BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10180
(2211 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XTZ|A Chain A, Crystal Structure Of The S. Cerevisiae
D-Ribose-5-Phosphate Isomerase: Comparison With The
Archeal And Bacterial Enzymes
Length = 264
Score = 117 bits (293), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 35 KIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKI 94
K +C+PT FQ+R LIL N + LG +E +P + DGADEVDENL LIKGGG CL QEK+
Sbjct: 72 KFICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQLIKGGGACLFQEKL 131
Query: 95 VASCTPKLVIIADHTKQS-KNLGDRYKKGIPIEVIPLAYVPVQKKI 139
V++ +++AD K+S K+LG +++G+PIE++P +YV V+ +
Sbjct: 132 VSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDL 177
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Query: 298 KKLPKDLQDLMDSA-TRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEGDS 356
K LPK+ +D + S+ GV+ S GS + S ++ ++ +A ++ VLWR++G+
Sbjct: 5 KPLPKEXEDFVQSSGENGVVVFSLGSXV--SNXTEERANVIASALAQIPQKVLWRFDGNK 62
Query: 357 IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHV 416
+ L N + KWIPQ D+L HP R FI+HGG N EAI++GIP +G+P + DQ ++
Sbjct: 63 PDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNI 122
Query: 417 RHIVDLGAGVELSYFNITLESIAWATSIVLSNP 449
H GA V + + + + A V+++P
Sbjct: 123 AHXKARGAAVRVDFNTXSSTDLLNALKRVINDP 155
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 1061 LPEDLKQILDDAHE-GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLG 1119
LP++ + + + E G + FSLGS + T + + + A ++ KV+W++ G
Sbjct: 7 LPKEXEDFVQSSGENGVVVFSLGSXVSNXTEERANV--IASALAQIPQKVLWRFDGNKPD 64
Query: 1120 NVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
+ N L W PQ +L HP + FITHGG N EA++ GIP + IP FADQ N
Sbjct: 65 TLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNIAH 124
Query: 1180 AERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKD 1225
+ G V + S L A+ V D YKE SRI D
Sbjct: 125 XKARGAAVRVDFNTXSSTDLLNALKRVINDPSYKENVXKLSRIQHD 170
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 63/141 (44%), Gaps = 3/141 (2%)
Query: 1451 AATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNXXXXX 1510
+ NG ++FSLGS ++ T E N + ++ +LW++ G L N
Sbjct: 18 SGENGVVVFSLGSXVSNXT--EERANVIASALAQIPQ-KVLWRFDGNKPDTLGLNTRLYK 74
Query: 1511 XXXXXXXLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFL 1570
L HP + FITHGG + E + +G+P V IP FADQ N G V +
Sbjct: 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNIAHXKARGAAVRV 134
Query: 1571 KITNLTSEALEWAITTVIGDP 1591
+S L A+ VI DP
Sbjct: 135 DFNTXSSTDLLNALKRVINDP 155
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 5/138 (3%)
Query: 2051 NGNLSLPEDIQKTLDSASQ-GFILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWIW 2109
N LP++ + + S+ + G +++SLGS + + T + A + ++ K++W +
Sbjct: 2 NAAKPLPKEXEDFVQSSGENGVVVFSLGSXVSNXT--EERANVIASALAQIPQ-KVLWRF 58
Query: 2110 NGQQVTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYD 2169
+G + L + ++ +W+PQ +L HP + FITHGG EA++ G+P V IP F D
Sbjct: 59 DGNKPDTLGLNT-RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFAD 117
Query: 2170 QFQNAAKAVEFGLGIELS 2187
Q N A G + +
Sbjct: 118 QPDNIAHXKARGAAVRVD 135
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 1622 DNIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRN 1664
++++ HP + FITHGG N EAI+ GIP + IP FADQ N
Sbjct: 79 NDLLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDN 121
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 1828 LKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
L HP + FITHGG EA++ G+P V IP F DQ N A G + +
Sbjct: 81 LLGHPKTRAFITHGGANGIYEAIYHGIPXVGIPLFADQPDNIAHXKARGAAVRV 134
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 599 CNACRIRPWDLKQILDDAHE-GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKW 657
NA + P + + + + E G + FSLGS + T + + + A ++ KV+W++
Sbjct: 1 SNAAKPLPKEXEDFVQSSGENGVVVFSLGSXVSNXTEERANV--IASALAQIPQKVLWRF 58
Query: 658 SGQDLGNVPRNVILKPWAPQIPVLGH 683
G + N L W PQ +LGH
Sbjct: 59 DGNKPDTLGLNTRLYKWIPQNDLLGH 84
>pdb|3IXQ|A Chain A, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
pdb|3IXQ|B Chain B, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
pdb|3IXQ|C Chain C, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
pdb|3IXQ|D Chain D, Structure Of Ribose 5-Phosphate Isomerase A From
Methanocaldococcus Jannaschii
Length = 226
Score = 97.8 bits (242), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/129 (42%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 28 RIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDEN-LVLIKGGG 86
RI+ E+L + +PTSF+A+ L ++ + L L+ + D+ DGADEV+E L LIKGGG
Sbjct: 42 RIREEELTVFGIPTSFEAKMLAMQYEIPLVTLDEY-DVDIAFDGADEVEETTLFLIKGGG 100
Query: 87 GCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQ 146
GC TQEKIV + V++ D +K K LG+++ IP+EVIP AY V + + + GG+
Sbjct: 101 GCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFP--IPVEVIPSAYRVVIRALSEM-GGE 157
Query: 147 APVRMAKSK 155
A +R+ K
Sbjct: 158 AVIRLGDRK 166
>pdb|2F8M|A Chain A, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
pdb|2F8M|B Chain B, Ribose 5-Phosphate Isomerase From Plasmodium Falciparum
Length = 244
Score = 83.2 bits (204), Expect = 2e-15, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 29 IKAEKLK-IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGG 87
+K+ KLK +VC+PTS K + L LE H ++ IDG DE+D NL LIKG GG
Sbjct: 50 LKSGKLKDVVCIPTSIDTELKARKLGIPLTTLEKHSNIDITIDGTDEIDLNLNLIKGRGG 109
Query: 88 CLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQK---KIQTIFG 144
L +EK+VAS + L+II D +K N G +PIE++ Y + + KI T+ G
Sbjct: 110 ALVREKLVASSSSLLIIIGDESKLCTN-GLGMTGAVPIEILTFGYEKIIENLLKIYTLKG 168
Query: 145 GQAPVRMAKSKAVIGEIWFAQEALAVFGHKFQAPIIGLISYGTPHTVST 193
+R GEI+ + F PI L+ T ++T
Sbjct: 169 CTYKIRKRN-----GEIFITDNKNYIVDFFFTEPIQDLLETCTRIKMTT 212
>pdb|3HHE|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
pdb|3HHE|B Chain B, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Bartonella Henselae
Length = 255
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGG 85
ER+ A L++ CV TS + QL K + + LE P+L IDGADE+ + LIKGG
Sbjct: 61 GERV-ANGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGG 119
Query: 86 GGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAY----VPVQKKIQT 141
GG L EKIVAS + + +IAD TK K LG +PIEV P + ++K
Sbjct: 120 GGALLHEKIVASASRAMFVIADETKMVKTLG---AFALPIEVNPFGIHATRIAIEKAADN 176
Query: 142 I-FGGQAPVRM 151
+ G+ +RM
Sbjct: 177 LGLSGEITLRM 187
>pdb|1LK5|A Chain A, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
pdb|1LK5|B Chain B, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
pdb|1LK5|C Chain C, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
pdb|1LK5|D Chain D, Structure Of The D-Ribose-5-Phosphate Isomerase From
Pyrococcus Horikoshii
pdb|1LK7|A Chain A, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
pdb|1LK7|B Chain B, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
pdb|1LK7|C Chain C, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
pdb|1LK7|D Chain D, Structure Of D-Ribose-5-Phosphate Isomerase From In
Complex With Phospho-Erythronic Acid
Length = 229
Score = 80.9 bits (198), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 28 RIKAEKLK------IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVL 81
++ EKLK IV VPTS+QA+ L +++++ + L+ + +DGADEVD NL L
Sbjct: 37 KLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNL 96
Query: 82 IKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQT 141
