Your job contains 1 sequence.
>psy10178
MAATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNNKPPSGPPTPGGPPPGPD
MNVGPKVKCISYYDETAPSKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGE
STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP
AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK
NSTFLRLLGRLILAYHEHGLRATKTRNYDKDDDDWTDCCSSLSPQAESEWWWDYMENIRE
NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALE
ALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSA
MSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLL
HLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNSEHASREKRK
IVTKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTA
RTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQTRPDLYQNR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10178
(655 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0261885 - symbol:osa "osa" species:7227 "Drosophil... 1275 2.2e-132 3
UNIPROTKB|H9KYS8 - symbol:ARID1A "Uncharacterized protein... 746 2.8e-75 2
UNIPROTKB|E2RSH9 - symbol:ARID1A "Uncharacterized protein... 708 1.3e-72 4
MGI|MGI:1935147 - symbol:Arid1a "AT rich interactive doma... 706 2.0e-72 4
UNIPROTKB|F1P479 - symbol:Gga.35990 "Uncharacterized prot... 714 2.9e-72 3
UNIPROTKB|F1NKI7 - symbol:Gga.35990 "Uncharacterized prot... 714 2.9e-72 3
UNIPROTKB|Q96SM7 - symbol:ARID1A "AT-rich interactive dom... 707 6.0e-72 2
UNIPROTKB|O14497 - symbol:ARID1A "AT-rich interactive dom... 707 8.7e-72 4
UNIPROTKB|F1SB28 - symbol:ARID1B "Uncharacterized protein... 717 1.1e-71 2
RGD|1310500 - symbol:Arid1a "AT rich interactive domain 1... 707 1.4e-71 4
UNIPROTKB|J9NTN3 - symbol:ARID1A "Uncharacterized protein... 708 3.7e-71 3
UNIPROTKB|E1B925 - symbol:ARID1A "Uncharacterized protein... 704 8.8e-71 3
UNIPROTKB|H0Y488 - symbol:ARID1A "AT-rich interactive dom... 707 2.6e-70 2
ZFIN|ZDB-GENE-080220-35 - symbol:arid1aa "AT rich interac... 705 4.4e-70 3
UNIPROTKB|E1BKQ8 - symbol:Bt.110992 "Uncharacterized prot... 713 5.0e-70 2
UNIPROTKB|F1MKU0 - symbol:Bt.110992 "Uncharacterized prot... 713 6.8e-70 2
UNIPROTKB|Q8NFD5 - symbol:ARID1B "AT-rich interactive dom... 701 1.7e-69 3
UNIPROTKB|F1PBJ5 - symbol:ARID1B "Uncharacterized protein... 704 1.4e-68 2
UNIPROTKB|H0Y7H8 - symbol:ARID1B "AT-rich interactive dom... 701 1.8e-68 2
UNIPROTKB|F1LNP1 - symbol:F1LNP1 "Uncharacterized protein... 700 2.3e-68 2
UNIPROTKB|G3XAA0 - symbol:ARID1B "AT rich interactive dom... 701 3.6e-68 2
RGD|708504 - symbol:Arid1b "AT rich interactive domain 1B... 692 1.7e-67 2
WB|WBGene00002717 - symbol:let-526 species:6239 "Caenorha... 485 1.6e-47 2
ZFIN|ZDB-GENE-030131-5725 - symbol:arid1ab "AT rich inter... 470 2.4e-44 2
UNIPROTKB|Q9N6K2 - symbol:osa "Trithorax group protein os... 462 8.1e-44 1
UNIPROTKB|Q9NGB4 - symbol:osa "Trithorax group protein os... 462 8.1e-44 1
>FB|FBgn0261885 [details] [associations]
symbol:osa "osa" species:7227 "Drosophila melanogaster"
[GO:0046530 "photoreceptor cell differentiation" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IMP] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0007379 "segment
specification" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISS;IDA;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=IC] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] [GO:0042058 "regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
EMBL:AE014297 GO:GO:0048190 GO:GO:0045893 GO:GO:0016055
GO:GO:0003677 GO:GO:0008586 GO:GO:0006351 GO:GO:0016568
eggNOG:NOG12793 GO:GO:0007379 GO:GO:0007480 KO:K11653
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 GO:GO:0046530 GO:GO:0008587
GO:GO:0035060 GO:GO:0042058 EMBL:AF053091 PIR:T13049
RefSeq:NP_001163639.1 RefSeq:NP_524392.2 RefSeq:NP_732263.1
UniGene:Dm.2989 ProteinModelPortal:Q8IN94 SMR:Q8IN94 DIP:DIP-20699N
IntAct:Q8IN94 MINT:MINT-297379 STRING:Q8IN94 PaxDb:Q8IN94
PRIDE:Q8IN94 EnsemblMetazoa:FBtr0089581 EnsemblMetazoa:FBtr0301487
GeneID:42130 KEGG:dme:Dmel_CG7467 CTD:42130 FlyBase:FBgn0261885
InParanoid:Q8IN94 OMA:SQMGQGP OrthoDB:EOG4MCVF9 PhylomeDB:Q8IN94
ChiTaRS:osa GenomeRNAi:42130 NextBio:827314 Bgee:Q8IN94
GermOnline:CG7467 Uniprot:Q8IN94
Length = 2716
Score = 1275 (453.9 bits), Expect = 2.2e-132, Sum P(3) = 2.2e-132
Identities = 276/448 (61%), Positives = 322/448 (71%)
Query: 93 KSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKT-DNTKEGEATVKLENG 151
K E K +T E+T K G S+ + EG+++ T + + A VK E G
Sbjct: 2058 KPEIKTEENSTE--EQTFNKKRRLVSGGSSSSGAHAEGKKSKLTSEEFAQPNAEVKKEPG 2115
Query: 152 GEE----PSATD-KAEKE--TTEKPEVKFVPKIIDPAGNAK-------RRRLSEYEDESY 197
+ P D +A ++ T P I DP AK RRR S +EDE Y
Sbjct: 2116 TADSDCRPVDMDIEAPQQRLTNGVAPCSSTPAIFDPRTTAKDEARVLQRRRDSSFEDECY 2175
Query: 198 CRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHE 257
RDEASL+ VS+SQD++ARRCIALSNI RNLTFVPGNE +K++ FL +LGRL+L HE
Sbjct: 2176 TRDEASLHLVSESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHE 2235
Query: 258 HGLRATKTRNYXXXXXXXXX-CCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLD 316
H R KTRNY CSSL Q E EWWWDY+ IREN+LV++ANI+GH++L
Sbjct: 2236 HLRRTPKTRNYDREEDTDFSDSCSSL--QGEREWWWDYLITIRENMLVAMANIAGHLELS 2293
Query: 317 QYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKLCVTDNNVDL 374
+Y E I+RP++DGLLHWAVCP+A GQDPFPS N LSPQRLALEALCKLCVTD NVDL
Sbjct: 2294 RYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSVLSPQRLALEALCKLCVTDANVDL 2353
Query: 375 VIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQSPCISL 434
VIATPP++RLE+L VLTR LC+NEDQVLREF VNLLHYLAAADSAM+RT+ALQSPCIS
Sbjct: 2354 VIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISY 2413
Query: 435 LVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQ 494
LVAFIEQAEQ ALGVANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+Q
Sbjct: 2414 LVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQ 2473
Query: 495 QEQRLLALVMSQILDQQVAAIISRVLYQ 522
QEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 2474 QEQRLLGLVMSHILDQQVALIISRVLYQ 2501
Score = 306 (112.8 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 2428 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 2487
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 2488 DQQVALIISRVLYQ 2501
Score = 53 (23.7 bits), Expect = 2.2e-132, Sum P(3) = 2.2e-132
Identities = 15/33 (45%), Positives = 16/33 (48%)
Query: 2 AATQAEPPVPEASGPVDPGASVDMEHGGPPPPQ 34
AA A +A GP PG HG PPPPQ
Sbjct: 245 AAAAAAAQQQQAGGPPPPG------HG-PPPPQ 270
Score = 49 (22.3 bits), Expect = 5.9e-132, Sum P(3) = 5.9e-132
Identities = 13/38 (34%), Positives = 16/38 (42%)
Query: 5 QAEPPVPEASGP---VDPGASVDMEHGGPPPPQSLQNG 39
Q P P A+ P PGA+ G P P + NG
Sbjct: 15 QGGAPAPAATPPSAGAAPGAATPPTSGPPTPNNNSNNG 52
Score = 47 (21.6 bits), Expect = 2.2e-132, Sum P(3) = 2.2e-132
Identities = 22/112 (19%), Positives = 35/112 (31%)
Query: 28 GGPPPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNVGPKVKCISYYDETAPSKPNTIVNS 87
GGPPPPQ + N GP+ Y + P +
Sbjct: 754 GGPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQ----GYGNGPTGMHPGMPMGP 809
Query: 88 DVHVVKSEDKAN-GMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDN 138
H+ N G T+ P ++ + +G+ + G E + DN
Sbjct: 810 PHHMGPPHGPTNMGPPTSTPPQSQMLQGGQPQGQGASGGPESGGPEHISQDN 861
Score = 47 (21.6 bits), Expect = 9.6e-132, Sum P(3) = 9.6e-132
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 9 PVPEASGPVDPGASVDMEHGGPPPP 33
P A+ A+ + GGPPPP
Sbjct: 238 PQQAAASAAAAAAAQQQQAGGPPPP 262
Score = 47 (21.6 bits), Expect = 8.3e-130, Sum P(2) = 8.3e-130
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 7 EPPVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNN 43
+PPV A GP M GGPP Q Q + +N
Sbjct: 550 QPPVG-AGGPPPMPPHPGMP-GGPPQQQQSQQQQASN 584
Score = 47 (21.6 bits), Expect = 8.3e-130, Sum P(2) = 8.3e-130
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 8 PPVPEASGPVD-PGASVDMEHGGPPPPQSLQNGEKNNK 44
PP+ + +G + G PPPPQ Q ++ +
Sbjct: 1545 PPIQQPAGVAQWDQHRYPPQQGPPPPPQQQQQPQQQQQ 1582
Score = 47 (21.6 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 113 IENNKEGESTVKKENTEGEETVKTDNTKEGEATV----KLENGGEEPS---ATDKAEKET 165
I ++K+G + ++ + +KT+ E T +L +GG S A K K T
Sbjct: 2040 IRSDKKGRKRTELASSSRKPEIKTEENSTEEQTFNKKRRLVSGGSSSSGAHAEGKKSKLT 2099
Query: 166 TEK---P--EVKFVPKIID 179
+E+ P EVK P D
Sbjct: 2100 SEEFAQPNAEVKKEPGTAD 2118
Score = 46 (21.3 bits), Expect = 1.2e-131, Sum P(3) = 1.2e-131
Identities = 8/18 (44%), Positives = 8/18 (44%)
Query: 16 PVDPGASVDMEHGGPPPP 33
P P HGGP PP
Sbjct: 104 PPPPHMQQQQHHGGPAPP 121
Score = 46 (21.3 bits), Expect = 1.1e-129, Sum P(2) = 1.1e-129
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 10 VPEASGP-VDPGASVDMEHGGPPPP 33
VP P V PG V + PPPP
Sbjct: 1665 VPSPGLPQVGPGGMVKPPYAMPPPP 1689
Score = 45 (20.9 bits), Expect = 1.4e-129, Sum P(2) = 1.4e-129
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 29 GPPPPQSLQNGEKNNK 44
GPPPPQ Q G++ +
Sbjct: 1291 GPPPPQQ-QQGQQGQQ 1305
Score = 43 (20.2 bits), Expect = 2.5e-131, Sum P(3) = 2.5e-131
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPPPQSLQNG 39
PP P+ P PGA GPPPP + Q G
Sbjct: 663 PPRPQY--P--PGAYAT----GPPPPPTSQAG 686
Score = 42 (19.8 bits), Expect = 3.2e-131, Sum P(3) = 3.2e-131
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPPP 33
PP P + PG + H PP P
Sbjct: 120 PPPPGGAPEHAPGVKEEYTHLPPPHP 145
Score = 42 (19.8 bits), Expect = 3.2e-131, Sum P(3) = 3.2e-131
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQ 37
Q PP P S P +S H P PQ Q
Sbjct: 438 QQPPPPPHVSAGGPPPSS-SPGHAPSPSPQPSQ 469
Score = 42 (19.8 bits), Expect = 2.8e-129, Sum P(2) = 2.8e-129
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPPPQSLQNG 39
