Query psy10178
Match_columns 655
No_of_seqs 89 out of 107
Neff 3.5
Searched_HMMs 29240
Date Fri Aug 16 19:47:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10178.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10178hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z6h_A Catenin beta-1, beta-ca 97.5 0.001 3.5E-08 71.6 14.6 317 224-617 37-391 (644)
2 3nmz_A APC variant protein; pr 97.5 0.00017 5.8E-09 77.3 8.4 305 297-648 97-449 (458)
3 3nmw_A APC variant protein; AR 97.4 0.00014 4.7E-09 75.1 6.3 249 354-648 48-333 (354)
4 1jdh_A Beta-catenin; beta-cate 97.4 0.00068 2.3E-08 69.1 11.0 248 353-649 32-295 (529)
5 2z6h_A Catenin beta-1, beta-ca 97.2 0.0026 8.8E-08 68.6 12.8 214 353-612 29-257 (644)
6 3ul1_B Importin subunit alpha- 97.1 0.0085 2.9E-07 63.2 16.0 220 355-617 118-354 (510)
7 3l6x_A Catenin delta-1; cateni 97.0 0.0028 9.6E-08 70.2 11.4 137 354-525 64-221 (584)
8 2z6g_A B-catenin; FULL-length, 97.0 0.0058 2E-07 68.4 13.8 284 297-618 208-528 (780)
9 4hxt_A De novo protein OR329; 97.0 0.002 6.7E-08 58.8 8.1 214 354-615 18-248 (252)
10 1jdh_A Beta-catenin; beta-cate 96.9 0.0046 1.6E-07 63.0 11.3 221 385-649 16-256 (529)
11 2z6g_A B-catenin; FULL-length, 96.9 0.002 6.9E-08 72.1 9.3 189 354-618 166-358 (780)
12 1xm9_A Plakophilin 1; armadill 96.8 0.014 4.7E-07 61.0 13.9 138 353-525 17-172 (457)
13 3tpo_A Importin subunit alpha- 96.7 0.014 5E-07 61.5 13.0 220 355-617 137-373 (529)
14 1xm9_A Plakophilin 1; armadill 96.6 0.018 6E-07 60.2 12.7 133 353-505 59-196 (457)
15 3l6x_A Catenin delta-1; cateni 96.6 0.019 6.6E-07 63.7 13.6 173 220-492 211-392 (584)
16 3nmw_A APC variant protein; AR 96.5 0.017 5.6E-07 59.7 11.9 218 353-612 99-338 (354)
17 4hxt_A De novo protein OR329; 96.5 0.028 9.7E-07 51.1 12.0 190 388-649 4-199 (252)
18 4db8_A Armadillo-repeat protei 96.4 0.0068 2.3E-07 56.1 7.7 161 353-559 27-192 (252)
19 4db6_A Armadillo repeat protei 96.4 0.0043 1.5E-07 55.9 6.2 150 323-524 13-166 (210)
20 3now_A UNC-45 protein, SD10334 96.4 0.023 8E-07 65.3 13.0 190 209-486 259-452 (810)
21 4b8j_A Importin subunit alpha- 96.3 0.07 2.4E-06 55.3 15.3 229 354-610 90-360 (528)
22 2jdq_A Importin alpha-1 subuni 96.2 0.062 2.1E-06 53.4 13.8 247 353-647 80-345 (450)
23 4db6_A Armadillo repeat protei 96.2 0.014 4.9E-07 52.5 8.3 193 383-648 9-208 (210)
24 4b8j_A Importin subunit alpha- 96.0 0.024 8.1E-07 58.8 10.0 139 297-485 259-401 (528)
25 3nmz_A APC variant protein; pr 95.8 0.028 9.7E-07 60.3 10.0 215 353-609 215-451 (458)
26 4db8_A Armadillo-repeat protei 95.5 0.018 6.1E-07 53.2 6.1 136 353-524 69-208 (252)
27 1xqr_A HSPBP1 protein; armadil 95.2 0.062 2.1E-06 54.2 9.4 158 355-557 57-219 (296)
28 1wa5_B Importin alpha subunit; 94.9 0.63 2.1E-05 48.5 16.1 225 354-609 103-371 (530)
29 3ul1_B Importin subunit alpha- 94.5 0.59 2E-05 49.3 14.7 100 353-485 72-173 (510)
30 1wa5_B Importin alpha subunit; 93.6 0.6 2.1E-05 48.6 12.5 141 297-486 188-330 (530)
31 3tt9_A Plakophilin-2; cell adh 93.5 0.14 4.7E-06 50.6 7.1 107 355-494 27-134 (233)
32 2jdq_A Importin alpha-1 subuni 92.9 0.29 1E-05 48.6 8.6 140 297-484 165-305 (450)
33 3opb_A SWI5-dependent HO expre 92.8 0.53 1.8E-05 54.3 11.6 178 299-518 576-771 (778)
34 3tt9_A Plakophilin-2; cell adh 92.3 0.19 6.4E-06 49.6 6.2 155 353-527 67-231 (233)
35 3tpo_A Importin subunit alpha- 91.7 0.38 1.3E-05 50.7 8.2 105 355-492 93-200 (529)
36 3opb_A SWI5-dependent HO expre 91.6 4.3 0.00015 47.0 17.1 77 355-441 311-387 (778)
37 3now_A UNC-45 protein, SD10334 87.8 0.67 2.3E-05 53.4 6.7 101 353-485 638-738 (810)
38 1xqr_A HSPBP1 protein; armadil 87.3 1.3 4.6E-05 44.5 7.8 189 287-526 26-239 (296)
39 2j1d_G DAAM1, disheveled-assoc 81.5 0.49 1.7E-05 51.1 1.7 50 72-125 5-59 (483)
40 3grl_A General vesicular trans 71.9 5.3 0.00018 45.4 6.6 164 297-503 37-214 (651)
41 4gmo_A Putative uncharacterize 65.0 7.3 0.00025 43.1 5.8 161 353-527 49-216 (684)
42 1nxk_A MAP kinase-activated pr 63.2 1.7 6E-05 44.3 0.5 7 261-267 185-191 (400)
43 1nxk_A MAP kinase-activated pr 60.5 1.9 6.4E-05 44.0 0.2 8 482-489 306-313 (400)
44 4gmo_A Putative uncharacterize 60.5 12 0.00042 41.4 6.5 58 405-485 158-215 (684)
45 2vgl_B AP-2 complex subunit be 54.5 21 0.00071 38.4 6.9 69 353-441 333-401 (591)
46 4fdd_A Transportin-1; heat rep 53.5 2E+02 0.0068 31.8 14.6 312 296-651 270-664 (852)
47 4eah_A Formin-like protein 3, 52.3 2.9 9.9E-05 44.3 -0.1 45 75-123 12-61 (402)
48 2vgl_B AP-2 complex subunit be 48.5 1E+02 0.0035 33.1 11.1 93 296-419 100-192 (591)
49 2vgl_A Adaptor protein complex 46.1 12 0.00042 41.0 3.6 70 353-442 384-453 (621)
50 1w63_A Adapter-related protein 44.6 27 0.00091 38.0 5.9 70 353-442 365-434 (618)
51 3obv_E Protein diaphanous homo 44.5 11 0.00039 40.5 3.0 48 74-125 2-55 (457)
52 1ux5_A BNI1 protein; structura 38.4 6.5 0.00022 41.3 -0.1 44 74-123 1-53 (411)
53 2h8h_A Proto-oncogene tyrosine 34.8 13 0.00046 39.4 1.6 23 603-625 498-520 (535)
54 2vgl_A Adaptor protein complex 30.8 5.2E+02 0.018 28.2 13.3 31 355-395 258-288 (621)
55 3nwa_A GB, GB-1, GB1, envelope 28.8 12 0.00041 42.9 0.0 16 481-497 500-515 (703)
56 2h8h_A Proto-oncogene tyrosine 26.1 14 0.00048 39.3 0.0 13 480-492 499-511 (535)
57 3dad_A FH1/FH2 domain-containi 23.9 2.9E+02 0.0099 29.2 9.3 92 352-449 88-179 (339)
58 2qk2_A LP04448P; mini spindles 22.5 1.9E+02 0.0067 26.6 7.1 55 355-417 74-128 (242)
59 2fv2_A RCD1 required for cell 22.5 2E+02 0.007 29.5 7.6 93 385-494 3-95 (268)
No 1
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=97.52 E-value=0.001 Score=71.64 Aligned_cols=317 Identities=16% Similarity=0.142 Sum_probs=178.4
Q ss_pred hhhccccccCchhhhhcCcchHHHHHHHHHhhhccccccccCCCCCCCCCccccccCCCCccchhhhHHHHHHHhhhhhH
Q psy10178 224 ILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRENVL 303 (655)
Q Consensus 224 IlR~LSFvPgNe~emakh~~lL~iLgrlLlLhheH~~r~~~~~~y~~ed~d~~~~~~~~~~~~~~~Wwwd~l~~LReNaL 303 (655)
+|.+|+.-..|...+..+.+.+..|-++|.-. ++ ...|.+|.
T Consensus 37 ~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~---------------~~-----------------------~~~~~~A~ 78 (644)
T 2z6h_A 37 MVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT---------------ND-----------------------VETARCTA 78 (644)
T ss_dssp HHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSC---------------CC-----------------------HHHHHHHH
T ss_pred HHHHHHCCChhHHHHHhccChHHHHHHHHhcC---------------CC-----------------------HHHHHHHH
Confidence 33444444456667778888888888888211 01 24677888
Q ss_pred HhhhhccccccccC--CCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCcceeecCCCh
Q psy10178 304 VSLANISGHIDLDQ--YPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVIATPPY 381 (655)
Q Consensus 304 VtLaNiagqLDLs~--ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdliLsTpPf 381 (655)
-.|.|++..-+... +... ..|.|-.+|.. .|+ .=|..|+.+|++++....+.-..+
T Consensus 79 ~~L~~Ls~~~~~~~~i~~~g-~i~~Lv~lL~~--------~~~--------~v~~~A~~aL~nL~~~~~~~~~~v----- 136 (644)
T 2z6h_A 79 GTLHNLSHHREGLLAIFKSG-GIPALVKMLGS--------PVD--------SVLFYAITTLHNLLLHQEGAKMAV----- 136 (644)
T ss_dssp HHHHHHTTSHHHHHHHHTTT-HHHHHHHHTTC--------SSH--------HHHHHHHHHHHHHHHHSTTHHHHH-----
T ss_pred HHHHHHhcChhhHHHHHHcC-CHHHHHHHHhC--------CCH--------HHHHHHHHHHHHHHhCcchhHHHH-----
Confidence 88888876432110 0011 11223233332 121 457899999999998754332222
Q ss_pred hhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHH-----HHHHH---------
Q psy10178 382 ARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQA-----EQNAL--------- 447 (655)
Q Consensus 382 sRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~-----~~na~--------- 447 (655)
+-...+..|+++|... +...+..+..+|.+++.++......+. +.++|..|+.+|+.. ..++.
T Consensus 137 -~~~g~i~~Lv~lL~~~-~~~~~~~a~~~L~~La~~~~~~~~~i~-~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~~ 213 (644)
T 2z6h_A 137 -RLAGGLQKMVALLNKT-NVKFLAITTDCLQILAYGNQESKLIIL-ASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC 213 (644)
T ss_dssp -HHTTHHHHHHHGGGCC-CHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTC
T ss_pred -HHCCChHHHHHHHCcC-CHHHHHHHHHHHHHHHhcCcHHHHHHH-HcCChHHHHHHHHcCChHHHHHHHHHHHHHHhcC
Confidence 2356788899998655 445677788899999987766444443 346799999988632 11111
Q ss_pred -----hhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHHHHhhHh
Q psy10178 448 -----GVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522 (655)
Q Consensus 448 -----~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RLL~L~mS~ilDs~V~~ilA~vLfe 522 (655)
.+.+..++..|- .-+...+..+.+.|+.+|..|++...........-..|..+..+ -|..|....+.+|..
T Consensus 214 ~~~~~~l~~~g~l~~L~--~ll~~~~~~~~~~a~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~--~d~~v~~~a~~aL~~ 289 (644)
T 2z6h_A 214 SSNKPAIVEAGGMQALG--LHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGS--DDINVVTCAAGILSN 289 (644)
T ss_dssp TTHHHHHHHTTHHHHHH--TTTTCSCHHHHHHHHHHHHHHGGGCTTCCSCHHHHHHHHHHTTC--SCHHHHHHHHHHHHH
T ss_pred cccHHHHHHCCCHHHHH--HHHhcCCHHHHHHHHHHHHHHhhcchhhhhhhhHHHHHHHHHcC--CCHHHHHHHHHHHHH
Confidence 111112222221 00111246889999999999998765543333333445555443 366777778888887
Q ss_pred hccccccchhhhhHHHHhhHhccCccccccccccccCCC--Ccc--------------chHHHHHH-HHhhhhhcccccC
Q psy10178 523 TRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPD--SMG--------------TSLDMLRR-VANQHGIGALRDN 585 (655)
Q Consensus 523 ls~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~--~~~--------------~~~~~~~~-~~~~hg~~al~~~ 585 (655)
++.+-..+ +..+++.|-|- .|+..|.+.++ ..- ..-..+|. +.+.+|+..|.+-
T Consensus 290 L~~~~~~~-------~~~v~~~g~v~--~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~~l~~L~~l 360 (644)
T 2z6h_A 290 LTCNNYKN-------KMMVCQVGGIE--ALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKL 360 (644)
T ss_dssp HHTTCHHH-------HHHHHHTTHHH--HHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTHHHHHHHT
T ss_pred HHcCCHHH-------HHHHHHcCCHH--HHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHccChHHHHHH
Confidence 76531111 12234444333 56666654221 000 00012233 4444555544321
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcCCCCchhhH
Q psy10178 586 PDSMGTSLDMLRRTARTLLHLSRHPDNKPLFL 617 (655)
Q Consensus 586 p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~ 617 (655)
=. -+.+.++...|+.+|-.|+..++++..++
T Consensus 361 L~-~~~~~~v~~~a~~~L~nLa~~~~~~~~i~ 391 (644)
T 2z6h_A 361 LH-PPSHWPLIKATVGLIRNLALCPANHAPLR 391 (644)
T ss_dssp TS-TTCCHHHHHHHHHHHHHHTTSGGGHHHHH
T ss_pred hC-ccCchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 10 01235788888899999999999986665
No 2
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=97.51 E-value=0.00017 Score=77.30 Aligned_cols=305 Identities=17% Similarity=0.173 Sum_probs=177.4
Q ss_pred HhhhhhHHhhhhcc-ccccccCCCCC-Cchhhhh-------hhhhcccccc--cCCCCCCCCCCCCCChHHHHHHHhhcc
Q psy10178 297 NIRENVLVSLANIS-GHIDLDQYPED-ISRPILD-------GLLHWAVCPA--AQGQDPFPSSSCNLSPQRLALEALCKL 365 (655)
Q Consensus 297 ~LReNaLVtLaNia-gqLDLs~ypes-I~~PILd-------GLLHWaVCps--A~aqDPfps~~~~lSPqrlALEaL~KL 365 (655)
++|..|.-.|.||+ ||-|....--. ...++|+ .++.|.=+++ .+.|..+ .-.+..-+++-|+=+|.|+
T Consensus 97 ~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~qAv~aL~nl 175 (458)
T 3nmz_A 97 EARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQEAHEPGMDQDKNP-MPAPVEHQICPAVCVLMKL 175 (458)
T ss_dssp HHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCSCC---CCCTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhhHHHHHHHHhhccccccccCC-ccchhhHHHHHHHHHHHHh
Confidence 78888888999994 45443221000 0112222 2466754443 2211111 1112245677899999999
Q ss_pred ccccCCcceeecCCChhhHHHHHHHHHHhhc----------ccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHH
Q psy10178 366 CVTDNNVDLVIATPPYARLERLTYVLTRFLC----------KNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLL 435 (655)
Q Consensus 366 sI~d~NVdliLsTpPfsRle~L~~~LvrLL~----------~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~L 435 (655)
+..+.|-+.++.. ..+..|+++|. .+.....++.|..+|.||+.++......|....++|..|
T Consensus 176 s~~~e~R~~i~~~-------G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~L 248 (458)
T 3nmz_A 176 SFDEEHRHAMNEL-------GGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRAL 248 (458)
T ss_dssp TTSHHHHHHHHHT-------THHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHH
T ss_pred cCCHHHHHHHHHC-------CCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHH
Confidence 9999999999843 45556666663 223456789999999999999887555566677888888
Q ss_pred HHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccC--CCCCchhhHH--HHHHHHHHhhhhhhhH
Q psy10178 436 VAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH--PDNKPLFLQQ--EQRLLALVMSQILDQQ 511 (655)
Q Consensus 436 l~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~--peNr~~fl~~--E~RLL~L~mS~ilDs~ 511 (655)
+..|.. + +.++...|+.+|..|+.. ++||..+... =..|.++-..+ -+..
T Consensus 249 V~LL~s--------------------~-----~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s-~~~~ 302 (458)
T 3nmz_A 249 VAQLKS--------------------E-----SEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEV-KKES 302 (458)
T ss_dssp HHGGGC--------------------S-----CHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTC-CSHH
T ss_pred HHHHhC--------------------C-----CHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcC-CCHH
Confidence 888754 1 226677788999999875 3456555432 12455542221 1456
Q ss_pred HHHHHHHhhHhhccccccchhhhhHHHHhhH-hccCccccccccccccCCCC----c-cc--------------hHHHHH
Q psy10178 512 VAAIISRVLYQTRPDLYQNSEHASREKRKIV-TKKSVANQHGIGALRDNPDS----M-GT--------------SLDMLR 571 (655)
Q Consensus 512 V~~ilA~vLfels~~l~~~~~~~~~e~r~i~-~k~sv~~~~~~~~l~d~~~~----~-~~--------------~~~~~~ 571 (655)
+..-.+.+||.|+..--.++ .+|+ ..|-+. -|+..|....++ + -. +-...+
T Consensus 303 v~~~A~~aL~nLs~~~~~nk-------~~I~~~~Gal~--~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~ 373 (458)
T 3nmz_A 303 TLKSVLSALWNLSAHCTENK-------ADICAVDGALA--FLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQ 373 (458)
T ss_dssp HHHHHHHHHHHHHHHCHHHH-------HHHHHSTTHHH--HHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHccCCHHHH-------HHHHHhcCcHH--HHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHH
Confidence 66677788888875222223 3343 344444 355555443222 1 00 111222
Q ss_pred HHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHh-cCCCCchhhHHH--HHHHHHHHHHHhhhHHHHHHHHHHHHhhC
Q psy10178 572 RVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLS-RHPDNKPLFLQQ--EQRLLALVMSQILDQQVAAIISRVLYQTR 648 (655)
Q Consensus 572 ~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~la-k~~enr~~f~~~--e~RLL~l~mS~ild~~Va~~i~~vLf~~~ 648 (655)
.+.+..++..|-+- +...+.+....|+.+|..|+ ..++++..++.. -.-|.+|.-+ -|.+|-..-+.+|..|-
T Consensus 374 ~i~~~G~i~~Lv~L--L~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s--~~~~v~~~Aa~AL~nL~ 449 (458)
T 3nmz_A 374 ILRENNCLQTLLQH--LKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHS--KHKMIAMGSAAALRNLM 449 (458)
T ss_dssp HHHHTTHHHHHHHH--SSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTC--SSHHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHH--HcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhC--CCHHHHHHHHHHHHHHH
Confidence 23333333222111 11246778999999999999 578888877654 2344444323 26677777777777664
No 3
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=97.43 E-value=0.00014 Score=75.10 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=153.3
Q ss_pred hHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhc----------ccchhHHHHHHHHHHHHHhhcChhhHH
Q psy10178 354 PQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLC----------KNEDQVLREFGVNLLHYLAAADSAMSR 423 (655)
Q Consensus 354 PqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~----------~~~~~v~RE~AvvlL~nLa~~d~~~~r 423 (655)
..+-|+-+|.+++..+.|-+.++.. ..+..|+++|. .+.....++.|..+|.||+.++.....
T Consensus 48 ~~~~A~~aL~nls~d~e~R~~i~~~-------G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~ 120 (354)
T 3nmw_A 48 QICPAVCVLMKLSFDEEHRHAMNEL-------GGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKA 120 (354)
T ss_dssp THHHHHHHHHHHHTSHHHHHHHHHT-------THHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHc-------CCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3457889999999999999998833 45556666663 223466899999999999999887555
Q ss_pred HHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccC--CCCCchhhHH--HHHH
Q psy10178 424 TIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH--PDNKPLFLQQ--EQRL 499 (655)
Q Consensus 424 ~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~--peNr~~fl~~--E~RL 499 (655)
.|+...++|..|+.+|.. + +.++...|+.+|..|+.. ++||..+... =..|
T Consensus 121 ~i~~~~GaIp~LV~LL~s--------------------~-----~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~L 175 (354)
T 3nmw_A 121 TLCSMKGCMRALVAQLKS--------------------E-----SEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKAL 175 (354)
T ss_dssp HHHHCHHHHHHHHHGGGC--------------------S-----CHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHH
T ss_pred HHHHcCCcHHHHHHHHCC--------------------C-----CHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHH
Confidence 577778889999988854 1 126677799999999985 3566555432 2344
Q ss_pred HHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHHHHhhH-hccCccccccccccccCCCC----c-cc--------
Q psy10178 500 LALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIV-TKKSVANQHGIGALRDNPDS----M-GT-------- 565 (655)
Q Consensus 500 L~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e~r~i~-~k~sv~~~~~~~~l~d~~~~----~-~~-------- 565 (655)
..+-.++ -|..+..-.+.+|+.|+..--.+ +++|+ ..|-|- -|+..|.+..++ + -.
