BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10177
(116 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156553084|ref|XP_001600131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Nasonia
vitripennis]
Length = 134
Score = 180 bits (456), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/116 (73%), Positives = 105/116 (90%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENVVL+GE+D
Sbjct: 19 MVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
K+KE L +VSV+DIL+AQR+EQE+KQ++ R + K LK+RGLS++PDL +DD+F
Sbjct: 79 KDKEKNLPLSEVSVDDILDAQRREQELKQDQERRMNKALKDRGLSYIPDLGHDDMF 134
>gi|66529526|ref|XP_624639.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Apis
mellifera]
gi|340709308|ref|XP_003393252.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Bombus
terrestris]
gi|350425090|ref|XP_003494008.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Bombus
impatiens]
gi|380023316|ref|XP_003695469.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Apis
florea]
Length = 134
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 106/116 (91%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 MVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
++KE L +VSV+DIL+AQR+EQE+KQ++ R++ K LKERGLS++PD+ +DD+F
Sbjct: 79 RDKERDLPLTEVSVDDILDAQRREQELKQDQKRLINKTLKERGLSYIPDMGHDDMF 134
>gi|383861132|ref|XP_003706040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Megachile
rotundata]
Length = 134
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 106/116 (91%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 MVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
++KE L +VSV+DIL+AQR+EQE+KQ++ R++ K LKERGLS++PD+ +DD+F
Sbjct: 79 RDKEKDLPLTEVSVDDILDAQRREQELKQDQKRLINKALKERGLSYIPDMGHDDMF 134
>gi|307212313|gb|EFN88119.1| U6 snRNA-associated Sm-like protein LSm1 [Harpegnathos saltator]
Length = 134
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/116 (74%), Positives = 104/116 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 MVLLRDGRTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
EKE L QV+V+DIL+AQR+EQE+KQ++ R+ K LKERGLS++PDL +DD+F
Sbjct: 79 LEKEKVLPLTQVTVDDILDAQRREQELKQDQKRLRNKALKERGLSYMPDLNHDDMF 134
>gi|357609556|gb|EHJ66513.1| LSM1-like protein [Danaus plexippus]
Length = 138
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 102/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGREYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
KEKE L +VSV+DIL+AQR+EQ+ K E+ ++L+K LK+RGL+ + DL +DD+F
Sbjct: 83 KEKEENLPLTEVSVDDILDAQRREQDTKTEQQKLLSKALKDRGLNLIADLGHDDMF 138
>gi|389609539|dbj|BAM18381.1| Sm protein G, putative [Papilio xuthus]
Length = 138
Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/116 (72%), Positives = 102/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
K+KE L +VSV+DIL+AQR+EQ+ K E+ ++L+K LKERGL+ + DL +DD+F
Sbjct: 83 KDKEDNLPLTEVSVDDILDAQRREQDAKIEQQKLLSKALKERGLNLLADLGHDDMF 138
>gi|157136994|ref|XP_001656966.1| Sm protein G, putative [Aedes aegypti]
gi|108884233|gb|EAT48458.1| AAEL000478-PA [Aedes aegypti]
Length = 160
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 102/115 (88%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+D
Sbjct: 46 MVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEID 105
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE+ L+++SV+DIL+AQR+EQE KQE+ R+++K LKERGL+ +L D+
Sbjct: 106 REKENNLPLKEISVDDILDAQRREQEAKQEKHRLISKALKERGLNMNSELTQDEF 160
>gi|307172327|gb|EFN63815.1| U6 snRNA-associated Sm-like protein LSm1 [Camponotus floridanus]
Length = 138
Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 101/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
EKE L++V+V++IL+AQR+EQE KQE+ + + K LKERG S++PDL +DD++
Sbjct: 83 IEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRMNKALKERGFSYIPDLSHDDMY 138
>gi|148298867|ref|NP_001091827.1| LSM1-like protein [Bombyx mori]
gi|95102704|gb|ABF51290.1| LSM1-like protein [Bombyx mori]
Length = 138
Score = 171 bits (432), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 102/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
K+KE L +VSV++IL+AQR+EQ+ K ++ ++L+K LKERGL+ + DL +DD+F
Sbjct: 83 KDKEENLPLTEVSVDEILDAQRREQDAKIDQQKLLSKALKERGLNLLADLGHDDMF 138
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 171 bits (432), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/116 (70%), Positives = 98/116 (84%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG +YGDI RG+FI+RGEN+VL+GE+D
Sbjct: 24 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIVRGENMVLLGEID 83
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE L +VSV+DIL+AQR+EQE KQE ++L K LK+RG+ F DL DD+F
Sbjct: 84 VDKEKDLPLDEVSVDDILDAQRREQEAKQEHYKLLTKALKDRGVQFASDLTQDDIF 139
>gi|170047804|ref|XP_001851399.1| CaSm [Culex quinquefasciatus]
gi|167870086|gb|EDS33469.1| CaSm [Culex quinquefasciatus]
Length = 134
Score = 170 bits (430), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 102/115 (88%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+D
Sbjct: 20 MVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEID 79
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE+ L+++SV+DIL+AQR+EQE +QE+ R+++K LKERGL+ +L D+
Sbjct: 80 REKENNLPLKEISVDDILDAQRREQEARQEKHRLISKALKERGLNVNSELTQDEF 134
>gi|322779353|gb|EFZ09609.1| hypothetical protein SINV_06406 [Solenopsis invicta]
Length = 138
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 101/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
EKE L++V+V++IL+AQR+EQE KQE+ + + K LKERG +++PDL +DD++
Sbjct: 83 IEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRINKALKERGFAYIPDLSHDDMY 138
>gi|332018346|gb|EGI58951.1| U6 snRNA-associated Sm-like protein LSm1 [Acromyrmex echinatior]
Length = 138
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 101/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+D
Sbjct: 23 MVLLRDGRTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
EKE L++V+V++IL+AQR+EQE KQE+ + + K LKERG +++PDL +DD++
Sbjct: 83 IEKEKVLPLKKVTVDEILDAQRREQESKQEQKKRINKALKERGFAYIPDLSHDDMY 138
>gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster]
Length = 137
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 102/115 (88%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV++IL+AQR+EQE QE+ R+++K LKERGL+ ++IN+D
Sbjct: 82 REKEQKLPLKEISVDEILDAQRREQEQWQEKHRLVSKALKERGLAVDANIINEDF 136
>gi|312380092|gb|EFR26184.1| hypothetical protein AND_26313 [Anopheles darlingi]
Length = 134
Score = 167 bits (423), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/115 (69%), Positives = 100/115 (86%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLL DGRTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+D
Sbjct: 20 MVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEID 79
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV+DIL+AQR+EQE +QE+ R++AK LKERGL+ ++ D+
Sbjct: 80 REKESNLPLREISVDDILDAQRREQEARQEKHRLVAKALKERGLNMNSEMAQDEF 134
>gi|118794287|ref|XP_321407.3| AGAP001686-PA [Anopheles gambiae str. PEST]
gi|116116223|gb|EAA00900.3| AGAP001686-PA [Anopheles gambiae str. PEST]
Length = 134
Score = 165 bits (418), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 99/115 (86%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLL DGRTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+ IIRGENVVL+GE+D
Sbjct: 20 MVLLHDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVLLGEID 79
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV+DIL+AQR+EQE +QE+ R++AK LKERGL+ ++ D+
Sbjct: 80 REKESTLPLREISVDDILDAQRREQEARQEKHRLVAKALKERGLNMNSEMAQDEF 134
>gi|327284091|ref|XP_003226772.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Anolis
carolinensis]
Length = 133
Score = 159 bits (401), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 91/106 (85%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ KQE ++ A+ LKERGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEIQRVEQQTKQESEKLKAQALKERGLSI 124
>gi|427786347|gb|JAA58625.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 135
Score = 157 bits (397), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 93/113 (82%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG QYGDIPRGIF+IRG+NVVL+GE+D+
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDE 81
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
+KE L++VSVEDIL QR E + KQE R AK +K+RGL + ++ +DD
Sbjct: 82 DKEKDADLEEVSVEDILEVQRIEADAKQELERQRAKAMKDRGLHYHQEITHDD 134
>gi|321477585|gb|EFX88543.1| hypothetical protein DAPPUDRAFT_304575 [Daphnia pulex]
Length = 137
Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLRSVDQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENV L+GE+D
Sbjct: 21 IVVLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVALLGEID 80
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL-SFVPDLINDDLF 116
EKE L+QV VE+IL AQR EQ+ KQ + ++ KRLKE GL S V D +DD F
Sbjct: 81 LEKEERIPLKQVGVEEILEAQRLEQDEKQAKEKIRLKRLKELGLQSTVADYTHDDAF 137
>gi|350539892|ref|NP_001232304.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128059|gb|ACH44557.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128060|gb|ACH44558.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128061|gb|ACH44559.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/108 (71%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
EKE LQQVS+E+IL QR EQ+ KQE ++ + LKERGLS VP
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLS-VP 125
>gi|126303350|ref|XP_001372820.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Monodelphis domestica]
gi|395507426|ref|XP_003758025.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Sarcophilus
harrisii]
Length = 133
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 90/106 (84%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ KQE ++ + LKERGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTKQEAEKLKVQALKERGLSI 124
>gi|346471247|gb|AEO35468.1| hypothetical protein [Amblyomma maculatum]
Length = 135
Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 93/113 (82%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG QYGDIPRGIF+IRG+NVVL+GE+D+
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGKQYGDIPRGIFVIRGDNVVLLGEIDE 81
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
EKE L++VSVEDIL QR E + KQE + AK +K+RGL + ++ +DD
Sbjct: 82 EKEKDVDLEEVSVEDILEVQRIEADAKQELEKQRAKAMKDRGLHYHVEITHDD 134
>gi|241999432|ref|XP_002434359.1| clathrin heavy chain, putative [Ixodes scapularis]
gi|215497689|gb|EEC07183.1| clathrin heavy chain, putative [Ixodes scapularis]
Length = 459
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/109 (69%), Positives = 88/109 (80%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGRTLIGYLRS+DQFANLVLHKTIERIHV QYGDIPRGIF++RG+NVVL+GE+D+
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDE 81
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDL 110
KE L++VSVE IL QR E E KQ++ R AK LKERGL + DL
Sbjct: 82 AKERDVDLEEVSVEQILEVQRLEAEAKQDQERQRAKALKERGLHYHLDL 130
>gi|125811580|ref|XP_001361929.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|195170162|ref|XP_002025882.1| GL10169 [Drosophila persimilis]
gi|54637105|gb|EAL26508.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|194110746|gb|EDW32789.1| GL10169 [Drosophila persimilis]
Length = 137
Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/115 (72%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGNQYGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV++IL+AQR+EQE +QE+ R+++K LKERGL+ +LIN+D
Sbjct: 82 REKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVNAELINEDF 136
>gi|194754723|ref|XP_001959644.1| GF12971 [Drosophila ananassae]
gi|195123083|ref|XP_002006039.1| GI18766 [Drosophila mojavensis]
gi|190620942|gb|EDV36466.1| GF12971 [Drosophila ananassae]
gi|193911107|gb|EDW09974.1| GI18766 [Drosophila mojavensis]
Length = 137
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV++IL+AQR+EQE +QE+ R+++K LKERGL+ D+IN+D
Sbjct: 82 REKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVNADIINEDF 136
>gi|195382173|ref|XP_002049805.1| GJ21790 [Drosophila virilis]
gi|194144602|gb|EDW60998.1| GJ21790 [Drosophila virilis]
Length = 137
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGNQYGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
++KE L+++SV++IL+AQR+EQE +QE+ R+++K LKERGL+ D+IN+D
Sbjct: 82 RDKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVNADIINEDF 136
>gi|91093274|ref|XP_971370.1| PREDICTED: similar to LSM1-like protein [Tribolium castaneum]
gi|270016827|gb|EFA13273.1| hypothetical protein TcasGA2_TC001544 [Tribolium castaneum]
Length = 136
Score = 154 bits (389), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/116 (71%), Positives = 101/116 (87%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVLH TIERIHVG +YGDIPRG+FI+RGENVVL+GE+D
Sbjct: 21 MVLLRDGRTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIPRGVFIVRGENVVLLGEID 80
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
EKE L +VSV++IL+AQR+EQE KQE+ ++++K LKERGL + DL +DD+F
Sbjct: 81 AEKEAELPLTEVSVDEILDAQRQEQESKQEQQKLVSKALKERGLHLMADLTHDDMF 136
>gi|195025615|ref|XP_001986091.1| GH21171 [Drosophila grimshawi]
gi|193902091|gb|EDW00958.1| GH21171 [Drosophila grimshawi]
Length = 137
Score = 154 bits (388), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 102/115 (88%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV+ IL+AQR+EQE +QE+ R+++K LKERGL+ D+IN+D
Sbjct: 82 REKEQKLPLKEISVDAILDAQRREQEQRQEKHRLVSKALKERGLAVNADIINEDF 136
>gi|197128062|gb|ACH44560.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 154 bits (388), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 90/106 (84%), Gaps = 1/106 (0%)
Query: 3 LLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKE 62
LLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D E
Sbjct: 21 LLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLE 80
Query: 63 KEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
KE LQQVS+E+IL QR EQ+ KQE ++ + LKERGLS VP
Sbjct: 81 KERDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKERGLS-VP 125
>gi|442751753|gb|JAA68036.1| Putative u6 snrna-associated sm-like protein lsm1 [Ixodes ricinus]
Length = 145
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 91/113 (80%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGRTLIGYLRS+DQFANLVLHKTIERIHV QYGDIPRGIF++RG+NVVL+GE+D+
Sbjct: 32 VFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDE 91
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
KE L++VSVE IL QR E E KQ++ R AK LKERGL + D+ +DD
Sbjct: 92 AKERDVDLEEVSVEQILEVQRLEAEAKQDQERQRAKALKERGLHYHLDVSHDD 144
>gi|194881822|ref|XP_001975020.1| GG20797 [Drosophila erecta]
gi|190658207|gb|EDV55420.1| GG20797 [Drosophila erecta]
Length = 137
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/115 (71%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L++VSV++IL+AQR+EQE +QE+ R+++K LKERGL+ ++IN+D
Sbjct: 82 REKEQKLPLKEVSVDEILDAQRREQEQRQEKHRLVSKALKERGLAVDANIINEDF 136
>gi|24656769|ref|NP_611559.1| LSm1 [Drosophila melanogaster]
gi|195346337|ref|XP_002039722.1| GM15742 [Drosophila sechellia]
gi|195486602|ref|XP_002091574.1| GE13737 [Drosophila yakuba]
gi|195585326|ref|XP_002082440.1| GD25220 [Drosophila simulans]
gi|7291257|gb|AAF46688.1| LSm1 [Drosophila melanogaster]
gi|66770707|gb|AAY54665.1| IP04848p [Drosophila melanogaster]
gi|194135071|gb|EDW56587.1| GM15742 [Drosophila sechellia]
gi|194177675|gb|EDW91286.1| GE13737 [Drosophila yakuba]
gi|194194449|gb|EDX08025.1| GD25220 [Drosophila simulans]
gi|220951410|gb|ACL88248.1| CG4279-PA [synthetic construct]
Length = 137
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+EKE L+++SV++IL+AQR+EQE +QE+ R+++K LKERGL+ ++IN+D
Sbjct: 82 REKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVDANIINEDF 136
>gi|195429567|ref|XP_002062829.1| GK19486 [Drosophila willistoni]
gi|194158914|gb|EDW73815.1| GK19486 [Drosophila willistoni]
Length = 137
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/115 (70%), Positives = 103/115 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 22 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
++KE L+++SV++IL+AQR+EQE +QE+ R+++K LKERGL+ +LIN+D
Sbjct: 82 RDKEQKLPLKEISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVNAELINEDF 136
>gi|226372840|gb|ACO52045.1| U6 snRNA-associated Sm-like protein LSm1 [Rana catesbeiana]
Length = 133
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/106 (69%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE L QVS+E+IL QR EQ+ KQE ++ + LKERGLS
Sbjct: 79 LEKESDTPLLQVSIEEILEEQRVEQQSKQEAEKVKVQALKERGLSI 124
>gi|148227316|ref|NP_001090109.1| uncharacterized protein LOC735185 [Xenopus laevis]
gi|76779739|gb|AAI06458.1| MGC131170 protein [Xenopus laevis]
Length = 133
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE+ L QVS+E+IL QR EQ+ K E ++ + LKERGLS
Sbjct: 79 LEKENDTPLHQVSIEEILEDQRVEQQSKNEAEKLKVQALKERGLSI 124
>gi|148886747|ref|NP_001092164.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|146327499|gb|AAI41744.1| LOC100049754 protein [Xenopus laevis]
Length = 133
Score = 151 bits (382), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 88/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE L QVS+E+IL QR EQ+ K E ++ + LKERGLS
Sbjct: 79 LEKESDTPLHQVSIEEILEDQRIEQQSKNEAEKLKVQALKERGLSI 124
>gi|363742099|ref|XP_424387.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gallus gallus]
Length = 133
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
EKE LQQVS+E+IL QR E + KQE ++ + LKERGL+ VP
Sbjct: 79 LEKESDTLLQQVSIEEILEEQRVELQAKQESEKLKVQALKERGLA-VP 125
>gi|254281302|ref|NP_001156840.1| LSM1 homolog, U6 small nuclear RNA associated [Acyrthosiphon pisum]
Length = 135
Score = 151 bits (381), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 93/116 (80%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIGYLRSVDQ+ANL+L +T+ERIHVG ++GDIPRG+F++RGENVVL+GE+D
Sbjct: 20 MVLLRDGRTLIGYLRSVDQYANLLLQQTVERIHVGKKFGDIPRGVFLVRGENVVLLGEID 79
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
KE ++VS+ DIL Q++EQ+ K E+++ + + LK RG+ F PDL+ DD
Sbjct: 80 ALKEADQMFERVSIGDILALQKQEQDAKIEKAKSIERSLKRRGMRFPPDLVQDDFL 135
>gi|432099963|gb|ELK28857.1| U6 snRNA-associated Sm-like protein LSm1 [Myotis davidii]
Length = 133
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 91/108 (84%), Gaps = 1/108 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS VP
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTKLENEKLKVQALKDRGLS-VP 125
>gi|62988318|ref|NP_001017952.1| U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
gi|296222011|ref|XP_002757005.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Callithrix
jacchus]
gi|75057871|sp|Q5E9Z8.1|LSM1_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|59857841|gb|AAX08755.1| Lsm1 protein [Bos taurus]
gi|59857907|gb|AAX08788.1| Lsm1 protein [Bos taurus]
gi|59857923|gb|AAX08796.1| Lsm1 protein [Bos taurus]
gi|296472336|tpg|DAA14451.1| TPA: U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
Length = 133
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLSI 124
>gi|7657313|ref|NP_055277.1| U6 snRNA-associated Sm-like protein LSm1 [Homo sapiens]
gi|114619705|ref|XP_001170479.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|291409096|ref|XP_002720830.1| PREDICTED: Lsm1 protein [Oryctolagus cuniculus]
gi|301763723|ref|XP_002917277.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Ailuropoda melanoleuca]
gi|332240911|ref|XP_003269631.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nomascus
leucogenys]
gi|344281630|ref|XP_003412581.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Loxodonta
africana]
gi|345781536|ref|XP_532806.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Canis lupus
familiaris]
gi|348554227|ref|XP_003462927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cavia
porcellus]
gi|395847347|ref|XP_003796340.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Otolemur
garnettii]
gi|397521395|ref|XP_003830782.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan paniscus]
gi|402878015|ref|XP_003902702.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Papio anubis]
gi|410956402|ref|XP_003984831.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Felis catus]
gi|426256398|ref|XP_004021827.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Ovis aries]
gi|426359374|ref|XP_004046951.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|20177943|sp|O15116.1|LSM1_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm1; AltName:
Full=Cancer-associated Sm-like; AltName: Full=Small
nuclear ribonuclear CaSm
gi|2232057|gb|AAB62189.1| CaSm [Homo sapiens]
gi|5262854|emb|CAB45865.1| Lsm1 protein [Homo sapiens]
gi|12804683|gb|AAH01767.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|119583736|gb|EAW63332.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|189053287|dbj|BAG35093.1| unnamed protein product [Homo sapiens]
gi|261859266|dbj|BAI46155.1| U6 snRNA-associated Sm-like protein LSm1 [synthetic construct]
gi|351699797|gb|EHB02716.1| U6 snRNA-associated Sm-like protein LSm1 [Heterocephalus glaber]
gi|355697873|gb|EHH28421.1| Cancer-associated Sm-like protein [Macaca mulatta]
gi|355779633|gb|EHH64109.1| Cancer-associated Sm-like protein [Macaca fascicularis]
gi|380811796|gb|AFE77773.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|383412789|gb|AFH29608.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|384943820|gb|AFI35515.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|410210930|gb|JAA02684.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410252368|gb|JAA14151.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410293390|gb|JAA25295.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410336323|gb|JAA37108.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|431902255|gb|ELK08756.1| U6 snRNA-associated Sm-like protein LSm1 [Pteropus alecto]
Length = 133
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLSI 124
>gi|58332084|ref|NP_001011191.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|56268999|gb|AAH87559.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 133
Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 88/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE L QVS+E+IL QR EQ+ K E ++ + LKERGLS
Sbjct: 79 LEKESDTPLLQVSIEEILEDQRVEQQSKNEAEKLKVQALKERGLSI 124
>gi|440897037|gb|ELR48810.1| U6 snRNA-associated Sm-like protein LSm1, partial [Bos grunniens
mutus]
Length = 118
Score = 150 bits (379), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 4 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 63
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS
Sbjct: 64 LEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLSI 109
>gi|417408540|gb|JAA50816.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 195
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/105 (68%), Positives = 89/105 (84%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 81 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 140
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS 105
EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS
Sbjct: 141 LEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLS 185
>gi|326932811|ref|XP_003212506.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Meleagris
gallopavo]
Length = 133
Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/108 (68%), Positives = 90/108 (83%), Gaps = 1/108 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
EKE LQQVS+E+IL QR E + KQE ++ + LKERGL VP
Sbjct: 79 LEKESDTLLQQVSIEEILEEQRVELQAKQESEKLKVQALKERGL-VVP 125
>gi|149742575|ref|XP_001493258.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Equus
caballus]
Length = 133
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ + E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTRLEAEKLKVQALKDRGLSL 124
>gi|354472085|ref|XP_003498271.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Cricetulus griseus]
gi|344238558|gb|EGV94661.1| U6 snRNA-associated Sm-like protein LSm1 [Cricetulus griseus]
Length = 133
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ + E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQTRLEAEKLKVQALKDRGLSI 124
>gi|350593418|ref|XP_003359535.2| PREDICTED: hypothetical protein LOC100627320 [Sus scrofa]
Length = 267
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 153 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 212
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ + E ++ + LK+RGLS
Sbjct: 213 LEKESDTPLQQVSIEEILEEQRVEQQARLEAEKLKVQALKDRGLSI 258
>gi|157820263|ref|NP_001102346.1| U6 snRNA-associated Sm-like protein LSm1 [Rattus norvegicus]
gi|149057826|gb|EDM09069.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
Length = 133
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR EQ+ + E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVEQQSRLEAEKLKVQALKDRGLSI 124
>gi|110625667|ref|NP_080308.1| U6 snRNA-associated Sm-like protein LSm1 [Mus musculus]
gi|20177947|sp|Q8VC85.1|LSM1_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|18204794|gb|AAH21460.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|26334347|dbj|BAC30891.1| unnamed protein product [Mus musculus]
gi|148700874|gb|EDL32821.1| mCG14522 [Mus musculus]
Length = 133
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/106 (66%), Positives = 89/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
EKE LQQVS+E+IL QR +Q+ + E ++ + LK+RGLS
Sbjct: 79 LEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDRGLSI 124
>gi|47209042|emb|CAF91744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 133
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 88/106 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
+K LQQVS+E+IL QR EQ+ KQE ++ + LK+RGLS
Sbjct: 79 LDKPCDAFLQQVSIEEILEEQRMEQQAKQETEKVKVQALKDRGLSL 124
>gi|57525910|ref|NP_001003551.1| U6 snRNA-associated Sm-like protein LSm1 [Danio rerio]
gi|50417210|gb|AAH78334.1| Zgc:101136 [Danio rerio]
Length = 133
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/107 (69%), Positives = 91/107 (85%), Gaps = 2/107 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG LRS+DQFANLVLH+T+ERIHVG ++GDIPRGIF++RGENVVL+GEVD
Sbjct: 19 LVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVVRGENVVLLGEVD 78
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
+KE C Q LQ+VS+E+IL QR EQ+ KQE R+ + +KERGLS
Sbjct: 79 LDKE-CDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKERGLSI 124
>gi|410925290|ref|XP_003976114.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Takifugu
rubripes]
Length = 133
Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K LQQVS+E+IL QR EQ+ KQE ++ + LK+RGLS +P N D +
Sbjct: 79 LDKPCDTFLQQVSIEEILEEQRMEQQAKQETEKVKLQALKDRGLS-IPKADNLDEY 133
>gi|290562435|gb|ADD38614.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 94/118 (79%), Gaps = 2/118 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIG LRSVDQ+ANLVLH+ IERIHVGN YGDIPRGIF++RGENVVL+GE+D
Sbjct: 21 MVLLRDGRTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGEID 80
Query: 61 --KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+E E +L++VS+E+IL AQ K+Q ++E +R+ A+ K+RGL+ ++ DD
Sbjct: 81 EVRESEANSKLREVSLEEILEAQTKQQFEREEENRIRARAFKKRGLTNTAEISMDDFM 138
>gi|432874730|ref|XP_004072564.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Oryzias
latipes]
Length = 133
Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K LQQVS+E+IL QR +Q+ KQE ++ + LK+RGLS +P N D +
Sbjct: 79 LDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKVKMQALKDRGLS-IPKADNLDEY 133
>gi|348516098|ref|XP_003445576.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Oreochromis niloticus]
Length = 133
Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/116 (62%), Positives = 93/116 (80%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K LQQVS+E+IL QR +Q+ KQE ++ + LK+RGLS +P N D +
Sbjct: 79 MDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKVKMQVLKDRGLS-IPKADNLDEY 133
>gi|209733634|gb|ACI67686.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
gi|303661389|gb|ADM16038.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 144 bits (363), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/116 (62%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K LQQVS+E+IL QR +Q+ KQE + LK+RGLS +P N D +
Sbjct: 79 MDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKAKVTALKDRGLS-IPKADNLDEY 133
>gi|225713684|gb|ACO12688.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/118 (60%), Positives = 93/118 (78%), Gaps = 2/118 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGRTLIG LR VDQ+ANLVLH+ IERIHVGN YGDIPRGIF++RGENVVL+GE+D
Sbjct: 21 MVLLRDGRTLIGILRPVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGEID 80
Query: 61 --KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+E E +L++VS+E+IL AQ K+Q ++E +R+ A+ K+RGL+ ++ DD
Sbjct: 81 EVRESEANSKLREVSLEEILEAQTKQQFEREEENRIRARAFKKRGLTNTAEISMDDFM 138
>gi|291228074|ref|XP_002734007.1| PREDICTED: Lsm1 protein-like [Saccoglossus kowalevskii]
Length = 134
Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 87/104 (83%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRG+F++RGENVVL+GE+D
Sbjct: 19 LVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKEYGDIPRGVFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
E E L++VS+++IL AQR EQ KQE+ + K L ERG+
Sbjct: 79 LENEGKIPLKEVSIDEILEAQRSEQLEKQEQEKARNKALLERGI 122
>gi|209737588|gb|ACI69663.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 168
Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGE+VVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGESVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
+K LQQVS+E+IL QR +Q+ KQE + LK+RGLS +P N D
Sbjct: 79 MDKPCDTVLQQVSIEEILEEQRLQQQAKQETEKAKVTALKDRGLS-IPKADNLD 131
>gi|209733674|gb|ACI67706.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 71/116 (61%), Positives = 91/116 (78%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K LQQVS+E+IL QR +Q+ KQ+ + LK+RGLS +P N D +
Sbjct: 79 IDKLCDNVLQQVSIEEILEEQRLQQQAKQKTEKAKVTALKDRGLS-IPKADNLDEY 133
>gi|390358403|ref|XP_003729250.1| PREDICTED: LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein
LSm1-like [Strongylocentrotus purpuratus]
Length = 134
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 84/104 (80%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIG LRS+DQFANLVLH+TIERIHVG QYGDIPRG+ ++RGENVVL+GE+D
Sbjct: 19 LVVLRDGRTLIGILRSIDQFANLVLHRTIERIHVGRQYGDIPRGVXVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
E E L++VS+++IL AQR EQ QE + K+L ERGL
Sbjct: 79 TENESTHSLEEVSIDEILEAQRDEQLKNQEEEKTRNKKLLERGL 122
>gi|209734138|gb|ACI67938.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 132
Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/114 (62%), Positives = 90/114 (78%), Gaps = 1/114 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEMD 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
+K LQQVS+E+IL QR +Q+ KQ+ + LK+RGLS +P N D
Sbjct: 79 IDKLCDNVLQQVSIEEILEEQRLQQQAKQKTEKAKVTALKDRGLS-IPKADNLD 131
>gi|387915626|gb|AFK11422.1| u6 snRNA-associated Sm-like protein LSm1-like protein
[Callorhinchus milii]
Length = 133
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 90/106 (84%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLRSVDQFANLVLH+T+E IHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVVLRDGRTLIGYLRSVDQFANLVLHQTVEGIHVGRKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
E+E LQ+VS+E+IL AQR +Q+ +QE + +K LKERGLS
Sbjct: 79 LERETDTPLQRVSIEEILEAQRVQQQERQEAEKTKSKALKERGLSI 124
>gi|196009920|ref|XP_002114825.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
gi|190582887|gb|EDV22959.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
Length = 137
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/114 (57%), Positives = 93/114 (81%), Gaps = 1/114 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M++L+DGRTLIG+LRSVDQFANLVL TIERIHVG QYGDIPRG+F+IRG+NV ++GE+D
Sbjct: 23 MIVLKDGRTLIGFLRSVDQFANLVLQDTIERIHVGKQYGDIPRGLFVIRGDNVAILGEMD 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
+K+ QLQ+VS+EDIL+AQR++ + + E +++ + + ERGL D+ ++D
Sbjct: 83 -DKKDLTQLQKVSIEDILDAQREQLQRRDEETKLRNQAMLERGLQPHGDVGSED 135
>gi|405961598|gb|EKC27377.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 133
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
E E+ PQL++V ++DIL QR+EQ KQ+ K + ERGL +L +DDLF
Sbjct: 79 LENENNPQLEEVPIDDILEMQREEQIQKQQEEERKKKSMLERGLQPHSEL-HDDLF 133
>gi|405961597|gb|EKC27376.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 124
Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 10 LVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGEID 69
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
E E+ PQL++V ++DIL QR+EQ KQ+ K + ERGL +L +DDLF
Sbjct: 70 LENENNPQLEEVPIDDILEMQREEQIQKQQEEERKKKSMLERGLQPHSEL-HDDLF 124
>gi|156391102|ref|XP_001635608.1| predicted protein [Nematostella vectensis]
gi|156222703|gb|EDO43545.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/85 (72%), Positives = 79/85 (92%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVL +TIERI+VG++YGDIPRGIF++RGEN+VL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLQETIERIYVGDRYGDIPRGIFLVRGENLVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQ 85
++KE +LQ+VSV++IL AQR EQ
Sbjct: 79 QDKEVQSKLQEVSVDEILEAQRAEQ 103
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/116 (57%), Positives = 89/116 (76%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDGR LIG+LRS DQFANLVL TIERI+VG+ YGDIPRGIF+IRGENVVL+GE+D
Sbjct: 21 MVVLRDGRKLIGFLRSFDQFANLVLQDTIERIYVGDAYGDIPRGIFLIRGENVVLLGEID 80
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K+ L+Q+ VE+IL QR+EQE + + ++ K + +RGL V D + +D +
Sbjct: 81 LQKDAQTTLRQLPVEEILVLQREEQERIEAQQKIQYKVMLDRGLQPVTDALYEDTY 136
>gi|198437342|ref|XP_002124367.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1
(Cancer-associated Sm-like) (Small nuclear ribonuclear
CaSm) [Ciona intestinalis]
Length = 133
Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 86/104 (82%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLRSVDQFANLVLHKT+ER+HVG+ YGDIPRGIF+IRGENVVL+GEVD
Sbjct: 19 LVMLRDGRILIGYLRSVDQFANLVLHKTVERVHVGSMYGDIPRGIFVIRGENVVLLGEVD 78
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
E E L++VS+E IL A+ K QE KQE+ + K +KERGL
Sbjct: 79 IEHEERKDLEKVSIEKILEAKSKLQEEKQEKEKTKFKAMKERGL 122
>gi|340385838|ref|XP_003391415.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 90/115 (78%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LR GRTLIGYLRS+DQFANL+L T+ERIHVG +YGDIPRGIF++RGEN+VL GE++
Sbjct: 36 LVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEIE 95
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
K E +L++VS+E+I+ AQR+E E +++ ++ + L+++GL V D D L
Sbjct: 96 KSLEESMELEKVSIEEIIEAQRQENEKREKENKRKEELLRQKGLPVVRDESEDIL 150
>gi|221129197|ref|XP_002167435.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Hydra
magnipapillata]
Length = 140
Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/115 (59%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIG LRSVDQFAN+VL TIERIHVGN+YGDI RG+FI+RG+N+VL+GE+D
Sbjct: 24 LVVLRDGRTLIGELRSVDQFANVVLENTIERIHVGNKYGDISRGVFIVRGDNIVLLGEMD 83
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS-FVPDLINDD 114
KE L++V+VE+IL AQR E K++ + ERGL+ F+PD+ DD
Sbjct: 84 ALKEKSSGLKEVTVEEILEAQRVELLQKEQLEKRYNYLRHERGLAPFMPDMGLDD 138
>gi|391341680|ref|XP_003745155.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Metaseiulus occidentalis]
Length = 166
Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 88/117 (75%), Gaps = 3/117 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MVLLRDGR LIG LRS+DQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENVVL+GE +
Sbjct: 49 MVLLRDGRVLIGILRSIDQFANLVLHRTIERIHVGKKYGDIPRGVFIVRGENVVLLGEYE 108
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL---SFVPDLINDD 114
+ +E LQ+V +++I+ QR++ K+++ + L+ERGL S + NDD
Sbjct: 109 ESREGLVGLQKVGIDEIIEIQREDLRAKKDQEDRRIRTLRERGLLQYSLFDNAQNDD 165
>gi|324527990|gb|ADY48863.1| U6 snRNA-associated Sm-like protein LSm1 [Ascaris suum]
Length = 141
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 80/102 (78%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+LRDGRTLIGYLR++DQFANLVLH+T+ERIHV YGDIPRGIF+IRGENVVL GE+D+
Sbjct: 24 VILRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIPRGIFLIRGENVVLAGEIDE 83
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERG 103
EKE L VSV++IL+ QR++ E K+ + +K RG
Sbjct: 84 EKEKHTGLTCVSVDEILSMQREKAEAKERFEEAKNRAMKGRG 125
>gi|82571526|gb|AAI10195.1| LSM1 protein [Bos taurus]
Length = 95
Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 71/77 (92%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKEHCPQLQQVSVEDI 77
EKE LQQVS+E+I
Sbjct: 79 LEKESDTPLQQVSIEEI 95
>gi|443683303|gb|ELT87602.1| hypothetical protein CAPTEDRAFT_179858 [Capitella teleta]
Length = 136
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 89/116 (76%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIG+LRS+DQFANLVLH+TIERIHVG ++G IP GIF+IRGENVVL+GE+D
Sbjct: 21 LVVLRDGRTLIGFLRSIDQFANLVLHRTIERIHVGKKFGTIPHGIFLIRGENVVLLGEID 80
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
E E L++V +E+IL QR +Q K+ + + K LKERGL+ D I +D F
Sbjct: 81 LENEDKLPLEEVPIEEILELQRNQQAEKKAEAELKKKALKERGLAPQGDPIQEDFF 136
>gi|313213235|emb|CBY37078.1| unnamed protein product [Oikopleura dioica]
gi|313227656|emb|CBY22803.1| unnamed protein product [Oikopleura dioica]
Length = 135
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIG LR++DQFANLVLH+T+ERIHV +GDIPRGIF++RGENV L GEVD
Sbjct: 20 LVVLRDGRTLIGILRAIDQFANLVLHQTVERIHVDGFFGDIPRGIFVVRGENVALFGEVD 79
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
E E+ LQ+VSVE+IL ++ K E R ++ ++ERGL D + DDL+
Sbjct: 80 LENENRGNLQEVSVEEILELHQQVTARKDELERRKSRAMRERGLIPHQD-VPDDLY 134
>gi|340376043|ref|XP_003386543.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 89/115 (77%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LR GRTLIGYLRS+DQFANL+L T+ERIHVG +YGDIPRGIF++RGEN+VL GE++
Sbjct: 36 LVVLRGGRTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEIE 95
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
K E +L++VS+E+I+ AQR+E E +++ + + L+++GL V D D L
Sbjct: 96 KSLEESMELEKVSIEEIIEAQRQENEKREKEKKRKEELLRQKGLPVVRDESEDIL 150
>gi|427777815|gb|JAA54359.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 204
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/182 (41%), Positives = 93/182 (51%), Gaps = 69/182 (37%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIP------------------- 42
V LRDGRTLIGYLRS+DQFANLVLH+TIERIHVG QYGDIP
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVXXXRSIDQFANLVL 81
Query: 43 -----------------RGIFIIRGENVVLM----------------------------- 56
RGIF+IRG+NVVL+
Sbjct: 82 HQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDEDKEKDADLEEVSVEDILEVQRIEA 141
Query: 57 ----GEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLIN 112
GE+D++KE L++VSVEDIL QR E + KQE R AK +K+RGL + ++ +
Sbjct: 142 DAKXGEIDEDKEKDADLEEVSVEDILEVQRIEADAKQELERQRAKAMKDRGLHYHQEITH 201
Query: 113 DD 114
DD
Sbjct: 202 DD 203
>gi|170578282|ref|XP_001894349.1| U6 snRNA-associated Sm-like protein LSm [Brugia malayi]
gi|158599116|gb|EDP36811.1| U6 snRNA-associated Sm-like protein LSm, putative [Brugia malayi]
gi|402591550|gb|EJW85479.1| LSM1 protein [Wuchereria bancrofti]
Length = 139
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLR++DQFANLVLH+T+ERIHV N YGDI RG+F+IRGENVVL GE+D
Sbjct: 23 LVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDNYYGDIERGVFLIRGENVVLAGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP--DLINDD 114
+ KE L +S ++IL+ Q+++ E K+ K +K RG P D+ ND+
Sbjct: 83 ETKEQLSGLIPLSAKEILSLQQEKIEEKERFEEARNKIMKGRGRRAKPAIDVFNDE 138
>gi|312084671|ref|XP_003144370.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
gi|307760468|gb|EFO19702.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
Length = 139
Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGRTLIGYLR++DQFANLVLH+T+ERIHV YGDI RG+F+IRGENVVL GE+D
Sbjct: 23 LVVLRDGRTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIQRGVFLIRGENVVLAGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP--DLINDD 114
+ KE L +S ++IL+ QR++ E K+ K +K RG P D+ ND+
Sbjct: 83 ETKEQSSGLIPLSAKEILSLQREKIEEKERFEEARNKIMKGRGRRVKPVVDVFNDE 138
>gi|349805161|gb|AEQ18053.1| putative u6 snrna-associated sm protein lsm1 [Hymenochirus
curtipes]
Length = 83
Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 62/64 (96%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGRTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D
Sbjct: 19 LVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEID 78
Query: 61 KEKE 64
EKE
Sbjct: 79 LEKE 82
>gi|449270863|gb|EMC81511.1| U6 snRNA-associated Sm-like protein LSm1, partial [Columba livia]
Length = 108
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/88 (65%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNA 80
ANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D EKE LQQVS+E+IL
Sbjct: 14 ANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEE 73
Query: 81 QRKEQEVKQERSRMLAKRLKERGLSFVP 108
QR EQ+ KQE ++ + LKERGL VP
Sbjct: 74 QRVEQQAKQESEKLKVQALKERGLC-VP 100
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 68/82 (82%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDGR LIG LRS DQFANLVL TIERI+V YGDIPRG+F+IRGENVVL+GE+D
Sbjct: 24 MVVLRDGRKLIGILRSFDQFANLVLQDTIERIYVRGCYGDIPRGVFLIRGENVVLLGEID 83
Query: 61 KEKEHCPQLQQVSVEDILNAQR 82
+KE L+QVSVE+IL AQR
Sbjct: 84 VDKEDQINLRQVSVEEILVAQR 105
>gi|281346897|gb|EFB22481.1| hypothetical protein PANDA_005488 [Ailuropoda melanoleuca]
Length = 96
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 69/87 (79%)
Query: 20 FANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILN 79
ANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D EKE LQQVS+E+IL
Sbjct: 1 IANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILE 60
Query: 80 AQRKEQEVKQERSRMLAKRLKERGLSF 106
QR EQ+ K E ++ + LK+RGLS
Sbjct: 61 EQRVEQQTKLEAEKLKVQALKDRGLSI 87
>gi|297682708|ref|XP_002819054.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pongo abelii]
Length = 99
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 68/86 (79%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNA 80
NLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+D EKE LQQVS+E+IL
Sbjct: 5 PNLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEE 64
Query: 81 QRKEQEVKQERSRMLAKRLKERGLSF 106
QR EQ+ K E ++ + LK+RGLS
Sbjct: 65 QRVEQQTKLEAEKLKVQALKDRGLSI 90
>gi|388582146|gb|EIM22452.1| RNA cap binding protein [Wallemia sebi CBS 633.66]
Length = 146
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 72/105 (68%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V LRDGR +IG LRS DQFANLVL+ +ERIH N+Y DIPRGIF+IRGENVVLMGEVD
Sbjct: 22 LVALRDGRKIIGVLRSFDQFANLVLNDAVERIHALNEYADIPRGIFLIRGENVVLMGEVD 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS 105
+ E QL+Q +E +L + E + + + + LK+RG
Sbjct: 82 LDTEDTIQLKQAPIEQVLQKSLQLDEERAIKDSIRDEILKQRGFC 126
>gi|403294428|ref|XP_003938189.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Saimiri
boliviensis boliviensis]
Length = 102
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 58/59 (98%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+VLLRDGRTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|167520007|ref|XP_001744343.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777429|gb|EDQ91046.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 66/93 (70%), Gaps = 3/93 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+ +LRDGR LIGYLRSVDQFANLVL T+ER +VGN+YGD+P GI+IIRGENV L+GE+D
Sbjct: 25 ICVLRDGRKLIGYLRSVDQFANLVLQDTVERYYVGNEYGDVPVGIYIIRGENVALLGEMD 84
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
+ L+QV E IL RK E+ R
Sbjct: 85 ASADQSRFLKQVDAETIL---RKHAELPDADKR 114
>gi|430813865|emb|CCJ28830.1| unnamed protein product [Pneumocystis jirovecii]
Length = 129
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 75/105 (71%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDG+ LIG LRS DQ+ANLVL T+ERI+V YGDIPRG+FIIRGENVVL+GE+D
Sbjct: 25 MVILRDGKKLIGILRSFDQYANLVLQGTVERIYVDQVYGDIPRGVFIIRGENVVLVGEID 84
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS 105
+K+ LQ+VS + N Q+ + ++++ + + K L G S
Sbjct: 85 LDKKDDLSLQKVSPVEAFNKQKIQNDLRKIKEKAQCKALHRLGRS 129
>gi|119481233|ref|XP_001260645.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
gi|119408799|gb|EAW18748.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
Length = 177
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y DIPRGIF++RGENV+L+GE+D
Sbjct: 62 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEID 121
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE P LQ+ +++ ++KE ++ + RL+ L F P+ + LF
Sbjct: 122 LDKEDDIPPHLQKAPFQEVFELKKKEDSKRKITDKKSHNRLQ--SLGFEPEHSGEILF 177
>gi|71001662|ref|XP_755512.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus fumigatus
Af293]
gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus Af293]
gi|159129580|gb|EDP54694.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus A1163]
Length = 177
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y DIPRGIF++RGENV+L+GE+D
Sbjct: 62 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEID 121
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE P LQ+ +++ ++KE ++ + +L+ L F P+ + LF
Sbjct: 122 LDKEDDIPPHLQKAPFQEVFELKKKEDSRRKITDKKSHNKLQ--SLGFEPEHSGEILF 177
>gi|115383876|ref|XP_001208485.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
gi|114196177|gb|EAU37877.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
Length = 171
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y DIPRGIF++RGENV+L+GE+D
Sbjct: 56 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERMYAGNLYADIPRGIFLVRGENVLLLGEID 115
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE +Q+ S +++ ++KE+ ++ + +L+ GL F P+ + LF
Sbjct: 116 LDKEDDIPSHVQKASFQEVFELKKKEEANRKTGDKKRHDKLQ--GLGFEPEHSGEILF 171
>gi|317026774|ref|XP_001399521.2| small nuclear ribonucleoprotein (LSM1) [Aspergillus niger CBS
513.88]
gi|350634459|gb|EHA22821.1| hypothetical protein ASPNIDRAFT_174735 [Aspergillus niger ATCC
1015]
gi|358365679|dbj|GAA82301.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 174
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y DIPRGIF++RGENV+L+GE+D
Sbjct: 59 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEID 118
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE P +Q+ S +++ ++KE ++ + +L+ L F P+ + LF
Sbjct: 119 LDKEDDIPPHIQRASFQEVFELKKKEDGARKVGDKKRHGKLQT--LGFEPEHSGEILF 174
>gi|134056432|emb|CAL00599.1| unnamed protein product [Aspergillus niger]
Length = 143
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/118 (46%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y DIPRGIF++RGENV+L+GE+D
Sbjct: 28 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFLVRGENVLLLGEID 87
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE P +Q+ S +++ ++KE ++ + +L+ L F P+ + LF
Sbjct: 88 LDKEDDIPPHIQRASFQEVFELKKKEDGARKVGDKKRHGKLQT--LGFEPEHSGEILF 143
>gi|290987543|ref|XP_002676482.1| predicted protein [Naegleria gruberi]
gi|284090084|gb|EFC43738.1| predicted protein [Naegleria gruberi]
Length = 150
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDG+ LIG LR DQF N+ L KT+ERI V ++YGD+ G++I+RGENVVLMGEVD
Sbjct: 34 MVILRDGKKLIGILRCYDQFVNMTLEKTVERIVVEDKYGDLDVGLYIVRGENVVLMGEVD 93
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERG 103
+ ++ L+QV V++IL + EQE ++ERS++ L+ RG
Sbjct: 94 ESRDLS--LKQVPVDEILMLSKLEQEKEEERSKLKQLHLRNRG 134
>gi|407917694|gb|EKG10998.1| hypothetical protein MPH_12001 [Macrophomina phaseolina MS6]
Length = 170
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV LRDGR LIG LRS DQFANLVL +TIERI V N Y DI RG+F++RGENV+L+GE+D
Sbjct: 55 MVALRDGRKLIGVLRSWDQFANLVLQETIERIFVQNLYADINRGVFLVRGENVLLLGEID 114
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+K ++ P+ +Q E + Q++E E + +R ++ K L+ G
Sbjct: 115 LDKDDYIPEPFEQAPAEKVFALQKQEIEERMKRDKLRRKHLRSHGF 160
>gi|345565028|gb|EGX47984.1| hypothetical protein AOL_s00081g311 [Arthrobotrys oligospora ATCC
24927]
Length = 262
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 66/84 (78%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQ+ANLVL TIER++ N Y D+PRG +I+RGENV+L+GE+D
Sbjct: 31 VIVLRDGRKLIGTLRSYDQYANLVLQDTIERLYSQNLYADVPRGCYIVRGENVLLLGEID 90
Query: 61 KEKEHCPQLQQVSVEDILNAQRKE 84
+KE L+Q +V++I +AQR E
Sbjct: 91 LDKEDDTPLKQATVDEIYDAQRAE 114
>gi|326436185|gb|EGD81755.1| hypothetical protein PTSG_02467 [Salpingoeca sp. ATCC 50818]
Length = 132
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/119 (46%), Positives = 78/119 (65%), Gaps = 13/119 (10%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+ +LRDGR LIGYLR+VDQFANLV +ERI+V + YGDI +GI I+RGENVVL+GE+D
Sbjct: 20 ICVLRDGRKLIGYLRTVDQFANLVFQDAVERIYVDDYYGDIQQGIVIVRGENVVLLGELD 79
Query: 61 KEKEHCPQLQQVSVEDILN------AQRKEQEVKQERSRMLAKRLKERGLSFVPDLIND 113
E +L +VS DIL +RK+ E ++ + R+ +R + PD+++D
Sbjct: 80 AESAQNSKLTRVSAADILQRKQVQLEERKKSEQEERQRRLTMQREQ-------PDIVDD 131
>gi|164657750|ref|XP_001730001.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
gi|159103895|gb|EDP42787.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
Length = 147
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 7/112 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L+G LRS DQFANLVL +ERI +G++YGD+P+G FI+RGENVVLMGE+D
Sbjct: 27 IVVLRDGRKLLGVLRSYDQFANLVLQDAVERIFLGHRYGDVPKGTFIVRGENVVLMGEID 86
Query: 61 KEKEH------CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRL-KERGLS 105
EKE + +V +L E E K + + A L +ERG S
Sbjct: 87 LEKEENIPASIASSIPSTAVPQLLETLAAENEYKAKWEQRRAAVLRRERGFS 138
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN V+ + ER+ VG+ Y DIP G++IIRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELD 83
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQE 86
EKE P Q+ QVS +I AQ+ E+E
Sbjct: 84 VEKEELPAQMVQVSEAEIKRAQKAEKE 110
>gi|19112312|ref|NP_595520.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe 972h-]
gi|3287944|sp|P87173.1|LSM1_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|2117304|emb|CAB09117.1| mRNA decapping complex subunit (predicted) [Schizosaccharomyces
pombe]
Length = 140
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 81/118 (68%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANL+L TIERI+V + YGDI RG++I+RGENVVL+GE+D
Sbjct: 25 IVVLRDGKKLIGILRSFDQFANLMLQYTIERIYVDDMYGDIDRGVYIVRGENVVLLGELD 84
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE+ QL+++ E++ + +E K++ R K L G S D +DDL+
Sbjct: 85 LDKEYDAVKQLRRMPAEELYPLAKLHEEEKKKNIREKGKYLHSVGFSV--DGGHDDLY 140
>gi|255946201|ref|XP_002563868.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588603|emb|CAP86719.1| Pc20g13900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 177
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 77/119 (64%), Gaps = 6/119 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLV T+ER++ G Y D+PRGIFI+RGENV+L+GEVD
Sbjct: 62 VLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGQLYADVPRGIFIVRGENVLLLGEVD 121
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKE-RGLSFVPDLINDDLF 116
++E P L + E++ ++KE ++ + KR E + L F P+ + LF
Sbjct: 122 LDREDDIPPTLTRAPFEEVFELKKKEDAKRKTGDK---KRYDELQALGFEPEHSGEILF 177
>gi|302838708|ref|XP_002950912.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
gi|300264029|gb|EFJ48227.1| hypothetical protein VOLCADRAFT_109782 [Volvox carteri f.