PP + G G GG PPP Q+G
Sbjct: 1293 PPPQQQQG--QQGQQPPPSVGGGPPPAPQQHG 1322
Score = 41 (19.5 bits), Expect = 4.1e-131, Sum P(3) = 4.1e-131
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 11 PEASGPVDPGASVDMEHGG--PPPPQSLQNG 39
P+ + P P + M + PPPPQ G
Sbjct: 593 PQQTPPPAPPPNQGMNNMATPPPPPQGAAGG 623
Score = 41 (19.5 bits), Expect = 3.6e-129, Sum P(2) = 3.6e-129
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 16 PVDPGASVDMEHG----GPP---PPQS--LQNGE 40
P+ P + HG GPP PPQS LQ G+
Sbjct: 806 PMGPPHHMGPPHGPTNMGPPTSTPPQSQMLQGGQ 839
Score = 40 (19.1 bits), Expect = 5.2e-131, Sum P(3) = 5.2e-131
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 11 PEASGPVDPGASVDMEHGGPPPPQS 35
PE + P G+S G P PP S
Sbjct: 405 PEPNRPWPGGSSPSPGSGHPLPPAS 429
Score = 40 (19.1 bits), Expect = 5.2e-131, Sum P(3) = 5.2e-131
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 8 PPVPE--ASGPVDPGASVDME------HGGPPPPQSLQNG 39
PP P ++ DP + +G PPPP S G
Sbjct: 42 PPTPNNNSNNGSDPSIQQQQQNVAPHPYGAPPPPGSGPGG 81
Score = 40 (19.1 bits), Expect = 4.6e-129, Sum P(2) = 4.6e-129
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 19 PGASVDMEHGGPPPPQSLQNGEKN 42
PG V GGPPP Q ++N
Sbjct: 348 PGGPVP---GGPPPGTGQQPPQQN 368
Score = 40 (19.1 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 342 QDPFPSSSCNLSPQRLALEALCKLCVTDNNVD 373
Q+PF S+ ++LCKL D+N D
Sbjct: 975 QEPFRSTITTTKKS----DSLCKLYEMDDNPD 1002
Score = 39 (18.8 bits), Expect = 5.8e-129, Sum P(2) = 5.8e-129
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHG-G--PPPPQ 34
Q + P P G P +HG G PP PQ
Sbjct: 1302 QGQQPPPSVGGGPPPAPQ---QHGPGQVPPSPQ 1331
Score = 38 (18.4 bits), Expect = 8.5e-131, Sum P(3) = 8.5e-131
Identities = 14/40 (35%), Positives = 15/40 (37%)
Query: 9 PVPEASGP-----VDPGASVDMEH------GGPPPPQSLQ 37
P P SGP DP A + H PPPP Q
Sbjct: 72 PPPPGSGPGGPPGPDPAAVMHYHHLHQQQQQHPPPPHMQQ 111
Score = 37 (18.1 bits), Expect = 1.1e-130, Sum P(3) = 1.1e-130
Identities = 9/26 (34%), Positives = 10/26 (38%)
Query: 9 PVPEASGPVDPGASVDMEHGGPPPPQ 34
P GP S+ PPPPQ
Sbjct: 204 PGQPPQGPTPTLNSLLQSSNPPPPPQ 229
Score = 37 (18.1 bits), Expect = 9.5e-129, Sum P(2) = 9.5e-129
Identities = 10/25 (40%), Positives = 10/25 (40%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PP P GP P S G P P
Sbjct: 748 PPPPVVGGPPPPQGS-----GSPRP 767
Score = 37 (18.1 bits), Expect = 9.5e-129, Sum P(2) = 9.5e-129
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPP--PPQSLQ 37
Q +PP + +GP PG PP PPQ Q
Sbjct: 1581 QQQPPYQQVAGP--PGQQ-------PPQAPPQWAQ 1606
Score = 37 (18.1 bits), Expect = 9.5e-129, Sum P(2) = 9.5e-129
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 9 PVPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNN 43
P P +S P S P P Q L G+ +N
Sbjct: 451 PPPSSSPGHAPSPSPQPSQASPSPHQELI-GQNSN 484
Score = 37 (18.1 bits), Expect = 9.5e-129, Sum P(2) = 9.5e-129
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPP-QSLQNG 39
+A P GP GGP PP Q++ G
Sbjct: 1410 EAPPTGANQYGPYGSRPYSQPPPGGPQPPTQTVAGG 1445
>UNIPROTKB|H9KYS8 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 InterPro:IPR016024
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:AADN02051965 EMBL:AADN02051964
Ensembl:ENSGALT00000000486 Uniprot:H9KYS8
Length = 1366
Score = 746 (267.7 bits), Expect = 2.8e-75, Sum P(2) = 2.8e-75
Identities = 174/415 (41%), Positives = 243/415 (58%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENG-GEEPSATDKAEKET----TEKP 169
+ K + EGE + +D++ E T +++ PS+ E+E TEK
Sbjct: 959 SRKRAAAESNPSTREGE-ALPSDSSSEKRITATMDDMLSARPSSLSGEEEEAKASETEK- 1016
Query: 170 EVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLT 229
E KF P I PA + R + EDE + +DE L + D QD++A+RCI +SNI+R+L+
Sbjct: 1017 ESKF-PFGISPAQS--HRNIKILEDEPHSKDETPLCTIQDWQDSLAKRCICVSNIIRSLS 1073
Query: 230 FVPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAES 288
FVPGN+ E SK+ L +LG+LIL +H+H R Y C+ +
Sbjct: 1074 FVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------ 1127
Query: 289 EWWWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSS 348
EWWWD +E +REN LV+LANISG +DL YPE I PILDGLLHWAVCP+A+ QDPFP+
Sbjct: 1128 EWWWDCLEVLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTL 1187
Query: 349 SCN--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREF 406
N LSPQRL LE L KL + DNNVDL++ATPP++RLE+L L RFL ++ V RE
Sbjct: 1188 GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTLVRFLSDRKNPVCREM 1247
Query: 407 GVNLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMG 466
V LL LA DS +R IA+Q I L+ F+E + +Q G+ +++ P
Sbjct: 1248 AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNAPFE-S 1306
Query: 467 TSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
TS+DM+RR AR LL L++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 1307 TSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 1361
Score = 51 (23.0 bits), Expect = 2.8e-75, Sum P(2) = 2.8e-75
Identities = 16/45 (35%), Positives = 20/45 (44%)
Query: 4 TQAEPPVPEASG----PVDP-GASVDMEHGG---PPPPQSLQNGE 40
T+ +PP P SG P P S M GG PP P S + +
Sbjct: 219 TKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQ 263
>UNIPROTKB|E2RSH9 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 OMA:GSQYGPQ Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AAEX03001719 Ensembl:ENSCAFT00000019631 Uniprot:E2RSH9
Length = 2286
Score = 708 (254.3 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 161/399 (40%), Positives = 228/399 (57%)
Query: 128 TEGEETVKTDNTKEGEATVKLEN--GGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAK 185
T +E D E T +++ + T++ K T E P I PA +
Sbjct: 1892 TTEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEEGAKSTEATKESSKFPFGISPAQS-- 1949
Query: 186 RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFL 245
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+ L
Sbjct: 1950 HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLL 2009
Query: 246 RLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVLV 304
+LG+LIL +H+H R Y C+ + EWWWD +E +REN LV
Sbjct: 2010 LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTLV 2063
Query: 305 SLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEAL 362
+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE L
Sbjct: 2064 TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETL 2123
Query: 363 CKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS 422
KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS +
Sbjct: 2124 SKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA 2183
Query: 423 RTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHL 482
R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL L
Sbjct: 2184 RAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLAL 2242
Query: 483 SRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 2243 AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 2281
Score = 48 (22.0 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 6 AEPPVPEA---SGPVD--PGASVDMEHGGPPPPQS 35
A PP P+A S P PG+ G PPP S
Sbjct: 221 AYPPPPQAYALSSPRGGTPGSGAAAAAGSKPPPSS 255
Score = 44 (20.5 bits), Expect = 1.0e-70, Sum P(3) = 1.0e-70
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 17 VDPGASVDMEHGGPPPPQS-LQNGEKNNK 44
V P A+ + G PPPP S L+ E+ +
Sbjct: 5 VAPAAASSL--GNPPPPPSELKKAEQQQR 31
Score = 44 (20.5 bits), Expect = 1.0e-70, Sum P(3) = 1.0e-70
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQN 38
QA+ P + P P +S + P PQS Q+
Sbjct: 556 QAQSPYQQQQ-PQQPASSTLSQQAAYPQPQSQQS 588
Score = 40 (19.1 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKL-ENGGE 153
NNK + T K TE + + +T E KL E GGE
Sbjct: 983 NNK-ADGTPK---TESKSKKSSSSTTTNEKITKLYELGGE 1018
Score = 39 (18.8 bits), Expect = 7.1e-69, Sum P(2) = 7.1e-69
Identities = 9/25 (36%), Positives = 9/25 (36%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PPV G E GPPP
Sbjct: 1876 PPVTRKHVTAPEGTPGTTEQEGPPP 1900
Score = 38 (18.4 bits), Expect = 1.3e-72, Sum P(4) = 1.3e-72
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 599 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 631
>MGI|MGI:1935147 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006325
"chromatin organization" evidence=IPI] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=ISO;IDA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 MGI:MGI:1935147 GO:GO:0045893
GO:GO:0007399 GO:GO:0030521 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
eggNOG:NOG12793 CTD:8289 HOVERGEN:HBG058196 KO:K11653
OrthoDB:EOG437RD2 ChiTaRS:ARID1A GO:GO:0030520 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF268912
EMBL:CR751606 EMBL:BX537327 EMBL:CR925752 EMBL:BC082554
IPI:IPI00127131 IPI:IPI00955140 IPI:IPI00955160 IPI:IPI00974963
RefSeq:NP_001074288.1 UniGene:Mm.22478 ProteinModelPortal:A2BH40
SMR:A2BH40 DIP:DIP-58952N IntAct:A2BH40 MINT:MINT-4301934
STRING:A2BH40 PhosphoSite:A2BH40 PaxDb:A2BH40 PRIDE:A2BH40
Ensembl:ENSMUST00000008024 Ensembl:ENSMUST00000105897 GeneID:93760
KEGG:mmu:93760 UCSC:uc008vdh.1 UCSC:uc008vdj.1
GeneTree:ENSGT00550000074575 HOGENOM:HOG000232161 InParanoid:A2BH40
NextBio:351643 Bgee:A2BH40 Genevestigator:A2BH40 GO:GO:0006325
Uniprot:A2BH40
Length = 2283
Score = 706 (253.6 bits), Expect = 2.0e-72, Sum P(4) = 2.0e-72
Identities = 161/399 (40%), Positives = 226/399 (56%)
Query: 128 TEGEETVKTDNTKEGEATVKLEN--GGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAK 185
T +E D E T +++ + TD+ K E P I PA +
Sbjct: 1889 TTEQEGPPPDGLPEKRITATMDDMLSTRSSTLTDEGAKSAEATKESSKFPFGISPAQS-- 1946
Query: 186 RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFL 245
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+ L