T Consensus 176 v~lL~~~-~~~~~~~~A~~aL~nLs~~~~~n-------k~~i~~~~Gai~--~Lv~lL~~~~~~~~~~v~~~A~~aL~nL 245 (354)
T 3nmw_A 176 MECALEV-KKESTLKSVLSALWNLSAHCTEN-------KADICAVDGALA--FLVGTLTYRSQTNTLAIIESGGGILRNV 245 (354)
T ss_dssp HHHHHHC-CCHHHHHHHHHHHHHHHTTCHHH-------HHHHHHSTTHHH--HHHHHTTCCCSSSCCHHHHHHHHHHHHH
T ss_pred HHHHhcC-CCHHHHHHHHHHHHHHHccChhh-------hHHHHHhcCcHH--HHHHHhccCCCcccHHHHHHHHHHHHHH
Confidence 4432221 24566667778899887522122 33444 445444 466666543322 1 00
Q ss_pred ------hHHHHHHHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHh-cCCCCchhhHHH--HHHHHHHHHHHhhhHHH
Q psy10178 566 ------SLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLS-RHPDNKPLFLQQ--EQRLLALVMSQILDQQV 636 (655)
Q Consensus 566 ------~~~~~~~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~la-k~~enr~~f~~~--e~RLL~l~mS~ild~~V 636 (655)
+-...+.+.+..++..|-+- +...+.+....|+.+|..|+ ..++++..++.. -..|.+|.-|. |..|
T Consensus 246 s~~~a~~~~~~~~i~~~g~i~~Lv~l--L~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~--~~~i 321 (354)
T 3nmw_A 246 SSLIATNEDHRQILRENNCLQTLLQH--LKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK--HKMI 321 (354)
T ss_dssp HHHHTTCHHHHHHHHTTTHHHHHHHH--TTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCS--SHHH
T ss_pred HhhccCCHHHHHHHHHcCCHHHHHHH--HcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCC--CHHH
Confidence 11122233333333222211 12356788999999999999 567888777654 23444443332 5566
Q ss_pred HHHHHHHHHhhC
Q psy10178 637 AAIISRVLYQTR 648 (655)
Q Consensus 637 a~~i~~vLf~~~ 648 (655)
-..-+.+|..|.
T Consensus 322 ~~~A~~aL~nL~ 333 (354)
T 3nmw_A 322 AMGSAAALRNLM 333 (354)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666654
No 4
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=97.41 E-value=0.00068 Score=69.09 Aligned_cols=248 Identities=17% Similarity=0.132 Sum_probs=144.9
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
.=|..|+++|++++..+.|...++ +.+..+..|+++|....+...|..|...|.+++..+.. ...+.. .+.|
T Consensus 32 ~v~~~A~~~L~~l~~~~~~~~~~~------~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~~~-~~~i~~-~g~i 103 (529)
T 1jdh_A 32 VVVNKAAVMVHQLSKKEASRHAIM------RSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREG-LLAIFK-SGGI 103 (529)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHH------TCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHH-HHHHHH-TTHH
T ss_pred HHHHHHHHHHHHHHcCCccHHHHH------hCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCchh-HHHHHH-cCCH
Confidence 347899999999999887765544 23567788888886655777899999999999887553 444444 4778
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHH---HHHHHHHHhhhhhh
Q psy10178 433 SLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQ---EQRLLALVMSQILD 509 (655)
Q Consensus 433 ~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~---E~RLL~L~mS~ilD 509 (655)
..|+++|.+ ++ .++...|+.+|..|+...++....+-. =..|..+..+. +
T Consensus 104 ~~L~~lL~~--------------------~~-----~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~--~ 156 (529)
T 1jdh_A 104 PALVKMLGS--------------------PV-----DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--N 156 (529)
T ss_dssp HHHHHHTTC--------------------SC-----HHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCC--C
T ss_pred HHHHHHHcC--------------------CC-----HHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcC--C
Confidence 888888754 11 257788999999999986543222211 12334443332 3
Q ss_pred hHHHHHHHHhhHhhccccccchhhhhHH-HHhhHhccCccccccccccccCCCCc------------cchHHHHHHHHhh
Q psy10178 510 QQVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVTKKSVANQHGIGALRDNPDSM------------GTSLDMLRRVANQ 576 (655)
Q Consensus 510 s~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~k~sv~~~~~~~~l~d~~~~~------------~~~~~~~~~~~~~ 576 (655)
.+|....+..|..+..+ ..| +.+|++.|.+. .++.+|++.++.- +.+-.....+.+.
T Consensus 157 ~~~~~~~~~~L~~la~~--------~~~~~~~i~~~~~i~--~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 226 (529)
T 1jdh_A 157 VKFLAITTDCLQILAYG--------NQESKLIILASGGPQ--ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEA 226 (529)
T ss_dssp HHHHHHHHHHHHHHHTT--------CHHHHHHHHHTTHHH--HHHHHHHHCCCHHHHHHHHHHHHHHTTSTTHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC--------CHHHHHHHHHCCCHH--HHHHHHHhCChHHHHHHHHHHHHHHhcCcccHHHHHHC
Confidence 45555666666655431 122 23346666555 6777777632110 0000012344444
Q ss_pred hhhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCc
Q psy10178 577 HGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRP 649 (655)
Q Consensus 577 hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~~~e~RLL~l~mS~ild~~Va~~i~~vLf~~~~ 649 (655)
.++..|.+- +...+.++.+.|+.+|..|++...........=..|+.+.-+ =|..|-...|.+|..+..
T Consensus 227 g~~~~L~~l--l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~--~~~~v~~~a~~~L~~L~~ 295 (529)
T 1jdh_A 227 GGMQALGLH--LTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGS--DDINVVTCAAGILSNLTC 295 (529)
T ss_dssp THHHHHHTT--TTSSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTC--SCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHH--HhCCChHHHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcC--CCHHHHHHHHHHHHHHhc
Confidence 555444322 112367888999999999998765543222222233333211 145555555666655543
No 5
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=97.18 E-value=0.0026 Score=68.57 Aligned_cols=214 Identities=17% Similarity=0.158 Sum_probs=132.9
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
.=|..|+.+|++|+..+.|...++ ..++.+..|+++|....+...|..|+..|.+|+..+.. ...+.. .+.|
T Consensus 29 ~vr~~A~~~L~~La~~~~~~~~i~------~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~-~~~i~~-~g~i 100 (644)
T 2z6h_A 29 VVVNKAAVMVHQLSKKEASRHAIM------RSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREG-LLAIFK-SGGI 100 (644)
T ss_dssp HHHHHHHHHHHHHHTSTTHHHHHT------TCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHH-HHHHHT-TTHH
T ss_pred HHHHHHHHHHHHHHCCChhHHHHH------hccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhh-HHHHHH-cCCH
Confidence 457899999999998887765443 23577788888887666778899999999999987653 334444 4778
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhH---HHHHHHHHHhhhhhh
Q psy10178 433 SLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQ---QEQRLLALVMSQILD 509 (655)
Q Consensus 433 ~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~---~E~RLL~L~mS~ilD 509 (655)
..|+.+|.. + ...+.+.|+.+|..|+...++....+- -=..|..+..+. +
T Consensus 101 ~~Lv~lL~~--------------------~-----~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~--~ 153 (644)
T 2z6h_A 101 PALVKMLGS--------------------P-----VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--N 153 (644)
T ss_dssp HHHHHHTTC--------------------S-----SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC--C
T ss_pred HHHHHHHhC--------------------C-----CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcC--C
Confidence 888887754 1 136778899999999987644322221 112334443332 3
Q ss_pred hHHHHHHHHhhHhhccccccchhhhhHHHHhhHhccCccccccccccccCCCC------------ccchHHHHHHHHhhh
Q psy10178 510 QQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDS------------MGTSLDMLRRVANQH 577 (655)
Q Consensus 510 s~V~~ilA~vLfels~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~~------------~~~~~~~~~~~~~~h 577 (655)
.++....++.|..++.. + ...+.+|++.|.|. .|+.+|++.... ++.+-...+++.+..
T Consensus 154 ~~~~~~a~~~L~~La~~---~----~~~~~~i~~~g~v~--~Lv~lL~~~~~~~~~~~a~~~L~nLs~~~~~~~~l~~~g 224 (644)
T 2z6h_A 154 VKFLAITTDCLQILAYG---N----QESKLIILASGGPQ--ALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAG 224 (644)
T ss_dssp HHHHHHHHHHHHHHHTT---C----HHHHHHHHHTTHHH--HHHHHHTTCCCHHHHHHHHHHHHHHTTCTTHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc---C----cHHHHHHHHcCChH--HHHHHHHcCChHHHHHHHHHHHHHHhcCcccHHHHHHCC
Confidence 45555666677766542 1 11133456666555 677777753210 000011234555555
Q ss_pred hhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCC
Q psy10178 578 GIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDN 612 (655)
Q Consensus 578 g~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~en 612 (655)
++..|..- +...+.++.+.|+.+|..|++....
T Consensus 225 ~l~~L~~l--l~~~~~~~~~~a~~~L~nL~~~~~~ 257 (644)
T 2z6h_A 225 GMQALGLH--LTDPSQRLVQNCLWTLRNLSDAATK 257 (644)
T ss_dssp HHHHHHTT--TTCSCHHHHHHHHHHHHHHGGGCTT
T ss_pred CHHHHHHH--HhcCCHHHHHHHHHHHHHHhhcchh
Confidence 55544332 1223678899999999999987644
No 6
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=97.14 E-value=0.0085 Score=63.21 Aligned_cols=220 Identities=18% Similarity=0.164 Sum_probs=136.9
Q ss_pred HHHHHHHhhccc-cccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHH
Q psy10178 355 QRLALEALCKLC-VTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433 (655)
Q Consensus 355 qrlALEaL~KLs-I~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~ 433 (655)
|..|+-+|+.++ -++.|...++ -.+.+..|+++|.. .+...|+.|+.+|.|++..+.. +|.+..+.+++.
T Consensus 118 q~~Aa~aL~nias~~~e~~~~vv-------~~GaIp~Lv~lL~s-~~~~v~e~A~~aL~nLa~d~~~-~r~~v~~~G~i~ 188 (510)
T 3ul1_B 118 QFESAWALTNIASGTSEQTKAVV-------DGGAIPAFISLLAS-PHAHISEQAVWALGNIAGDGSA-FRDLVIKHGAID 188 (510)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHH-------HTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHH-------HCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHhCCHH-HHHHHHHcCChH
Confidence 678999999985 4555655555 23456788898854 5567899999999999987666 666666778899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHH---HHHHHhhhhhhh
Q psy10178 434 LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQR---LLALVMSQILDQ 510 (655)
Q Consensus 434 ~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~R---LL~L~mS~ilDs 510 (655)
.|+.+|.. ++.-..+..++|.|+.+|..+++...+...+...+.- |..|..+ -|.
T Consensus 189 ~Ll~lL~~--------------------~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~--~~~ 246 (510)
T 3ul1_B 189 PLLALLAV--------------------PDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH--NDP 246 (510)
T ss_dssp HHHHHTCS--------------------SCGGGSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTC--SCH
T ss_pred HHHHHHHh--------------------ccchhhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhc--CCH
Confidence 99988864 2333345678999999999999987776665443332 2233222 355
Q ss_pred HHHHHHHHhhHhhccccccchhhhhHHHH-hhHhccCccccccccccccCCCCccc------------hHHHHHHHHhhh
Q psy10178 511 QVAAIISRVLYQTRPDLYQNSEHASREKR-KIVTKKSVANQHGIGALRDNPDSMGT------------SLDMLRRVANQH 577 (655)
Q Consensus 511 ~V~~ilA~vLfels~~l~~~~~~~~~e~r-~i~~k~sv~~~~~~~~l~d~~~~~~~------------~~~~~~~~~~~h 577 (655)
.|..-.|..|..++..- .|.. .|+..|-+. .|+.+|.+....+-. +-..++.+.+..
T Consensus 247 ~v~~~A~~aL~~L~~~~--------~~~~~~i~~~g~i~--~Lv~lL~~~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g 316 (510)
T 3ul1_B 247 EVLADSCWAISYLTDGP--------NERIEMVVKKGVVP--QLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAG 316 (510)
T ss_dssp HHHHHHHHHHHHHTSSC--------HHHHHHHHTTTCHH--HHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhch--------hhhHHHHHhcccch--hhhhhhcCCChhhhhHHHHHHHHhhcCCHHHHHHHhhcc
Confidence 66666677777776432 1222 234444444 466666542221100 012445566666
Q ss_pred hhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhH
Q psy10178 578 GIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFL 617 (655)
Q Consensus 578 g~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~ 617 (655)
++..|..- +--++.+.-+.|+.+|-.|+...++....+
T Consensus 317 ~l~~L~~L--L~~~~~~v~~~A~~aL~nl~a~~~~~~~~v 354 (510)
T 3ul1_B 317 ALAVFPSL--LTNPKTNIQKEATWTMSNITAGRQDQIQQV 354 (510)
T ss_dssp GGGGCC-C--TTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred chHHHHHH--hcCCCHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 66554321 122345677888899999987665544433
No 7
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.02 E-value=0.0028 Score=70.24 Aligned_cols=137 Identities=20% Similarity=0.153 Sum_probs=96.5
Q ss_pred hHHHHHHHhhcccc-ccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhc-ChhhHHHHhhcccc
Q psy10178 354 PQRLALEALCKLCV-TDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAA-DSAMSRTIALQSPC 431 (655)
Q Consensus 354 PqrlALEaL~KLsI-~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~-d~~~~r~iA~qk~~ 431 (655)
=|..|+.+|.++|. ++.|-..|. -.+-+..|+++|.. .+...++.|+..|.||+.+ +..-...|+ +.++
T Consensus 64 ~q~~Aa~~L~~La~~~~~~k~~V~-------~~G~Ip~LV~LL~s-~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~-~~Ga 134 (584)
T 3l6x_A 64 VKSNAAAYLQHLCYRNDKVKTDVR-------KLKGIPVLVGLLDH-PKKEVHLGACGALKNISFGRDQDNKIAIK-NCDG 134 (584)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHH-------HTTHHHHHHHGGGC-SSHHHHHHHHHHHHHHTSSSCHHHHHHHH-HTTH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHH-------HcCCcHHHHHHHCC-CCHHHHHHHHHHHHHHHccCCHHHHHHHH-HcCC
Confidence 46789999999997 566666555 33556789999854 5668899999999999987 455333344 4688
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHhh------
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMS------ 505 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RLL~L~mS------ 505 (655)
|..|+.+|... .+.++.+-|+.+|..|+.+++||..+.. + -+-.|+..
T Consensus 135 Ip~LV~LL~s~------------------------~~~~~~e~aa~aL~nLS~~~~~k~~I~~-~-alp~Lv~LL~~p~s 188 (584)
T 3l6x_A 135 VPALVRLLRKA------------------------RDMDLTEVITGTLWNLSSHDSIKMEIVD-H-ALHALTDEVIIPHS 188 (584)
T ss_dssp HHHHHHHHHHC------------------------CSHHHHHHHHHHHHHHTTSGGGHHHHHH-H-THHHHHHHTHHHHH
T ss_pred HHHHHHHHcCC------------------------CCHHHHHHHHHHHHHHhCCchhhHHHHh-c-cHHHHHHHHhcccc
Confidence 99999999861 1346677789999999999999888763 2 23222211
Q ss_pred -------------hhhhhHHHHHHHHhhHhhcc
Q psy10178 506 -------------QILDQQVAAIISRVLYQTRP 525 (655)
Q Consensus 506 -------------~ilDs~V~~ilA~vLfels~ 525 (655)
..-|..|-.--+.+|+.|+.
T Consensus 189 g~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~ 221 (584)
T 3l6x_A 189 GWEREPNEDCKPRHIEWESVLTNTAGCLRNVSS 221 (584)
T ss_dssp CCC----------CCCCHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHhc
Confidence 01134666667778888865
No 8
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=97.00 E-value=0.0058 Score=68.41 Aligned_cols=284 Identities=16% Similarity=0.115 Sum_probs=154.4
Q ss_pred HhhhhhHHhhhhccccccccCCCCCCc-hhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCccee
Q psy10178 297 NIRENVLVSLANISGHIDLDQYPEDIS-RPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLV 375 (655)
Q Consensus 297 ~LReNaLVtLaNiagqLDLs~ypesI~-~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdli 375 (655)
..|.+|+-.|.|++..-+- -..|. .-++..|+...-. .|+ +=+..|+.+|+.||....|.-..
T Consensus 208 ~vr~~Aa~aL~~Ls~~~~~---~~~i~~~g~I~~Lv~lL~~-----~~~--------~v~~~A~~aL~nLa~~~~~~~~~ 271 (780)
T 2z6g_A 208 ETARCTSGTLHNLSHHREG---LLAIFKSGGIPALVNMLGS-----PVD--------SVLFHAITTLHNLLLHQEGAKMA 271 (780)
T ss_dssp HHHHHHHHHHHHHHTSHHH---HHHHHHTTHHHHHHHHTTC-----SCH--------HHHHHHHHHHHHHHHHSTTHHHH
T ss_pred HHHHHHHHHHHHHhCCchh---HHHHHHcCCHHHHHHHHcC-----CCH--------HHHHHHHHHHHHHhCCChhhHHH
Confidence 6788999999998765321 00111 1122223222110 121 35789999999999886554332
Q ss_pred ecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHH-----HHHH----
Q psy10178 376 IATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQA-----EQNA---- 446 (655)
Q Consensus 376 LsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~-----~~na---- 446 (655)
+ +-...+..|+++|... +...++.|...|.+++.++......+. +.+++..|+.+|+.. ...+
T Consensus 272 v------~~~g~v~~Lv~lL~~~-~~~v~~~a~~aL~~La~~~~e~~~~i~-~~~~i~~Lv~lL~~~~~~~~~~~a~~aL 343 (780)
T 2z6g_A 272 V------RLAGGLQKMVALLNKT-NVKFLAITTDCLQILAYGNQESKLIIL-ASGGPQALVNIMRTYTYEKLLWTTSRVL 343 (780)
T ss_dssp H------HHTTHHHHHHHGGGCC-CHHHHHHHHHHHHHHHTTCHHHHHHHH-TTTHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred H------HHcCCHHHHHHHHhcC-CHHHHHHHHHHHHHHhcCChHHHHHHH-HcCCHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 2 2356788899998664 446689999999999987776444443 346789899888632 1111
Q ss_pred ----------HhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHHHHHHhhhhhhhHHHHHH
Q psy10178 447 ----------LGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAII 516 (655)
Q Consensus 447 ----------~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RLL~L~mS~ilDs~V~~il 516 (655)
..+.+..++..|-. -+...+..+.+.|+.+|..|++.......+-..-..|.++..+ -|..|..-.
T Consensus 344 ~~Ls~~~~~~~~i~~~g~l~~Ll~--lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~--~d~~vr~~A 419 (780)
T 2z6g_A 344 KVLSVCSSNKPAIVEAGGMQALGL--HLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGS--DDINVVTCA 419 (780)
T ss_dssp HHHHTSTTHHHHHHHTTHHHHHGG--GTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTC--SCHHHHHHH
T ss_pred HHhhcChHHHHHHHHhchHHHHHH--HHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcC--CCHHHHHHH
Confidence 11222222211110 0011245789999999999998765432222222334444332 366777777
Q ss_pred HHhhHhhccccccchhhhhHHHHhhHhccCccccccccccccCCCC--ccc--------------hHHHHH-HHHhhhhh
Q psy10178 517 SRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDS--MGT--------------SLDMLR-RVANQHGI 579 (655)
Q Consensus 517 A~vLfels~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~~--~~~--------------~~~~~~-~~~~~hg~ 579 (655)
+.+|..++..-.. .+.+|++.|-|. .|+..|.+..+. .-. ....+| .+.+..|+
T Consensus 420 ~~aL~~L~~~~~~-------~~~~i~~~g~i~--~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l 490 (780)
T 2z6g_A 420 AGILSNLTCNNYK-------NKMMVCQVGGIE--ALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHYGL 490 (780)
T ss_dssp HHHHHHHTSSCHH-------HHHHHHTTTHHH--HHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhCCHH-------HHHHHHHCCCHH--HHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCH
Confidence 7888777653211 122334444333 456555542111 000 001122 33334444
Q ss_pred cccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhHH
Q psy10178 580 GALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQ 618 (655)
Q Consensus 580 ~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~~ 618 (655)
..|.+-=. .+..-++...|+.+|-.|+..++|+..|..