IKG G LT EKI+ +++ D K L K +PIEVIP A+ + +++ +
Sbjct: 97 IKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQ--KMPVPIEVIPQAWKAIIEEL-S 153
Query: 142 IFGGQAPVRMAKSK 155
IF +A +RM +K
Sbjct: 154 IFNAKAELRMGVNK 167
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 315 VIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNV--------HI 366
V+Y+SFGS++ P T L + G +W + GD E LP I
Sbjct: 275 VVYISFGSVVTPPPHE---LTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKI 331
Query: 367 RKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSH---VRHIVDLG 423
W PQ ++L H + +F++H G NS LE I G+P+I PF+GDQ + ++++G
Sbjct: 332 VAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIG 391
Query: 424 AGVELSYFNITLESIAWATSIVLSNPRSA 452
GV+ +T ESI A + +S+ +
Sbjct: 392 VGVDNGV--LTKESIKKALELTMSSEKGG 418
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 123/286 (43%), Gaps = 55/286 (19%)
Query: 982 IQNVYYAWVRLIFGRIEYHILDNQVASF-VGPGIPPL------ESLFRN--VSFAFLYSN 1032
+ +VY +R G E H V S V PG P L E + ++ V FA +
Sbjct: 153 LTHVYTDLIREKTGSKEVH----DVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHK 208
Query: 1033 AALNYPFPNTPNIEHVGGIH--IE-----RYK--------NTTLPEDLKQILD------- 1070
L P N I IH IE ++K N T P+ +++ D
Sbjct: 209 MGLELPRANAVAINSFATIHPLIENELNSKFKLLLNVGPFNLTTPQ--RKVSDEHGCLEW 266
Query: 1071 -DAHE--GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGNVPRNVIL 1127
D HE ++ S GSV+ P P L L + + + +W + G +P+ +
Sbjct: 267 LDQHENSSVVYISFGSVVTPP---PHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLE 323
Query: 1128 K--------PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
+ WAPQ+ +L H + +F+TH G NS LE + G+P+I+ P+F DQ N +L
Sbjct: 324 RTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTIL 383
Query: 1180 AER-FGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILK 1224
E GV + N L++ S+ A+ + + + R +I+K
Sbjct: 384 TESVLEIGVGVDNGVLTKESIKKALELTMSSEK---GGIMRQKIVK 426
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 101/229 (44%), Gaps = 43/229 (18%)
Query: 2003 QFGANVLPSVESLLRNISLSFVCT--DVGLEYPRAQSGNIVPIGGIHI----ERNG---- 2052
+ A+ LP E ++++I + F +GLE PRA + I IH E N
Sbjct: 184 ELKASDLP--EGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKL 241
Query: 2053 -------NLSLPE-------DIQKTLDSASQGFILY-SLGSIMKSETAPDTLARTLVETF 2097
NL+ P+ + LD ++Y S GS++ T P L E+
Sbjct: 242 LLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVV---TPPPHELTALAESL 298
Query: 2098 SKFENYKIIWIWNGQQVTELPSHVVQ-------IKQWVPQIPILAHPNCKLFITHGGLKS 2150
+ + IW + G +LP ++ I W PQ+ IL H + +F+TH G S
Sbjct: 299 EEC-GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNS 357
Query: 2151 QIEAVHFGVPMVIIPYFYDQFQN---AAKAVEFGLGIELSNKNLTVESL 2196
+E + GVPM+ P+F DQ N +E G+G++ N LT ES+
Sbjct: 358 VLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--NGVLTKESI 404
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 1449 LDAATNGFILF-SLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNXX 1507
LD N +++ S GSV+TP PP L L + + +W + G P LP+
Sbjct: 267 LDQHENSSVVYISFGSVVTP---PPHELTALAESLEECG-FPFIWSFRGDPKEKLPKGFL 322
Query: 1508 XXXXXX--------XXXXLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAM 1559
L H + +F+TH G +S LE + GVP+++ PFF DQ N +
Sbjct: 323 ERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTI 382
Query: 1560 ---KGVEFGFGVFLKITNLTSEALEWAITTVIGDPRG 1593
+E G GV + LT E+++ A+ + +G
Sbjct: 383 LTESVLEIGVGVDNGV--LTKESIKKALELTMSSEKG 417
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 1624 IMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAE 1669
I+ H + +F+TH G NS LE I G+P+I+ P+F DQ N +L E
Sbjct: 340 ILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE 385
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 1818 MVAYLLIRKILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQN---AAKAVE 1874
+VA+ +ILK H + +F+TH G S +E + GVPM+ P+F DQ N +E
Sbjct: 331 IVAWAPQVEILK-HSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389
Query: 1875 FGLGIE 1880
G+G++
Sbjct: 390 IGVGVD 395
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 13/85 (15%)
Query: 615 DAHE--GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGNVPRNVILK 672
D HE ++ S GSV+ P P L L + + + +W + G +P+ + +
Sbjct: 268 DQHENSSVVYISFGSVVTPP---PHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLER 324
Query: 673 --------PWAPQIPVLGHFGPCLF 689
WAPQ+ +L H +F
Sbjct: 325 TKTKGKIVAWAPQVEILKHSSVGVF 349
>pdb|1UJ5|A Chain A, Crystal Structure Of Thermus Thermophilus
Ribose-5-Phosphate Isomerase Complexed With
Ribose-5-Phosphate
Length = 227
Score = 79.7 bits (195), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 6/127 (4%)
Query: 26 AERIKAEKLK-IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKG 84
A R++ +LK +V VPTS +L + + L DL + IDGADE+ L LIKG
Sbjct: 42 ARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPPE-GVDLAIDGADEIAPGLALIKG 100
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFG 144
GG L +EKIV + ++IADHTK+ LG + +P+E++P Y K I + G
Sbjct: 101 MGGALLREKIVERVAKEFIVIADHTKKVPVLG---RGPVPVEIVPFGYRATLKAIADL-G 156
Query: 145 GQAPVRM 151
G+ +RM
Sbjct: 157 GEPELRM 163
>pdb|1UJ4|A Chain A, Crystal Structure Of Thermus Thermophilus
Ribose-5-phosphate Isomerase
pdb|1UJ6|A Chain A, Crystal Structure Of Thermus Thermophilus
Ribose-5-Phosphate Isomerase Complexed With
Arabinose-5-Phosphate
Length = 227
Score = 78.2 bits (191), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 26 AERIKAEKLK-IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKG 84
A R++ +LK +V VPTS +L + + L DL + IDGADE+ L LIKG
Sbjct: 42 ARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPPE-GVDLAIDGADEIAPGLALIKG 100
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFG 144
GG L +EKIV + ++IADHTK+ LG + +P+E++P Y K I + G
Sbjct: 101 XGGALLREKIVERVAKEFIVIADHTKKVPVLG---RGPVPVEIVPFGYRATLKAIADL-G 156
Query: 145 GQAPVR 150
G+ +R
Sbjct: 157 GEPELR 162
>pdb|3U7J|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Burkholderia Thailandensis
pdb|3UW1|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Burkholderia Thailandensis With Ribose-5-Phosphate
Length = 239
Score = 73.2 bits (178), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 39 VPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASC 98
V +S + + + + + DL L +DGADE+DE+ +IKGGGG LT+EKIVAS
Sbjct: 62 VSSSVATTERLKSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGALTREKIVASV 121
Query: 99 TPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPVRMAK 153
V IAD +K+ LG + +P+EV+P+A + +++ + G PV K
Sbjct: 122 AETFVCIADASKRVAMLG---QFPLPVEVVPMARTAIGRRLAAL--GGVPVLRVK 171
>pdb|1M0S|A Chain A, Northeast Structural Genomics Consortium (Nesg Id Ir21)
pdb|1M0S|B Chain B, Northeast Structural Genomics Consortium (Nesg Id Ir21)
Length = 219
Score = 71.6 bits (174), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 13 SGAVVNML--DFGSGAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVID 70
SG+ VN G+ ++I+ V S ++ +L+ K + + + L +D
Sbjct: 28 SGSTVNCFIEALGTIKDKIQG------AVAASKESEELLRKQGIEVFNANDVSSLDIYVD 81
Query: 71 GADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPL 130
GADE++ ++IKGGG LT+EKIVA+ K + I D +KQ LG + +P+EVIP+
Sbjct: 82 GADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFP--LPVEVIPM 139
Query: 131 AYVPVQKKIQTIFG 144
A V +K+ + G
Sbjct: 140 ARSQVGRKLAALGG 153
>pdb|1KS2|A Chain A, Crystal Structure Analysis Of The Rpia, Structural
Genomics, Protein Ec1268.