Sbjct: 1947 HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLL 2006
Query: 246 RLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVLV 304
+LG+LIL +H+H R Y C + EWWWD +E +REN LV
Sbjct: 2007 LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCDKV------EWWWDCLEMLRENTLV 2060
Query: 305 SLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEAL 362
+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE L
Sbjct: 2061 TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETL 2120
Query: 363 CKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS 422
KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS +
Sbjct: 2121 SKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA 2180
Query: 423 RTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHL 482
R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL L
Sbjct: 2181 RAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLAL 2239
Query: 483 SRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 2240 AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 2278
Score = 48 (22.0 bits), Expect = 2.0e-72, Sum P(4) = 2.0e-72
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 6 AEPPVPEA---SGPVD--PGASVDMEHGGPPPPQS 35
A PP P+A S P PG+ G PPP S
Sbjct: 222 AYPPPPQAYALSSPRGGTPGSGAAAAAGSKPPPSS 256
Score = 44 (20.5 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 17 VDPGASVDMEHGGPPPPQS-LQNGEKNNK 44
V P A+ + G PPPP S L+ E+ +
Sbjct: 5 VAPAAASSL--GNPPPPPSELKKAEQQQR 31
Score = 40 (19.1 bits), Expect = 2.0e-72, Sum P(4) = 2.0e-72
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKL-ENGGE 153
NNK + T K TE + + +T E KL E GGE
Sbjct: 983 NNK-ADGTPK---TESKSKKSSSSTTTNEKITKLYELGGE 1018
Score = 38 (18.4 bits), Expect = 2.0e-72, Sum P(4) = 2.0e-72
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 599 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 631
Score = 38 (18.4 bits), Expect = 2.3e-71, Sum P(4) = 2.3e-71
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 6 AEPPVPEASGPVDPGASVDMEHGGPPPPQS 35
++PP ++ P S +H PP S
Sbjct: 524 SQPPHQQSPTPYPSQQSTTQQHPQSQPPYS 553
Score = 38 (18.4 bits), Expect = 7.1e-70, Sum P(3) = 7.1e-70
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 11 PEASGPVDPGASVDMEHGGPPPPQSLQNG 39
P++S P+D + + G P S Q G
Sbjct: 380 PQSSSPMDQMGKMRPQPYGGTNPYSQQQG 408
>UNIPROTKB|F1P479 [details] [associations]
symbol:Gga.35990 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:AADN02025422 EMBL:AADN02025423 IPI:IPI00814474
Ensembl:ENSGALT00000022247 ArrayExpress:F1P479 Uniprot:F1P479
Length = 1614
Score = 714 (256.4 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 163/404 (40%), Positives = 234/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S KK++ EG+ + K AT+ + P A + ++ KF P I
Sbjct: 1217 SPSKKKDLEGKGESEEQQEKSITATID-DVLSARPGALPEDSNSGSQTESSKF-PFGIHQ 1274
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1275 AKS--HRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSK 1332
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1333 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACS-----KDEWWWDCLEVLRD 1387
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1388 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1447
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+L L R++ ++ V RE + LL LA D
Sbjct: 1448 LETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1507
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1508 TLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1566
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1567 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1610
Score = 46 (21.3 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 93 KSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEE 132
K +D + T EE I+ E E EN EGEE
Sbjct: 1086 KKDDSQSLAEDTGKEENDECIDCFDEEEEEGDDENVEGEE 1125
Score = 39 (18.8 bits), Expect = 4.0e-70, Sum P(2) = 4.0e-70
Identities = 14/67 (20%), Positives = 27/67 (40%)
Query: 90 HVVKSEDKANGMTTTK-PEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKL 148
++V S G+ P E+ + + +G+ + E + + +T GE K+
Sbjct: 322 NMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGAPQ-PESKSKKSSSSTTTGEKITKV 380
Query: 149 ENGGEEP 155
G EP
Sbjct: 381 YELGNEP 387
Score = 38 (18.4 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 476 IERGEEPPPEVFSTGD 491
>UNIPROTKB|F1NKI7 [details] [associations]
symbol:Gga.35990 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
OMA:PIGIQGR EMBL:AADN02025422 EMBL:AADN02025423 IPI:IPI00818092
Ensembl:ENSGALT00000037541 ArrayExpress:F1NKI7 Uniprot:F1NKI7
Length = 1618
Score = 714 (256.4 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 163/404 (40%), Positives = 234/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S KK++ EG+ + K AT+ + P A + ++ KF P I
Sbjct: 1221 SPSKKKDLEGKGESEEQQEKSITATID-DVLSARPGALPEDSNSGSQTESSKF-PFGIHQ 1278
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1279 AKS--HRNIKLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSK 1336
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1337 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEEEDKGVACS-----KDEWWWDCLEVLRD 1391
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1392 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1451
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+L L R++ ++ V RE + LL LA D
Sbjct: 1452 LETLCKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1511
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1512 TLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1570
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1571 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1614
Score = 46 (21.3 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 93 KSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEE 132
K +D + T EE I+ E E EN EGEE
Sbjct: 1090 KKDDSQSLAEDTGKEENDECIDCFDEEEEEGDDENVEGEE 1129
Score = 39 (18.8 bits), Expect = 4.0e-70, Sum P(2) = 4.0e-70
Identities = 14/67 (20%), Positives = 27/67 (40%)
Query: 90 HVVKSEDKANGMTTTK-PEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKL 148
++V S G+ P E+ + + +G+ + E + + +T GE K+
Sbjct: 322 NMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEGAPQ-PESKSKKSSSSTTTGEKITKV 380
Query: 149 ENGGEEP 155
G EP
Sbjct: 381 YELGNEP 387
Score = 38 (18.4 bits), Expect = 2.9e-72, Sum P(3) = 2.9e-72
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 476 IERGEEPPPEVFSTGD 491
>UNIPROTKB|Q96SM7 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0006325 "chromatin
organization" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] EMBL:AL034380 GO:GO:0016514
EMBL:AL512408 UniGene:Hs.468972 HGNC:HGNC:11110 ChiTaRS:ARID1A
InterPro:IPR021906 Pfam:PF12031 HOGENOM:HOG000232161 GO:GO:0006325
EMBL:AK027655 IPI:IPI00472891 STRING:Q96SM7 Ensembl:ENST00000540690
UCSC:uc009vsm.1 HOVERGEN:HBG075244 Uniprot:Q96SM7
Length = 613
Score = 707 (253.9 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 164/400 (41%), Positives = 230/400 (57%)
Query: 128 TEGEETVKTDNTKEGEATVKLENGGEEPSAT---DKAEKETTEKPEVKFVPKIIDPAGNA 184
T +E D E T +++ S+T D A+ K KF P I PA +
Sbjct: 219 TTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKF-PFGISPAQS- 276
Query: 185 KRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTF 244
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+
Sbjct: 277 -HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGL 335
Query: 245 LRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVL 303
L +LG+LIL +H+H R Y C+ + EWWWD +E +REN L
Sbjct: 336 LLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTL 389
Query: 304 VSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEA 361
V+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE
Sbjct: 390 VTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLET 449
Query: 362 LCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAM 421
L KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS
Sbjct: 450 LSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLA 509
Query: 422 SRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLH 481
+R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL
Sbjct: 510 ARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLA 568
Query: 482 LSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
L++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 569 LAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 608
Score = 39 (18.8 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PP P G + GPPP
Sbjct: 203 PPAPRKHVTTAEGTPGTTDQEGPPP 227
>UNIPROTKB|O14497 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=NAS]
[GO:0042921 "glucocorticoid receptor signaling pathway"
evidence=IDA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA;TAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030521 "androgen receptor signaling pathway"
evidence=IDA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=TAS] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IDA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 EMBL:AL034380 GO:GO:0007399 GO:GO:0030521
GO:GO:0003677 EMBL:CH471059 GO:GO:0006357 GO:GO:0006351
GO:GO:0000790 GO:GO:0003713 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 eggNOG:NOG12793 EMBL:AF231056 EMBL:AL512408
EMBL:AF521670 EMBL:AF219114 EMBL:AF265208 EMBL:AB001895
EMBL:AB024075 EMBL:AF268913 EMBL:AK223275 IPI:IPI00642705
IPI:IPI00643722 IPI:IPI00929427 PIR:T00022 RefSeq:NP_006006.3
RefSeq:NP_624361.1 UniGene:Hs.468972 PDB:1RYU PDBsum:1RYU
ProteinModelPortal:O14497 SMR:O14497 DIP:DIP-33016N IntAct:O14497
STRING:O14497 PhosphoSite:O14497 PaxDb:O14497 PRIDE:O14497