T Consensus 491 ~~L~~lL~-~~~~~~v~~~A~~aL~nLa~~~~~~~~i~~ 528 (780)
T 2z6g_A 491 PVVVKLLH-PPSHWPLIKATVGLIRNLALCPANHAPLRE 528 (780)
T ss_dssp HHHHHTTS-TTCCHHHHHHHHHHHHHHHSSHHHHHHHHH
T ss_pred HHHHHHhc-CCChHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 43322100 011246778888899999999999866654
No 9
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.96 E-value=0.002 Score=58.77 Aligned_cols=214 Identities=15% Similarity=0.207 Sum_probs=132.5
Q ss_pred hHHHHHHHhhccccccC-CcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 354 PQRLALEALCKLCVTDN-NVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 354 PqrlALEaL~KLsI~d~-NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
=|..|+.+|+.++-... |...++ -...+..|+++|... +...|+.|..+|.+++..+......+ .+.+.+
T Consensus 18 ~~~~a~~~L~~l~~~~~~~~~~~~-------~~g~i~~L~~ll~~~-~~~v~~~a~~~L~~l~~~~~~~~~~~-~~~~~i 88 (252)
T 4hxt_A 18 TQKEAARDLAEIASGPASAIKAIV-------DAGGVEVLVKLLTST-DSEVQKEAARALANIASGPDEAIKAI-VDAGGV 88 (252)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHH-------HTTHHHHHHHHTTCS-CHHHHHHHHHHHHHHTTSCHHHHHHH-HHTTHH
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHH-------HCCCHHHHHHHHhCC-CHHHHHHHHHHHHHHHcCChHHHHHH-HHCCCH
Confidence 46789999999987665 555554 346788899998654 46789999999999999877755444 456678
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhcc-CCCCCchhhHH--HHHHHHHHhhhhhh
Q psy10178 433 SLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSR-HPDNKPLFLQQ--EQRLLALVMSQILD 509 (655)
Q Consensus 433 ~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk-~peNr~~fl~~--E~RLL~L~mS~ilD 509 (655)
..|+.+|.+ + +.++.+.|+.+|..|+. .++++..+... =..|.++..+ -|
T Consensus 89 ~~l~~ll~~--------------------~-----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~--~~ 141 (252)
T 4hxt_A 89 EVLVKLLTS--------------------T-----DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS--TD 141 (252)
T ss_dssp HHHHHHTTC--------------------S-----SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SC
T ss_pred HHHHHHHcC--------------------C-----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcC--CC
Confidence 888777753 1 24778889999999994 45555444432 2234444333 24
Q ss_pred hHHHHHHHHhhHhhccccccchhhhhHH-HHhhHhccCccccccccccccCCCCccc------------hHHHHHHHHhh
Q psy10178 510 QQVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVTKKSVANQHGIGALRDNPDSMGT------------SLDMLRRVANQ 576 (655)
Q Consensus 510 s~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~k~sv~~~~~~~~l~d~~~~~~~------------~~~~~~~~~~~ 576 (655)
..|..-.+.+|..+...- .+ ++.+++.|-+. .++.+|.+.+...-. .-...+.+.+.
T Consensus 142 ~~~~~~a~~~L~~l~~~~--------~~~~~~~~~~~~i~--~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~ 211 (252)
T 4hxt_A 142 SEVQKEAARALANIASGP--------DEAIKAIVDAGGVE--VLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDA 211 (252)
T ss_dssp HHHHHHHHHHHHHHTTSC--------HHHHHHHHHTTHHH--HHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCC--------HHHHHHHHHCcCHH--HHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHC
Confidence 567777777887776531 11 23445556555 577777653221110 11123344444
Q ss_pred hhhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchh
Q psy10178 577 HGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPL 615 (655)
Q Consensus 577 hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~ 615 (655)
.++..|.+- +...+.+.-+.|+.+|-.|+....++..
T Consensus 212 ~~i~~L~~l--l~~~~~~v~~~a~~~L~~l~~~~~~~~~ 248 (252)
T 4hxt_A 212 GGVEVLQKL--LTSTDSEVQKEAQRALENIKSGGWLEHH 248 (252)
T ss_dssp THHHHHHHG--GGCSCHHHHHHHHHHHHHHHHTCBCCC-
T ss_pred CCHHHHHHH--HCCCcHHHHHHHHHHHHHHHcCCCcccc
Confidence 454443321 1123457788888888888887766543
No 10
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=96.93 E-value=0.0046 Score=63.00 Aligned_cols=221 Identities=19% Similarity=0.171 Sum_probs=131.6
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCC
Q psy10178 385 ERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDS 464 (655)
Q Consensus 385 e~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~ 464 (655)
...+..|+++|. .++...|+.|+.+|.+++..+.. ...+....+++..|+++|... +
T Consensus 16 ~~~i~~Lv~lL~-~~~~~v~~~A~~~L~~l~~~~~~-~~~~~~~~~~i~~Lv~~L~~~-------------------~-- 72 (529)
T 1jdh_A 16 TRAIPELTKLLN-DEDQVVVNKAAVMVHQLSKKEAS-RHAIMRSPQMVSAIVRTMQNT-------------------N-- 72 (529)
T ss_dssp -CHHHHHHHHHT-CSCHHHHHHHHHHHHHHHTSHHH-HHHHHTCHHHHHHHHHHHHHC-------------------C--
T ss_pred HhhHHHHHHHhC-CCCHHHHHHHHHHHHHHHcCCcc-HHHHHhCcchHHHHHHHHhcC-------------------C--
Confidence 345677888875 66778899999999999987653 333444557888898888651 1
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCchhhHH--HHHHHHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHHHHhhH
Q psy10178 465 MGTSLDMLRRTARTLLHLSRHPDNKPLFLQQ--EQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIV 542 (655)
Q Consensus 465 ~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~--E~RLL~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e~r~i~ 542 (655)
+.++.+.|+.+|..|++.++++..+... =..|..+..+ -|..|...-+.+|+.+..+.-.. ++.|+
T Consensus 73 ---~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~--~~~~v~~~a~~~L~~l~~~~~~~-------~~~i~ 140 (529)
T 1jdh_A 73 ---DVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGS--PVDSVLFYAITTLHNLLLHQEGA-------KMAVR 140 (529)
T ss_dssp ---CHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHHHHCTTH-------HHHHH
T ss_pred ---CHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcC--CCHHHHHHHHHHHHHHhcCCcch-------HHHHH
Confidence 2367788999999999988877666542 2244444433 25567777788888876532111 23345
Q ss_pred hccCccccccccccccCCCCccc----hH--------HHHHHHHhhhhhcc----cccCCCCCCCcHHHHHHHHHHHHHH
Q psy10178 543 TKKSVANQHGIGALRDNPDSMGT----SL--------DMLRRVANQHGIGA----LRDNPDSMGTSLDMLRRTARTLLHL 606 (655)
Q Consensus 543 ~k~sv~~~~~~~~l~d~~~~~~~----~~--------~~~~~~~~~hg~~a----l~~~p~~~gtSv~MmrRAA~~L~~l 606 (655)
+.|-|- .++.+|.+.....-. .+ ...+.+.+..|+.. |++. ..-+....|+..|..|
T Consensus 141 ~~g~i~--~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~-----~~~~~~~~a~~~L~~l 213 (529)
T 1jdh_A 141 LAGGLQ--KMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-----TYEKLLWTTSRVLKVL 213 (529)
T ss_dssp HHTHHH--HHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-----CCHHHHHHHHHHHHHH
T ss_pred HcCCHH--HHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhC-----ChHHHHHHHHHHHHHH
Confidence 566555 688888762211100 00 01111222333322 2222 2234555678889999
Q ss_pred hcCCCCchhhHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhhCc
Q psy10178 607 SRHPDNKPLFLQQEQRLLALVMSQIL--DQQVAAIISRVLYQTRP 649 (655)
Q Consensus 607 ak~~enr~~f~~~e~RLL~l~mS~il--d~~Va~~i~~vLf~~~~ 649 (655)
+..+++|..++... .+...+.-+- |..|....+.+|..+..
T Consensus 214 ~~~~~~~~~~~~~g--~~~~L~~ll~~~~~~~~~~a~~~L~~l~~ 256 (529)
T 1jdh_A 214 SVCSSNKPAIVEAG--GMQALGLHLTDPSQRLVQNCLWTLRNLSD 256 (529)
T ss_dssp TTSTTHHHHHHHTT--HHHHHHTTTTSSCHHHHHHHHHHHHHHHT
T ss_pred hcCcccHHHHHHCC--CHHHHHHHHhCCChHHHHHHHHHHHHHhc
Confidence 99999998887532 3333222111 44555555666655543
No 11
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=96.91 E-value=0.002 Score=72.06 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=119.2
Q ss_pred hHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHH
Q psy10178 354 PQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433 (655)
Q Consensus 354 PqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~ 433 (655)
=|+.|+.+|++++..+.|...+. ..+.++..|+++|....+...|+.|+..|.+|+..+.. ...+.. .++|.
T Consensus 166 vr~~A~~~L~~L~~~~~~~~~i~------~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~Ls~~~~~-~~~i~~-~g~I~ 237 (780)
T 2z6g_A 166 VVNKAAVMVHQLSKKEASRHAIM------RSPQMVSAIVRTMQNTNDVETARCTSGTLHNLSHHREG-LLAIFK-SGGIP 237 (780)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHT------TCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSHHH-HHHHHH-TTHHH
T ss_pred HHHHHHHHHHHHhCCChhHHHHH------hccChHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchh-HHHHHH-cCCHH
Confidence 47899999999999887766544 23567788888887666788899999999999987554 444544 47888
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHH---HHHHHHhhhhhhh
Q psy10178 434 LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQ---RLLALVMSQILDQ 510 (655)
Q Consensus 434 ~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~---RLL~L~mS~ilDs 510 (655)
.|+.+|.. + +..+.+.|+.+|..|+...++....+.... .|..+..+ -+.
T Consensus 238 ~Lv~lL~~--------------------~-----~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~--~~~ 290 (780)
T 2z6g_A 238 ALVNMLGS--------------------P-----VDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK--TNV 290 (780)
T ss_dssp HHHHHTTC--------------------S-----CHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC--CCH
T ss_pred HHHHHHcC--------------------C-----CHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhc--CCH
Confidence 88888754 1 135677899999999998655433332111 23333333 234
Q ss_pred HHHHHHHHhhHhhccccccchhhhhHHHH-hhHhccCccccccccccccCCCCccchHHHHHHHHhhhhhcccccCCCCC
Q psy10178 511 QVAAIISRVLYQTRPDLYQNSEHASREKR-KIVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSM 589 (655)
Q Consensus 511 ~V~~ilA~vLfels~~l~~~~~~~~~e~r-~i~~k~sv~~~~~~~~l~d~~~~~~~~~~~~~~~~~~hg~~al~~~p~~~ 589 (655)
+|....++.|..++. .+.|.| +|++.|.|. .|+.+|++..
T Consensus 291 ~v~~~a~~aL~~La~--------~~~e~~~~i~~~~~i~--~Lv~lL~~~~----------------------------- 331 (780)
T 2z6g_A 291 KFLAITTDCLQILAY--------GNQESKLIILASGGPQ--ALVNIMRTYT----------------------------- 331 (780)
T ss_dssp HHHHHHHHHHHHHHT--------TCHHHHHHHHTTTHHH--HHHHHHTTCC-----------------------------
T ss_pred HHHHHHHHHHHHHhc--------CChHHHHHHHHcCCHH--HHHHHHhcCC-----------------------------
Confidence 555556666665542 112333 345555554 5666665411
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCchhhHH
Q psy10178 590 GTSLDMLRRTARTLLHLSRHPDNKPLFLQ 618 (655)
Q Consensus 590 gtSv~MmrRAA~~L~~lak~~enr~~f~~ 618 (655)
.-.....|+.+|..|+..++||..++.
T Consensus 332 --~~~~~~~a~~aL~~Ls~~~~~~~~i~~ 358 (780)
T 2z6g_A 332 --YEKLLWTTSRVLKVLSVCSSNKPAIVE 358 (780)
T ss_dssp --CHHHHHHHHHHHHHHHTSTTHHHHHHH
T ss_pred --HHHHHHHHHHHHHHhhcChHHHHHHHH
Confidence 112333456667777777777666554
No 12
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=96.80 E-value=0.014 Score=61.01 Aligned_cols=138 Identities=14% Similarity=0.137 Sum_probs=97.2
Q ss_pred ChHHHHHHHhhccccccCCcc-eeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCKLCVTDNNVD-LVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVd-liLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.=|..|+.+|.++|..+.|.. .+. -.+.+..|+++|. ..+...++.|+..|.||+..+......|+ +.++
T Consensus 17 ~~q~~A~~~L~~l~~~~~~~~~~i~-------~~g~i~~Lv~lL~-s~~~~~~~~A~~aL~nLa~~~~~~k~~i~-~~G~ 87 (457)
T 1xm9_A 17 KYQAIGAYYIQHTCFQDESAKQQVY-------QLGGICKLVDLLR-SPNQNVQQAAAGALRNLVFRSTTNKLETR-RQNG 87 (457)
T ss_dssp HHHHHHHHHHHHHTSSCSSHHHHHH-------HTTHHHHHHHHTT-SSCHHHHHHHHHHHHHHHSSCHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHH-------HcCCHHHHHHHHc-CCCHHHHHHHHHHHHHHhcCCHHHHHHHH-HcCC
Confidence 458899999999998777655 343 3456778889886 45667799999999999997666444454 5588
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHH---HHHHh----
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRL---LALVM---- 504 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RL---L~L~m---- 504 (655)
|..|+.+|... + +.++.+.|+.+|..|+.++++|..+.. .-+ .++..
T Consensus 88 i~~Lv~lL~~~-------------------~-----~~~~~~~a~~aL~nLa~~~~~~~~i~~--g~i~~Lv~ll~~~~s 141 (457)
T 1xm9_A 88 IREAVSLLRRT-------------------G-----NAEIQKQLTGLLWNLSSTDELKEELIA--DALPVLADRVIIPFS 141 (457)
T ss_dssp HHHHHHHHTTC-------------------C-----CHHHHHHHHHHHHHHHTSSSTHHHHHH--HHHHHHHHHTTHHHH
T ss_pred HHHHHHHHhhC-------------------C-----CHHHHHHHHHHHHHHhcCHHhHHHHHh--ccHHHHHHHHhcccc
Confidence 99999999630 1 236788899999999999988876654 332 22221
Q ss_pred ----hhh------hhhHHHHHHHHhhHhhcc
Q psy10178 505 ----SQI------LDQQVAAIISRVLYQTRP 525 (655)
Q Consensus 505 ----S~i------lDs~V~~ilA~vLfels~ 525 (655)
+.. .|..|-.--+.+|+.++.
T Consensus 142 ~~~~~~~~~~~e~~~~~v~~~a~~aL~nLs~ 172 (457)
T 1xm9_A 142 GWCDGNSNMSREVVDPEVFFNATGCLRNLSS 172 (457)
T ss_dssp TCC---------CCCHHHHHHHHHHHHHHTT
T ss_pred ccccCccchhcccccHHHHHHHHHHHHHHcc
Confidence 110 233444567778888875
No 13
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=96.67 E-value=0.014 Score=61.51 Aligned_cols=220 Identities=18% Similarity=0.166 Sum_probs=131.0
Q ss_pred HHHHHHHhhcccccc-CCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHH
Q psy10178 355 QRLALEALCKLCVTD-NNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433 (655)
Q Consensus 355 qrlALEaL~KLsI~d-~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~ 433 (655)
|..|+-+|+.++-.. .|...++ -.+.+..|+++|.. .+...|+.|+-+|.|++..+.. +|....+.+++.
T Consensus 137 q~~Aa~aL~nia~~~~~~~~~vv-------~~Gaip~Lv~LL~s-~~~~v~e~A~~aL~nLa~~~~~-~r~~i~~~g~i~ 207 (529)
T 3tpo_A 137 QFESAWALTNIASGTSEQTKAVV-------DGGAIPAFISLLAS-PHAHISEQAVWALGNIAGAGSA-FRDLVIKHGAID 207 (529)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHH-------HTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHH-------HCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHhccCHH-HHHHHHHcCCcH
Confidence 567888888887543 3333443 23466788998755 4557799999999999987777 566556678899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhHHHHHH---HHHHhhhhhhh
Q psy10178 434 LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRL---LALVMSQILDQ 510 (655)
Q Consensus 434 ~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~~E~RL---L~L~mS~ilDs 510 (655)
.|+.+|.. ++.-.....++|.|+.+|..+++...+...+..-+.-| ..|..+ -|.
T Consensus 208 ~Ll~lL~~--------------------~~~~~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~--~~~ 265 (529)
T 3tpo_A 208 PLLALLAV--------------------PDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHH--NDP 265 (529)
T ss_dssp HHHHTTCS--------------------SCGGGSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTS--SCH
T ss_pred HHHHHHhc--------------------cchhHhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcC--CcH
Confidence 89888754 22233456789999999999999877766654433322 222222 244
Q ss_pred HHHHHHHHhhHhhccccccchhhhhHHHH-hhHhccCccccccccccccCCCCccc------------hHHHHHHHHhhh
Q psy10178 511 QVAAIISRVLYQTRPDLYQNSEHASREKR-KIVTKKSVANQHGIGALRDNPDSMGT------------SLDMLRRVANQH 577 (655)
Q Consensus 511 ~V~~ilA~vLfels~~l~~~~~~~~~e~r-~i~~k~sv~~~~~~~~l~d~~~~~~~------------~~~~~~~~~~~h 577 (655)
.|..-.|..|..++..- .+.. .|+..|-+. .|+.+|.+.+...-. +-..++.+.+..
T Consensus 266 ~v~~~a~~aL~~l~~~~--------~~~~~~v~~~g~i~--~Lv~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g 335 (529)
T 3tpo_A 266 EVLADSCWAISYLTDGP--------NERIEMVVKKGVVP--QLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAG 335 (529)
T ss_dssp HHHHHHHHHHHHHHSSC--------HHHHHHHHTTTCHH--HHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhhh--------hhhHHHHHhccchH--HHHHHhcCCChhHHHHHHHHHHHHHccchHHHHHHhhcc
Confidence 45444555555554321 1222 234445444 466666542211100 011344555555
Q ss_pred hhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhH
Q psy10178 578 GIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFL 617 (655)
Q Consensus 578 g~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~ 617 (655)
++..|..- +-.++.+.-+.|+.+|-.|+...+.....+
T Consensus 336 ~l~~L~~L--L~~~~~~i~~~a~~aL~nl~~~~~~~~~~v 373 (529)
T 3tpo_A 336 ALAVFPSL--LTNPKTNIQKEATWTMSNITAGRQDQIQQV 373 (529)
T ss_dssp GGGGHHHH--TTCSSHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred cHHHHHHH--HcCCCHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 55443221 112345677889999999998766544433
No 14
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=96.56 E-value=0.018 Score=60.22 Aligned_cols=133 Identities=15% Similarity=0.100 Sum_probs=89.3
Q ss_pred ChHHHHHHHhhccccc-cCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCKLCVT-DNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~KLsI~-d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.=|+.|.-+|..|+.. +.|-..|... +-+..|+++|....+...++.|+.+|.|++..+. ....|. + ++
T Consensus 59 ~~~~~A~~aL~nLa~~~~~~k~~i~~~-------G~i~~Lv~lL~~~~~~~~~~~a~~aL~nLa~~~~-~~~~i~-~-g~ 128 (457)
T 1xm9_A 59 NVQQAAAGALRNLVFRSTTNKLETRRQ-------NGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDE-LKEELI-A-DA 128 (457)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHT-------TCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSS-THHHHH-H-HH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHc-------CCHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCHH-hHHHHH-h-cc
Confidence 3478999999999986 7787777643 3445788888756677889999999999998843 233355 4 89
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCC-CCcHHHHHHHHHHHHHhccCCCCCchhhHH---HHHHHHHHhh
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSM-GTSLDMLRRTARTLLHLSRHPDNKPLFLQQ---EQRLLALVMS 505 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~-gtSv~MlRRAA~~L~~LAk~peNr~~fl~~---E~RLL~L~mS 505 (655)
|..|+.+|.... +|... +.+++.. ....+|+|.|+.+|..|++.+++|..+... -..|..+..+
T Consensus 129 i~~Lv~ll~~~~---------s~~~~-~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 129 LPVLADRVIIPF---------SGWCD-GNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp HHHHHHHTTHHH---------HTCC----------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHhccc---------ccccc-CccchhcccccHHHHHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHh
Confidence 999999994310 00000 0001100 145689999999999999998887776644 2334444443
No 15
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=96.56 E-value=0.019 Score=63.66 Aligned_cols=173 Identities=16% Similarity=0.203 Sum_probs=108.0
Q ss_pred HHhhhhhccccccCc-hhhhhcCcchHHHHHHHHHhhhccccccccCCCCCCCCCccccccCCCCccchhhhHHHHHHHh
Q psy10178 220 ALSNILRNLTFVPGN-ELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENI 298 (655)
Q Consensus 220 cvSNIlR~LSFvPgN-e~emakh~~lL~iLgrlLlLhheH~~r~~~~~~y~~ed~d~~~~~~~~~~~~~~~Wwwd~l~~L 298 (655)
+...+|||||....| -..|.++.|+...|-++|.-+-.. . +.+ ..+
T Consensus 211 nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~------------~-------~~~--------------~~~ 257 (584)
T 3l6x_A 211 NTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQ------------K-------DSD--------------SKL 257 (584)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHT------------T-------CCS--------------CHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcc------------c-------Ccc--------------HHH
Confidence 456788999987654 556888999988888888322000 0 011 268
Q ss_pred hhhhHHhhhhcccccc-----ccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCcc
Q psy10178 299 RENVLVSLANISGHID-----LDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVD 373 (655)
Q Consensus 299 ReNaLVtLaNiagqLD-----Ls~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVd 373 (655)
.|||+.+|.|++.+++ +..|-+.+ ++ + +.+| +..+...+.