pdb|1KS2|B Chain B, Crystal Structure Analysis Of The Rpia, Structural
Genomics, Protein Ec1268
Length = 219
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 58 DLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGD 117
DL L +DGADE++ + IKGGG LT+EKI+AS K + IAD +KQ LG
Sbjct: 69 DLNEVDSLGIYVDGADEINGHXQXIKGGGAALTREKIIASVAEKFICIADASKQVDILG- 127
Query: 118 RYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPVR 150
K +P+EVIP A V +++ + GG+ R
Sbjct: 128 --KFPLPVEVIPXARSAVARQLVKL-GGRPEYR 157
>pdb|1LKZ|A Chain A, Crystal Structure Of D-Ribose-5-Phosphate Isomerase (Rpia)
From Escherichia Coli.
pdb|1LKZ|B Chain B, Crystal Structure Of D-Ribose-5-Phosphate Isomerase (Rpia)
From Escherichia Coli.
pdb|1O8B|A Chain A, Structure Of Escherichia Coli Ribose-5-Phosphate
Isomerase, Rpia, Complexed With Arabinose-5-Phosphate.
pdb|1O8B|B Chain B, Structure Of Escherichia Coli Ribose-5-Phosphate
Isomerase, Rpia, Complexed With Arabinose-5-Phosphate
Length = 219
Score = 66.2 bits (160), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/93 (41%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 58 DLETHPDLSCVIDGADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGD 117
DL L +DGADE++ + IKGGG LT+EKI+AS K + IAD +KQ LG
Sbjct: 69 DLNEVDSLGIYVDGADEINGHXQXIKGGGAALTREKIIASVAEKFICIADASKQVDILG- 127
Query: 118 RYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPVR 150
K +P+EVIP A V +++ + GG+ R
Sbjct: 128 --KFPLPVEVIPXARSAVARQLVKL-GGRPEYR 157
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 65.9 bits (159), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 2116 ELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAA 2175
E+P +V ++ QWVPQ+ IL + FITH G+ S +EA+ VPMV +P +Q NA
Sbjct: 302 EVPPNV-EVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAE 358
Query: 2176 KAVEFGLGIELSNKNLTVESL 2196
+ VE GLG + +T E L
Sbjct: 359 RIVELGLGRHIPRDQVTAEKL 379
Score = 63.5 bits (153), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHI 419
+P NV + +W+PQ D+L + FI+H G+ S +EA+ +P++ VP +Q + I
Sbjct: 303 VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI 360
Query: 420 VDLGAGVELSYFNITLESIAWATSIVLSNP 449
V+LG G + +T E + A V S+P
Sbjct: 361 VELGLGRHIPRDQVTAEKLREAVLAVASDP 390
Score = 62.0 bits (149), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 1117 DLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRN 1176
DLG VP NV + W PQ+ +L + FITH G+ S +EA+ +P++ +P A+Q N
Sbjct: 299 DLGEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMN 356
Query: 1177 ALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMA 1218
A G G + ++ L A+ V +D E+ A
Sbjct: 357 AERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAA 398
Score = 54.7 bits (130), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 1526 FITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAIT 1585
FITH G+ S +E ++ VP+V +P A+Q NA + VE G G + +T+E L A+
Sbjct: 325 FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVL 384
Query: 1586 TVIGDP 1591
V DP
Sbjct: 385 AVASDP 390
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLG 1878
FITH G+ S +EA+ VPMV +P +Q NA + VE GLG
Sbjct: 325 FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLG 366
Score = 38.9 bits (89), Expect = 0.028, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
FITH G+ S +EA+ +P++ +P A+Q NA G G
Sbjct: 325 FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLG 366
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 1077 IWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGNV--PRNVILK------ 1128
++ S G+V P + V L++ A +V + WS +D V P + K
Sbjct: 274 VYISFGTVTTPPPAEVVALSEALEA-----SRVPFIWSLRDKARVHLPEGFLEKTRGYGM 328
Query: 1129 --PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAER-FGF 1185
PWAPQ VLAH F+TH G NS E+V G+P+I P+F DQ N + E
Sbjct: 329 VVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEI 388
Query: 1186 GVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKDRLRSPLDTA 1234
GV + +++ L + + + K+ L++ LR+ +TA
Sbjct: 389 GVRIEGGVFTKSGLMSCFDQILSQEKGKK--------LRENLRALRETA 429
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 14/140 (10%)
Query: 304 LQDLMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEGDSIENLP-- 361
LQ L + V+Y+SFG++ P + L A + + +W + +LP
Sbjct: 262 LQWLKERKPTSVVYISFGTVTTPP---PAEVVALSEALEASRVPFIWSLRDKARVHLPEG 318
Query: 362 ------GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSH 415
G + W PQ +VLAH F++H G NS E++ G+P+I PF+GDQ +
Sbjct: 319 FLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLN 378
Query: 416 ---VRHIVDLGAGVELSYFN 432
V ++++G +E F
Sbjct: 379 GRMVEDVLEIGVRIEGGVFT 398
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 2127 WVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVE--FGLGI 2184
W PQ +LAH F+TH G S E+V GVP++ P+F DQ N + VE +G+
Sbjct: 332 WAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLN-GRMVEDVLEIGV 390
Query: 2185 ELSNKNLTVESLGSLVSTIQIQE 2207
+ T L S I QE
Sbjct: 391 RIEGGVFTKSGLMSCFDQILSQE 413
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 19/130 (14%)
Query: 1457 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNXXXXXX----- 1511
+ S G+V TP PP + L + + S + +W + LP
Sbjct: 274 VYISFGTVTTP---PPAEVVALSEAL-EASRVPFIWSLRDKARVHLPEGFLEKTRGYGMV 329
Query: 1512 ---XXXXXXLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMK-------G 1561
LAH F+TH G +S E+V GVP++ PFF DQ N G
Sbjct: 330 VPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIG 389
Query: 1562 VEFGFGVFLK 1571
V GVF K
Sbjct: 390 VRIEGGVFTK 399
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 1623 NIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAE 1669
++ H F+TH G NS E++ G+P+I P+F DQ N + E
Sbjct: 337 EVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE 383
Score = 37.7 bits (86), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 1830 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA---AKAVEFGLGIE 1880
AH F+TH G S E+V GVP++ P+F DQ N +E G+ IE
Sbjct: 340 AHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393
>pdb|4GMK|A Chain A, Crystal Structure Of Ribose 5-Phosphate Isomerase From The
Probiotic Bacterium Lactobacillus Salivarius Ucc118
pdb|4GMK|B Chain B, Crystal Structure Of Ribose 5-Phosphate Isomerase From The
Probiotic Bacterium Lactobacillus Salivarius Ucc118
Length = 228
Score = 63.9 bits (154), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGG 85
+R+ E L IV V TS + + +V+ D++ + IDGADE+ + IKGG
Sbjct: 41 GKRVNEEGLDIVGVTTSIRTAEQAKSLGIVIKDIDEVDHIDLTIDGADEISSDFQGIKGG 100
Query: 86 GGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQ 140
G L EKIVA+ + K + I D +K +LG + +P+EVIP V K+ +
Sbjct: 101 GAALLYEKIVATKSNKNMWIVDESKMVDDLG---QFPLPVEVIPYGSGTVFKRFE 152
>pdb|3KWM|A Chain A, Crystal Structure Of Ribose-5-Isomerase A
pdb|3KWM|B Chain B, Crystal Structure Of Ribose-5-Isomerase A
pdb|3KWM|C Chain C, Crystal Structure Of Ribose-5-Isomerase A
pdb|3KWM|D Chain D, Crystal Structure Of Ribose-5-Isomerase A
pdb|4IO1|A Chain A, Crystal Structure Of Ribose-5-isomerase A From Francisella
Tularensis
pdb|4IO1|B Chain B, Crystal Structure Of Ribose-5-isomerase A From Francisella
Tularensis
Length = 224
Score = 63.9 bits (154), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 32 EKLKIVCVPTSFQARQL-ILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCLT 90
+K+K V + R+L L ++V DL ++ IDGADE + + LIKGGG LT
Sbjct: 50 DKIKTVVSSSEDSTRKLKALGFDVV--DLNYAGEIDLYIDGADECNNHKELIKGGGAALT 107
Query: 91 QEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPVR 150
+EKI + K + I D +K+ LG+ +PIEVIP+A + ++I + GGQ R
Sbjct: 108 REKICVAAAKKFICIIDESKKVNTLGNF---PLPIEVIPMARSYIARQIVKL-GGQPVYR 163
>pdb|3ENQ|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase A From Vibrio Vulnificus Yj016
pdb|3ENQ|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase A From Vibrio Vulnificus Yj016
pdb|3ENV|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
pdb|3ENV|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
pdb|3ENW|A Chain A, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
pdb|3ENW|B Chain B, Substrate And Inhibitor Complexes Of Ribose 5-Phosphate
Isomerase From Vibrio Vulnificus Yj016
Length = 235
Score = 61.6 bits (148), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 13 SGAVVN-MLD-FGSGAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVID 70