Ensembl:ENST00000324856 Ensembl:ENST00000374152
Ensembl:ENST00000457599 GeneID:8289 KEGG:hsa:8289 UCSC:uc001bmt.1
UCSC:uc001bmu.1 UCSC:uc001bmx.1 CTD:8289 GeneCards:GC01P027022
HGNC:HGNC:11110 HPA:CAB016334 HPA:HPA005456 MIM:603024 MIM:614607
neXtProt:NX_O14497 Orphanet:1465 PharmGKB:PA35960
HOVERGEN:HBG058196 InParanoid:O14497 KO:K11653 OMA:GSQYGPQ
OrthoDB:EOG437RD2 PhylomeDB:O14497 ChiTaRS:ARID1A
EvolutionaryTrace:O14497 GenomeRNAi:8289 NextBio:31061
ArrayExpress:O14497 Bgee:O14497 Genevestigator:O14497
GermOnline:ENSG00000117713 GO:GO:0048096 GO:GO:0030520
GO:GO:0006337 GO:GO:0042766 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 Uniprot:O14497
Length = 2285
Score = 707 (253.9 bits), Expect = 8.7e-72, Sum P(4) = 8.7e-72
Identities = 164/400 (41%), Positives = 230/400 (57%)
Query: 128 TEGEETVKTDNTKEGEATVKLENGGEEPSAT---DKAEKETTEKPEVKFVPKIIDPAGNA 184
T +E D E T +++ S+T D A+ K KF P I PA +
Sbjct: 1891 TTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKF-PFGISPAQS- 1948
Query: 185 KRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTF 244
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+
Sbjct: 1949 -HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGL 2007
Query: 245 LRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVL 303
L +LG+LIL +H+H R Y C+ + EWWWD +E +REN L
Sbjct: 2008 LLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTL 2061
Query: 304 VSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEA 361
V+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE
Sbjct: 2062 VTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLET 2121
Query: 362 LCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAM 421
L KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS
Sbjct: 2122 LSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLA 2181
Query: 422 SRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLH 481
+R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL
Sbjct: 2182 ARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLA 2240
Query: 482 LSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
L++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 2241 LAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 2280
Score = 50 (22.7 bits), Expect = 2.4e-71, Sum P(3) = 2.4e-71
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 17 VDPGASVDMEHGGPPPPQSLQNGEKNNK 44
V P A+ + + PPPP L+ E+ +
Sbjct: 5 VAPAAASSLGNPPPPPPSELKKAEQQQR 32
Score = 42 (19.8 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 12/32 (37%), Positives = 13/32 (40%)
Query: 8 PPVPE--ASGPVD--PGASVDMEHGGPPPPQS 35
PP P S P PG+ G PPP S
Sbjct: 224 PPAPAYALSSPRGGTPGSGAAAAAGSKPPPSS 255
Score = 42 (19.8 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQN 38
QA+ P + P P S + P PQS Q+
Sbjct: 555 QAQSPYQQQQ-PQQPAPSTLSQQAAYPQPQSQQS 587
Score = 41 (19.5 bits), Expect = 8.7e-72, Sum P(4) = 8.7e-72
Identities = 21/76 (27%), Positives = 32/76 (42%)
Query: 79 SKPNTIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDN 138
S T+ N+ + S + G+ K + K+ N +G T K TE + + +
Sbjct: 949 SMGGTMANNSAGMAASPEMM-GLGDVKLTPAT-KMNNKADG--TPK---TESKSKKSSSS 1001
Query: 139 TKEGEATVKL-ENGGE 153
T E KL E GGE
Sbjct: 1002 TTTNEKITKLYELGGE 1017
Score = 40 (19.1 bits), Expect = 8.7e-72, Sum P(4) = 8.7e-72
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 6 AEPPVPEASGPVDPGASVDMEHGGPPPPQS 35
++PP ++ P S +H PP S
Sbjct: 523 SQPPHQQSPAPYPSQQSTTQQHPQSQPPYS 552
Score = 39 (18.8 bits), Expect = 9.1e-69, Sum P(2) = 9.1e-69
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PP P G + GPPP
Sbjct: 1875 PPAPRKHVTTAEGTPGTTDQEGPPP 1899
Score = 38 (18.4 bits), Expect = 8.7e-72, Sum P(4) = 8.7e-72
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 598 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 630
>UNIPROTKB|F1SB28 [details] [associations]
symbol:ARID1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0016514 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:CU407155 Ensembl:ENSSSCT00000004493 OMA:KMAGADP Uniprot:F1SB28
Length = 1292
Score = 717 (257.5 bits), Expect = 1.1e-71, Sum P(2) = 1.1e-71
Identities = 164/404 (40%), Positives = 235/404 (58%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
ST +K++ EG+ + K AT+ + P A + T+ KF P I
Sbjct: 895 STGRKKDQEGKADSEEQQEKSIIATID-DVLSARPGALPEDANPGTQAESSKF-PFGIHQ 952
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDEA L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 953 AKS--HRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1010
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1011 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1065
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1066 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1125
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1126 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1185
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1186 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1244
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1245 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1288
Score = 45 (20.9 bits), Expect = 1.1e-71, Sum P(2) = 1.1e-71
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 90 HVVKSEDKANGMTTT-KPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKL 148
++V S + G+ P E+ V + +G+ + E + + +T GE K+
Sbjct: 43 NMVNSSTASMGLADMMSPGESKVPLPLKADGKEEGAAQ-PESKSKKSSSSTTTGEKITKV 101
Query: 149 ENGGEEP 155
G EP
Sbjct: 102 YELGNEP 108
Score = 38 (18.4 bits), Expect = 6.0e-71, Sum P(2) = 6.0e-71
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 197 IERGEEPPPEVFSTGD 212
>RGD|1310500 [details] [associations]
symbol:Arid1a "AT rich interactive domain 1A (SWI-like)"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006325 "chromatin
organization" evidence=ISO] [GO:0006337 "nucleosome disassembly"
evidence=IEA;ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0016514 "SWI/SNF complex" evidence=IEA;ISO]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA;ISO] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA;ISO] [GO:0030521 "androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0042921 "glucocorticoid
receptor signaling pathway" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0071564 "npBAF complex" evidence=IEA;ISO] [GO:0071565 "nBAF
complex" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:1310500 GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OrthoDB:EOG437RD2
GO:GO:0030520 GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
IPI:IPI00768472 Ensembl:ENSRNOT00000009173 UCSC:RGD:1310500
Uniprot:D4A3E3
Length = 2291
Score = 707 (253.9 bits), Expect = 1.4e-71, Sum P(4) = 1.4e-71
Identities = 161/399 (40%), Positives = 227/399 (56%)
Query: 128 TEGEETVKTDNTKEGEATVKLEN--GGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAK 185
T +E D E T +++ + TD+ K T E P I PA +
Sbjct: 1897 TTEQEGPPPDGLPEKRITATMDDMLSTRSSTLTDEGTKSTEANKESSKFPFGISPAQS-- 1954
Query: 186 RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFL 245
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+ L
Sbjct: 1955 HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNAIRSLSFVPGNDFEMSKHPGLL 2014
Query: 246 RLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVLV 304
+LG+LIL +H+H R Y C + EWWWD +E +REN LV
Sbjct: 2015 LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCDKV------EWWWDCLEMLRENTLV 2068
Query: 305 SLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEAL 362
+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE L
Sbjct: 2069 TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETL 2128
Query: 363 CKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS 422
KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS +
Sbjct: 2129 SKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA 2188
Query: 423 RTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHL 482
R IA+Q I L+ F+E + +Q + ++ +P TS+DM+RR AR LL L
Sbjct: 2189 RAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-SPPFEPTSVDMMRRAARALLAL 2247
Query: 483 SRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 2248 AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 2286
Score = 44 (20.5 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 17 VDPGASVDMEHGGPPPPQS-LQNGEKNNK 44
V P A+ + G PPPP S L+ E+ +
Sbjct: 5 VAPAAASSL--GNPPPPPSELKKAEQQQR 31
Score = 40 (19.1 bits), Expect = 1.4e-71, Sum P(4) = 1.4e-71
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKL-ENGGE 153
NNK + T K TE + + +T E KL E GGE
Sbjct: 979 NNK-ADGTPK---TESKSKKSSSSTTTNEKITKLYELGGE 1014
Score = 39 (18.8 bits), Expect = 1.4e-71, Sum P(4) = 1.4e-71
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 6 AEPPVPEASGPVDPGASVDMEHGGPPPPQS 35
++PP ++ P S +H PP S
Sbjct: 520 SQPPHQQSQTPYPSQQSTTQQHPQSQPPYS 549
Score = 38 (18.4 bits), Expect = 1.4e-71, Sum P(4) = 1.4e-71
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 595 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 627
Score = 38 (18.4 bits), Expect = 5.7e-70, Sum P(3) = 5.7e-70
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 11 PEASGPVDPGASVDMEHGGPPPPQSLQNG 39
P++S P+D + + G P S Q G
Sbjct: 374 PQSSSPMDQMGKMRPQPYGGTNPYSQQQG 402
>UNIPROTKB|J9NTN3 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:AAEX03001719
Ensembl:ENSCAFT00000044234 Uniprot:J9NTN3
Length = 1899
Score = 708 (254.3 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 161/399 (40%), Positives = 228/399 (57%)
Query: 128 TEGEETVKTDNTKEGEATVKLEN--GGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAK 185