T Consensus 258 ~enav~aL~NLs~~~~~e~~~~~~~~~~~--------------~~----~-------~~~~----------~~~~~~Gve 302 (584)
T 3l6x_A 258 VENCVCLLRNLSYQVHREIPQAERYQEAA--------------PN----V-------ANNT----------GTSPARGYE 302 (584)
T ss_dssp HHHHHHHHHHHHTTHHHHSTTCCC-------------------------------------------------CCCCGGG
T ss_pred HHHHHHHHHHhhccccccccchhhhhhhc--------------cc----c-------cccc----------cccCchhHH
Confidence 9999999999998763 11221110 00 0 0011 111222232
Q ss_pred eeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhH---HHHhhccccHHHHHHHHHHHHHHHHhhh
Q psy10178 374 LVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS---RTIALQSPCISLLVAFIEQAEQNALGVA 450 (655)
Q Consensus 374 liLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~---r~iA~qk~~I~~Ll~FLE~~~~na~~va 450 (655)
.+. +...+..|+.+|........+|-|+.+|.||+.++...+ +.+-.+.+++..|+..|..
T Consensus 303 ~L~-------~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s--------- 366 (584)
T 3l6x_A 303 LLF-------QPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTN--------- 366 (584)
T ss_dssp GGG-------SHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGC---------
T ss_pred HHh-------cccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcC---------
Confidence 222 567788999998666677889999999999998763322 3222334456666666544
Q ss_pred hhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchh
Q psy10178 451 NQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLF 492 (655)
Q Consensus 451 n~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~f 492 (655)
+ +..+.+.|+.+|-.|+.++.|+..+
T Consensus 367 -----------~-----~~~v~~~A~~aL~nLs~~~~~~~~I 392 (584)
T 3l6x_A 367 -----------E-----HERVVKAASGALRNLAVDARNKELI 392 (584)
T ss_dssp -----------S-----CHHHHHHHHHHHHHHHTTCSCHHHH
T ss_pred -----------C-----CHHHHHHHHHHHHHHhCChhHHHHH
Confidence 2 2378899999999999999987544
No 16
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=96.51 E-value=0.017 Score=59.69 Aligned_cols=218 Identities=15% Similarity=0.121 Sum_probs=130.5
Q ss_pred ChHHHHHHHhhccccccC-CcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhc-ChhhHHHHhhccc
Q psy10178 353 SPQRLALEALCKLCVTDN-NVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAA-DSAMSRTIALQSP 430 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~-NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~-d~~~~r~iA~qk~ 430 (655)
+=|+.|..+|..||..++ |-..+. .....+..|+++|. ..+...++.|+..|.||+.. +.. .+..-.+.+
T Consensus 99 ~~q~~Aa~aL~nLa~~~~~~k~~i~------~~~GaIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~-~k~~i~~~G 170 (354)
T 3nmw_A 99 TLRRYAGMALTNLTFGDVANKATLC------SMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVN-SKKTLREVG 170 (354)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHH------HCHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHHTTCCHH-HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHH------HcCCcHHHHHHHHC-CCCHHHHHHHHHHHHHHhccCCHH-HHHHHHHCC
Confidence 458899999999998765 322221 13566788999985 45567899999999999986 444 444333568
Q ss_pred cHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhcc-CCCCCchhhHHHHHHH---HHHhhh
Q psy10178 431 CISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSR-HPDNKPLFLQQEQRLL---ALVMSQ 506 (655)
Q Consensus 431 ~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk-~peNr~~fl~~E~RLL---~L~mS~ 506 (655)
+|..|+.+|-.. . +.++.+.|+.+|..|+. +++||..+.....-+- .|..+.
T Consensus 171 ~Ip~Lv~lL~~~-------------------~-----~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~ 226 (354)
T 3nmw_A 171 SVKALMECALEV-------------------K-----KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYR 226 (354)
T ss_dssp HHHHHHHHHHHC-------------------C-----CHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCC
T ss_pred CHHHHHHHHhcC-------------------C-----CHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccC
Confidence 899999987431 1 23677889999999998 6677766653333333 332221
Q ss_pred hhhh---HHHHHHHHhhHhhccccccchhhhhHHHHhh-HhccCccccccccccccCCCCc-----------c-chHHHH
Q psy10178 507 ILDQ---QVAAIISRVLYQTRPDLYQNSEHASREKRKI-VTKKSVANQHGIGALRDNPDSM-----------G-TSLDML 570 (655)
Q Consensus 507 ilDs---~V~~ilA~vLfels~~l~~~~~~~~~e~r~i-~~k~sv~~~~~~~~l~d~~~~~-----------~-~~~~~~ 570 (655)
- +. .|..--+.+|+.++.-++.+ .|.|.. ++-|-+. .|+..|.+..... . .+-...
T Consensus 227 ~-~~~~~~v~~~A~~aL~nLs~~~a~~-----~~~~~~i~~~g~i~--~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~ 298 (354)
T 3nmw_A 227 S-QTNTLAIIESGGGILRNVSSLIATN-----EDHRQILRENNCLQ--TLLQHLKSHSLTIVSNACGTLWNLSARNPKDQ 298 (354)
T ss_dssp C-SSSCCHHHHHHHHHHHHHHHHHTTC-----HHHHHHHHTTTHHH--HHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHH
T ss_pred C-CcccHHHHHHHHHHHHHHHhhccCC-----HHHHHHHHHcCCHH--HHHHHHcCCChHHHHHHHHHHHHHhCCCHHHH
Confidence 0 11 25555566677765422111 222222 4444333 4555555321110 0 122355
Q ss_pred HHHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCC
Q psy10178 571 RRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDN 612 (655)
Q Consensus 571 ~~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~en 612 (655)
+.+.+..++..|.+- +...+..+-+.|+.+|..|+....+
T Consensus 299 ~~i~~~G~i~~Lv~L--L~s~~~~i~~~A~~aL~nL~~~~~~ 338 (354)
T 3nmw_A 299 EALWDMGAVSMLKNL--IHSKHKMIAMGSAAALRNLMANRPA 338 (354)
T ss_dssp HHHHHTTHHHHHHTT--TTCSSHHHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHCCCHHHHHHH--HhCCCHHHHHHHHHHHHHHHcCCHH
Confidence 566666666655432 1124566777889999999987554
No 17
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.49 E-value=0.028 Score=51.11 Aligned_cols=190 Identities=17% Similarity=0.233 Sum_probs=115.0
Q ss_pred HHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCC
Q psy10178 388 TYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGT 467 (655)
Q Consensus 388 ~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gt 467 (655)
+..|+++|.... ...|..|+..|.+++..+......+. +.+.|..|+.+|++ +
T Consensus 4 i~~L~~~L~~~~-~~~~~~a~~~L~~l~~~~~~~~~~~~-~~g~i~~L~~ll~~--------------------~----- 56 (252)
T 4hxt_A 4 VEKLVKLLTSTD-SETQKEAARDLAEIASGPASAIKAIV-DAGGVEVLVKLLTS--------------------T----- 56 (252)
T ss_dssp HHHHHHHTTCSC-HHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTC--------------------S-----
T ss_pred HHHHHHHHcCCC-HHHHHHHHHHHHHHhcCCcHHHHHHH-HCCCHHHHHHHHhC--------------------C-----
Confidence 456778875544 77899999999999999886444443 45778888888765 1
Q ss_pred cHHHHHHHHHHHHHhccC-CCCCchhhHH--HHHHHHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHH-HHhhHh
Q psy10178 468 SLDMLRRTARTLLHLSRH-PDNKPLFLQQ--EQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVT 543 (655)
Q Consensus 468 Sv~MlRRAA~~L~~LAk~-peNr~~fl~~--E~RLL~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~ 543 (655)
+.++.+.|+.+|..|+.. ++++..+... =..|..+..+ -|..|....+.+|..++... .+ ++.+++
T Consensus 57 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~--~~~~v~~~a~~~L~~l~~~~--------~~~~~~~~~ 126 (252)
T 4hxt_A 57 DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS--TDSEVQKEAARALANIASGP--------DEAIKAIVD 126 (252)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SSHHHHHHHHHHHHHHTTSC--------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHcC--CCHHHHHHHHHHHHHHHcCC--------HHHHHHHHH
Confidence 136778899999999987 6666555432 1223333332 24566666677777765421 12 223355
Q ss_pred ccCccccccccccccCCCCccchHHHHHHHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHhcCCCCchhhHHHHHHH
Q psy10178 544 KKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRL 623 (655)
Q Consensus 544 k~sv~~~~~~~~l~d~~~~~~~~~~~~~~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~~enr~~f~~~e~RL 623 (655)
.|-+. .++.+|.+ .+.++...|+.+|-.|+...+++...+. +...
T Consensus 127 ~~~i~--~L~~~l~~--------------------------------~~~~~~~~a~~~L~~l~~~~~~~~~~~~-~~~~ 171 (252)
T 4hxt_A 127 AGGVE--VLVKLLTS--------------------------------TDSEVQKEAARALANIASGPDEAIKAIV-DAGG 171 (252)
T ss_dssp TTHHH--HHHHHTTC--------------------------------SCHHHHHHHHHHHHHHTTSCHHHHHHHH-HTTH
T ss_pred CCCHH--HHHHHHcC--------------------------------CCHHHHHHHHHHHHHHHcCCHHHHHHHH-HCcC
Confidence 55444 46666643 3466788888888888886655432221 2233
Q ss_pred HHHHHHHhh--hHHHHHHHHHHHHhhCc
Q psy10178 624 LALVMSQIL--DQQVAAIISRVLYQTRP 649 (655)
Q Consensus 624 L~l~mS~il--d~~Va~~i~~vLf~~~~ 649 (655)
+...+.-+- |..|-...+.+|..+..
T Consensus 172 i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 199 (252)
T 4hxt_A 172 VEVLVKLLTSTDSEVQKEAARALANIAS 199 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHc
Confidence 333222221 34566666666666643
No 18
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=96.44 E-value=0.0068 Score=56.05 Aligned_cols=161 Identities=13% Similarity=0.180 Sum_probs=107.2
Q ss_pred ChHHHHHHHhhc-cccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCK-LCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~K-LsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.=|..|+.+|++ ++-.+.|...++ -.+.+..|+++|.... ...|+.|+.+|.+++.++......+ .+.+.
T Consensus 27 ~~~~~a~~~L~~~l~~~~~~~~~~~-------~~g~i~~L~~lL~~~~-~~v~~~a~~~L~~l~~~~~~~~~~i-~~~g~ 97 (252)
T 4db8_A 27 QEQLSATRKFSQILSDGNEQIQAVI-------DAGALPALVQLLSSPN-EQILQEALWALSNIASGGNEQIQAV-IDAGA 97 (252)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH-------HTTHHHHHHHGGGCSC-HHHHHHHHHHHHHHTTSCHHHHHHH-HHTTH
T ss_pred HHHHHHHHHHHHHHcCCCchHHHHH-------HcCcHHHHHHHHcCCC-HHHHHHHHHHHHHHhcCCHHHHHHH-HHcCC
Confidence 457788888866 444555555554 3467788999986554 6789999999999999887755444 34567
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCC-chhhHH--HHHHHHHHhhhhh
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNK-PLFLQQ--EQRLLALVMSQIL 508 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr-~~fl~~--E~RLL~L~mS~il 508 (655)
+..|+.+|.+ + +..+...|+.+|..|+..++++ ..+... =..|..+..+.
T Consensus 98 i~~L~~lL~~--------------------~-----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~-- 150 (252)
T 4db8_A 98 LPALVQLLSS--------------------P-----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-- 150 (252)
T ss_dssp HHHHHHGGGC--------------------S-----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--
T ss_pred HHHHHHHHcC--------------------C-----CHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCC--
Confidence 8888777654 1 1367788999999999988876 333321 12344444332
Q ss_pred hhHHHHHHHHhhHhhccccccchhhhhHH-HHhhHhccCccccccccccccC
Q psy10178 509 DQQVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVTKKSVANQHGIGALRDN 559 (655)
Q Consensus 509 Ds~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~k~sv~~~~~~~~l~d~ 559 (655)
|..|..-.+.+|..++..- .+ .+.+++.|-|- .++..|.+.
T Consensus 151 ~~~v~~~a~~~L~~l~~~~--------~~~~~~~~~~~~i~--~L~~ll~~~ 192 (252)
T 4db8_A 151 NEQILQEALWALSNIASGG--------NEQIQAVIDAGALP--ALVQLLSSP 192 (252)
T ss_dssp CHHHHHHHHHHHHHHTTSC--------HHHHHHHHHTTCHH--HHHHGGGCS
T ss_pred CHHHHHHHHHHHHHHHcCC--------hHHHHHHHHCCCHH--HHHHHHCCC
Confidence 5677777788888876532 22 23346666655 688888763
No 19
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.43 E-value=0.0043 Score=55.95 Aligned_cols=150 Identities=15% Similarity=0.212 Sum_probs=96.7
Q ss_pred chhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhcccc-ccCCcceeecCCChhhHHHHHHHHHHhhcccchh
Q psy10178 323 SRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCV-TDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQ 401 (655)
Q Consensus 323 ~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI-~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~ 401 (655)
..|.|-.||+.. |+ .=|..|+.+|+.++. .+.|...++ -.+.+..|+++|... +.
T Consensus 13 ~~~~l~~LL~s~--------~~--------~v~~~a~~~L~~l~~~~~~~~~~i~-------~~g~i~~L~~lL~~~-~~ 68 (210)
T 4db6_A 13 ELPQMVQQLNSP--------DQ--------QELQSALRKLSQIASGGNEQIQAVI-------DAGALPALVQLLSSP-NE 68 (210)
T ss_dssp CHHHHHHHTTCS--------CH--------HHHHHHHHHHHHHHTSCHHHHHHHH-------HTTHHHHHHHHTTCS-CH
T ss_pred hhHHHHHHhcCC--------CH--------HHHHHHHHHHHHHHcCCHHHHHHHH-------HcCCHHHHHHHHcCC-CH
Confidence 456677777652 32 346789999999984 455555544 336778899998654 66
Q ss_pred HHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHH
Q psy10178 402 VLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLH 481 (655)
Q Consensus 402 v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~ 481 (655)
..|+.|+.+|.|++.++......+ .+.+.|..|+.+|.+ + +..+.+.|+.+|..
T Consensus 69 ~v~~~a~~~L~~l~~~~~~~~~~i-~~~g~i~~L~~lL~~--------------------~-----~~~v~~~a~~~L~~ 122 (210)
T 4db6_A 69 QILQEALWALSNIASGGNEQIQAV-IDAGALPALVQLLSS--------------------P-----NEQILQEALWALSN 122 (210)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHH-HHTTCHHHHHHHTTC--------------------S-----CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHH-HHCCCHHHHHHHHcC--------------------C-----cHHHHHHHHHHHHH
Confidence 789999999999998887755444 456789999988754 2 23677889999999
Q ss_pred hccCCCCCc-hhhH--HHHHHHHHHhhhhhhhHHHHHHHHhhHhhc
Q psy10178 482 LSRHPDNKP-LFLQ--QEQRLLALVMSQILDQQVAAIISRVLYQTR 524 (655)
Q Consensus 482 LAk~peNr~-~fl~--~E~RLL~L~mS~ilDs~V~~ilA~vLfels 524 (655)
|+...++.. .++. .=..|.++..+. |..|....+.+|..+.
T Consensus 123 l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~ 166 (210)
T 4db6_A 123 IASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIA 166 (210)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHH
Confidence 997544321 1111 112333333322 4455555555555553
No 20
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=96.35 E-value=0.023 Score=65.31 Aligned_cols=190 Identities=19% Similarity=0.225 Sum_probs=131.7
Q ss_pred hhhHHhhhhHHHHhhhhhccccccCchhhhhcCcchHHHHHHHHHhhhccccccccCCCCCCCCCccccccCCCCccchh
Q psy10178 209 DSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAES 288 (655)
Q Consensus 209 e~qd~la~RcicvSNIlR~LSFvPgNe~emakh~~lL~iLgrlLlLhheH~~r~~~~~~y~~ed~d~~~~~~~~~~~~~~ 288 (655)
...|...+-+-+++||+-|-+=+ -..+....|.+..|-+++ .|+|
T Consensus 259 ~~~~~~~~a~~alt~i~~g~~~~---~~~~~~~~G~v~~li~Ll--~s~~------------------------------ 303 (810)
T 3now_A 259 PDMESKVRVTVAITALLNGPLDV---GNQVVAREGILQMILAMA--TTDD------------------------------ 303 (810)
T ss_dssp CCHHHHHHHHHHHHHHHSSSHHH---HHHHHHTTTHHHHHHHHH--HSSC------------------------------
T ss_pred CChHhHHHHHHHHHHHhcCCHHH---HHHHHhccchHHHHHHHh--CCCC------------------------------
Confidence 44566777899999998775433 344556679999998887 3333
Q ss_pred hhHHHHHHHhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccc
Q psy10178 289 EWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVT 368 (655)
Q Consensus 289 ~Wwwd~l~~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~ 368 (655)
...+++|+..+.|+++--+...|=-.-.-|+|-.++.- .|+ .=|..|+-+|||+...
T Consensus 304 -------~~~q~~A~~al~~aa~~~~~R~~I~~~gv~~L~~Ll~s--------~~~--------~vr~~Al~~L~kl~s~ 360 (810)
T 3now_A 304 -------ELQQRVACECLIAASSKKDKAKALCEQGVDILKRLYHS--------KND--------GIRVRALVGLCKLGSY 360 (810)
T ss_dssp -------HHHHHHHHHHHHHHTTSHHHHHTTHHHHHHHHHHHTTC--------SCH--------HHHHHHHHHHHHHHTT
T ss_pred -------HHHHHHHHHHHHHHcCCcHHHHHHHHcCcHHHHHHHcC--------CCH--------HHHHHHHHHHHHhccc
Confidence 36788899999998887665555322222555555532 111 2267899999999754
Q ss_pred cC-CcceeecCCChhh--HHHHHHHHHHhhcccc-hhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHH
Q psy10178 369 DN-NVDLVIATPPYAR--LERLTYVLTRFLCKNE-DQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQ 444 (655)
Q Consensus 369 d~-NVdliLsTpPfsR--le~L~~~LvrLL~~~~-~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~ 444 (655)
.. |-. .++|.- ++.|+..|+++|.... +...|+.|+-.|+||+.... ....+....++|..|+.++...
T Consensus 361 ~~~d~~----~~~~~~g~i~~Lv~~l~~lL~~~~~d~~v~~~AveaLayLS~~~~-vk~~lv~d~g~Ip~LV~LL~s~-- 433 (810)
T 3now_A 361 GGQDAA----IRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAE-CKEKLIEDKASIHALMDLARGG-- 433 (810)
T ss_dssp TTTTTS----CCSSTTTHHHHHHHHHHHHHHCSSCCSSHHHHHHHHHHHHTTSHH-HHHHHHHCHHHHHHHHHHHHTT--
T ss_pred cccCcc----ccchhhccHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCcH-HHHHHHHccchHHHHHHHhCCC--
Confidence 22 211 245533 7899999999998763 67789999999999998654 4777888889999999999751
Q ss_pred HHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCC
Q psy10178 445 NALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHP 486 (655)
Q Consensus 445 na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~p 486 (655)
++ .+...|+.+|..|++..