+G+ VN +D G+ +E IK V +S + + + + + D L +D
Sbjct: 45 TGSTVNHFIDALGTMSEEIKG------AVSSSVASTEKLEALGIKIFDCNEVASLDIYVD 98
Query: 71 GADEVDENLVLIKGGGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPL 130
GADE++ + +IKGGG LT+EKIVA+ K + I D TK LG +P+EVIP+
Sbjct: 99 GADEINADREMIKGGGAALTREKIVAAIADKFICIVDGTKAVDVLG---TFPLPVEVIPM 155
Query: 131 AYVPVQKKIQTIFG 144
A V +++ + G
Sbjct: 156 ARSYVARQLVKLGG 169
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1130 WAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNAL-LAERFGFGVT 1188
WAPQ+ VLAH F++H G NS LE++ FG+P++T P +A+Q NA L + +G G+
Sbjct: 339 WAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLG 398
Query: 1189 LR 1190
LR
Sbjct: 399 LR 400
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 297 NKKLPKDLQDLM-----DSATRGVIYVSFGSL---IRPSRMSDSMRTLLVTAFSRTGLTV 348
N KL + DL+ + + V+++ FGS+ PS++ + + +G+
Sbjct: 255 NPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIRE-----IALGLKHSGVRF 309
Query: 349 LWRYEGDS-------IE--NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY 399
LW + +E L G I W PQ +VLAH F+SH G NS LE++ +
Sbjct: 310 LWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWF 369
Query: 400 GIPIIGVPFYGD-QLSHVRHIVDLGAGVEL 428
G+PI+ P Y + QL+ R + + G G+ L
Sbjct: 370 GVPILTWPIYAEQQLNAFRLVKEWGVGLGL 399
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ+ +LAH F++H G S +E++ FGVP++ P + +Q NA + V E+G+
Sbjct: 336 ICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 395
Query: 2183 GIEL 2186
G+ L
Sbjct: 396 GLGL 399
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1518 LAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGV-EFGFGVFLKI 1572
LAH F++H G +S LE++ +GVP++T P +A+Q NA + V E+G G+ L++
Sbjct: 346 LAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 1623 NIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNAL-LAERFGFG 1674
++ H F++H G NS LE++ FG+P++T P +A+Q NA L + +G G
Sbjct: 344 EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 396
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 1830 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIEL 1881
AH F++H G S +E++ FGVP++ P + +Q NA + V E+G+G+ L
Sbjct: 347 AHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGL 399
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1130 WAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNAL-LAERFGFGVT 1188
WAPQ+ VLAH F++H G NS LE++ FG+P++T P +A+Q NA L + +G G+
Sbjct: 339 WAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLG 398
Query: 1189 LR 1190
LR
Sbjct: 399 LR 400
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 297 NKKLPKDLQDLM-----DSATRGVIYVSFGSL---IRPSRMSDSMRTLLVTAFSRTGLTV 348
N KL + DL+ + + V+++ FGS+ PS++ + + +G+
Sbjct: 255 NPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIRE-----IALGLKHSGVRF 309
Query: 349 LWRYEGDS-------IE--NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY 399
LW + +E L G I W PQ +VLAH F+SH G NS LE++ +
Sbjct: 310 LWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWF 369
Query: 400 GIPIIGVPFYGD-QLSHVRHIVDLGAGVEL 428
G+PI+ P Y + QL+ R + + G G+ L
Sbjct: 370 GVPILTWPIYAEQQLNAFRLVKEWGVGLGL 399
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ+ +LAH F++H G S +E++ FGVP++ P + +Q NA + V E+G+
Sbjct: 336 ICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 395
Query: 2183 GIEL 2186
G+ L
Sbjct: 396 GLGL 399
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 1518 LAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGV-EFGFGVFLKI 1572
LAH F++H G +S LE++ +GVP++T P +A+Q NA + V E+G G+ L++
Sbjct: 346 LAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 1623 NIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNAL-LAERFGFG 1674
++ H F++H G NS LE++ FG+P++T P +A+Q NA L + +G G
Sbjct: 344 EVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 396
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 1830 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIEL 1881
AH F++H G S +E++ FGVP++ P + +Q NA + V E+G+G+ L
Sbjct: 347 AHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGL 399
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And
O-glucosyltransferase Involved In Xenobiotic Metabolism
In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N- And
O-Glucosyltransferase Involved In Xenobiotic Metabolism
In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N- And
O-Glucosyltransferase Involved In Xenobiotic Metabolism
In Plants
Length = 480
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 1123 RNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
R ++ WAPQ VLAHP+ F+TH G NS LE+V GIP+I P +A+Q NA+L
Sbjct: 339 RGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 369 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQ 412
W PQ VLAHP+ F++H G NS LE++ GIP+I P Y +Q
Sbjct: 346 WAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 2127 WVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA 2174
W PQ +LAHP+ F+TH G S +E+V G+P++ P + +Q NA
Sbjct: 346 WAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNA 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 1623 NIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALL 1667
++ HP+ F+TH G NS LE++ GIP+I P +A+Q NA+L
Sbjct: 351 QVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVL 395
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 1518 LAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAM 1559
LAHP+ F+TH G +S LE+V G+P++ P +A+Q NA+
Sbjct: 353 LAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394
Score = 37.7 bits (86), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 1830 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA 1869
AHP+ F+TH G S +E+V G+P++ P + +Q NA
Sbjct: 354 AHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNA 393
>pdb|3L7O|A Chain A, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Streptococcus Mutans Ua159
pdb|3L7O|B Chain B, Crystal Structure Of Ribose-5-Phosphate Isomerase A From
Streptococcus Mutans Ua159
Length = 225
Score = 58.2 bits (139), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGG 85
R++ E L+++ V TS + + L ++ + +DGADEVD N IKGG
Sbjct: 38 GRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGG 97
Query: 86 GGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVI 128
GG L EKIV + T + + D +K LG +P+EV+
Sbjct: 98 GGALLMEKIVGTLTKDYIWVVDESKMVDTLG---AFRLPVEVV 137
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 57.8 bits (138), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 2066 SASQGFILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQQVT-----ELPSH 2120
+ ++ +L SLGS + A R V F + ++ + G++VT ELP +
Sbjct: 229 AGAEKVVLVSLGSAFTKQPA---FYRECVRAFGNLPGWHLV-LQIGRKVTPAELGELPDN 284
Query: 2121 VVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEF 2180
V ++ WVPQ+ IL + LF+TH G E + PM+ +P DQF NA
Sbjct: 285 V-EVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL 341
Query: 2181 GLGIELSNKNLTVESL 2196
G+ +L+ + T + L
Sbjct: 342 GVARKLATEEATADLL 357
Score = 54.3 bits (129), Expect = 7e-07, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 1074 EGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYK-----YKVVWKWSGQDLGNVPRNVILK 1128
E + SLGS T P + RAF ++ K + +LG +P NV +
Sbjct: 232 EKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVH 288
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVT 1188
W PQ+ +L + LF+TH G E + P+I +P DQ+ NA + + G GV
Sbjct: 289 DWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQ--GLGVA 344
Query: 1189 LRNTNLSEASLD 1200
R EA+ D
Sbjct: 345 -RKLATEEATAD 355
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHI 419
LP NV + W+PQ +L + LF++H G + E + P+I VP DQ + +
Sbjct: 281 LPDNVEVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADML 338
Query: 420 VDLGAGVELSYFNITLESIAWATSIVLSNPRSA 452
LG +L+ T + + ++ +P A
Sbjct: 339 QGLGVARKLATEEATADLLRETALALVDDPEVA 371
Score = 38.9 bits (89), Expect = 0.031, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 1451 AATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSH----LTILWKWSGQPLSGLPRNX 1506
A +L SLGS T + P ++ F L L I K + L LP N
Sbjct: 229 AGAEKVVLVSLGSAFTKQ---PAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNV 285
Query: 1507 XXXXXXXXXXXLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGF 1566
L + LF+TH G E + P++ +P DQF NA G