T +E D E T +++ + T++ K T E P I PA +
Sbjct: 1505 TTEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEEGAKSTEATKESSKFPFGISPAQS-- 1562
Query: 186 RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFL 245
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+ L
Sbjct: 1563 HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLL 1622
Query: 246 RLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVLV 304
+LG+LIL +H+H R Y C+ + EWWWD +E +REN LV
Sbjct: 1623 LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTLV 1676
Query: 305 SLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEAL 362
+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE L
Sbjct: 1677 TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETL 1736
Query: 363 CKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS 422
KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS +
Sbjct: 1737 SKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA 1796
Query: 423 RTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHL 482
R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL L
Sbjct: 1797 RAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLAL 1855
Query: 483 SRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 1856 AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 1894
Score = 44 (20.5 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQN 38
QA+ P + P P +S + P PQS Q+
Sbjct: 172 QAQSPYQQQQ-PQQPASSTLSQQAAYPQPQSQQS 204
Score = 40 (19.1 bits), Expect = 3.7e-71, Sum P(3) = 3.7e-71
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKL-ENGGE 153
NNK + T K TE + + +T E KL E GGE
Sbjct: 599 NNK-ADGTPK---TESKSKKSSSSTTTNEKITKLYELGGE 634
Score = 39 (18.8 bits), Expect = 3.6e-69, Sum P(2) = 3.6e-69
Identities = 9/25 (36%), Positives = 9/25 (36%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PPV G E GPPP
Sbjct: 1489 PPVTRKHVTAPEGTPGTTEQEGPPP 1513
Score = 38 (18.4 bits), Expect = 1.6e-70, Sum P(3) = 1.6e-70
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 215 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 247
>UNIPROTKB|E1B925 [details] [associations]
symbol:ARID1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0042921
"glucocorticoid receptor signaling pathway" evidence=IEA]
[GO:0030521 "androgen receptor signaling pathway" evidence=IEA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006337
"nucleosome disassembly" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
GO:GO:0042921 GO:GO:0045893 GO:GO:0030521 GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0016514 OMA:GSQYGPQ GO:GO:0030520
GO:GO:0006337 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:DAAA02006369
EMBL:DAAA02006370 EMBL:DAAA02006371 IPI:IPI01000128
Ensembl:ENSBTAT00000001360 Uniprot:E1B925
Length = 2112
Score = 704 (252.9 bits), Expect = 8.8e-71, Sum P(3) = 8.8e-71
Identities = 161/399 (40%), Positives = 227/399 (56%)
Query: 128 TEGEETVKTDNTKEGEATVKLEN--GGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAK 185
T +E D E T +++ + T++ K E P I PA +
Sbjct: 1718 TAEQEGPPPDGPPEKRITATMDDMLSTRSSTLTEEGAKSVEATKESSKFPFGISPAQS-- 1775
Query: 186 RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFL 245
R + EDE + +DE L + D QD++A+RCI +SN +R+L+FVPGN+ E SK+ L
Sbjct: 1776 HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNTIRSLSFVPGNDFEMSKHPGLL 1835
Query: 246 RLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVLV 304
+LG+LIL +H+H R Y C+ + EWWWD +E +REN LV
Sbjct: 1836 LILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTLV 1889
Query: 305 SLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEAL 362
+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE L
Sbjct: 1890 TLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLETL 1949
Query: 363 CKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMS 422
KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS +
Sbjct: 1950 SKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAA 2009
Query: 423 RTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHL 482
R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL L
Sbjct: 2010 RAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLAL 2068
Query: 483 SRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 2069 AKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 2107
Score = 44 (20.5 bits), Expect = 8.8e-71, Sum P(3) = 8.8e-71
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 5 QAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQN 38
QA+ P + P P +S + P PQS Q+
Sbjct: 383 QAQSPYQQQQ-PQQPASSTLSQQAAYPQPQSQQS 415
Score = 44 (20.5 bits), Expect = 4.3e-69, Sum P(2) = 4.3e-69
Identities = 10/25 (40%), Positives = 10/25 (40%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PPVP G E GPPP
Sbjct: 1702 PPVPRKYVTAVEGTPGTAEQEGPPP 1726
Score = 43 (20.2 bits), Expect = 8.8e-71, Sum P(3) = 8.8e-71
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 83 TIVNSDVHVVKSEDKANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEG 142
T+ N+ + S + G+ K S K+ N +G T K TE + + +T
Sbjct: 781 TMANNSAGMAASPEMM-GLGDVKLTPAS-KMNNKADG--TPK---TESKSKKSSSSTTTN 833
Query: 143 EATVKL-ENGGE 153
E KL E GGE
Sbjct: 834 EKITKLYELGGE 845
Score = 42 (19.8 bits), Expect = 6.9e-69, Sum P(2) = 6.9e-69
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 2 AATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQN 38
+A Q +P + P P + + PPP Q + N
Sbjct: 1222 SAGQGQPQQQQLP-PAQPPPANQQQAAQPPPQQDVYN 1257
Score = 38 (18.4 bits), Expect = 3.7e-70, Sum P(3) = 3.7e-70
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 31 PPPQSLQNGEKNNKXXXXXXXXXXXXXXXDMNV 63
PPPQ L ++ DMN+
Sbjct: 426 PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNL 458
>UNIPROTKB|H0Y488 [details] [associations]
symbol:ARID1A "AT-rich interactive domain-containing
protein 1A" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] GO:GO:0005634
EMBL:AL034380 EMBL:AL512408 HGNC:HGNC:11110 ChiTaRS:ARID1A
InterPro:IPR021906 Pfam:PF12031 PRIDE:H0Y488
Ensembl:ENST00000430799 Bgee:H0Y488 Uniprot:H0Y488
Length = 1182
Score = 707 (253.9 bits), Expect = 2.6e-70, Sum P(2) = 2.6e-70
Identities = 164/400 (41%), Positives = 230/400 (57%)
Query: 128 TEGEETVKTDNTKEGEATVKLENGGEEPSAT---DKAEKETTEKPEVKFVPKIIDPAGNA 184
T +E D E T +++ S+T D A+ K KF P I PA +
Sbjct: 788 TTDQEGPPPDGPPEKRITATMDDMLSTRSSTLTEDGAKSSEAIKESSKF-PFGISPAQS- 845
Query: 185 KRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTF 244
R + EDE + +DE L + D QD++A+RC+ +SN +R+L+FVPGN+ E SK+
Sbjct: 846 -HRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGL 904
Query: 245 LRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXC-CSSLSPQAESEWWWDYMENIRENVL 303
L +LG+LIL +H+H R Y C+ + EWWWD +E +REN L
Sbjct: 905 LLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV------EWWWDCLEMLRENTL 958
Query: 304 VSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEA 361
V+LANISG +DL YPE I P+LDGLLHWAVCP+A+ QDPF + N LSPQRL LE
Sbjct: 959 VTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEAQDPFSTLGPNAVLSPQRLVLET 1018
Query: 362 LCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAM 421
L KL + DNNVDL++ATPP++RLE+L + RFL ++ V RE V LL LA DS
Sbjct: 1019 LSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLA 1078
Query: 422 SRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLH 481
+R IA+Q I L+ F+E + +Q + ++ NP TS+DM+RR AR LL
Sbjct: 1079 ARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ-NPPFEPTSVDMMRRAARALLA 1137
Query: 482 LSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
L++ +N F E RLL + +S +++ V+ +I VL+
Sbjct: 1138 LAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLF 1177
Score = 39 (18.8 bits), Expect = 2.6e-70, Sum P(2) = 2.6e-70
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPP 32
PP P G + GPPP
Sbjct: 772 PPAPRKHVTTAEGTPGTTDQEGPPP 796
>ZFIN|ZDB-GENE-080220-35 [details] [associations]
symbol:arid1aa "AT rich interactive domain 1Aa
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 ZFIN:ZDB-GENE-080220-35 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 EMBL:BX649265
EMBL:CR524825 IPI:IPI00934197 Ensembl:ENSDART00000135930
ArrayExpress:F1QMS8 Bgee:F1QMS8 Uniprot:F1QMS8
Length = 2286
Score = 705 (253.2 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 171/415 (41%), Positives = 238/415 (57%)
Query: 114 ENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKF 173
E+ KE + E++ + + + ++ L+ E T EK+ EK E++
Sbjct: 1879 EHRKEVDRQPSPESSTEKVPDEISDPRDNRPADCLDAASE---GTSHIEKDQ-EKQELEL 1934
Query: 174 V-PKIIDPAGNAK--RRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTF 230
P+ I PA + + R S EDE + +DEA L +S+ QD++ARRCI +SNI+R+L+F
Sbjct: 1935 TTPESIRPAAPSPLLQGRRSVLEDEPHSKDEAPLVTLSEWQDSLARRCICVSNIVRSLSF 1994
Query: 231 VPGNELEFSKNSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEW 290
VPGN+ E SK+ L LLGRL+L +H H R Y SL + + EW
Sbjct: 1995 VPGNDTEMSKHPGLLLLLGRLLLLHHRHPERKQAPLTYEKEEEVD----ESLGSKKD-EW 2049
Query: 291 WWDYMENIRENVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSC 350
WWD +E +REN LV+L+NISG +D Y E I P+LDGLLHWAVCP+A+ QDPFPS
Sbjct: 2050 WWDCLELLRENCLVTLSNISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQDPFPSLGL 2109
Query: 351 N--LSPQRLALEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGV 408
N LSPQRL LE LCKL V DNNVDL++AT P++RLE+L L R + + + V RE V
Sbjct: 2110 NGALSPQRLVLETLCKLSVQDNNVDLILATAPFSRLEKLFGNLVRLVGERKVPVCREMAV 2169
Query: 409 NLLHYLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSM--G 466
LL LA DS +R IA+Q + L+ F+E + Q G+L S
Sbjct: 2170 VLLANLAQGDSMAARAIAVQKASVGNLLGFLEDS---LAATQFQQSQGSLLHMQGSHFEP 2226