T Consensus 434 ----------------d~-------~i~~~al~~L~NLt~~~ 452 (810)
T 3now_A 434 ----------------NQ-------SCLYGVVTTFVNLCNAY 452 (810)
T ss_dssp ----------------CG-------GGHHHHHHHHHHHTTCS
T ss_pred ----------------Ch-------HHHHHHHHHHHHHcCCc
Confidence 11 24556788888888744
No 21
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=96.32 E-value=0.07 Score=55.30 Aligned_cols=229 Identities=15% Similarity=0.153 Sum_probs=131.5
Q ss_pred hHHHHHHHhhcccccc--CCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 354 PQRLALEALCKLCVTD--NNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 354 PqrlALEaL~KLsI~d--~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
-|..|+.+|+++.-.+ .+++.++ -..++..|+++|....+...|+.|+..|.+++.++...... ..+.++
T Consensus 90 ~~~~A~~~L~~l~s~~~~~~~~~~~-------~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~-~~~~g~ 161 (528)
T 4b8j_A 90 LQLEATTQFRKLLSIERSPPIEEVI-------QSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKV-VIDHGA 161 (528)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHH-------HTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHH-HHHTTH
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHH-------HCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHH-HHhCCc
Confidence 4667889999985443 3444443 33567788888876655788999999999999987774443 345588
Q ss_pred HHHHHHHHHH----HHHH-HHhhhhhcc--------------cCc----CCCCCCCCCCcHHHHHHHHHHHHHhccCCCC
Q psy10178 432 ISLLVAFIEQ----AEQN-ALGVANQHG--------------IGA----LRDNPDSMGTSLDMLRRTARTLLHLSRHPDN 488 (655)
Q Consensus 432 I~~Ll~FLE~----~~~n-a~~van~hg--------------i~a----L~~~Pe~~gtSv~MlRRAA~~L~~LAk~peN 488 (655)
|..|+.+|.+ .++. +..+.|..+ +.. |+. ..+..+.+.|+.+|..|+....+
T Consensus 162 i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~-----~~~~~v~~~a~~~L~~L~~~~~~ 236 (528)
T 4b8j_A 162 VPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNE-----HTKLSMLRNATWTLSNFCRGKPQ 236 (528)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCT-----TCCHHHHHHHHHHHHHHHCSSSC
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhc-----CCCHHHHHHHHHHHHHHHcCCCC
Confidence 9999988843 2222 223333321 111 111 23568999999999999997543
Q ss_pred Cchhh--HHHHHHHHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHHHHhhHhccCccccccccccccCCCCccch
Q psy10178 489 KPLFL--QQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDSMGTS 566 (655)
Q Consensus 489 r~~fl--~~E~RLL~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~~~~~~ 566 (655)
..... ..=..|..+..+ -|..|..-.+.+|..++..--.. ...++..|-|. .++..|.+.....-..
T Consensus 237 ~~~~~~~~~l~~L~~lL~~--~~~~v~~~a~~aL~~l~~~~~~~-------~~~~~~~g~v~--~Lv~lL~~~~~~v~~~ 305 (528)
T 4b8j_A 237 PSFEQTRPALPALARLIHS--NDEEVLTDACWALSYLSDGTNDK-------IQAVIEAGVCP--RLVELLLHPSPSVLIP 305 (528)
T ss_dssp CCHHHHTTHHHHHHHHTTC--CCHHHHHHHHHHHHHHTSSCHHH-------HHHHHHTTCHH--HHHHHTTCSCHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHcCCHHH-------HHHHHHcCHHH--HHHHHHcCCChhHHHH
Confidence 32221 112233333322 36667777777777776431110 12334445555 5777776532111000
Q ss_pred ------------HHHHHHHHhhhhhcccc---cCCCCCCCcHHHHHHHHHHHHHHhcCC
Q psy10178 567 ------------LDMLRRVANQHGIGALR---DNPDSMGTSLDMLRRTARTLLHLSRHP 610 (655)
Q Consensus 567 ------------~~~~~~~~~~hg~~al~---~~p~~~gtSv~MmrRAA~~L~~lak~~ 610 (655)
-...+.+.+..++..|. .++ .+.+.-+.|+.+|-.|+...
T Consensus 306 a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~----~~~~v~~~A~~~L~nl~~~~ 360 (528)
T 4b8j_A 306 ALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQN----LKKSIKKEACWTISNITAGN 360 (528)
T ss_dssp HHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSC----CCHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCC----CcHHHHHHHHHHHHHHHCCC
Confidence 01233344443433322 222 25677788899999999743
No 22
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=96.23 E-value=0.062 Score=53.37 Aligned_cols=247 Identities=13% Similarity=0.097 Sum_probs=136.4
Q ss_pred ChHHHHHHHhhcccccc-CCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCKLCVTD-NNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d-~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.-|..|+.+|++++-.. .|...++ -..++..|+++|.. .++..|+.|+.+|.+++..+.. .+....+.+.
T Consensus 80 ~v~~~a~~~L~~l~~~~~~~~~~~~-------~~~~i~~L~~lL~~-~~~~vr~~a~~~L~~l~~~~~~-~~~~~~~~~~ 150 (450)
T 2jdq_A 80 TLQFESAWVLTNIASGNSLQTRIVI-------QAGAVPIFIELLSS-EFEDVQEQAVWALGNIAGDSTM-CRDYVLDCNI 150 (450)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHH-------HTTHHHHHHHHTTC-SCHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHH-------hCCCHHHHHHHHcC-CCHHHHHHHHHHHHHHccCCHH-HHHHHHHCCC
Confidence 34778999999998742 3332222 24678889999865 4678899999999999998766 4444445677
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCC--CCCchhh-HHHHHHHHHHhhhhh
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHP--DNKPLFL-QQEQRLLALVMSQIL 508 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~p--eNr~~fl-~~E~RLL~L~mS~il 508 (655)
+..|+.++.. ..+..+.+.|+.+|..|++.. ..+..+. ..=..|+.+..+ -
T Consensus 151 i~~L~~~l~~------------------------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~--~ 204 (450)
T 2jdq_A 151 LPPLLQLFSK------------------------QNRLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLFV--S 204 (450)
T ss_dssp HHHHHHHTTS------------------------CCCHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTTC--C
T ss_pred HHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHcc--C
Confidence 8888888753 023467788889999999764 3332222 222334444332 2
Q ss_pred hhHHHHHHHHhhHhhccccccchhhhhHHHHhhHhccCccccccccccccCCCCccch-H-----------HHHHHHHhh
Q psy10178 509 DQQVAAIISRVLYQTRPDLYQNSEHASREKRKIVTKKSVANQHGIGALRDNPDSMGTS-L-----------DMLRRVANQ 576 (655)
Q Consensus 509 Ds~V~~ilA~vLfels~~l~~~~~~~~~e~r~i~~k~sv~~~~~~~~l~d~~~~~~~~-~-----------~~~~~~~~~ 576 (655)
|..|....+.+|..+...... ..+.++..|-+. .++.+|.|.+...-.. + ...+.+.+.
T Consensus 205 ~~~v~~~a~~~L~~l~~~~~~-------~~~~~~~~~~i~--~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~ 275 (450)
T 2jdq_A 205 DTDVLADACWALSYLSDGPND-------KIQAVIDAGVCR--RLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQVILNC 275 (450)
T ss_dssp CHHHHHHHHHHHHHHTSSSHH-------HHHHHHHTTTHH--HHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHCCCcH-------HHHHHHHcCcHH--HHHHHHCCCchhHHHHHHHHHHHHhhCChHHHHHHHHC
Confidence 556666667777766543211 122334445444 5677776532211000 0 123334444
Q ss_pred hhhcccccCCCCCCCcHHHHHHHHHHHHHHhcC-CCCchhhHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHhh
Q psy10178 577 HGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH-PDNKPLFLQQEQRLLALVMSQIL--DQQVAAIISRVLYQT 647 (655)
Q Consensus 577 hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~-~enr~~f~~~e~RLL~l~mS~il--d~~Va~~i~~vLf~~ 647 (655)
+++..|.+- +...+...-+.|+.+|-.|+.. +++...++ +..++...+.-+- |..|-...|.+|..+
T Consensus 276 ~~l~~L~~l--l~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~--~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l 345 (450)
T 2jdq_A 276 SALQSLLHL--LSSPKESIKKEACWTISNITAGNRAQIQTVI--DANIFPALISILQTAEFRTRKEAAWAITNA 345 (450)
T ss_dssp THHHHHHHH--TTCSSHHHHHHHHHHHHHHTTSCHHHHHHHH--HTTHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHH--HcCCCHHHHHHHHHHHHHHHcCCHHHHHHHH--HCCCHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 444433221 0112456777788888888863 33333332 2233333332222 344555555555444
No 23
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.20 E-value=0.014 Score=52.53 Aligned_cols=193 Identities=12% Similarity=0.151 Sum_probs=111.8
Q ss_pred hHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCC
Q psy10178 383 RLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNP 462 (655)
Q Consensus 383 Rle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~P 462 (655)
+-+..+..|++||. ..+...|+.|...|.+++.++......+. +.+.|..|+.+|.+ +
T Consensus 9 ~~~~~~~~l~~LL~-s~~~~v~~~a~~~L~~l~~~~~~~~~~i~-~~g~i~~L~~lL~~--------------------~ 66 (210)
T 4db6_A 9 HHGSELPQMVQQLN-SPDQQELQSALRKLSQIASGGNEQIQAVI-DAGALPALVQLLSS--------------------P 66 (210)
T ss_dssp ----CHHHHHHHTT-CSCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHHHHHHHHTTC--------------------S
T ss_pred cccchhHHHHHHhc-CCCHHHHHHHHHHHHHHHcCCHHHHHHHH-HcCCHHHHHHHHcC--------------------C
Confidence 35667789999984 56678899999999999988877554443 44778888888754 1
Q ss_pred CCCCCcHHHHHHHHHHHHHhccC-CCCCchhhHH--HHHHHHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHH-H
Q psy10178 463 DSMGTSLDMLRRTARTLLHLSRH-PDNKPLFLQQ--EQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASRE-K 538 (655)
Q Consensus 463 e~~gtSv~MlRRAA~~L~~LAk~-peNr~~fl~~--E~RLL~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e-~ 538 (655)
+.++...|+.+|..|+.. ++++..+... =..|..+..+. |..|..--+.+|..+...- .+ .
T Consensus 67 -----~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~--------~~~~ 131 (210)
T 4db6_A 67 -----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGG--------NEQI 131 (210)
T ss_dssp -----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSC--------HHHH
T ss_pred -----CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHcCC--------HHHH
Confidence 236777899999999853 3444433321 12333333332 4455555566666554311 11 1
Q ss_pred HhhHhccCccccccccccccCCCCccchHHHHHHHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHhcC-CCCchhhH
Q psy10178 539 RKIVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH-PDNKPLFL 617 (655)
Q Consensus 539 r~i~~k~sv~~~~~~~~l~d~~~~~~~~~~~~~~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~-~enr~~f~ 617 (655)
+++++.|-+. .|+.+|. + .+.+.-+.|+.+|..|+.. ++++..+.
T Consensus 132 ~~~~~~~~i~--~L~~ll~---------------------------~-----~~~~v~~~a~~aL~~l~~~~~~~~~~~~ 177 (210)
T 4db6_A 132 QAVIDAGALP--ALVQLLS---------------------------S-----PNEQILQEALWALSNIASGGNEQKQAVK 177 (210)
T ss_dssp HHHHHTTHHH--HHHHHTT---------------------------C-----SCHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHcCcHH--HHHHHHc---------------------------C-----CCHHHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 2234443333 2333332 1 2467788889999999988 55665554
Q ss_pred HHH--HHHHHHHHHHhhhHHHHHHHHHHHHhhC
Q psy10178 618 QQE--QRLLALVMSQILDQQVAAIISRVLYQTR 648 (655)
Q Consensus 618 ~~e--~RLL~l~mS~ild~~Va~~i~~vLf~~~ 648 (655)
... ..|+.+.-+ =|..|-..-+..|-.+.
T Consensus 178 ~~g~i~~L~~ll~~--~~~~v~~~a~~aL~~l~ 208 (210)
T 4db6_A 178 EAGALEKLEQLQSH--ENEKIQKEAQEALEKLQ 208 (210)
T ss_dssp HTTHHHHHHHGGGC--SCHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHhC--CCHHHHHHHHHHHHHHh
Confidence 321 233333222 24566666666665554
No 24
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=96.03 E-value=0.024 Score=58.81 Aligned_cols=139 Identities=14% Similarity=0.183 Sum_probs=89.6
Q ss_pred HhhhhhHHhhhhcccccccc---CCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccc-cCCc
Q psy10178 297 NIRENVLVSLANISGHIDLD---QYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVT-DNNV 372 (655)
Q Consensus 297 ~LReNaLVtLaNiagqLDLs---~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~-d~NV 372 (655)
.+|.+|+-.|+|++..-+-. .+... ++..|++..- ++ .-.-+..|+.+|+.++.. +.+.
T Consensus 259 ~v~~~a~~aL~~l~~~~~~~~~~~~~~g----~v~~Lv~lL~-------~~------~~~v~~~a~~~L~nl~~~~~~~~ 321 (528)
T 4b8j_A 259 EVLTDACWALSYLSDGTNDKIQAVIEAG----VCPRLVELLL-------HP------SPSVLIPALRTVGNIVTGDDAQT 321 (528)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHTT----CHHHHHHHTT-------CS------CHHHHHHHHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHcC----HHHHHHHHHc-------CC------ChhHHHHHHHHHHHHHcCCHHHH
Confidence 68899999999998543210 00111 1222222211 11 013467899999999873 3333
Q ss_pred ceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhh
Q psy10178 373 DLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQ 452 (655)
Q Consensus 373 dliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~ 452 (655)
..++ -.+++..|+++|....+...|+.|+.+|.|++.++......+. +.+.+..|+..|...
T Consensus 322 ~~~~-------~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~-~~~~i~~L~~lL~~~---------- 383 (528)
T 4b8j_A 322 QCII-------DHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVI-NAGIIGPLVNLLQTA---------- 383 (528)
T ss_dssp HHHH-------TTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTCHHHHHHHHHHS----------
T ss_pred HHHH-------HhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHH-HCCCHHHHHHHHhcC----------
Confidence 3333 2456778888887654678899999999999998776544433 347789999998761
Q ss_pred cccCcCCCCCCCCCCcHHHHHHHHHHHHHhccC
Q psy10178 453 HGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH 485 (655)
Q Consensus 453 hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~ 485 (655)
..++.+.|+.+|..|+..
T Consensus 384 ---------------~~~v~~~a~~aL~nl~~~ 401 (528)
T 4b8j_A 384 ---------------EFDIKKEAAWAISNATSG 401 (528)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHH
T ss_pred ---------------CHHHHHHHHHHHHHHHcC
Confidence 125677788899999876
No 25
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=95.85 E-value=0.028 Score=60.25 Aligned_cols=215 Identities=15% Similarity=0.126 Sum_probs=128.7
Q ss_pred ChHHHHHHHhhccccccC-CcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhc-ChhhHHHHhhccc
Q psy10178 353 SPQRLALEALCKLCVTDN-NVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAA-DSAMSRTIALQSP 430 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~-NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~-d~~~~r~iA~qk~ 430 (655)
+=|+.|..+|..||..++ |-..+. .....+..|+++|. ..+...++.|+.+|.||+.+ |.. .+..-.+.+
T Consensus 215 ~l~~~Aa~aL~nLa~~~~~~k~~i~------~~~GaIp~LV~LL~-s~~~~v~~~A~~aL~nLs~~~~~~-~k~~I~~~G 286 (458)
T 3nmz_A 215 TLRRYAGMALTNLTFGDVANKATLC------SMKGCMRALVAQLK-SESEDLQQVIASVLRNLSWRADVN-SKKTLREVG 286 (458)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHH------HCHHHHHHHHHGGG-CSCHHHHHHHHHHHHHHTSSCCHH-HHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCcccHHHHH------HcCCcHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCCHH-HHHHHHHcC
Confidence 348899999999998776 322221 23566788999986 45667899999999999986 444 444334668
Q ss_pred cHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhcc-CCCCCchhhHHHHHHHHHH---hhh
Q psy10178 431 CISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSR-HPDNKPLFLQQEQRLLALV---MSQ 506 (655)
Q Consensus 431 ~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk-~peNr~~fl~~E~RLL~L~---mS~ 506 (655)
+|..|+.+|-. ..+..+.+.|+.+|..|+. +++|+..+.....-+--|. .+.
T Consensus 287 aI~~LV~lLl~------------------------s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~ 342 (458)
T 3nmz_A 287 SVKALMECALE------------------------VKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYR 342 (458)
T ss_dssp HHHHHHHHHTT------------------------CCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCC
T ss_pred CHHHHHHHHhc------------------------CCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCC
Confidence 89999988632 0123677889999999998 6688776653333333222 211
Q ss_pred hhhh---HHHHHHHHhhHhhccccccchhhhhHHHHh-hHhccCccccccccccccCCCCc-----------c-chHHHH
Q psy10178 507 ILDQ---QVAAIISRVLYQTRPDLYQNSEHASREKRK-IVTKKSVANQHGIGALRDNPDSM-----------G-TSLDML 570 (655)
Q Consensus 507 ilDs---~V~~ilA~vLfels~~l~~~~~~~~~e~r~-i~~k~sv~~~~~~~~l~d~~~~~-----------~-~~~~~~ 570 (655)
-+. .|..--+.+|+.++.-+..+. |.|. |++-|-|. .|+..|.+.+... . .+-...
T Consensus 343 -~~~~~~~v~~~A~~aL~nLs~~~a~~~-----~~~~~i~~~G~i~--~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~ 414 (458)
T 3nmz_A 343 -SQTNTLAIIESGGGILRNVSSLIATNE-----DHRQILRENNCLQ--TLLQHLKSHSLTIVSNACGTLWNLSARNPKDQ 414 (458)
T ss_dssp -CSSSTTHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHTTHHH--HHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHH
T ss_pred -CCcchHHHHHHHHHHHHHHHhcccCCH-----HHHHHHHHcccHH--HHHHHHcCCChHHHHHHHHHHHHHHcCCHHHH
Confidence 011 244445666776654211122 2222 24444333 4555554321110 0 122355
Q ss_pred HHHHhhhhhcccccCCCCCCCcHHHHHHHHHHHHHHhcC
Q psy10178 571 RRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH 609 (655)
Q Consensus 571 ~~~~~~hg~~al~~~p~~~gtSv~MmrRAA~~L~~lak~ 609 (655)
+++.+..++..|.+- +...+-.+-..|+.+|..|+..
T Consensus 415 ~~i~~~G~I~~Lv~L--L~s~~~~v~~~Aa~AL~nL~~~ 451 (458)
T 3nmz_A 415 EALWDMGAVSMLKNL--IHSKHKMIAMGSAAALRNLMAN 451 (458)
T ss_dssp HHHHHHTHHHHHHTT--TTCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHCCCHHHHHHH--HhCCCHHHHHHHHHHHHHHHcC
Confidence 666666666665442 1234566778888999999865
No 26
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.54 E-value=0.018 Score=53.24 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=90.7
Q ss_pred ChHHHHHHHhhcccc-ccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCKLCV-TDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~KLsI-~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.-+..|+.+|+.++. .+.|...++ -.+.+..|+++|.. .+...|+.|+.+|.|++..+...... ..+.+.
T Consensus 69 ~v~~~a~~~L~~l~~~~~~~~~~i~-------~~g~i~~L~~lL~~-~~~~v~~~a~~~L~~l~~~~~~~~~~-~~~~~~ 139 (252)
T 4db8_A 69 QILQEALWALSNIASGGNEQIQAVI-------DAGALPALVQLLSS-PNEQILQEALWALSNIASGGNEQIQA-VIDAGA 139 (252)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHH-------HTTHHHHHHHGGGC-SCHHHHHHHHHHHHHHTTSCHHHHHH-HHHTTH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHH-------HcCCHHHHHHHHcC-CCHHHHHHHHHHHHHhhcCCchHHHH-HHHCCC
Confidence 357899999999997 567766665 23567788999865 56788999999999999987764233 345567
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCc-hhhH--HHHHHHHHHhhhhh
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKP-LFLQ--QEQRLLALVMSQIL 508 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~-~fl~--~E~RLL~L~mS~il 508 (655)
+..|+.+|.+ + +..+...|+.+|..|+...+... .+.. .=..|..+..+.
T Consensus 140 i~~L~~lL~~--------------------~-----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~-- 192 (252)
T 4db8_A 140 LPALVQLLSS--------------------P-----NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP-- 192 (252)
T ss_dssp HHHHHHGGGC--------------------S-----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCS--
T ss_pred HHHHHHHHhC--------------------C-----CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCC--
Confidence 8888887754 1 23678889999999998653322 1111 112344444333
Q ss_pred hhHHHHHHHHhhHhhc
Q psy10178 509 DQQVAAIISRVLYQTR 524 (655)
Q Consensus 509 Ds~V~~ilA~vLfels 524 (655)
|..|....+.+|..+.
T Consensus 193 ~~~v~~~a~~~L~~l~ 208 (252)
T 4db8_A 193 NEQILQEALWALSNIA 208 (252)
T ss_dssp SHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHh
Confidence 4555555666666654
No 27
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.24 E-value=0.062 Score=54.21 Aligned_cols=158 Identities=16% Similarity=0.144 Sum_probs=99.0
Q ss_pred HHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHH
Q psy10178 355 QRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTR-FLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433 (655)
Q Consensus 355 qrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~Lvr-LL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~ 433 (655)
+..||+.|..++=+.+|..-+...+- +..|+. +|. +.+...|+.|+-+|.|+++.+.. ++....+.+++.
T Consensus 57 k~~Al~~L~~lv~~~dna~~~~~~G~-------l~~Lv~~lL~-s~~~~vr~~Aa~~Lg~ia~~n~~-~~~~vv~~g~l~ 127 (296)
T 1xqr_A 57 REGALELLADLCENMDNAADFCQLSG-------MHLLVGRYLE-AGAAGLRWRAAQLIGTCSQNVAA-IQEQVLGLGALR 127 (296)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHTTH-------HHHHHHTTTT-CSSHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHhChhhHHHHHHcCC-------HHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHH-HHHHHHHCCCHH
Confidence 34688888888887777765553332 346667 875 55678899999999999998887 555555668899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCC-CchhhHHH--HHHHHHHhhhhhhh
Q psy10178 434 LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDN-KPLFLQQE--QRLLALVMSQILDQ 510 (655)
Q Consensus 434 ~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peN-r~~fl~~E--~RLL~L~mS~ilDs 510 (655)
.|+.+|.. .+ +..+.+.|+-+|-.|++...+ ...|.... ..|..+..+ -|.