Sbjct: 286 EVHDWVPQLAILRQAD--LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGV 343
Query: 1567 GVFLKITNLTSEALEWAITTVIGDP 1591
L T++ L ++ DP
Sbjct: 344 ARKLATEEATADLLRETALALVDDP 368
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 1632 LFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFGDLKKTLDAATN 1685
LF+TH G E + P+I +P DQ+ NA + + G T +A +
Sbjct: 302 LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATAD 355
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 1836 LFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA 1869
LF+TH G E + PM+ +P DQF NA
Sbjct: 302 LFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNA 335
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 1126 ILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFG 1184
++ W PQ VL HP+ F+TH G NS E++ G+P++ P+FADQ + + +
Sbjct: 356 LIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWE 415
Query: 1185 FGVTLRNTNLSEASLDWAISTVTTDS---RYKEQAMARSRILKDRLR 1228
G+ + +TN+ L I+ V + K++AM + ++ R
Sbjct: 416 IGMEI-DTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTR 461
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 366 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIV-DLGA 424
I W PQ VL HP+ F++H G NS E+I G+P++ PF+ DQ + R I +
Sbjct: 357 IASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEI 416
Query: 425 GVELSYFNITLESIA 439
G+E+ N+ E +A
Sbjct: 417 GMEIDT-NVKREELA 430
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ +L HP+ F+TH G S E++ GVPM+ P+F DQ + E+ +
Sbjct: 357 IASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEI 416
Query: 2183 GIELSNKNLTVESLGSLVSTI 2203
G+E+ + N+ E L L++ +
Sbjct: 417 GMEI-DTNVKREELAKLINEV 436
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 1518 LAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA-MKGVEFGFGVFLKITNLT 1576
L HP+ F+TH G +S E++ GVP++ PFFADQ ++ E+ G+ + TN+
Sbjct: 367 LNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVK 425
Query: 1577 SEALEWAITTVIGDPRGHHI 1596
E L I VI +G +
Sbjct: 426 REELAKLINEVIAGDKGKKM 445
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 1622 DNIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQ 1661
D ++ HP+ F+TH G NS E+I G+P++ P+FADQ
Sbjct: 364 DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 403
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 1817 LMVAYLLIRKILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EF 1875
L+ ++ K+L HP+ F+TH G S E++ GVPM+ P+F DQ + E+
Sbjct: 356 LIASWCPQDKVLN-HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEW 414
Query: 1876 GLGIELIPSSTKVNREIISEPHFNNLIRSGRG 1907
+G+E+ T V RE +++ N +I +G
Sbjct: 415 EIGMEI---DTNVKREELAK-LINEVIAGDKG 442
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 49/145 (33%), Positives = 65/145 (44%), Gaps = 25/145 (17%)
Query: 1087 PKTIDPVLLADL----------FRA----FSKYKYKVVWKWSG----QDLGNVPRNVILK 1128
P+ PVLL L FRA F+ + VV G LG +P NV
Sbjct: 227 PRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVXAIGGFLDPAVLGPLPPNVEAH 286
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAER---FGF 1185
W P VLAH + +THG + LEA G+P++ +P+FA + A AER G
Sbjct: 287 QWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATE--AAPSAERVIELGL 342
Query: 1186 GVTLRNTNLSEASLDWAISTVTTDS 1210
G LR L AS+ A+ + DS
Sbjct: 343 GSVLRPDQLEPASIREAVERLAADS 367
Score = 47.8 bits (112), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLS-HVRH 418
LP NV +WIP VLAH R ++HG + LEA G+P++ VP + + +
Sbjct: 279 LPPNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAER 336
Query: 419 IVDLGAG 425
+++LG G
Sbjct: 337 VIELGLG 343
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 2122 VQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQ-NAAKAVEF 2180
V+ QW+P +LAH + +THG + +EA GVP+V++P+F + +A + +E
Sbjct: 283 VEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL 340
Query: 2181 GLGIELSNKNLTVESLGSLVSTIQIQEA 2208
GLG L L S+ V + A
Sbjct: 341 GLGSVLRPDQLEPASIREAVERLAADSA 368
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 1499 LSGLPRNXXXXXXXXXXXXLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFS-N 1557
L LP N LAH + +THG + LE GVP+V +P FA + + +
Sbjct: 276 LGPLPPNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPS 333
Query: 1558 AMKGVEFGFGVFLKITNLTSEALEWAITTVIGD 1590
A + +E G G L+ L ++ A+ + D
Sbjct: 334 AERVIELGLGSVLRPDQLEPASIREAVERLAAD 366
Score = 36.2 bits (82), Expect = 0.19, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1838 ITHGGLKSQIEAVHFGVPMVIIPYFYDQFQ-NAAKAVEFGLGIELIP 1883
+THG + +EA GVP+V++P+F + +A + +E GLG L P
Sbjct: 302 LTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRP 348
Score = 35.4 bits (80), Expect = 0.40, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 35/125 (28%)
Query: 1582 WAITTVIG---DPRGHHITMYSPFPPKQNLTNFKHVHVQNQAFDNIMTHPNCKLFITHGG 1638
W + IG DP + P PP N+ + + F +++ H + +THG
Sbjct: 261 WHVVXAIGGFLDP-----AVLGPLPP--NVEAHQWI-----PFHSVLAH--ARACLTHGT 306
Query: 1639 LNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFGDLKKTLDAATNGFILFSLGSVITP 1698
+ LEA G+P++ +P+FA + A AER I LGSV+ P
Sbjct: 307 TGAVLEAFAAGVPLVLVPHFATE--AAPSAER----------------VIELGLGSVLRP 348
Query: 1699 KTIPP 1703
+ P
Sbjct: 349 DQLEP 353
>pdb|3IAA|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
pdb|3IAA|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp Bound Form
Length = 416
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 1077 IWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRNVILKPWAP 1132
+ SLG+ + P D RAF + VV GQ LG++P NV W P
Sbjct: 250 VLVSLGTTFNDR---PGFFRDCARAFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHRWVP 306
Query: 1133 QIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTL 1189
+ VL + +THGG + EA+++G P++ +P D A ++ G G L
Sbjct: 307 HVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 2116 ELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAA 2175
+LP +V + +WVP + +L + +THGG + EA+++G P+V++P +D A
Sbjct: 294 DLPPNV-EAHRWVPHVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXAR 350
Query: 2176 KAVEFGLGIELSNKNLTVESL 2196
+ + GLG L + ++L
Sbjct: 351 RVDQLGLGAVLPGEKADGDTL 371
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 315 VIYVSFGSLI--RPSRMSDSMRTLLVTAFSRTGLTVLWRYEGD----SIENLPGNVHIRK 368
V+ VS G+ RP D R AF V+ G ++ +LP NV +
Sbjct: 249 VVLVSLGTTFNDRPGFFRDCAR-----AFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHR 303
Query: 369 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 428
W+P VL + ++HGG + EA+++G P++ VP D R + LG G L
Sbjct: 304 WVPHVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 37.4 bits (85), Expect = 0.099, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
K+L+ C +THGG + EA+++G P+V++P +D A + + GLG L
Sbjct: 309 KVLEQATVC---VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 32.0 bits (71), Expect = 3.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 621 IWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRNVILKPWAP 676
+ SLG+ + P D RAF + VV GQ LG++P NV W P
Sbjct: 250 VLVSLGTTFNDR---PGFFRDCARAFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHRWVP 306
Query: 677 QIPVLGHFGPCL 688
+ VL C+
Sbjct: 307 HVKVLEQATVCV 318
Score = 31.6 bits (70), Expect = 4.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 1634 ITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
+THGG + EA+++G P++ +P D A ++ G G
Sbjct: 318 VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLG 358
>pdb|3RSC|A Chain A, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
pdb|3RSC|B Chain B, Crystal Structure Of Calg2, Calicheamicin
Glycosyltransferase, Tdp And Calicheamicin T0 Bound Form
Length = 415
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 1077 IWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRNVILKPWAP 1132
+ SLG+ + P D RAF + VV GQ LG++P NV W P
Sbjct: 250 VLVSLGTTFNDR---PGFFRDCARAFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHRWVP 306
Query: 1133 QIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTL 1189
+ VL + +THGG + EA+++G P++ +P D A ++ G G L
Sbjct: 307 HVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 2116 ELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAA 2175
+LP +V + +WVP + +L + +THGG + EA+++G P+V++P +D A
Sbjct: 294 DLPPNV-EAHRWVPHVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXAR 350