nagariensis]
Length = 127
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 71/97 (73%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR ++G LRS DQFANLV+ +ERI VG+QYGDIP G+ +IRGENVVL+G VD
Sbjct: 24 LIVLRDGRKVLGVLRSFDQFANLVIEGAVERIIVGDQYGDIPLGLQVIRGENVVLLGRVD 83
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+EK+ L QVS I A + E+E+ + +S + A+
Sbjct: 84 EEKDAPEGLTQVSPAAIKEALKGEKELNKLKSTIRAR 120
>gi|443898710|dbj|GAC76044.1| UDP-glucose pyrophosphorylase [Pseudozyma antarctica T-34]
Length = 148
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANLVL T+ER+ VGN+YGDI RG+F++RGENVVLMGE+D
Sbjct: 27 LVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVVLMGEID 86
Query: 61 KEKEH------CPQLQQVSVEDILNAQRKEQEVKQE 90
+ E L ++ +L A+ E E K +
Sbjct: 87 LDAEDEVPPSIAAPLPPSALPQLLAAKEAEAESKAK 122
>gi|343429796|emb|CBQ73368.1| related to LSM1-Sm-like (Lsm) protein [Sporisorium reilianum SRZ2]
Length = 148
Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANLVL T+ER+ VGN+YGDI RG+F++RGENVVLMGE+D
Sbjct: 27 LVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIARGVFLVRGENVVLMGEID 86
Query: 61 KEKEH------CPQLQQVSVEDILNAQRKEQEVKQE 90
+ E L ++ +L A+ E E K +
Sbjct: 87 LDAEDEVPPSIAAPLPPSALPQLLAAKEAEAESKAK 122
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella moellendorffii]
Length = 127
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L+G LRS DQFANLVL K +ERI VG+ Y D+P G++IIRGENVVL+GE+D
Sbjct: 23 LVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLYCDLPLGLYIIRGENVVLVGELD 82
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+ K+ P + VS +I AQ+ E++ + + M
Sbjct: 83 QTKKDLPAHMVLVSAAEIKRAQKAEKDATELKGTM 117
>gi|121715718|ref|XP_001275468.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
gi|119403625|gb|EAW14042.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
clavatus NRRL 1]
Length = 177
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIERI+ G Y +IPRGIF++RGENV+L+GE+D
Sbjct: 62 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERIYAGGLYAEIPRGIFLVRGENVLLLGEID 121
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE +Q+ ++ ++KE ++ + +L+ GL F P+ + LF
Sbjct: 122 LDKEDDVPAHVQKAPFPEVFELKKKEDAARKRMDKKSHNKLQ--GLGFEPEHSGEILF 177
>gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
gi|46098907|gb|EAK84140.1| hypothetical protein UM02968.1 [Ustilago maydis 521]
Length = 148
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANLVL T+ER+ VGN+YGD+ RGIF++RGENVVLMGE+D
Sbjct: 27 LVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDVARGIFLVRGENVVLMGEID 86
Query: 61 KEKEH------CPQLQQVSVEDILNAQRKEQEVKQE 90
+ E L ++ +L A+ E E K +
Sbjct: 87 LDAEDEVPPSIAAPLPPSALPQLLAAKEAEAESKAK 122
>gi|297829970|ref|XP_002882867.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
gi|297328707|gb|EFH59126.1| hypothetical protein ARALYDRAFT_478821 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG QY DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + +VS +I AQ+ E+E + R M
Sbjct: 84 TEREELPPNMIRVSEAEIKRAQKVEREASELRGTM 118
>gi|18400270|ref|NP_566476.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|30682974|ref|NP_850580.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana]
gi|27754337|gb|AAO22620.1| putative Sm protein [Arabidopsis thaliana]
gi|28393853|gb|AAO42334.1| putative Sm protein [Arabidopsis thaliana]
gi|332641944|gb|AEE75465.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
gi|332641945|gb|AEE75466.1| U6 snRNA-associated Sm-like protein LSm1 [Arabidopsis thaliana]
Length = 128
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG QY DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + +VS +I AQ+ E+E + R M
Sbjct: 84 TEREELPPHMIRVSEAEIKRAQKVEREASELRGTM 118
>gi|339248761|ref|XP_003373368.1| putative LSM domain protein [Trichinella spiralis]
gi|316970522|gb|EFV54449.1| putative LSM domain protein [Trichinella spiralis]
Length = 139
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR +IGYLRSVDQFAN+VL T+ERI V N Y DI G+FI+RGENV L+GE+D
Sbjct: 23 LVILRDGRNMIGYLRSVDQFANIVLEDTVERIVVNNMYSDISMGLFIVRGENVFLVGELD 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP--DLINDDLF 116
+ K L + ++++ +N Q K++E K+++ + + LK GL F P D++ DD +
Sbjct: 83 QNKPMEEILTKTTIKEAVNLQAKKEEEKKKKLKEREEMLKALGL-FQPSYDILQDDTY 139
>gi|388853835|emb|CCF52556.1| related to LSM1-Sm-like (Lsm) protein [Ustilago hordei]
Length = 148
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANLVL T+ER+ VGN+YGDI RG+F++RGENVVLMGE+D
Sbjct: 27 LVVLRDGKKLIGVLRSYDQFANLVLQDTVERVFVGNRYGDIVRGVFLVRGENVVLMGEID 86
Query: 61 KEKEH------CPQLQQVSVEDILNAQRKEQEVKQE 90
+ E L ++ +L A+ E E K +
Sbjct: 87 LDAEDEVPPSIAAPLPPSALPQLLAAKEAEAESKAK 122
>gi|50309253|ref|XP_454633.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643768|emb|CAG99720.1| KLLA0E15159p [Kluyveromyces lactis]
Length = 179
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR G LR+ DQ+ANL+L T+ERI++ N+YG+ RG+F+IRGENVV++GE
Sbjct: 62 FVLLRDGRMFFGVLRTFDQYANLILQHTVERIYIEGENKYGECDRGVFMIRGENVVMLGE 121
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P +++V E+ + + K EVK + + KRL + GL+ D DL+
Sbjct: 122 VDIDKEDAPLESMERVPFEEAESYKEKMDEVKYKENTAKGKRLAQLGLT--TDFNKGDLY 179
>gi|9294633|dbj|BAB02972.1| unnamed protein product [Arabidopsis thaliana]
Length = 118
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/95 (54%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG QY DIP G+++IRGENVVL+GE+D
Sbjct: 14 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEQYCDIPLGLYVIRGENVVLIGELD 73
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + +VS +I AQ+ E+E + R M
Sbjct: 74 TEREELPPHMIRVSEAEIKRAQKVEREASELRGTM 108
>gi|449447922|ref|XP_004141715.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
gi|449480489|ref|XP_004155908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cucumis
sativus]
Length = 128
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL + ER+ VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEV 87
EKE P + VS +I AQ+ E+E
Sbjct: 84 LEKEELPPHMTHVSAVEIKRAQKAEREA 111
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P+ + +VS +I AQ+ E+E + M
Sbjct: 84 LEREELPEHMTRVSTAEIKRAQKAEREASDLKGTM 118
>gi|323650499|gb|ADX97330.1| small nuclear ribonucleoprotein [Mangifera indica]
Length = 128
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRD R L+G LRS DQFAN+VL ERI VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDNRKLLGLLRSFDQFANVVLEGACERIIVGDLYCDIPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
EKE P + VS E+I AQ+ E++ + M
Sbjct: 84 LEKEELPPHMTHVSTEEIKRAQKAEKDATVLKGSM 118
>gi|255583960|ref|XP_002532727.1| lsm1, putative [Ricinus communis]
gi|223527535|gb|EEF29658.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG+ Y DIP G++IIRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYIIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
EKE P + +VS +I AQ+ E++ + M
Sbjct: 84 LEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTM 118
>gi|116783136|gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR LIG LRS DQFAN VL +ERI VG+ Y D+P G+++IRGENVVL+GE+D
Sbjct: 68 LVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDLYCDLPLGLYVIRGENVVLIGELD 127
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + VS +I AQ+ E++ + M
Sbjct: 128 PEREELPANMIHVSATEIKRAQKAERDATDLKGSM 162
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 74/108 (68%), Gaps = 4/108 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL TIER++ GN Y +I RGIF++RGENV+L+GE+D
Sbjct: 59 VLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYAEISRGIFLVRGENVLLLGEID 118
Query: 61 KEKEH--CPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
+KE P +Q+ E++ +++E ++ + +L+ GL F
Sbjct: 119 LDKEDDIPPHVQKAPFEEVFKLKKQEDSARKTGDKKRQGKLQ--GLGF 164
>gi|448525435|ref|XP_003869115.1| Lsm1 protein [Candida orthopsilosis Co 90-125]
gi|380353468|emb|CCG22978.1| Lsm1 protein [Candida orthopsilosis]
Length = 162
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 9/113 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---GNQYGDIPRGIFIIRGENVVLMG 57
VLLRDGR G LR+ DQFANLVL T ERI+V ++G+I RG+FI+RGENVV+MG
Sbjct: 44 FVLLRDGRNFFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENVVMMG 103
Query: 58 E--VDKEKEHCPQLQQVSVEDILNAQRKEQE--VKQERSRMLAKRLKERGLSF 106
E +D+E +H LQQ+ E Q+ QE +K+E+S+ K L E+GL +
Sbjct: 104 ELDIDREDDHLETLQQIPFEQAEQEQKLNQEKLIKEEKSKQ--KTLFEKGLIY 154
>gi|356560171|ref|XP_003548368.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Glycine
max]
Length = 121
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 17 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 76
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P+ + +VS +I AQ+ E+E + M
Sbjct: 77 LEREELPEHMTRVSTAEIKRAQKAEREASDLKGTM 111
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL + ER+ VG+ Y DIP G++IIRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELD 83
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQE 86
EKE P + QV +I AQ+ E+E
Sbjct: 84 VEKEELPAHMLQVPEAEIKRAQKAEKE 110
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL + ER+ VG+ Y DIP G++IIRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDIPLGLYIIRGENVVLIGELD 83
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQE 86
EKE P + QV +I AQ+ E+E
Sbjct: 84 VEKEELPAHMVQVPEAEIKRAQKAEKE 110
>gi|168017010|ref|XP_001761041.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687727|gb|EDQ74108.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG LRS DQFAN+VL +ERI VG Y D+P G++IIRGENVVL+GE+D
Sbjct: 23 LVILRDGRKLIGVLRSFDQFANVVLEGALERITVGELYCDLPLGLYIIRGENVVLIGELD 82
Query: 61 KEKEHCPQLQ-QVSVEDILNAQRKEQEVKQERSRM 94
E+E P +V+ +I AQ+ E++ + + M
Sbjct: 83 LEREELPSFMVRVTPTEIKQAQKAEKDATELKGTM 117
>gi|453089025|gb|EMF17065.1| Sm-like ribonucleo protein [Mycosphaerella populorum SO2202]
Length = 155
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV LRDGR LIG LRS DQF NLVL T+ER+ V + Y DI RG+F++RGENV+L+GE+D
Sbjct: 40 MVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVHHLYADIERGLFLVRGENVLLLGEID 99
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+K ++ P+ +Q S E + ++ E++ +++ ++ K+L E G
Sbjct: 100 LDKDDYVPEPFEQASAEKVFQLKKLEEQKRKQTDKVKQKKLAELGF 145
>gi|328856685|gb|EGG05805.1| hypothetical protein MELLADRAFT_36483 [Melampsora larici-populina
98AG31]
Length = 152
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 70/103 (67%), Gaps = 13/103 (12%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-----------NQYGDIPRGIFIIR 49
+V LRDGR+LIG LRS DQFANLVL IERIHVG QY DI RGI+++R
Sbjct: 25 LVSLRDGRSLIGVLRSYDQFANLVLQDAIERIHVGVGVGKDEERKTGQYADIWRGIYLVR 84
Query: 50 GENVVLMGEV--DKEKEHCPQLQQVSVEDILNAQRKEQEVKQE 90
GENVVL+GE+ D+E E + +Q+ +E+++N Q+ EQ + E
Sbjct: 85 GENVVLLGEIDLDREDEVIERCEQLPIEEVINLQKSEQVTRLE 127
>gi|225442069|ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera]
gi|147803430|emb|CAN62239.1| hypothetical protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRD R L+G LRS DQFAN VL ER+ VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
EKE P + +VS +I AQ+ E+E + M
Sbjct: 84 LEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTM 118
>gi|315051182|ref|XP_003174965.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
gi|311340280|gb|EFQ99482.1| hypothetical protein MGYG_02493 [Arthroderma gypseum CBS 118893]
Length = 204
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFAN+VL T+ER++ N Y DIPRG+F++RGENV+L+GE+D
Sbjct: 89 VLVLRDGRKLIGVLRSWDQFANIVLQDTVERLYAENLYADIPRGVFLVRGENVLLLGEID 148
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K + P+ +Q ++L +++ +E ++ + R + L+ L F P+ + LF
Sbjct: 149 LDKDDDIPEPYRQAPASEVLKLKKQAEEQRKRKDRKRSSHLQ--ALGFEPEHSGEILF 204
>gi|242073224|ref|XP_002446548.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|195605684|gb|ACG24672.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195619498|gb|ACG31579.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|241937731|gb|EES10876.1| hypothetical protein SORBIDRAFT_06g017930 [Sorghum bicolor]
gi|413918442|gb|AFW58374.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 84 REKDELPAHMTCVSEAEIRKAEKAEREARDLKGTM 118
>gi|388508644|gb|AFK42388.1| unknown [Medicago truncatula]
Length = 128
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN+VL ER+ VG+ Y D+P G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLLGLLRSFDQFANVVLKGACERVIVGDLYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
KE P + VS DI AQ+ E++ + M
Sbjct: 84 LGKEELPPHMTCVSEADIRKAQKAERDASDLKGTM 118
>gi|357163727|ref|XP_003579826.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG Y D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS DI A++ E+E + + M
Sbjct: 84 REKDELPSHMTCVSEADIRTAEKAEKEARDLKGTM 118
>gi|357450125|ref|XP_003595339.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355484387|gb|AES65590.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 128
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN+VL ER+ VG+ Y D+P G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
KE P + VS DI AQ+ E++ + M
Sbjct: 84 LGKEELPPHMTCVSEADIRKAQKAERDASDLKGTM 118
>gi|449298949|gb|EMC94963.1| hypothetical protein BAUCODRAFT_34961 [Baudoinia compniacensis UAMH
10762]
Length = 198
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV LRDGR LIG LRS DQF NLVL T+ER+ V N Y DI RG+F++RGENV L+GE+D
Sbjct: 83 MVALRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNVYADIDRGLFLVRGENVSLLGEID 142
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+K ++ P+ Q SVE + ++ E +++ + KRL + G
Sbjct: 143 LDKDDYIPEPYQLASVEKVFALKKAEDAERKKTDKTKQKRLADLGF 188
>gi|213410363|ref|XP_002175951.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
gi|212003998|gb|EEB09658.1| mRNA decapping complex subunit [Schizosaccharomyces japonicus
yFS275]
Length = 140
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 12/122 (9%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ LIG LRS DQFANL+L TIER++ YGDI RG++I+RGENVVL+GE+D
Sbjct: 25 IVILRDGKKLIGILRSFDQFANLMLQCTIERLYEDGMYGDIERGVYIVRGENVVLLGEID 84
Query: 61 KEKE------HCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDD 114
E+E P L + + I+ A RKE++ KQ ++R K L L F D +NDD
Sbjct: 85 LEREFEVERPFKPVLPE-QLYPIVKA-RKEEKKKQIKAR--NKVL--HSLGFSSDFVNDD 138
Query: 115 LF 116
L+
Sbjct: 139 LY 140
>gi|413918440|gb|AFW58372.1| hypothetical protein ZEAMMB73_585309, partial [Zea mays]
Length = 147
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 43 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELD 102
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 103 REKDELPAHMTCVSEAEIRKAEKAEREARDLKGTM 137
>gi|344303572|gb|EGW33821.1| hypothetical protein SPAPADRAFT_54105 [Spathaspora passalidarum
NRRL Y-27907]
Length = 166
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 83/121 (68%), Gaps = 10/121 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGE-- 58
VLLRDGR L G LR+ DQFANLVL T ERI++ +++ ++ RG+F++RGENVV+MGE
Sbjct: 51 FVLLRDGRNLFGILRTFDQFANLVLQDTYERIYLDDKFAEVYRGVFMVRGENVVMMGELD 110
Query: 59 VDKEKEHCPQLQQVS---VEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDL 115
+D+E +H +QQ+ ED L Q+ +Q V +++ R +K+L E+GL + D + D+
Sbjct: 111 IDREDDHLEVMQQIDFREAEDELK-QKHKQIVSEQKIR--SKKLLEKGL--INDFVRGDM 165
Query: 116 F 116
+
Sbjct: 166 Y 166
>gi|226497340|ref|NP_001146445.1| uncharacterized protein LOC100280029 [Zea mays]
gi|219887259|gb|ACL54004.1| unknown [Zea mays]
gi|223975439|gb|ACN31907.1| unknown [Zea mays]
gi|413918444|gb|AFW58376.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 168
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 64 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELD 123
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 124 REKDELPAHMTCVSEAEIRKAEKAEREARDLKGTM 158
>gi|425774010|gb|EKV12333.1| hypothetical protein PDIG_44610 [Penicillium digitatum PHI26]
gi|425782493|gb|EKV20399.1| hypothetical protein PDIP_16600 [Penicillium digitatum Pd1]
Length = 172
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLV T+ER++ G+ + D+PRGIFI+RGENV+L+GEVD
Sbjct: 57 VLILRDGRKLIGVLRSWDQFANLVFQDTVERVYAGHLFADVPRGIFIVRGENVLLLGEVD 116
Query: 61 KEKEH--CPQLQQVSVEDIL 78
++E P L + S E++
Sbjct: 117 LDREDDIPPTLTRASFEEVF 136
>gi|448085441|ref|XP_004195860.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359377282|emb|CCE85665.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 19/131 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-----------YGDIPRGIFIIR 49
VLLRDGR L G LR+ DQFANLV+ T+ERI++ ++ YG++ RG+F+IR
Sbjct: 54 FVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDDENSDGTKDKVRRYGEVYRGVFMIR 113
Query: 50 GENVVLMGE--VDKEKEHCPQLQQVSVEDILN--AQRKEQEVKQERSRMLAKRLKERGLS 105
GENVV+MGE +D E +H L+Q+ E + +R ++VK+E+ R +K+L +G
Sbjct: 114 GENVVMMGELDIDTEDDHLQGLEQLPFEVVEKELKERHAKKVKEEKLR--SKKLSSQG-- 169
Query: 106 FVPDLINDDLF 116
FV D + D++
Sbjct: 170 FVNDFVKSDMY 180
>gi|326500218|dbj|BAK06198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503284|dbj|BAJ99267.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 128
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG Y D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 84 REKDELPSHMTCVSEAEIRTAEKAEKEARDLKGTM 118
>gi|255550399|ref|XP_002516250.1| lsm1, putative [Ricinus communis]
gi|223544736|gb|EEF46252.1| lsm1, putative [Ricinus communis]
Length = 128
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN+VL ER+ VG+ Y DI G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLLGILRSFDQFANVVLEGACERVIVGDLYCDILLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRM 94
EKE P + VS +I AQ+ E+E + M
Sbjct: 84 LEKEELPSHMTCVSEAEIKRAQKAEREATDLKGSM 118
>gi|56753874|gb|AAW25134.1| SJCHGC05770 protein [Schistosoma japonicum]
gi|226469900|emb|CAX70231.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
gi|226469902|emb|CAX70232.1| LSM1 homolog, U6 small nuclear RNA associated [Schistosoma
japonicum]
Length = 139
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V LR GR IG+LR +DQF N+VLH +ERIHV N++ D+P+GI +IRGEN++++G+++
Sbjct: 23 VVSLRGGRMFIGFLRIIDQFGNVVLHNAVERIHVENKFCDVPQGILLIRGENIIIIGDLN 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLIN 112
E +L++VS ++I Q+++ ++E ++ A+ RGL +PD ++
Sbjct: 83 PEVNIDEKLERVSEKEIYKLQQEQTAARKELAKKRAELFAMRGLG-LPDFLD 133
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/119 (49%), Positives = 78/119 (65%), Gaps = 4/119 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-NQYGDIPRGIFIIRGENVVLMGEV 59
+V LRDG+ LIG LRS DQFANLVL TIERIH G +Y DI RGI+++RGENVVL+GE+
Sbjct: 25 LVSLRDGKKLIGVLRSYDQFANLVLQDTIERIHDGICKYTDIWRGIYLVRGENVVLLGEI 84
Query: 60 --DKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
DKE E + + S+E + Q++E + K ER + K L +R L F + DD +
Sbjct: 85 DLDKEDEIIKRFEYHSLETVSELQQQEIQTKAERVKKDEKILFDR-LGFSKEGDEDDRY 142
>gi|353237452|emb|CCA69424.1| related to LSM1-Sm-like (Lsm) protein [Piriformospora indica DSM
11827]
Length = 136
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 70/101 (69%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG LRS DQFANLVL TIER H+G + ++P G+ +IRGENVVL+GE+D
Sbjct: 22 LVILRDGRKLIGVLRSYDQFANLVLEGTIERKHLGPYFAELPVGVMVIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKE 101
+ E LQ V + ++ A ++E E +++R A+ L E
Sbjct: 82 LDVEDEVPLQPVPLNELDVAYKRETEFRKKREADKARILFE 122
>gi|359484235|ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
vinifera]
gi|297738539|emb|CBI27784.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDIYCDIPLGLYVIRGENVVLLGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
+KE P + +V +I AQ+ E+E + M
Sbjct: 84 LDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSM 118
>gi|159469406|ref|XP_001692854.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
gi|158277656|gb|EDP03423.1| Sm protein LSm1 [Chlamydomonas reinhardtii]
Length = 126
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 67/97 (69%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L+G LRS DQFANLV+ +ERI VG Q+GDIP G+ IIR ENVVL+G VD
Sbjct: 23 LVVLRDGRKLLGTLRSFDQFANLVIEGAVERIIVGEQFGDIPMGLQIIRAENVVLLGRVD 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+ + L ++ I AQ+ E+E+ + +S + A+
Sbjct: 83 EAIDAPEGLTRIPAAQIKEAQKGEKELNKLKSTIRAR 119
>gi|307109206|gb|EFN57444.1| hypothetical protein CHLNCDRAFT_21126 [Chlorella variabilis]
Length = 112
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 65/94 (69%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
LRDGR +IG L S DQFANLVL ERI VG QY +IP G+ ++RGENVVL+G++D +
Sbjct: 12 LRDGRKIIGTLCSFDQFANLVLSGAKERIIVGQQYSEIPLGLHVVRGENVVLLGQLDAAR 71
Query: 64 EHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
E P L+ V+ I AQR E+E ++ + +LA+
Sbjct: 72 EPPPGLELVTEAAIKQAQRAEREAEKMKGLILAR 105
>gi|149235237|ref|XP_001523497.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452906|gb|EDK47162.1| hypothetical protein LELG_05343 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 186
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 78/128 (60%), Gaps = 16/128 (12%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN--------QYGDIPRGIFIIRGEN 52
VLLRDGR L G LR+ DQFANLVL T ERI++ Q+G+ RG+F++RGEN
Sbjct: 63 FVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLDGDENDGQPKQFGEEYRGVFMVRGEN 122
Query: 53 VVLMGE--VDKEKEHCPQLQQVSVEDILNA--QRKEQEVKQERSRMLAKRLKERGLSFVP 108
VV+MGE +D E H +LQQ+ E+ + EQ+VKQE+ R K L ++GL V
Sbjct: 123 VVMMGELDIDTEDGHLEKLQQIPFEEAEKGLKLKHEQKVKQEKRR--TKTLLKQGL--VN 178
Query: 109 DLINDDLF 116
D DL+
Sbjct: 179 DFYKSDLY 186
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L+G LRS DQFANLVL TIER + G YG++ RG+F+IRGENVVL+GE+D
Sbjct: 22 LVVLRDGRKLVGVLRSYDQFANLVLEDTIERFYHGQNYGEVRRGVFLIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKE-RGLS 105
+ E LQ V I ++E E +++R A L E +G S
Sbjct: 82 LDVEDQVPLQVVPQNMIAPVHKEEFEKRKQRDATKATILHEQKGFS 127
>gi|115458610|ref|NP_001052905.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|113564476|dbj|BAF14819.1| Os04g0445800 [Oryza sativa Japonica Group]
gi|218194932|gb|EEC77359.1| hypothetical protein OsI_16058 [Oryza sativa Indica Group]
gi|222628944|gb|EEE61076.1| hypothetical protein OsJ_14946 [Oryza sativa Japonica Group]
Length = 129
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG Y D+P G+++IRGENVVL+GE+D
Sbjct: 25 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELD 84
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 85 REKDELPAHMTCVSEAEIRKAEKAEREARDLKGSM 119
>gi|281210655|gb|EFA84821.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 132
Score = 94.7 bits (234), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ IG +R+ DQFAN++L TIERI+VG++Y D G+F IRG+ VV++GE+D
Sbjct: 17 IVVLRDGKKFIGVMRTFDQFANIILQDTIERIYVGDKYSDKHLGVFFIRGDTVVILGEID 76
Query: 61 KEKE-HCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE +L +VS E+I AQ+ E+E Q+ + + + E GL+ + ++N D F
Sbjct: 77 PDKEVKEKKLTKVSWEEINLAQQAEREKLQQMEQTKRRIMTESGLT-IDSILNLDDF 132
>gi|326475987|gb|EGD99996.1| U6 snRNA-associated Sm-like protein LSm1 [Trichophyton tonsurans
CBS 112818]
gi|326485013|gb|EGE09023.1| small nuclear ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 202
Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFAN+VL TIER++ N Y DIPRG+F++RGENV+L+GE+D
Sbjct: 87 VLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGEID 146
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K + P+ +Q ++L +++ +E ++ + + + L+ L F P+ + LF
Sbjct: 147 LDKDDDIPEPYRQAPASEVLKLKKQAEERRKRKDKKRSSHLQ--ALGFEPEHSGEILF 202
>gi|226509658|ref|NP_001146909.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|195605102|gb|ACG24381.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGGQYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQLQQVSVE-DILNAQRKEQEVKQERSRM 94
EK+ P +E +I A++ E+E + + M
Sbjct: 84 HEKDELPAHMTCVLEAEIRKAEKAEREARDLKGTM 118
>gi|327303990|ref|XP_003236687.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326462029|gb|EGD87482.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 201
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFAN+VL TIER++ N Y DIPRG+F++RGENV+L+GE+D
Sbjct: 86 VLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGEID 145
Query: 61 KEK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+K + P+ +Q ++L +++ +E ++ + + + L+ L F P+ + LF
Sbjct: 146 LDKDDDIPEPYRQAPASEVLKLKKQAEERRKRKDKKRSTHLQ--ALGFEPEHSGEILF 201
>gi|357149636|ref|XP_003575180.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
[Brachypodium distachyon]
Length = 128
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG Y D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
+EK+ P + VS +I A++ E+E + + M
Sbjct: 84 REKDELPAHMTCVSEAEIRRAEKAEREARDLKGSM 118
>gi|414587042|tpg|DAA37613.1| TPA: small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 128
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCPQLQQVSVE-DILNAQRKEQEVKQERSRM 94
EK+ P +E +I A++ E+E + + M
Sbjct: 84 HEKDELPAHMTCVLEAEIRKAEKAEREARDLKGTM 118
>gi|242810005|ref|XP_002485492.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218716117|gb|EED15539.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 166
Score = 94.4 bits (233), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 80/118 (67%), Gaps = 4/118 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ERI+ GN Y + G++++RGENV+L+GE+D
Sbjct: 51 VLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVLLLGEID 110
Query: 61 KEKE-HCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE P+ L Q SV+++ + KE+E ++ + + +L+ G F P+ + LF
Sbjct: 111 LDKEDDLPESLNQASVKEVRELKAKEEEERKRKDKKSVGKLQNHG--FEPEHSGEVLF 166
>gi|168038612|ref|XP_001771794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676925|gb|EDQ63402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 127
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ +IG LRS DQFAN+VL +ERI VG Y D+P G++IIRGENVVL+GE+D
Sbjct: 23 LVILRDGKKIIGILRSFDQFANVVLEGALERITVGELYCDLPLGLYIIRGENVVLIGELD 82
Query: 61 KEKEHCPQLQ-QVSVEDILNAQRKEQEVKQERSRM 94
+E P +V+ +I AQ+ E++ + + M
Sbjct: 83 LGREELPSFMVRVTPTEIKQAQKAEKDATELKGTM 117
>gi|448080960|ref|XP_004194769.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
gi|359376191|emb|CCE86773.1| Piso0_005285 [Millerozyma farinosa CBS 7064]
Length = 180
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 19/131 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-----------YGDIPRGIFIIR 49
VLLRDGR L G LR+ DQFANLV+ T+ERI++ ++ YG++ RG+F+IR
Sbjct: 54 FVLLRDGRNLFGVLRTFDQFANLVIQDTVERIYLDDENSDGTKDKVRRYGEVYRGVFMIR 113
Query: 50 GENVVLMGE--VDKEKEHCPQLQQVSVEDILN--AQRKEQEVKQERSRMLAKRLKERGLS 105
GENVV+MGE +D E +H L+Q+ E + +R ++VK+E+ R +K+L +G
Sbjct: 114 GENVVMMGELDIDTEDDHLQGLEQLPFEVVEKELKERHARKVKEEKLR--SKKLLSQG-- 169
Query: 106 FVPDLINDDLF 116
FV D + D++
Sbjct: 170 FVNDFVKSDMY 180
>gi|398411868|ref|XP_003857268.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici IPO323]
gi|339477153|gb|EGP92244.1| hypothetical protein MYCGRDRAFT_32304 [Zymoseptoria tritici IPO323]
Length = 132
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGR LIG LRS DQF NLVL TIER V N Y DI RG+F++RGENV+L+GE+D
Sbjct: 18 VSLRDGRKLIGVLRSWDQFGNLVLQDTIERFFVKNLYADIERGLFLVRGENVLLLGEIDL 77
Query: 62 EK-EHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+K ++ P + VE + ++ E + Q+ ++ K+L E G
Sbjct: 78 DKDDYVPAPYEAAPVETVFAMKKAEDKENQKTNQSRQKKLAELGF 122
>gi|303315247|ref|XP_003067631.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240107301|gb|EER25486.1| U6 snRNA-associated Sm-like protein LSm1, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320035563|gb|EFW17504.1| small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 209
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ER++ GN YG+ PRG++++RGENV+L+GE+D
Sbjct: 94 VLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGEID 153
Query: 61 KEKE-HCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+KE P+ +Q +++L +++E ++ + +L+ G
Sbjct: 154 LDKEDDIPEPYRQAPYKEVLEMKQREDSERKRTDKRRGGKLQTLGF 199
>gi|392868828|gb|EAS34628.2| small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 209
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ER++ GN YG+ PRG++++RGENV+L+GE+D
Sbjct: 94 VLILRDGRKLIGVLRSWDQFANLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGEID 153
Query: 61 KEKE-HCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+KE P+ +Q +++L +++E ++ + +L+ G
Sbjct: 154 LDKEDDIPEPYRQAPYKEVLEMKQREDSERKRTDKRRGGKLQTLGF 199
>gi|260949273|ref|XP_002618933.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC 42720]
gi|238846505|gb|EEQ35969.1| hypothetical protein CLUG_00092 [Clavispora lusitaniae ATCC 42720]
Length = 149
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 78/125 (62%), Gaps = 11/125 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN-------QYGDIPRGIFIIRGENV 53
VLLRDGR + G LR+ DQFANLVL T ERI++ ++ ++PRG+F++RGENV
Sbjct: 27 FVLLRDGRNMSGILRTFDQFANLVLQDTFERIYLPKLDQNSPVRFAEVPRGVFMVRGENV 86
Query: 54 VLMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLI 111
V++GE +D+E +H ++QQ+ E + QE + + ++ K+ +RGL + D +
Sbjct: 87 VMLGELDIDREDDHLAEMQQIPFEQAEKEWKGIQENRIKNEKVKTKKYLKRGL--IHDFV 144
Query: 112 NDDLF 116
DL+
Sbjct: 145 KSDLY 149
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 4/98 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
++LLRDGR L+G LRS DQFAN VL ER+ VG+ Y DIP G+++IRGENVVL+GE+D
Sbjct: 24 LILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGEMD 83
Query: 61 KEKEHC-PQLQQVSVEDI---LNAQRKEQEVKQERSRM 94
E+E P + +V E+I + AQ+ E++ + + M
Sbjct: 84 VEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGTM 121
>gi|358337817|dbj|GAA36813.2| U6 snRNA-associated Sm-like protein LSm1 [Clonorchis sinensis]
Length = 137
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV L GR G+LR +DQF N+VLH+ ERIHV ++ DIP+GI +IRGEN++L+GEVD
Sbjct: 21 MVYLHGGRVYFGFLRIIDQFGNVVLHQAFERIHVDKKFCDIPQGILMIRGENIILIGEVD 80
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF--VPDLINDD 114
+ QL+ VS ++I Q + ++ S+ A+ RGL DL+ DD
Sbjct: 81 ENCNIEEQLELVSEKEIYALQAERTAARKALSKRRAQLFAARGLGLPDPSDLVFDD 136
>gi|255723090|ref|XP_002546479.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
gi|240130996|gb|EER30558.1| hypothetical protein CTRG_05957 [Candida tropicalis MYA-3404]
Length = 168
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 10/124 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ------YGDIPRGIFIIRGENVV 54
VLLRDGR L G LR+ DQFANLVL T ERI++ + +G++ RG+F++RGENVV
Sbjct: 47 FVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLQEEGEAPARFGEVYRGVFMVRGENVV 106
Query: 55 LMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLIN 112
+MGE +D+E +H +LQQ+S E + + + + + + ++ K L + GL + D
Sbjct: 107 MMGELDIDREDDHLEKLQQISFEQAEHELKMKHQTRIKEEKVKTKNLLQTGL--INDFYK 164
Query: 113 DDLF 116
D++
Sbjct: 165 TDMY 168
>gi|154291173|ref|XP_001546172.1| hypothetical protein BC1G_15358 [Botryotinia fuckeliana B05.10]
gi|347441882|emb|CCD34803.1| hypothetical protein [Botryotinia fuckeliana]
Length = 181
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 75/121 (61%), Gaps = 19/121 (15%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-------------YGDIPRGIFI 47
M+ LRDGR LIG LRS DQFAN+VL TIERI + Y DIPRG+F+
Sbjct: 52 MISLRDGRKLIGILRSWDQFANIVLQSTIERIFIAPPPSSSPQGATQPGLYADIPRGLFL 111
Query: 48 IRGENVVLMGEV--DKEKEHCPQLQQVSVEDI--LNAQRKEQEVKQERSRMLAKRLKERG 103
+RGENV+L+GE+ DK+ E P ++ E + L+ +R+ E K++++R+ ++L E G
Sbjct: 112 VRGENVLLLGEIDLDKDDEAPPGYEKADAEVVNRLDKERRAMEAKRDKNRL--RKLAELG 169
Query: 104 L 104
Sbjct: 170 F 170
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 67/104 (64%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR L+G LRS DQFANLVL + ERI G +Y D+ +G+F+IRGENVVL+GE+D
Sbjct: 22 LIVLRDGRKLVGVLRSYDQFANLVLEDSYERIFHGLEYADVWKGVFVIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+ E L QV ++ IL E E +++ A L E G
Sbjct: 82 LDVEDEVPLVQVPLQQILPLHNAENETRKKNEVEKANILMEHGF 125
>gi|224119520|ref|XP_002331181.1| predicted protein [Populus trichocarpa]
gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222873302|gb|EEF10433.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER+ VG+ Y DI G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDLYCDIHLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + +VS +I AQ+ E+E + M
Sbjct: 84 LEREELPPHMTRVSEAEIRRAQKAEREATDLKGTM 118
>gi|224073612|ref|XP_002304120.1| predicted protein [Populus trichocarpa]
gi|222841552|gb|EEE79099.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G LRS DQFAN VL ER VG+ Y DI G+++IRGENVVL+GE+D
Sbjct: 24 LVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDLYCDIHLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRM 94
E+E P + +VS +I AQ+ E+E + M
Sbjct: 84 LEREELPPHMTRVSEAEIKRAQKAEREATDLKGTM 118
>gi|303283710|ref|XP_003061146.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457497|gb|EEH54796.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 103
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDG ++G LRS DQFAN+VL +ERI V Y DIP G++I+RGENVVLMG VD
Sbjct: 3 LVLLRDGSKILGTLRSFDQFANIVLEGAVERIIVNKSYSDIPLGLYIVRGENVVLMGGVD 62
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRML 95
+ KE L VS ++I +A+ E+ + + ML
Sbjct: 63 ESKE-TEGLTMVSNDEIKHARDAEKAAENLKGSML 96
>gi|126138906|ref|XP_001385976.1| hypothetical protein PICST_68190 [Scheffersomyces stipitis CBS
6054]
gi|126093254|gb|ABN67947.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 166
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 24/136 (17%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN----------------QYGDIPRG 44
VLLRDGR L G LR+ DQFANLVL T+ERI++ N ++G RG
Sbjct: 35 FVLLRDGRNLFGILRTFDQFANLVLQDTVERIYLDNDKKQPEPQEDGSIEQKRFGQAYRG 94
Query: 45 IFIIRGENVVLMGE--VDKEKEHCPQLQQVSVEDILNAQRKE--QEVKQERSRMLAKRLK 100
IF++RGENVV+MGE +D+E +H +LQQ+ E+ K + ++ E++R +K+
Sbjct: 95 IFMVRGENVVMMGELDIDREDDHLAELQQIPFEEAEKELEKSHAETIRNEKTR--SKQFL 152
Query: 101 ERGLSFVPDLINDDLF 116
+GL + D + DL+
Sbjct: 153 AKGL--INDFVKSDLY 166
>gi|255079102|ref|XP_002503131.1| like-sm protein [Micromonas sp. RCC299]
gi|226518397|gb|ACO64389.1| like-sm protein [Micromonas sp. RCC299]
Length = 127
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG +IG+LRS DQFAN+VL ERI VG + DIP G++I+RGENVVLMG++D
Sbjct: 26 LVVLRDGSKIIGFLRSFDQFANIVLENACERIIVGTSFSDIPLGLYIVRGENVVLMGDID 85
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+ E L +VS E+I + E+ + + ML +
Sbjct: 86 ETIE-TEGLTEVSNEEIKREREAEKAADKFKGEMLKR 121
>gi|384249031|gb|EIE22514.1| hypothetical protein COCSUDRAFT_83471 [Coccomyxa subellipsoidea
C-169]
Length = 125
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V LRDGR ++G LRS DQFANLVL +ERI VG Y + P G++++RGENVVL+G++D
Sbjct: 22 LVQLRDGRKIVGILRSFDQFANLVLEGAVERIIVGILYAEDPLGLYVVRGENVVLLGDID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+ LQ+VS+ +I QR E+E ++ + M A+
Sbjct: 82 ASHDPPAILQKVSLAEIRQIQRDEKEQEKIKKTMKAR 118
>gi|363753170|ref|XP_003646801.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890437|gb|AET39984.1| hypothetical protein Ecym_5215 [Eremothecium cymbalariae
DBVPG#7215]
Length = 152