T Consensus 128 ~Ll~LL~~-------------------~~-----~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~--~d~ 181 (296)
T 1xqr_A 128 KLLRLLDR-------------------DA-----CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ--QVQ 181 (296)
T ss_dssp HHHHHHHH-------------------CS-----CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHS--SCH
T ss_pred HHHHHHcc-------------------CC-----CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcC--CCH
Confidence 99999976 11 346788899999999984322 22343211 123333332 255
Q ss_pred HHHHHHHHhhHhhccccccchhhhhHH-HHhhHhccCccccccccccc
Q psy10178 511 QVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVTKKSVANQHGIGALR 557 (655)
Q Consensus 511 ~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~k~sv~~~~~~~~l~ 557 (655)
+|..-.|..|..+..+ ..| .+++++.|-|. .|+..|.
T Consensus 182 ~v~~~A~~aLs~L~~~--------~~~~~~~vv~~g~i~--~Lv~LL~ 219 (296)
T 1xqr_A 182 KLKVKSAFLLQNLLVG--------HPEHKGTLCSMGMVQ--QLVALVR 219 (296)
T ss_dssp HHHHHHHHHHHHHHHH--------CGGGHHHHHHTTHHH--HHHHHHT
T ss_pred HHHHHHHHHHHHHHhC--------ChHHHHHHHHcCCHH--HHHHHHc
Confidence 5555555555555442 122 23345556555 4555554
No 28
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=94.93 E-value=0.63 Score=48.48 Aligned_cols=225 Identities=16% Similarity=0.211 Sum_probs=129.3
Q ss_pred hHHHHHHHhhccccccCC--cceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 354 PQRLALEALCKLCVTDNN--VDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 354 PqrlALEaL~KLsI~d~N--VdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
=|..|+.+|.++.-.+.| ++.++ -..++..|+++|....+...|+.|+..|.+++.++......+ .+.++
T Consensus 103 ~~~~A~~~L~~ll~~~~~~~~~~~~-------~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~-~~~g~ 174 (530)
T 1wa5_B 103 EQLSATVKFRQILSREHRPPIDVVI-------QAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVV-VDADA 174 (530)
T ss_dssp HHHHHHHHHHHHTCCSSSCSHHHHH-------HTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHH-HHTTC
T ss_pred HHHHHHHHHHHHhCCCCCccHHHHH-------HCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHH-HHCCC
Confidence 367899999998655433 33333 245677899998766577889999999999999887644433 34678
Q ss_pred HHHHHHHHHHH----HHHH-Hhhhhhcc--------------cCc----CCCCCCCCCCcHHHHHHHHHHHHHhccCC-C
Q psy10178 432 ISLLVAFIEQA----EQNA-LGVANQHG--------------IGA----LRDNPDSMGTSLDMLRRTARTLLHLSRHP-D 487 (655)
Q Consensus 432 I~~Ll~FLE~~----~~na-~~van~hg--------------i~a----L~~~Pe~~gtSv~MlRRAA~~L~~LAk~p-e 487 (655)
|..|+.+|.+. ++.+ ..+.|..+ +.. +++ .+..+.+.|+.+|..|++.. .
T Consensus 175 i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~------~~~~v~~~a~~~L~~L~~~~~~ 248 (530)
T 1wa5_B 175 VPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNS------NKPSLIRTATWTLSNLCRGKKP 248 (530)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGS------CCHHHHHHHHHHHHHHHCCSSS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhCCCCC
Confidence 99999999752 2222 23333322 111 121 34678899999999999875 3
Q ss_pred CCchhh--HHHHHHHHHHhhhhhhhHHHHHHHHhhHhhccccccchhhhhHH-HHhhHhccCccccccccccccCCCCcc
Q psy10178 488 NKPLFL--QQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASRE-KRKIVTKKSVANQHGIGALRDNPDSMG 564 (655)
Q Consensus 488 Nr~~fl--~~E~RLL~L~mS~ilDs~V~~ilA~vLfels~~l~~~~~~~~~e-~r~i~~k~sv~~~~~~~~l~d~~~~~~ 564 (655)
+..... ..=..|+.+..+ -|..|....+.+|..++... .+ ...+++.|-+. .++.+|.+.+...-
T Consensus 249 ~~~~~~~~~~l~~L~~lL~~--~d~~v~~~a~~~L~~L~~~~--------~~~~~~~~~~~~v~--~Lv~lL~~~~~~v~ 316 (530)
T 1wa5_B 249 QPDWSVVSQALPTLAKLIYS--MDTETLVDACWAISYLSDGP--------QEAIQAVIDVRIPK--RLVELLSHESTLVQ 316 (530)
T ss_dssp CCCHHHHGGGHHHHHHHTTC--CCHHHHHHHHHHHHHHHSSC--------HHHHHHHHHTTCHH--HHHHGGGCSCHHHH
T ss_pred CCcHHHHHhHHHHHHHHHcC--CCHHHHHHHHHHHHHHhCCC--------HHHHHHHHhcCcHH--HHHHHHCCCChhhH
Confidence 332221 111233443332 24566666677777665421 12 22335555554 67777775322110
Q ss_pred c-h-----------HHHHHHHHhhhhhccc---ccCCCCCCCcHHHHHHHHHHHHHHhcC
Q psy10178 565 T-S-----------LDMLRRVANQHGIGAL---RDNPDSMGTSLDMLRRTARTLLHLSRH 609 (655)
Q Consensus 565 ~-~-----------~~~~~~~~~~hg~~al---~~~p~~~gtSv~MmrRAA~~L~~lak~ 609 (655)
. + -..++.+.+..++..| ..++ ....-..|+.+|-.|+..
T Consensus 317 ~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~-----~~~vr~~A~~aL~~l~~~ 371 (530)
T 1wa5_B 317 TPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP-----KENIKKEACWTISNITAG 371 (530)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS-----CHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCC-----CHHHHHHHHHHHHHHHcC
Confidence 0 0 0122333334444332 2222 456777788888888874
No 29
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=94.46 E-value=0.59 Score=49.28 Aligned_cols=100 Identities=17% Similarity=0.227 Sum_probs=72.9
Q ss_pred ChHHHHHHHhhccccccCC--cceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccc
Q psy10178 353 SPQRLALEALCKLCVTDNN--VDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSP 430 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~N--VdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~ 430 (655)
.=|.-|...+-||--.+.| ++.++ -.+++..|+++|.....+..+.-|.-+|.|+|.++..-++.|. +.+
T Consensus 72 ~~q~~a~~~~rklls~e~~ppi~~ii-------~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv-~~G 143 (510)
T 3ul1_B 72 ESQLQATQAARKLLSREKQPPIDNII-------RAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVV-DGG 143 (510)
T ss_dssp HHHHHHHHHHHHHHTCSSCCCHHHHH-------HTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTT
T ss_pred HHHHHHHHHHHHHhcCCCCchHHHHH-------HCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHH-HCC
Confidence 4466777888887556666 33343 3456788999997777778888999999999999988776654 457
Q ss_pred cHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccC
Q psy10178 431 CISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH 485 (655)
Q Consensus 431 ~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~ 485 (655)
+|..|+.+|.+ + +.++.+.|+.+|..||..
T Consensus 144 aIp~Lv~lL~s--------------------~-----~~~v~e~A~~aL~nLa~d 173 (510)
T 3ul1_B 144 AIPAFISLLAS--------------------P-----HAHISEQAVWALGNIAGD 173 (510)
T ss_dssp HHHHHHHHTTC--------------------S-----CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHcC--------------------C-----CHHHHHHHHHHHHHHHhC
Confidence 89999888765 2 236667788888877653
No 30
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=93.56 E-value=0.6 Score=48.62 Aligned_cols=141 Identities=15% Similarity=0.191 Sum_probs=89.7
Q ss_pred HhhhhhHHhhhhccccccccCCCCCC-chhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhcccccc-CCcce
Q psy10178 297 NIRENVLVSLANISGHIDLDQYPEDI-SRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTD-NNVDL 374 (655)
Q Consensus 297 ~LReNaLVtLaNiagqLDLs~ypesI-~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d-~NVdl 374 (655)
.+|++|+-.|.||++.-+- +...+ ...++..|+.-.- ..| .+-++.|+.+|+.||... .+..
T Consensus 188 ~vr~~A~~aL~~l~~~~~~--~~~~~~~~~~l~~L~~ll~-----~~~--------~~v~~~a~~~L~~L~~~~~~~~~- 251 (530)
T 1wa5_B 188 EVKEQAIWALGNVAGDSTD--YRDYVLQCNAMEPILGLFN-----SNK--------PSLIRTATWTLSNLCRGKKPQPD- 251 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHH--HHHHHHHTTCHHHHHHGGG-----SCC--------HHHHHHHHHHHHHHHCCSSSCCC-
T ss_pred HHHHHHHHHHHHHhCCCcc--chHHHHHcCcHHHHHHHhc-----cCC--------HHHHHHHHHHHHHHhCCCCCCCc-
Confidence 6899999999999864210 00000 0112222222210 012 145788999999999775 4433
Q ss_pred eecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcc
Q psy10178 375 VIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHG 454 (655)
Q Consensus 375 iLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hg 454 (655)
+.....++..|+++|.. .+...|..|..+|.+++.++......+ .+.+.+..|+.+|.+
T Consensus 252 ------~~~~~~~l~~L~~lL~~-~d~~v~~~a~~~L~~L~~~~~~~~~~~-~~~~~v~~Lv~lL~~------------- 310 (530)
T 1wa5_B 252 ------WSVVSQALPTLAKLIYS-MDTETLVDACWAISYLSDGPQEAIQAV-IDVRIPKRLVELLSH------------- 310 (530)
T ss_dssp ------HHHHGGGHHHHHHHTTC-CCHHHHHHHHHHHHHHHSSCHHHHHHH-HHTTCHHHHHHGGGC-------------
T ss_pred ------HHHHHhHHHHHHHHHcC-CCHHHHHHHHHHHHHHhCCCHHHHHHH-HhcCcHHHHHHHHCC-------------
Confidence 33367788899999854 456789999999999998876644433 334667888777643
Q ss_pred cCcCCCCCCCCCCcHHHHHHHHHHHHHhccCC
Q psy10178 455 IGALRDNPDSMGTSLDMLRRTARTLLHLSRHP 486 (655)
Q Consensus 455 i~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~p 486 (655)
+ +..+...|+.+|..|+...
T Consensus 311 -------~-----~~~v~~~a~~~L~~l~~~~ 330 (530)
T 1wa5_B 311 -------E-----STLVQTPALRAVGNIVTGN 330 (530)
T ss_dssp -------S-----CHHHHHHHHHHHHHHTTSC
T ss_pred -------C-----ChhhHHHHHHHHHHHHcCC
Confidence 1 1356667888898888643
No 31
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.46 E-value=0.14 Score=50.57 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=80.4
Q ss_pred HHHHHHHhhccccc-cCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHH
Q psy10178 355 QRLALEALCKLCVT-DNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCIS 433 (655)
Q Consensus 355 qrlALEaL~KLsI~-d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~ 433 (655)
|..|+..|..||.. +.|-..|. -.+.+..|+++|.. .+...++.|+..|.||+.++..-...|+ +.++|.
T Consensus 27 q~~Aa~~l~~L~~~~~~~r~~I~-------~~G~Ip~LV~lL~s-~~~~vq~~Aa~aL~nLa~~~~~nk~~I~-~~GaI~ 97 (233)
T 3tt9_A 27 ISAAATFIQHECFQKSEARKRVN-------QLRGILKLLQLLKV-QNEDVQRAVCGALRNLVFEDNDNKLEVA-ELNGVP 97 (233)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHH-------HTTHHHHHHHGGGC-CCHHHHHHHHHHHHHHHTTCHHHHHHHH-HTTHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHH-------HcCCHHHHHHHHcC-CCHHHHHHHHHHHHHHHhCCHHHHHHHH-HcCCHH
Confidence 56788899998875 44555554 34556789999865 5678899999999999988776444455 458899
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCCCCCchhhH
Q psy10178 434 LLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQ 494 (655)
Q Consensus 434 ~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~peNr~~fl~ 494 (655)
.|+.+|... + +.++...|+.+|..|+.+++||..+..
T Consensus 98 ~Lv~lL~~~-------------------~-----~~~~~e~a~~aL~nLS~~~~~k~~i~~ 134 (233)
T 3tt9_A 98 RLLQVLKQT-------------------R-----DLETKKQITGLLWNLSSNDKLKNLMIT 134 (233)
T ss_dssp HHHHHHHHC-------------------C-----CHHHHHHHHHHHHHHHTSGGGHHHHHH
T ss_pred HHHHHHccC-------------------C-----CHHHHHHHHHHHHHHHcChhhHHHHHh
Confidence 999999751 1 235667788999999999999876654
No 32
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=92.91 E-value=0.29 Score=48.55 Aligned_cols=140 Identities=15% Similarity=0.150 Sum_probs=86.3
Q ss_pred HhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhcccccc-CCccee
Q psy10178 297 NIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTD-NNVDLV 375 (655)
Q Consensus 297 ~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d-~NVdli 375 (655)
.+|.+|+-.|+|++..-+-. ....+...++..|++-.- ..|+ .-+..|+.+|+.++-.. .+...+
T Consensus 165 ~v~~~a~~~L~~l~~~~~~~-~~~~~~~~~l~~L~~~l~-----~~~~--------~v~~~a~~~L~~l~~~~~~~~~~~ 230 (450)
T 2jdq_A 165 TMTRNAVWALSNLCRGKSPP-PEFAKVSPCLNVLSWLLF-----VSDT--------DVLADACWALSYLSDGPNDKIQAV 230 (450)
T ss_dssp HHHHHHHHHHHHHHCCSSSC-CCGGGTGGGHHHHHHHTT-----CCCH--------HHHHHHHHHHHHHTSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHHHHc-----cCCH--------HHHHHHHHHHHHHHCCCcHHHHHH
Confidence 68999999999998543100 011111233333333211 1231 34678999999998643 233222
Q ss_pred ecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhccc
Q psy10178 376 IATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGI 455 (655)
Q Consensus 376 LsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi 455 (655)
+ ..+++..|+++|. +.+...|+.|+.+|.+++.++......+. +.+.+..|+.+|.+
T Consensus 231 ~-------~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~-~~~~l~~L~~ll~~-------------- 287 (450)
T 2jdq_A 231 I-------DAGVCRRLVELLM-HNDYKVVSPALRAVGNIVTGDDIQTQVIL-NCSALQSLLHLLSS-------------- 287 (450)
T ss_dssp H-------HTTTHHHHHHHTT-CSCHHHHHHHHHHHHHHTTSCHHHHHHHH-TTTHHHHHHHHTTC--------------
T ss_pred H-------HcCcHHHHHHHHC-CCchhHHHHHHHHHHHHhhCChHHHHHHH-HCccHHHHHHHHcC--------------
Confidence 2 2356778888875 55678899999999999998877554433 33556666665543
Q ss_pred CcCCCCCCCCCCcHHHHHHHHHHHHHhcc
Q psy10178 456 GALRDNPDSMGTSLDMLRRTARTLLHLSR 484 (655)
Q Consensus 456 ~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk 484 (655)
+ +..+.+.|+.+|..|+.
T Consensus 288 ------~-----~~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 288 ------P-----KESIKKEACWTISNITA 305 (450)
T ss_dssp ------S-----SHHHHHHHHHHHHHHTT
T ss_pred ------C-----CHHHHHHHHHHHHHHHc
Confidence 2 13566778888888886
No 33
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=92.80 E-value=0.53 Score=54.26 Aligned_cols=178 Identities=15% Similarity=0.186 Sum_probs=119.3
Q ss_pred hhhhHHhhhhcccccc-----cc--CCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCC
Q psy10178 299 RENVLVSLANISGHID-----LD--QYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNN 371 (655)
Q Consensus 299 ReNaLVtLaNiagqLD-----Ls--~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~N 371 (655)
+-+|+..|.|||..=| +. +..+.-.+|.|+.+|.-. +..=||.|.|++|-|+-++..
T Consensus 576 ~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~----------------n~~VrrAA~elI~NL~~~~e~ 639 (778)
T 3opb_A 576 NYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDE----------------NVPLQRSTLELISNMMSHPLT 639 (778)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCS----------------SHHHHHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCC----------------CHHHHHHHHHHHHHHhCCcHH
Confidence 5588999999987531 11 111101234455544320 113589999999999998877
Q ss_pred c--ceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhh
Q psy10178 372 V--DLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGV 449 (655)
Q Consensus 372 V--dliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~v 449 (655)
+ .+.-.-.| |--+=++.|+.|+ ..++...|..|..+|.|++.++..+|+.|......|..|++.++.
T Consensus 640 i~~k~~~~~~~--~~~~rL~lLV~Ll-~s~D~~~r~AAagALAnLts~~~~ia~~ll~~~~gi~~Ll~lL~~-------- 708 (778)
T 3opb_A 640 IAAKFFNLENP--QSLRNFNILVKLL-QLSDVESQRAVAAIFANIATTIPLIAKELLTKKELIENAIQVFAD-------- 708 (778)
T ss_dssp TGGGTSCCSSH--HHHHHHHHHHHGG-GCSCHHHHHHHHHHHHHHHHHCHHHHHHHTTCHHHHHHHHHHHHH--------
T ss_pred HHHHHHhhcCc--hhhccHHHHHHHH-cCCCHHHHHHHHHHHHHhcCCChHHHHHHHHccccHHHHHHHHhc--------
Confidence 4 34322111 2222366888887 457778899999999999999999999988888889999999998
Q ss_pred hhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhcc-CCCCC-----chhh---HHHHHHHHHHhhhhhhhHHHHHHHH
Q psy10178 450 ANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSR-HPDNK-----PLFL---QQEQRLLALVMSQILDQQVAAIISR 518 (655)
Q Consensus 450 an~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk-~peNr-----~~fl---~~E~RLL~L~mS~ilDs~V~~ilA~ 518 (655)
|+ ...++..|++..|..|+. .+++. ..|+ ++...|..+.+++-.|..+...|=.
T Consensus 709 --~~-------------~~~~l~~R~~~~l~NL~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lk~~~~~~e~~~~~~~ 771 (778)
T 3opb_A 709 --QI-------------DDIELRQRLLMLFFGLFEVIPDNGTNEVYPLLQENQKLKDALNMSLKRGDSGPEFSAAIPV 771 (778)
T ss_dssp --TT-------------TCHHHHHHHHHHHHHHHTTCCSTTTTSCCHHHHSCHHHHHHHHHHHSSSSSCSSTTSHHHH
T ss_pred --cC-------------CCHHHHHHHHHHHHHHHHhhccCCChHHHHHHhcChHHHHHHHHHHhCCCchHHHHHHHHH
Confidence 21 134889999999999995 44443 2333 4567777777777666655554433
No 34
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=92.28 E-value=0.19 Score=49.63 Aligned_cols=155 Identities=19% Similarity=0.131 Sum_probs=98.8
Q ss_pred ChHHHHHHHhhcccc-ccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 353 SPQRLALEALCKLCV-TDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 353 SPqrlALEaL~KLsI-~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
.=|+.|..+|.-|+. ++.|-..|.. .+-+..|+++|....+...+|.|+.+|.||+..+.. ...|.. .+
T Consensus 67 ~vq~~Aa~aL~nLa~~~~~nk~~I~~-------~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~~~~~-k~~i~~--~~ 136 (233)
T 3tt9_A 67 DVQRAVCGALRNLVFEDNDNKLEVAE-------LNGVPRLLQVLKQTRDLETKKQITGLLWNLSSNDKL-KNLMIT--EA 136 (233)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHH-------TTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTSGGG-HHHHHH--HH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHH-------cCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcChhh-HHHHHh--cc
Confidence 357899999999998 5788888773 345567888886555667899999999999976654 333432 24
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccCcCCCCCC-CCCCcHHHHHHHHHHHHHhccCC-CCCchhhHHH---HHHHHHHhhh
Q psy10178 432 ISLLVAFIEQAEQNALGVANQHGIGALRDNPD-SMGTSLDMLRRTARTLLHLSRHP-DNKPLFLQQE---QRLLALVMSQ 506 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe-~~gtSv~MlRRAA~~L~~LAk~p-eNr~~fl~~E---~RLL~L~mS~ 506 (655)
|.-|+..|-.. ..|+.+- +++. .--...++.+.|+.+|..|+... ++|..+..++ ..|..+..+.