Query: 2176 KAVEFGLGIELSNKNLTVESL 2196
+ + GLG L + ++L
Sbjct: 351 RVDQLGLGAVLPGEKADGDTL 371
Score = 45.8 bits (107), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 13/120 (10%)
Query: 315 VIYVSFGSLI--RPSRMSDSMRTLLVTAFSRTGLTVLWRYEGD----SIENLPGNVHIRK 368
V+ VS G+ RP D R AF V+ G ++ +LP NV +
Sbjct: 249 VVLVSLGTTFNDRPGFFRDCAR-----AFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHR 303
Query: 369 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 428
W+P VL + ++HGG + EA+++G P++ VP D R + LG G L
Sbjct: 304 WVPHVKVLEQAT--VCVTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 37.4 bits (85), Expect = 0.10, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
K+L+ C +THGG + EA+++G P+V++P +D A + + GLG L
Sbjct: 309 KVLEQATVC---VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLGAVL 361
Score = 32.0 bits (71), Expect = 3.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 621 IWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRNVILKPWAP 676
+ SLG+ + P D RAF + VV GQ LG++P NV W P
Sbjct: 250 VLVSLGTTFNDR---PGFFRDCARAFDGQPWHVVXTLGGQVDPAALGDLPPNVEAHRWVP 306
Query: 677 QIPVLGHFGPCL 688
+ VL C+
Sbjct: 307 HVKVLEQATVCV 318
Score = 31.6 bits (70), Expect = 4.9, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 1634 ITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
+THGG + EA+++G P++ +P D A ++ G G
Sbjct: 318 VTHGGXGTLXEALYWGRPLVVVPQSFDVQPXARRVDQLGLG 358
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i Bound
Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i Bound
Form
Length = 412
Score = 47.8 bits (112), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 1118 LGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA 1177
LG VP NV L+ W PQ +L P+ L + HGG + L A+ G+P ++ P+ D + NA
Sbjct: 287 LGEVPANVRLESWVPQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANA 344
Query: 1178 LLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYK 1213
+ G G L N+S S+ A + + Y+
Sbjct: 345 QAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYR 380
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQL 413
+P NV + W+PQ +L H + L + HGG + L A+ G+P + P+ GD
Sbjct: 290 VPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVPQLSFPWAGDSF 341
Score = 39.3 bits (90), Expect = 0.022, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 2116 ELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQF 2171
E+P++V +++ WVPQ +L P+ L + HGG + + A+ GVP + P+ D F
Sbjct: 289 EVPANV-RLESWVPQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSF 341
>pdb|2YJN|A Chain A, Structure Of The Glycosyltransferase Eryciii From The
Erythromycin Biosynthetic Pathway, In Complex With Its
Activating Partner, Erycii
Length = 441
Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 1045 IEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSK 1104
++ VG +++ + +PE L D+ + +LG +I V + +L A
Sbjct: 241 LKTVGMRYVDYNGPSVVPEWLH---DEPERRRVCLTLGISSRENSIGQVSIEELLGAVGD 297
Query: 1105 YKYKVVWKWSGQDL---GNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFG 1161
+++ + Q L N+P NV + P +L P C + HGG S A G
Sbjct: 298 VDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTAAIHG 355
Query: 1162 IPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSR 1221
+P + +P D A + FG G+ L L+ L ++ V D ++ A +R
Sbjct: 356 VPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAHRAGA---AR 412
Query: 1222 ILKDRLRSP 1230
+ D L P
Sbjct: 413 MRDDMLAEP 421
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 34/71 (47%)
Query: 1521 PNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEAL 1580
P C + HGG S +GVP V +P D A + EFG G+ L + LT + L
Sbjct: 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQL 393
Query: 1581 EWAITTVIGDP 1591
++ V+ DP
Sbjct: 394 RESVKRVLDDP 404
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 2104 KIIWIWNGQQ---VTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVP 2160
+II ++ QQ V +P +V + +VP +L P C + HGG S A GVP
Sbjct: 301 EIIATFDAQQLEGVANIPDNVRTVG-FVPMHALL--PTCAATVHHGGPGSWHTAAIHGVP 357
Query: 2161 MVIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTI 2203
VI+P +D A + EFG GI L LT + L V +
Sbjct: 358 QVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRV 400
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 355 DSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLS 414
+ + N+P NV ++P +L P C + HGG S A +G+P + +P D
Sbjct: 312 EGVANIPDNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGV 369
Query: 415 HVRHIVDLGAGVELSYFNITLESIAWATSIVLSNP 449
+ + GAG+ L +T + + + VL +P
Sbjct: 370 RAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDP 404
Score = 40.8 bits (94), Expect = 0.008, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGI-----ELIPSST 1886
P C + HGG S A GVP VI+P +D A + EFG GI EL P
Sbjct: 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQL 393
Query: 1887 KVN-REIISEPHFNNLIRSGRGSF-DIVLAEP 1916
+ + + ++ +P R+G D +LAEP
Sbjct: 394 RESVKRVLDDPAH----RAGAARMRDDMLAEP 421
>pdb|3TSA|A Chain A, Spinosyn Rhamnosyltransferase Spng
pdb|3TSA|B Chain B, Spinosyn Rhamnosyltransferase Spng
Length = 391
Score = 44.3 bits (103), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 357 IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHV 416
+ +LP N I + +P L C L I GG +A A GIP + +P Y DQ +
Sbjct: 265 LTDLPDNARIAESVPLNLFLR--TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322
Query: 417 RHIVDLGAGVEL 428
R++ GAG+ L
Sbjct: 323 RNLAAAGAGICL 334
Score = 40.8 bits (94), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 2114 VTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQN 2173
+T+LP + +I + VP L C+L I GG + A G+P +++P ++DQF
Sbjct: 265 LTDLPDNA-RIAESVPLNLFLR--TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321
Query: 2174 AAKAVEFGLGIELSNK 2189
A G GI L ++
Sbjct: 322 ARNLAAAGAGICLPDE 337
Score = 39.3 bits (90), Expect = 0.028, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNRE 1891
C+L I GG + A G+P +++P ++DQF A G GI L + + E
Sbjct: 287 CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHE 344
Score = 35.4 bits (80), Expect = 0.39, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 1523 CKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEW 1582
C+L I GG + G+P + +P + DQF A G G+ L S+ ++
Sbjct: 287 CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQF 346
Query: 1583 --AITTVIGD 1590
+I TV+GD
Sbjct: 347 TDSIATVLGD 356
Score = 33.9 bits (76), Expect = 1.0, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 1120 NVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
+VP N+ L+ C+L I GG + A GIP + +P + DQ+ A
Sbjct: 277 SVPLNLFLR------------TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARN 324
Query: 1180 AERFGFGVTLRNTNLSEASLDW--AISTVTTDSRYKEQAMARS 1220
G G+ L + + +I+TV D+ + A+ S
Sbjct: 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLS 367
>pdb|3UYK|A Chain A, Spinosyn Rhamnosyltransferase Spng Complexed With Spinosyn
Aglycone
pdb|3UYK|B Chain B, Spinosyn Rhamnosyltransferase Spng Complexed With Spinosyn
Aglycone
pdb|3UYL|A Chain A, Spinosyn Rhamnosyltransferase Spng Complexed With
Thymidine Diphosphate
pdb|3UYL|B Chain B, Spinosyn Rhamnosyltransferase Spng Complexed With
Thymidine Diphosphate
Length = 387
Score = 44.3 bits (103), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 357 IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHV 416
+ +LP N I + +P L C L I GG +A A GIP + +P Y DQ +
Sbjct: 265 LTDLPDNARIAESVPLNLFLR--TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYA 322
Query: 417 RHIVDLGAGVEL 428
R++ GAG+ L
Sbjct: 323 RNLAAAGAGICL 334
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 2114 VTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQN 2173
+T+LP + +I + VP L C+L I GG + A G+P +++P ++DQF
Sbjct: 265 LTDLPDNA-RIAESVPLNLFLR--TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDY 321
Query: 2174 AAKAVEFGLGIELSNK 2189
A G GI L ++
Sbjct: 322 ARNLAAAGAGICLPDE 337
Score = 39.3 bits (90), Expect = 0.028, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNRE 1891
C+L I GG + A G+P +++P ++DQF A G GI L + + E
Sbjct: 287 CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHE 344
Score = 35.4 bits (80), Expect = 0.39, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 1523 CKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEW 1582