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 76/121 (62%), Gaps = 8/121 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ NQY + RG+F++RGENVV++GE
Sbjct: 35 FVLLRDGRMLFGVLRTFDQYANLILQHCVERIYITEENQYAECERGVFMVRGENVVMLGE 94
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERG-LSFVPDLINDDL 115
+D +KE P +++V ED AQR + +E+ ++ ++ KE + D D+
Sbjct: 95 IDIDKEDKPLELMEKVPFED---AQRFKDRYNEEKFKIETQKTKELARFGLINDFHKSDM 151
Query: 116 F 116
+
Sbjct: 152 Y 152
>gi|452847377|gb|EME49309.1| hypothetical protein DOTSEDRAFT_68172 [Dothistroma septosporum
NZE10]
Length = 164
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
LRDGR LIG LRS DQF NLVL T+ER+ V N Y DI RG+F++RGENV+L+GE+D +K
Sbjct: 52 LRDGRKLIGVLRSWDQFGNLVLQDTVERLFVQNLYADIERGLFLVRGENVLLLGEIDLDK 111
Query: 64 EHC--PQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+ P + +VE + +++E + +++ + K+L E G
Sbjct: 112 DDYVPPAFELAAVEKVFALKKQENQDRKKTDKSKQKKLAEFGF 154
>gi|45198309|ref|NP_985338.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|44984196|gb|AAS53162.1| AFL212Cp [Ashbya gossypii ATCC 10895]
gi|374108566|gb|AEY97472.1| FAFL212Cp [Ashbya gossypii FDAG1]
Length = 152
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ QYG+ RG+F++RGENVV++GE
Sbjct: 35 FVLLRDGRMLFGVLRTFDQYANLILQHCVERIYIPEEGQYGECERGVFMVRGENVVMLGE 94
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P QL++V E+ + + E K + +K L GL + D D++
Sbjct: 95 VDIDKEDKPLEQLERVPFEEAARYRDGQNETKFKVETQKSKELARYGL--IHDFNKSDMY 152
>gi|327349130|gb|EGE77987.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 239
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ER++ GN + DI RGI++IRGENV+L+GEVD
Sbjct: 124 VLVLRDGRKLIGVLRSWDQFANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLGEVD 183
Query: 61 KEKE-HCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+KE P +Q E++ +++E +++ + +L+ G
Sbjct: 184 LDKEDDIPTGYRQAPFEEVFALKKQEDNERKKGDKRRNTKLQTLGF 229
>gi|294655141|ref|XP_457238.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
gi|199429721|emb|CAG85236.2| DEHA2B06402p [Debaryomyces hansenii CBS767]
Length = 172
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 12/88 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN----------QYGDIPRGIFIIRG 50
VLLRDGR L G LR+ DQFANLVL TIERI++ + ++G+ RG+F++RG
Sbjct: 47 FVLLRDGRNLFGILRTFDQFANLVLQDTIERIYLDSDDETDDSRPKKFGEAYRGVFMVRG 106
Query: 51 ENVVLMGE--VDKEKEHCPQLQQVSVED 76
ENVV+MGE +D+E +H +LQQVS E+
Sbjct: 107 ENVVMMGELDIDREDDHLEELQQVSFEE 134
>gi|452988559|gb|EME88314.1| hypothetical protein MYCFIDRAFT_126773 [Pseudocercospora fijiensis
CIRAD86]
Length = 144
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 68/92 (73%), Gaps = 3/92 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDGR LIG LRS DQF NLVL TIER+ V + Y DI RG+F++RGENV+++GE+D
Sbjct: 29 MVVLRDGRKLIGVLRSWDQFGNLVLQDTIERLFVHDLYADIERGLFLVRGENVLILGEID 88
Query: 61 KEK-EHCPQLQQVSVEDILNAQRKEQEVKQER 91
+K ++ P+ Q++ + + +K+Q+ QER
Sbjct: 89 LDKDDYIPEPYQLAPAEKVFELKKQQD--QER 118
>gi|391347595|ref|XP_003748045.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform 1
[Metaseiulus occidentalis]
gi|391347597|ref|XP_003748046.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform 2
[Metaseiulus occidentalis]
Length = 146
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LR+ + LIG LR++DQF NLVL TIER HVG YGDIPRG+ ++R ENV L+GE D
Sbjct: 29 MVVLRNDQILIGKLRAIDQFNNLVLQYTIERPHVGKYYGDIPRGVLMVRAENVQLLGEYD 88
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
++ L V +E I+ +++ +E + + L+E+GL
Sbjct: 89 ADRAQHVGLVNVGIEKIIELKQEVEEKSRVERETRRRFLREQGL 132
>gi|238880277|gb|EEQ43915.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 167
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 10/113 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ------YGDIPRGIFIIRGENVV 54
VLL+DGR L G LR+ DQFANLVL T+ERI++G + + + RG+F++RGENVV
Sbjct: 46 FVLLKDGRNLFGILRTFDQFANLVLQDTLERIYLGEEGEAPTRFSETYRGVFMVRGENVV 105
Query: 55 LMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERS-RMLAKRLKERGL 104
++GE +D E +H +L+QV E + + KEQ+ K+ R ++ K+L ++GL
Sbjct: 106 MLGEMDIDTEDDHLEKLEQVPFE-VAERELKEQQAKKIREQKVKTKQLLQKGL 157
>gi|299472050|emb|CBN80133.1| Sm-like protein LSm1 [Ectocarpus siliculosus]
Length = 138
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 71/94 (75%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDGR L+G +RS DQF+N+VL T ER V + +GDI G++++RG+ +VLMGE+D
Sbjct: 37 MVVLRDGRHLVGVMRSYDQFSNIVLEDTHERHFVRDIFGDISLGLYLVRGDALVLMGELD 96
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRM 94
+ +E P+L++VS ++I+ AQ++ +++ +++
Sbjct: 97 ETREETPRLRRVSADEIIEAQQEASAEERQDAKL 130
>gi|68478982|ref|XP_716425.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
gi|46438093|gb|EAK97429.1| potential mRNA decapping complex component Lsm1 [Candida albicans
SC5314]
Length = 167
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 76/113 (67%), Gaps = 10/113 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ------YGDIPRGIFIIRGENVV 54
VLL+DGR L G LR+ DQFANLVL T+ERI++G + + + RG+F++RGENVV
Sbjct: 46 FVLLKDGRNLFGILRTFDQFANLVLQDTLERIYLGEEGEAPTRFSETYRGVFMVRGENVV 105
Query: 55 LMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERS-RMLAKRLKERGL 104
++GE +D E +H +L+QV E + + KEQ+ K+ R ++ K+L ++GL
Sbjct: 106 MLGEMDIDTEDDHLEKLEQVPFE-VAQRELKEQQAKKIREQKVKTKQLLQKGL 157
>gi|440801773|gb|ELR22778.1| LSM domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 135
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 73/99 (73%), Gaps = 2/99 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+L+DGR L+G LRS DQ+ANLVL +TIERI+VG QY + G+F++RG+N+VL+G +D
Sbjct: 30 LVVLQDGRKLLGVLRSFDQYANLVLEQTIERIYVGEQYAEKNLGLFLVRGDNIVLLGPID 89
Query: 61 KEKEH-CPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+ +E C + L +V++ +I A++ E+E K+ + + K
Sbjct: 90 ESREELCVKGLTKVTLPEIEAARKAEREAKRAQWELKQK 128
>gi|255716374|ref|XP_002554468.1| KLTH0F06028p [Lachancea thermotolerans]
gi|238935851|emb|CAR24031.1| KLTH0F06028p [Lachancea thermotolerans CBS 6340]
Length = 160
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ N+Y + RG+F++RGENVV++GE
Sbjct: 43 FVLLRDGRMLFGILRTFDQYANLILQHCVERIYITEENKYAECGRGVFMVRGENVVMLGE 102
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
VD ++E P Q++++S E+ +++ + + E K + + GL +
Sbjct: 103 VDIDREDQPLSQMERISFEEASAVKKQRDDARCELESKKGKTMAQHGLIY 152
>gi|302502174|ref|XP_003013078.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
gi|291176640|gb|EFE32438.1| small nuclear ribonucleoprotein Lsm8, putative [Arthroderma
benhamiae CBS 112371]
Length = 221
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFAN+VL TIER++ N Y DIPRG+F++RGENV+L+GE+
Sbjct: 86 VLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGEIV 145
Query: 61 KEKEHCP 67
++ CP
Sbjct: 146 RQ---CP 149
>gi|66814660|ref|XP_641509.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74856091|sp|Q54W83.1|LSM1_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm1
gi|60469541|gb|EAL67532.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 129
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR IG +R+ DQFAN+VL TIERI+VG+ Y D G+F IRG+NVV++GE+D
Sbjct: 14 IVVLRDGRKFIGIMRTFDQFANIVLQDTIERIYVGDCYSDKNLGLFFIRGDNVVILGEID 73
Query: 61 KEKE-HCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
+KE +L+++S ++I A E+ K+E ++ + + E GL+ + ++N D F
Sbjct: 74 PDKEVQEKKLKKISWDEITKAAALEKIKKEEEEQLKRRIMTESGLT-IDSILNIDDF 129
>gi|414587041|tpg|DAA37612.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 120
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+D
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELD 83
Query: 61 KEKEHCP 67
EK+ P
Sbjct: 84 HEKDELP 90
>gi|226286851|gb|EEH42364.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 138
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 72/104 (69%), Gaps = 3/104 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ERI+ G+ + D+ RGI+++RGENV+L+GE+D
Sbjct: 28 VLVLRDGRKLIGVLRSWDQFANLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEID 87
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+ +Q S +++ +++E E +++ + + +L+ G
Sbjct: 88 ---DIPSGYRQASYDEVFALKKREDEQRKKGDKRRSNKLQALGF 128
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 68/102 (66%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ERI+ GN + + G+F+IRGENVVL+GE+D
Sbjct: 22 LVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAENWHGLFLIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
++E L QV + +++ ++K+ER A L ++
Sbjct: 82 LDREDDIPLTQVDYHLLEPYHKQDADMKKEREDAKAHVLYQQ 123
>gi|330842218|ref|XP_003293079.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
gi|325076610|gb|EGC30382.1| hypothetical protein DICPUDRAFT_157882 [Dictyostelium purpureum]
Length = 131
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 80/117 (68%), Gaps = 2/117 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR IG +R+ DQFAN+VL TIERI+VG+ Y D G+F IRG+NVV++GE+D
Sbjct: 16 IVVLRDGRKFIGMMRTFDQFANIVLQDTIERIYVGDCYSDKNLGVFFIRGDNVVILGEID 75
Query: 61 KEKE-HCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
++E +L++VS ++I A E++ K+E + K + E GL+ + ++N D F
Sbjct: 76 PDREVQEKKLKKVSWDEITKAAALEKQKKEEEELLKRKIMTESGLT-IDSILNIDDF 131
>gi|302661794|ref|XP_003022560.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
gi|291186512|gb|EFE41942.1| small nuclear ribonucleoprotein Lsm8, putative [Trichophyton
verrucosum HKI 0517]
Length = 221
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 54/67 (80%), Gaps = 3/67 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFAN+VL TIER++ N Y DIPRG+F++RGENV+L+GE+
Sbjct: 86 VLVLRDGRKLIGVLRSWDQFANIVLQDTIERLYAENLYADIPRGVFLVRGENVLLLGEIV 145
Query: 61 KEKEHCP 67
++ CP
Sbjct: 146 RQ---CP 149
>gi|403415254|emb|CCM01954.1| predicted protein [Fibroporia radiculosa]
Length = 116
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 70/102 (68%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ERI + + ++ RG+F+IRGENVVL+GEVD
Sbjct: 2 LVVLRDGRKLQGVLRSYDQFANLVLEDTVERIFCQDVFAEVWRGLFLIRGENVVLLGEVD 61
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
++E L+QV+ +++ +E K++R A+ L E+
Sbjct: 62 LDQEDDVPLRQVAWDELEPYHSQEILAKKKREESKAQVLYEQ 103
>gi|409051525|gb|EKM61001.1| hypothetical protein PHACADRAFT_247289 [Phanerochaete carnosa
HHB-10118-sp]
Length = 116
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 69/102 (67%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ERI+ + Y ++ RG+++IRGENVVL+GE+D
Sbjct: 2 LVVLRDGRKLHGVLRSYDQFANLVLEDTVERIYHQDVYAEMKRGLYLIRGENVVLLGEID 61
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
++E L+QV E + +K+ K+ R + A L E+
Sbjct: 62 LDQEDDVPLKQVDWETLEPYHQKDIADKKARDELKANVLFEK 103
>gi|146422932|ref|XP_001487400.1| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ---------YGDIPRGIFIIRGE 51
VL+RDGR L G LR+ DQFANLVL +ERI++ ++ Y + RG+F+IRGE
Sbjct: 33 FVLMRDGRKLFGILRTFDQFANLVLQDAVERIYLNDENDDNLSPQRYSEAYRGVFMIRGE 92
Query: 52 NVVLMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPD 109
NVV+MGE +D E +H +LQ++ + + Q K + +K L +GL + D
Sbjct: 93 NVVMMGELDIDTEDDHLEKLQKIPFPEAETELKARQAAKIKTELAKSKTLLAKGL--IND 150
Query: 110 LINDDLF 116
+ DL+
Sbjct: 151 FVKSDLY 157
>gi|190344900|gb|EDK36679.2| hypothetical protein PGUG_00777 [Meyerozyma guilliermondii ATCC
6260]
Length = 157
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ---------YGDIPRGIFIIRGE 51
VL+RDGR L G LR+ DQFANLVL +ERI++ ++ Y + RG+F+IRGE
Sbjct: 33 FVLMRDGRKLFGILRTFDQFANLVLQDAVERIYLNDENDDNSSPQRYSEAYRGVFMIRGE 92
Query: 52 NVVLMGE--VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPD 109
NVV+MGE +D E +H +LQ++ + + Q K + +K L +GL + D
Sbjct: 93 NVVMMGELDIDTEDDHLEKLQKIPFPEAETELKARQAAKIKTELAKSKTLLAKGL--IND 150
Query: 110 LINDDLF 116
+ DL+
Sbjct: 151 FVKSDLY 157
>gi|38344547|emb|CAD40963.2| OSJNBa0027P08.15 [Oryza sativa Japonica Group]
gi|116310232|emb|CAH67241.1| OSIGBa0140O07.9 [Oryza sativa Indica Group]
Length = 136
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV- 59
+VLLRDGR L+G L S DQFAN+VL ER+ VG Y D+P G+++IRGENVVL+GE+
Sbjct: 25 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGELYCDVPLGLYVIRGENVVLIGELV 84
Query: 60 ------DKEKEHCP-QLQQVSVEDILNAQRKEQEVKQERSRM 94
D+EK+ P + VS +I A++ E+E + + M
Sbjct: 85 WFWIEQDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGSM 126
>gi|354545754|emb|CCE42482.1| hypothetical protein CPAR2_201250 [Candida parapsilosis]
Length = 164
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 9/113 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---GNQYGDIPRGIFIIRGENVVLMG 57
VLL+DGR G LR+ DQFANLVL T ERI+V ++G+I RG+FI+RGENVV+MG
Sbjct: 46 FVLLKDGRNFFGILRTFDQFANLVLQDTFERIYVEGEPKKFGEIYRGVFIVRGENVVMMG 105
Query: 58 E--VDKEKEHCPQLQQVSVEDILNAQRK--EQEVKQERSRMLAKRLKERGLSF 106
E +D+E +H LQQ+ E Q++ Q +K+E ++ K E+GL +
Sbjct: 106 ELDIDREDDHLENLQQIPFEQAEQEQKQQHAQLIKEENTK--KKTFFEKGLIY 156
>gi|320580108|gb|EFW94331.1| Alpha 4 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 384
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-GNQYGDIPRG-IFIIRGENVVLMGE 58
VLLRDGR++IG LR+ DQFANLV+H +ERI++ G++YG+ IF+IRGENVV+MGE
Sbjct: 34 FVLLRDGRSVIGVLRTFDQFANLVIHDGVERIYLDGSRYGESTEPQIFLIRGENVVMMGE 93
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPD 109
+D +KE P +L ++ +K Q ER + K+L+ RG PD
Sbjct: 94 LDIDKEDEPLEKLTRIDYGAAFGEWKKAQTEIVERHTIEDKQLRSRG-HLTPD 145
>gi|452820116|gb|EME27163.1| U6 snRNA-associated Sm-like protein LSm1 [Galdieria sulphuraria]
Length = 153
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 64/104 (61%), Gaps = 6/104 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VL RDGR ++G LRS DQ+ANLVL T ER + + Y D P G+FIIRGENV L+GEVD
Sbjct: 43 LVLQRDGRYIVGLLRSYDQYANLVLENTFERFVLNDSYCDEPLGVFIIRGENVALLGEVD 102
Query: 61 KEKE--HCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
EKE L VS+ED +K K++ ++ L ER
Sbjct: 103 GEKESQWLSHLHTVSLEDT----KKTIRGKRQATKALLHSQPER 142
>gi|384487468|gb|EIE79648.1| U6 snRNA-associated Sm-like protein LSm1 [Rhizopus delemar RA
99-880]
Length = 68
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV+LRDGR LIG LRS DQF VL TIERI+VG YGDIPRGIF+IRGENVVL+GE+
Sbjct: 1 MVVLRDGRKLIGTLRSFDQF---VLQDTIERIYVGQCYGDIPRGIFLIRGENVVLLGEIV 57
Query: 61 KE 62
E
Sbjct: 58 NE 59
>gi|444319832|ref|XP_004180573.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
gi|387513615|emb|CCH61054.1| hypothetical protein TBLA_0D05620 [Tetrapisispora blattae CBS 6284]
Length = 156
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ NQY + RG+F+IRGENVV++GE
Sbjct: 39 FVLLRDGRMLFGVLRTFDQYANLILQHCVERIYLTKENQYSEESRGVFMIRGENVVMLGE 98
Query: 59 VDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKE 101
VD +KE P L+ + +AQ+ + + R ++ K+ +E
Sbjct: 99 VDIDKEDAP-LENMEFIPWRDAQKIREAQNENRFKLEVKKGRE 140
>gi|403217847|emb|CCK72340.1| hypothetical protein KNAG_0J02610 [Kazachstania naganishii CBS
8797]
Length = 183
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 16/124 (12%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
VLLRDG+ L G LR+ DQ+ANL+L +ERI++ +Y + RG+F++RGENVV++GEVD
Sbjct: 68 FVLLRDGKLLFGVLRTFDQYANLLLQHCVERIYLEGKYAEEDRGVFMVRGENVVMLGEVD 127
Query: 61 KEK--------EHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLIN 112
+K E P + S + NAQR +QE + K GLS D
Sbjct: 128 IDKEDEPLTLLERVPFSEAESTRTLANAQRFKQETDK------TKEYARYGLSH--DFYK 179
Query: 113 DDLF 116
D++
Sbjct: 180 SDMY 183
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ERI+ GN + + G+F+IRGENVVL+GEVD
Sbjct: 22 LVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAEHWHGLFLIRGENVVLLGEVD 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
++E L+QV + + R + K+ AK L E+
Sbjct: 82 LDQEDDVPLRQVDYQVLDPYHRNDIAQKKLHDEAKAKILYEQ 123
>gi|366998974|ref|XP_003684223.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
gi|357522519|emb|CCE61789.1| hypothetical protein TPHA_0B01170 [Tetrapisispora phaffii CBS 4417]
Length = 157
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RG+F++RGENVV++GE
Sbjct: 40 FVLLRDGRILFGVLRTFDQYANLILQYCVERIYFTEENKYAEELRGVFMVRGENVVMLGE 99
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++ ++ L Q+++ + K + +K + GL V D D++
Sbjct: 100 VDIDKEDKPLEMMEKIPFKEALKIQKEQNQQKCKLETQKSKDMAAYGL--VHDFHKSDMY 157
>gi|116204657|ref|XP_001228139.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
gi|88176340|gb|EAQ83808.1| hypothetical protein CHGG_10212 [Chaetomium globosum CBS 148.51]
Length = 182
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 15/112 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG---------NQYGDIPRGIFIIRGE 51
M+ LRDGR L+G LRS DQFANLVL T ERI V Y D+ RG+F++RGE
Sbjct: 58 MLALRDGRKLVGILRSWDQFANLVLQSTKERIFVPPGTAPDQVRGLYADVDRGLFLVRGE 117
Query: 52 NVVLMGEV--DKEKEHCPQLQQVSVEDI--LNAQRKEQEVKQERS--RMLAK 97
NV+L+GE+ DKE + P VE + L QRK+Q+ +E++ +MLAK
Sbjct: 118 NVLLLGEIDLDKEDDAPPGYDLADVELVQSLAKQRKQQDKIKEKTKVKMLAK 169
>gi|47201346|emb|CAF87885.1| unnamed protein product [Tetraodon nigroviridis]
Length = 139
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 45/130 (34%)
Query: 22 NLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV---------------------- 59
NLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 1 NLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEIVSGRAAARAHTHTHTHTHTHTH 60
Query: 60 -----------------------DKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLA 96
D +K LQQVS+E+IL QR EQ+ KQE ++
Sbjct: 61 THTHTDHQLSCEPCFSNLSNSLQDLDKPCDAFLQQVSIEEILEEQRMEQQAKQETEKVKV 120
Query: 97 KRLKERGLSF 106
+ LK+RGLS
Sbjct: 121 QALKDRGLSL 130
>gi|389638316|ref|XP_003716791.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
gi|351642610|gb|EHA50472.1| hypothetical protein MGG_03195 [Magnaporthe oryzae 70-15]
Length = 176
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 16/116 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--------YGDIPRGIFIIRGENV 53
+ LRDGR L G LRS DQFANLVL T+ER+ V Y DI RG+F++RGENV
Sbjct: 54 IALRDGRKLTGVLRSWDQFANLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENV 113
Query: 54 VLMGEVDKEKEHCP-----QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+L+GE+D +K+ P + + VE +L A++ E + K E+SR+ K+L G
Sbjct: 114 LLLGEIDLDKDDDPPAGYDKAELQVVESLLKARKAEDKAK-EKSRL--KKLASLGF 166
>gi|367035444|ref|XP_003667004.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
gi|347014277|gb|AEO61759.1| hypothetical protein MYCTH_57908 [Myceliophthora thermophila ATCC
42464]
Length = 159
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-----NQ----YGDIPRGIFIIRGE 51
MV LRDGR L+G LRS DQFANLVL T ERI V NQ Y DI RG+F++RGE
Sbjct: 35 MVALRDGRKLLGILRSWDQFANLVLQSTKERIFVAPGTVPNQPRGLYADIDRGLFLVRGE 94
Query: 52 NVVLMGEVDKEKEHCP----QLQQVSVEDILNAQRKEQE 86
NV+L+GE+D +KE P L + L QRK+Q+
Sbjct: 95 NVLLLGEIDLDKEDDPPAGYDLADAELVQNLAKQRKQQD 133
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 65/102 (63%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ER++ N + + GIF+IRGENVVL+GE+D
Sbjct: 22 LVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFAENWHGIFVIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
+KE L QV + + R K+ R + A+ L E+
Sbjct: 82 LDKEDDIPLNQVPYTILESYHRSNITSKKYRDDIKAQILYEQ 123
>gi|392571535|gb|EIW64707.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 136
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VLLRDGR L G LRS DQFANLVL T+ERI+ + + ++ RG+F+IRGENVVL+GE+D
Sbjct: 22 LVLLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEMWRGLFLIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
++E L+QV +L A K Q++ ++ R AK
Sbjct: 82 LDQEDEVPLRQVEWS-VLEAYHK-QDIADKKVREEAK 116
>gi|6322337|ref|NP_012411.1| Lsm1p [Saccharomyces cerevisiae S288c]
gi|1353009|sp|P47017.1|LSM1_YEAST RecName: Full=Sm-like protein LSm1; AltName: Full=SPB8 protein
gi|1008320|emb|CAA89419.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270504|gb|AAS56633.1| YJL124C [Saccharomyces cerevisiae]
gi|151945004|gb|EDN63259.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409383|gb|EDV12648.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256272133|gb|EEU07133.1| Lsm1p [Saccharomyces cerevisiae JAY291]
gi|285812780|tpg|DAA08678.1| TPA: Lsm1p [Saccharomyces cerevisiae S288c]
gi|323304441|gb|EGA58212.1| Lsm1p [Saccharomyces cerevisiae FostersB]
gi|349579079|dbj|GAA24242.1| K7_Lsm1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392298642|gb|EIW09739.1| Lsm1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 172
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++ ++ ++K E + + K++ G+ V D D++
Sbjct: 115 VDIDKEDQPLEAMERIPFKEAWLTKQKNDEKRFKEETHKGKKMARHGI--VYDFHKSDMY 172
>gi|290771110|emb|CAY80661.2| Lsm1p [Saccharomyces cerevisiae EC1118]
gi|323347940|gb|EGA82199.1| Lsm1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764929|gb|EHN06447.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 172
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
+VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 VVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++ ++ ++K E + + K++ G+ V D D++
Sbjct: 115 VDIDKEDQPLEAMERIPFKEAWLTKQKNDEKRFKEETHKGKKMARHGI--VYDFHKSDMY 172
>gi|254581194|ref|XP_002496582.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
gi|238939474|emb|CAR27649.1| ZYRO0D03432p [Zygosaccharomyces rouxii]
Length = 185
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDG+ L G LR+ DQ+ANL+L +ERI+ N+Y + RG+F++RGENVV++GE
Sbjct: 68 FVLLRDGKMLFGVLRTFDQYANLILEHCVERIYFTEKNKYAEEYRGLFMVRGENVVMLGE 127
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++ D L A++ E + ++ + K+L G+ + D D++
Sbjct: 128 VDIDKEDQPLETMERIPFRDALKAKQIHDESRFKQETIKGKQLARYGILY--DFHKSDMY 185
>gi|156846192|ref|XP_001645984.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
gi|156116655|gb|EDO18126.1| hypothetical protein Kpol_1031p30 [Vanderwaltozyma polyspora DSM
70294]
Length = 177
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RG+F++RGENVV++GE
Sbjct: 60 FVLLRDGRMLFGVLRTFDQYANLILQHCVERIYFTEENKYAEEERGVFMVRGENVVMLGE 119
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++ ++ + E K + K L GL V D D++
Sbjct: 120 VDIDKEDKPLETMERIPFKEAAKTRYNNNEAKFKAETRRGKELAAYGL--VYDFHKSDMY 177
>gi|389751358|gb|EIM92431.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 136
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 69/102 (67%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDG+ L G LRS DQFANLVL +TIERI+ N Y D G+++IRGENVVL+GE+D
Sbjct: 22 LVILRDGKKLHGVLRSYDQFANLVLEETIERIYSKNHYADKYVGLYLIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
++E L++ +++ +++ K++R A+ L E+
Sbjct: 82 LDEEDEIPLRRADYQELEPFHKQDIAAKKQRDDAKAQILHEQ 123
>gi|323337049|gb|EGA78305.1| Lsm1p [Saccharomyces cerevisiae Vin13]
Length = 172
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEV 59
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GEV
Sbjct: 56 VLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGEV 115
Query: 60 DKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
D +KE P ++++ ++ ++K E + + K++ G+ V D D++
Sbjct: 116 DIDKEDQPLEAMERIPFKEAWLTKQKNDEKRFKEETHKGKKMARHGI--VYDFHKSDMY 172
>gi|254571117|ref|XP_002492668.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238032466|emb|CAY70489.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|328353325|emb|CCA39723.1| Sm-like protein LSm1 [Komagataella pastoris CBS 7435]
Length = 157
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 14/107 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-NQYGDIPRGIFIIRGENVVLMGEVD 60
V LR+GR IG LR+ DQFANLVL T+ERI++G ++Y + P+G+F+IRGENV L+GE+D
Sbjct: 48 VTLREGRVFIGILRTFDQFANLVLQDTVERIYIGDDKYAEAPQGVFLIRGENVSLVGEID 107
Query: 61 KEKEH----------CPQLQQVSVEDILNAQRKEQEVKQERSRMLAK 97
+++ P+ Q++ E + Q K +ER ML+K
Sbjct: 108 LDQQDKDLEKRSQIPFPEAQRIRKELVAAKQAK---TTKERELMLSK 151
>gi|406859798|gb|EKD12861.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 170
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 71/109 (65%), Gaps = 18/109 (16%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---------GNQ-----YGDIPRGIF 46
MV LRDGR LIG LRS DQFANLVL TIERI V GN+ Y D+PRGIF
Sbjct: 41 MVALRDGRKLIGVLRSWDQFANLVLQSTIERIFVPPSSTPTKPGNEYQPGLYADVPRGIF 100
Query: 47 IIRGENVVLMGEVDKEKEHCPQ--LQQVSVEDI--LNAQRKEQEVKQER 91
+RGENV+L+GE+D +K+ P ++ VE I L+ +RK +E ++E+
Sbjct: 101 FVRGENVLLLGEIDLDKDDDPPPGYEKADVELIHRLSKERKAREARREK 149
>gi|145352933|ref|XP_001420788.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581023|gb|ABO99081.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 126
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV- 59
+V LRDG +IG LRS DQFAN+VL +ERI VG + DIP G++I+RGENVVLMG+V
Sbjct: 22 LVALRDGSNIIGTLRSFDQFANIVLESAVERIIVGKMFSDIPLGLYIVRGENVVLMGDVG 81
Query: 60 -DKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRL 99
+ + + L +V +I+ A+ +Q + + +L KR+
Sbjct: 82 ANGDLDGTEGLIEVDNAEIIRAREADQTAEAMKGDIL-KRM 121
>gi|299755579|ref|XP_001828752.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea okayama7#130]
gi|298411289|gb|EAU93018.2| hypothetical protein CC1G_06738 [Coprinopsis cinerea okayama7#130]
Length = 116
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 63/102 (61%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T ERI+ N + + G+F+IRGENVVLMGE+D
Sbjct: 2 LVVLRDGRKLHGVLRSYDQFANLVLEDTYERIYHRNMFAEQHHGLFLIRGENVVLMGEID 61
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
+KE L+QV + KE E K+ A+ L E
Sbjct: 62 LDKEDDVPLKQVEYHQLEPYHIKELEHKKLHEEAKAQYLFEH 103
>gi|344233801|gb|EGV65671.1| Sm-like ribonucleo protein [Candida tenuis ATCC 10573]
Length = 166
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 22/132 (16%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ----------YGDIPRGIFIIRG 50
+LLRDGR L G LR+ DQFANLVL T ERI++ + +G+ RG+F++RG
Sbjct: 41 FLLLRDGRNLFGVLRTFDQFANLVLQDTTERIYLDAEGSKSLEKPARFGETYRGVFMVRG 100
Query: 51 ENVVLMG--EVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQ-ERSRMLAKRLKERGL--- 104
ENVV+MG ++D E EH LQ + E E E+K +R R+ A++ K + L
Sbjct: 101 ENVVMMGAVDIDHEDEHLEVLQNIPFE------AAEAELKAIQRERVQAEKQKTKSLLSR 154
Query: 105 SFVPDLINDDLF 116
+ D DL+
Sbjct: 155 GLINDFTKSDLY 166
>gi|212537161|ref|XP_002148736.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
gi|210068478|gb|EEA22569.1| small nuclear ribonucleoprotein (LSM1), putative [Talaromyces
marneffei ATCC 18224]
Length = 169
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR LIG LRS DQFANLVL T+ERI+ GN Y + G++++RGENV+L+GE+D
Sbjct: 54 VLVLRDGRKLIGVLRSWDQFANLVLQDTVERIYAGNLYAEEHVGLYLVRGENVLLLGEID 113
Query: 61 KEKE-HCPQ-LQQVSVEDI 77
+KE P+ L Q S++++
Sbjct: 114 LDKEDDLPETLTQTSMKEV 132
>gi|323308589|gb|EGA61833.1| Lsm1p [Saccharomyces cerevisiae FostersO]
Length = 143
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 115 VDIDKEDQP 123
>gi|365983954|ref|XP_003668810.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
gi|343767577|emb|CCD23567.1| hypothetical protein NDAI_0B05340 [Naumovozyma dairenensis CBS 421]
Length = 183
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ N+Y + GIF+IRGENVV++GE
Sbjct: 66 FVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLSEENKYAEQELGIFMIRGENVVMLGE 125
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P ++++S +D ++ E K + K GL + D DL+
Sbjct: 126 VDIDKEDQPLELMERISFKDASKIKKNNDEKKFKSETKKGKEYARFGL--IYDFHKSDLY 183
>gi|367017368|ref|XP_003683182.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
gi|359750846|emb|CCE93971.1| hypothetical protein TDEL_0H01120 [Torulaspora delbrueckii]
Length = 165
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQYGDIPRGIFIIRGENVVLMGE 58
VLLRDG+ L G LR+ DQ+AN++L +ERI+V NQY + RG+F++RGENVV++GE
Sbjct: 48 FVLLRDGKMLFGVLRTFDQYANVILEHCVERIYVPESNQYAEETRGLFMVRGENVVMLGE 107
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD ++E P ++++ + +R E + K+L GL + D D++
Sbjct: 108 VDIDREDGPLESMERIPFAEASKRRRDGDEARYRHETAKGKQLARYGLLY--DFHKSDMY 165
>gi|395334284|gb|EJF66660.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 136
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G LRS DQFANLVL T+ERI+ + + ++ RG+F+IRGENVVL+GE+D
Sbjct: 22 LVVLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEVWRGLFLIRGENVVLLGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
++E L+QV +L A K Q++ ++ R
Sbjct: 82 LDQEDEIPLRQVEWA-VLEAYHK-QDIADKKKR 112
>gi|401625161|gb|EJS43183.1| lsm1p [Saccharomyces arboricola H-6]
Length = 172
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEERGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 115 VDIDKEDQP 123
>gi|323332984|gb|EGA74386.1| Lsm1p [Saccharomyces cerevisiae AWRI796]
Length = 167
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 115 VDIDKEDQP 123
>gi|365760012|gb|EHN01761.1| Lsm1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401839808|gb|EJT42849.1| LSM1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 172
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 115 VDIDKEDQP 123
>gi|237841501|ref|XP_002370048.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
gi|211967712|gb|EEB02908.1| U6 snRNA-associated Sm-like protein LSm1, putative [Toxoplasma
gondii ME49]
Length = 335
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLR+ DQF NLVL T++R+ V N Y D+ G I+RG+N++L G VD
Sbjct: 231 LVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGAVD 290
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
+ L+ + DIL A++ E+E QER +
Sbjct: 291 DSRAS--PLEPKPLCDILAARQAEEE--QERQK 319
>gi|323354402|gb|EGA86241.1| Lsm1p [Saccharomyces cerevisiae VL3]
Length = 167
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI+ N+Y + RGIF+IRGENVV++GE
Sbjct: 55 FVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENVVMLGE 114
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 115 VDIDKEDQP 123
>gi|221504537|gb|EEE30210.1| lsm1, putative [Toxoplasma gondii VEG]
Length = 335
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLR+ DQF NLVL T++R+ V N Y D+ G I+RG+N++L G VD
Sbjct: 231 LVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGAVD 290
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
+ L+ + DIL A++ E+E QER +
Sbjct: 291 DSRAS--PLEPKPLCDILAARQAEEE--QERQK 319
>gi|221482497|gb|EEE20845.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 335
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 4/93 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLR+ DQF NLVL T++R+ V N Y D+ G I+RG+N++L G VD
Sbjct: 231 LVVLRDGRKLIGYLRTFDQFGNLVLEGTVQRMVVDNAYADLYLGCMIVRGDNMILFGAVD 290
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
+ L+ + DIL A++ E+E QER +
Sbjct: 291 DSRAS--PLEPKPLCDILAARQAEEE--QERQK 319
>gi|58261498|ref|XP_568159.1| RNA cap binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115443|ref|XP_773435.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256061|gb|EAL18788.1| hypothetical protein CNBI0490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230241|gb|AAW46642.1| RNA cap binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 135
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG RS DQFAN +L +ER+H +Y D G+ ++RGENVV +GE+D
Sbjct: 22 LVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLVRGENVVALGEID 81
Query: 61 KEKEHCPQLQQVSVEDI---LNAQRKEQE 86
E LQQV+V++I ++A+ K++E
Sbjct: 82 LIAEDMVPLQQVNVQEIEEKISAENKQRE 110
>gi|424513743|emb|CCO66365.1| U6 snRNA-associated Sm-like protein LSm1 [Bathycoccus prasinos]
Length = 124
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 49/64 (76%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRD ++G LRS DQFAN+VL +ER+ VG Y D+P G++I+RGENVVLMG+VD
Sbjct: 22 LVVLRDNSNIVGTLRSFDQFANIVLENAVERMIVGTHYSDVPLGLYIVRGENVVLMGDVD 81
Query: 61 KEKE 64
+ E
Sbjct: 82 EAIE 85
>gi|440632690|gb|ELR02609.1| hypothetical protein GMDG_05572 [Geomyces destructans 20631-21]
Length = 185
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN---QYGDIPRGIFIIRGENVVLMG 57
MV LRDGR LIG LRS DQFANLVL T ER+ + Q+ D+P+G F++RGENV+L+G
Sbjct: 68 MVALRDGRKLIGVLRSWDQFANLVLQSTSERLFTHSPPLQFADVPQGTFLVRGENVLLLG 127
Query: 58 EVDKEKE 64
EVD +K+
Sbjct: 128 EVDLDKD 134
>gi|406696065|gb|EKC99361.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS 8904]
Length = 113
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG LRS DQFAN +L T+ER++ G ++ DI G+ +IRGENVV +GE+D
Sbjct: 22 LVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLIRGENVVALGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVK 88
E L+Q+ +++ + A+ E EV
Sbjct: 82 LIAEDEIPLRQIPLDE-MRAKLAEVEVS 108
>gi|401883959|gb|EJT48139.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 147
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG LRS DQFAN +L T+ER++ G ++ DI G+ +IRGENVV +GE+D
Sbjct: 22 LVVLRDGRKLIGVLRSYDQFANFLLESTVERLYNGFEFADIDIGVLLIRGENVVALGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVK-QERSRMLAKRLKER 102
E L+Q+ +++ + A+ E EV + ++ K+ +ER
Sbjct: 82 LIAEDEIPLRQIPLDE-MRAKLAEVEVSFRVVKKLTGKKRRER 123
>gi|405119473|gb|AFR94245.1| RNA cap binding protein [Cryptococcus neoformans var. grubii H99]
Length = 135
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 3/89 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG RS DQFAN +L +ER+H +Y D G+ ++RGENVV +GE+D
Sbjct: 22 LVILRDGRKLIGLFRSYDQFANFLLESCVERLHYKLEYADKDIGVLLVRGENVVALGEID 81
Query: 61 KEKEHCPQLQQVSVEDI---LNAQRKEQE 86
E LQQV++++I ++A+ K++E
Sbjct: 82 LIAEDMVPLQQVNLQEIEEKISAENKQRE 110
>gi|410081531|ref|XP_003958345.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
gi|372464933|emb|CCF59210.1| hypothetical protein KAFR_0G01760 [Kazachstania africana CBS 2517]
Length = 180
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDGR L G LR+ DQ+ANL+L +ERI++ N+Y + RG+F+IRGENVV++GE
Sbjct: 63 FVLLRDGRLLFGVLRTFDQYANLILQHCVERIYLTDENKYAEEDRGVFMIRGENVVMLGE 122
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 123 VDIDKEDQP 131
>gi|358396059|gb|EHK45446.1| hypothetical protein TRIATDRAFT_79595 [Trichoderma atroviride IMI
206040]
Length = 168
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 11/75 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI-------HVGNQ----YGDIPRGIFIIR 49
MV+LRDGR LIG LRS DQFAN+VL T ERI H Q Y DIP GIF++R
Sbjct: 42 MVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRADNHDAQQPYGYYADIPHGIFLVR 101
Query: 50 GENVVLMGEVDKEKE 64
GENV+L+GE+D +K+
Sbjct: 102 GENVLLLGEIDLDKD 116
>gi|156044792|ref|XP_001588952.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980]
gi|154694888|gb|EDN94626.1| hypothetical protein SS1G_10500 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 176
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 22/121 (18%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-------------YGDIPRGIFI 47
M+ LRDGR LIG LRS DQF VL T+ERI V Y D+PRG+F+
Sbjct: 50 MISLRDGRKLIGILRSWDQF---VLQSTVERIFVAPPSPSTPGAVTQPGLYADVPRGLFL 106
Query: 48 IRGENVVLMGEV--DKEKEHCPQLQQVSVEDI--LNAQRKEQEVKQERSRMLAKRLKERG 103
+RGENV+L+GE+ DK+ + P ++ E + L+ +R+ + K+++SR+ K+L E G
Sbjct: 107 VRGENVLLLGEIDLDKDDDAPPGYEKADAELVHKLDKERRALDSKKDKSRL--KKLAELG 164
Query: 104 L 104
Sbjct: 165 F 165
>gi|302695391|ref|XP_003037374.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
gi|300111071|gb|EFJ02472.1| hypothetical protein SCHCODRAFT_64638 [Schizophyllum commune