Query: 467 TSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLY 521
TS+DM+RR AR LL L++ +N F E RLL L +S +++ V+ +I VL+
Sbjct: 2227 TSVDMMRRAARALLALAKVEENHSEFTLYESRLLDLSVSPLMNSMVSHVICDVLF 2281
Score = 44 (20.5 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 6 AEPPV-PEASGPVDPGASVDMEHGGPPPPQSLQNGE 40
A+ P P S PV AS GP P ++ +
Sbjct: 657 AQSPFSPHTSPPVGSPASASASRSGPLSPTTMPGNQ 692
Score = 41 (19.5 bits), Expect = 9.1e-69, Sum P(2) = 9.1e-69
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 25 MEHGGPPPPQSLQNGEKNNK 44
+E G PPP + K N+
Sbjct: 1078 IERGEDPPPDIMSGDNKKNQ 1097
Score = 40 (19.1 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 13 ASGPVDPGASVDMEHGGPPPPQS 35
+ P P +++ M+ GPP P S
Sbjct: 1543 SKSPYMP-SNIKMQKAGPPVPAS 1564
Score = 37 (18.1 bits), Expect = 4.4e-70, Sum P(3) = 4.4e-70
Identities = 7/41 (17%), Positives = 21/41 (51%)
Query: 115 NNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEP 155
+NK+ + ++ + G +++ T + ++ E+G +P
Sbjct: 1092 DNKKNQPKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKP 1132
Score = 37 (18.1 bits), Expect = 2.4e-69, Sum P(3) = 2.4e-69
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 3 ATQAEPPVPEASGPVD---PGASVDMEHGGPPPPQS 35
A+Q +P P GP P AS P Q+
Sbjct: 502 ASQTQPSYPPGQGPQQQQQPSASQQPPQTPTPASQT 537
Score = 37 (18.1 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 11/54 (20%), Positives = 22/54 (40%)
Query: 98 ANGMTTTKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENG 151
A + T+ P E + KE +K+ E +++ + GE + + G
Sbjct: 8 ATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPARGELQDRADVG 61
>UNIPROTKB|E1BKQ8 [details] [associations]
symbol:Bt.110992 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 GeneTree:ENSGT00550000074575
EMBL:DAAA02027298 EMBL:DAAA02027299 EMBL:DAAA02027300
EMBL:DAAA02027301 EMBL:DAAA02027302 EMBL:DAAA02027303
EMBL:DAAA02027304 EMBL:DAAA02027305 IPI:IPI00923955
Ensembl:ENSBTAT00000003537 Uniprot:E1BKQ8
Length = 1537
Score = 713 (256.0 bits), Expect = 5.0e-70, Sum P(2) = 5.0e-70
Identities = 164/404 (40%), Positives = 234/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
ST +K++ EG+ K AT+ + P A + T+ KF P I
Sbjct: 982 STGRKKDQEGKGDSDEHQEKSIIATID-DVLSARPGALPEDANPGTQTESSKF-PFGIHQ 1039
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDEA L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1040 ARS--HRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1097
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1098 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1152
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1153 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1212
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1213 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1272
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1273 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1331
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1332 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1375
Score = 38 (18.4 bits), Expect = 5.0e-70, Sum P(2) = 5.0e-70
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 287 IERGEEPPPEVFSTGD 302
>UNIPROTKB|F1MKU0 [details] [associations]
symbol:Bt.110992 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0016514 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 OMA:PIGIQGR EMBL:DAAA02027298
EMBL:DAAA02027299 EMBL:DAAA02027300 EMBL:DAAA02027301
EMBL:DAAA02027302 EMBL:DAAA02027303 EMBL:DAAA02027304
EMBL:DAAA02027305 IPI:IPI00923955 Ensembl:ENSBTAT00000061484
Uniprot:F1MKU0
Length = 1628
Score = 713 (256.0 bits), Expect = 6.8e-70, Sum P(2) = 6.8e-70
Identities = 164/404 (40%), Positives = 234/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
ST +K++ EG+ K AT+ + P A + T+ KF P I
Sbjct: 1231 STGRKKDQEGKGDSDEHQEKSIIATID-DVLSARPGALPEDANPGTQTESSKF-PFGIHQ 1288
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDEA L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1289 ARS--HRNIKLLEDEPRSRDEAPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1346
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1347 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1401
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1402 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1461
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1462 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1521
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1522 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1580
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1581 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1624
Score = 38 (18.4 bits), Expect = 6.8e-70, Sum P(2) = 6.8e-70
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 536 IERGEEPPPEVFSTGD 551
>UNIPROTKB|Q8NFD5 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0048096 "chromatin-mediated maintenance of transcription"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR001606 Pfam:PF01388
PROSITE:PS51011 SMART:SM00501 GO:GO:0007399 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003677 GO:GO:0006351 GO:GO:0003713
GO:GO:0016514 eggNOG:NOG12793 Orphanet:1465 HOVERGEN:HBG058196
KO:K11653 GO:GO:0048096 Gene3D:1.10.150.60 InterPro:IPR021906
Pfam:PF12031 SUPFAM:SSF46774 EMBL:AF259792 EMBL:AL355297
EMBL:AL049820 EMBL:AL162578 EMBL:AL591545 EMBL:AJ001216 EMBL:Y08266
EMBL:AF521671 EMBL:AF253515 EMBL:AF468300 EMBL:AB033061
IPI:IPI00015404 IPI:IPI00395617 IPI:IPI00396577 IPI:IPI00742937
RefSeq:NP_059989.2 RefSeq:NP_065783.3 UniGene:Hs.291587
UniGene:Hs.741783 PDB:2CXY PDB:2EH9 PDBsum:2CXY PDBsum:2EH9
ProteinModelPortal:Q8NFD5 SMR:Q8NFD5 IntAct:Q8NFD5
MINT:MINT-1153351 STRING:Q8NFD5 PhosphoSite:Q8NFD5 DMDM:73921720
PaxDb:Q8NFD5 PRIDE:Q8NFD5 Ensembl:ENST00000346085
Ensembl:ENST00000350026 Ensembl:ENST00000367148 GeneID:57492
KEGG:hsa:57492 UCSC:uc003qqn.3 UCSC:uc003qqo.3 UCSC:uc003qqp.3
CTD:57492 GeneCards:GC06P157191 H-InvDB:HIX0006320
H-InvDB:HIX0165033 HGNC:HGNC:18040 HPA:HPA016511 MIM:614556
MIM:614562 neXtProt:NX_Q8NFD5 Orphanet:251056 PharmGKB:PA134909463
OMA:PIGIQGR OrthoDB:EOG4G7BXG EvolutionaryTrace:Q8NFD5
GenomeRNAi:57492 NextBio:63782 ArrayExpress:Q8NFD5 Bgee:Q8NFD5
CleanEx:HS_ARID1B Genevestigator:Q8NFD5 GermOnline:ENSG00000049618
Uniprot:Q8NFD5
Length = 2236
Score = 701 (251.8 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 161/404 (39%), Positives = 231/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S +K+ EG+ + K AT+ + P A + + KF P I
Sbjct: 1839 SAGRKKEQEGKGDSEEQQEKSIIATID-DVLSARPGALPEDANPGPQTESSKF-PFGIQQ 1896
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1897 AKS--HRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1954
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1955 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 2009
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 2010 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 2069
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 2070 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 2129
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 2130 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 2188
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 2189 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 2232
Score = 40 (19.1 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 91 VVKSEDKANGMTTT-KPEETSVKIENNKEGESTVKKENT---EGEETVKTDNTKEGEATV 146
+V S + G+ P E+ + + +G K+E T E + + +T GE
Sbjct: 990 MVNSSAASVGLADMMSPGESKLPLPLKADG----KEEGTPQPESKSKKSSSSTTTGEKIT 1045
Query: 147 KLENGGEEP 155
K+ G EP
Sbjct: 1046 KVYELGNEP 1054
Score = 39 (18.8 bits), Expect = 1.7e-69, Sum P(3) = 1.7e-69
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 2 AATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQ 37
AA Q P A P PG ++ G P P ++
Sbjct: 492 AAQQRSHP---AMSPGTPGPTMGRSQGSPMDPMVMK 524
Score = 38 (18.4 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 1143 IERGEEPPPEVFSTGD 1158
>UNIPROTKB|F1PBJ5 [details] [associations]
symbol:ARID1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0005622 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 OMA:PIGIQGR
EMBL:AAEX03000290 EMBL:AAEX03000291 EMBL:AAEX03000292
EMBL:AAEX03000293 Ensembl:ENSCAFT00000000940 Uniprot:F1PBJ5
Length = 2241
Score = 704 (252.9 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 162/404 (40%), Positives = 230/404 (56%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S +K EG + K AT+ + P A + T+ KF P I
Sbjct: 1844 SAGRKREQEGRGEAEEQQEKSIIATID-DVLSARPGALPEDANPGTQTESGKF-PFGIHQ 1901
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1902 AKS--HRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1959
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1960 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 2014
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 2015 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 2074
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 2075 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 2134
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 2135 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLLHMQP-PPLEPPSVDMMCRAAKA 2193
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 2194 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 2237
Score = 40 (19.1 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 90 HVVKSEDKANGMTTT-KPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKL 148
++V S + G+ P E+ + + +G+ + E + + +T GE K+
