~~~~~C~~~~~~g~~~~~~~~~~r~~~d-~~t~~C~~F~y~GC~gN~N~F~s~~~C~~~C~~~~ 136 (295)
T KOG4295|consen 74 TKNEICDQPKDVGLCCCCGTGSPRYYFD-PKTKTCQPFIYGGCGGNSNNFLSSEECERACGSAD 136 (295)
T ss_pred CCCcccCCchhhcccccCCCceeeeEEc-CCCCeEeeeeecCcCCCcCcccCHHHHHHHhcCCC
Confidence 4467899999999877 799999999 99999999999999999999999999999998654
No 5
>KOG4295|consensus
Probab=98.59 E-value=3.6e-08 Score=96.04 Aligned_cols=73 Identities=25% Similarity=0.357 Sum_probs=59.7
Q ss_pred EEeeccccCCCCcccChHHHhcccCCCCC---------------------------------------------Ccccc-
Q psy10173 372 RFWYGGCEGNGNRFKSQEECRAVCVEPSG---------------------------------------------KETST- 405 (456)
Q Consensus 372 ~F~YgGCgGN~NnF~T~eeC~~~C~~~~~---------------------------------------------k~~C~- 405 (456)
.|.|.||.+|.|+|.+.++|+..|..... ..+|.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 81 (295)
T KOG4295|consen 2 SFKYNGCPGNSNNFFSSEDCQVRCCVGGPCGGSTSLLLAGNSSPVSSKDPMCPSTYLCVTVLLVSSCLSCCPTKNEICDQ 81 (295)
T ss_pred CccccCCCCCccceeehhhhceeeccccCCCcchHHHHhcCcceeeccCCCCcccceeeeehhccccccccCCCCcccCC
Confidence 47789999999999999999988864431 12344
Q ss_pred --ccccCC---CCCceEEecCCCCcccccccceEEEecCCCCCCCCCccc
Q psy10173 406 --ILLTCD---SIMNAVILDDLAVLVPKHLRDRIAVYITRNGNVRSNSKH 450 (456)
Q Consensus 406 --~~G~C~---~~~~RwYYD~tt~tC~~~~~C~~F~Y~GCgGN~Nrfsk~ 450 (456)
+.|.|. ....|||||+.+++| .+|+|.||+||.|||.-.
T Consensus 82 ~~~~g~~~~~~~~~~r~~~d~~t~~C------~~F~y~GC~gN~N~F~s~ 125 (295)
T KOG4295|consen 82 PKDVGLCCCCGTGSPRYYFDPKTKTC------QPFIYGGCGGNSNNFLSS 125 (295)
T ss_pred chhhcccccCCCceeeeEEcCCCCeE------eeeeecCcCCCcCcccCH
Confidence 456666 788999999999998 999999999999999754
No 6
>smart00131 KU BPTI/Kunitz family of serine protease inhibitors. Serine protease inhibitors. One member of the family is encoded by an alternatively-spliced form of Alzheimer's amyloid beta-protein.
Probab=98.43 E-value=2e-07 Score=70.55 Aligned_cols=39 Identities=13% Similarity=0.003 Sum_probs=35.7
Q ss_pred ccccCCCCCceEEecCCCCcccccccceEEEecCCCCCCCCCccc
Q psy10173 406 ILLTCDSIMNAVILDDLAVLVPKHLRDRIAVYITRNGNVRSNSKH 450 (456)
Q Consensus 406 ~~G~C~~~~~RwYYD~tt~tC~~~~~C~~F~Y~GCgGN~Nrfsk~ 450 (456)
+.|.|.....|||||+.+++| ++|.|.||+||.|+|..+
T Consensus 8 ~~g~c~~~~~~w~yd~~~~~C------~~f~~~gc~~n~N~F~t~ 46 (53)
T smart00131 8 DTGPCGGSIPRYYYDPETGTC------EPFTYGGCGGNANNFESL 46 (53)
T ss_pred CCCCCCCCeeEEEEeCCCCcc------ceeECCCccCCCCCcCCH
Confidence 567899999999999999998 999999999999999764
No 7
>cd00109 KU BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.
Probab=98.40 E-value=2.6e-07 Score=70.15 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=35.3
Q ss_pred ccccCCCCCceEEecCCCCcccccccceEEEecCCCCCCCCCccc
Q psy10173 406 ILLTCDSIMNAVILDDLAVLVPKHLRDRIAVYITRNGNVRSNSKH 450 (456)
Q Consensus 406 ~~G~C~~~~~RwYYD~tt~tC~~~~~C~~F~Y~GCgGN~Nrfsk~ 450 (456)
+.|.|.....|||||++++.| +.|.|.||+||.|+|...