H4-8]
Length = 136
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 54/72 (75%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L+G LRS DQFANLVL T E+I+ N + + G+F+IRGENVVLMGE+D
Sbjct: 22 LVVLRDGRKLVGVLRSYDQFANLVLEDTWEKIYHSNLWAEKHVGLFLIRGENVVLMGEID 81
Query: 61 KEKEHCPQLQQV 72
++E L+QV
Sbjct: 82 LDREDDVPLRQV 93
>gi|50293209|ref|XP_449016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528329|emb|CAG61986.1| unnamed protein product [Candida glabrata]
Length = 158
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQYGDIPRGIFIIRGENVVLMGE 58
VLLRDG+ G LR+ DQ+ANL+L +ERI+V +Y + RGIF+IRGENVV++GE
Sbjct: 41 FVLLRDGKLFFGVLRTFDQYANLILQDCVERIYVQENGEYAEEDRGIFMIRGENVVMLGE 100
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
VD +KE P L+++ E+ ++ ++E + + K L GLS D DL+
Sbjct: 101 VDIDKEDEPLKSLKRIPFEEAKKLKQLKEEKRCKEEFATGKELARYGLS--HDFHKQDLY 158
>gi|449019941|dbj|BAM83343.1| similar to Sm-like protein LSm1 [Cyanidioschyzon merolae strain
10D]
Length = 124
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V LRDGR +GYLRS DQ+ NL L ER+ V ++ + DIPRG+ + RGENVVL G V
Sbjct: 14 LVYLRDGRFFLGYLRSFDQYGNLTLEDATERVVVNDEAFADIPRGLQVFRGENVVLFGAV 73
Query: 60 DKEK---EHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
D E+ E +L++V+ E+I +R EQ V ++ + A R +ER
Sbjct: 74 DSEQRELEFLRKLRRVTEEEI---RRMEQAVAEDHA---ALRRRER 113
>gi|428178017|gb|EKX46894.1| hypothetical protein GUITHDRAFT_152240 [Guillardia theta CCMP2712]
Length = 210
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V LRDGR +G++RS DQ+ N+VL ER VGN + D G+++IRGEN+VL+ E+D
Sbjct: 99 LVTLRDGRHFVGFMRSFDQYGNVVLEDAFERHVVGNSFADERMGLYVIRGENLVLLAELD 158
Query: 61 KEKEHC-PQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
KE P+L++V ++ I+ AQ+ + ++ +L K+L + L
Sbjct: 159 MHKEQNQPKLREVPLQTIM-AQKAALKHEKAEDELLRKKLSAQALGL 204
>gi|297299237|ref|XP_001090589.2| PREDICTED: u6 snRNA-associated Sm-like protein LSm1 isoform 1
[Macaca mulatta]
Length = 144
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 69/117 (58%), Gaps = 11/117 (9%)
Query: 1 MVLLRDGRTLIGYLRSVDQF--ANLVLHKTIERIHVGN---------QYGDIPRGIFIIR 49
+VLLRDGRTLIG+LRS+DQF L + + N Q+ + ++
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFEMPEFCLKDDDDDTALSNKTVGKKQQQQHELLSERFVAVK 78
Query: 50 GENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSF 106
G+ V+L+GE+D EKE LQQVS+E+IL QR EQ+ K E ++ + LK+RGLS
Sbjct: 79 GKRVLLVGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDRGLSI 135
>gi|413918441|gb|AFW58373.1| hypothetical protein ZEAMMB73_585309 [Zea mays]
Length = 100
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGEL 82
>gi|238007068|gb|ACR34569.1| unknown [Zea mays]
gi|414587040|tpg|DAA37611.1| TPA: hypothetical protein ZEAMMB73_983155 [Zea mays]
Length = 102
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 47/59 (79%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+VLLRDGR L+G L S DQFAN+VL ER+ VG QY D+P G+++IRGENVVL+GE+
Sbjct: 24 IVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGEL 82
>gi|340515572|gb|EGR45825.1| predicted protein [Trichoderma reesei QM6a]
Length = 174
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-----------NQYGDIPRGIFIIR 49
MV+LRDGR LIG LRS DQFAN+VL T ERI + DIP GIF++R
Sbjct: 48 MVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPRSEYPYGYFADIPHGIFLVR 107
Query: 50 GENVVLMGEVDKEK-EHCPQLQQVSVEDIL 78
GENV+L+GE+D +K + P Q++ D++
Sbjct: 108 GENVLLLGEIDLDKDDDAPPGYQLAEVDVV 137
>gi|402076659|gb|EJT72082.1| hypothetical protein GGTG_11329 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 190
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 70/109 (64%), Gaps = 15/109 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQ---------YGDIPRGIFIIR 49
M+ LRDGR L G LRS DQFANLVL T ER+ V G+ Y DIPRG+F++R
Sbjct: 64 MIALRDGRKLSGVLRSWDQFANLVLQSTTERLFVPPGSTTGAPEDRGLYADIPRGLFLVR 123
Query: 50 GENVVLMGEVDKEKEHCPQL----QQVSVEDILNAQRKEQEVKQERSRM 94
GENV+L+GE+D +K+ P ++S+ + L +RK +E +E++R+
Sbjct: 124 GENVLLLGEIDLDKDDDPPPGYDKAELSLVEALIKRRKAEEKAREKTRL 172
>gi|380484749|emb|CCF39799.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 177
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 11/70 (15%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----------GNQYGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL T+ER++ G + DI RGIF++R
Sbjct: 51 MVALRDGRKLIGVLRSWDQFANLVLQDTVERVYAYPDLEANPPREGGMFADIKRGIFLVR 110
Query: 50 GENVVLMGEV 59
GENV+L+GE+
Sbjct: 111 GENVLLLGEI 120
>gi|8778287|gb|AAF79296.1|AC068602_19 F14D16.28 [Arabidopsis thaliana]
Length = 223
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 39/125 (31%)
Query: 1 MVLLRDGRTLIGYLRSVDQF-----------------------------ANLVLHKTIER 31
+VLLRDGR L+G LRS DQF AN VL + ER
Sbjct: 81 LVLLRDGRKLMGLLRSFDQFGTCLSLLHRKSKVFEMVLRNVSFVFGFLEANAVLEEAYER 140
Query: 32 IHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCP---------QLQQVSVEDILN-AQ 81
+ VG+ Y DIP G++IIRGENVVL+GE+D EKE P ++++VS +L+ AQ
Sbjct: 141 VIVGDLYCDIPLGLYIIRGENVVLIGELDVEKEELPAHMVQVPEAEIKRVSANILLSLAQ 200
Query: 82 RKEQE 86
+ E+E
Sbjct: 201 KAEKE 205
>gi|429860091|gb|ELA34841.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 178
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 73/119 (61%), Gaps = 17/119 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----------GNQYGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL TIER+ + DI RGIF++R
Sbjct: 52 MVALRDGRKLIGVLRSWDQFANLVLQDTIERVFAHPDPEANPPRPSGLFADIKRGIFLVR 111
Query: 50 GENVVLMGEVDKEKEHCP----QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
GENV+L+GE+D +K+ P + + + L A++KEQ+ +++SR+ K+L + G
Sbjct: 112 GENVLLLGEIDLDKDDDPPPGYEPADLKLVHKLAAEKKEQDKARDKSRI--KKLSKLGF 168
>gi|310796734|gb|EFQ32195.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 177
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 11/70 (15%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----------GNQYGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL T+ERI+ G + DI RGIF++R
Sbjct: 51 MVALRDGRKLIGVLRSWDQFANLVLQDTVERIYAHPDPDANPPREGGLFADIKRGIFLVR 110
Query: 50 GENVVLMGEV 59
GENV+L+GE+
Sbjct: 111 GENVLLLGEI 120
>gi|358389037|gb|EHK26630.1| hypothetical protein TRIVIDRAFT_50053 [Trichoderma virens Gv29-8]
Length = 169
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 56/88 (63%), Gaps = 13/88 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV------GNQY-----GDIPRGIFIIR 49
MV+LRDGR LIG LRS DQFAN+VL T ERI G++Y DI GIF++R
Sbjct: 43 MVVLRDGRKLIGVLRSWDQFANIVLQSTTERIFAPRPDNPGSEYPYGYFADITHGIFLVR 102
Query: 50 GENVVLMGEV--DKEKEHCPQLQQVSVE 75
GENV+L+GE+ DK+ + P + VE
Sbjct: 103 GENVLLLGEIDLDKDDDAPPGYELAEVE 130
>gi|328867402|gb|EGG15785.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 84
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 47/59 (79%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V+LRDG+ IG +R+ DQFAN++L T+ERI+VGN Y D G+F IRG+NVV++GE+
Sbjct: 17 IVVLRDGKKFIGVMRTFDQFANIILQDTVERIYVGNCYSDKYLGVFFIRGDNVVILGEI 75
>gi|366990971|ref|XP_003675253.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
gi|342301117|emb|CCC68882.1| hypothetical protein NCAS_0B07980 [Naumovozyma castellii CBS 4309]
Length = 175
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGE 58
VLLRDG+ L G LR+ DQ+ANL+L +ERI++ N+Y + GIF+IRGENVV++GE
Sbjct: 58 FVLLRDGKLLFGILRTFDQYANLILQHCVERIYLTEENKYAENELGIFMIRGENVVMLGE 117
Query: 59 VDKEKEHCP 67
VD +KE P
Sbjct: 118 VDIDKEDKP 126
>gi|392578215|gb|EIW71343.1| hypothetical protein TREMEDRAFT_60273 [Tremella mesenterica DSM
1558]
Length = 135
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 68/105 (64%), Gaps = 2/105 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR +IG RS DQFAN ++ +ER++ +Y D GI ++RGENVV +GE+D
Sbjct: 22 LVILRDGRKIIGVFRSYDQFANFLMESVVERLYHKMEYADRDIGILLVRGENVVAVGEID 81
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKR-LKERGL 104
E L++ SVE+I+ + E+ K+++ +++ + L+E G
Sbjct: 82 LIAEDLIPLRETSVENIM-TRITEENTKRDKDQIIKENVLREYGF 125
>gi|367054976|ref|XP_003657866.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
gi|347005132|gb|AEO71530.1| hypothetical protein THITE_2124020 [Thielavia terrestris NRRL 8126]
Length = 179
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 48/68 (70%), Gaps = 9/68 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----GNQ----YGDIPRGIFIIRGE 51
MV LRDGR L+G LRS DQFANLVL T ERI V NQ Y DI RG+F++RGE
Sbjct: 55 MVALRDGRKLLGILRSWDQFANLVLQSTKERIFVPPGTAPNQTRGLYADIDRGLFLVRGE 114
Query: 52 NVVLMGEV 59
NV+LMGE+
Sbjct: 115 NVLLMGEI 122
>gi|302899081|ref|XP_003047975.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
gi|256728907|gb|EEU42262.1| hypothetical protein NECHADRAFT_100373 [Nectria haematococca mpVI
77-13-4]
Length = 171
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 11/70 (15%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----------GNQYGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL TIERI Y DI GIF++R
Sbjct: 45 MVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPLPESAGSDQPAGLYADITHGIFLVR 104
Query: 50 GENVVLMGEV 59
GENV+L+GE+
Sbjct: 105 GENVLLLGEI 114
>gi|342873296|gb|EGU75499.1| hypothetical protein FOXB_13986 [Fusarium oxysporum Fo5176]
Length = 169
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 73/119 (61%), Gaps = 17/119 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-----------YGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL T+ERI + Y DI GIF++R
Sbjct: 43 MVALRDGRKLIGVLRSWDQFANLVLQSTVERIFAPSPESAGSDRPTGLYADINHGIFLVR 102
Query: 50 GENVVLMGEVDKEKEHCP----QLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
GENV+L+GE+D +++ P +L ++ V L ++K + +E++R+ K+L ++G
Sbjct: 103 GENVLLLGEIDLDRDDDPPPGFELGELDVVKKLAEEKKAVDKAREKARV--KKLAKQGF 159
>gi|46138721|ref|XP_391051.1| hypothetical protein FG10875.1 [Gibberella zeae PH-1]
gi|408390592|gb|EKJ69984.1| hypothetical protein FPSE_09829 [Fusarium pseudograminearum CS3096]
Length = 169
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 11/70 (15%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-----------YGDIPRGIFIIR 49
MV LRDGR LIG LRS DQFANLVL TIERI + Y DI GIF++R
Sbjct: 43 MVALRDGRKLIGVLRSWDQFANLVLQSTIERIFAPSPDSAGSDRPTGLYADINHGIFLVR 102
Query: 50 GENVVLMGEV 59
GENV+L+GE+
Sbjct: 103 GENVLLLGEI 112
>gi|336468246|gb|EGO56409.1| hypothetical protein NEUTE1DRAFT_45645 [Neurospora tetrasperma FGSC
2508]
gi|350289506|gb|EGZ70731.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 163
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 10/69 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQ--------YGDIPRGIFIIRG 50
MV LRDGR L G LRS DQFANLVL +T ERI V G Q Y D+ RG+F++RG
Sbjct: 38 MVALRDGRKLTGILRSWDQFANLVLQQTKERIFVPPGTQSPAQTRGLYADVDRGLFVVRG 97
Query: 51 ENVVLMGEV 59
ENV+LMGE+
Sbjct: 98 ENVLLMGEI 106
>gi|401397747|ref|XP_003880128.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
gi|325114537|emb|CBZ50093.1| hypothetical protein NCLIV_005690 [Neospora caninum Liverpool]
Length = 174
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLR+ DQF N+VL T++R+ V N Y D+ G I+RG+N++L G VD
Sbjct: 70 LVVLRDGRKLIGYLRTFDQFGNIVLEGTVQRLLVDNAYADLYVGCMIVRGDNMILFGAVD 129
Query: 61 KEKEHCPQLQQVSVEDILNA 80
+ L+ + D+L A
Sbjct: 130 DSRPT--PLEPKPLCDVLAA 147
>gi|268532098|ref|XP_002631177.1| C. briggsae CBR-LSM-1 protein [Caenorhabditis briggsae]
Length = 125
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIGYLRS+DQFANL+L +ER V + + +G +IRGENV L GE+D
Sbjct: 23 LVVLRDGRKLIGYLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGEID 82
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
+ P L QVS E+ +R E E + KR E+
Sbjct: 83 ---DSIPTGLTQVSPEEF---RRIEDEYLAKNPPKFLKRQAEK 119
>gi|346324590|gb|EGX94187.1| small nuclear ribonucleoprotein (LSM1), putative [Cordyceps
militaris CM01]
Length = 178
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 17/123 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-----------------YGDIPR 43
MV+LRDGR L+G LRS DQFAN+VL T ER+ Y DI
Sbjct: 45 MVVLRDGRKLVGVLRSWDQFANIVLQSTTERLFALQPPQPSDAAPSDTAPPRGLYADILH 104
Query: 44 GIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERG 103
GIF++RGENV+L+GE+D +++ P E L + ++ ++RSR A+ K
Sbjct: 105 GIFLVRGENVLLLGEMDLDRDDLPPPGYEQGEVALVKRLADEARARDRSRDKARARKLAK 164
Query: 104 LSF 106
L F
Sbjct: 165 LGF 167
>gi|341038886|gb|EGS23878.1| hypothetical protein CTHT_0005870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 209
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 9/68 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-----GNQ----YGDIPRGIFIIRGE 51
MV LRDGR LIG LRS DQFANLVL T ERI + NQ Y DI RG+F++RGE
Sbjct: 85 MVALRDGRKLIGILRSWDQFANLVLQSTKERIFIPPNTMPNQPRGLYADIDRGLFLVRGE 144
Query: 52 NVVLMGEV 59
NV+L+GE+
Sbjct: 145 NVLLLGEI 152
>gi|17533843|ref|NP_496385.1| Protein LSM-1 [Caenorhabditis elegans]
gi|3876945|emb|CAA93263.1| Protein LSM-1 [Caenorhabditis elegans]
Length = 125
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG+LRS+DQFANL+L +ER V + + +G +IRGENV L GE+D
Sbjct: 23 LVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGEID 82
Query: 61 KEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
E L QVS E+ +R E E + KR E+
Sbjct: 83 DTIETG--LTQVSPEEF---RRLEDEYIAKNPPKFLKRQAEK 119
>gi|171689342|ref|XP_001909611.1| hypothetical protein [Podospora anserina S mat+]
gi|170944633|emb|CAP70744.1| unnamed protein product [Podospora anserina S mat+]
Length = 193
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 9/73 (12%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---------GNQYGDIPRGIFIIRGE 51
M+ LRDGR LIG LRS DQFANLVL T ERI V + DI RG F++RGE
Sbjct: 68 MISLRDGRKLIGILRSWDQFANLVLQSTKERIFVPPVLSEKEPTGIFADIDRGTFLVRGE 127
Query: 52 NVVLMGEVDKEKE 64
NV+L+GE+D +K+
Sbjct: 128 NVLLLGEIDLDKD 140
>gi|323447461|gb|EGB03380.1| hypothetical protein AURANDRAFT_72740 [Aureococcus anophagefferens]
Length = 129
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 60/91 (65%), Gaps = 8/91 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-------GNQYGDIPRGIFIIRGENV 53
+++LRDGR L+G +RS DQF+N+VL T ER V YGD+P G+++IRG++V
Sbjct: 25 LIILRDGRNLVGVMRSFDQFSNVVLEDTYERRVVIPDDESQPAVYGDVPLGLYVIRGDSV 84
Query: 54 VLMGEVDKEKEHCP-QLQQVSVEDILNAQRK 83
VL+GEV +E E +Q+ +ED++ +R
Sbjct: 85 VLLGEVAEELEASEDHPRQLPIEDVVALERS 115
>gi|341888884|gb|EGT44819.1| CBN-LSM-1 protein [Caenorhabditis brenneri]
Length = 125
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG+LRS+DQFANL+L +ER V + + +G +IRGENV L GE+D
Sbjct: 23 LVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETSQGFMLIRGENVELAGEID 82
Query: 61 KEKEHCPQ-LQQVSVEDI 77
+ P L QVS E+
Sbjct: 83 ---DSIPNGLTQVSPEEF 97
>gi|308510334|ref|XP_003117350.1| CRE-LSM-1 protein [Caenorhabditis remanei]
gi|308242264|gb|EFO86216.1| CRE-LSM-1 protein [Caenorhabditis remanei]
Length = 125
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR LIG+LRS+DQFANL+L +ER V + + +G +IRGENV L GE+D
Sbjct: 23 LVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQGFMLIRGENVELAGEID 82
Query: 61 KEKEHCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKER 102
+ P L QVS E+ +R E E + KR E+
Sbjct: 83 ---DSIPTGLTQVSPEEF---RRIEDEYLAKNPPKFLKRQAEK 119
>gi|348673586|gb|EGZ13405.1| hypothetical protein PHYSODRAFT_316685 [Phytophthora sojae]
Length = 122
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+++LRDGR L+GYLRS DQ++N++L T ER G + DI G+ IIRG+N+VL+GE+D
Sbjct: 20 LMVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGELD 79
Query: 61 KEKE 64
+KE
Sbjct: 80 SDKE 83
>gi|358060802|dbj|GAA93573.1| hypothetical protein E5Q_00217 [Mixia osmundae IAM 14324]
Length = 145
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 11/113 (9%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR--GIFIIRGENVVLMGE 58
+V+LRDGR L+G RS DQ+AN VL TIE+I+ R G++++RGENV L+GE
Sbjct: 27 LVVLRDGRKLMGMFRSYDQYANFVLCDTIEQIYHPESQTIAERQVGVYLVRGENVALLGE 86
Query: 59 VDKEKEHCP--QLQQVSVEDILNAQRKE----QEVKQERSRMLAKRLKERGLS 105
+D E E P +L Q + +L ++E Q +K++R ++L L +RG S
Sbjct: 87 IDLELEDEPPRRLNQAPIHTLLPVVKEEANRRQTLKEKRDKIL---LDQRGFS 136
>gi|320585919|gb|EFW98598.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 182
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 17/81 (20%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-----------------NQYGDIPR 43
MV+LRDGR +IG LR+ DQFANL+L IER + Y DIPR
Sbjct: 50 MVVLRDGRKVIGVLRTWDQFANLILQNAIERTFLAPGTFEAAAAPESAAQGHGLYADIPR 109
Query: 44 GIFIIRGENVVLMGEVDKEKE 64
G +++RGENV+L+GE+D +++
Sbjct: 110 GTYLVRGENVLLLGEIDLDRD 130
>gi|301108017|ref|XP_002903090.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097462|gb|EEY55514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 102
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
++LRDGR L+GYLRS DQ++N++L T ER G + DI G+ IIRG+N+VL+GE+D
Sbjct: 1 MVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGELDS 60
Query: 62 EKE 64
+KE
Sbjct: 61 DKE 63
>gi|400597652|gb|EJP65382.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 196
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 26/132 (19%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ----------------------- 37
MV+LRDGR L+G LRS DQFAN+VL T ERI
Sbjct: 54 MVVLRDGRKLVGVLRSWDQFANIVLQSTTERIFALQPPSPPPTEAADSETTAAATATTTP 113
Query: 38 ---YGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRM 94
Y DI GIF++RGENV+L+GE+D +++ P E L + E+ +E+SR
Sbjct: 114 RGLYADIFHGIFLVRGENVLLLGEMDLDRDDIPPRGYEQGELALVRRLAEESKAREKSRD 173
Query: 95 LAKRLKERGLSF 106
A+ K L F
Sbjct: 174 KARARKLARLGF 185
>gi|66770917|gb|AAY54770.1| IP05048p [Drosophila melanogaster]
Length = 81
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGE 51
MVLLRDGRTLIGYLRSVDQFANLVL +TIERIHVG ++ R + RGE
Sbjct: 24 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIHVGRRHSS--RSLHHSRGE 72
>gi|378726968|gb|EHY53427.1| hypothetical protein HMPREF1120_01620 [Exophiala dermatitidis
NIH/UT8656]
Length = 216
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 36/135 (26%)
Query: 3 LLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--------------------------- 35
+LRDGR + G LRS DQFANLVL T ER V
Sbjct: 68 VLRDGRKIFGVLRSWDQFANLVLTDTRERYFVSIPAGTSPDAISATASQDAPSLSANTSL 127
Query: 36 -------NQYGDIPRGIFIIRGENVVLMGEV--DKEKEHCPQLQQVSVEDILNAQRKEQE 86
N Y DIPRG +++RGENV+L+GEV D+E + P + VE++ QR
Sbjct: 128 STATLPRNLYCDIPRGTYLVRGENVLLLGEVDLDREDDPPPGYELGDVEEVFRLQRAIDL 187
Query: 87 VKQERSRMLAKRLKE 101
K+ + ++ A+++ +
Sbjct: 188 EKKRKDKIRARKVGQ 202
>gi|195606938|gb|ACG25299.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
gi|413918443|gb|AFW58375.1| small nuclear ribonucleoprotein LSM1 [Zea mays]
Length = 105
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Query: 9 TLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCP- 67
+L G+L + N+VL ER+ VG QY D+P G+++IRGENVVL+GE+D+EK+ P
Sbjct: 14 SLAGFLDT-----NVVLQGACERVIVGEQYCDVPLGLYVIRGENVVLIGELDREKDELPA 68
Query: 68 QLQQVSVEDILNAQRKEQEVKQERSRM 94
+ VS +I A++ E+E + + M
Sbjct: 69 HMTCVSEAEIRKAEKAEREARDLKGTM 95
>gi|388508020|gb|AFK42076.1| unknown [Medicago truncatula]
Length = 99
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 40/55 (72%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVL 55
+VLLRDGR L+G LRS DQFAN+VL ER+ VG+ Y D+P G+++IRG L
Sbjct: 24 LVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDLYCDVPLGLYVIRGGECCL 78
>gi|294955662|ref|XP_002788617.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
gi|239904158|gb|EER20413.1| small nuclear ribonucleoprotein U6, putative [Perkinsus marinus
ATCC 50983]
Length = 137
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 10 LIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQL 69
LIG+L++ DQF N+VL T+ER Y DI GI IIRGEN+VL GEVD + P L
Sbjct: 45 LIGWLKTYDQFGNIVLQNTLERHVADGLYADIDLGIMIIRGENIVLFGEVDS-LDMEPAL 103
Query: 70 QQVSVEDILNAQRKEQEVKQERSRM 94
QQ + +L +E+ ER M
Sbjct: 104 QQAPLGQVL----AREEMNAEREAM 124
>gi|388521873|gb|AFK48998.1| unknown [Lotus japonicus]
Length = 80
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 38/50 (76%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRG 50
+VLLRDGR L+G LRS DQFAN VL ER+ VG+ Y DIP G+++IRG
Sbjct: 24 LVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRG 73
>gi|321255028|ref|XP_003193285.1| RNA cap binding protein [Cryptococcus gattii WM276]
gi|317459755|gb|ADV21498.1| RNA cap binding protein, putative [Cryptococcus gattii WM276]
Length = 160
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 28/114 (24%)
Query: 1 MVLLRDGRTLIGYLRSVDQFA-------------------------NLVLHKTIERIHVG 35
+V+LRDGR L+G RS DQFA N +L +ER+H
Sbjct: 22 LVILRDGRKLLGVFRSYDQFAFLLQPLCFDGILHILGILMQHANAANFLLESCVERLHYK 81
Query: 36 NQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDI---LNAQRKEQE 86
+Y D G+ ++RGENVV +GE+D E LQQV++++I ++A+ K++E
Sbjct: 82 LEYADKDIGVLLVRGENVVALGEIDLIAEDMVPLQQVNLQEIEEKISAENKQRE 135
>gi|12838881|dbj|BAB24361.1| unnamed protein product [Mus musculus]
gi|12849807|dbj|BAB28489.1| unnamed protein product [Mus musculus]
Length = 71
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 46/62 (74%)
Query: 45 IFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
IF++RGENVVL+GE+D EKE LQQVS+E+IL QR +Q+ + E ++ + LK+RGL
Sbjct: 1 IFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDRGL 60
Query: 105 SF 106
S
Sbjct: 61 SI 62
>gi|328773822|gb|EGF83859.1| hypothetical protein BATDEDRAFT_85570 [Batrachochytrium
dendrobatidis JAM81]
Length = 98
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 20 FANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK--EHCPQLQQVSVEDI 77
FANLVL T+ER + Y D+ RG+F IRGENVVL+GE+D EK E +L + + +
Sbjct: 2 FANLVLQDTVERTFIDGTYSDVYRGVFAIRGENVVLLGEIDPEKDAEALAKLTKATASET 61
Query: 78 LNAQRKEQEVKQERSRMLAKRLKERGL 104
+ + EQ+ K+ R + K L +G
Sbjct: 62 VGKFKHEQDFKKRRKDKVDKILASKGF 88
>gi|330907058|ref|XP_003295695.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
gi|311332811|gb|EFQ96206.1| hypothetical protein PTT_02318 [Pyrenophora teres f. teres 0-1]
Length = 235
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG------DIPR---------GIF 46
VLLRD + IG LRS DQFANLVL + ERI N IPR G+
Sbjct: 109 VLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPEAQPSSDPSIPRWLINDVKLPGVM 168
Query: 47 IIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEV-KQERSRMLAKRLKERGL 104
IRGENV + VD ++E P+ + + ED + + Q+ K+E AK LK+ G+
Sbjct: 169 TIRGENVTICATVDLDREEYPKGAKFAEEDQVRSLAASQKTEKKEVDSRKAKALKQAGI 227
>gi|224004408|ref|XP_002295855.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585887|gb|ACI64572.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 109
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQY----GDIPRGIFIIRGENVVLM 56
+V+LRDGR L+G LR+ DQFAN+VL T ER +G D+ G++++RG+ VVLM
Sbjct: 18 LVVLRDGRHLVGTLRTFDQFANMVLEDTSERRILGETTTCYQADVKLGLYVVRGDVVVLM 77
Query: 57 GEVDKE 62
GEVD E
Sbjct: 78 GEVDDE 83
>gi|240275998|gb|EER39511.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 297
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE-HCPQ-LQQVSVEDIL 78
NLVL T+ER++ GN + DI RGI+++RGENV+L+GEVD +KE P +Q E++
Sbjct: 202 TNLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVF 261
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGL 104
+++E +++R++ + +L+ G
Sbjct: 262 ALKKQEDNERKKRNKRSSAKLQTLGF 287
>gi|50545209|ref|XP_500142.1| YALI0A16775p [Yarrowia lipolytica]
gi|49646007|emb|CAG84074.1| YALI0A16775p [Yarrowia lipolytica CLIB122]
Length = 144
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
+V LR GR G LRS DQFANLVL T E+ + YG+ RG +IIRGENV LMGE
Sbjct: 29 VVTLRGGRKFFGILRSFDQFANLVLQDTYEKYFAVPEKVYGEEYRGTYIIRGENVELMGE 88
Query: 59 VD 60
V+
Sbjct: 89 VN 90
>gi|261195584|ref|XP_002624196.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239588068|gb|EEQ70711.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239610441|gb|EEQ87428.1| small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 216
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
+ R + + R + ANLVL T+ER++ GN + DI RGI++IRGENV+L+GEVD +K
Sbjct: 104 WKKNRIELPFFRQRMEIANLVLQGTVERLYAGNLFADIQRGIYLIRGENVLLLGEVDLDK 163
Query: 64 E-HCPQ-LQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
E P +Q E++ +++E +++ + +L+ G
Sbjct: 164 EDDIPTGYRQAPFEEVFALKKQEDNERKKGDKRRNTKLQTLGF 206
>gi|385305643|gb|EIF49604.1| lsm1p [Dekkera bruxellensis AWRI1499]
Length = 146
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 7/89 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQYGDI--PRGIFIIRGENVVLM 56
+V L DGRTL+G LR+ DQF NLV+H +ERI++ QY + PR ++IRGENVV+M
Sbjct: 30 IVNLWDGRTLVGVLRTFDQFGNLVIHDGVERIYLLDKKQYAESEKPR-TYLIRGENVVMM 88
Query: 57 GE--VDKEKEHCPQLQQVSVEDILNAQRK 83
E +D E E +L ++ + +K
Sbjct: 89 VELDIDMEDESLSELTRIDYDSAKKTWKK 117
>gi|325093356|gb|EGC46666.1| small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 262
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEH--CPQLQQVSVEDIL 78
NLVL T+ER++ GN + DI RGI+++RGENV+L+GEVD +KE +Q E++
Sbjct: 167 TNLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVF 226
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGL 104
+++E +++R++ + +L+ G
Sbjct: 227 ALKKQEDNERKKRNKRSSAKLQTLGF 252
>gi|12859584|dbj|BAB31701.1| unnamed protein product [Mus musculus]
Length = 70
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 46 FIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS 105
F++RGENVVL+GE+D EKE LQQVS+E+IL QR +Q+ + E ++ + LK+RGLS
Sbjct: 1 FVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVQQQTRLEAEKLKVQTLKDRGLS 60
Query: 106 F 106
Sbjct: 61 I 61
>gi|296812089|ref|XP_002846382.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841638|gb|EEQ31300.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 179
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK-EHCPQLQQVS-VEDIL 78
N+VL T+ER++ N Y DIPRG+++IRGENV+L+GE+D +K + P+ Q++ ++L
Sbjct: 84 TNIVLQDTVERLYAENLYADIPRGVYLIRGENVLLLGEIDLDKDDDIPEPYQLAPASEVL 143
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGLSFVPDLINDDLF 116
++K ++ ++ + + L+ L F P+ + LF
Sbjct: 144 ELRKKAEDQRKRKDKKRNTHLQ--ALGFEPEHSGEILF 179
>gi|154282047|ref|XP_001541836.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412015|gb|EDN07403.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 251
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEH--CPQLQQVSVEDIL 78
NLVL T+ER++ GN + DI RGI+++RGENV+L+GEVD +KE +Q E++
Sbjct: 156 TNLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVDLDKEDDIPTGYRQAPFEEVF 215
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGL 104
+++E +++R++ + +L+ G
Sbjct: 216 ALKKQEDNERKKRNKRSSAKLQTLGF 241
>gi|295673983|ref|XP_002797537.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280187|gb|EEH35753.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 191
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 2/85 (2%)
Query: 22 NLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEH--CPQLQQVSVEDILN 79
NLVL T+ERI+ G+ + D+ RGI+++RGENV+L+GE+D +KE +Q S +++
Sbjct: 97 NLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPAGYRQASYDEVFA 156
Query: 80 AQRKEQEVKQERSRMLAKRLKERGL 104
+++E E +++ R + +L+ G
Sbjct: 157 LKKREDEQRKKGDRRRSNKLQALGF 181
>gi|119190767|ref|XP_001245990.1| hypothetical protein CIMG_05431 [Coccidioides immitis RS]
Length = 186
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE-HCPQ-LQQVSVEDIL 78
NLVL T+ER++ GN YG+ PRG++++RGENV+L+GE+D +KE P+ +Q +++L
Sbjct: 91 TNLVLQDTVERVYSGNLYGEEPRGVYLVRGENVLLLGEIDLDKEDDIPEPYRQAPYKEVL 150
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGL 104
+++E ++ + +L+ G
Sbjct: 151 EMKQREDSERKRTDKRRGGKLQTLGF 176
>gi|303389423|ref|XP_003072944.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
gi|303302087|gb|ADM11584.1| U6 snRNA-associated small Sm-like ribonucleoprotein
[Encephalitozoon intestinalis ATCC 50506]
Length = 109
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+LRDGR L G ++S DQF ++ L K IERI +YG+ +FI+RGEN+ ++G
Sbjct: 21 VVMLRDGRYLYGVMKSFDQFNSITLDKVIERIFHDGKYGERKHELFIVRGENITMIGL-- 78
Query: 61 KEKEHCPQLQQVSVEDI 77
K E +L QV+ D+
Sbjct: 79 KSPEIAEELTQVNFWDL 95
>gi|429966262|gb|ELA48259.1| hypothetical protein VCUG_00300 [Vavraia culicis 'floridensis']
Length = 106
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
++ L DGR + G LRS DQF N+ L +T+ RI VG++Y + G++IIRGEN++L+G
Sbjct: 20 VIYLHDGRYMYGVLRSFDQFNNITLEQTVCRIFVGDEYAERRLGLYIIRGENIILIG 76
>gi|66770947|gb|AAY54785.1| IP05148p [Drosophila melanogaster]
Length = 99
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ 37
MVLLRDGRTLIGYLRSVDQFANLVL +TIERI G +
Sbjct: 39 MVLLRDGRTLIGYLRSVDQFANLVLQRTIERIPCGQR 75
>gi|358054578|dbj|GAA99504.1| hypothetical protein E5Q_06204 [Mixia osmundae IAM 14324]
Length = 95
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEV 59
+V+ DGRT++G L+ DQ N++L +IER++ + ++P G+F++RG+NV L+GE+
Sbjct: 13 LVITADGRTILGDLKGFDQTTNVILSDSIERVYSLEEPVEEVPLGLFVVRGDNVTLVGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D E+E L + E I
Sbjct: 73 DGEREREMDLSTIRAEPI 90
>gi|296816451|ref|XP_002848562.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
gi|238839015|gb|EEQ28677.1| small nuclear ribonucleoprotein LSM8 [Arthroderma otae CBS
113480]
Length = 98
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTLIG L S DQ NLVL +TIERI ++ G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLIGTLLSTDQLTNLVLSQTIERIIRTPDDPEPSSEVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKEKEHCPQLQQVSVEDILNAQ 81
GE+D+E + +V E + N +
Sbjct: 72 GEIDEEVDEKIDWSKVKGEVVRNTK 96
>gi|443922213|gb|ELU41689.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 112
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 63/96 (65%), Gaps = 10/96 (10%)
Query: 14 LRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVS 73
+ SVD NLV+ T+ERI+ G+ + DI RG+++IRGENVVL+GEV ++ P L+ V
Sbjct: 14 VESVD--TNLVMENTLERIYHGDAFADIRRGVYLIRGENVVLLGEVVNREDEVP-LRPVP 70
Query: 74 VEDILNAQRKE----QEVKQERSRMLAKRLKERGLS 105
+E+I ++E ++V+Q ++++L E+G S
Sbjct: 71 IEEIGYTHQQEADKRKQVEQAKAQIL---YDEKGFS 103
>gi|225684614|gb|EEH22898.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 191
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE-HCPQ-LQQVSVEDIL 78
NLVL T+ERI+ G+ + D+ RGI+++RGENV+L+GE+D +KE P +Q S +++
Sbjct: 96 TNLVLQGTVERIYAGHLFADVQRGIYLVRGENVLLLGEIDLDKEDDIPSGYRQASYDEVF 155
Query: 79 NAQRKEQEVKQERSRMLAKRLKERGL 104
+++E E +++ + + +L+ G
Sbjct: 156 ALKKREDEQRKKGDKRRSNKLQALGF 181
>gi|315050055|ref|XP_003174402.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
gi|311342369|gb|EFR01572.1| small nuclear ribonucleoprotein LSM8 [Arthroderma gypseum CBS
118893]
Length = 98
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTLIG L S DQ NLVL +T+ERI ++ G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSEVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|219129332|ref|XP_002184845.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403630|gb|EEC43581.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 225
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 48/73 (65%), Gaps = 9/73 (12%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIER---------IHVGNQYGDIPRGIFIIRGE 51
+++LRDG+ ++G L S DQF+NL+LH+T+ER + Y D+P G++++RG+
Sbjct: 105 LIVLRDGKHVVGTLVSYDQFSNLILHETVERRMKRCRETSTGIVTYYADVPLGLYVVRGD 164
Query: 52 NVVLMGEVDKEKE 64
++VL G + E +
Sbjct: 165 SIVLCGPLVDEDD 177
>gi|238606585|ref|XP_002396755.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
gi|215469902|gb|EEB97685.1| hypothetical protein MPER_02947 [Moniliophthora perniciosa FA553]
Length = 97
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Query: 21 ANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNA 80
NLVL T+ERI+ GN + + G+F+IRGENVVL+GE+D ++E L+QV +
Sbjct: 3 TNLVLEDTVERIYHGNAFAESWHGLFLIRGENVVLLGEIDLDQEDEVPLRQVEYNQLQPY 62
Query: 81 QRKEQEVKQERSRMLAKRLKE-RGLS 105
+ E +VK+ + + A L E +G S
Sbjct: 63 HKDEIQVKKHKDEIKAHILYETKGFS 88
>gi|451996339|gb|EMD88806.1| hypothetical protein COCHEDRAFT_1110556 [Cochliobolus
heterostrophus C5]
Length = 242
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG------DIPR---------GIF 46
VLLRD + IG LRS DQFANLVL + ERI N +PR G+
Sbjct: 116 VLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATPSSDPSVPRWLINDVKLPGVM 175
Query: 47 IIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLK 100
+RGENV + VD ++E P+ + + ED + A Q K ER + ++R K
Sbjct: 176 TVRGENVTICATVDLDREEHPRGAKFAEEDQVRALAASQ--KAERKEIDSRRAK 227
>gi|326475823|gb|EGD99832.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton tonsurans CBS
112818]
gi|326479153|gb|EGE03163.1| small nuclear ribonucleoprotein LSM8 [Trichophyton equinum CBS
127.97]
Length = 98
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTLIG L S DQ NLVL +T+ERI ++ G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|451851002|gb|EMD64303.1| hypothetical protein COCSADRAFT_199693 [Cochliobolus sativus
ND90Pr]
Length = 241
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 17/114 (14%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN------QYGDIPR---------GIF 46
VLLRD + IG LRS DQFANLVL + ERI N +PR G+
Sbjct: 115 VLLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDVTPSSDPSVPRWLINDVKLPGVM 174
Query: 47 IIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLK 100
+RGENV + VD ++E P+ + + ED + A Q K ER + ++R K
Sbjct: 175 TVRGENVTICATVDLDREEHPRGAKFAEEDQVRALAASQ--KAERKEIDSRRAK 226
>gi|156083833|ref|XP_001609400.1| U6 snRNA-associated Sm-like protein LSm8 [Babesia bovis T2Bo]
gi|154796651|gb|EDO05832.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia
bovis]
Length = 94
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR IG L+ DQ NLVL+ +ER+ G + D+P GI++IRG+N+ L+GEVD
Sbjct: 15 VVTVDGRVFIGDLKGFDQVTNLVLYNCVERVFRKGVPFEDLPLGIYLIRGDNIALVGEVD 74
Query: 61 KE 62
E
Sbjct: 75 ME 76
>gi|399216101|emb|CCF72789.1| unnamed protein product [Babesia microti strain RI]
Length = 99
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEV 59
+V+ DGR +G L DQ NL+L+++ ER++ N + + G+F+IRG+NVVL+GEV
Sbjct: 14 LVVTYDGRVFVGSLEGFDQLTNLILNQSEERVYRCNSPVERLKLGLFVIRGDNVVLIGEV 73
Query: 60 DKEKEHCPQLQQVSVEDI 77
D E + Q+S I
Sbjct: 74 DNELDFSTNFDQISASAI 91
>gi|225563396|gb|EEH11675.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 120
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 20/105 (19%)
Query: 20 FANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV-------------------- 59
ANLVL T+ER++ GN + DI RGI+++RGENV+L+GEV
Sbjct: 6 LANLVLQGTVERLYAGNLFADIQRGIYLVRGENVLLLGEVSSQHSTGILLTASIGQIQDL 65
Query: 60 DKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
DKE + +Q E++ +++E +++R++ + +L+ G
Sbjct: 66 DKEDDIPTGYRQAPFEEVFALKKQEDNERKKRNKRSSAKLQTLGF 110
>gi|119184377|ref|XP_001243108.1| hypothetical protein CIMG_07004 [Coccidioides immitis RS]
gi|303320353|ref|XP_003070176.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240109862|gb|EER28031.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320041233|gb|EFW23166.1| small nuclear ribonucleoprotein Lsm8 [Coccidioides posadasii str.