Sbjct: 995 NMVNSSAASMGLADMMSPGESKLPMPLKADGKEEGAPQ-PESKSKKSSSSTTTGEKITKV 1053
Query: 149 ENGGEEP 155
G EP
Sbjct: 1054 YELGNEP 1060
>UNIPROTKB|H0Y7H8 [details] [associations]
symbol:ARID1B "AT-rich interactive domain-containing
protein 1B" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
EMBL:AL355297 EMBL:AL049820 EMBL:AL162578 EMBL:AL591545
HGNC:HGNC:18040 EMBL:AL136091 Ensembl:ENST00000414678 Bgee:H0Y7H8
Uniprot:H0Y7H8
Length = 1758
Score = 701 (251.8 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 161/404 (39%), Positives = 231/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S +K+ EG+ + K AT+ + P A + + KF P I
Sbjct: 1361 SAGRKKEQEGKGDSEEQQEKSIIATID-DVLSARPGALPEDANPGPQTESSKF-PFGIQQ 1418
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1419 AKS--HRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1476
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1477 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1531
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1532 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1591
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1592 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1651
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1652 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 1710
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1711 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1754
Score = 38 (18.4 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 665 IERGEEPPPEVFSTGD 680
Score = 37 (18.1 bits), Expect = 2.4e-68, Sum P(2) = 2.4e-68
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 14 SGPVDPGASVDMEHGGPPPPQSLQNG 39
SGP+ P + G PQ Q G
Sbjct: 237 SGPISPASIPGFMAGTQRNPQMAQYG 262
>UNIPROTKB|F1LNP1 [details] [associations]
symbol:F1LNP1 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0003677
GO:GO:0016514 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 IPI:IPI00193175
Ensembl:ENSRNOT00000022939 Uniprot:F1LNP1
Length = 1755
Score = 700 (251.5 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 163/404 (40%), Positives = 231/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
ST KK+ G+ + K AT+ + P A + + KF P I
Sbjct: 1358 STGKKKELAGKGDSEEQPEKSIIATID-DVLSARPGALPEDSNPGPQTESGKF-PFGIQQ 1415
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + + RL EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1416 AKSHRNIRL--LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1473
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1474 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1528
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1529 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1588
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1589 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1648
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L+ F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1649 TLAARAIAVQKGSIGNLIGFLEDGVTMAQYQQSQHTLMHMQP-PPLEPPSVDMMCRAAKA 1707
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1708 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1751
Score = 38 (18.4 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 654 IERGEEPPPEVFSTGD 669
>UNIPROTKB|G3XAA0 [details] [associations]
symbol:ARID1B "AT rich interactive domain 1B (SWI1-like),
isoform CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
Pfam:PF01388 PROSITE:PS51011 SMART:SM00501 GO:GO:0005634
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:CH471051
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
EMBL:AL355297 EMBL:AL049820 EMBL:AL162578 EMBL:AL591545
UniGene:Hs.291587 UniGene:Hs.741783 HGNC:HGNC:18040 EMBL:AL136091
ProteinModelPortal:G3XAA0 SMR:G3XAA0 PRIDE:G3XAA0
Ensembl:ENST00000275248 PhylomeDB:G3XAA0 ArrayExpress:G3XAA0
Bgee:G3XAA0 Uniprot:G3XAA0
Length = 2231
Score = 701 (251.8 bits), Expect = 3.6e-68, Sum P(2) = 3.6e-68
Identities = 161/404 (39%), Positives = 231/404 (57%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
S +K+ EG+ + K AT+ + P A + + KF P I
Sbjct: 1834 SAGRKKEQEGKGDSEEQQEKSIIATID-DVLSARPGALPEDANPGPQTESSKF-PFGIQQ 1891
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + R + EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1892 AKS--HRNIKLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1949
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+LIL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1950 HPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 2004
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 2005 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 2064
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 2065 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 2124
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L++F+E A +QH + ++ P S+DM+ R A+
Sbjct: 2125 ALAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQP-PPLEPPSVDMMCRAAKA 2183
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R +N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 2184 LLAMARVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 2227
Score = 39 (18.8 bits), Expect = 3.6e-68, Sum P(2) = 3.6e-68
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 2 AATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQ 37
AA Q P A P PG ++ G P P ++
Sbjct: 434 AAQQRSHP---AMSPGTPGPTMGRSQGSPMDPMVMK 466
Score = 38 (18.4 bits), Expect = 4.6e-68, Sum P(2) = 4.6e-68
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 1138 IERGEEPPPEVFSTGD 1153
>RGD|708504 [details] [associations]
symbol:Arid1b "AT rich interactive domain 1B (Swi1 like)"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
RGD:708504 GO:GO:0003677 GO:GO:0003700 GO:GO:0005622
eggNOG:NOG12793 HOVERGEN:HBG058196 Gene3D:1.10.150.60
InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
HOGENOM:HOG000232161 OrthoDB:EOG4G7BXG HSSP:Q24573 IPI:IPI00193175
EMBL:AJ440711 UniGene:Rn.214230 UniGene:Rn.228637
ProteinModelPortal:Q8CHN9 SMR:Q8CHN9 STRING:Q8CHN9
PhosphoSite:Q8CHN9 NextBio:624773 Genevestigator:Q8CHN9
Uniprot:Q8CHN9
Length = 1758
Score = 692 (248.7 bits), Expect = 1.7e-67, Sum P(2) = 1.7e-67
Identities = 162/404 (40%), Positives = 229/404 (56%)
Query: 121 STVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATDKAEKETTEKPEVKFVPKIIDP 180
ST KK+ G+ + K AT+ + P A + + KF P I
Sbjct: 1361 STGKKKELAGKGDSEEQPEKSIIATID-DVLSARPGALPEDSNPGPQTESGKF-PFGIQQ 1418
Query: 181 AGNAKRRRLSEYEDESYCRDEASLYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSK 240
A + + RL EDE RDE L ++ QD++A+RCI +SNI+R+L+FVPGN+ E SK
Sbjct: 1419 AKSHRNIRL--LEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSK 1476
Query: 241 NSTFLRLLGRLILAYHEHGLRATKTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRE 300
+ + +LG+ IL +HEH R + Y S + EWWWD +E +R+
Sbjct: 1477 HPGLVPILGKSILLHHEHPERKRAPQTYEKEEDEDKGVACS-----KDEWWWDCLEVLRD 1531
Query: 301 NVLVSLANISGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLA 358
N LV+LANISG +DL Y E I PILDGLLHW VCP+A+ QDPFP+ N LSPQRL
Sbjct: 1532 NTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLV 1591
Query: 359 LEALCKLCVTDNNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAAD 418
LE LCKL + DNNVDL++ATPP++R E+ L R++ ++ V RE + LL LA D
Sbjct: 1592 LETLCKLSIQDNNVDLILATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGD 1651
Query: 419 SAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTART 478
+ +R IA+Q I L+ F+E A +QH + ++ P S+DM+ R A+
Sbjct: 1652 TLAARAIAVQKGSIGNLIGFLEDGVTMAQYQQSQHTLMHMQP-PPLEPPSVDMMCRAAKA 1710
Query: 479 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
LL ++R N+ FL E RLL + +S +L+ VA++I VL+Q
Sbjct: 1711 LLAMARVDQNRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQ 1754
Score = 38 (18.4 bits), Expect = 1.7e-67, Sum P(2) = 1.7e-67
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 25 MEHGGPPPPQSLQNGE 40
+E G PPP+ G+
Sbjct: 661 IERGEEPPPEVFSTGD 676
Score = 37 (18.1 bits), Expect = 2.2e-67, Sum P(2) = 2.2e-67
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 14 SGPVDPGASVDMEHGGPPPPQSLQNG 39
SGP+ P + G PQ Q G
Sbjct: 229 SGPISPASIPGFMAGTQRNPQMAQYG 254
>WB|WBGene00002717 [details] [associations]
symbol:let-526 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0001703 "gastrulation with mouth forming first" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0007413 "axonal fasciculation"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011
SMART:SM00501 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0018991 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0003677 GO:GO:0010171 GO:GO:0040011
GO:GO:0005622 GO:GO:0040035 eggNOG:NOG12793 GO:GO:0007413
GO:GO:0040027 Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031
SUPFAM:SSF46774 GeneTree:ENSGT00550000074575 GO:GO:0001703
EMBL:FO080267 RefSeq:NP_491562.3 PaxDb:P91019 PRIDE:P91019
EnsemblMetazoa:C01G8.9a GeneID:3565337 KEGG:cel:CELE_C01G8.9
CTD:3565337 WormBase:C01G8.9a HOGENOM:HOG000019682
InParanoid:P91019 OMA:CESETEP NextBio:956091 ArrayExpress:P91019
Uniprot:P91019
Length = 1687
Score = 485 (175.8 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 128/393 (32%), Positives = 211/393 (53%)
Query: 148 LENGGEEPSATDKAEKETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDE---SYCRDEASL 204
LE E T + +KE + EV K + A+ LS+ + E ++ R A L
Sbjct: 1118 LETESTETIDTVEVKKEIED--EVAEEKKDVLLMRGARPDELSDCKHEVELAWPRPTA-L 1174
Query: 205 YPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLI-LAYHEHGLRAT 263
P S + + +A R +ALSNILR +FV G+++ ++N L ++GRL+ L EH + ++
Sbjct: 1175 SPKSQAMEELAHRALALSNILRGFSFVAGSDVLMARNEALLFIIGRLLKLNVKEHKI-SS 1233