T Consensus 137 i~~Lv~ll~~p---------~sG~~~~-~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~ 206 (233)
T 3tt9_A 137 LLTLTENIIIP---------FSGWPEG-DYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
T ss_dssp HHHHCCCCCHH---------HHCCCGG-GCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc---------ccCCccc-ccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhh
Confidence 55555433221 2344211 1110 11134589999999999999854 7887776553 3556666665
Q ss_pred hhh----hHHHHHHHHhhHhhcccc
Q psy10178 507 ILD----QQVAAIISRVLYQTRPDL 527 (655)
Q Consensus 507 ilD----s~V~~ilA~vLfels~~l 527 (655)
+.+ ++...--..+|+.|+-++
T Consensus 207 ~~~~~~~~k~~En~v~~L~nLs~~~ 231 (233)
T 3tt9_A 207 IADYQPDDKATENCVCILHNLSYQL 231 (233)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHCCCC
T ss_pred hhcccchhHHHHHHHHHHHHHHhhh
Confidence 543 334444556677766554
No 35
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=91.71 E-value=0.38 Score=50.72 Aligned_cols=105 Identities=17% Similarity=0.214 Sum_probs=72.7
Q ss_pred HHHHHHHhhccccccCC--cceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 355 QRLALEALCKLCVTDNN--VDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 355 qrlALEaL~KLsI~d~N--VdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
|.-|+..+.|+--.+.| ++.++ -.+++..|+++|.....+..+.-|.-+|.|+|.++..-+..|. +.++|
T Consensus 93 q~~a~~~~rklLs~~~~~~i~~ii-------~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv-~~Gai 164 (529)
T 3tpo_A 93 QLQATQAARKLLSREKQPPIDNII-------RAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVV-DGGAI 164 (529)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHH-------HTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHH-HTTHH
T ss_pred HHHHHHHHHHHHcCCCCchHHHHH-------HCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHH-HCCCH
Confidence 45566777776444444 23333 3467788999997777778888899999999999888665544 46789
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCC-CCCchh
Q psy10178 433 SLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHP-DNKPLF 492 (655)
Q Consensus 433 ~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~p-eNr~~f 492 (655)
..|+.+|.. + +.++...|+.+|..||... ++|..+
T Consensus 165 p~Lv~LL~s--------------------~-----~~~v~e~A~~aL~nLa~~~~~~r~~i 200 (529)
T 3tpo_A 165 PAFISLLAS--------------------P-----HAHISEQAVWALGNIAGAGSAFRDLV 200 (529)
T ss_dssp HHHHHHTTC--------------------S-----CHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHcC--------------------C-----CHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 999887754 2 2356677888888888753 444443
No 36
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=91.64 E-value=4.3 Score=46.96 Aligned_cols=77 Identities=17% Similarity=0.197 Sum_probs=61.7
Q ss_pred HHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHH
Q psy10178 355 QRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISL 434 (655)
Q Consensus 355 qrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~ 434 (655)
+.+|+-.|||+.-.... .-..+++|...+.++|..... ..|+.||-.|.|+.- +..+...++...+++..
T Consensus 311 r~lAavvL~KL~~~~~~--------~~~si~~La~~~~~~L~~~~~-~~~~~AvEgLaYLSl-~~~VKe~L~~d~~~L~~ 380 (778)
T 3opb_A 311 QIYSALVLVKTWSFTKL--------TCINLKQLSEIFINAISRRIV-PKVEMSVEALAYLSL-KASVKIMIRSNESFTEI 380 (778)
T ss_dssp HHHHHHHHHHHTGGGTC--------TTCCHHHHHHHHHHHTTTCCH-HHHHHHHHHHHHHTT-SSHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCC--------CcCcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHhC-CHHHHHHHHhCHHHHHH
Confidence 67999999998765542 223578999999999987654 349999999999976 55557778888888999
Q ss_pred HHHHHHH
Q psy10178 435 LVAFIEQ 441 (655)
Q Consensus 435 Ll~FLE~ 441 (655)
|+.+++.
T Consensus 381 Lv~llk~ 387 (778)
T 3opb_A 381 LLTMIKS 387 (778)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9999985
No 37
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=87.78 E-value=0.67 Score=53.45 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=80.1
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
.-|+.|+++||.++..+.+...++.. .+.+..|+.|+.. .+...|+.|..+|+|++.++...++.|....++|
T Consensus 638 ~Vq~~A~~~L~NLa~~~~~~~~~v~~------~g~l~~Lv~LL~s-~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I 710 (810)
T 3now_A 638 YLTRAAAQCLCNLVMSEDVIKMFEGN------NDRVKFLALLCED-EDEETATACAGALAIITSVSVKCCEKILAIASWL 710 (810)
T ss_dssp THHHHHHHHHHHHTTSHHHHHHHHSS------SSHHHHHHHGGGC-SSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHH
T ss_pred HHHHHHHHHHHHHhCChHHHHHHHhc------cCcHHHHHHHhcC-CCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCH
Confidence 57899999999999988776665421 1456789999866 4557799999999999998888788877756779
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccC
Q psy10178 433 SLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRH 485 (655)
Q Consensus 433 ~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~ 485 (655)
..|+.+|.. + +.++-++|+.+|..|++.
T Consensus 711 ~~Lv~LL~s--------------------~-----d~~vq~~A~~aL~NL~~~ 738 (810)
T 3now_A 711 DILHTLIAN--------------------P-----SPAVQHRGIVIILNMINA 738 (810)
T ss_dssp HHHHHHHTC--------------------S-----SHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCC--------------------C-----CHHHHHHHHHHHHHHHhC
Confidence 999988865 2 347788899999999884
No 38
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=87.30 E-value=1.3 Score=44.50 Aligned_cols=189 Identities=15% Similarity=0.098 Sum_probs=113.5
Q ss_pred hhhhHHHHHHHhhh-------------------hhHHhhhhccccccccC-C-CCCCchhhhhhhhhcccccccCCCCCC
Q psy10178 287 ESEWWWDYMENIRE-------------------NVLVSLANISGHIDLDQ-Y-PEDISRPILDGLLHWAVCPAAQGQDPF 345 (655)
Q Consensus 287 ~~~Wwwd~l~~LRe-------------------NaLVtLaNiagqLDLs~-y-pesI~~PILdGLLHWaVCpsA~aqDPf 345 (655)
..++..+++..|.. .||..|.++.-+.|... | .-+...+++..+|.. .+|
T Consensus 26 ~~~~mk~~l~vl~~~~~~~~~~~~~~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s--------~~~- 96 (296)
T 1xqr_A 26 EVEQMKSCLRVLSQPMPPTAGEAEQAADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEA--------GAA- 96 (296)
T ss_dssp HHHHHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTC--------SSH-
T ss_pred HHHHHHHHHHHHhCCCcccccccccCCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcC--------CCH-
Confidence 45666666666554 57888887776665321 1 111122333324432 111
Q ss_pred CCCCCCCChHHHHHHHhhccccc-cCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHH
Q psy10178 346 PSSSCNLSPQRLALEALCKLCVT-DNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRT 424 (655)
Q Consensus 346 ps~~~~lSPqrlALEaL~KLsI~-d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~ 424 (655)
.=+..|+.+|+.++-. +.+-+.++. .+.+..|+++|....+...|+.|+-+|+|++.++......
T Consensus 97 -------~vr~~Aa~~Lg~ia~~n~~~~~~vv~-------~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~ 162 (296)
T 1xqr_A 97 -------GLRWRAAQLIGTCSQNVAAIQEQVLG-------LGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQ 162 (296)
T ss_dssp -------HHHHHHHHHHHHHHTTCHHHHHHHHH-------TTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred -------HHHHHHHHHHHHHHhCCHHHHHHHHH-------CCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 2467899999998753 334445552 2456677888765445677999999999999988775444
Q ss_pred HhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhccCC-CCCchhhH--HHHHHHH
Q psy10178 425 IALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHP-DNKPLFLQ--QEQRLLA 501 (655)
Q Consensus 425 iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk~p-eNr~~fl~--~E~RLL~ 501 (655)
+.. .+.+..|+.+|.. + +..+.++|+.+|-.|+... +.+..+.. .=.+|..
T Consensus 163 ~~~-~ggi~~L~~lL~~--------------------~-----d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~ 216 (296)
T 1xqr_A 163 FLR-LDGFSVLMRAMQQ--------------------Q-----VQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVA 216 (296)
T ss_dssp HHH-TTHHHHHHHHHHS--------------------S-----CHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHH
T ss_pred HHH-CCCHHHHHHHHcC--------------------C-----CHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHH
Confidence 443 3568888888754 2 2367888999999998763 33333332 2233444
Q ss_pred HHhhhhhhhHHHHHHHHhhHhhccc
Q psy10178 502 LVMSQILDQQVAAIISRVLYQTRPD 526 (655)
Q Consensus 502 L~mS~ilDs~V~~ilA~vLfels~~ 526 (655)
|-.+. |..|....++.|..|...
T Consensus 217 LL~~~--d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 217 LVRTE--HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHTSC--CSTHHHHHHHHHHHHHTT
T ss_pred HHcCC--ChhHHHHHHHHHHHHHhC
Confidence 43332 556666666666666543
No 39
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=81.48 E-value=0.49 Score=51.12 Aligned_cols=50 Identities=20% Similarity=0.248 Sum_probs=40.2
Q ss_pred ccCCCCCCCCccccc-CCCcccccccccCCcccccccccc----ccccccccCchhhhh
Q psy10178 72 YYDETAPSKPNTIVN-SDVHVVKSEDKANGMTTTKPEETS----VKIENNKEGESTVKK 125 (655)
Q Consensus 72 k~d~~~ps~P~k~fn-s~~~Vv~~e~k~~g~~~~e~~~tK----~~l~~~~~~~s~~~k 125 (655)
++..++|+.|+|.++ .+++ ..++.||+|.+.++.+ +++.++.+.|++..+
T Consensus 5 ~K~~~~P~~klK~l~W~ki~----~~~~~~TiW~~~~~~~~~~~ld~~~lE~lF~~~~~ 59 (483)
T 2j1d_G 5 KKSIPQPTNALKSFNWSKLP----ENKLEGTVWTEIDDTKVFKILDLEDLERTFSAYQR 59 (483)
T ss_dssp -CCCCCCSSCBCCCCCCCCC----GGGCSSSGGGGCCGGGHHHHSCHHHHHHHTBSBC-
T ss_pred CCCCCCCCCCCCCcCceECC----cccccCCccCcCCchhhccccCHHHHHHHHhhhcc
Confidence 467889999999998 7776 6788999999999985 677777788887644
No 40
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=71.86 E-value=5.3 Score=45.36 Aligned_cols=164 Identities=18% Similarity=0.248 Sum_probs=102.1
Q ss_pred HhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCcceee
Q psy10178 297 NIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLVI 376 (655)
Q Consensus 297 ~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdliL 376 (655)
+=|-+|+-.|--+| ..|+++|...-+.+|+++-- -+..|. ---+.+||+|+-+-..+..-+---
T Consensus 37 eDRR~Av~~Lk~~s-----k~y~~~Vg~~~l~~li~~L~---~d~~D~--------e~v~~~LetL~~l~~~~~~~~~~~ 100 (651)
T 3grl_A 37 DDRRNAVRALKSLS-----KKYRLEVGIQAMEHLIHVLQ---TDRSDS--------EIIGYALDTLYNIISNDEEEEVEE 100 (651)
T ss_dssp HHHHHHHHHHHHTT-----TTTTTHHHHHTHHHHHHHHH---SCTTCH--------HHHHHHHHHHHHHHCCC-------
T ss_pred hHHHHHHHHHHHHH-----HHhHHHhhhhhHHHHHHHHh---cccccH--------HHHHHHHHHHHHHhCCCCcccccc
Confidence 34666776666665 67999886544444444421 112231 234789999976543333211000
Q ss_pred cCCC------------hhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChh-hHHHHhhccccHHHHHHHHHHHH
Q psy10178 377 ATPP------------YARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSA-MSRTIALQSPCISLLVAFIEQAE 443 (655)
Q Consensus 377 sTpP------------fsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~-~~r~iA~qk~~I~~Ll~FLE~~~ 443 (655)
..++ |.+-+.-+..|+.+|.. .+-..|-.|+.+|..|+..... .=.+|-.....|+.|+++|.+.+
T Consensus 101 ~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~-~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~r 179 (651)
T 3grl_A 101 NSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEE-FDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSR 179 (651)
T ss_dssp -------CHHHHHHHHHHHSTHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSS
T ss_pred cccccchHHHHHHHHHHHcCCccHHHHHHHhcC-ccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCch
Confidence 0000 22334557788999854 4556699999999999999888 44446667788999999998721
Q ss_pred HHHHhhhhhcccCcCCCCCCCCCCcHHHHHH-HHHHHHHhccCCCCCchhhHHHHHHHHHH
Q psy10178 444 QNALGVANQHGIGALRDNPDSMGTSLDMLRR-TARTLLHLSRHPDNKPLFLQQEQRLLALV 503 (655)
Q Consensus 444 ~na~~van~hgi~aL~~~Pe~~gtSv~MlRR-AA~~L~~LAk~peNr~~fl~~E~RLL~L~ 503 (655)
+++|- |...|-.|++...+-.-++.||+.+.-|.
T Consensus 180 --------------------------E~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf 214 (651)
T 3grl_A 180 --------------------------EVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLL 214 (651)
T ss_dssp --------------------------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred --------------------------HHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHH
Confidence 45554 66677788887777777888886655543
No 41
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=65.03 E-value=7.3 Score=43.13 Aligned_cols=161 Identities=15% Similarity=0.106 Sum_probs=89.6
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHH-HHHhhcccchhHHHHHHHHHHHHHhhcC-hhhHHHHhhccc
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYV-LTRFLCKNEDQVLREFGVNLLHYLAAAD-SAMSRTIALQSP 430 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~-LvrLL~~~~~~v~RE~AvvlL~nLa~~d-~~~~r~iA~qk~ 430 (655)
.=|..|+-+|+-|+-.+.+..+++ .++++.. |.++|.+... ..|+-|..+|.||+... .++|-.+.. ++
T Consensus 49 ~~r~~A~~al~~l~~~~~~~~l~~-------~~~~v~~ll~~lL~D~~~-~Vr~~A~gaLrnL~~~~g~d~~~~l~~-~~ 119 (684)
T 4gmo_A 49 KSRTTAAGAIANIVQDAKCRKLLL-------REQVVHIVLTETLTDNNI-DSRAAGWEILKVLAQEEEADFCVHLYR-LD 119 (684)
T ss_dssp SHHHHHHHHHHHHTTSHHHHHHHH-------HTTHHHHHHHTTTTCSCH-HHHHHHHHHHHHHHHHSCHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHH-------HcCCHHHHHHHHcCCCCH-HHHHHHHHHHHHHHhhcCchHHHHHHH-cC
Confidence 447789999999997777777766 6677765 5666766655 55999999999999864 565544443 45
Q ss_pred cHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCc-HHHHHHHHHHHHHhccCCCC-CchhhHH--HHHHHHHHh-h
Q psy10178 431 CISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTS-LDMLRRTARTLLHLSRHPDN-KPLFLQQ--EQRLLALVM-S 505 (655)
Q Consensus 431 ~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtS-v~MlRRAA~~L~~LAk~peN-r~~fl~~--E~RLL~L~m-S 505 (655)
.+..|+.+++...+.-.... .+...+ ++..-.. .++.--+..+|.+|+...+. ...+... -.+|+.+.. .
T Consensus 120 il~~L~~~l~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l~~~L~~~ 194 (684)
T 4gmo_A 120 VLTAIEHAAKAVLETLTTSE--PPFSKL---LKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRLLFRLISA 194 (684)
T ss_dssp HHHHHHHHHHHHHHHHHCBT--TBGGGS---CHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhhHHHHhhhc--cccccc---cHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHHHHHHHhc
Confidence 67788888887654332211 111111 0000000 11222344566666653332 1111111 112233222 2
Q ss_pred hhhhhHHHHHHHHhhHhhcccc
Q psy10178 506 QILDQQVAAIISRVLYQTRPDL 527 (655)
Q Consensus 506 ~ilDs~V~~ilA~vLfels~~l 527 (655)
.+....|....++.||.++++-
T Consensus 195 ~~~~~~v~~~a~~~L~~ls~dn 216 (684)
T 4gmo_A 195 DIAPQDIYEEAISCLTTLSEDN 216 (684)
T ss_dssp CCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCcHHHHHHHHHHHHHHhccC
Confidence 2233467788888888887753
No 42
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=63.16 E-value=1.7 Score=44.25 Aligned_cols=7 Identities=43% Similarity=0.567 Sum_probs=3.2
Q ss_pred ccccCCC
Q psy10178 261 RATKTRN 267 (655)
Q Consensus 261 r~~~~~~ 267 (655)
|-.|+.|
T Consensus 185 rDlkp~N 191 (400)
T 1nxk_A 185 RDVKPEN 191 (400)
T ss_dssp CCCCGGG
T ss_pred cCcCcce
Confidence 4444444
No 43
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=60.54 E-value=1.9 Score=44.00 Aligned_cols=8 Identities=25% Similarity=0.638 Sum_probs=3.2
Q ss_pred hccCCCCC
Q psy10178 482 LSRHPDNK 489 (655)
Q Consensus 482 LAk~peNr 489 (655)
|...|+.|
T Consensus 306 L~~dP~~R 313 (400)
T 1nxk_A 306 LKTEPTQR 313 (400)
T ss_dssp SCSSGGGS
T ss_pred CCCChhHC
Confidence 33344444
No 44
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=60.53 E-value=12 Score=41.39 Aligned_cols=58 Identities=21% Similarity=0.174 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCCCCCcHHHHHHHHHHHHHhcc
Q psy10178 405 EFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSR 484 (655)
Q Consensus 405 E~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~~gtSv~MlRRAA~~L~~LAk 484 (655)
+-++.+|.+||+++..+-..|... +.+..|+.+|.... -++.++..-|+..|..|+.
T Consensus 158 ~~~l~lL~~L~e~s~~~~~~v~~~-~~l~~l~~~L~~~~----------------------~~~~~v~~~a~~~L~~ls~ 214 (684)
T 4gmo_A 158 GSLLVLIGLLALARDEIHEAVATK-QTILRLLFRLISAD----------------------IAPQDIYEEAISCLTTLSE 214 (684)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHTC-HHHHHHHHHHHHHC----------------------CSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHhc-ccHHHHHHHHHhcC----------------------CCcHHHHHHHHHHHHHHhc
Confidence 335578899999888765555543 55778888776521 1223566667777777765
Q ss_pred C
Q psy10178 485 H 485 (655)
Q Consensus 485 ~ 485 (655)
.
T Consensus 215 d 215 (684)
T 4gmo_A 215 D 215 (684)
T ss_dssp T
T ss_pred c
Confidence 3
No 45
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=54.48 E-value=21 Score=38.39 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=52.2
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
+=++.|+|+|.+++ +++|++ .++..|..++. ..+...|..++..+.++|..-...+ .|++
T Consensus 333 ~Ir~~al~~L~~l~-~~~nv~------------~iv~~L~~~l~-~~d~~~r~~~v~aI~~la~~~~~~~------~~~v 392 (591)
T 2vgl_B 333 YVKLEKLDIMIRLA-SQANIA------------QVLAELKEYAT-EVDVDFVRKAVRAIGRCAIKVEQSA------ERCV 392 (591)
T ss_dssp HHHHHHHHHHHHTC-CSSTHH------------HHHHHHHHHTT-SSCHHHHHHHHHHHHHHHTTCHHHH------HHHH
T ss_pred HHHHHHHHHHHHHC-ChhhHH------------HHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHhChhHH------HHHH
Confidence 44689999999976 777865 45556667764 3466789999999999998765433 5889
Q ss_pred HHHHHHHHH
Q psy10178 433 SLLVAFIEQ 441 (655)
Q Consensus 433 ~~Ll~FLE~ 441 (655)
..|+++|++
T Consensus 393 ~~Ll~ll~~ 401 (591)
T 2vgl_B 393 STLLDLIQT 401 (591)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcc
Confidence 999999976
No 46
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=53.51 E-value=2e+02 Score=31.78 Aligned_cols=312 Identities=15% Similarity=0.125 Sum_probs=0.0
Q ss_pred HHhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhccccc--------ccCCCCCCCCCC-CCCChHHHHHHHhhccc
Q psy10178 296 ENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCP--------AAQGQDPFPSSS-CNLSPQRLALEALCKLC 366 (655)
Q Consensus 296 ~~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCp--------sA~aqDPfps~~-~~lSPqrlALEaL~KLs 366 (655)
+.+|.+|+..+.+++.......+-......++.-++...... .....|..-... ...+.++.|.++|.+++
T Consensus 270 ~~vr~~a~e~l~~l~~~~~~~~~~~~~~~~l~p~ll~~l~~~e~d~~~~~~d~~ed~~~dd~~~~~~vr~~a~~~L~~la 349 (852)
T 4fdd_A 270 ENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEGGSGGDDTISDWNLRKCSAAALDVLA 349 (852)
T ss_dssp HHHHHHHHHHHHHHTTSTTHHHHHTTTHHHHHHHHHHHTSCCHHHHHHHHC------------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHcCCcHhHHHHhcCCcccccccccccccchHHHHHHHHHHHHH
Q ss_pred cccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHH
Q psy10178 367 VTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNA 446 (655)
Q Consensus 367 I~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na 446 (655)
-.-. +.++ +.++..|.+++... +...|+.|+-.|.+++++-.. ..-..-...+..|+.++.+
T Consensus 350 ~~~~--~~~~--------~~l~~~l~~~l~~~-~~~~R~aa~~alg~i~~~~~~--~~~~~l~~~l~~l~~~l~d----- 411 (852)
T 4fdd_A 350 NVYR--DELL--------PHILPLLKELLFHH-EWVVKESGILVLGAIAEGCMQ--GMIPYLPELIPHLIQCLSD----- 411 (852)
T ss_dssp HHHG--GGGH--------HHHHHHHHHHHTCS-SHHHHHHHHHHHHHTTTTTHH--HHGGGHHHHHHHHHHHTTC-----
T ss_pred Hhcc--HHHH--------HHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHcCC-----
Q ss_pred HhhhhhcccCcCCCCCCCCCCcHHHHHH-HHHHHHHhccCCCCCchhhHHHHHHHHHHhhhhhhh--HHHHHHHHhhHhh
Q psy10178 447 LGVANQHGIGALRDNPDSMGTSLDMLRR-TARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQ--QVAAIISRVLYQT 523 (655)
Q Consensus 447 ~~van~hgi~aL~~~Pe~~gtSv~MlRR-AA~~L~~LAk~peNr~~fl~~E~RLL~L~mS~ilDs--~V~~ilA~vLfel 523 (655)
++ ..+|. |+.+|..++..-.... ..+|-..++......+.|+ .|..-.+..|-.+
T Consensus 412 ---------------~~------~~Vr~~a~~~l~~l~~~~~~~~-~~~~~~~ll~~L~~~L~d~~~~vr~~a~~aL~~l 469 (852)
T 4fdd_A 412 ---------------KK------ALVRSITCWTLSRYAHWVVSQP-PDTYLKPLMTELLKRILDSNKRVQEAACSAFATL 469 (852)
T ss_dssp ---------------SS------HHHHHHHHHHHHHTHHHHHHSC-TTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred ---------------CC------HHHHHHHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Q ss_pred ccccccchhhhhHH--------------HHhhHhccCccccccc------------------------cccccCCCCccc
Q psy10178 524 RPDLYQNSEHASRE--------------KRKIVTKKSVANQHGI------------------------GALRDNPDSMGT 565 (655)
Q Consensus 524 s~~l~~~~~~~~~e--------------~r~i~~k~sv~~~~~~------------------------~~l~d~~~~~~~ 565 (655)
.+.....-.....+ +...+--..+| +++ ..+.|++..+-.