Silveira]
gi|392865995|gb|EAS31853.2| small nuclear ribonucleoprotein Lsm8 [Coccidioides immitis RS]
Length = 98
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTLIG L S DQ NLVL +T+ERI ++ G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLIGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GE+D+E
Sbjct: 72 GEIDEE 77
>gi|226291299|gb|EEH46727.1| splicing factor [Paracoccidioides brasiliensis Pb18]
Length = 208
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|240278846|gb|EER42352.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus
H143]
gi|325090103|gb|EGC43413.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces capsulatus H88]
Length = 94
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ----YGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + + G+++IRG+NVV+
Sbjct: 8 LILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTSDDPEPSSQVEHGLYLIRGDNVVIC 67
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 68 GEVDEE 73
>gi|225679568|gb|EEH17852.1| splicing factor [Paracoccidioides brasiliensis Pb03]
Length = 98
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|327293992|ref|XP_003231692.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
gi|326466320|gb|EGD91773.1| small nuclear ribonucleoprotein Lsm8 [Trichophyton rubrum CBS
118892]
Length = 98
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTL+G L S DQ NLVL +T+ERI ++ G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLLGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSTEVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|225560095|gb|EEH08377.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 98
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|154288024|ref|XP_001544807.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408448|gb|EDN03989.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 94
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + G+++IRG+NVV+
Sbjct: 8 LILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVVIC 67
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 68 GEVDEE 73
>gi|396464109|ref|XP_003836665.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
gi|312213218|emb|CBX93300.1| hypothetical protein LEMA_P042010.1 [Leptosphaeria maculans JN3]
Length = 230
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG------DIPR---------GIF 46
+LLRD + IG LRS DQFANLVL + ERI N IPR GI
Sbjct: 104 ILLRDEKEYIGILRSYDQFANLVLTECYERIAARNPDATPSSDPSIPRWLIHDVKLPGIM 163
Query: 47 IIRGENVVLMGEVDKEKEHCPQLQQVS-VEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
IRGENV + VD ++E P+ + V+ + ++ K+E AK L++ G+
Sbjct: 164 TIRGENVTICATVDLDREESPRGATFADVDQVRTLAASQKAEKKETDGRKAKVLRQAGI 222
>gi|156053235|ref|XP_001592544.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980]
gi|154704563|gb|EDO04302.1| hypothetical protein SS1G_06785 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L D RTL+G L S DQ NLVL +TIERI ++P G+++IRG+NVV++
Sbjct: 12 LILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDPEASSEVPHGLYLIRGDNVVVV 71
Query: 57 GEVDKE 62
G VD+E
Sbjct: 72 GLVDEE 77
>gi|261203457|ref|XP_002628942.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239586727|gb|EEQ69370.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
SLH14081]
gi|239608242|gb|EEQ85229.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ER-3]
gi|327349430|gb|EGE78287.1| small nuclear ribonucleoprotein Lsm8 [Ajellomyces dermatitidis
ATCC 18188]
Length = 98
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL +T+ERI + G+++IRG+NVV+
Sbjct: 12 IILTVDGRTLIGTLLSTDQLTNLVLSQTVERIIRTPDDPEPSSQVEHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GEVD+E
Sbjct: 72 GEVDEE 77
>gi|169608576|ref|XP_001797707.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
gi|111063716|gb|EAT84836.1| hypothetical protein SNOG_07370 [Phaeosphaeria nodorum SN15]
Length = 234
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD------IPR---------GIF 46
VLLRD + IG LRS DQFANLVL + ERI N + +PR G+
Sbjct: 107 VLLRDEKEYIGILRSYDQFANLVLTECHERIAARNPDAEPSSAPSVPRWLIHDVKLPGVM 166
Query: 47 IIRGENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEV-KQERSRMLAKRLKERGL 104
IRGENV + VD ++E P+ + + D + A Q+ K++ AK LK G+
Sbjct: 167 TIRGENVTICATVDLDREDAPRGARFADVDEVRALAAAQKAEKRDVDTRKAKALKAAGI 225
>gi|328766541|gb|EGF76595.1| hypothetical protein BATDEDRAFT_92607 [Batrachochytrium
dendrobatidis JAM81]
Length = 97
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+ DGR ++G L DQ NL+L ERI G D+P G++++RG+++ ++G VD+
Sbjct: 14 VVTNDGRVILGKLEGFDQTTNLILSSAKERIFSGEGSQDLPLGLYVVRGDSITVVGLVDE 73
Query: 62 EKEHCPQLQQVSVEDILNAQRK 83
E++ Q V E I R
Sbjct: 74 EQDAQIQWATVLAEPIAPVPRT 95
>gi|428671909|gb|EKX72824.1| U6 snRNA-associated Sm-like protein LSm8, putative [Babesia equi]
Length = 94
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEV 59
V+ DGR +G L+ DQ NLVL+ IER+ HV + ++ GI+++RG+NVVL+GEV
Sbjct: 14 FVISVDGRVFVGVLKGFDQLTNLVLYNCIERVYHVDSPVEELELGIYVVRGDNVVLVGEV 73
Query: 60 D 60
D
Sbjct: 74 D 74
>gi|258568848|ref|XP_002585168.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906614|gb|EEP81015.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 98
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTL G L S DQ NLVL +T+ERI ++ G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLTGTLLSTDQLTNLVLSETVERIIRPPDDPEPSSEVDHGLYLIRGDNVVIC 71
Query: 57 GEVDKE 62
GE+D+E
Sbjct: 72 GEIDEE 77
>gi|111226386|ref|XP_001134524.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|121962459|sp|Q1ZXD5.1|NAA38_DICDI RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=Probable U6 snRNA-associated
Sm-like protein LSm8
gi|90970532|gb|EAS66841.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 94
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VL DGR++IG LR +DQ N+VL K ER++ IP G+ +I+G++V ++GEVD
Sbjct: 13 LVLTADGRSIIGTLRGIDQTINVVLEKCHERVYSDEGIEVIPLGVHLIKGDDVAVIGEVD 72
Query: 61 KEKEHCPQLQQVSVE 75
E + L+++ E
Sbjct: 73 DELDKKLNLKEIIAE 87
>gi|66356716|ref|XP_625536.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
gi|46226537|gb|EAK87525.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum Iowa II]
Length = 160
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+LRDGR G RS DQ+ +L L ++ E + Y +I +G I RG+N++L G +D+
Sbjct: 56 VVLRDGRQFTGIFRSFDQYGSLCLERSFEVFSNNDCYNEIYQGCMIFRGDNLMLCGLIDQ 115
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSR 93
+ +++ + DIL +++E+ +K S
Sbjct: 116 NIKS-YNAKKIPLADILKIKQEEKNLKSINSN 146
>gi|154314610|ref|XP_001556629.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347831950|emb|CCD47647.1| similar to small nuclear ribonucleoprotein Lsm8 [Botryotinia
fuckeliana]
Length = 98
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ----YGDIPRGIFIIRGENVVLM 56
++L D RTL+G L S DQ NLVL +TIERI + ++P G+++IRG+NVV++
Sbjct: 12 LILTADSRTLVGTLLSCDQQTNLVLSQTIERIIRPPEDIEASSEVPHGLYLIRGDNVVVV 71
Query: 57 GEVDKE 62
G VD+E
Sbjct: 72 GLVDEE 77
>gi|391345950|ref|XP_003747244.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Metaseiulus occidentalis]
Length = 96
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR +G L+ DQ N++L ++ ER+ V + +P G++IIRGENVVL+GE+D
Sbjct: 15 VVTADGRNFVGTLKGFDQTINIILQESHERVFSVQDGVQKVPMGLYIIRGENVVLVGELD 74
Query: 61 KEKEHCPQLQQVSVE 75
+E E L E
Sbjct: 75 EEIEKSIDLTSTRAE 89
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V+ DGR LIG L+ DQ N++L T+ERI G ++ G++++RG+++ ++GE+
Sbjct: 14 VVTNDGRILIGILKGFDQSCNVILESTVERIF-GTDVAMQEVAVGLYVLRGDDIAILGEL 72
Query: 60 DKEKEHCPQLQQV 72
D EKE QQ+
Sbjct: 73 DAEKESETDFQQI 85
>gi|440465117|gb|ELQ34457.1| hypothetical protein OOU_Y34scaffold00765g3 [Magnaporthe oryzae
Y34]
gi|440480508|gb|ELQ61168.1| hypothetical protein OOW_P131scaffold01199g49 [Magnaporthe oryzae
P131]
Length = 153
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 18/97 (18%)
Query: 22 NLVLHKTIERIHVGNQ--------YGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQ--- 70
NLVL T+ER+ V Y DI RG+F++RGENV+L+GE+D +K+ P
Sbjct: 51 NLVLQSTVERLFVPPSPSTGERGLYADISRGLFLVRGENVLLLGEIDLDKDDDPPAGYDK 110
Query: 71 ---QVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
QV VE +L A++ E + K E+SR+ K+L G
Sbjct: 111 AELQV-VESLLKARKAEDKAK-EKSRL--KKLASLGF 143
>gi|397601577|gb|EJK57942.1| hypothetical protein THAOC_21966, partial [Thalassiosira oceanica]
Length = 306
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 20/81 (24%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIER-----IHVGNQYGD-----IPR------- 43
+V+LRDGR L+G L++ DQFAN+V+ T ER + GD P+
Sbjct: 177 LVILRDGRHLVGVLKTFDQFANMVMQDTAERRILVVKRADEKDGDSETNSAPKSICYQTD 236
Query: 44 ---GIFIIRGENVVLMGEVDK 61
G+FI+RG+NVVLMGEVD+
Sbjct: 237 IMLGLFIVRGDNVVLMGEVDE 257
>gi|70995556|ref|XP_752533.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus fumigatus
Af293]
gi|119495627|ref|XP_001264594.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|41581243|emb|CAE47892.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850168|gb|EAL90495.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
fumigatus Af293]
gi|119412756|gb|EAW22697.1| small nuclear ribonucleoprotein (LSM8), putative [Neosartorya
fischeri NRRL 181]
gi|159131288|gb|EDP56401.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
fumigatus A1163]
Length = 98
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVVL
Sbjct: 12 LILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVLC 71
Query: 57 GEVDK 61
GEVD+
Sbjct: 72 GEVDE 76
>gi|212542651|ref|XP_002151480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
gi|210066387|gb|EEA20480.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
marneffei ATCC 18224]
Length = 98
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+V+ DGRTL+G L S DQ NLVL +T+ERI +I G+++IRG+NVV+
Sbjct: 12 LVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPEDPEPSSEIEHGLYLIRGDNVVVC 71
Query: 57 GEVDK 61
GEVD+
Sbjct: 72 GEVDE 76
>gi|242769181|ref|XP_002341717.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724913|gb|EED24330.1| small nuclear ribonucleoprotein Lsm8, putative [Talaromyces
stipitatus ATCC 10500]
Length = 98
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+V+ DGRTL+G L S DQ NLVL +T+ERI +I G+++IRG+NVV+
Sbjct: 12 LVITVDGRTLLGTLLSTDQLTNLVLTQTVERIIRTPDDPEPSSEIEHGLYLIRGDNVVIC 71
Query: 57 GEVDK 61
GEVD+
Sbjct: 72 GEVDE 76
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G LR DQ NL+L + ER++ + + P G++IIRG+N+ ++GE+D
Sbjct: 15 VITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLYIIRGDNIAVIGEID 74
Query: 61 KEKEHCPQLQQV 72
E + Q+
Sbjct: 75 DEMDANLDYSQI 86
>gi|121701687|ref|XP_001269108.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
gi|119397251|gb|EAW07682.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus
clavatus NRRL 1]
Length = 98
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVVL
Sbjct: 12 LILTVDGRTLLGTLLSTDQLTNLVLVDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVLC 71
Query: 57 GEVDK 61
GE+D+
Sbjct: 72 GEIDE 76
>gi|440492571|gb|ELQ75126.1| Small Nuclear ribonucleoprotein splicing factor
[Trachipleistophora hominis]
Length = 106
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
++ L DGR + G LRS DQF N+ L +T+ RI + ++Y + G+ +IRGEN++L+G
Sbjct: 20 VIYLHDGRYMYGILRSFDQFNNITLEQTVCRIFIDDEYAERRLGLHVIRGENIILIG 76
>gi|425767233|gb|EKV05807.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum PHI26]
gi|425780084|gb|EKV18104.1| U6 snrna-associated sm-like protein, putative [Penicillium
digitatum Pd1]
Length = 108
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL T+ERI +I G+++IRG+NVV+
Sbjct: 22 LILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPDDDEPSTEIEHGLYLIRGDNVVIC 81
Query: 57 GEVDKE 62
GE+D++
Sbjct: 82 GEIDEK 87
>gi|317155545|ref|XP_003190622.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus oryzae RIB40]
Length = 98
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+VL DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVV+
Sbjct: 12 LVLTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVVC 71
Query: 57 GEVDKE 62
GEVD++
Sbjct: 72 GEVDEK 77
>gi|145239729|ref|XP_001392511.1| small nuclear ribonucleoprotein (LSM8) [Aspergillus niger CBS
513.88]
gi|134077023|emb|CAK39897.1| unnamed protein product [Aspergillus niger]
gi|350629638|gb|EHA18011.1| hypothetical protein ASPNIDRAFT_38383 [Aspergillus niger ATCC
1015]
Length = 98
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
+L DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVVL G
Sbjct: 13 ILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVLCG 72
Query: 58 EVDK 61
EVD+
Sbjct: 73 EVDE 76
>gi|358372807|dbj|GAA89408.1| small nuclear ribonucleoprotein Lsm8 [Aspergillus kawachii IFO
4308]
Length = 105
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
+L DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVVL G
Sbjct: 20 ILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVLCG 79
Query: 58 EVDK 61
EVD+
Sbjct: 80 EVDE 83
>gi|255936991|ref|XP_002559522.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584142|emb|CAP92172.1| Pc13g11030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 98
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTLIG L S DQ NLVL T+ERI +I G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLIGDLLSTDQTTNLVLANTVERIIRTPEDDEPSTEIEHGLYLIRGDNVVVC 71
Query: 57 GEVDKE 62
GE+D++
Sbjct: 72 GEIDEK 77
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-NQYGDIPRGIFIIRGENVVLMGEVD 60
V+ DGRT++G LR DQ NL+L + ER++ N + G+++IRG+N+ ++GE+D
Sbjct: 20 VITNDGRTIVGTLRGYDQATNLILDECHERVYSSKNGVEQLVLGLYVIRGDNIAVIGEID 79
Query: 61 KEKEHCPQLQQV 72
+K+ QV
Sbjct: 80 DDKDASIDFNQV 91
>gi|115491675|ref|XP_001210465.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197325|gb|EAU39025.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 98
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
++L DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVV+
Sbjct: 12 LILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVVC 71
Query: 57 GEVDK 61
GEVD+
Sbjct: 72 GEVDE 76
>gi|378754575|gb|EHY64606.1| hypothetical protein NERG_02416 [Nematocida sp. 1 ERTm2]
Length = 109
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGE-- 58
V++RDG+ ++G LRS DQ+ N++L + E +Y I ++RGEN++L+GE
Sbjct: 23 FVVMRDGKYMVGTLRSYDQYYNILLEDSTEYTTSSTEYSSIESESVLLRGENIILLGEGT 82
Query: 59 -VDKEKEHCPQLQQ 71
+E E P++ +
Sbjct: 83 FSHEEMEKVPEITE 96
>gi|361128364|gb|EHL00305.1| putative U6 snRNA-associated Sm-like protein LSm1 [Glarea
lozoyensis 74030]
Length = 235
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 12/89 (13%)
Query: 21 ANLVLHKTIERIHVG------NQYGDIPRGIFIIRGENVVLMGEVDKEK-EHCPQLQQVS 73
NLVL TIERI + Y D PRGIF++RGENV+L+GE+D +K + P+ +
Sbjct: 134 TNLVLQSTIERIFIPPTPSTPGYYADFPRGIFLVRGENVLLLGEIDLDKDDDVPEGYERG 193
Query: 74 VEDI---LNAQRKEQEVKQERSRMLAKRL 99
+ L+ +RK +E + R R++ KRL
Sbjct: 194 EPGMVQRLDKERKGREAR--RERVVKKRL 220
>gi|171687845|ref|XP_001908863.1| hypothetical protein [Podospora anserina S mat+]
gi|170943884|emb|CAP69536.1| unnamed protein product [Podospora anserina S mat+]
Length = 144
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ DGRTL+G L + D NLVL TIERI +P G+++IRGENV +G
Sbjct: 60 IITTDGRTLVGTLAAYDNTTNLVLQNTIERIIRTPDDAEPSAQVPLGLYLIRGENVCTIG 119
Query: 58 EVDK 61
VD+
Sbjct: 120 LVDE 123
>gi|440804396|gb|ELR25273.1| u6 snrnaassociated sm-like protein lsm8, putative [Acanthamoeba
castellanii str. Neff]
Length = 94
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 43/61 (70%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
++ D R+++G LR DQFAN+++ + ER++ +P G+++IRG+N+ ++GE+++
Sbjct: 14 IITSDARSIVGTLRGFDQFANVIVEDSHERVYSAQGMEKVPLGLYVIRGDNIAVIGELNE 73
Query: 62 E 62
+
Sbjct: 74 Q 74
>gi|330842842|ref|XP_003293378.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
gi|325076293|gb|EGC30091.1| hypothetical protein DICPUDRAFT_90215 [Dictyostelium purpureum]
Length = 94
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+VL DGR +IG LR DQ N++L K ER+ IP G+ +I+G++V ++GEVD
Sbjct: 13 LVLTADGRNIIGILRGTDQTTNVILEKCEERVFSDEGIEVIPLGVHLIKGDDVAVIGEVD 72
Query: 61 KEKEHCPQLQQVSVE 75
+E + L++ E
Sbjct: 73 EELDRNLNLKETIAE 87
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V+ +DGRT+ G L+ DQ N++L ++ER++ ++ ++P G++I+RG+++ ++GE+
Sbjct: 67 LVITQDGRTITGELKGFDQTTNIILSDSVERVYSSDEPMEEVPLGLYIVRGDHISVIGEL 126
Query: 60 DKEKE 64
D E +
Sbjct: 127 DVEAD 131
>gi|401826479|ref|XP_003887333.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392998492|gb|AFM98352.1| LSM domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 107
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V+LRDGR L G ++S DQF ++ L IERI +Y + +FIIRGEN+ ++G
Sbjct: 21 VVMLRDGRYLYGIMKSFDQFNSITLDGVIERIFHDGKYAERKHELFIIRGENITMIG 77
>gi|196004032|ref|XP_002111883.1| hypothetical protein TRIADDRAFT_23559 [Trichoplax adhaerens]
gi|190585782|gb|EDV25850.1| hypothetical protein TRIADDRAFT_23559, partial [Trichoplax
adhaerens]
Length = 84
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-GNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ +DGR ++G L+ DQ NL+L+ + ER++ G + G+++IRG+N+ ++GE+D
Sbjct: 3 VITQDGRVIVGTLKGFDQTVNLILNDSHERVYSSGAGVEQVALGLYVIRGDNIAVIGEID 62
Query: 61 KEKEHCPQLQQVSVEDI 77
++ + L +V E I
Sbjct: 63 EDVDSSIDLAEVKAEPI 79
>gi|406603277|emb|CCH45205.1| Sm-like protein LSm1 [Wickerhamomyces ciferrii]
Length = 154
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V L DGR L G LR+ DQ+ + L N+YG+ G+ +IRGEN+V++G+VD
Sbjct: 50 VTLTDGRHLFGVLRTFDQYGKIYLSD--------NRYGEEYVGVLLIRGENIVIIGDVDI 101
Query: 62 EKEHCP--QLQQVSVEDILNAQRKEQE 86
+KE P +L ++ D Q++ Q+
Sbjct: 102 DKEDEPLSRLTRIPFPDAKQLQKQSQD 128
>gi|167519032|ref|XP_001743856.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777818|gb|EDQ91434.1| predicted protein [Monosiga brevicollis MX1]
Length = 92
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI---HVGNQYGDIPRGIFIIRGENVVLMGE 58
+ +DGR L G L+ DQ NL+L++ ER+ H G + +P G++I+RG+NV ++GE
Sbjct: 11 IATQDGRLLTGILKGFDQSTNLILNQCYERVFSLHSGVEI--VPMGLYIVRGDNVAVVGE 68
Query: 59 VDKEKEHCPQLQQV 72
D+E + L+ V
Sbjct: 69 TDEETDATLDLENV 82
>gi|396081451|gb|AFN83068.1| U6 snRNA-associated small Sm-like protein [Encephalitozoon
romaleae SJ-2008]
Length = 107
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V+LRDGR L G ++S DQF ++ L + IERI +Y + +FIIRGEN+ ++G
Sbjct: 21 VVVLRDGRYLYGIMKSFDQFNSITLDRVIERIFHDEKYAERKHELFIIRGENITMIG 77
>gi|336388555|gb|EGO29699.1| hypothetical protein SERLADRAFT_378975 [Serpula lacrymans var.
lacrymans S7.9]
Length = 95
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR+++G + DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GE+
Sbjct: 13 LLILQDGRSIVGIMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIGEI 72
Query: 60 DKEKEHCPQLQQVSVE 75
D E + L + E
Sbjct: 73 DDEADQAVDLATIRAE 88
>gi|402469076|gb|EJW04137.1| hypothetical protein EDEG_01573 [Edhazardia aedis USNM 41457]
Length = 105
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
++L+ +G+ L G LRS DQ+ ++ L TIER+ +Y + G++I+RGEN+V++G
Sbjct: 25 VILMWEGKYLYGKLRSFDQYNSITLENTIERVFNNGKYTERKCGLYIVRGENIVIIG 81
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G LR DQ NL+L + ER+ +Q + IP G++IIRGENV ++G VD
Sbjct: 13 VITNDGRCVLGSLRGFDQTTNLILSNSKERLISWDQETEVIPLGLYIIRGENVAMVGLVD 72
Query: 61 KE 62
++
Sbjct: 73 QQ 74
>gi|398411265|ref|XP_003856974.1| hypothetical protein MYCGRDRAFT_19618, partial [Zymoseptoria
tritici IPO323]
gi|339476859|gb|EGP91950.1| hypothetical protein MYCGRDRAFT_19618 [Zymoseptoria tritici
IPO323]
Length = 89
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+LL DGR LIG L + D NL L +ERI + PRG+F++RG+NVVL
Sbjct: 4 CLLLTDGRCLIGDLIACDAVTNLALENCVERIIRSADEDEASEEEPRGLFMVRGDNVVLC 63
Query: 57 GEVDKEKEHCPQLQQVSVEDI 77
G VD+E + +V E+I
Sbjct: 64 GLVDEELDGSIDWTKVRGEEI 84
>gi|403412047|emb|CCL98747.1| predicted protein [Fibroporia radiculosa]
Length = 439
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR++IG + DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GEV
Sbjct: 357 LLILQDGRSIIGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIGEV 416
Query: 60 DKEKEHCPQLQQVSVEDI 77
++ + L + E +
Sbjct: 417 NEALDQSVDLATIRAEPL 434
>gi|392561866|gb|EIW55047.1| LSM-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 95
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GEV
Sbjct: 13 LLILQDGRAIVGVMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIGEV 72
Query: 60 DKEKEHCPQLQQVSVE 75
D+ ++ L + E
Sbjct: 73 DEAADNAVDLSTIHAE 88
>gi|403412868|emb|CCL99568.1| predicted protein [Fibroporia radiculosa]
Length = 95
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR+++G + DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GEV
Sbjct: 13 LLILQDGRSIVGVMAGYDQKSNVVLSDSKERVYSADEGVEEIPLGLYLVKGDQIVLIGEV 72
Query: 60 DKEKEHCPQLQQVSVE 75
D+ + L + E
Sbjct: 73 DEAIDQSVDLATIRAE 88
>gi|302680881|ref|XP_003030122.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
gi|300103813|gb|EFI95219.1| hypothetical protein SCHCODRAFT_16460 [Schizophyllum commune
H4-8]
Length = 95
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGRT++G L DQ +N++L + ER++ ++ +IP G++I++G+ + L+GE+
Sbjct: 13 LLVLQDGRTIVGVLAGFDQKSNIILSECRERVYSMDEGVEEIPLGLYIVKGDMICLIGEI 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D +++ + + E I
Sbjct: 73 DNDRDAAIDISTIRAEPI 90
>gi|238498242|ref|XP_002380356.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
gi|220693630|gb|EED49975.1| small nuclear ribonucleoprotein Lsm8, putative [Aspergillus
flavus NRRL3357]
Length = 85
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 6 DGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
DGRTL+G L S DQ NLVL TIERI I G+++IRG+NVV+ GEVD+
Sbjct: 4 DGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGLYLIRGDNVVVCGEVDE 63
Query: 62 E 62
+
Sbjct: 64 K 64
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L+++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|19173671|ref|NP_597474.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|19170877|emb|CAD26651.1| U6 snRNA-ASSOCIATED SMALL RIBONUCLEOPROTEIN (Sm-LIKE PROTEIN)
[Encephalitozoon cuniculi GB-M1]
gi|449329221|gb|AGE95495.1| U6 snRNA-associated small ribonucleoprotein [Encephalitozoon
cuniculi]
Length = 102
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V+LRDGR L G ++S DQF ++ L IERI +Y + +FIIRGEN+ ++G
Sbjct: 21 VVMLRDGRYLYGVMKSFDQFNSVTLDGVIERIFHDTRYAERRHELFIIRGENITMIG 77
>gi|403355067|gb|EJY77101.1| hypothetical protein OXYTRI_01268 [Oxytricha trifallax]
Length = 319
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR---GIFIIRGENVVLMGE 58
V+ DGR IG L S DQ NL+L IERI++ N D+ G+F IRG+NV L+ E
Sbjct: 237 VITNDGRNFIGTLVSFDQKTNLILSACIERIYIENH--DVQAEEMGVFFIRGDNVCLIAE 294
Query: 59 VDKEKE 64
+D+ E
Sbjct: 295 IDENLE 300
>gi|145349245|ref|XP_001419048.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579279|gb|ABO97341.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V+ DGR ++G LR DQ N++L ER++ ++ G + P G+++IRG+NV L+G V
Sbjct: 16 VITNDGRHIVGTLRGFDQVTNVILEDCAERVY-SSESGVEEAPLGVYMIRGDNVALVGPV 74
Query: 60 DKE 62
D+E
Sbjct: 75 DEE 77
>gi|389747909|gb|EIM89087.1| Sm-like ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 95
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL + ER++ ++ +IP G+++++G+ ++L+GE+
Sbjct: 13 LLILQDGRAIVGIMAGYDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIILIGEI 72
Query: 60 DKEKEHCPQLQQV 72
D+E+++ L +
Sbjct: 73 DEEQDNALDLSTI 85
>gi|219114825|ref|XP_002178208.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409943|gb|EEC49873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 86
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEV 59
V+ DGR ++G L DQ NL+L+ ER++ V ++P G++++RG+NV L+ EV
Sbjct: 4 CVVTSDGRIIVGILTGYDQVQNLILNDAHERVYSVDADVEEVPLGLYVVRGDNVCLVAEV 63
Query: 60 DKEKE 64
D+ K+
Sbjct: 64 DETKQ 68
>gi|393213825|gb|EJC99320.1| Sm-like ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 95
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGRT++G L DQ +++VL +ERI+ + ++P G+++++G+ ++L+GE+
Sbjct: 13 LLVLQDGRTIVGVLAGFDQRSDIVLSDCVERIYSMEEGVEEVPLGLYLVKGDQILLIGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+ + L V E I
Sbjct: 73 DEALDKAVDLSTVRAEPI 90
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L+++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILNESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSVLDLGNIRAE 89
>gi|388854537|emb|CCF51924.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Ustilago hordei]
Length = 96
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V+ +DGR ++G L+ D +++L ++ERI +Q ++P G++I+RG+ + L+G++
Sbjct: 13 LVITQDGRVIVGLLKGSDSVGSIILANSVERIFSSDQGVEELPLGLYILRGDGISLVGQL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D EK+ L V E I
Sbjct: 73 DVEKDKEVDLSSVLAEPI 90
>gi|403223040|dbj|BAM41171.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 94
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEV 59
V+ DGR +G L+ DQ NLVL+ +ER+ H ++ G++I+RG+NVVL+GEV
Sbjct: 14 FVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPEAPVEELELGVYILRGDNVVLVGEV 73
Query: 60 D 60
D
Sbjct: 74 D 74
>gi|449304976|gb|EMD00983.1| hypothetical protein BAUCODRAFT_118700 [Baudoinia compniacensis
UAMH 10762]
Length = 98
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI--HVGNQYGDI--PRGIFIIRGENVVLM 56
++ DGRTL G L S DQ N+VL TIERI ++ I P G++++RG+NVV+
Sbjct: 12 CIITVDGRTLTGTLVSCDQVTNVVLKDTIERIIRPTDDEEPSIEQPHGLYLVRGDNVVIC 71
Query: 57 GEVDKEKEHCPQLQQV 72
G VD+E ++ +V
Sbjct: 72 GLVDEELDNSIDWTKV 87
>gi|378729237|gb|EHY55696.1| hypothetical protein HMPREF1120_03821 [Exophiala dermatitidis
NIH/UT8656]
Length = 98
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+V+ DGRTL+G L S DQ N+VL+ T+ERI + G++++RG+N+ ++
Sbjct: 12 LVITVDGRTLVGTLLSCDQVTNIVLNDTVERIIRPTDDPEPSSQVSHGLYLVRGDNITIV 71
Query: 57 GEVDKEKEHCPQLQQV 72
G VD+E ++ ++V
Sbjct: 72 GLVDEELDNSIDWEKV 87
>gi|169851696|ref|XP_001832537.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
gi|116506391|gb|EAU89286.1| hypothetical protein CC1G_03551 [Coprinopsis cinerea
okayama7#130]
Length = 95
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G L DQ +N+VL + ER+ ++ +IP G+++++G+ ++L+GE+
Sbjct: 13 VLILQDGRVIVGLLAGFDQKSNVVLSDSKERVFSTDEGVEEIPLGLYLVKGDMIILIGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+E + L + E I
Sbjct: 73 DEEIDKTTDLSTIRAEPI 90
>gi|367043690|ref|XP_003652225.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
gi|346999487|gb|AEO65889.1| hypothetical protein THITE_2087360 [Thielavia terrestris NRRL
8126]
Length = 97
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ DGR L+G L + D NLVL T+ER+ G ++P G++IIRGENV L+G
Sbjct: 13 IITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRTPDEGEPSVEVPLGLYIIRGENVCLVG 72
Query: 58 EVDK 61
VD+
Sbjct: 73 LVDE 76
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-GIFIIRGENVVLMGEVD 60
++L DGR++IG LR DQ +N+VL +++ERI+ + D + G+++++G+ + L+GE+D
Sbjct: 14 LVLTDGRSIIGTLRGYDQKSNIVLSESVERIYSADSGVDEAQLGLYLVKGDTIALIGELD 73
Query: 61 KEKEHCPQLQQVSVEDI 77
+ + L + + I
Sbjct: 74 EAMDKAVPLDSIRADPI 90
>gi|392575745|gb|EIW68877.1| hypothetical protein TREMEDRAFT_39244 [Tremella mesenterica DSM
1558]
Length = 94
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 45/74 (60%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+L DGR ++G LR D NL+L +ER + +P G+++I+G+NV ++GE+D+
Sbjct: 14 VILYDGRVIVGKLRGYDPRTNLILSDCVEREYSLEGVEMVPLGLYMIKGDNVAIIGEMDE 73
Query: 62 EKEHCPQLQQVSVE 75
+K+ ++ E
Sbjct: 74 DKDGSIDYTEIKAE 87
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 19 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 78
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 79 EETDSALDLGNIRAE 93
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora larici-populina
98AG31]
Length = 124
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V+ +DGRT+ G L+ DQ N++L ++IER++ ++ ++P G++++RG+++ ++GE+
Sbjct: 42 LVITQDGRTITGDLKGFDQTTNIILSESIERVYSADEPMEEVPLGLYVVRGDHISVIGEL 101
Query: 60 D 60
D
Sbjct: 102 D 102
>gi|392589005|gb|EIW78336.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 95
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR+++G L DQ AN+VL + ER++ + +IP G+++++G+ +VL+GE+
Sbjct: 13 LLVLQDGRSIVGVLAGFDQKANVVLSDSKERVYSLEEGVEEIPLGLYLVKGDMIVLIGEI 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D + L + E I
Sbjct: 73 DDAVDSSVDLSTIRAEPI 90
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 45 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 104
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 105 EETDSALDLGNIRAE 119
>gi|390599071|gb|EIN08468.1| LSM-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 95
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR+++G L DQ +N+VL + ERI+ ++ ++P G+++++G+ + L+GE+
Sbjct: 13 LLVLQDGRSIVGTLSGFDQKSNVVLSDSTERIYSTDEGVEEVPLGLYLVKGDMIALIGEL 72
Query: 60 DKEKEHCPQLQQVSVE 75
D+ + L V E
Sbjct: 73 DEAIDKSVDLSTVRAE 88
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 8 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 67
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 68 EETDSALDLGNIRAE 82
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVKQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSVLDLGNIRTE 89
>gi|358332137|dbj|GAA50846.1| U6 snRNA-associated Sm-like protein LSm8 [Clonorchis sinensis]
Length = 85
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGRT++G L+ D NLV+ + ER+ + +P G+FIIRG+NV L+GE+D
Sbjct: 4 VITADGRTIVGTLKGFDNVINLVIKDSQERVFSPTEGVEQVPLGLFIIRGQNVALVGEID 63
Query: 61 KE 62
++
Sbjct: 64 ED 65
>gi|146168016|ref|XP_001470817.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|146145232|gb|EDK31689.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 107
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG-NQYGDIPRGIFIIRGENVVLMGEVD 60
++ DG+ LIG L+ +DQ N +L +ER+ N I G++++RG+N+ ++GEVD
Sbjct: 27 IITTDGKVLIGILKGLDQALNSILSDCVERVFSSENNTKTIKHGLYLLRGDNIAVLGEVD 86
Query: 61 KEKEH 65
+E E+
Sbjct: 87 EEIEN 91
>gi|354486322|ref|XP_003505330.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cricetulus griseus]
Length = 121
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 40 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 99
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 100 EETDSALDLGNIRAE 114
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++IIRG+N+ ++GE+D
Sbjct: 15 VVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIIRGDNIAVVGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
E ++ L + E
Sbjct: 75 DETDNSLDLANIKAE 89
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|71027589|ref|XP_763438.1| U6 snRNA-associated Sm-like protein LSm8 [Theileria parva strain
Muguga]
gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria
parva]
Length = 94
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEV 59
V+ DGR +G L+ DQ NLVL+ +ER+ H ++ GI+++RG+N+VL+GEV
Sbjct: 14 FVISVDGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNIVLVGEV 73
Query: 60 D 60
D
Sbjct: 74 D 74
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 VITADGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSSLDLGNIRAE 89
>gi|443897860|dbj|GAC75199.1| hypothetical protein PANT_14d00082 [Pseudozyma antarctica T-34]
Length = 160
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V+ +DGR ++G LR D +++L ++ERI ++ ++P G++I+RG+ + L+G V
Sbjct: 13 LVITQDGRVIVGTLRGSDAVGSIILAASVERIFSPDEGVEEVPLGLYILRGDAICLVGLV 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D EK+ L + E I
Sbjct: 73 DVEKDKAIDLATLMAEPI 90
>gi|409048518|gb|EKM57996.1| hypothetical protein PHACADRAFT_251944 [Phanerochaete carnosa
HHB-10118-sp]
Length = 95
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL + ER++ + +IP G+++++G+ +V++GE+
Sbjct: 13 LLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSTEEGVEEIPLGLYLVKGDQIVVIGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+ + L + E I
Sbjct: 73 DEAADQAVDLSTIRAEPI 90
>gi|339248315|ref|XP_003375791.1| putative LSM domain protein [Trichinella spiralis]
gi|316970790|gb|EFV54665.1| putative LSM domain protein [Trichinella spiralis]
Length = 184
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR ++G ++ DQ NLVL + ER++ N +P G+++IRGEN+ ++GE+D
Sbjct: 102 IITGDGRHIVGIMKGFDQTINLVLEDSHERVYSMNHGVEQVPLGLYVIRGENIAVVGEID 161
Query: 61 KE 62
++
Sbjct: 162 ED 163
>gi|320170227|gb|EFW47126.1| hypothetical protein CAOG_05070 [Capsaspora owczarzaki ATCC
30864]
Length = 95
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGE 58
+V DGR +G LR DQ N++L T+ER Q G + G++II+GEN+ ++G
Sbjct: 13 LVATTDGRIFVGTLRGFDQMCNIILEHTVER-EFNAQRGVVIVALGLYIIKGENIAVVGS 71
Query: 59 VDKEKEHCPQLQQV 72
VD E + L Q+
Sbjct: 72 VDPEIDESMDLSQI 85
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+L+DGR ++G L+ D NL+L ++ER +Q + IP G+++I+G+NV ++ E+D
Sbjct: 14 VILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMDQGVEMIPLGLYVIKGDNVAVVAELD 73
Query: 61 KEKEHCPQLQQVSVE 75
+EK+ + E
Sbjct: 74 EEKDSTINYNDIRAE 88
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
++ DGR ++G L+ DQ NL+L ++ ER++ + +G +P G++I+RG+NVV++G+V
Sbjct: 15 IITADGRHIVGTLKGFDQTINLILDESHERVY-SSDHGVEQVPLGLYIVRGDNVVVVGQV 73
Query: 60 DKE 62
D E
Sbjct: 74 DDE 76
>gi|367020158|ref|XP_003659364.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
gi|347006631|gb|AEO54119.1| hypothetical protein MYCTH_2296291 [Myceliophthora thermophila
ATCC 42464]
Length = 97
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ DGR L+G L + D NLVL T+ER+ G ++P G++I+RGENV ++G
Sbjct: 13 IITTDGRNLVGTLAAHDHTTNLVLKNTVERVIRSPEDGEPSVEVPLGLYIVRGENVCVVG 72
Query: 58 EVDK 61
VD+
Sbjct: 73 LVDE 76
>gi|395323274|gb|EJF55754.1| Sm-like ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
Length = 95
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL + ER++ + +IP G+++++G+ +VL+GE+
Sbjct: 13 LLILQDGRAIVGTMAGYDQKSNVVLSDSKERVYSIEEGVEEIPLGLYLVKGDQIVLIGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+ + L + E +
Sbjct: 73 DEATDKAVDLSTIRAEPL 90
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSTLDLGNIRAE 89
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 18 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 77
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 78 EETDSTLDLGNIRAE 92
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQAINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|401882753|gb|EJT46997.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii var.
