BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10178
(655 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila melanogaster GN=osa PE=1
SV=1
Length = 2716
Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust.
Identities = 259/359 (72%), Positives = 297/359 (82%), Gaps = 12/359 (3%)
Query: 174 VPKIIDPAGNAK-------RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILR 226
P I DP AK RRR S +EDE Y RDEASL+ VS+SQD++ARRCIALSNI R
Sbjct: 2145 TPAIFDPRTTAKDEARVLQRRRDSSFEDECYTRDEASLHLVSESQDSLARRCIALSNIFR 2204
Query: 227 NLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDD-DWTDCCSSLSPQ 285
NLTFVPGNE +K++ FL +LGRL+L HEH R KTRNYD+++D D++D CSSL Q
Sbjct: 2205 NLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSL--Q 2262
Query: 286 AESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPF 345
E EWWWDY+ IREN+LV++ANI+GH++L +Y E I+RP++DGLLHWAVCP+A GQDPF
Sbjct: 2263 GEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPF 2322
Query: 346 PSSSCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVL 403
PS N LSPQRLALEALCKLCVTD NVDLVIATPP++RLE+L VLTR LC+NEDQVL
Sbjct: 2323 PSCGPNSVLSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVL 2382
Query: 404 REFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPD 463
REF VNLLHYLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI LR+NPD
Sbjct: 2383 REFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPD 2442
Query: 464 SMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
SMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 2443 SMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 2501
Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 2428 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 2487
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 2488 DQQVALIISRVLYQ 2501
>sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein 1B OS=Homo sapiens
GN=ARID1B PE=1 SV=2
Length = 2236
Score = 295 bits (754), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 215/339 (63%), Gaps = 10/339 (2%)
Query: 187 RRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLR 246
R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK+ +
Sbjct: 1901 RNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVL 1960
Query: 247 LLGRLILAYHEHGLRATKTRNYDKDDD-DWTDCCSSLSPQAESEWWWDYMENIRENVLVS 305
+LG+LIL +HEH R + Y+K++D D CS + EWWWD +E +R+N LV+
Sbjct: 1961 ILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS------KDEWWWDCLEVLRDNTLVT 2014
Query: 306 LANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALC 363
LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL LE LC
Sbjct: 2015 LANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLC 2074
Query: 364 KLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSR 423
KL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D+ +R
Sbjct: 2075 KLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAAR 2134
Query: 424 TIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLS 483
IA+Q I L++F+E A +QH + ++ P S+DM+ R A+ LL ++
Sbjct: 2135 AIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEP-PSVDMMCRAAKALLAMA 2193
Query: 484 RHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 2194 RVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 2232
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 592 SLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 646
S+DM+ R A+ LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 2178 SVDMMCRAAKALLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 2232
>sp|A2BH40|ARI1A_MOUSE AT-rich interactive domain-containing protein 1A OS=Mus musculus
GN=Arid1a PE=1 SV=1
Length = 2283
Score = 262 bits (670), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/367 (43%), Positives = 221/367 (60%), Gaps = 12/367 (3%)
Query: 158 TDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARR 217
TD+ K E P I PA R + EDE + +DE L + D QD++A+R
Sbjct: 1921 TDEGAKSAEATKESSKFPFGISPA--QSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKR 1978
Query: 218 CIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDD-DWT 276
C+ +SN +R+L+FVPGN+ E SK+ L +LG+LIL +H+H R Y+K+++ D
Sbjct: 1979 CVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQG 2038
Query: 277 DCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVC 336
C + EWWWD +E +REN LV+LANISG +DL YPE I P+LDGLLHWAVC
Sbjct: 2039 VSCDKV------EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVC 2092
Query: 337 PAAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRF 394
P+A+ QDPF + N LSPQRL LE L KL + DNNVDL++ATPP++RLE+L + RF
Sbjct: 2093 PSAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRF 2152
Query: 395 LCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHG 454
L ++ V RE V LL LA DS +R IA+Q I L+ F+E + +Q
Sbjct: 2153 LSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAS 2212
Query: 455 IGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAA 514
+ ++ NP TS+DM+RR AR LL L++ +N F E RLL + +S +++ V+
Sbjct: 2213 LLHMQ-NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQ 2271
Query: 515 IISRVLY 521
+I VL+
Sbjct: 2272 VICDVLF 2278
>sp|O14497|ARI1A_HUMAN AT-rich interactive domain-containing protein 1A OS=Homo sapiens
GN=ARID1A PE=1 SV=3
Length = 2285
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 223/366 (60%), Gaps = 13/366 (3%)
Query: 159 DKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRC 218
D A+ K KF P I PA R + EDE + +DE L + D QD++A+RC
Sbjct: 1925 DGAKSSEAIKESSKF-PFGISPA--QSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRC 1981
Query: 219 IALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDD-DWTD 277
+ +SN +R+L+FVPGN+ E SK+ L +LG+LIL +H+H R Y+K+++ D
Sbjct: 1982 VCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGV 2041
Query: 278 CCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCP 337
C+ + EWWWD +E +REN LV+LANISG +DL YPE I P+LDGLLHWAVCP
Sbjct: 2042 SCNKV------EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCP 2095
Query: 338 AAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFL 395
+A+ QDPF + N LSPQRL LE L KL + DNNVDL++ATPP++RLE+L + RFL
Sbjct: 2096 SAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFL 2155
Query: 396 CKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGI 455
++ V RE V LL LA DS +R IA+Q I L+ F+E + +Q +
Sbjct: 2156 SDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASL 2215
Query: 456 GALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAI 515
++ NP TS+DM+RR AR LL L++ +N F E RLL + +S +++ V+ +
Sbjct: 2216 LHMQ-NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQV 2274
Query: 516 ISRVLY 521
I VL+
Sbjct: 2275 ICDVLF 2280
>sp|Q9NGB4|OSA_DROYA Trithorax group protein osa (Fragment) OS=Drosophila yakuba GN=osa
PE=3 SV=1
Length = 324
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 100/110 (90%)
Query: 413 YLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDML 472
YLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI LR+NPDSMGTSLDML
Sbjct: 1 YLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDML 60
Query: 473 RRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
RR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 61 RRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 110
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 37 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 96
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 97 DQQVALIISRVLYQ 110
>sp|Q9N6K2|OSA_DROSI Trithorax group protein osa (Fragment) OS=Drosophila simulans
GN=osa PE=3 SV=2
Length = 324
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/110 (84%), Positives = 100/110 (90%)
Query: 413 YLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDML 472
YLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI LR+NPDSMGTSLDML
Sbjct: 1 YLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDML 60
Query: 473 RRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
RR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 61 RRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 110
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 37 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 96
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 97 DQQVALIISRVLYQ 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,405,999
Number of Sequences: 539616
Number of extensions: 11873743
Number of successful extensions: 53385
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 925
Number of HSP's that attempted gapping in prelim test: 43506
Number of HSP's gapped (non-prelim): 7530
length of query: 655
length of database: 191,569,459
effective HSP length: 124
effective length of query: 531
effective length of database: 124,657,075
effective search space: 66192906825
effective search space used: 66192906825
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)