C+L I GG + G+P + +P + DQF A G G+ L S+ ++
Sbjct: 287 CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQF 346
Query: 1583 --AITTVIGD 1590
+I TV+GD
Sbjct: 347 TDSIATVLGD 356
Score = 33.9 bits (76), Expect = 1.1, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 14/103 (13%)
Query: 1120 NVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
+VP N+ L+ C+L I GG + A GIP + +P + DQ+ A
Sbjct: 277 SVPLNLFLR------------TCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARN 324
Query: 1180 AERFGFGVTLRNTNLSEASLDW--AISTVTTDSRYKEQAMARS 1220
G G+ L + + +I+TV D+ + A+ S
Sbjct: 325 LAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFAAAAIKLS 367
>pdb|4FZR|A Chain A, Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575
Glycosyltransferase
Length = 398
Score = 41.2 bits (95), Expect = 0.006, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 1094 LLADLFRAFSKYKYKVVWKWS---GQDLGNVPRNVILKPWAPQIPVLA-HPNCKLFITHG 1149
LL L + K ++VV S Q L +P V+ A Q P+ A P C + + HG
Sbjct: 252 LLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLA---AGQFPLSAIXPACDVVVHHG 308
Query: 1150 GLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTD 1209
G + L + G+P +++P A+ + +A L G GV + S+ A + + D
Sbjct: 309 GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDD 368
Query: 1210 SRY 1212
S Y
Sbjct: 369 SSY 371
Score = 38.5 bits (88), Expect = 0.041, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 379 PNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESI 438
P C + + HGG + L + G+P + VP + R + GAGVE+ + +ES+
Sbjct: 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESV 358
Query: 439 AWATS 443
A +
Sbjct: 359 LAACA 363
Score = 34.3 bits (77), Expect = 0.76, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 2111 GQQVTELPSHVVQIKQWVPQIPILA-HPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYD 2169
Q + LP V+ Q+ P+ A P C + + HGG + + + GVP V +P +
Sbjct: 276 AQTLQPLPEGVLAAGQF----PLSAIXPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAE 331
Query: 2170 QFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTIQ 2204
+ +A G G+E+ + VES+ + + I+
Sbjct: 332 VWDSARLLHAAGAGVEVPWEQAGVESVLAACARIR 366
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P C + + HGG + L + G+P +++P A+ + +A L G G
Sbjct: 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAG 345
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 1521 PNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA 1558
P C + + HGG + L ++ GVP V++P A+ + +A
Sbjct: 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336
>pdb|4G2T|A Chain A, Crystal Structure Of Streptomyces Sp. Sf2575
Glycosyltransferase Ssfs6, Complexed With Thymidine
Diphosphate
Length = 397
Score = 41.2 bits (95), Expect = 0.007, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 1094 LLADLFRAFSKYKYKVVWKWS---GQDLGNVPRNVILKPWAPQIPVLA-HPNCKLFITHG 1149
LL L + K ++VV S Q L +P V+ A Q P+ A P C + + HG
Sbjct: 251 LLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLA---AGQFPLSAIXPACDVVVHHG 307
Query: 1150 GLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTD 1209
G + L + G+P +++P A+ + +A L G GV + S+ A + + D
Sbjct: 308 GHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDD 367
Query: 1210 SRY 1212
S Y
Sbjct: 368 SSY 370
Score = 38.5 bits (88), Expect = 0.044, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 379 PNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESI 438
P C + + HGG + L + G+P + VP + R + GAGVE+ + +ES+
Sbjct: 298 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESV 357
Query: 439 AWATS 443
A +
Sbjct: 358 LAACA 362
Score = 34.3 bits (77), Expect = 0.83, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 2111 GQQVTELPSHVVQIKQWVPQIPILA-HPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYD 2169
Q + LP V+ Q+ P+ A P C + + HGG + + + GVP V +P +
Sbjct: 275 AQTLQPLPEGVLAAGQF----PLSAIXPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAE 330
Query: 2170 QFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTIQ 2204
+ +A G G+E+ + VES+ + + I+
Sbjct: 331 VWDSARLLHAAGAGVEVPWEQAGVESVLAACARIR 365
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P C + + HGG + L + G+P +++P A+ + +A L G G
Sbjct: 298 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAG 344
Score = 33.5 bits (75), Expect = 1.5, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 1521 PNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA 1558
P C + + HGG + L ++ GVP V++P A+ + +A
Sbjct: 298 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSA 335
>pdb|3D0R|A Chain A, Crystal Structure Of Calg3 From Micromonospora Echinospora
Determined In Space Group P2(1)
pdb|3D0R|B Chain B, Crystal Structure Of Calg3 From Micromonospora Echinospora
Determined In Space Group P2(1)
pdb|3OTI|A Chain A, Crystal Structure Of Calg3, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin T0 Bound Form
pdb|3OTI|B Chain B, Crystal Structure Of Calg3, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin T0 Bound Form
Length = 398
Score = 40.4 bits (93), Expect = 0.012, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREII 1893
C + HGG + + A+ G+P ++ P DQFQ+ A+ GI L+ +S KV+ +++
Sbjct: 300 CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLL 359
Score = 37.4 bits (85), Expect = 0.089, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 1118 LGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRN 1176
LG +PRNV W P +L C + HGG + + A+ GIP + P DQ+++
Sbjct: 278 LGTLPRNVRAVGWTPLHTLLR--TCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334
Score = 36.6 bits (83), Expect = 0.17, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSH 415
LP NV W P +L C + HGG + + AI GIP + P DQ H
Sbjct: 281 LPRNVRAVGWTPLHTLLR--TCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334
Score = 35.0 bits (79), Expect = 0.47, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 2117 LPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAK 2176
LP +V + W P +L C + HGG + + A+ G+P ++ P DQFQ+ A+
Sbjct: 281 LPRNVRAVG-WTPLHTLLR--TCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAR 337
Query: 2177 AV--EFGLGIELSNKNLTVESLGSLVSTIQIQEAS 2209
G+G+ ++ + + L L+ ++ A+
Sbjct: 338 EAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAA 372
>pdb|3D0Q|A Chain A, Crystal Structure Of Calg3 From Micromonospora Echinospora
Determined In Space Group I222
pdb|3D0Q|B Chain B, Crystal Structure Of Calg3 From Micromonospora Echinospora
Determined In Space Group I222
Length = 398
Score = 39.3 bits (90), Expect = 0.022, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREII 1893
C + HGG + A+ G+P ++ P DQFQ+ A+ GI L+ +S KV+ +++
Sbjct: 300 CTAVVHHGGGGTVXTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLL 359
Score = 36.2 bits (82), Expect = 0.22, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 1118 LGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRN 1176
LG +PRNV W P +L C + HGG + A+ GIP + P DQ+++
Sbjct: 278 LGTLPRNVRAVGWTPLHTLLR--TCTAVVHHGGGGTVXTAIDAGIPQLLAPDPRDQFQH 334
Score = 35.0 bits (79), Expect = 0.41, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 360 LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSH 415
LP NV W P +L C + HGG + AI GIP + P DQ H
Sbjct: 281 LPRNVRAVGWTPLHTLLR--TCTAVVHHGGGGTVXTAIDAGIPQLLAPDPRDQFQH 334
Score = 34.3 bits (77), Expect = 0.87, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 2117 LPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAK 2176
LP +V + W P +L C + HGG + A+ G+P ++ P DQFQ+ A+
Sbjct: 281 LPRNVRAVG-WTPLHTLLR--TCTAVVHHGGGGTVXTAIDAGIPQLLAPDPRDQFQHTAR 337
Query: 2177 AV--EFGLGIELSNKNLTVESLGSLVSTIQIQEAS 2209
G+G+ ++ + + L L+ ++ A+
Sbjct: 338 EAVSRRGIGLVSTSDKVDADLLRRLIGDESLRTAA 372
>pdb|4AMB|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMB|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 39.3 bits (90), Expect = 0.023, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2122 VQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFG 2181
V++ +W+P +L C I HGG + + A+ GVP +IP+ Q N G
Sbjct: 290 VRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347
Query: 2182 LGIELSNKNLTVESLGSLVSTIQIQEAS 2209
+G + +L E L+ ++EA+
Sbjct: 348 IGFDAEAGSLGAEQCRRLLDDAGLREAA 375
Score = 36.6 bits (83), Expect = 0.15, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 361 PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIV 420