asahii CBS 2479]
Length = 166
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEV 59
+V+L DGR ++G L+ D + NL+L ++ER + ++ + I G+++I+G+NV L+ EV
Sbjct: 84 IVILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNVALIAEV 143
Query: 60 DKEKE 64
D++K+
Sbjct: 144 DEDKD 148
>gi|449544647|gb|EMD35620.1| hypothetical protein CERSUDRAFT_116344 [Ceriporiopsis
subvermispora B]
Length = 95
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GE+
Sbjct: 13 LLILQDGRAIVGVMAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDQIVLIGEL 72
Query: 60 DKEKEHCPQLQQVSVE 75
D + L V E
Sbjct: 73 DDAVDQSVDLSTVRAE 88
>gi|321471964|gb|EFX82935.1| hypothetical protein DAPPUDRAFT_100799 [Daphnia pulex]
Length = 96
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR IG L+ DQ NL++ + ER+ Q + G+ IIRG+NVVL+GE+D
Sbjct: 15 VITSDGRNFIGILKGFDQTINLIIDDSHERVFSSTQGVEQVQLGLHIIRGDNVVLIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
E + L ++ E
Sbjct: 75 NELDSRLNLSEIRAE 89
>gi|412991296|emb|CCO16141.1| U6 snRNA-associated Sm-like protein LSm8 [Bathycoccus prasinos]
Length = 96
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR ++G+LR DQ NL++ ER++ + N P G++++RG+NV L+G+VD
Sbjct: 15 IITNDGRHIVGHLRGFDQQTNLIVENCHERVYSMENGVEMAPLGLYVVRGDNVALVGDVD 74
Query: 61 KE 62
+E
Sbjct: 75 EE 76
>gi|407918877|gb|EKG12139.1| hypothetical protein MPH_10770 [Macrophomina phaseolina MS6]
Length = 98
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ D RTLIG L S DQ NLVL T ERI ++ G+++IRG+NV L G
Sbjct: 13 IITVDSRTLIGTLLSCDQMTNLVLSDTWERIIRPADDPEPSSEVQHGLYLIRGDNVALCG 72
Query: 58 EVDKE 62
VD+E
Sbjct: 73 LVDEE 77
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 IITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSNLDLGNIRAE 89
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+L+DGR ++G L+ D NL+L ++ER Q + IP G+++I+G+NV ++ E+D
Sbjct: 14 VILQDGRIIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMIPLGLYVIKGDNVAVVAELD 73
Query: 61 KEKEHCPQLQQVSVE 75
+EK+ + E
Sbjct: 74 EEKDSTINYNDIRAE 88
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 VVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|452848209|gb|EME50141.1| hypothetical protein DOTSEDRAFT_20523 [Dothistroma septosporum
NZE10]
Length = 98
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDI----PRGIFIIRGENVVLM 56
++L DGR ++G L S D NL L +ERI + PRG+F++RG+NVV+
Sbjct: 12 CLILVDGRCMVGNLISCDNVTNLALENCVERIVRSPDEDEASEEEPRGLFMVRGDNVVVC 71
Query: 57 GEVDKE 62
G VD+E
Sbjct: 72 GLVDEE 77
>gi|17544148|ref|NP_500964.1| Protein LSM-8 [Caenorhabditis elegans]
gi|351059336|emb|CCD74179.1| Protein LSM-8 [Caenorhabditis elegans]
Length = 98
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NLV+ ER + + P G++IIRGENV ++GE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 61 KEKEHCPQLQQV 72
+E + L+ V
Sbjct: 75 EELDKRVDLENV 86
>gi|340500920|gb|EGR27754.1| U6 snRNA-associated SM protein LSM8, putative [Ichthyophthirius
multifiliis]
Length = 106
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---GNQYGDIPRGIFIIRGENVVLMGE 58
++ DGR L+G L+ +DQ N VL + ER++ G Q+ I G++++RG+NV L+GE
Sbjct: 25 IVTSDGRILVGILKGLDQALNSVLSECTERVYSLEQGVQFNKI--GLYVLRGDNVCLIGE 82
Query: 59 VDKEKEH 65
+D++ E
Sbjct: 83 LDEDIEQ 89
>gi|341882643|gb|EGT38578.1| hypothetical protein CAEBREN_11633 [Caenorhabditis brenneri]
gi|341899974|gb|EGT55909.1| hypothetical protein CAEBREN_04439 [Caenorhabditis brenneri]
Length = 98
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NLV+ ER + + P G++IIRGENV ++GE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 61 KEKEHCPQLQQV 72
+E + L+ V
Sbjct: 75 EELDKRLDLENV 86
>gi|255075791|ref|XP_002501570.1| predicted protein [Micromonas sp. RCC299]
gi|226516834|gb|ACO62828.1| predicted protein [Micromonas sp. RCC299]
Length = 96
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR +IG LR DQ NL+L + ER++ + G++IIRG+N+ ++GE+D
Sbjct: 15 VITNDGRNIIGILRGFDQTTNLILEECFERVYSEDSGVEQAVLGLYIIRGDNIAIIGELD 74
Query: 61 KE 62
+E
Sbjct: 75 EE 76
>gi|268536916|ref|XP_002633593.1| C. briggsae CBR-LSM-8 protein [Caenorhabditis briggsae]
Length = 98
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDI-PRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NLV+ ER + I P G++IIRGENV ++GE+D
Sbjct: 15 VVTGDGRVIVGLLKGFDQLINLVIEDAHERCYSETDGVLITPLGLYIIRGENVAIIGEID 74
Query: 61 KEKEHCPQLQQV 72
+E + L+ V
Sbjct: 75 EELDKRVDLENV 86
>gi|308477573|ref|XP_003101000.1| CRE-LSM-8 protein [Caenorhabditis remanei]
gi|308264344|gb|EFP08297.1| CRE-LSM-8 protein [Caenorhabditis remanei]
Length = 98
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NLV+ ER + + P G++IIRGENV ++GE+D
Sbjct: 15 VVTGDGRIIVGLLKGFDQLINLVIEDAHERSYSETEGVLTTPLGLYIIRGENVAIIGEID 74
Query: 61 KEKEHCPQLQQV 72
+E + L+ V
Sbjct: 75 EELDKRVDLENV 86
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+L+DGR ++G L+ D NL+L ++ER Q + +P G+++I+G+NV ++ E+D
Sbjct: 14 VILQDGRVIVGKLKGYDPRTNLILSDSVEREFSMEQGVEMVPLGLYVIKGDNVAVVAELD 73
Query: 61 KEKEHCPQLQQVSVE 75
+EK+ + E
Sbjct: 74 EEKDSTINYNDIRAE 88
>gi|170100064|ref|XP_001881250.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643929|gb|EDR08180.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 95
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G L DQ +N+VL + ER++ ++ +IP G+++++G+ +VL+GE+
Sbjct: 13 LLILQDGRAIVGVLAGFDQKSNVVLSDSKERVYSMDEGVEEIPLGLYLVKGDMIVLIGEI 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D + L + + I
Sbjct: 73 DDALDQSVDLGTIRADPI 90
>gi|296424977|ref|XP_002842020.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638277|emb|CAZ86211.1| unnamed protein product [Tuber melanosporum]
Length = 99
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQYGD--IPRGIFIIRGENVVLMG 57
++ DGRTL G L DQ NL+L +TIERI G++ + G+++IRG+NV + G
Sbjct: 14 IITSDGRTLTGKLMGHDQTTNLILSRTIERIFATPGSEEATQQVEHGLYLIRGDNVAICG 73
Query: 58 EVDKEKEHCPQLQQVSVEDI 77
VD++ E V E +
Sbjct: 74 LVDEQLEAGIDWSAVRAEPL 93
>gi|443702849|gb|ELU00673.1| hypothetical protein CAPTEDRAFT_206003 [Capitella teleta]
Length = 96
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV-GNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR + G ++ DQ NL+L ++ ER++ G ++ G++IIRG+NV ++GEVD
Sbjct: 15 VITADGRVINGVMKGFDQAINLILDESHERVYSSGGGVEEVILGLYIIRGDNVAIIGEVD 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + + + E
Sbjct: 75 EELDKSLDMNGIKAE 89
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ +DGR ++G L+ DQ N++L + ER+ G+ + G++IIRG+N+ ++GE+D
Sbjct: 15 VITQDGRMIVGTLKGFDQTVNVILDDSHERVFSSGSGVEQVVLGLYIIRGDNIAVIGEID 74
Query: 61 KEKEHCPQLQQVSVEDILNA 80
E + L + D LNA
Sbjct: 75 DEVDGSIDLNDIR-ADPLNA 93
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I RG+NV ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIERGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 75 EETDSALDLGNIRAE 89
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDPDSSLDLGNIRAE 89
>gi|452003159|gb|EMD95616.1| hypothetical protein COCHEDRAFT_1209910 [Cochliobolus
heterostrophus C5]
Length = 98
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI------HVGNQYGDIPRGIFIIRGENVVL 55
VL DGRT++G L S D NLVL + ERI + ++ ++P G++IIRG++V +
Sbjct: 13 VLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSE--EVPLGLYIIRGDSVAV 70
Query: 56 MGEVDKE 62
+G VD+E
Sbjct: 71 VGRVDEE 77
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L + ER++ NQ + I G+ +IRG+NV ++GEVD
Sbjct: 15 IITSDGRNFVGTLKGFDQTINIILDDSHERVYSPNQGVEQIILGLHLIRGDNVAIIGEVD 74
Query: 61 KEKEHCPQLQQVSVEDI 77
+ + L + E I
Sbjct: 75 ETMDSSIDLSAIRAEPI 91
>gi|258597306|ref|XP_001347926.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254832654|gb|AAN35839.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 147
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 5 RDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDKE 62
RD + +G LR+ DQ N+ L +E+I V N + D+ G IIRG+N+ G VD+E
Sbjct: 26 RDNKLYLGILRTYDQHGNVFLTHCVEKIIVPEKNYFSDVYVGNLIIRGDNIAYFGSVDEE 85
Query: 63 KEHCPQLQQVSVED------ILNAQRKEQEVKQERSRMLAKRLKERGLSFVPD 109
K +C D ++ + ++E + +L + L F+P+
Sbjct: 86 K-YCKMFDYTIKNDNDEEHNNMDMIKNKKEYSSSENIILVYKPINHILKFIPE 137
>gi|451856356|gb|EMD69647.1| hypothetical protein COCSADRAFT_166623 [Cochliobolus sativus
ND90Pr]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 8/67 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI------HVGNQYGDIPRGIFIIRGENVVL 55
VL DGRT++G L S D NLVL + ERI + ++ ++P G++IIRG++V +
Sbjct: 13 VLTVDGRTMVGLLHSCDGSMNLVLQEATERIIRPVEEEIPSE--EVPLGLYIIRGDSVAV 70
Query: 56 MGEVDKE 62
+G VD+E
Sbjct: 71 VGRVDEE 77
>gi|209878201|ref|XP_002140542.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556148|gb|EEA06193.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 98
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN----QYGDIPRGIFIIRGENVVLMG 57
VL DG+ IG L+ DQ N++L K E+++ N +Y I G+F+IRG+++ L+G
Sbjct: 15 VLTTDGKVYIGSLKGYDQLTNIILAKCREKVYEANSKVIKY--IELGLFLIRGDSIALIG 72
Query: 58 EVDKE 62
E++ E
Sbjct: 73 EIESE 77
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 15 TVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|428182006|gb|EKX50868.1| hypothetical protein GUITHDRAFT_157257 [Guillardia theta
CCMP2712]
Length = 96
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
++ DGR +IG L+ +DQ N++L + ER+ + G + G++I+RG+N+ ++GEV
Sbjct: 15 IITNDGRNIIGTLKGLDQKLNVILEECYERV-FSKEAGVEQVTLGLYIVRGDNIAIVGEV 73
Query: 60 DKEKEHCPQLQQVSVE 75
D+ K+ + E
Sbjct: 74 DEHKDSGTDWTSIKAE 89
>gi|242207843|ref|XP_002469774.1| predicted protein [Postia placenta Mad-698-R]
gi|220731194|gb|EED85041.1| predicted protein [Postia placenta Mad-698-R]
Length = 95
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL T ER++ + +IP G+++++G+ +VL+ E+
Sbjct: 13 LLILQDGRAIVGVMAGYDQKSNVVLSDTKERVYSMEEGVEEIPLGLYLVKGDQIVLIAEL 72
Query: 60 DKEKEHCPQLQQVSVE 75
D + L + E
Sbjct: 73 DDALDQSVDLSTIRAE 88
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ D NL+L + ERI +Q IP G++++RGENV ++G V+
Sbjct: 13 VITNDGRVVLGSLKGFDHTTNLILSDSFERIISMDQDMETIPLGVYLLRGENVAMVGLVN 72
Query: 61 KE 62
+E
Sbjct: 73 EE 74
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ Q + + G++IIRG+NV ++GE+D
Sbjct: 15 IVTADGRIIVGTLKGFDQTINLILDESHERVFSTTQGVEQVILGLYIIRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
+ ++ + E
Sbjct: 75 DDADNGLDFNNIKAE 89
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
++ DGR ++G L+ DQ NL+L ++ ER++ + +G + G++I+RG+NVVL+G+V
Sbjct: 15 IITADGRHIVGTLKGFDQTINLILDESHERVY-SSAHGVEQVLLGLYIVRGDNVVLVGQV 73
Query: 60 DKE 62
D E
Sbjct: 74 DDE 76
>gi|440290917|gb|ELP84216.1| lsm1, putative [Entamoeba invadens IP1]
Length = 94
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 6 DGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEH 65
DGR IG L D +N+VL + IER+ + IP G+ ++RG+ ++L+G +D++K+
Sbjct: 18 DGRIFIGTLIGYDNPSNIVLRECIERVFSKSGVSVIPCGLLVLRGDEIILIGALDEQKDS 77
>gi|357016875|gb|AET50466.1| hypothetical protein [Eimeria tenella]
Length = 97
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
VL DGR +G L + DQ N+VL+K E++ H +P G++++RG+N+ ++G+VD
Sbjct: 15 VLTFDGRLFMGTLIAFDQSTNIVLNKCAEKVVHEDAPVEIVPLGLYLLRGDNIAVVGQVD 74
Query: 61 KEKE 64
++ E
Sbjct: 75 EDVE 78
>gi|453089691|gb|EMF17731.1| splicing factor [Mycosphaerella populorum SO2202]
Length = 98
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDI----PRGIFIIRGENVVLM 56
++L DGR ++G L S DQ NL L +ERI + RG+F++RG+NVV+
Sbjct: 12 CLILVDGRCMVGKLISCDQVTNLALEGCVERIIRSPDDDEASEEEARGLFMVRGDNVVVC 71
Query: 57 GEVDKE 62
G VD+E
Sbjct: 72 GLVDEE 77
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+ G+NVV++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVGGDNVVVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|170585854|ref|XP_001897697.1| U6 snRNA-associated Sm-like protein LSm8 [Brugia malayi]
gi|158595004|gb|EDP33581.1| U6 snRNA-associated Sm-like protein LSm8, putative [Brugia
malayi]
gi|402593521|gb|EJW87448.1| small nuclear ribonucleoprotein splicing factor [Wuchereria
bancrofti]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G ++ DQ NLVL + ER+ + + IP G++I+RG+NV ++GE+D
Sbjct: 15 VITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDSGVEQIPLGLYIVRGDNVAVIGELD 74
Query: 61 KE 62
++
Sbjct: 75 ED 76
>gi|324537696|gb|ADY49512.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Ascaris
suum]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G ++ DQ NLVL + ER+ + + IP G++I+RG+NV ++GE+D
Sbjct: 15 VITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAVVGELD 74
Query: 61 K--------EKEHCPQLQQVSV 74
+ EK P L + +
Sbjct: 75 EDLDKRLDFEKMKAPPLGPIWI 96
>gi|312066607|ref|XP_003136350.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
gi|307768477|gb|EFO27711.1| U6 snRNA-associated Sm-like protein LSm8 [Loa loa]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G ++ DQ NLVL + ER+ + + IP G++I+RG+NV ++GE+D
Sbjct: 15 VITGDGRNIVGLMKGFDQTINLVLEDSHERVFSEDAGVEQIPLGLYIVRGDNVAVIGELD 74
Query: 61 KE--------KEHCPQLQQVSV 74
++ K P L V V
Sbjct: 75 EDLDKRLDFSKMKAPPLGPVWV 96
>gi|452989425|gb|EME89180.1| hypothetical protein MYCFIDRAFT_25154 [Pseudocercospora fijiensis
CIRAD86]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN----QYGDIPRGIFIIRGENVVLMG 57
++L DGR ++G L S D NL L +ERI G+ + RG+F++RG+NVV+ G
Sbjct: 13 LILVDGRCMVGNLISCDAVTNLALENCVERIVRGHEEEEDSEEEERGLFMVRGDNVVVCG 72
Query: 58 EVDKE 62
VD+E
Sbjct: 73 LVDEE 77
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ NL+L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 15 IITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGEID 74
Query: 61 KEKE 64
E +
Sbjct: 75 DEMD 78
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G LR DQ N++L ++ ER++ + + G++IIRG+N+ ++GEVD
Sbjct: 18 VITNDGRNIVGTLRGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGEVD 77
Query: 61 KE 62
+E
Sbjct: 78 EE 79
>gi|159473465|ref|XP_001694854.1| Sm protein [Chlamydomonas reinhardtii]
gi|158276233|gb|EDP02006.1| Sm protein [Chlamydomonas reinhardtii]
Length = 100
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV---GNQYGDIPRGIFIIRGENVVLMG 57
V+ DG+ +G LR DQ NL+L + ER++ G Q P GI+ IRG+NV ++G
Sbjct: 17 TVITNDGKHYVGVLRGYDQTWNLLLQECQERVYSAKSGVQVIQNP-GIYCIRGDNVAIVG 75
Query: 58 EVDKEKEHCPQLQQV 72
EVD+E + L +
Sbjct: 76 EVDEEADGAVDLSAI 90
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G LR DQ N++L ++ ER++ + + G++IIRG+N+ ++GEVD
Sbjct: 18 VITNDGRNIVGTLRGFDQATNIILDESHERVYSTREGVQQLVLGLYIIRGDNISVVGEVD 77
Query: 61 KE 62
+E
Sbjct: 78 EE 79
>gi|123445454|ref|XP_001311487.1| Sm protein [Trichomonas vaginalis G3]
gi|121893298|gb|EAX98557.1| Sm protein [Trichomonas vaginalis G3]
Length = 126
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-GIFIIRGENVVLMGEVD 60
V+ D +G L S DQF N++L K + R N Y D + G IR + V+L+G+VD
Sbjct: 50 VITADDIEYVGELSSFDQFGNIILAKAVLRTFGPNGYDDEEKLGTIFIRSDQVILIGKVD 109
Query: 61 KEKEHCPQLQQVSVED 76
K+KE+ +L +V ED
Sbjct: 110 KDKEN--KLLEVEEED 123
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
++ DGR ++G L+ DQ NL+L ++ ER+ + +G + G++IIRG+NV ++GEV
Sbjct: 15 IVTADGRMIVGTLKGFDQTVNLILDESHERVF-SSSHGVEQVMLGLYIIRGDNVAVVGEV 73
Query: 60 DKEKEHCPQLQQV 72
D + L+ +
Sbjct: 74 DDTTDAALDLENM 86
>gi|169806226|ref|XP_001827858.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
gi|161779306|gb|EDQ31329.1| U6 snRNA-associated Sm-like protein LSm8 [Enterocytozoon bieneusi
H348]
Length = 136
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V+L+D L G L+S DQ+ N+ L+ ++RI NQY + G +IRG+ +V++
Sbjct: 49 VVILKDNSLLYGTLKSYDQYNNISLNYAVQRIFHNNQYAEKMIGFIVIRGDTIVMIS 105
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G LR DQ N++L ++ ER++ + + G++IIRG+N+ ++GEVD
Sbjct: 18 VITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVLGLYIIRGDNISVVGEVD 77
Query: 61 KE 62
+E
Sbjct: 78 EE 79
>gi|313227657|emb|CBY22804.1| unnamed protein product [Oikopleura dioica]
Length = 96
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
++ DGR ++G L+ +DQ N+VL T ER+ G+++IRG+NV ++G VD+
Sbjct: 15 IVTNDGRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYLIRGDNVAVVGAVDE 74
Query: 62 EKE 64
E
Sbjct: 75 NTE 77
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ NL+L ++ ER+ Q + G++IIRG+N+ ++GE+D
Sbjct: 15 VITSDGRMIVGTLKGFDQTTNLILDESHERVFSSGQGVEQVVLGLYIIRGDNIAVVGEID 74
Query: 61 KE 62
+
Sbjct: 75 DD 76
>gi|302837889|ref|XP_002950503.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
gi|300264052|gb|EFJ48249.1| hypothetical protein VOLCADRAFT_90948 [Volvox carteri f.
nagariensis]
Length = 100
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH---VGNQYGDIPRGIFIIRGENVVLMGE 58
V+ DG+ +G LR DQ NL+L + ER++ G Q P G++ IRG+NV ++GE
Sbjct: 18 VITNDGKHYVGILRGYDQATNLLLQECQERVYSTKSGVQIIQNP-GVYCIRGDNVAVVGE 76
Query: 59 VDKEKE 64
VD+E +
Sbjct: 77 VDEEAD 82
>gi|340369040|ref|XP_003383057.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Amphimedon queenslandica]
Length = 97
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ N++L + ER++ + + + G++IIRG+N+ ++GE+D
Sbjct: 16 IITGDGRVIVGTLKGFDQTVNIILSNSHERVYSSSSGVEQVQLGLYIIRGDNIAVIGELD 75
Query: 61 KEKEHCPQLQQVSVE 75
+E + L + E
Sbjct: 76 EELDSEINLNDIRAE 90
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ NL+L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 15 IITSDGRNFIGTLKGFDQTINLILDESHERVYSTTQGVEQVVLGLHIIRGDNVAVIGELD 74
Query: 61 KEKE 64
E +
Sbjct: 75 DEMD 78
>gi|319411566|emb|CBQ73610.1| related to LSM8-Component of small nuclear ribonucleoprotein
complexes involved in RNA processing and splicing
[Sporisorium reilianum SRZ2]
Length = 96
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+V+ +DGR ++G LR D +++L ++ERI ++ ++P G++I+RG+++ L+G V
Sbjct: 13 LVITQDGRVIVGTLRGSDAVGSIILASSVERIFSADEGVEEVPLGLYILRGDSICLVGPV 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D +K+ QV E I
Sbjct: 73 DADKDKDVDWSQVMAEPI 90
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR IG L+ DQ N++L ++ ER++ Q + G+ IIRG+N+ ++GE+D
Sbjct: 15 VITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNIAIVGELD 74
Query: 61 KEKEHCPQLQQVSVE 75
E + L + E
Sbjct: 75 DEMDARLDLSAIRAE 89
>gi|328354479|emb|CCA40876.1| U6 snRNA-associated Sm-like protein LSm8 [Komagataella pastoris
CBS 7435]
Length = 98
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
V+ DG+ + G L+ D N++L K ER+ H+ + I G+F++RG NVV +G VD
Sbjct: 14 VITSDGKLITGILQGFDVSTNIILEKAQERVFHLTEETQTIDLGLFLLRGNNVVCIGLVD 73
Query: 61 KEKE 64
+E+E
Sbjct: 74 EEEE 77
>gi|351700996|gb|EHB03915.1| U6 snRNA-associated Sm-like protein LSm8 [Heterocephalus glaber]
Length = 123
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 10 LIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVDKEKEHCPQ 68
++G + DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D+E +
Sbjct: 3 VVGTFKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 62
Query: 69 LQQVSVEDILNAQRKEQEVKQERSRM-LAKRLKERGLSFV 107
L + E + + +E+ +++R + + K E L V
Sbjct: 63 LGNIRAEPLNSVAHEEKNTEEKRHALDICKSCTETVLRMV 102
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIG 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR---GIFIIRGENVVLMGE 58
V+ DGR ++G L+ DQ NL++ ++ ER++ + + + G++IIRG+N+ ++GE
Sbjct: 20 VITNDGRNIVGMLKGYDQATNLIIDESHERVY--STTTGVEQHVLGLYIIRGDNIAVVGE 77
Query: 59 VDKEKEHCPQLQQV 72
+D E E L +
Sbjct: 78 LDDEMESTLDLTAI 91
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L + ER++ NQ + G+ IIRG+NVV++GE+D
Sbjct: 14 IITADGRHFVGTLKGFDQTLNVILDDSHERVYSTNQGVEQVVLGLHIIRGDNVVIVGEID 73
Query: 61 KEKEHCPQLQQVSVE 75
+ + ++ E
Sbjct: 74 ETIDSRTDFSKIRAE 88
>gi|389583785|dbj|GAB66519.1| LSM domain containing protein [Plasmodium cynomolgi strain B]
Length = 149
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 5 RDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDKE 62
RD + +G LR+ DQ N+ L +E+I V N + D+ G IIRG+N+ G VD++
Sbjct: 26 RDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNYFSDVYVGNLIIRGDNIAYFGSVDED 85
Query: 63 K 63
K
Sbjct: 86 K 86
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N++L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 21 IITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGELD 80
Query: 61 KEKE 64
E +
Sbjct: 81 DEMD 84
>gi|225454559|ref|XP_002263175.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Vitis vinifera]
gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELD 76
Query: 61 KEKEHCPQLQQV 72
+E + L ++
Sbjct: 77 EELDSSLDLSKL 88
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G LR DQ NL+L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 15 IITSDGRNFVGTLRGFDQTINLILDESHERVYSQTQGIEQVVLGLHIIRGDNVAVIGEMD 74
Query: 61 KE 62
E
Sbjct: 75 DE 76
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ NL+L ++ E + +Q + + G++I+RG+NV ++GE+D
Sbjct: 15 IVTSDGRMIVGTLKGFDQTINLILDESHECVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 74
Query: 61 KEKEHCPQLQQVSVE 75
++ + L + E
Sbjct: 75 EDTDSSLDLGNIRAE 89
>gi|384251155|gb|EIE24633.1| hypothetical protein COCSUDRAFT_53022 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD--IPRGIFIIRGENVVLMGEV 59
V+ DGR ++G LR DQ NL+L + ER++ + + G+ ++RG+N+ ++GEV
Sbjct: 17 VITNDGRVIVGILRGYDQATNLILDECHERVYSSKAGVEQVVLGGLHVVRGDNIAVVGEV 76
Query: 60 DKEKEHCPQLQQV 72
D E E L +
Sbjct: 77 DDEIEQGLDLSAI 89
>gi|351723875|ref|NP_001237294.1| uncharacterized protein LOC100305829 [Glycine max]
gi|356525792|ref|XP_003531507.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Glycine max]
gi|255626721|gb|ACU13705.1| unknown [Glycine max]
Length = 98
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISVVGELD 76
Query: 61 KEKEHCPQLQQV 72
+E + L ++
Sbjct: 77 EELDSSLDLSKL 88
>gi|302763963|ref|XP_002965403.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
gi|300167636|gb|EFJ34241.1| hypothetical protein SELMODRAFT_83281 [Selaginella
moellendorffii]
Length = 91
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR---GIFIIRGENVVLMGE 58
V+ DGR ++G L+ DQ NL++ ++ ER++ + + + G++IIRG+N+ ++GE
Sbjct: 8 VITNDGRNIVGMLKGYDQATNLIIDESHERVY--STTTGVEQHVLGLYIIRGDNIAVVGE 65
Query: 59 VDKEKEHCPQLQQV 72
+D E E L +
Sbjct: 66 LDDEMESTLDLTAI 79
>gi|307174073|gb|EFN64760.1| U6 snRNA-associated Sm-like protein LSm8 [Camponotus floridanus]
Length = 85
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N++L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 4 IITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGELD 63
Query: 61 KEKE 64
E +
Sbjct: 64 DEMD 67
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N++L ++ ER++ Q + G+ IIRG+NV ++GE+D
Sbjct: 15 IITSDGRNFIGTLKGFDQTINIILDESHERVYSTTQGVEQVVLGLHIIRGDNVAIVGELD 74
Query: 61 KEKE 64
E +
Sbjct: 75 DEMD 78
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38, NatC
auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V++ D RT++G L+ DQ NL L ++ E + + G + G++I+RG+NV ++GE
Sbjct: 50 VIISDVRTIVGTLKGFDQTINLTLDESHEWLVFSSSQGVEQVVLGLYIVRGDNVAVIGER 109
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+E + L + E +
Sbjct: 110 DEETDSALNLGNIXAEPL 127
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V+ DGR ++G L+ DQ NL++ ++ ER++ + G + G++IIRG+N+ ++GE+
Sbjct: 17 VITNDGRNIVGILKGYDQATNLIMDESHERVY-STRTGVEQLVLGLYIIRGDNISVVGEL 75
Query: 60 DKEKEHCPQLQQV 72
D++ + L Q+
Sbjct: 76 DEDLDSNLDLSQL 88
>gi|449439529|ref|XP_004137538.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
gi|449514856|ref|XP_004164499.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
Length = 98
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELD 76
Query: 61 KE 62
+E
Sbjct: 77 EE 78
>gi|345561980|gb|EGX45052.1| hypothetical protein AOL_s00173g153 [Arthrobotrys oligospora ATCC
24927]
Length = 103
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 7/70 (10%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH------VGNQYGDI-PRGIFIIRGENVV 54
V+ DGRTLIG L DQ NL+L T ERI V N +I G+++IRG+NV+
Sbjct: 14 VITSDGRTLIGTLLGHDQTTNLILQNTRERIFQTLDTDVENTPSEIVEHGLYLIRGDNVL 73
Query: 55 LMGEVDKEKE 64
+ G VD++ +
Sbjct: 74 VCGLVDEKMD 83
>gi|402222121|gb|EJU02188.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 98
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G L D +++VL IER + ++ ++ G+++++G+ ++L+GE+
Sbjct: 13 LLILQDGRCIVGTLAGFDNRSDIVLSNCIERTYSPDEPVEEVSLGLYLVKGDMILLVGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D E E L Q E +
Sbjct: 73 DTELEASLDLSQQRAEPL 90
>gi|156098687|ref|XP_001615359.1| LSM domain containing protein [Plasmodium vivax Sal-1]
gi|148804233|gb|EDL45632.1| LSM domain containing protein [Plasmodium vivax]
Length = 256
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 5 RDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDKE 62
RD + +G LR+ DQ N+ L +E+I V N + D+ G IIRG+N+ G VD++
Sbjct: 133 RDNKLYLGILRTYDQHGNIFLTHCVEKIIVPDRNCFSDVYVGNLIIRGDNIAYFGSVDED 192
Query: 63 K 63
K
Sbjct: 193 K 193
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNISIVGELD 76
Query: 61 KE 62
+E
Sbjct: 77 EE 78
>gi|380471141|emb|CCF47424.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 99
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD----IPRGIFIIRGENVVLM 56
+++ D R L+G L + DQ NLVL ER+ + G+ +P G++++RG+NV +
Sbjct: 13 LIVTSDSRILVGTLEAADQSTNLVLSAAQERVIQTPESGEPSVQVPLGLYLVRGDNVCTI 72
Query: 57 GEVDK 61
G VD+
Sbjct: 73 GLVDE 77
>gi|112253325|gb|ABI14250.1| Sm-like protein [Pfiesteria piscicida]
Length = 85
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V+ DGR +G LR DQ +N+VL ER+ + G + G+++IRG+N+ ++GEV
Sbjct: 15 VVTNDGRLFVGLLRGFDQTSNVVLSDCQERVF-DTEKGVEQVVLGLYVIRGDNIAVVGEV 73
Query: 60 DKE 62
D+E
Sbjct: 74 DEE 76
>gi|310793932|gb|EFQ29393.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 99
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD----IPRGIFIIRGENVVLM 56
+++ D R L+G L + DQ NLVL ER+ + G+ +P G++++RG+NV +
Sbjct: 13 LIVTADSRILVGTLEAADQSTNLVLSNAQERVIQTPESGEPSVQVPLGLYLVRGDNVCTI 72
Query: 57 GEVDK 61
G VD+
Sbjct: 73 GLVDE 77
>gi|46107166|ref|XP_380642.1| hypothetical protein FG00466.1 [Gibberella zeae PH-1]
Length = 132
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G + + DQ NLVL+ +ERI +P G++++RG+NV +
Sbjct: 32 LIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQVPLGLYLVRGDNVCSI 91
Query: 57 GEVDK 61
G VD+
Sbjct: 92 GLVDE 96
>gi|408398656|gb|EKJ77785.1| hypothetical protein FPSE_02019 [Fusarium pseudograminearum
CS3096]
Length = 118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G + + DQ NLVL+ +ERI +P G++++RG+NV +
Sbjct: 32 LIVTADSRILVGTMAACDQTTNLVLNNAVERIIRTPDDSEPSAQVPLGLYLVRGDNVCSI 91
Query: 57 GEVDK 61
G VD+
Sbjct: 92 GLVDE 96
>gi|388580917|gb|EIM21228.1| hypothetical protein WALSEDRAFT_7029, partial [Wallemia sebi CBS
633.66]
Length = 80
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++ DGR LIG+L+ D +N++L ++ ER+ +Q + G+++I+G+N+V E+
Sbjct: 3 LLITTDGRCLIGHLQGYDNNSNIILSQSFERVFSSDQGVQTVDLGLYLIKGDNLVCASEI 62
Query: 60 DKEKEHCPQLQQVSVEDI 77
D + + V + I
Sbjct: 63 DTTIDDQNEWSNVKADPI 80
>gi|330930214|ref|XP_003302943.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
gi|311321410|gb|EFQ88979.1| hypothetical protein PTT_14940 [Pyrenophora teres f. teres 0-1]
Length = 98
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
VL DGRT++G L S D NLVL + +ERI ++P G++IIRG++V ++G
Sbjct: 13 VLTLDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLYIIRGDSVAVVG 72
Query: 58 EVDKEKEHCPQLQQVSVEDILNAQ 81
+VD+E + +V E + N +
Sbjct: 73 KVDEEIDSKINWSKVHGEVLGNTK 96
>gi|221056216|ref|XP_002259246.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
gi|193809317|emb|CAQ40019.1| hypothetical protein, conserved in Apicomplexan species
[Plasmodium knowlesi strain H]
Length = 149
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 5 RDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDKE 62
RD + G LR+ DQ N+ L +E+I + N + DI G IIRG+N+ G VD++
Sbjct: 26 RDNKLYQGILRTYDQHGNIFLTHCVEKIIIPERNYFSDIYVGNLIIRGDNIAYFGSVDED 85
Query: 63 K 63
K
Sbjct: 86 K 86
>gi|396460512|ref|XP_003834868.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
gi|312211418|emb|CBX91503.1| hypothetical protein LEMA_P070110.1 [Leptosphaeria maculans JN3]
Length = 219
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
VL DGRT++G L S D NLVL IERI ++P G++I+RG++V ++G
Sbjct: 134 VLTLDGRTMVGTLHSCDNSMNLVLQNAIERIIRPREEEVPSEEVPLGLYIVRGDSVAVVG 193
Query: 58 EVDKE 62
+D+E
Sbjct: 194 RLDEE 198
>gi|353237612|emb|CCA69581.1| hypothetical protein PIIN_03520 [Piriformospora indica DSM 11827]
Length = 98
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGE 58
+++++DGR ++G L DQ +N+VL +ER + G D G+++++G+ + L+GE
Sbjct: 13 LLVMQDGRVIMGNLVGWDQRSNIVLADCVER-RFSQESGATDSALGVYMVKGDQICLVGE 71
Query: 59 VDKEKEHCPQLQQVSVE 75
VD E ++ V+
Sbjct: 72 VDAAIEEATSWSEIKVD 88
>gi|85080278|ref|XP_956512.1| hypothetical protein NCU01601 [Neurospora crassa OR74A]
gi|16416020|emb|CAB91370.2| related to LSM1 protein [Neurospora crassa]
gi|28917579|gb|EAA27276.1| predicted protein [Neurospora crassa OR74A]
Length = 165
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 10/49 (20%)
Query: 21 ANLVLHKTIERIHV--GNQ--------YGDIPRGIFIIRGENVVLMGEV 59
NLVL +T ERI V G Q Y D+ RG+F++RGENV+LMGE+
Sbjct: 60 TNLVLQQTKERIFVPPGTQSPTQTRGLYADVDRGLFVVRGENVLLMGEI 108
>gi|342879398|gb|EGU80649.1| hypothetical protein FOXB_08872 [Fusarium oxysporum Fo5176]
Length = 119
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG----NQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + DQ NLVL+ +ERI +P G++++RG+NV +
Sbjct: 33 LIVTADSRILVGTLAACDQTTNLVLNNAVERIIRTPDDLEPSAQVPLGLYLVRGDNVCSI 92
Query: 57 GEVDK 61
G VD+
Sbjct: 93 GLVDE 97
>gi|328865684|gb|EGG14070.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 145
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+VL DGR ++G L +DQ N++L K ERI+ ++ GI +I+G++V ++GE+
Sbjct: 13 LVLTADGRNIVGTLIGLDQTTNIILEKCHERIYSPDEGVTKYNLGIHLIKGDDVAVIGEI 72
Query: 60 DKE 62
D+E
Sbjct: 73 DQE 75
>gi|189205681|ref|XP_001939175.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975268|gb|EDU41894.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 98
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
VL DGRT++G L S D NLVL + +ERI ++P G++IIRG++V ++G
Sbjct: 13 VLTIDGRTMVGKLHSCDGSMNLVLQEAVERIIRPLEEEVPSEEVPLGLYIIRGDSVAVVG 72
Query: 58 EVDKEKEHCPQLQQVSVEDILNAQ 81
+VD+E + +V E + N +
Sbjct: 73 KVDEEIDSKINWSKVHGEVLGNTK 96
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIP-RGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLHVLGLYIIRGDNISIVGELD 76
Query: 61 KE 62
+E
Sbjct: 77 EE 78
>gi|168040498|ref|XP_001772731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675956|gb|EDQ62445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 3/63 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
V+ DGR ++G L+ DQ NL+L ++ ER++ + G + G+ IIRG+N+ ++GE+
Sbjct: 17 VITNDGRNIVGVLKGFDQATNLILDESHERVY-STKAGVEQVVLGLHIIRGDNIGVVGEL 75
Query: 60 DKE 62
D+E
Sbjct: 76 DEE 78
>gi|429848447|gb|ELA23927.1| small nuclear ribonucleoprotein lsm8 [Colletotrichum
gloeosporioides Nara gc5]
Length = 99
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + DQ NLVL ER+ G ++P G++++RG+NV +
Sbjct: 13 LIVTVDSRILVGNLEAADQNTNLVLSNAQERVIQTPESGEPSVEVPLGLYLVRGDNVCTV 72
Query: 57 GEVDKEKEHCPQLQQV 72
G VD++ + +V
Sbjct: 73 GLVDEQLDESINWTEV 88
>gi|70947410|ref|XP_743323.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522766|emb|CAH80747.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 119
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 5 RDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDKE 62
RD + +G LR+ DQ N+ L +E+I + N + D+ G IIRG+N+ G +D+
Sbjct: 3 RDNKLYLGILRTYDQHGNIFLTHCVEKIIIPEQNYFSDVYVGNLIIRGDNIAYFGSIDES 62
Query: 63 K 63
K
Sbjct: 63 K 63
>gi|308806556|ref|XP_003080589.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
gi|116059050|emb|CAL54757.1| Small Nuclear ribonucleoprotein splicing factor (ISS)
[Ostreococcus tauri]
Length = 110
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 14/74 (18%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVV----- 54
VL DGR ++G LR DQ N++L ER++ ++ G + P G+++IRG+NV
Sbjct: 18 VLTNDGRHVVGTLRGFDQVTNVILEDCAERVY-SSESGVEEAPLGVYMIRGDNVCVGDDA 76
Query: 55 ------LMGEVDKE 62
L+G VD+E
Sbjct: 77 IDATRPLVGPVDEE 90
>gi|297841127|ref|XP_002888445.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
gi|297334286|gb|EFH64704.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER+ + G++IIRG+N+ ++GE+D
Sbjct: 509 VITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELD 568
Query: 61 KE 62
+E
Sbjct: 569 EE 570
>gi|426195314|gb|EKV45244.1| hypothetical protein AGABI2DRAFT_194226 [Agaricus bisporus var.