T Consensus 470 ~~~~~~~l~~~l~~ll~~L~~~l~~~~~~~~~~~~~ai~--~l~~~~~~~~~~~~~~~~l~p~l~~~~~~l~d~~~~~~~ 547 (852)
T 4fdd_A 470 EEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIG--TLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFP 547 (852)
T ss_dssp HHHHGGGGGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHH--HHHHHHGGGGCCHHHHHHHHHHHHHHHHHSCTTCTTHHH
T ss_pred HHHhhHhhHhHHHHHHHHHHHHHHHhChHHHHHHHHHHH--HHHHHhhhhhccHHHHHHHHHHHHHHHHhcccccHHHHH
Q ss_pred hHHHHHHHHhhhhhccc------------------------ccCC-CCCCCcHHHHHHHHHHHHHHhcCCCCchhhHHH-
Q psy10178 566 SLDMLRRVANQHGIGAL------------------------RDNP-DSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQ- 619 (655)
Q Consensus 566 ~~~~~~~~~~~hg~~al------------------------~~~p-~~~gtSv~MmrRAA~~L~~lak~~enr~~f~~~- 619 (655)
.+...-+++..-|.... ..+| .+.....+....|-.+|-.+++.=+ ..|..|
T Consensus 548 ~~~~l~~i~~~~g~~~~~~~~~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~d~~~~~~~l~~l~~l~~~l~--~~~~~~~ 625 (852)
T 4fdd_A 548 LLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLG--GNIEQLV 625 (852)
T ss_dssp HHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHG--GGGHHHH
T ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCCCcchHHHHHHHHHHHHHHHHh--HhHHHHh
Q ss_pred -HHHHHHHHHHHhhh------HHHHHHHHHHHHhhCccc
Q psy10178 620 -EQRLLALVMSQILD------QQVAAIISRVLYQTRPDL 651 (655)
Q Consensus 620 -e~RLL~l~mS~ild------~~Va~~i~~vLf~~~~~~ 651 (655)
+..++.+.+.-+-| +.....++++...++..|
T Consensus 626 ~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~~~~~~~~ 664 (852)
T 4fdd_A 626 ARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHV 664 (852)
T ss_dssp HTCCHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGT
T ss_pred cCCcHHHHHHHHhCCCChhHHHHHHHHHHHHHHHhhHHH
No 47
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=52.35 E-value=2.9 Score=44.29 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=35.3
Q ss_pred CCCCCCCccccc-CCCcccccccccCCcccccccccc----ccccccccCchhh
Q psy10178 75 ETAPSKPNTIVN-SDVHVVKSEDKANGMTTTKPEETS----VKIENNKEGESTV 123 (655)
Q Consensus 75 ~~~ps~P~k~fn-s~~~Vv~~e~k~~g~~~~e~~~tK----~~l~~~~~~~s~~ 123 (655)
..+|...+|.|| .+++ .+++.||+|.+.++.+ ++..++.+.|+++
T Consensus 12 ~~~~k~kmk~l~W~kl~----~~~i~~Tiw~~~~~~~~~~~ld~~~~E~lF~~k 61 (402)
T 4eah_A 12 PIKTKFRLPVFNWTALK----PNQINGTVFSELDDEKILEDLDLDRFEELFKTK 61 (402)
T ss_dssp CCCCSSCCCCCCCCEEC----HHHHTTSTTSSCCTTSCSSTTTHHHHHHHSCCC
T ss_pred CCCCCCCCCCcCceeCC----hHhccCccccCCchhhhccccCHHHHHHHHhhc
Confidence 446788999997 7766 7799999999999886 4556666678764
No 48
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=48.47 E-value=1e+02 Score=33.10 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=62.7
Q ss_pred HHhhhhhHHhhhhccccccccCCCCCCchhhhhhhhhcccccccCCCCCCCCCCCCCChHHHHHHHhhccccccCCccee
Q psy10178 296 ENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTDNNVDLV 375 (655)
Q Consensus 296 ~~LReNaLVtLaNiagqLDLs~ypesI~~PILdGLLHWaVCpsA~aqDPfps~~~~lSPqrlALEaL~KLsI~d~NVdli 375 (655)
...|..||-+++|+. ...+...++..+..... ..|| .=|+-|+.+|.|++-.. -+.+
T Consensus 100 ~~ir~~AL~~L~~i~--------~~~~~~~l~~~l~~~L~-----d~~~--------~VRk~A~~al~~i~~~~--p~~~ 156 (591)
T 2vgl_B 100 PLIRALAVRTMGCIR--------VDKITEYLCEPLRKCLK-----DEDP--------YVRKTAAVCVAKLHDIN--AQMV 156 (591)
T ss_dssp HHHHHHHHHHHHTCC--------SGGGHHHHHHHHHHHSS-----CSCH--------HHHHHHHHHHHHHHHSS--CCCH
T ss_pred HHHHHHHHHHHHcCC--------hHHHHHHHHHHHHHHcC-----CCCh--------HHHHHHHHHHHHHHhhC--hhhc
Confidence 378999999999996 23344444444433321 1122 24688999999987532 2211
Q ss_pred ecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcCh
Q psy10178 376 IATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADS 419 (655)
Q Consensus 376 LsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~ 419 (655)
+.+.++..|.++|.+ .++..|.-|+.+|..+++.+.
T Consensus 157 -------~~~~~~~~l~~lL~d-~d~~V~~~A~~aL~~i~~~~~ 192 (591)
T 2vgl_B 157 -------EDQGFLDSLRDLIAD-SNPMVVANAVAALSEISESHP 192 (591)
T ss_dssp -------HHHHHHHHHHHTTSC-SCHHHHHHHHHHHHHHTTSCC
T ss_pred -------ccccHHHHHHHHhCC-CChhHHHHHHHHHHHHHhhCC
Confidence 234788999999864 566779999999999998775
No 49
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=46.13 E-value=12 Score=41.02 Aligned_cols=70 Identities=20% Similarity=0.238 Sum_probs=46.6
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
|=++.|||+|.+++ +++|++.|+ ..|.+++. ..+...|..++..+..+|+.-. ....|+|
T Consensus 384 ~Ir~~aL~lL~~l~-~~~Nv~~Iv------------~eL~~yl~-~~d~~~~~~~v~~I~~la~k~~------~~~~~~v 443 (621)
T 2vgl_A 384 SVRQRAVDLLYAMC-DRSNAQQIV------------AEMLSYLE-TADYSIREEIVLKVAILAEKYA------VDYTWYV 443 (621)
T ss_dssp HHHHHHHHHHHHHC-CHHHHHHHH------------HHHHHHHH-HCCHHHHHHHHHHHHHHHHHHC------SSTHHHH
T ss_pred hHHHHHHHHHHHHc-ChhhHHHHH------------HHHHHHHH-hcCHHHHHHHHHHHHHHHHhcC------CcHHHHH
Confidence 55778888888886 677765554 34444443 2355667777777777765322 1236899
Q ss_pred HHHHHHHHHH
Q psy10178 433 SLLVAFIEQA 442 (655)
Q Consensus 433 ~~Ll~FLE~~ 442 (655)
..|+++|+..
T Consensus 444 ~~Ll~ll~~~ 453 (621)
T 2vgl_A 444 DTILNLIRIA 453 (621)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999999874
No 50
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=44.59 E-value=27 Score=37.99 Aligned_cols=70 Identities=19% Similarity=0.127 Sum_probs=47.8
Q ss_pred ChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccH
Q psy10178 353 SPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCI 432 (655)
Q Consensus 353 SPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I 432 (655)
+=++.|+|+|.+++ +++|++.++ ..|.+++.. .+...|..++..+..+|..-.... .|++
T Consensus 365 ~Ir~~alelL~~l~-~~~nv~~iv------------~eL~~~l~~-~d~e~r~~~v~~I~~la~k~~~~~------~~~v 424 (618)
T 1w63_A 365 SIKRRAMELSFALV-NGNNIRGMM------------KELLYFLDS-CEPEFKADCASGIFLAAEKYAPSK------RWHI 424 (618)
T ss_dssp HHHHHHHHHHHHHC-CSSSTHHHH------------HHHHHHHHH-CCHHHHHHHHHHHHHHHHSSCCCH------HHHH
T ss_pred hHHHHHHHHHHHHc-ccccHHHHH------------HHHHHHHHh-CCHHHHHHHHHHHHHHHHHhCccH------HHHH
Confidence 55778888888875 466765443 444444432 456789999999999988532212 4888
Q ss_pred HHHHHHHHHH
Q psy10178 433 SLLVAFIEQA 442 (655)
Q Consensus 433 ~~Ll~FLE~~ 442 (655)
..|+++|+..
T Consensus 425 ~~ll~lL~~~ 434 (618)
T 1w63_A 425 DTIMRVLTTA 434 (618)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999998873
No 51
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=44.55 E-value=11 Score=40.55 Aligned_cols=48 Identities=17% Similarity=0.002 Sum_probs=34.8
Q ss_pred CCCCCCCCccccc-CCCccccccccc-CCcccccccccccccccc----ccCchhhhh
Q psy10178 74 DETAPSKPNTIVN-SDVHVVKSEDKA-NGMTTTKPEETSVKIENN----KEGESTVKK 125 (655)
Q Consensus 74 d~~~ps~P~k~fn-s~~~Vv~~e~k~-~g~~~~e~~~tK~~l~~~----~~~~s~~~k 125 (655)
.+.+|+.|+|.+| +++. .+++ +||.|...++.|++-++. ...|++..+
T Consensus 2 k~~~P~~~mK~l~W~ki~----~~~~~~~t~W~~~~e~~~~~~~~f~~Le~~F~~~~~ 55 (457)
T 3obv_E 2 KVYKPEVQLRRPNWSKFV----AEDLSQDCFWTKVKEDRFENNELFAKLTLAFSAQTK 55 (457)
T ss_dssp CCCCCSSCBCCCCCCEEC----TTTTCSSSSGGGCCGGGGCCTTHHHHHHHHTBCC--
T ss_pred CCCCCCCCCcCCCceeCC----ccccCCCceeeeCccccccChhHHHHHHHHhccccc
Confidence 5678999999998 7776 6666 699999999998754332 344666543
No 52
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=38.38 E-value=6.5 Score=41.27 Aligned_cols=44 Identities=5% Similarity=0.031 Sum_probs=33.4
Q ss_pred CCCCCCCCccccc-CCCcccccccccCCccccccccccc--------cccccccCchhh
Q psy10178 74 DETAPSKPNTIVN-SDVHVVKSEDKANGMTTTKPEETSV--------KIENNKEGESTV 123 (655)
Q Consensus 74 d~~~ps~P~k~fn-s~~~Vv~~e~k~~g~~~~e~~~tK~--------~l~~~~~~~s~~ 123 (655)
+.++|++++|.++ .++.. ++||+|.+.++.++ ++.++.+.|++.
T Consensus 1 ~~p~P~~klK~l~W~ki~~------~~~tiW~~~~~~~~~~~l~~~~d~~~lE~lF~~~ 53 (411)
T 1ux5_A 1 KYPRPHKKLKQLHWEKLDC------TDNSIWGTGKAEKFADDLYEKGVLADLEKAFAAR 53 (411)
T ss_dssp CCCCCSSCBCCCCCCCCSS------CCSSSCCSSHHHHHHHHHHHTTHHHHHHHHTBSS
T ss_pred CCCCCCCCCCCcCcccCCC------CCCCcCcCCccHHHHHhhhhhchHHHHHHHhccc
Confidence 4678999999998 87772 89999999988774 344555566654
No 53
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=34.76 E-value=13 Score=39.43 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=17.7
Q ss_pred HHHHhcCCCCchhhHHHHHHHHH
Q psy10178 603 LLHLSRHPDNKPLFLQQEQRLLA 625 (655)
Q Consensus 603 L~~lak~~enr~~f~~~e~RLL~ 625 (655)
..||.+.|+.|+.|......|-+
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHcCCChhHCcCHHHHHHHHHH
Confidence 35889999999999877666544
No 54
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=30.82 E-value=5.2e+02 Score=28.25 Aligned_cols=31 Identities=29% Similarity=0.208 Sum_probs=19.1
Q ss_pred HHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhh
Q psy10178 355 QRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFL 395 (655)
Q Consensus 355 qrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL 395 (655)
|...++.|++++-.++ | .-.++++..|.+++
T Consensus 258 qi~il~ll~~~~~~~d---------~-~~~~~l~~~L~~il 288 (621)
T 2vgl_A 258 SVKLLRLLQCYPPPED---------P-AVRGRLTECLETIL 288 (621)
T ss_dssp HHHHHHHGGGSSSCSS---------H-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCC---------H-HHHHHHHHHHHHHH
Confidence 6678888988875321 1 11355666666666
No 55
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A*
Probab=28.78 E-value=12 Score=42.88 Aligned_cols=16 Identities=25% Similarity=0.183 Sum_probs=8.0
Q ss_pred HhccCCCCCchhhHHHH
Q psy10178 481 HLSRHPDNKPLFLQQEQ 497 (655)
Q Consensus 481 ~LAk~peNr~~fl~~E~ 497 (655)
+|++ .+||...+-+|+
T Consensus 500 AWC~-~Q~R~~~vw~El 515 (703)
T 3nwa_A 500 AWCE-LQNHELTLWNEA 515 (703)
T ss_dssp HHHH-HHHHHHHHHHHH
T ss_pred HHHH-hhhHHHHHHHHH
Confidence 3554 445555555554
No 56
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=26.14 E-value=14 Score=39.25 Aligned_cols=13 Identities=23% Similarity=0.680 Sum_probs=6.2
Q ss_pred HHhccCCCCCchh
Q psy10178 480 LHLSRHPDNKPLF 492 (655)
Q Consensus 480 ~~LAk~peNr~~f 492 (655)
.||...|+.|..|
T Consensus 499 ~cl~~dP~~RPt~ 511 (535)
T 2h8h_A 499 QCWRKEPEERPTF 511 (535)
T ss_dssp HHTCSSGGGSCCH
T ss_pred HHcCCChhHCcCH
Confidence 3444555555444
No 57
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=23.91 E-value=2.9e+02 Score=29.18 Aligned_cols=92 Identities=16% Similarity=0.118 Sum_probs=61.0
Q ss_pred CChHHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhcccc
Q psy10178 352 LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPC 431 (655)
Q Consensus 352 lSPqrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~ 431 (655)
|++|+==+|.+-+--..+.-=..||-|-|--|...++..|- +.+...+..|+--|.+.-+.|..++...-...|
T Consensus 88 l~~q~de~~~~~e~~~~~~kn~~iLrtsps~ra~~iiekL~-----~~~~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~G- 161 (339)
T 3dad_A 88 LEEQREMLEGFYEEISKGRKPTLILRTQLSVRVNAILEKLY-----SSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEG- 161 (339)
T ss_dssp TTTTTTC--CGGGTGGGTCCCEEEEEECHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHHHHHTCTTHHHHHHHTTH-
T ss_pred hhhhHHHHHHHHHhccccccCceEEecCcHHHHHHHHHHHh-----cCCcHHHHHHHHHHHHHhhcchHHHHHHHHhcc-
Confidence 55666556664222222222346888999877777765554 344455778888888877799999988555555
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy10178 432 ISLLVAFIEQAEQNALGV 449 (655)
Q Consensus 432 I~~Ll~FLE~~~~na~~v 449 (655)
+..|++.+|.+..|++..
T Consensus 162 L~~Li~vi~~~~gN~q~Y 179 (339)
T 3dad_A 162 LSCLIRVGAAADHNYQSY 179 (339)
T ss_dssp HHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHhcChHHHHH
Confidence 899999999988777644
No 58
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=22.55 E-value=1.9e+02 Score=26.62 Aligned_cols=55 Identities=11% Similarity=-0.037 Sum_probs=40.4
Q ss_pred HHHHHHHhhccccccCCcceeecCCChhhHHHHHHHHHHhhcccchhHHHHHHHHHHHHHhhc
Q psy10178 355 QRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAA 417 (655)
Q Consensus 355 qrlALEaL~KLsI~d~NVdliLsTpPfsRle~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~ 417 (655)
+..|+.+|+.|+..-.. .+-|+ ++.++..|.+.++..+. ..|+.|..+|.+++..
T Consensus 74 ~~~a~~~l~~la~~l~~-----~~~~~--~~~ilp~ll~~l~d~~~-~vr~~a~~aL~~~~~~ 128 (242)
T 2qk2_A 74 VAMAGKCLALLAKGLAK-----RFSNY--ASACVPSLLEKFKEKKP-NVVTALREAIDAIYAS 128 (242)
T ss_dssp HHHHHHHHHHHHHHHGG-----GGHHH--HHHHHHHHHHGGGCCCH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh-----hHHHH--HHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHc
Confidence 56899999998843221 11233 78899999999987655 6699999999988763
No 59
>2fv2_A RCD1 required for cell differentiation1 homolog; armadillo-repeat, transcription; 2.20A {Homo sapiens}
Probab=22.47 E-value=2e+02 Score=29.55 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhcccchhHHHHHHHHHHHHHhhcChhhHHHHhhccccHHHHHHHHHHHHHHHHhhhhhcccCcCCCCCCC
Q psy10178 385 ERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDS 464 (655)
Q Consensus 385 e~L~~~LvrLL~~~~~~v~RE~AvvlL~nLa~~d~~~~r~iA~qk~~I~~Ll~FLE~~~~na~~van~hgi~aL~~~Pe~ 464 (655)
++++....+|. ++..||.|+.-|++=-+.-.+++-.+=.+.+.|..|+.=| .+..+... .|.+
T Consensus 3 ~~i~qli~~L~----~p~~Re~AL~eLsk~Re~~~~La~~LW~S~Gtia~LLQEI----------isiYp~ls---pp~L 65 (268)
T 2fv2_A 3 EKIYQWINELS----SPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEI----------VNIYPSIN---PPTL 65 (268)
T ss_dssp HHHHHHHHHTS----STTTHHHHHHHHHHHTTTCTTHHHHHHHSTTHHHHHHHHH----------HHTGGGBT---TBCC
T ss_pred HHHHHHHHHhc----CchhHHHHHHHHHHhhhccccHHHHHHhccCHHHHHHHHH----------HHHcccCC---Cccc
Confidence 34555554543 3445999999999877766777766666666666555433 23444321 1222
Q ss_pred CCCcHHHHHHHHHHHHHhccCCCCCchhhH
Q psy10178 465 MGTSLDMLRRTARTLLHLSRHPDNKPLFLQ 494 (655)
Q Consensus 465 ~gtSv~MlRRAA~~L~~LAk~peNr~~fl~ 494 (655)
-..--.=+|-|...|.++|.+|+-|..|+.
T Consensus 66 t~~~SnRVcnaLaLlQcvAshpetr~~Fl~ 95 (268)
T 2fv2_A 66 TAHQSNRVCNALALLQCVASHPETRSAFLA 95 (268)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTTHHHHHH
T ss_pred CHHHHhHHHHHHHHHHHHHcCcchhhHHHH
Confidence 111124578899999999999999988863
Done!