T Consensus 8 ~~g~C~~~~~~~~yd~~~~~C------~~f~~~gc~~~~N~F~s~ 46 (54)
T cd00109 8 DTGPCKAYIPRYYYDATTKQC------EPFTYGGCGGNANNFATK 46 (54)
T ss_pred CCCCCCCCccEEEEeCCCCcc------ceeECCCccCCccCcCCH
Confidence 567899999999999999998 999999999999999753
No 8
>PF00014 Kunitz_BPTI: Kunitz/Bovine pancreatic trypsin inhibitor domain; InterPro: IPR002223 The majority of the sequences having this domain belong to the MEROPS inhibitor family I2, clan IB; the Kunitz/bovine pancreatic trypsin inhibitor family, they inhibit proteases of the S1 family [] and are restricted to the metazoa with a single exception: Amsacta moorei entomopoxvirus. They are short (~50 residue) alpha/beta proteins with few secondary structures. The fold is constrained by 3 disulphide bonds. The type example for this family is aprotinin (bovine pancreatic trypsin inhibitor) [] (or basic protease inhibitor), but the family includes numerous other members [, , , ], such as snake venom basic protease; mammalian inter-alpha-trypsin inhibitors; trypstatin, a rodent mast cell inhibitor of trypsin; a domain found in an alternatively-spliced form of Alzheimer's amyloid beta-protein; domains at the C-termini of the alpha(1) and alpha(3) chains of type VII and type VI collagens; and tissue factor pathway inhibitor precursor.; GO: 0004867 serine-type endopeptidase inhibitor activity; PDB: 1YC0_I 4DTG_K 1TFX_D 1ADZ_A 1BF0_A 3OFW_A 1SHP_A 3M7Q_B 3GYM_J 1BHC_G ....
Probab=98.35 E-value=4.8e-07 Score=67.61 Aligned_cols=38 Identities=11% Similarity=-0.107 Sum_probs=34.9
Q ss_pred ccccCCCCCceEEecCCCCcccccccceEEEecCCCCCCCCCcc
Q psy10173 406 ILLTCDSIMNAVILDDLAVLVPKHLRDRIAVYITRNGNVRSNSK 449 (456)
Q Consensus 406 ~~G~C~~~~~RwYYD~tt~tC~~~~~C~~F~Y~GCgGN~Nrfsk 449 (456)
+.|.|.....|||||+.+++| ++|.|.||++|.|+|.-
T Consensus 7 ~~g~C~~~~~~w~yn~~~~~C------~~f~~~~c~~~~N~F~t 44 (53)
T PF00014_consen 7 DEGPCSGNEPRWYYNPSTGRC------EQFWYGGCGGNENNFPT 44 (53)
T ss_dssp TCTSSSSCEEEEEEETTTTEE------EEEEECSSSSSSSCBSS
T ss_pred cCCCCCCCccEEEEeCCCCcE------EEeEccccCCCCcCCCC
Confidence 567899888999999999998 99999999999999964
No 9
>KOG4597|consensus
Probab=98.05 E-value=4.6e-06 Score=88.56 Aligned_cols=92 Identities=21% Similarity=0.398 Sum_probs=76.3
Q ss_pred CCCCCCCCCCCCCCCC----eeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhcccCCCCCCcccc---ccccCCCC
Q psy10173 341 QKACSLPKDNGPCRDF----TVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVCVEPSGKETST---ILLTCDSI 413 (456)
Q Consensus 341 ~~~C~LP~d~G~C~~~----~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C~~~~~k~~C~---~~G~C~~~ 413 (456)
...|+- .+.|+|.+. ..+|.|| ..-+.|..|....|.||.++|.+++.|+..|... ....|. ..|+| ..