P NV + +WIP +L C I HGG + L A+ G+P +P Q ++ +
Sbjct: 287 PANVRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344
Query: 421 DLGAGVE 427
LG G +
Sbjct: 345 GLGIGFD 351
Score = 35.0 bits (79), Expect = 0.53, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 1122 PRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPY--FADQYRNALL 1179
P NV + W P +L C I HGG + L A+ G+P IP+ + D R+ L
Sbjct: 287 PANVRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344
Query: 1180 AERFGF 1185
GF
Sbjct: 345 GLGIGF 350
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGI 1879
C I HGG + + A+ GVP +IP + +Q+ + V GLGI
Sbjct: 305 CDAIIHHGGSGTLLTALAAGVPQCVIP--HGSYQDTNRDVLTGLGI 348
>pdb|4AMG|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AMG|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|A Chain A, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|B Chain B, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|C Chain C, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
pdb|4AN4|D Chain D, Crystal Structure Of The Glycosyltransferase Snogd From
Streptomyces Nogalater
Length = 400
Score = 39.3 bits (90), Expect = 0.023, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2122 VQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFG 2181
V++ +W+P +L C I HGG + + A+ GVP +IP+ Q N G
Sbjct: 290 VRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347
Query: 2182 LGIELSNKNLTVESLGSLVSTIQIQEAS 2209
+G + +L E L+ ++EA+
Sbjct: 348 IGFDAEAGSLGAEQCRRLLDDAGLREAA 375
Score = 36.6 bits (83), Expect = 0.16, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 361 PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIV 420
P NV + +WIP +L C I HGG + L A+ G+P +P Q ++ +
Sbjct: 287 PANVRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344
Query: 421 DLGAGVE 427
LG G +
Sbjct: 345 GLGIGFD 351
Score = 34.7 bits (78), Expect = 0.54, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Query: 1122 PRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPY--FADQYRNALL 1179
P NV + W P +L C I HGG + L A+ G+P IP+ + D R+ L
Sbjct: 287 PANVRVVEWIPLGALLE--TCDAIIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLT 344
Query: 1180 AERFGF 1185
GF
Sbjct: 345 GLGIGF 350
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGI 1879
C I HGG + + A+ GVP +IP + +Q+ + V GLGI
Sbjct: 305 CDAIIHHGGSGTLLTALAAGVPQCVIP--HGSYQDTNRDVLTGLGI 348
>pdb|3H4I|A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel
Natural Products
pdb|3H4T|A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel
Natural Products - Gtfah1 In Complex With Udp-2f-Glc
Length = 404
Score = 38.1 bits (87), Expect = 0.054, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 2143 ITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVST 2202
+ HGG + G P V++P DQ A + + G+G+ TVESL + ++T
Sbjct: 289 VHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALAT 348
Score = 34.7 bits (78), Expect = 0.58, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 385 ISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSI 444
+ HGG + G P + VP DQ + + DLG GV T+ES++ A +
Sbjct: 289 VHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALAT 348
Query: 445 VLS 447
L+
Sbjct: 349 ALT 351
>pdb|1RRV|A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd
As A Complex With Tdp And The Natural Substrate,
Desvancosaminyl Vancomycin.
pdb|1RRV|B Chain B, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd
As A Complex With Tdp And The Natural Substrate,
Desvancosaminyl Vancomycin
Length = 416
Score = 36.2 bits (82), Expect = 0.19, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 2143 ITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVST 2202
I HG ++ A GVP ++IP DQ A + G+G+ T ESL + ++T
Sbjct: 307 IHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTT 366
Query: 2203 IQIQE 2207
+ E
Sbjct: 367 VLAPE 371
>pdb|2P6P|A Chain A, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
pdb|2P6P|B Chain B, X-Ray Crystal Structure Of C-C Bond-Forming
Dtdp-D-Olivose-Transferase Urdgt2
Length = 384
Score = 35.4 bits (80), Expect = 0.34, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 369 WIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVEL 428
W P DV+A P C L + H G S L + G+P + +P + R + D GA + L
Sbjct: 270 WTPL-DVVA-PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL 327
Query: 429 SYFNITLESIA 439
+ E+IA
Sbjct: 328 LPGEDSTEAIA 338
Score = 33.9 bits (76), Expect = 0.93, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 2109 WNGQQVTELPSHVVQ-IKQWVPQIPI------LAHPNCKLFITHGGLKSQIEAVHFGVPM 2161
W+ + + P V + ++ VPQ + + P C L + H G S + + GVP
Sbjct: 243 WDVELIVAAPDTVAEALRAEVPQARVGWTPLDVVAPTCDLLVHHAGGVSTLTGLSAGVPQ 302
Query: 2162 VIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTIQIQE 2207
++IP A + ++G I L + E++ +Q ++
Sbjct: 303 LLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKD 348
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIP 1883
P C L + H G S + + GVP ++IP A + ++G I L+P
Sbjct: 278 PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLP 329
>pdb|1IIR|A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb
Length = 415
Score = 35.0 bits (79), Expect = 0.44, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 2143 ITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVST 2202
I HGG + A G P +++P DQ A + E G+G+ T +SL + ++T
Sbjct: 306 IHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALAT 365
Score = 32.0 bits (71), Expect = 3.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 1838 ITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGI 1879
I HGG + A G P +++P DQ A + E G+G+
Sbjct: 306 IHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGV 347
>pdb|1RD5|A Chain A, Crystal Structure Of Tryptophan Synthase Alpha Chain Homolog
Bx1: A Member Of The Chemical Plant Defense System
pdb|1RD5|B Chain B, Crystal Structure Of Tryptophan Synthase Alpha Chain Homolog
Bx1: A Member Of The Chemical Plant Defense System
Length = 262
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 2050 RNGNLSL--------PEDIQKTLDSASQGFI-LYSLGSIMKSETAPDTLARTLVETFSKF 2100
+N NL L PED K + AS+GF+ L S+ + + +L++ K
Sbjct: 140 KNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV 199
Query: 2101 ENYKIIWIWNGQQVTELPSHVVQIKQW 2127
N K + + G P HV QI QW
Sbjct: 200 TN-KPVAVGFG---ISKPEHVKQIAQW 222
>pdb|1TJR|A Chain A, Crystal Structure Of Wild-Type Bx1 Complexed With A Sulfate
Ion
pdb|1TJR|B Chain B, Crystal Structure Of Wild-Type Bx1 Complexed With A Sulfate
Ion
Length = 261
Score = 32.7 bits (73), Expect = 2.1, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 2050 RNGNLSL--------PEDIQKTLDSASQGFI-LYSLGSIMKSETAPDTLARTLVETFSKF 2100
+N NL L PED K + AS+GF+ L S+ + + +L++ K
Sbjct: 139 KNNNLELVLLTTPAIPEDRXKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKV 198
Query: 2101 ENYKIIWIWNGQQVTELPSHVVQIKQW 2127
N K + + G P HV QI QW
Sbjct: 199 TN-KPVAVGFG---ISKPEHVKQIAQW 221
>pdb|2JTV|A Chain A, Solution Structure Of Protein Rpa3401, Northeast
Structural Genomics Consortium Target Rpt7, Ontario
Center For Structural Proteomics Target Rp3384
Length = 65
Score = 32.7 bits (73), Expect = 2.2, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 860 RNPAFNNREYSPFEDCRQIGWFHLSAYDS 888
R F +RE PFED +GW S+ DS
Sbjct: 19 RRQVFGSREQKPFEDLVDLGWLKRSSVDS 47
>pdb|2WQD|A Chain A, Crystal Structure Of Enzyme I Of The
Phosphoenolpyruvate:sugar Phosphotransferase System In
The Dephosphorylated State
Length = 572
Score = 30.8 bits (68), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2031 EYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILY 2074
E + + + V + G+H E N+ P D+ +++ +QG LY
Sbjct: 254 ELQKLRDADTVTVDGVHAELAANIGTPNDLPGVIENGAQGIGLY 297
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,559,534
Number of Sequences: 62578
Number of extensions: 2788760
Number of successful extensions: 5820
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5580
Number of HSP's gapped (non-prelim): 203
length of query: 2211
length of database: 14,973,337
effective HSP length: 114
effective length of query: 2097
effective length of database: 7,839,445
effective search space: 16439316165
effective search space used: 16439316165
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)