bisporus H97]
Length = 95
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL ER+ ++ +I G+++++G+ + L+GE+
Sbjct: 13 LLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIGEL 72
Query: 60 DKEKEHCPQLQQVSVEDI 77
D+E + L + + I
Sbjct: 73 DEEIDSSVDLSTIRADPI 90
>gi|358398681|gb|EHK48032.1| hypothetical protein TRIATDRAFT_305784 [Trichoderma atroviride
IMI 206040]
Length = 99
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + D NLVL +ERI + ++P G++++RG+NV +
Sbjct: 13 LIVTADSRILVGELAACDASTNLVLKNALERIIRTPDDPDPSAEVPLGLYLVRGDNVCSI 72
Query: 57 GEVDKEKEHCPQLQQV 72
G VD+ + QV
Sbjct: 73 GLVDETLDESIDWTQV 88
>gi|224059783|ref|XP_002299990.1| predicted protein [Populus trichocarpa]
gi|118484411|gb|ABK94082.1| unknown [Populus trichocarpa]
gi|222847248|gb|EEE84795.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR ++G L+ DQ N++L ++ ER++ + + G++IIRG+N+ ++GE+D
Sbjct: 17 IITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLGLYIIRGDNIGVVGELD 76
Query: 61 KE 62
+E
Sbjct: 77 EE 78
>gi|221053308|ref|XP_002258028.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193807861|emb|CAQ38565.1| u6 snrna-associated sm-like protein, putative [Plasmodium
knowlesi strain H]
Length = 95
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+ D R G L+ DQ N++L ERI+ I G++IIRG+ V L+GE+D
Sbjct: 15 LVITNDSRIFTGKLKGFDQTTNIILGNCYERIY-KESLEKISLGLYIIRGDTVTLIGEID 73
Query: 61 KE 62
++
Sbjct: 74 ED 75
>gi|6686407|gb|AAF23841.1|AC007234_13 F1E22.8 [Arabidopsis thaliana]
Length = 583
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER+ + G++IIRG+N+ ++GE+D
Sbjct: 502 VITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELD 561
Query: 61 KE 62
+E
Sbjct: 562 EE 563
>gi|156097675|ref|XP_001614870.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium vivax Sal-1]
gi|148803744|gb|EDL45143.1| U6 snRNA-associated Sm-like protein LSm8, putative [Plasmodium
vivax]
Length = 95
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+ D R G L+ DQ N++L ERI+ I G++IIRG+ V L+GE+D
Sbjct: 15 LVITNDSRIFTGKLKGFDQTTNIILGNCYERIY-KESLEKISLGLYIIRGDTVTLIGEID 73
Query: 61 KE 62
++
Sbjct: 74 ED 75
>gi|389582364|dbj|GAB65102.1| U6 snRNA-associated Sm-like protein LSm8 [Plasmodium cynomolgi
strain B]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+ D R G L+ DQ N++L ERI+ I G++IIRG+ V L+GE+D
Sbjct: 15 LVITNDSRIFTGKLKGFDQTTNIILGNCYERIY-KESLEKISLGLYIIRGDTVTLIGEID 73
Query: 61 KE 62
++
Sbjct: 74 ED 75
>gi|336271831|ref|XP_003350673.1| hypothetical protein SMAC_02344 [Sordaria macrospora k-hell]
gi|380094835|emb|CCC07337.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 155
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 10/51 (19%)
Query: 24 VLHKTIERIHV--GNQ--------YGDIPRGIFIIRGENVVLMGEVDKEKE 64
+L +T ERI V G Q Y D+ RG+F++RGENV+LMGE+D +++
Sbjct: 53 ILQQTKERIFVPPGTQSPAQTRGLYADVDRGLFVVRGENVLLMGEIDLDRD 103
>gi|409076971|gb|EKM77339.1| hypothetical protein AGABI1DRAFT_115264 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++L+DGR ++G + DQ +N+VL ER+ ++ +I G+++++G+ + L+GE+
Sbjct: 13 LLVLQDGRAIVGVMAGFDQRSNIVLSDCKERVFSMDEGVEEIALGLYLVKGDMISLIGEL 72
Query: 60 DKEKEHCPQLQQV 72
D+E + L +
Sbjct: 73 DEEIDSSVDLSTI 85
>gi|119603941|gb|EAW83535.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|119603942|gb|EAW83536.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|344252438|gb|EGW08542.1| U6 snRNA-associated Sm-like protein LSm8 [Cricetulus griseus]
Length = 75
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 10 LIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVDKEKEHCPQ 68
++G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D+E +
Sbjct: 2 IVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 61
Query: 69 LQQVSVE 75
L + E
Sbjct: 62 LGNIRAE 68
>gi|296005102|ref|XP_002808886.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
gi|225632285|emb|CAX64164.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
falciparum 3D7]
Length = 95
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V+ D R G L+ DQ N++L ERI+ I G++IIRG+ V L+GE+D
Sbjct: 15 LVITNDSRIFTGKLKGFDQTTNIILGNCHERIY-KESMEKISLGVYIIRGDTVTLIGEID 73
Query: 61 KE 62
++
Sbjct: 74 ED 75
>gi|354543302|emb|CCE40020.1| hypothetical protein CPAR2_100580 [Candida parapsilosis]
Length = 101
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-----IPRGIFIIRGENVVLM 56
V+ D R G L D+ N++L +IER+ Q D IP G+ I+RG +V +
Sbjct: 14 VITTDARFFEGILEGFDKNTNIILSNSIERLIHSTQESDEANEAIPSGVNIMRGNEIVCI 73
Query: 57 GEVDKE 62
GE+D+E
Sbjct: 74 GEIDEE 79
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGE 58
VL DGR + G L DQ NL+L ++ ER++ V + + G+F++RG+NV ++G+
Sbjct: 15 VLTCDGRLITGTLAGYDQLQNLILSRSSERVYSVDSPVEVVELGLFVVRGDNVAIIGD 72
>gi|429962956|gb|ELA42500.1| hypothetical protein VICG_00599 [Vittaforma corneae ATCC 50505]
Length = 126
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+VLL+D L G +S DQ+ ++ L+ +ERI Y + +G+ +IRGE+++ +G
Sbjct: 34 VVLLKDDIYLYGVFKSYDQYNSITLNYVLERIFHEGAYAERRQGLMVIRGESIIFIG 90
>gi|444520194|gb|ELV12928.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Tupaia
chinensis]
Length = 106
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V +R + G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D
Sbjct: 25 VAIRAQKCYQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEID 84
Query: 61 KEKEHCPQLQQVSVEDI 77
+E + L + E +
Sbjct: 85 EETDSALDLGNIRAEPL 101
>gi|294659468|ref|XP_461847.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
gi|199433986|emb|CAG90308.2| DEHA2G06886p [Debaryomyces hansenii CBS767]
Length = 99
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD---IPRGIFIIRGENVVLMGE 58
V+ D R G L+ D N++++ IER+ ++ D IP G++++RG N+V +GE
Sbjct: 14 VITTDARLFEGTLQGFDNSTNVIINNCIERLIYPDEQDDNQEIPLGLYLMRGGNIVCIGE 73
Query: 59 VDKEKE 64
VD E
Sbjct: 74 VDDTIE 79
>gi|209882130|ref|XP_002142502.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209558108|gb|EEA08153.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 140
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+LRD R G RS DQ+ +L L E I Q Y I G I RG++++L G +D
Sbjct: 38 VILRDSRQFKGIFRSFDQYGSLCLEAVYEIISNSKQEYTQIYLGCMIFRGDSLMLCGLID 97
Query: 61 K 61
+
Sbjct: 98 E 98
>gi|344301944|gb|EGW32249.1| hypothetical protein SPAPADRAFT_50817 [Spathaspora passalidarum
NRRL Y-27907]
Length = 101
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-----HVGNQYGDIPRGIFIIRGENVVLM 56
V+ D R G L+ D N++L IERI V + +IP G++IIRG V +
Sbjct: 14 VITADARFFEGVLQGYDNSTNIILQDCIERILYSEEDVDEENQEIPLGLYIIRGGEVACV 73
Query: 57 GEVDKEK 63
GE+D K
Sbjct: 74 GEIDPAK 80
>gi|358387144|gb|EHK24739.1| hypothetical protein TRIVIDRAFT_30919 [Trichoderma virens Gv29-8]
Length = 99
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + D NLVL +ERI ++P G++++RG+NV +
Sbjct: 13 LIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLYLVRGDNVCSV 72
Query: 57 GEVDKEKEHCPQLQQV 72
G VD+ + QV
Sbjct: 73 GLVDETLDDSIDWTQV 88
>gi|357622254|gb|EHJ73807.1| hypothetical protein KGM_20501 [Danaus plexippus]
Length = 96
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR IG L+ DQ N++L ++ ER+ + + G+ IIRG+N+ ++G++D
Sbjct: 15 VITADGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLHIIRGDNIAIVGQID 74
Query: 61 KEKEHCPQLQQVSVE 75
+ + L + E
Sbjct: 75 ESIDSRLDLGNIKAE 89
>gi|71033639|ref|XP_766461.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353418|gb|EAN34178.1| hypothetical protein TP01_0940 [Theileria parva]
Length = 162
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
V LRD +G +S DQF N+V+ +++I + N+ + DI G +IRGE++
Sbjct: 26 WVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIILNNKRSFSDIYCGYTVIRGESISYFCA 85
Query: 59 VD 60
+D
Sbjct: 86 ID 87
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L ++ ER++ N + G+ IIRG+NV ++G++D
Sbjct: 81 IITADGRNFVGTLKGFDQTINIILDESHERVYSMNAGIEQVVLGLHIIRGDNVAVIGQLD 140
Query: 61 K 61
+
Sbjct: 141 E 141
>gi|238882680|gb|EEQ46318.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 146
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN-----QYGDIPRGIFIIRGENVVLM 56
V+ D R G L D+ N++L IERI + +IP G++I+RG +V +
Sbjct: 58 VITSDARFFEGILEGYDKSTNIILSNCIERIIYSKDDEEGENQEIPLGVYIMRGNEIVCV 117
Query: 57 GEVDKE 62
GE+D E
Sbjct: 118 GEIDDE 123
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ ++ ER++ + + G+ IIRG+NV ++G +D
Sbjct: 15 IITSDGRNFIGTLKGFDQTINVIIDESHERVYSTTSGVEQVMLGLHIIRGDNVAIVGLID 74
Query: 61 KEKEHCPQLQQVSVE 75
E ++ L + E
Sbjct: 75 DELDNRLNLANIKAE 89
>gi|281350809|gb|EFB26393.1| hypothetical protein PANDA_005681 [Ailuropoda melanoleuca]
Length = 74
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 10 LIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVDKEKEHCPQ 68
L G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D+E +
Sbjct: 1 LQGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALD 60
Query: 69 LQQVSVE 75
L + E
Sbjct: 61 LGNIRAE 67
>gi|183232189|ref|XP_001913674.1| U6 snRNA-associated Sm-like protein LSm8 [Entamoeba histolytica
HM-1:IMSS]
gi|169802157|gb|EDS89550.1| U6 snRNA-associated Sm-like protein LSm8, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407034977|gb|EKE37474.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449708988|gb|EMD48345.1| U6 snrnaassociated Sm family LSm8 protein [Entamoeba histolytica
KU27]
Length = 94
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE 64
G+ IG L D F N+VL +IER +I G+ I+RG+ ++++G +++EK+
Sbjct: 19 GKVYIGILTGYDNFMNIVLKNSIERTFSKEGVSNISCGLLILRGDEIMVIGGLNEEKD 76
>gi|417407452|gb|JAA50336.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 72
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 12 GYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVDKEKEHCPQLQ 70
G L+ DQ NL+L ++ ER+ +Q + + G++I+RG+NV ++GE+D+E + L
Sbjct: 1 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLG 60
Query: 71 QVSVE 75
+ E
Sbjct: 61 NIRAE 65
>gi|313222638|emb|CBY41662.1| unnamed protein product [Oikopleura dioica]
Length = 83
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
+ + R ++G L+ +DQ N+VL T ER+ G+++IRG+NV ++G VD+
Sbjct: 4 ISNKRVVVGILKGLDQVVNVVLANTEERVFTPEGVDRQALGLYLIRGDNVAVVGAVDENT 63
Query: 64 E 64
E
Sbjct: 64 E 64
>gi|296417819|ref|XP_002838548.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634491|emb|CAZ82739.1| unnamed protein product [Tuber melanosporum]
Length = 125
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V LRDGR LIG LRS DQ +T+ + Y R NV+L+GE+D
Sbjct: 29 VALRDGRKLIGVLRSWDQ-------QTLSCRVPSSAYTSGMR-------TNVLLLGEIDL 74
Query: 62 EKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
++E ++ SVE++ AQR K+ ++ K+L+ G
Sbjct: 75 DREDDIPFRRASVEEVFAAQRAIDTEKKRTDKVHRKKLRALGF 117
>gi|403221300|dbj|BAM39433.1| uncharacterized protein TOT_010000889 [Theileria orientalis
strain Shintoku]
Length = 162
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
V LRD +G +S DQF N+V+ +++I + ++ + DI G +IRGE++
Sbjct: 26 WVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVISSKRSFSDIYCGYTVIRGESISYFCS 85
Query: 59 VD 60
+D
Sbjct: 86 ID 87
>gi|387592500|gb|EIJ87524.1| hypothetical protein NEQG_02405 [Nematocida parisii ERTm3]
gi|387596986|gb|EIJ94606.1| hypothetical protein NEPG_00128 [Nematocida parisii ERTm1]
Length = 105
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGE 58
V+LRD + G LRS DQ+ N++L + + N+Y ++RGEN++L+GE
Sbjct: 23 FVVLRDNTYIKGILRSYDQYYNILLEDITQYVISNNEYLLTESESVLLRGENIILLGE 80
>gi|15218779|ref|NP_176747.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|79320777|ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|21592627|gb|AAM64576.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332196292|gb|AEE34413.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196293|gb|AEE34414.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 98
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L ++ ER+ + G++IIRG+N+ ++GE+D
Sbjct: 17 VITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQHVLGLYIIRGDNIGVIGELD 76
Query: 61 KE 62
+E
Sbjct: 77 EE 78
>gi|448532461|ref|XP_003870428.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis Co
90-125]
gi|380354783|emb|CCG24298.1| hypothetical protein CORT_0F00690 [Candida orthopsilosis]
Length = 101
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-----IPRGIFIIRGENVVLM 56
V+ D R G L D+ N++L +IERI Q D IP G+ I+RG +V +
Sbjct: 14 VITTDARFFEGVLEGFDKNTNIILSNSIERIIYSTQEIDETNEEIPSGVNIMRGNEIVCI 73
Query: 57 GEVD 60
GE+D
Sbjct: 74 GEID 77
>gi|308163178|gb|EFO65538.1| Hypothetical protein GLP15_5215 [Giardia lamblia P15]
Length = 107
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+V+ G G L D F N++L T +RI G Y DIP G ++RG+++ +
Sbjct: 24 LVVTAAGPQYFGTLTHYDGFGNVLLKDTAQRITNGTSYADIPMGWVLVRGDDIFAL 79
>gi|340521980|gb|EGR52213.1| predicted protein [Trichoderma reesei QM6a]
Length = 99
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + D NLVL +ERI ++P G++++RG+NV +
Sbjct: 13 LIVTADSRILVGELAACDASTNLVLKGAVERIIRTPDDPEPSAEVPLGLYLVRGDNVCSV 72
Query: 57 GEVDK 61
G VD+
Sbjct: 73 GLVDE 77
>gi|224005396|ref|XP_002296349.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586381|gb|ACI65066.1| human U6 snRNA-associated protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGE 58
+L DGR + G L DQ NL+L K+ E ++ + + + G+F++RG+NV ++G+
Sbjct: 15 ILTCDGRLITGILLGYDQLQNLILQKSYESVYSSDSPVEKVELGLFVVRGDNVAVVGD 72
>gi|449481049|ref|XP_004177249.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 132
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 12 GYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQ 70
G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV ++GE+D+E + L
Sbjct: 61 GTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLG 120
Query: 71 QVSVE 75
+ E
Sbjct: 121 NIRAE 125
>gi|346972184|gb|EGY15636.1| hypothetical protein VDAG_06800 [Verticillium dahliae VdLs.17]
Length = 177
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 27/101 (26%)
Query: 21 ANLVLHKTIERIHV-----------------------GNQYGDIPRGIFIIRGENVVLMG 57
ANLVL T+ER+ G Y DI RG+F++RGENV+L+G
Sbjct: 59 ANLVLQNTVERVFAPHPAPPRSDAAAATTPSPDQQPRGGLYADIKRGVFLVRGENVLLLG 118
Query: 58 EVDKEKEHCP----QLQQVSVEDILNAQRKEQEVKQERSRM 94
E+D +K+ P +L + V L RK+ + +E++R+
Sbjct: 119 EIDLDKDDDPPPGYELGEPEVVHRLAEARKDADKGKEKARL 159
>gi|50546088|ref|XP_500571.1| YALI0B06534p [Yarrowia lipolytica]
gi|49646437|emb|CAG82802.1| YALI0B06534p [Yarrowia lipolytica CLIB122]
Length = 97
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
V+ DGR ++G L+ DQ N++L T ER+ ++ + + G++++RG+ + +GE D
Sbjct: 14 VITTDGRLILGILQGYDQATNVILSNTRERVITPDEPTEVVDLGLYMLRGDCIACVGETD 73
Query: 61 KEKEHCPQLQQVSVEDI 77
E + Q +V E++
Sbjct: 74 LELDGSIQWGEVRGEEL 90
>gi|346322383|gb|EGX91982.1| small nuclear ribonucleoprotein Lsm8, putative [Cordyceps militaris
CM01]
Length = 128
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-------GIFIIRGENV 53
+++ D R L+G L + D N+VL IERI + D P G++I+RG+NV
Sbjct: 42 LIVTADSRILVGTLTACDNSTNIVLTNAIERII---RTPDDPEPSAIDSLGVYIVRGDNV 98
Query: 54 VLMGEVDKE 62
+G VD++
Sbjct: 99 CSIGLVDEQ 107
>gi|322709843|gb|EFZ01418.1| small nuclear ribonucleoprotein (LSM1) [Metarhizium anisopliae
ARSEF 23]
Length = 146
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 22 NLVLHKTIERIHV----------GNQYGDIPRGIFIIRGENVVLMGEV 59
NLVL T ERI Y DI GIF+IRGENV+L+GE+
Sbjct: 42 NLVLQSTTERIFALKPGTDPSAPEGYYADIAHGIFLIRGENVLLLGEI 89
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENV 53
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV
Sbjct: 259 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 311
>gi|224004692|ref|XP_002295997.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
gi|209586029|gb|ACI64714.1| human U6 snRNA-associated Sm-like protein LSm8-like protein
[Thalassiosira pseudonana CCMP1335]
Length = 106
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGE 58
+L DGR + G L DQ NL+L K+ E ++ + + + G+F++RG+NV ++G+
Sbjct: 15 ILTCDGRLITGILLGYDQLQNLILQKSYESVYSLDSPVEKVELGLFVVRGDNVAVVGD 72
>gi|448117816|ref|XP_004203349.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|448120256|ref|XP_004203932.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384217|emb|CCE78921.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
gi|359384800|emb|CCE78335.1| Piso0_000956 [Millerozyma farinosa CBS 7064]
Length = 101
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-----HVGNQYGDIPRGIFIIRGENVVLM 56
V+ D R G L D N++L IERI H NQ I G++I+RG NVV +
Sbjct: 16 VITTDARLFEGILEGYDNSTNIILKSCIERIINTSDHEHNQ--TIELGLYILRGGNVVCI 73
Query: 57 GEVDK 61
GE+D+
Sbjct: 74 GEIDE 78
>gi|300123521|emb|CBK24793.2| unnamed protein product [Blastocystis hominis]
Length = 108
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-GIFIIRGENVVLMGEV 59
++L DGRT G LR VDQ NL+L ERI + + + +++ RG++ L+G
Sbjct: 14 VILTNDGRTFTGMLRGVDQVTNLILEDVEERIFSQTEPMRVEKYDVYLFRGDDTSLIGLY 73
Query: 60 DKEKE 64
+EK+
Sbjct: 74 SEEKD 78
>gi|241955685|ref|XP_002420563.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223643905|emb|CAX41642.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 102
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-----HVGNQYGDIPRGIFIIRGENVVLM 56
V+ D R G L D+ N++L IERI G + +I G++I+RG +V +
Sbjct: 14 VITSDARFFEGKLEGYDKSTNIILSNCIERIIYSKDDEGEENEEISLGVYIMRGNEIVCV 73
Query: 57 GEVDKE 62
GE+D E
Sbjct: 74 GEIDDE 79
>gi|389631877|ref|XP_003713591.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|351645924|gb|EHA53784.1| hypothetical protein MGG_04539 [Magnaporthe oryzae 70-15]
gi|440467862|gb|ELQ37056.1| hypothetical protein OOU_Y34scaffold00619g29 [Magnaporthe oryzae
Y34]
gi|440478608|gb|ELQ59427.1| hypothetical protein OOW_P131scaffold01358g67 [Magnaporthe oryzae
P131]
Length = 101
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD---IPR---GIFIIRGENVV 54
+++ DGR LIG L + D AN++L+ ER H+ GD + R G IIRG ++
Sbjct: 14 VIMTTDGRMLIGTLINSDNQANIILYNVTER-HIAPADGDEDSVDRPSVGTEIIRGSTIL 72
Query: 55 LMGEVDKEKEHCPQLQQVSVEDI 77
++G VD+E E +V E I
Sbjct: 73 VVGLVDEELEGSIDWTKVRGEPI 95
>gi|400602793|gb|EJP70391.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 99
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + D N+VL +ERI P G++I+RG+NV +
Sbjct: 13 LIVTADSRILVGILTACDNSTNIVLSNAVERIIRTPDDPESSAIDPLGVYIVRGDNVCSI 72
Query: 57 GEVDKEKEHCPQLQQV 72
G VD++ + +V
Sbjct: 73 GLVDEKLDDSINWTEV 88
>gi|356554080|ref|XP_003545377.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38,
NatC auxiliary subunit-like [Glycine max]
Length = 116
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 40/61 (65%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+ DGR ++ L+ DQ N++L ++ ER++ + + G++I RG+N+ ++GE+D+
Sbjct: 36 VITNDGRNILXVLKGFDQATNIILDESHERVYSTKEGVQLVFGLYINRGDNISVVGELDE 95
Query: 62 E 62
+
Sbjct: 96 D 96
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
V GR +IG L+ DQ NLVL + E + N Y G+ ++RG + L+ VD
Sbjct: 36 VKFTGGREVIGVLKGYDQLLNLVLDEVEEEVSASNPYKKRSLGLVVLRGPTITLLSPVD 94
>gi|170041123|ref|XP_001848324.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864689|gb|EDS28072.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 123
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L ++ ER++ + + G+ IIRG+NV ++G++D
Sbjct: 14 IITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIGQLD 73
Query: 61 KE 62
+
Sbjct: 74 ES 75
>gi|156086694|ref|XP_001610756.1| LSM domain containing protein [Babesia bovis T2Bo]
gi|154798009|gb|EDO07188.1| LSM domain containing protein [Babesia bovis]
Length = 167
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
V LRD + +G +S DQ+ N+ L ++ ++ V + + D+ G IIRGE++
Sbjct: 31 WVTLRDETSYVGIFKSFDQYGNIFLTDSVRKVIVQAEGVFSDVYNGNLIIRGESIAYFCS 90
Query: 59 VDKEK 63
+D E
Sbjct: 91 LDAES 95
>gi|84998226|ref|XP_953834.1| hypothetical protein [Theileria annulata]
gi|65304831|emb|CAI73156.1| hypothetical protein, conserved [Theileria annulata]
Length = 161
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
V LRD +G +S DQF N+V+ +++I + ++ + DI G +IRGE++
Sbjct: 26 WVTLRDDTFYVGLFKSFDQFGNIVITDAVKKIVLNDKKSFSDIYCGYTVIRGESISYFCA 85
Query: 59 VD 60
+D
Sbjct: 86 LD 87
>gi|388514443|gb|AFK45283.1| unknown [Lotus japonicus]
Length = 98
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGE 58
V+ DGR ++G L+ DQ N++L ++ ER+ + I G++IIRG+N+ ++GE
Sbjct: 17 VITNDGRNIVGVLKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISVVGE 74
>gi|350296589|gb|EGZ77566.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 100
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ DGRTL+G L SVD N+ L + +ER+ +I G +IRG+ V L+G
Sbjct: 16 IITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHMIRGDTVCLVG 75
Query: 58 EVDKEKEHCPQLQQV 72
VD+ + +V
Sbjct: 76 LVDESLDESIDWTKV 90
>gi|388510216|gb|AFK43174.1| unknown [Lotus japonicus]
Length = 98
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGE 58
V+ DGR ++G L+ DQ N++L ++ ER+ + I G++IIRG+N+ ++GE
Sbjct: 17 VITNDGRNIVGILKGFDQATNIILDESHERVFSTKEGVQQIVLGLYIIRGDNISVVGE 74
>gi|344229634|gb|EGV61519.1| hypothetical protein CANTEDRAFT_124295 [Candida tenuis ATCC
10573]
Length = 98
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH----VGNQYGDIPRGIFIIRGENVVLMG 57
V+ D R G L +D N+V+ IERI ++Y + G++++RG VV +G
Sbjct: 14 VITTDARLFEGKLEGIDNATNIVISNCIERIARVKGTDDKYQQLDMGLYMLRGGTVVCIG 73
Query: 58 EVDKE 62
EVD+
Sbjct: 74 EVDES 78
>gi|170060880|ref|XP_001865997.1| LSM8 protein [Culex quinquefasciatus]
gi|167879234|gb|EDS42617.1| LSM8 protein [Culex quinquefasciatus]
Length = 95
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L ++ ER++ + + G+ IIRG+NV ++G++D
Sbjct: 14 IITADGRNFVGTLKGFDQTVNIILDESHERVYSMTAGIEQVVLGLHIIRGDNVAIIGQLD 73
Query: 61 KE 62
+
Sbjct: 74 ES 75
>gi|443924143|gb|ELU43214.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 74
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 9 TLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHCP 67
TL+G+ DQ +N+VL ++ERI+ + ++P G+++++G+ + L+GE+D +
Sbjct: 4 TLVGF----DQRSNVVLSDSVERIYSIEEGVEEVPLGLYLVKGDMIALIGEMDAAIDSAT 59
Query: 68 QLQQVSVEDI 77
L + E +
Sbjct: 60 DLSTIRAEPL 69
>gi|428673171|gb|EKX74084.1| conserved hypothetical protein [Babesia equi]
Length = 168
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGE 58
V LRD +G +S DQ+ N+V+ +++I V + + D+ G +IRGE++
Sbjct: 32 WVTLRDDTFYVGLFKSFDQYGNIVITDAVKKIIVNEKKSFSDLYCGYTVIRGESISYFCA 91
Query: 59 VD 60
+D
Sbjct: 92 ID 93
>gi|237833195|ref|XP_002365895.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211963559|gb|EEA98754.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221488357|gb|EEE26571.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii GT1]
gi|221508860|gb|EEE34429.1| small nuclear ribonucleoprotein, putative [Toxoplasma gondii VEG]
Length = 96
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 6 DGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVL 55
DGR +G L+ DQ NL+L K ERI+ V I G+++IRG+N+ +
Sbjct: 19 DGRVFVGTLKGFDQSTNLILDKCEERIYSVDAAVEQIALGLYLIRGDNIAV 69
>gi|380091971|emb|CCC10238.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 100
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
++ DGRTL+G L SVD N+ L + +ER+ +I G +IRG+ V L+G
Sbjct: 16 IITVDGRTLVGTLISVDMSTNVFLQRAVERVIRSPDDDEPSAEIELGTHMIRGDTVCLVG 75
Query: 58 EVDK 61
VD+
Sbjct: 76 LVDE 79
>gi|322698525|gb|EFY90294.1| small nuclear ribonucleoprotein (LSM1) [Metarhizium acridum CQMa
102]
Length = 146
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 10/48 (20%)
Query: 22 NLVLHKTIERIHV----------GNQYGDIPRGIFIIRGENVVLMGEV 59
NLVL T ERI Y D+ GIF+IRGENV+L+GE+
Sbjct: 42 NLVLQSTTERIFALKPGTDPSAPEGYYADVVHGIFLIRGENVLLLGEI 89
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E GN+ DI G+ +IRG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNEKNDI--GMVVIRGNSVVMI 70
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVV 54
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNVT 68
>gi|348671498|gb|EGZ11319.1| hypothetical protein PHYSODRAFT_519698 [Phytophthora sojae]
Length = 88
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEV 59
V+ DGR +IG L+ DQ N++L + ER+ + + G++I+RG+N+ ++G V
Sbjct: 7 VITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNISVIGGV 65
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E GN+ DI G+ +IRG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVMI 70
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR DQF NLV+ T+E GN+ DI G+ +IRG +VV++
Sbjct: 34 VKLNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVVMI 84
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L RT+IG LR D F N+VL T+E + Q I G+ +IRG ++V+M
Sbjct: 21 VKLNGNRTVIGILRGFDSFMNIVLKDTVEVTYPQEQ---INMGMVVIRGNSIVMM 72
>gi|31240533|ref|XP_320680.1| AGAP011837-PA [Anopheles gambiae str. PEST]
gi|21288006|gb|EAA00327.1| AGAP011837-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G L+ DQ N++L ++ ER++ + + G+ IIRG+N+ ++G++D
Sbjct: 14 IITADGRNFVGTLKGFDQTVNVILDESHERVYSMTAGIEQVVLGLHIIRGDNIAIIGQLD 73
Query: 61 KE 62
+
Sbjct: 74 ES 75
>gi|85000769|ref|XP_955103.1| U6 snRNA-associated Sm-like potein [Theileria annulata strain
Ankara]
gi|65303249|emb|CAI75627.1| U6 snRNA-associated Sm-like potein, putative [Theileria annulata]
Length = 113
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 6 DGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENV 53
DGR +G L+ DQ NLVL+ +ER+ H ++ GI+++RG+N+
Sbjct: 26 DGRVFVGVLKGFDQLTNLVLYNCLERVYHPDAPVEELELGIYLLRGDNM 74
>gi|294888449|ref|XP_002772471.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|294896670|ref|XP_002775673.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239876697|gb|EER04287.1| lsm1, putative [Perkinsus marinus ATCC 50983]
gi|239881896|gb|EER07489.1| lsm1, putative [Perkinsus marinus ATCC 50983]
Length = 113
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEV 59
+++ DG+ L+G DQ N+VL + ER++ + + G++++RG++VV +GEV
Sbjct: 31 LLVTADGKVLLGKFNGFDQSLNVVLSECKERVYSTVEGVETLHHGLYLVRGDDVVSIGEV 90
Query: 60 DKE 62
D++
Sbjct: 91 DED 93
>gi|256089000|ref|XP_002580607.1| lsm1 [Schistosoma mansoni]
gi|353231362|emb|CCD77780.1| putative lsm1, partial [Schistosoma mansoni]
Length = 72
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 12 GYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENVVLMGEVDKEKEHCPQLQ 70
G L+ D NLV+ + ER+ + +P G+FIIRG+NV ++GE+D++ +
Sbjct: 1 GTLKGFDNVVNLVIKDSHERVFSPTEGVEQVPLGLFIIRGQNVAVVGELDEDLDRRIDFS 60
Query: 71 QVSVEDI 77
Q+ E +
Sbjct: 61 QLRAEPL 67
>gi|238595225|ref|XP_002393704.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
gi|215461593|gb|EEB94634.1| hypothetical protein MPER_06519 [Moniliophthora perniciosa FA553]
Length = 112
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 1 MVLLRDGRTLI-----------------GYLRSVDQFANLVLHKTIERIHVGNQ-YGDIP 42
++L+DGR+++ G + DQ +N+VL + ER++ ++ +IP
Sbjct: 13 FLVLQDGRSIVASIHYQSPGSSFDFSSQGVMAGYDQKSNVVLSDSKERVYSMDEGVEEIP 72
Query: 43 RGIFIIRGENVVLMGEVDKEKEHCPQLQQVSVE 75
G+++++G+ ++L+GE+D+ + L + E
Sbjct: 73 VGLYLVKGDMIILIGEIDESVDQAVDLSTIRAE 105
>gi|255732651|ref|XP_002551249.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131535|gb|EER31095.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 98
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI---------HVGNQYGDIPRGIFIIRGEN 52
V+ D R G L D+ N++L IERI NQ +IP G++I+RG
Sbjct: 8 VITTDARFFEGILEGYDKSTNIILSNCIERIINSPEDEEEEEDNQ--EIPLGVYIMRGNE 65
Query: 53 VVLMGEVDKE 62
VV +GE+ E
Sbjct: 66 VVCIGEISDE 75
>gi|401408539|ref|XP_003883718.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
gi|325118135|emb|CBZ53686.1| U6 snRNA-associated protein LSm8-like protein,related [Neospora
caninum Liverpool]
Length = 115
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 6 DGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVDKEKE 64
DGR +G L+ DQ NL+L K ERI+ + I G+++IRG+N+ ++GEVD E +
Sbjct: 19 DGRVFVGTLKGFDQSTNLILDKCEERIYSLDAAVEQIALGLYLIRGDNIAVVGEVDVEVD 78
Query: 65 HCPQLQQV 72
QL V
Sbjct: 79 ESIQLSSV 86
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GRT+IG LR D F N+V+ ++IE G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRTVIGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|406700597|gb|EKD03763.1| u6 snRNA-associated sm-like protein lsm8 [Trichosporon asahii
var. asahii CBS 8904]
Length = 129
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENV 53
V+L DGR ++G L+ D + NL+L ++ER + ++ + I G+++I+G+NV
Sbjct: 14 VILYDGRIIVGRLKGNDNYCNLILSDSVEREYSADKGVEMISLGLYMIKGDNV 66
>gi|327273127|ref|XP_003221332.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 89
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENV 53
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV
Sbjct: 29 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 81
>gi|119872589|ref|YP_930596.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673997|gb|ABL88253.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 80
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN Y RG +IRGENV+ + V
Sbjct: 25 LVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIVIRGENVLFISPV 79
>gi|67540058|ref|XP_663803.1| hypothetical protein AN6199.2 [Aspergillus nidulans FGSC A4]
gi|40738795|gb|EAA57985.1| hypothetical protein AN6199.2 [Aspergillus nidulans FGSC A4]
gi|259479607|tpe|CBF69985.1| TPA: small nuclear ribonucleoprotein (LSM1), putative
(AFU_orthologue; AFUA_2G11800) [Aspergillus nidulans
FGSC A4]
Length = 155
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 26/91 (28%)
Query: 40 DIPRGIFIIRGENVVLMGEV--------------------------DKEKEHCPQLQQVS 73
+IPRG+F++RGENV+L+GE+ DKE + P L + +
Sbjct: 55 NIPRGVFLVRGENVLLLGEIVRSSWPQYTGTIIKMLTCGFSYLQDLDKEDDIPPNLIKAT 114
Query: 74 VEDILNAQRKEQEVKQERSRMLAKRLKERGL 104
+++ ++KE ++ + +L+E G
Sbjct: 115 FKEVFELKKKEDNERKSHDKKRNNKLQELGF 145
>gi|70944071|ref|XP_742007.1| u6 snRNA-associated sm-like protein [Plasmodium chabaudi
chabaudi]
gi|56520743|emb|CAH81648.1| u6 snRNA-associated sm-like protein, putative [Plasmodium
chabaudi chabaudi]
Length = 65
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 18 DQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKE 62
DQ N++L ERI+ I GI+IIRG+NV L+GE+D+E
Sbjct: 1 DQTTNIILGNCYERIY-KESLEKISLGIYIIRGDNVTLIGEIDEE 44
>gi|18312179|ref|NP_558846.1| small nuclear ribonucleoprotein (Sm-like) [Pyrobaculum aerophilum
str. IM2]
gi|18159615|gb|AAL63028.1| small nuclear ribonucleoprotein homolog (Sm-like) [Pyrobaculum
aerophilum str. IM2]
Length = 80
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN Y RG ++RGENV+ + V
Sbjct: 25 LVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMVVRGENVLFISPV 79
>gi|14277786|pdb|1I8F|A Chain A, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277787|pdb|1I8F|B Chain B, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277788|pdb|1I8F|C Chain C, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277789|pdb|1I8F|D Chain D, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277790|pdb|1I8F|E Chain E, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277791|pdb|1I8F|F Chain F, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277792|pdb|1I8F|G Chain G, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|29726402|pdb|1LNX|A Chain A, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726403|pdb|1LNX|B Chain B, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726404|pdb|1LNX|C Chain C, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726405|pdb|1LNX|D Chain D, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726406|pdb|1LNX|E Chain E, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726407|pdb|1LNX|F Chain F, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726408|pdb|1LNX|G Chain G, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
Length = 81
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN Y RG ++RGENV+ + V
Sbjct: 25 LVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTMVVRGENVLFISPV 79
>gi|397521397|ref|XP_003830783.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan
paniscus]
gi|410041702|ref|XP_003951296.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|426359376|ref|XP_004046952.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|67972214|dbj|BAE02449.1| unnamed protein product [Macaca fascicularis]
Length = 44
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 20/21 (95%)
Query: 1 MVLLRDGRTLIGYLRSVDQFA 21
+VLLRDGRTLIG+LRS+DQF
Sbjct: 19 LVLLRDGRTLIGFLRSIDQFG 39
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVIDNTVE--VNGNDKTDI--GMVVIRGNSVVMI 70
>gi|171184523|ref|YP_001793442.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170933735|gb|ACB38996.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 80
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN Y RG ++RGENV+ + V
Sbjct: 25 LVKLRDSHEIRGILRSFDQHVNLLLDDA-EEIIDGNVY---KRGTIVVRGENVLFISPV 79
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMI 70
>gi|302409510|ref|XP_003002589.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261358622|gb|EEY21050.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 221
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 35 GNQYGDIPRGIFIIRGENVVLMGEV 59
G Y DI RG+F++RGENV+L+GE+
Sbjct: 150 GGLYADIKRGVFLVRGENVLLLGEI 174
>gi|340914656|gb|EGS17997.1| U6 snrna-associated sm-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 98
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLMG 57
V+ +GRT++G L + D N+VL +ER+ ++P G+++IRG+ V ++G
Sbjct: 14 VITIEGRTIVGTLVAHDHNTNIVLKGAVERVIRTPDDPEPSVEVPLGLYMIRGDTVCVVG 73
Query: 58 EVDK 61
VD+
Sbjct: 74 HVDE 77
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENV 53
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L+ R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LKANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|340059633|emb|CCC54026.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma vivax Y486]
Length = 81
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVV 54
M+ L+ GR++ G LR VDQF ++VLH ++ G ++ P G+ +IRG +V
Sbjct: 19 MLKLQGGRSVSGELRGVDQFMSVVLHDAVDESQRGSDSEGEKTPLGVAVIRGSMIV 74
>gi|312380997|gb|EFR26852.1| hypothetical protein AND_25852 [Anopheles darlingi]
Length = 95
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH-VGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR +G ++ DQ N++L ++ ER++ + + G+ IIRG+NV ++G +D
Sbjct: 14 IITADGRNFVGTMKGFDQTINIILDESHERVYSMSTGIEQVVLGLHIIRGDNVAIIGLLD 73
Query: 61 KE 62
+
Sbjct: 74 ES 75
>gi|399217457|emb|CCF74344.1| unnamed protein product [Babesia microti strain RI]
Length = 499
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--YGDIPRGIFIIRGENVVLMGEV 59
V LRD +G ++ DQ+ N+VL +++I V + + D+ G IIRGE++ +
Sbjct: 28 VSLRDDTFYVGIFKTFDQYGNVVLSDAVQKIVVPEKRIFSDLYNGHLIIRGESIAYFCAI 87
Query: 60 DKEK 63
D +
Sbjct: 88 DTAR 91
>gi|167392087|ref|XP_001740010.1| lsm1 [Entamoeba dispar SAW760]
gi|165896050|gb|EDR23590.1| lsm1, putative [Entamoeba dispar SAW760]
Length = 94
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V+ G+ IG L D N+VL ++ER +I G+ I+RG+ ++++G +++
Sbjct: 14 VITTLGKVYIGILTGYDNPMNIVLKNSVERTFSKEGVSNISCGLLILRGDEIMVIGGLNE 73
Query: 62 EKEH 65
EK++
Sbjct: 74 EKDN 77
>gi|189199402|ref|XP_001936038.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983137|gb|EDU48625.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 212
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 16/99 (16%)
Query: 22 NLVLHKTIERIHVGNQYG------DIPR---------GIFIIRGENVVLMGEVDKEKEHC 66
NLVL + ERI N IPR G+ IRGENV + VD ++E
Sbjct: 106 NLVLTECYERIAARNPDAQPSSDPSIPRWLINDVKLPGVMTIRGENVTICATVDLDREEY 165
Query: 67 PQLQQVSVEDILNAQRKEQEV-KQERSRMLAKRLKERGL 104
P+ + + ED + + Q+ K+E AK LK+ G+
Sbjct: 166 PKGAKFAEEDQVRSLAASQKAEKKEVDSRKAKALKQAGI 204
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 2 [Brachypodium distachyon]
Length = 81
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+ R +IG LR DQF NLV+ T+E GN+ DI G+ ++RG +VV++
Sbjct: 22 MNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVVRGNSVVMI 70
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
M+ L R ++G LR DQF NLVL T+E GN+ +I G+ +IRG +V ++
Sbjct: 19 MIKLNANRVVVGVLRGFDQFMNLVLDNTME--ISGNERTEI--GMVVIRGNSVAMI 70
>gi|330835854|ref|YP_004410582.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
gi|329567993|gb|AEB96098.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
Length = 75
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V L+ + + GYL+S DQ NLVL ++E + N + G +IRG+NV+L+ +
Sbjct: 18 LVKLKGNKEVRGYLKSYDQHMNLVLSDSVE---IQNNNDEKKMGTIVIRGDNVILISPI 73
>gi|281200600|gb|EFA74818.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 103
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+VL DGR ++G LR +DQ N++L ERI+ G+ II+G++V
Sbjct: 16 LVLTADGRNIVGTLRGLDQMINVILEHCHERIYTDEGVEIFNLGVHIIKGDDV 68
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 21/107 (19%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV + + E
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVVTVEAL--EP 75
Query: 64 EHCPQLQQVSVEDI-------------LNAQ--RKEQEVKQERSRML 95
P L V ++ +NA +KE E + R R+L
Sbjct: 76 ACFPYLDNVVXCNVKENVLVVDLKIRPVNASDNQKESETPEWRGRIL 122
>gi|374327713|ref|YP_005085913.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
gi|356642982|gb|AET33661.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
Length = 57
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN Y RG ++RGENV+ + V
Sbjct: 2 LVKLRDSHEIRGILRSFDQHVNLLLEDA-EEIIDGNVY---KRGTVVVRGENVLFISPV 56
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 14 VKLNANRVVIGTLRGFDQFMNLVIDNTVEV--NGNDKTDI--GMVVIRGNSVVMI 64
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 8 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 26 RVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMI 70
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|344229144|gb|EGV61030.1| U6 snRNA-associated Sm-like protein LSm6 [Candida tenuis ATCC
10573]
gi|344229145|gb|EGV61031.1| hypothetical protein CANTEDRAFT_116192 [Candida tenuis ATCC
10573]
Length = 83
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI---HVGNQYGDIPRGIFIIRGENVVLMGE 58
V L +G + +G L+S+D F N+V+ T E I G +YGD+ IRG NV+ + +
Sbjct: 28 VKLNNGVSYVGNLQSIDGFMNIVMDTTAEFIGGAASGTKYGDV-----FIRGNNVLYISK 82
Query: 59 V 59
V
Sbjct: 83 V 83
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ-YGDIPRGIFIIRGENV 53
V+ DGR ++G L+ DQ NL+L ++ ER+ +Q + G++I+RG+NV
Sbjct: 15 VITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRGDNV 67
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNGNRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR ++G LR DQF NLVL T+E G + +I G+ +IRG +VV++
Sbjct: 22 LNAGRNVVGVLRGFDQFMNLVLDNTVE--VQGAEKNEI--GMVVIRGNSVVMI 70
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R ++G LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 38 LNANRVVVGTLRGFDQFMNLVIDNTMEV--NGNDKNDI--GMVVIRGNSVVMI 86
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R ++G LR DQF NLV+ T+E GN DI G+ ++RG +VV++
Sbjct: 22 LNANRVIVGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVVRGNSVVMI 70
>gi|410988918|ref|XP_004000722.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
Length = 123
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ +GR ++G L+ DQ NL+L E++ +Q + + G++ + +NV ++GE+D
Sbjct: 49 IIPSNGRMIVGTLKGFDQTINLILDGNHEQVFSSSQGVELVVLGLYTVTSDNVAVIGEID 108
Query: 61 KEKEH 65
+E +
Sbjct: 109 EETDS 113
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Glycine max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR +IG LR D F N+V+ +++E G+Q G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRHVIGILRGFDPFMNMVIDESVEECKDGSQNN---IGMVVIRGNSVIMLEALDR 75
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLV+ + IE+ G Q G+ ++RG ++ L+ +D+
Sbjct: 21 LNGGRVVTGTLRGFDPFMNLVVDEAIEQCKTGEQNS---IGMVVVRGNSITLLEALDR 75
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E GN DI G+ ++RG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVVDNTVE--VNGNDRNDI--GMVVLRGNSVVMI 70
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 8 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 13 RVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMI 57
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
Length = 80
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R +IG LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRLVIGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVV 68
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLVL +++E G Q +I G+ +IRG +++++ +D+
Sbjct: 21 LNAGRAVTGVLRGFDPFMNLVLDESVEECKDG-QRNNI--GMVVIRGNSIIMLESLDR 75
>gi|145590308|ref|YP_001152310.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005411|ref|YP_005261083.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145282076|gb|ABP49658.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160864|gb|AFA40476.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 80
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G LRS DQ NL+L E I GN + RG ++RGENV+ + V
Sbjct: 25 LVKLRDSHEIRGVLRSFDQHVNLLLEDA-EEIIDGNVF---KRGTIVVRGENVLFISPV 79
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|125976760|ref|XP_001352413.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|195170789|ref|XP_002026194.1| GL16212 [Drosophila persimilis]
gi|54641159|gb|EAL29909.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|194111074|gb|EDW33117.1| GL16212 [Drosophila persimilis]
Length = 95
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ + ER+ + I G+ IIRG+N+ ++G +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTSSGIEQIVLGLHIIRGDNIAVIGLID 73
Query: 61 KE 62
+
Sbjct: 74 ES 75
>gi|195645046|gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 73
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 8 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
R +IG LR DQF NLV+ T+E GN DI G+ +IRG +VV++
Sbjct: 19 RVVIGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSVVMI 63
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGNEKTDI--GMVVIRGNSVV 68
>gi|346978215|gb|EGY21667.1| hypothetical protein VDAG_03107 [Verticillium dahliae VdLs.17]
Length = 99
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERI----HVGNQYGDIPRGIFIIRGENVVLM 56
+++ D R L+G L + D NL L ER+ ++P G++++RG+NV +
Sbjct: 13 LIITADSRILVGNLVASDNNTNLALSDAHERVIQTPDADEPSVEVPLGLYMVRGDNVCTI 72
Query: 57 GEVDKE 62
G VD++
Sbjct: 73 GLVDEQ 78
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLV+ +++E I G ++ G+ +IRG +++++ +D+
Sbjct: 21 LNGGRQVTGVLRGYDPFMNLVMDESVEEISGGEKH---QIGMVVIRGNSIIMLEALDR 75
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R ++G LR DQF NLVL T+E GN+ +I G+ +IRG +VV++
Sbjct: 22 LNANRVVVGTLRGFDQFMNLVLDGTVE--VNGNERNEI--GMVVIRGNSVVMI 70
>gi|388579060|gb|EIM19389.1| Sm-like ribonucleo protein [Wallemia sebi CBS 633.66]
Length = 179
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIE--RIHVGNQYGDIPR------GIFIIRGENV 53
V L D R L+G + + D+ NLVL TIE R+ + GDIP+ G+ ++RGE +
Sbjct: 21 VTLNDTRQLVGQMLAFDRHMNLVLVDTIEFRRLKGPSSQGDIPKEMKRALGLIVLRGETI 80
Query: 54 V 54
+
Sbjct: 81 I 81