Query: 264 KTRNYXXXXXXXXXCCSSLSP---QAESEWWWDYME-----------NIRENVLVSLANI 309
K LS +A+ + D ++ +R++ V L ++
Sbjct: 1234 KRPGIVMSAEELKTAPKQLSADEKRAKEKSVLDEVDATTAQMVETANQLRDDAFVMLTHM 1293
Query: 310 SGHIDLDQYPEDISRPILDGLLHWAVCPAAQGQDPFPSSSCNLSPQRLALEALCKLCVTD 369
S ++L P+ I+ PI DGLL W+V + D S C +SP+ +LE +CK+ V +
Sbjct: 1294 SVSLNLVDLPDAIAYPIYDGLLRWSVSRVPEATDS--SIPCPVSPRDYSLEIMCKMVVIE 1351
Query: 370 NNVDLVIATPPYARLERLTYVLTRFLCKNEDQVLREFGVNLLHYLAAADSAMSRTIALQS 429
NVD+ ++T ++R+E+ ++LTR L NE+ REF + +L+ L A A+ A+++
Sbjct: 1352 RNVDMFLSTGSWSRVEQFVHILTRLLTMNEETHYREFAIVILNALCIASEAVCYICAMET 1411
Query: 430 PCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNK 489
I+ L+ FI+ A+QN V HG+ ALRDNP+ MGTS+ MLRR A L L + P
Sbjct: 1412 SAIAHLILFIDSADQNMHQVMQAHGMAALRDNPELMGTSVGMLRRAASMLRLLVKVPKAY 1471
Query: 490 PLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
++++ + RLL MSQ++D +VA +I+ LY+
Sbjct: 1472 KIYMKHQTRLLQFTMSQLMDSRVAGMIADTLYE 1504
Score = 165 (63.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 33/77 (42%), Positives = 50/77 (64%)
Query: 570 LRRVANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMS 629
+ +V HG+ ALRDNP+ MGTS+ MLRR A L L + P ++++ + RLL MS
Sbjct: 1428 MHQVMQAHGMAALRDNPELMGTSVGMLRRAASMLRLLVKVPKAYKIYMKHQTRLLQFTMS 1487
Query: 630 QILDQQVAAIISRVLYQ 646
Q++D +VA +I+ LY+
Sbjct: 1488 QLMDSRVAGMIADTLYE 1504
Score = 57 (25.1 bits), Expect = 1.6e-47, Sum P(2) = 1.6e-47
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 8 PPVPEASGPVDPGASVDMEHGGPPPP 33
PP P GPV PG ++ PPPP
Sbjct: 772 PPYPYPGGPVPPGPP---QNRMPPPP 794
Score = 51 (23.0 bits), Expect = 7.0e-47, Sum P(2) = 7.0e-47
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 4 TQAEPPVPEASGPVDPGASVDMEHGGPPP 32
T +PP P+ PG +H GP P
Sbjct: 666 TSVQPPQPQQPPQGPPGPPGPQQHPGPYP 694
Score = 45 (20.9 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 19/74 (25%), Positives = 29/74 (39%)
Query: 104 TKPEETSVKIENNKEGESTVKKENTEGEETVKTDNTKEGEATVKLENGGEEPSATD-KAE 162
T+P K ++ E EST + E ++ ++ D E + V L G +D K E
Sbjct: 1105 TRPRPVFSKYLDDLETESTETIDTVEVKKEIE-DEVAEEKKDVLLMRGARPDELSDCKHE 1163
Query: 163 KETTEKPEVKFVPK 176
E PK
Sbjct: 1164 VELAWPRPTALSPK 1177
Score = 42 (19.8 bits), Expect = 6.1e-46, Sum P(2) = 6.1e-46
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 2 AATQAEPPVPEA-SGPVDPGASVDMEHGGPPPPQSLQ 37
A++ AE + + SG P +H PPPPQ Q
Sbjct: 169 ASSIAEESLDDKPSGTKMPAQPPPQQH--PPPPQPQQ 203
Score = 40 (19.1 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 11 PEASGPVDPGASVDMEHGGPPP 32
P A PGA G PPP
Sbjct: 707 PPAGFAPPPGAPYGYPPGAPPP 728
Score = 40 (19.1 bits), Expect = 1.0e-45, Sum P(2) = 1.0e-45
Identities = 10/34 (29%), Positives = 13/34 (38%)
Query: 2 AATQAEPPVPEASGPVDPGASVDMEHGGPPPPQS 35
+AT +P AS D + E P P S
Sbjct: 616 SATPDSSTIPSASAAADAQTTTSSETSTPGEPTS 649
>ZFIN|ZDB-GENE-030131-5725 [details] [associations]
symbol:arid1ab "AT rich interactive domain 1Ab
(SWI-like)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001606 Pfam:PF01388 PROSITE:PS51011 SMART:SM00501
ZFIN:ZDB-GENE-030131-5725 GO:GO:0003677 GO:GO:0005622
Gene3D:1.10.150.60 InterPro:IPR021906 Pfam:PF12031 SUPFAM:SSF46774
GeneTree:ENSGT00550000074575 EMBL:CABZ01050711 EMBL:CT027837
IPI:IPI00485842 Ensembl:ENSDART00000084272 Bgee:F1RE50
Uniprot:F1RE50
Length = 2135
Score = 470 (170.5 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 116/284 (40%), Positives = 162/284 (57%)
Query: 92 VKSEDKANGMTTTKPEETSVKIENNKEGESTVK------KENTEGEETVKTDNTKEGEAT 145
V+ K + + T E K++ N EG V+ + + EG+ T + + AT
Sbjct: 1828 VEPRKKVSQILETVTGEAE-KVQTN-EGPQQVQVLASKDQPSLEGKSTTTSSTSTSITAT 1885
Query: 146 VKLENGGEEPSATDKAEK--ETTEKPEVKFVPKIIDPAGNAKRRRLSEYEDESYCRDEAS 203
+ SAT++A + + ++K + F+ I D A + R + EDE + +DE
Sbjct: 1886 IDDVLSARRGSATEEAVRGNQDSDKEKNTFLFGI-DLAQQS--RNIKILEDEPHSKDETP 1942
Query: 204 LYPVSDSQDNIARRCIALSNILRNLTFVPGNELEFSKNSTFLRLLGRLILAYHEHGLRAT 263
L +SD QD +ARRCI +SNI+R+L+F+PGN+LE SK+ L LLGRL+L +H H R
Sbjct: 1943 LCTLSDWQDALARRCICVSNIVRSLSFIPGNDLEMSKHPGLLLLLGRLVLLHHWHPERKQ 2002
Query: 264 KTRNYXXXXXXXXXCCSSLSPQAESEWWWDYMENIRENVLVSLANISGHIDLDQYPEDIS 323
Y +S + + EWWWD +E +REN LV+LANISG +DL YPE I
Sbjct: 2003 APVTYEKEEEED----EGVSCERD-EWWWDCLEVLRENCLVTLANISGQLDLSIYPESIC 2057
Query: 324 RPILDGLLHWAVCPAAQGQDPFPSSSCN--LSPQRLALEALCKL 365
P+LDGLLHWAVCP+A+ DPFP+ N LSPQRL LE L KL
Sbjct: 2058 LPLLDGLLHWAVCPSAEAIDPFPTLGLNGTLSPQRLVLETLSKL 2101
Score = 45 (20.9 bits), Expect = 2.4e-44, Sum P(2) = 2.4e-44
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 3 ATQAEPPVPEASGPVDPGASVDMEHGGPPPPQSLQNG 39
A + +PP GP+D + +H G P S Q G
Sbjct: 295 ANRTQPP-----GPMDQVGKIRGQHYGAGNPYSQQQG 326
Score = 44 (20.5 bits), Expect = 3.0e-44, Sum P(2) = 3.0e-44
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 25 MEHGGPPPPQSLQNGEKNNK 44
+E G PPP N K N+
Sbjct: 1058 IERGEDPPPDFFNNDPKKNQ 1077
Score = 41 (19.5 bits), Expect = 6.2e-44, Sum P(2) = 6.2e-44
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 10 VPEASGPVDPGASVDMEHGGPPPPQSLQNGEKNN 43
V A+G G DM++G P + N +N+
Sbjct: 57 VGNAAGGGGAGGDPDMKNGNGNPSRVNNNNSQND 90
Score = 39 (18.8 bits), Expect = 1.0e-43, Sum P(2) = 1.0e-43
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 4 TQAEPPVPEASGPVDPGASVDMEHGGP---P--PPQSL 36
++ PP P++ P G GGP P PPQ +
Sbjct: 1359 SERRPPGPQSQFPFGFGRDRGPNVGGPNSQPSMPPQMM 1396
Score = 37 (18.1 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 30 PPPPQSL 36
PPPPQ L
Sbjct: 562 PPPPQEL 568
>UNIPROTKB|Q9N6K2 [details] [associations]
symbol:osa "Trithorax group protein osa" species:7240
"Drosophila simulans" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007379 "segment
specification" evidence=ISS] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=ISS] [GO:0046530 "photoreceptor cell
differentiation" evidence=ISS] GO:GO:0005634 GO:GO:0006355
GO:GO:0016055 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
GO:GO:0007379 InterPro:IPR021906 Pfam:PF12031 GO:GO:0046530
GO:GO:0008587 OrthoDB:EOG4MCVF9 EMBL:AF252665 EMBL:AF252666
EMBL:AF252667 EMBL:AF252668 EMBL:AF252669 EMBL:AF252670
EMBL:AF252671 FlyBase:FBgn0041660 Uniprot:Q9N6K2
Length = 324
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 93/110 (84%), Positives = 100/110 (90%)
Query: 413 YLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDML 472
YLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI LR+NPDSMGTSLDML
Sbjct: 1 YLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDML 60
Query: 473 RRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
RR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 61 RRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 110
Score = 306 (112.8 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 37 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 96
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 97 DQQVALIISRVLYQ 110
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 543 TKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTART 602
T VANQHGI LR+NPDSMGTSLDMLRR A + L +PD+ SL M ++ R
Sbjct: 33 TALGVANQHGINYLRENPDSMGTSLDMLRRAAGT--LLHLAKHPDNR--SLFM-QQEQRL 87
Query: 603 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQ 634
L + H L Q+ +AL++S++L Q
Sbjct: 88 LGLVMSH------ILDQQ---VALIISRVLYQ 110
>UNIPROTKB|Q9NGB4 [details] [associations]
symbol:osa "Trithorax group protein osa" species:7245
"Drosophila yakuba" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007379 "segment
specification" evidence=ISS] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=ISS] [GO:0046530 "photoreceptor cell
differentiation" evidence=ISS] GO:GO:0005634 GO:GO:0006355
GO:GO:0016055 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:NOG12793 GO:GO:0007379 InterPro:IPR021906 Pfam:PF12031
GO:GO:0046530 GO:GO:0008587 OrthoDB:EOG4MCVF9 EMBL:AF255314
STRING:Q9NGB4 FlyBase:FBgn0041640 Uniprot:Q9NGB4
Length = 324
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 93/110 (84%), Positives = 100/110 (90%)
Query: 413 YLAAADSAMSRTIALQSPCISLLVAFIEQAEQNALGVANQHGIGALRDNPDSMGTSLDML 472
YLAAADSAM+RT+ALQSPCIS LVAFIEQAEQ ALGVANQHGI LR+NPDSMGTSLDML
Sbjct: 1 YLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDML 60
Query: 473 RRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQILDQQVAAIISRVLYQ 522
RR A TLLHL++HPDN+ LF+QQEQRLL LVMS ILDQQVA IISRVLYQ
Sbjct: 61 RRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQ 110
Score = 306 (112.8 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 61/74 (82%), Positives = 66/74 (89%)
Query: 573 VANQHGIGALRDNPDSMGTSLDMLRRTARTLLHLSRHPDNKPLFLQQEQRLLALVMSQIL 632
VANQHGI LR+NPDSMGTSLDMLRR A TLLHL++HPDN+ LF+QQEQRLL LVMS IL
Sbjct: 37 VANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHIL 96
Query: 633 DQQVAAIISRVLYQ 646
DQQVA IISRVLYQ
Sbjct: 97 DQQVALIISRVLYQ 110
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 41/92 (44%), Positives = 54/92 (58%)
Query: 543 TKKSVANQHGIGALRDNPDSMGTSLDMLRRVANQHGIGALRDNPDSMGTSLDMLRRTART 602
T VANQHGI LR+NPDSMGTSLDMLRR A + L +PD+ SL M ++ R
Sbjct: 33 TALGVANQHGINYLRENPDSMGTSLDMLRRAAGT--LLHLAKHPDNR--SLFM-QQEQRL 87
Query: 603 LLHLSRHPDNKPLFLQQEQRLLALVMSQILDQ 634
L + H L Q+ +AL++S++L Q
Sbjct: 88 LGLVMSH------ILDQQ---VALIISRVLYQ 110
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 655 631 0.00091 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 614 (65 KB)
Total size of DFA: 317 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 68.67u 0.15s 68.82t Elapsed: 00:00:05
Total cpu time: 68.68u 0.15s 68.83t Elapsed: 00:00:05
Start: Thu Aug 15 11:13:04 2013 End: Thu Aug 15 11:13:09 2013