T Consensus 312 ~~e~~~-cdmgpC~g~~f~tew~~~~~-aqcg~~~~~rsv~C~~s~~~~~p~E~C~~a~~sg-~~pad~~pc~~GPC-~~ 387 (560)
T KOG4597|consen 312 PAECLT-CDMGPCTGLTFVTEWSWHLD-AQCGDCETTRSVVCKGSQGRFEPLEACLVACASG-PRPADTRPCAQGPC-PC 387 (560)
T ss_pred chhhcC-CCCcccCCccchhhhhhhcc-cccCCceeeeeeeecCccccccchhhhhhhccCC-CCCccccccccCCC-CC
Confidence 445555 778899853 2568899 9999999999999999999999999999999421 245566 78999 88
Q ss_pred CceEEecCCCCcccccccceEEEecCCCCCCCCC
Q psy10173 414 MNAVILDDLAVLVPKHLRDRIAVYITRNGNVRSN 447 (456)
Q Consensus 414 ~~RwYYD~tt~tC~~~~~C~~F~Y~GCgGN~Nrf 447 (456)
.+||||++-+ +| -++|+||.|+|
T Consensus 388 e~rW~~s~ws-qC----------s~eCg~g~~~r 410 (560)
T KOG4597|consen 388 EPRWAYSPWS-QC----------SGECGGGGNNR 410 (560)
T ss_pred ccceeecchh-hh----------ccccCCCCcce
Confidence 8999999988 78 29999999987
No 10
>KOG4597|consensus
Probab=97.73 E-value=1.4e-05 Score=84.88 Aligned_cols=89 Identities=20% Similarity=0.402 Sum_probs=78.7
Q ss_pred CcCcccceeecCCCCccccccccccccCccccCCCCCccccccccCCCCCCCCCCCCCCCCCCCCCCeeeEEEeccCCCC
Q psy10173 290 STTETSTVASSTAESTLISSTAASSTTLITTESTMESTTGGKSIESLGPGPQKACSLPKDNGPCRDFTVKWFYDGVDYGG 369 (456)
Q Consensus 290 cn~~t~~C~~F~YggC~~~~~~~~~~~dggn~N~F~T~e~C~~tC~~~~~~~~~C~LP~d~G~C~~~~~RWYYD~~~tg~ 369 (456)
|+.+-+.|+.|....| .++.+.|.++++|...|. ......|.+|-..|+| .+.+||||+ +.. +
T Consensus 336 ~~aqcg~~~~~rsv~C------------~~s~~~~~p~E~C~~a~~--sg~~pad~~pc~~GPC-~~e~rW~~s-~ws-q 398 (560)
T KOG4597|consen 336 LDAQCGDCETTRSVVC------------KGSQGRFEPLEACLVACA--SGPRPADTRPCAQGPC-PCEPRWAYS-PWS-Q 398 (560)
T ss_pred cccccCCceeeeeeee------------cCccccccchhhhhhhcc--CCCCCccccccccCCC-CCccceeec-chh-h
Confidence 6788889999999999 467899999999999883 2345679999999999 888999999 888 9
Q ss_pred eeEEeeccccCCCCcccChHHHhcccCCCC
Q psy10173 370 CNRFWYGGCEGNGNRFKSQEECRAVCVEPS 399 (456)
Q Consensus 370 C~~F~YgGCgGN~NnF~T~eeC~~~C~~~~ 399 (456)
|. ++|+||.|||.....|+..|.-.+
T Consensus 399 Cs----~eCg~g~~~r~vica~~~a~~f~v 424 (560)
T KOG4597|consen 399 CS----GECGGGGNNREVICACEQACPFEV 424 (560)
T ss_pred hc----cccCCCCcceeEEEeeecCCCccc
Confidence 98 899999999999999999998665
No 11
>KOG3540|consensus
Probab=89.90 E-value=0.14 Score=55.39 Aligned_cols=59 Identities=17% Similarity=0.113 Sum_probs=53.4
Q ss_pred CCCCCCCCCCCCCCCCCCeeeEEEeccCCCCeeEEeeccccCCCCcccChHHHhcccCCC
Q psy10173 339 GPQKACSLPKDNGPCRDFTVKWFYDGVDYGGCNRFWYGGCEGNGNRFKSQEECRAVCVEP 398 (456)
Q Consensus 339 ~~~~~C~LP~d~G~C~~~~~RWYYD~~~tg~C~~F~YgGCgGN~NnF~T~eeC~~~C~~~ 398 (456)
.+-..|..+..++.|....++|-|+ ..-.+|.-|.+++|.++.|+|....+|+++|...
T Consensus 105 spck~~~h~Vrp~~Cl~gefvseal-lvp~kC~ffh~ermD~cEn~~hwh~ea~etC~tk 163 (615)
T KOG3540|consen 105 SPCKFCLHPVRPYRCLAGEFVSEAL-LVPEKCQFFHQERMDQCENNQHWHKEAMETCSTK 163 (615)
T ss_pred CcccccCcccccceeecCcchhhhc-cCcccchhhhccccccccchHHHHHHHHHHhccC
Confidence 3445677778889999999999999 9999999999999999999999999999999865
No 12
>PF06933 SSP160: Special lobe-specific silk protein SSP160; InterPro: IPR009701 This family consists of several special lobe-specific silk protein SSP160 sequences which appear to be specific to Chironomus (Midge) species.
Probab=77.16 E-value=2.9 Score=45.14 Aligned_cols=20 Identities=30% Similarity=0.463 Sum_probs=11.3
Q ss_pred CccccCCCccccCCCCCCCC
Q psy10173 149 EFGCCFDGITAAKGPFSAAL 168 (456)
Q Consensus 149 ~~GCCpDg~T~A~Gp~~~GC 168 (456)
.-||||.|+|.-.|-.+.||
T Consensus 735 sagccpsgktlntglggrgc 754 (756)
T PF06933_consen 735 SAGCCPSGKTLNTGLGGRGC 754 (756)
T ss_pred ccCcCCCCCccccCCCcCCC
Confidence 44556666555555555555
Done!