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRDG T+ G L++ DQ NL+L T E I + I RG+ +IRG+ V+ + +
Sbjct: 22 LVKLRDGTTIRGTLKNYDQHMNLLLDDTEEII---DPKTSIKRGMVVIRGDTVLFVSPI 77
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMIVGTLRGFDQFMNLVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|209879283|ref|XP_002141082.1| small nuclear ribonucleoprotein G [Cryptosporidium muris RN66]
gi|209556688|gb|EEA06733.1| small nuclear ribonucleoprotein G, putative [Cryptosporidium
muris RN66]
Length = 81
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R ++G LR D F NLVL T+E GN+ G IIRG +VV+ +DK
Sbjct: 24 LNGKRHIVGLLRGYDNFMNLVLENTVEVTSKGNK----EIGTVIIRGNSVVMWECLDK 77
>gi|195435808|ref|XP_002065871.1| GK20525 [Drosophila willistoni]
gi|194161956|gb|EDW76857.1| GK20525 [Drosophila willistoni]
Length = 95
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGD-IPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ + ER+ + I G+ IIRG+N+ ++G +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTAGTEQIVLGLHIIRGDNIAVIGLID 73
Query: 61 K 61
+
Sbjct: 74 E 74
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLVL +++E G Q ++ G+ +IRG +++++ +D+
Sbjct: 21 LNAGRAVTGVLRGFDPFMNLVLDESVEECKDG-QRNNV--GMVVIRGNSIIMLESLDR 75
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL +T+E G ++ DI G+ ++RG ++VL+ D+
Sbjct: 21 LNGSRVITGILRGFDPFMNLVLDETVEETKGGEKH-DI--GMVVVRGNSIVLLESQDR 75
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF N+V+ T+E GN+ DI G+ +IRG +VV
Sbjct: 22 LNANRMIVGTLRGYDQFMNMVVDNTVE--VNGNEKNDI--GMVVIRGNSVV 68
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR ++G LR DQF NLVL T+E I+ G +I G+ +IRG +VV++
Sbjct: 22 LNAGRNVVGVLRGFDQFMNLVLDNTVE-IN-GADRNEI--GMVVIRGNSVVMI 70
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR ++G LR D F NLV+ +T+E + G++ G+ ++RG +++++
Sbjct: 21 LNGGRNIVGILRGFDPFMNLVIDETVEEVKDGSKNN---IGMVVVRGNSIIML 70
>gi|24655606|ref|NP_647660.1| CG2021 [Drosophila melanogaster]
gi|194747038|ref|XP_001955961.1| GF24963 [Drosophila ananassae]
gi|194864976|ref|XP_001971199.1| GG14562 [Drosophila erecta]
gi|195336718|ref|XP_002034980.1| GM14170 [Drosophila sechellia]
gi|195490564|ref|XP_002093192.1| GE20916 [Drosophila yakuba]
gi|195587050|ref|XP_002083278.1| GD13439 [Drosophila simulans]
gi|7292155|gb|AAF47567.1| CG2021 [Drosophila melanogaster]
gi|68051537|gb|AAY85032.1| IP05684p [Drosophila melanogaster]
gi|190623243|gb|EDV38767.1| GF24963 [Drosophila ananassae]
gi|190652982|gb|EDV50225.1| GG14562 [Drosophila erecta]
gi|194128073|gb|EDW50116.1| GM14170 [Drosophila sechellia]
gi|194179293|gb|EDW92904.1| GE20916 [Drosophila yakuba]
gi|194195287|gb|EDX08863.1| GD13439 [Drosophila simulans]
gi|220951344|gb|ACL88215.1| CG2021-PA [synthetic construct]
Length = 95
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ + ER+ + I G+ IIRG+N+ ++G +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLID 73
Query: 61 K 61
+
Sbjct: 74 E 74
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR D F N+VL +E + G + +P G+ +IRG +VV++
Sbjct: 18 VQLNGNRKVIGVLRGYDVFMNIVLDDAVEEKNGGEK---VPLGMVVIRGNSVVML 69
>gi|365991154|ref|XP_003672406.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
gi|343771181|emb|CCD27163.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
Length = 85
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIP-----RGIFIIRGENVVLM 56
V LR R+L+G L++ D N+VL IE I+ + GD+ + +RG+ V L+
Sbjct: 20 VKLRGARSLVGTLQAFDSHCNIVLSDAIETIYELDDEGDLQSVERNSEMIFVRGDTVTLI 79
Query: 57 GEVDKE 62
D+E
Sbjct: 80 TTPDEE 85
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLVL +E + GN+ I G+ +IRG ++V M +D+
Sbjct: 21 LNGGRHVSGVLRGYDPFMNLVLDDAVENVS-GNEKHAI--GMVVIRGNSIVTMEALDR 75
>gi|402077934|gb|EJT73283.1| hypothetical protein GGTG_10128 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 101
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR------GIFIIRGENVV 54
++L DGR ++G L + D +N++L ER HV GD G IIRG ++
Sbjct: 14 VILTTDGRFIMGTLVNSDNQSNVILTNVTER-HVAPHDGDSDTVDRPSVGAEIIRGATIL 72
Query: 55 LMGEVDKEKE---HCPQLQQVSVEDILNA 80
L+G +D E + P+++ + D NA
Sbjct: 73 LVGLLDDALEQSINWPKVRGEPIGDTYNA 101
>gi|301096191|ref|XP_002897193.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
gi|262107278|gb|EEY65330.1| hypothetical protein PITG_16975 [Phytophthora infestans T30-4]
Length = 93
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENV 53
V+ DGR +IG L+ DQ N++L + ER+ + + G++I+RG+N+
Sbjct: 36 VITNDGRNIIGVLKGFDQCVNVILDDSFERVFSLKEPVEAVELGLYIVRGDNM 88
>gi|195125357|ref|XP_002007145.1| GI12774 [Drosophila mojavensis]
gi|193918754|gb|EDW17621.1| GI12774 [Drosophila mojavensis]
Length = 95
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ + ER+ + I G+ IIRG+N+ ++G +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLID 73
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Nasonia vitripennis]
Length = 76
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR +IG LR D F N+V+ ++IE G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|126460744|ref|YP_001057022.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250465|gb|ABO09556.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 80
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
+V LRD + G L++ DQ NL+L E I GN Y RG ++RGENV+ + V
Sbjct: 25 LVKLRDSHEIRGILKAFDQHVNLLLDDA-EEIIDGNVY---KRGTIVVRGENVLFISPV 79
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL T+E N +I G+ +IRG ++V++ +D
Sbjct: 43 MLKLNGGRAVTGILRGFDPFMNVVLDDTVEECK-DNTKNNI--GMVVIRGNSIVMVEALD 99
Query: 61 K 61
+
Sbjct: 100 R 100
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR +IG LR D F N+V+ ++IE G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|195403403|ref|XP_002060279.1| GJ16072 [Drosophila virilis]
gi|194140618|gb|EDW57092.1| GJ16072 [Drosophila virilis]
Length = 95
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-HVGNQYGDIPRGIFIIRGENVVLMGEVD 60
++ DGR IG L+ DQ N+++ + ER+ + I G+ IIRG+N+ ++G +D
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERVFSTTSGIEQIVLGLHIIRGDNIAVIGLID 73
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL TIE N I G+ +IRG ++V++ +D
Sbjct: 18 MLKLNGGRAVTGILRGFDPFMNVVLDDTIEECK-DNTKNSI--GMVVIRGNSIVMVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL T+E N +I G+ +IRG ++V++ +D
Sbjct: 18 MLKLNGGRAVTGILRGFDPFMNVVLDDTVEECK-DNTKNNI--GMVVIRGNSIVMVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL T+E N +I G+ +IRG ++V++ +D
Sbjct: 18 MLKLNGGRAVTGILRGFDPFMNVVLDDTVEECK-DNTKNNI--GMVVIRGNSIVMVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR DQF NLV+ T+E G++ DI G+ ++RG +VV++
Sbjct: 22 LNANRVVIGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVLRGNSVVMI 70
>gi|195011534|ref|XP_001983196.1| GH15765 [Drosophila grimshawi]
gi|193896678|gb|EDV95544.1| GH15765 [Drosophila grimshawi]
Length = 95
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYG--DIPRGIFIIRGENVVLMGEV 59
++ DGR IG L+ DQ N+++ + ER+ G I G+ IIRG+N+ ++G V
Sbjct: 14 IITADGRNFIGTLKGFDQTINIIIDECHERV-FSTTAGIEQIVLGLHIIRGDNIAVIGLV 72
Query: 60 D 60
D
Sbjct: 73 D 73
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G
[Tribolium castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR ++G LR D F NLV+ +++E G + G+ +IRG ++V++ +D+
Sbjct: 21 LNGGRQVVGILRGFDPFMNLVVDESVEECRDGKKNN---IGMVVIRGNSIVMLEALDR 75
>gi|440583672|emb|CCH47178.1| similar to small nuclear ribonucleoprotein G-like [Lupinus
angustifolius]
Length = 88
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E GN+ DI G+ +IRG +VV
Sbjct: 31 LNANRMIVGTLRGFDQFMNLVVDNTVEV--NGNEKTDI--GMVVIRGNSVV 77
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL +T+E+I G N G+ +IRG++V+ + +D+
Sbjct: 21 LNANRQVAGVLRGFDPFMNLVLDETVEKIKDGVVNSI-----GMVVIRGDSVLTIEALDR 75
Query: 62 EKEH 65
+H
Sbjct: 76 IDQH 79
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex
echinatior]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR ++G LR D F N+V+ ++IE G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRRVVGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E G++ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKNDI--GMVVIRGNSVV 68
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLV+ ++IE G + G+ +IRG ++V++ +D+
Sbjct: 21 LNGGRQVTGILRGFDPFMNLVVDESIEECRDGTKNN---IGMVVIRGNSIVMLEALDR 75
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL T+E N I G+ +IRG ++V++ +D
Sbjct: 18 MLKLNGGRAVTGILRGFDPFMNVVLDDTVEECK-DNTKNSI--GMVVIRGNSIVMVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|241594929|ref|XP_002404416.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
gi|215500409|gb|EEC09903.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
Length = 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL +T+E G ++ DI G+ ++RG ++VL+ D+
Sbjct: 20 LNGSRVITGILRGFDPFMNLVLDETVEETKGGEKH-DI--GMVVVRGNSIVLLESQDR 74
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L DGR + G L+ D F NLV+ + +E G Q G+ +IRG N++++
Sbjct: 126 LNDGRHVQGILQGFDPFMNLVIDECVEMATSGQQNN---IGMVVIRGNNIIML 175
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR ++G LR D F N+V+ ++IE G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRHVVGILRGFDPFMNMVIDESIEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus
floridanus]
Length = 76
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR +IG LR D F N+V+ +++E G + G+ +IRG +V+++ +D+
Sbjct: 21 LNGGRHVIGILRGFDPFMNMVIDESVEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL +T+E G ++ G+ ++RG ++VL+ D+
Sbjct: 21 LNGSRVITGILRGFDPFMNLVLDETVEEAKGGEKHN---IGMVVVRGNSIVLLESQDR 75
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL TIE N +I G+ +IRG ++V++ +D
Sbjct: 18 MLKLNGGRAVNGILRGFDPFMNVVLDDTIEECK-DNTKNNI--GMVVIRGNSIVMVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|440493817|gb|ELQ76243.1| U1 snRNP component [Trachipleistophora hominis]
Length = 89
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR--GIFIIRGENVVLMGEV 59
V L D R+ G L +VD+F N+VL++T+E+ N+ G R G+ I RG V+ + V
Sbjct: 15 VELEDKRSFTGNLLAVDEFLNIVLNETVEQRKYKNKKGYEIRNLGLCIFRGSKVIGIKTV 74
Query: 60 -DKEK 63
D EK
Sbjct: 75 GDSEK 79
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
V L R +IG LR D F N+VL + +E G + + G+ +IRG +VV++ ++
Sbjct: 17 FVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEGGEK---VRLGMVVIRGNSVVMLEALE 73
Query: 61 KEKEHCPQLQQVSVEDI 77
+ PQ V+ E +
Sbjct: 74 RIGGRRPQPPAVNGESL 90
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M+ L GR + G LR D F N+VL TIE + G+ +IRG ++VL+ +D
Sbjct: 18 MLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKDKTKNN---VGMVVIRGNSIVLVEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R++ G LR D F NLV+ T+E + +I G+ +IRG +VVLM +D+
Sbjct: 21 LNCNRSVTGILRGFDPFMNLVIDDTVENTST-QERNNI--GMVVIRGNSVVLMEALDR 75
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos
saltator]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F N+V+ +T+E G + G+ +IRG +V+++ +D+
Sbjct: 21 LNAGRHVTGILRGFDPFMNMVIDETVEECKDGTKNN---IGMVVIRGNSVIMLEALDR 75
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E G++ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGNSVV 68
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E G++ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVIRGNSVV 68
>gi|340508672|gb|EGR34332.1| hypothetical protein IMG5_016230 [Ichthyophthirius multifiliis]
Length = 1010
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIE-RIHVGNQYGDIPR------GIFIIRGENVV 54
V + DGR L+G + D+ NLV+ +T E R + GD R G+ IIRGEN++
Sbjct: 848 VTILDGRMLVGTFLAFDKHLNLVISETEEFRPIKPKKKGDPERQTKRILGLVIIRGENII 907
Query: 55 LMGEVDKEKEHCPQLQQVSV 74
+ P QQV++
Sbjct: 908 SIN------AEAPPNQQVNI 921
>gi|429966424|gb|ELA48421.1| hypothetical protein VCUG_00030 [Vavraia culicis 'floridensis']
Length = 89
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR--GIFIIRGENVVLMGEVDK 61
L D R IG L ++D+F N+VL+ T E N+ G R G+ + RG V+ + VDK
Sbjct: 17 LEDRRFFIGNLLAIDEFLNIVLNDTEEHRKYKNKKGYETRNLGLCVFRGSKVIGIKTVDK 76
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 8 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
R +IG LR DQF NLV+ +E GN DI G+ +IRG +VV++
Sbjct: 26 RVVIGTLRGFDQFMNLVVDNIVE--VNGNDKTDI--GMVVIRGNSVVMI 70
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL +T+E G ++ G+ ++RG ++VL+ D+
Sbjct: 21 LNGSRVVTGILRGFDPFMNLVLDETVEETKGGEKHN---IGMVVVRGNSIVLLESQDR 75
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+ RT++G LR D F N+VL T+E++ + + G+ +IRG +VV+M
Sbjct: 21 INGNRTVVGTLRGFDPFMNIVLDDTVEQV---SSKENNHLGMVVIRGNSVVMM 70
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL + IE G++ P G +IRG ++V++ D+
Sbjct: 23 LNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTIVIRGNSIVMLEAKDR 77
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L+ GR + G LR D F NLV+ E + G + P G+ +IRG +V M +D ++
Sbjct: 21 LQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGNSVSAMELLDNQR 77
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ +IE I G Q P G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVVDDSIE-ISAGGQQN--PIGMVVIRGNSIIML 70
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 8 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
R +IG LR DQF NLV+ +E GN DI G+ +IRG +VV++
Sbjct: 13 RVVIGTLRGFDQFMNLVVDNIVE--VNGNDKTDI--GMVVIRGNSVVMI 57
>gi|406608168|emb|CCH40602.1| Small nuclear ribonucleoprotein-associated protein
[Wickerhamomyces ciferrii]
Length = 113
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-GIFIIRGENVVLMGEVD 60
V+ DG+ +G L D NL+L +T ER+ ++ I G+ +IRG+ V +G VD
Sbjct: 29 VITTDGKYFVGILEGFDHLTNLILTETQERVIYQDEESIIEDLGLQVIRGDLVSCVGLVD 88
Query: 61 KE 62
+E
Sbjct: 89 EE 90
>gi|430812263|emb|CCJ30291.1| unnamed protein product [Pneumocystis jirovecii]
Length = 121
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-----GIFIIRGENVVLMGEVDK 61
GR ++G L+ D NLVL + IE + ++ G+I G+ +IRG ++L +D
Sbjct: 50 GREIVGILKGYDLLMNLVLDEVIENLR--DEDGNITDQKRQLGLVVIRGTTLILFSPIDG 107
Query: 62 EKE-HCPQLQQVSV 74
+E P L+Q+ +
Sbjct: 108 SEEIKNPFLEQIKI 121
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R +IG LR D F N+VL + E G + +P G+ +IRG +VV++
Sbjct: 30 LNGNRKVIGILRGYDVFMNIVLDEAFEEKEGGEK---VPIGMSVIRGNSVVML 79
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L+ GR + G LR D F NLV+ E + G + P G+ +IRG +V M +D ++
Sbjct: 21 LQGGRQISGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVIRGNSVSAMELLDNQR 77
>gi|84043708|ref|XP_951644.1| small nuclear ribonucleoprotein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|33348587|gb|AAQ15912.1| small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359749|gb|AAX80180.1| small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei]
gi|261326554|emb|CBH09515.1| small nuclear ribonucleoprotein SmD1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 109
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDI---PR---GIFIIRGENV-- 53
V L DGR + G + D+F N+VL T+E + D P+ G+ ++RGE V
Sbjct: 16 VTLVDGREMTGKMLLFDKFMNVVLADTVETRKETKKMKDAGISPQRKLGMILLRGEYVVA 75
Query: 54 --VLMGEVDKEKEHCPQLQQVSVEDILNAQRK 83
VL V ++K + + E + A+RK
Sbjct: 76 VSVLKDNVSEDKAQPANFESATREKLAGAKRK 107
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis
subvermispora B]
Length = 93
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE 64
GR + G L+ DQ NLVL + E++ + G+ ++RG V L+ VD +E
Sbjct: 27 GREVTGVLKGYDQLLNLVLDEVEEQLQTEGELKTRSLGLVVLRGPTVTLLSPVDGWEE 84
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLVL + IE G++ P G +IRG ++V++ D+
Sbjct: 23 LNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRN---PVGTVVIRGNSIVMLEAKDR 77
>gi|358339525|dbj|GAA47572.1| small nuclear ribonucleoprotein F [Clonorchis sinensis]
Length = 83
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKT---IERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V L+ G GYL SVD++ NL LH T I+ H G+ G +IR NV+ +
Sbjct: 21 IVKLKWGMEYKGYLVSVDRYMNLQLHSTDEYIDNCHTGS------LGEVLIRCNNVLYIR 74
Query: 58 EVDKE 62
E D E
Sbjct: 75 ECDDE 79
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein
[Crassostrea ariakensis]
Length = 77
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVG--NQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLV+ + IE +G NQ G+ ++RG +++L+ +D+
Sbjct: 21 LNGGRQIQGILRGFDPFMNLVVDECIEETKLGERNQI-----GMVVVRGNSIILLEALDR 75
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ +IE I G Q I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVVDDSIE-ISAGGQQNSI--GMVVIRGNSIIML 70
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L+ GR + G LR D F NLVL IE + P G +IRG +V LM
Sbjct: 18 FVHLQGGRKVSGTLRGFDIFLNLVLDDAIEETTPAQKS---PIGNVVIRGNSVTLM 70
>gi|296425521|ref|XP_002842289.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638552|emb|CAZ86480.1| unnamed protein product [Tuber melanosporum]
Length = 80
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI--HVGNQYGDIPRGIFIIRGENVVLMGE 58
V L G G L SVD + N+ L KT+E + V N+YGD+ IRG NV+ + +
Sbjct: 24 VKLNSGVEYKGELSSVDGYMNIALEKTVEYVGGQVRNRYGDV-----FIRGNNVLYISQ 77
>gi|149238445|ref|XP_001525099.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451696|gb|EDK45952.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 96
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 10/79 (12%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQ--------YGDIPRGIFIIRGENV 53
V+ D R G L D+ N++L K+IERI + +I G+ ++RG +
Sbjct: 8 VITTDARYFEGTLEGFDKSTNIILSKSIERIIYSKEDQENNNEENEEIESGVNVMRGNEI 67
Query: 54 VLMGEVDKEKEHCPQLQQV 72
V +GE+D + P QV
Sbjct: 68 VCIGEID--ESLSPNWAQV 84
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride
IMI 206040]
Length = 83
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L GR +IG LR D F N+VL + +E G + I G+ +IRG +VV++
Sbjct: 17 FVQLNGGRKVIGVLRGYDVFLNVVLDEAVEEKDGGEK---IRLGMVVIRGNSVVML 69
>gi|326437234|gb|EGD82804.1| N-alpha-acetyltransferase 38 [Salpingoeca sp. ATCC 50818]
Length = 117
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 5/46 (10%)
Query: 12 GYLRSVDQFANLVLHKTIERI---HVGNQYGDIPRGIFIIRGENVV 54
G LR DQ NL+L + ER+ H G + +P G++IIRG+NV+
Sbjct: 73 GTLRGFDQATNLILTDSSERVVSLHEGVEV--VPLGLYIIRGDNVL 116
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L+ GR + G LR D F NLV+ E + G + P G+ +IRG +V M +D ++
Sbjct: 14 LQGGRQISGVLRGYDMFLNLVVDSAFEELGGGQRK---PCGMVVIRGNSVSAMELLDNQR 70
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R + G LR DQF NLV+ T+E GN DI G+ +IRG ++V
Sbjct: 22 LNANRMVTGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSIV 68
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R + G LR D F N+VL + E + G + P G+ +IRG ++VL+
Sbjct: 21 LNGSRVVSGILRGFDPFMNIVLEEAFEEVKGGQR---TPIGMTVIRGNSIVLL 70
>gi|325188073|emb|CCA22616.1| U6 snRNAassociated Smlike protein putative [Albugo laibachii Nc14]
Length = 119
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGN---QYGDIPR--GIFIIRGENVVLM 56
V R GR + G L+ DQ NLVL + IE + N + D R G+ + RG V+L+
Sbjct: 42 VKFRGGRQVHGTLKGYDQLVNLVLDECIEFLREDNDSYRLSDKTRSIGLVVCRGTTVMLI 101
Query: 57 GEVDKEKEHC-PQLQQ 71
VD +E P +QQ
Sbjct: 102 SPVDGTEEIANPFIQQ 117
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L GR +IG LR D F N+VL + +E G + + G+ +IRG +VV++
Sbjct: 17 FVQLNGGRKVIGVLRGYDVFLNIVLDEAVEEKEGGEK---VRIGMVVIRGNSVVML 69
>gi|126654168|ref|XP_001388399.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117492|gb|EAZ51592.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 62
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V L R +IG LR D F NLVL T E + + G +IRG +V++ +D
Sbjct: 3 IVKLNGNRQIIGSLRGYDNFMNLVLENTTEVLDSTKK----SIGTTVIRGNSVIMWECID 58
Query: 61 KEK 63
K K
Sbjct: 59 KVK 61
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L RT+ G LR D F N+ L T+E + +Y G+ IIRG +++LM
Sbjct: 23 LNGNRTVHGILRGFDTFMNIALKDTVEVVSPTEKY---EIGMVIIRGNSILLM 72
>gi|412986570|emb|CCO14996.1| predicted protein [Bathycoccus prasinos]
Length = 72
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L R +IG LR DQF NLVL + + + P G+ ++RG +V+ M +
Sbjct: 9 LNGNRGVIGILRGFDQFLNLVLDECVND----STAEKTPLGMVVVRGASVLSM----EAL 60
Query: 64 EHCPQLQQVSV 74
EH +Q+ SV
Sbjct: 61 EHIAPVQRKSV 71
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L RT+ G LR D F N+ L T+E + +Y G+ +IRG +++LM
Sbjct: 21 VKLNGNRTVQGILRGFDTFMNIALKDTVEVVSPTEKY---EIGMVLIRGNSIILM 72
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E G++ DI G+ ++RG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDEKTDI--GMVVLRGNSVV 68
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R + G LR DQF NLV+ T+E GN DI G+ +IRG ++V
Sbjct: 9 LNANRMVTGTLRGFDQFMNLVVDNTVE--VNGNDKTDI--GMVVIRGNSIV 55
>gi|425765914|gb|EKV04555.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum PHI26]
gi|425779249|gb|EKV17325.1| U6 snRNA-associated Sm-like protein LSM4, putative [Penicillium
digitatum Pd1]
Length = 121
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D F NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFFRLPE--VYIRGNNI 66
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L+ GR + G LR D F NLV+ E + G + P G+ +IRG +V M +D ++
Sbjct: 9 LQGGRQVSGVLRGYDMFLNLVVDNAFEELGGGQRK---PCGMVVIRGNSVSAMELLDNQR 65
>gi|358365662|dbj|GAA82284.1| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus kawachii
IFO 4308]
Length = 121
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L S D + NL+L + ++ G+++ +P +RG N+
Sbjct: 16 LVELKNGETLNGHLASCDNWMNLILKEVVQTSPEGDRFFRLPE--VYVRGNNI 66
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R + G LR D F N+V+ + +E + G Q I G+ ++RG +V LM
Sbjct: 21 LNGDRKISGVLRGFDPFMNMVIDEAVEHLKTGEQ---IMIGMVVVRGNSVTLM 70
>gi|255946281|ref|XP_002563908.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588643|emb|CAP86759.1| Pc20g14300 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 121
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D F NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLVTCDNFMNLILREVVQTSPEGDRFFRLPE--VYIRGNNI 66
>gi|347837957|emb|CCD52529.1| hypothetical protein [Botryotinia fuckeliana]
Length = 122
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L+DG TL G+L S D + NL L + ++ G+++ +P ++G N+
Sbjct: 17 LVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPE--IYVKGNNI 67
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T++ G++ DI G+ +IRG +VV
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVD--VNGDEKTDI--GMVVIRGNSVV 68
>gi|19115063|ref|NP_594151.1| Sm snRNP core protein Smb1 [Schizosaccharomyces pombe 972h-]
gi|1723236|sp|Q10163.1|RSMB_SCHPO RecName: Full=Small nuclear ribonucleoprotein-associated protein
B; Short=snRNP-B; AltName: Full=Sm protein B;
Short=Sm-B; Short=SmB
gi|1177355|emb|CAA93231.1| Sm snRNP core protein Smb1 [Schizosaccharomyces pombe]
Length = 147
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 12/63 (19%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR----------GIFIIRGE 51
V +DGRT +G L + D F NLVL E H+ Q ++P G+ I+RGE
Sbjct: 16 VTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQ--NVPSNSVYEEKRMLGLVILRGE 73
Query: 52 NVV 54
+V
Sbjct: 74 FIV 76
>gi|60691036|gb|AAX30542.1| SJCHGC04779 protein [Schistosoma japonicum]
gi|226487226|emb|CAX75478.1| Small nuclear ribonucleoprotein F [Schistosoma japonicum]
gi|226487228|emb|CAX75479.1| Small nuclear ribonucleoprotein F [Schistosoma japonicum]
gi|226487230|emb|CAX75480.1| Small nuclear ribonucleoprotein F [Schistosoma japonicum]
gi|226487232|emb|CAX75481.1| Small nuclear ribonucleoprotein F [Schistosoma japonicum]
gi|226487234|emb|CAX75482.1| Small nuclear ribonucleoprotein F [Schistosoma japonicum]
Length = 84
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKT---IERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V L+ G GYL SVD++ NL LH T I+ H G+ G +IR NV+ +
Sbjct: 21 IVKLKWGMEYKGYLVSVDRYMNLQLHSTDEYIDNCHTGS------LGEVLIRCNNVLYIR 74
Query: 58 EVDKEK 63
E D ++
Sbjct: 75 ECDDDR 80
>gi|256052184|ref|XP_002569656.1| small nuclear ribonucleoprotein f (snrnp-f) [Schistosoma mansoni]
gi|353230903|emb|CCD77320.1| putative small nuclear ribonucleoprotein f (snrnp-f) [Schistosoma
mansoni]
Length = 84
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKT---IERIHVGNQYGDIPRGIFIIRGENVVLMG 57
+V L+ G GYL SVD++ NL LH T I+ H G+ G +IR NV+ +
Sbjct: 21 IVKLKWGMEYKGYLVSVDRYMNLQLHSTDEYIDNCHTGS------LGEVLIRCNNVLYIR 74
Query: 58 EVDKEK 63
E D ++
Sbjct: 75 ECDDDR 80
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ TIE + G Q I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVVDDTIE-MAPGGQMNTI--GMVVIRGNSIIML 70
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ TIE + G Q I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVVDDTIE-MAPGGQMNTI--GMVVIRGNSIIML 70
>gi|213406934|ref|XP_002174238.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
gi|212002285|gb|EEB07945.1| U6 snRNP-associated protein Lsm4 [Schizosaccharomyces japonicus
yFS275]
Length = 119
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G T G+L D + NL L + I+ + G+++ +P IRG N+
Sbjct: 16 LVELKNGETFNGHLEKCDNYMNLTLQEVIQTMPEGDKFFRMPE--CYIRGNNI 66
>gi|430811238|emb|CCJ31332.1| unnamed protein product [Pneumocystis jirovecii]
Length = 66
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHV--GNQYGDIPRGIFIIRGENV 53
M++ DGR L G+L DQ NL++ + E++ G Q + G +++RG+N+
Sbjct: 13 MIVTSDGRILTGHLTGFDQTTNLIISEVDEKLFSMEGTQVTKVD-GAYLVRGDNM 66
>gi|228997550|ref|ZP_04157163.1| Acetoacetyl-CoA synthase [Bacillus mycoides Rock3-17]
gi|228762178|gb|EEM11111.1| Acetoacetyl-CoA synthase [Bacillus mycoides Rock3-17]
Length = 646
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 46 FIIRGENVVLMGEVDKEKEHCPQLQQVSV 74
F RG+NV L EVDK EHCP +++V +
Sbjct: 196 FSRRGKNVSLKDEVDKACEHCPSVEKVVI 224
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
M L GR + G LR D F NLV+ +E G++ + G+ +IRG +++++ +D
Sbjct: 18 MTKLNGGRVVEGTLRGFDPFMNLVVDDGVEARKTGDR---VRIGVVVIRGSSIIMLEALD 74
Query: 61 K 61
+
Sbjct: 75 R 75
>gi|115383910|ref|XP_001208502.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
gi|114196194|gb|EAU37894.1| hypothetical protein ATEG_01137 [Aspergillus terreus NIH2624]
Length = 119
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFKLPE--VYIRGNNI 66
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus
corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus
corporis]
Length = 76
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F NLV+ +++E G + +I G+ +IRG +VV++ +D+
Sbjct: 21 LNGGRQVNGILRGFDPFMNLVIDESVEICKNG-THNNI--GMVVIRGNSVVMLEALDR 75
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G;
65009-64161 [Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
L R ++G LR DQF NLV+ T+E G+ DI G+ +IRG ++V
Sbjct: 22 LNANRMVVGTLRGFDQFMNLVVDNTVE--VNGDDKTDI--GMVVIRGNSIV 68
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ +T+E + G Q I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVVDETLE-MGPGGQQSSI--GMVVIRGNSIIML 70
>gi|352683089|ref|YP_004893613.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
gi|350275888|emb|CCC82535.1| putative snRNP Sm-like protein [Thermoproteus tenax Kra 1]
Length = 79
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+V LRDG + G L+S DQ NL+L E + N + RG ++RGENV+ +
Sbjct: 25 LVKLRDGYEIRGILKSFDQHVNLLLEDA-EEVVDNNIF---KRGTMVVRGENVLFV 76
>gi|17509627|ref|NP_493348.1| Protein SNR-2 [Caenorhabditis elegans]
gi|29427664|sp|P91918.1|RSMB_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein-associated
protein B; Short=snRNP-B; AltName: Full=Sm protein B;
Short=Sm-B; Short=SmB
gi|3880616|emb|CAB07132.1| Protein SNR-2 [Caenorhabditis elegans]
Length = 160
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVL-----HKTIERIHVGNQYGDIPR--GIFIIRGENVV 54
++L+DGRT IG+ ++ D+ N++L H+ I+ G+ R G+ ++RGE++V
Sbjct: 19 IILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTDGEEKRILGLVLVRGEHIV 78
Query: 55 LM 56
M
Sbjct: 79 SM 80
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKEHC 66
GR G L+ DQ NLV+ +E G + G+ ++RG N+VL+ D
Sbjct: 44 GREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSL--GLVVLRGPNIVLVSPTDGSSGKS 101
Query: 67 PQLQQVSVEDILNAQRKEQEVKQE 90
++ I N Q K ++Q
Sbjct: 102 ------FLKSIRNGQSKSVNMRQS 119
>gi|312385157|gb|EFR29724.1| hypothetical protein AND_23652 [Anopheles darlingi]
Length = 64
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L GR + G LR D F N+VL ++IE G + G+ +IRG +++L+ +D+
Sbjct: 9 LNGGRVVSGILRGFDPFMNVVLDESIEECKDGTRNN---IGMVVIRGNSIILVEALDR 63
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L+ GR + G LR D F NLVL +E ++ P G +IRG +V M
Sbjct: 18 FVHLQGGRKVSGVLRGYDLFLNLVLDDALEETTPAQKH---PIGTVVIRGNSVTSM 70
>gi|156034609|ref|XP_001585723.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980]
gi|154698643|gb|EDN98381.1| hypothetical protein SS1G_13239 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 122
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L+DG TL G+L S D + NL L + ++ G+++ +P ++G N+
Sbjct: 17 LVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPE--IYVKGNNI 67
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEKE 64
GR + G L+ DQ NLVL E++H G+ ++RG + L+ VD +E
Sbjct: 27 GREVTGVLKGFDQLLNLVLDDVEEQLHTEPLPSTRQLGLVVLRGPTLTLLSPVDGFEE 84
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G LR D F NLV+ + E I Q DI G+ ++RG +++L+ +D+
Sbjct: 21 LNGNRRVTGVLRGFDPFMNLVIDEATEDIST-TQKNDI--GMVVVRGNSIILLEALDR 75
>gi|118398961|ref|XP_001031807.1| Sm protein [Tetrahymena thermophila]
gi|89286141|gb|EAR84144.1| Sm protein [Tetrahymena thermophila SB210]
Length = 159
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-------GIFIIRGENVV 54
V ++DGR L+G + D+ NLVL +T E + + P G+ IIRGEN+V
Sbjct: 17 VTIQDGRMLVGTFLAFDKHLNLVLSETEEFRPIKPKTKGEPERQTKRILGLVIIRGENIV 76
>gi|156553214|ref|XP_001600459.1| PREDICTED: tuftelin-interacting protein 11-like [Nasonia
vitripennis]
Length = 822
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 51 ENVVLMGEVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLSFVP 108
E V + +++ + PQ+ Q +E + A R E+ Q ++ K+ +ERG+ F+P
Sbjct: 715 EQVSYLMTLERSQPQMPQISQPRIERLAEAVRIASEIPQGFKDLVQKKCEERGILFMP 772
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 76
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ + +E + G Q +I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVE-MAAGGQQNNI--GMVVIRGNSIIML 70
>gi|429327489|gb|AFZ79249.1| small nuclear ribonucleoprotein-associated protein B, putative
[Babesia equi]
Length = 153
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIE-RIHVGNQYGDIPR--GIFIIRGENVV 54
V ++DGR +G L + D+ NLVL E R+ G + +I R G ++RGEN+V
Sbjct: 18 VTVKDGRKFVGTLIAFDKHMNLVLADCEEFRMTKGKEGKEIKRTLGFILLRGENIV 73
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R + G LR DQF NLVL T+E + + ++ G+ +IRG +V+L+
Sbjct: 21 LNANRRVSGILRGFDQFMNLVLEDTVEEVS-STEKNEL--GMVVIRGNSVILI 70
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+ GR + G LR D F NLVL ++ E GNQ G+ +IRG +++++
Sbjct: 21 INGGRQVQGILRGFDPFMNLVLDESTEISGSGNQNS---IGMVVIRGNSIIML 70
>gi|109458413|ref|XP_001063547.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392337649|ref|XP_003753311.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ + +E + G Q G+ +IRG ++V++
Sbjct: 21 LDGGRRVRGVLRGFDPFMNLVVDECVEMGNSGQQNNS---GVVVIRGNSIVML 70
>gi|341902435|gb|EGT58370.1| hypothetical protein CAEBREN_14673 [Caenorhabditis brenneri]
Length = 159
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVL-----HKTIERIHVGNQYGDIPR--GIFIIRGENVV 54
++L+DGRT +G+ ++ D+ N++L H+ I+ G+ R G+ ++RGE++V
Sbjct: 19 IILQDGRTFVGFFKAFDKHMNILLAECEEHRQIKPKAGKKADGEEKRILGLVLLRGEHIV 78
Query: 55 LM 56
M
Sbjct: 79 SM 80
>gi|294882102|ref|XP_002769608.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239873160|gb|EER02326.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 83
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR-GIFIIRGENVVLMGEVD 60
V L DGR + G L +D N+VL +E+ +Y + + GI +I G+ V +G +
Sbjct: 19 VTLTDGRDITGRLYCIDNKENIVLRNAVEKRRRDGEYSSVRKIGIVMIPGKEAVKIGCLK 78
Query: 61 KE 62
K+
Sbjct: 79 KD 80
>gi|121715750|ref|XP_001275484.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
gi|119403641|gb|EAW14058.1| small nuclear ribonucleoprotein [Aspergillus clavatus NRRL 1]
Length = 119
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQASPEGDRFFRLPE--VYIRGNNI 66
>gi|403372169|gb|EJY85976.1| Small nuclear ribonucleoprotein G, putative [Oxytricha trifallax]
Length = 709
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
L R + G L+ DQF N+VL IE I N+ G +IRG +VV+ +DK
Sbjct: 23 LNANRHVAGVLKGYDQFLNIVLDNAIEII---NKDEKRELGTIVIRGNSVVMWENLDK 77
>gi|67540086|ref|XP_663817.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
gi|40738809|gb|EAA57999.1| hypothetical protein AN6213.2 [Aspergillus nidulans FGSC A4]
Length = 775
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P +RG N+
Sbjct: 26 LVELKNGETLNGHLANCDNWMNLILREVVQTSPEGDRFFKLPE--VYVRGNNI 76
>gi|440907817|gb|ELR57914.1| hypothetical protein M91_09610 [Bos grunniens mutus]
Length = 247
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDK 61
V L GR + G LR D F NLV+ + +E G Q +I G+ +IRG +++++ +++
Sbjct: 190 VKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQ-NNI--GMVVIRGNSIIMLEALER 246
>gi|159129598|gb|EDP54712.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
fumigatus A1163]
Length = 105
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P +RG N+
Sbjct: 2 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYVRGNNI 52
>gi|357479653|ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago truncatula]
Length = 88
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
+V L+ G GYL SVD + NL L T E I GN G++ G +IR NV+ M V
Sbjct: 21 IVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIE-GNFTGNL--GEILIRCNNVLYMRGVP 77
Query: 61 KEKE 64
+++E
Sbjct: 78 EDEE 81
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R + G LR D F N+V+ + +E GN I G+ +IRG +VV+M
Sbjct: 21 LNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGNS---INLGMTVIRGNSVVIM 70
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR D F N+VL E GN+ G+ +IRG +VV++
Sbjct: 17 FVQLNGSRKVIGVLRGYDVFLNIVLDDAFEETEGGNK---TRLGMVVIRGNSVVML 69
>gi|112253333|gb|ABI14254.1| small nuclear ribonucleoprotein polypeptide G [Pfiesteria
piscicida]
Length = 78
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVDKEK 63
L R ++G LR DQF N+VL T+E I + +I G+ +IRG ++++ +D+ K
Sbjct: 22 LTANRHVVGVLRGYDQFMNIVLDNTVE-IASPTEKNEI--GMVVIRGNSIMMWECLDRVK 78
>gi|332031555|gb|EGI71027.1| Small nuclear ribonucleoprotein F [Acromyrmex echinatior]
Length = 88
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
MV L+ G GYL SVD + NL L T E I GN G++ G +IR NV+ + V+
Sbjct: 22 MVKLKWGHEYKGYLVSVDGYMNLQLANTEEHIE-GNCTGNL--GEVLIRCNNVMYIRGVE 78
Query: 61 KEKE 64
+ E
Sbjct: 79 ESDE 82
>gi|291386619|ref|XP_002709854.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ + +E + G Q G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVEMANSGQQNN---IGMVVIRGNSIIML 70
>gi|170053718|ref|XP_001862805.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874114|gb|EDS37497.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 3017
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 58 EVDKEKEHCPQLQQVSVEDILNAQRKEQEVKQERSRMLAKRLKERGLS 105
E+ K KE Q +++ + L QRKE+E+K +++ M AKR +E L+
Sbjct: 1010 EISKNKEKARQAKEIERNERLEQQRKERELKNQQA-MEAKRKREEELA 1056
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIE--RIHVGNQYGDIPRGIFIIRGENVVLMGEV 59
V GR ++G L+ DQ NLVL E R GN+ P G+ + RG +VL+ +
Sbjct: 64 VKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDEGNETTR-PLGLVVARGTLLVLISPL 122
Query: 60 DKEKEHCPQLQQVSVE 75
D +E QQ + E
Sbjct: 123 DGSEEIENPFQQPAEE 138
>gi|268561770|ref|XP_002646524.1| C. briggsae CBR-SNR-2 protein [Caenorhabditis briggsae]
Length = 160
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVL-----HKTIERIHVGNQYGDIPR--GIFIIRGENVV 54
++L+DGRT +G+ ++ D+ N++L H+ I+ G+ R G+ ++RGE++V
Sbjct: 19 IILQDGRTFVGFFKAFDKHMNILLAECEEHRQIKPKAGKKADGEEKRILGLVLLRGEHIV 78
Query: 55 LM 56
M
Sbjct: 79 SM 80
>gi|146418329|ref|XP_001485130.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
gi|146390603|gb|EDK38761.1| hypothetical protein PGUG_02859 [Meyerozyma guilliermondii ATCC
6260]
Length = 97
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI---HVGNQYGDIPRGIFIIRGENVVLMGE 58
V+ D R G L D N++L E I + IP G++ +RG NVV +GE
Sbjct: 17 VITTDARLFEGILEGFDNSTNIILSSCYEHIIYEEEDEENQAIPLGVYFMRGGNVVCIGE 76
Query: 59 VDKE 62
+
Sbjct: 77 TSGD 80
>gi|327311460|ref|YP_004338357.1| Small nuclear ribonucleoprotein (snRNP) --like protein
[Thermoproteus uzoniensis 768-20]
gi|326947939|gb|AEA13045.1| Small nuclear ribonucleoprotein (snRNP) - like protein
[Thermoproteus uzoniensis 768-20]
Length = 75
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
+V LRDG + G L+S DQ NL+L E I N + RG ++RGENV+ +
Sbjct: 21 LVKLRDGYEIRGILKSFDQHVNLLLEDAEEVID--NVI--LKRGTMVVRGENVLFV 72
>gi|291398958|ref|XP_002715163.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ + +E + G Q G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFINLVIDECVEMANSGQQNN---IGMVVIRGNSIIML 70
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus
harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR D F NLV+ + +E + G Q +I G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGFDPFMNLVIDECVE-MAPGGQQNNI--GMVVIRGNSIIML 70
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L R++ G LR D F N+V+ +E + G++ +I G+ +IRG ++V+M
Sbjct: 21 LNGNRSVSGILRGFDPFMNIVVEDAVENLKSGDK-NEI--GMVVIRGNSIVIM 70
>gi|317147119|ref|XP_001821897.2| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 123
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P IRG N+
Sbjct: 18 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYIRGNNI 68
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 7 GRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVD 60
GR G L+ DQ NLV+ +E G + G+ ++RG N+VL+ D
Sbjct: 44 GREATGILKGYDQLMNLVMDDVVEEYEDGRPTRSL--GLVVLRGPNIVLVSPTD 95
>gi|238496529|ref|XP_002379500.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|220694380|gb|EED50724.1| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
flavus NRRL3357]
gi|391868822|gb|EIT78031.1| small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 121
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYIRGNNI 66
>gi|119481265|ref|XP_001260661.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|146322938|ref|XP_755534.2| U6 snRNA-associated Sm-like protein LSM4 [Aspergillus fumigatus
Af293]
gi|119408815|gb|EAW18764.1| small nuclear ribonucleoprotein [Neosartorya fischeri NRRL 181]
gi|129558535|gb|EAL93496.2| U6 snRNA-associated Sm-like protein LSM4, putative [Aspergillus
fumigatus Af293]
Length = 119
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P +RG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYVRGNNI 66
>gi|350634474|gb|EHA22836.1| hypothetical protein ASPNIDRAFT_127789 [Aspergillus niger ATCC
1015]
Length = 118
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P +RG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYVRGNNI 66
>gi|426238536|ref|XP_004013207.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 4 LRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
L GR + G LR +D F NLV+ + +E G Q G+ +IRG +++++
Sbjct: 21 LNGGRHVQGILRGLDPFMNLVIDECVEMATSGQQNNI---GMVVIRGNSIIML 70
>gi|317147121|ref|XP_003189888.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus oryzae
RIB40]
Length = 121
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P IRG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYIRGNNI 66
>gi|145232181|ref|XP_001399544.1| U6 snRNA-associated Sm-like protein LSm4 [Aspergillus niger CBS
513.88]
gi|134056455|emb|CAL00622.1| unnamed protein product [Aspergillus niger]
Length = 121
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L++G TL G+L + D + NL+L + ++ G+++ +P +RG N+
Sbjct: 16 LVELKNGETLNGHLANCDNWMNLILKEVVQTSPEGDRFFRLPE--VYVRGNNI 66
>gi|257076617|ref|ZP_05570978.1| snRNP Sm-like protein [Ferroplasma acidarmanus fer1]
Length = 71
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVV 54
+LL+D R+L+G L D++ N+ L E V + G + IIRG NVV
Sbjct: 19 LLLKDNRSLVGTLVGYDEYMNMTLDDAEENGEVQRKIGKV-----IIRGSNVV 66
>gi|444315628|ref|XP_004178471.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
gi|387511511|emb|CCH58952.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS 6284]
Length = 142
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPR------GIFIIRGENVVL 55
V L GR +IG L+ DQ NLVL +TIE I I + G+ +IRG ++
Sbjct: 67 VKLMGGRLVIGILKGYDQLMNLVLDETIEYIRDPTDPYVIQKDKTRNLGLAVIRGNVLLT 126
Query: 56 MGEVD 60
+ VD
Sbjct: 127 LSPVD 131
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis
ATCC 18188]
Length = 78
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR D F N+VL + +E + G + + G+ +IRG +VV++
Sbjct: 18 VQLNGNRKVIGILRGYDVFMNIVLDEAVEEKNGGEK---VRLGMVVIRGNSVVML 69
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR D F N+VL + +E G + I G+ +IRG +VV++
Sbjct: 17 FVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKDGGEK---IRLGMVVIRGNSVVML 69
>gi|71006012|ref|XP_757672.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
gi|46097347|gb|EAK82580.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
Length = 134
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIH--VGNQ--YGDIPR-GIFIIRGENVV 54
V ++ GR + G LR D F NLV+ + IE++H GN + D R G ++RG +V
Sbjct: 66 VNIQGGRKIQGTLRGFDMFLNLVVDEAIEQVHPEAGNPNVWQDGDRCGTVVVRGNSVT 123
>gi|154311062|ref|XP_001554861.1| hypothetical protein BC1G_06649 [Botryotinia fuckeliana B05.10]
Length = 690
Score = 34.3 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 53
+V L+DG TL G+L S D + NL L + ++ G+++ +P ++G N+
Sbjct: 17 LVELKDGETLNGHLVSCDTWMNLTLKEVVQTSPDGDKFTRLPE--IYVKGNNI 67
>gi|307107960|gb|EFN56201.1| hypothetical protein CHLNCDRAFT_22477 [Chlorella variabilis]
Length = 101
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERI-------HVGNQYGDIPRGIFIIRGENVV 54
V L GR ++G L+ DQ NLVL + +E + V +Q P G+ + RG +V+
Sbjct: 22 VKLAGGREVVGVLKGYDQLLNLVLDEAVEYLRDPEDPMRVTDQTR--PMGLIVCRGTSVM 79
Query: 55 LMGEVDKEKEHCPQLQQVSVE 75
L+ +E QQ +E
Sbjct: 80 LVVPTAGTEEIANPFQQEEME 100
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma
FGSC 2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 2 VLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLM 56
V L R +IG LR D F N+VL +E G + + G+ IRG +VV+M
Sbjct: 18 VQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKDGGEK---VKLGMVTIRGNSVVMM 69
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.142 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,686,238,674
Number of Sequences: 23463169
Number of extensions: 63711431
Number of successful extensions: 240458
Number of sequences better than 100.0: 947
Number of HSP's better than 100.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 500
Number of HSP's that attempted gapping in prelim test: 239578
Number of HSP's gapped (non-prelim): 960
length of query: 116
length of database: 8,064,228,071
effective HSP length: 83
effective length of query: 33
effective length of database: 6,116,785,044
effective search space: 201853906452
effective search space used: 201853906452
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 69 (31.2 bits)