RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy10180
(2211 letters)
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD,
enzyme, nucleotide binding,
sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo
sapiens}
Length = 170
Score = 205 bits (523), Expect = 7e-61
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 1061 LPEDLKQILDDAHE-GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLG 1119
LP++++ + + E G + FSLGS++ + + A ++ KV+W++ G
Sbjct: 7 LPKEMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQKVLWRFDGNKPD 64
Query: 1120 NVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL 1179
+ N L W PQ +L HP + FITHGG N EA++ GIP++ IP FADQ N
Sbjct: 65 TLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAH 124
Query: 1180 AERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKD 1225
+ G V + +S L A+ V D YKE M SRI D
Sbjct: 125 MKARGAAVRVDFNTMSSTDLLNALKRVINDPSYKENVMKLSRIQHD 170
Score = 199 bits (508), Expect = 7e-59
Identities = 54/154 (35%), Positives = 93/154 (60%), Gaps = 3/154 (1%)
Query: 298 KKLPKDLQDLMDSA-TRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEGDS 356
K LPK+++D + S+ GV+ S GS++ S M++ ++ +A ++ VLWR++G+
Sbjct: 5 KPLPKEMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQKVLWRFDGNK 62
Query: 357 IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHV 416
+ L N + KWIPQ D+L HP R FI+HGG N EAI++GIP++G+P + DQ ++
Sbjct: 63 PDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNI 122
Query: 417 RHIVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
H+ GA V + + ++ + A V+++P
Sbjct: 123 AHMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156
Score = 189 bits (483), Expect = 2e-55
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 1441 LSEDLKKTLD-AATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPL 1499
L ++++ + + NG ++FSLGS++ + E N + ++ +LW++ G
Sbjct: 7 LPKEMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQ-KVLWRFDGNKP 63
Query: 1500 SGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAM 1559
L N KW+PQ +L HP + FITHGG + E + +G+P+V IP FADQ N
Sbjct: 64 DTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIA 123
Query: 1560 KGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
G V + ++S L A+ VI DP
Sbjct: 124 HMKARGAAVRVDFNTMSSTDLLNALKRVINDPS 156
Score = 163 bits (416), Expect = 3e-46
Identities = 40/149 (26%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 2056 LPEDIQKTLDSASQ-GFILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQQV 2114
LP++++ + S+ + G +++SLGS++ + + A + ++ K++W ++G +
Sbjct: 7 LPKEMEDFVQSSGENGVVVFSLGSMVSN--MTEERANVIASALAQIP-QKVLWRFDGNKP 63
Query: 2115 TELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA 2174
L + ++ +W+PQ +L HP + FITHGG EA++ G+PMV IP F DQ N
Sbjct: 64 DTLGLNT-RLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNI 122
Query: 2175 AKAVEFGLGIELSNKNLTVESLGSLVSTI 2203
A G + + ++ L + + +
Sbjct: 123 AHMKARGAAVRVDFNTMSSTDLLNALKRV 151
Score = 93.0 bits (232), Expect = 1e-21
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 1830 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
HP + FITHGG EA++ G+PMV IP F DQ N A G + +
Sbjct: 83 GHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV 134
Score = 86.9 bits (216), Expect = 2e-19
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 606 PWDLKQILDDAHE-GFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGN 664
P +++ + + E G + FSLGS++ + + A ++ KV+W++ G
Sbjct: 8 PKEMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQKVLWRFDGNKPDT 65
Query: 665 VPRNVILKPWAPQIPVLGH 683
+ N L W PQ +LGH
Sbjct: 66 LGLNTRLYKWIPQNDLLGH 84
Score = 86.1 bits (214), Expect = 3e-19
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 1624 IMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
++ HP + FITHGG N EAI+ GIP++ IP FADQ N + G
Sbjct: 81 LLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAA 131
Score = 81.1 bits (201), Expect = 2e-17
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 1675 DLKKTLD-AATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGL 1733
+++ + + NG ++FSLGS++ + E N + ++ +LW++ G L
Sbjct: 10 EMEDFVQSSGENGVVVFSLGSMV--SNMTEERANVIASALAQIPQ-KVLWRFDGNKPDTL 66
Query: 1734 PRNVVQQKWVPQVPVLG 1750
N KW+PQ +LG
Sbjct: 67 GLNTRLYKWIPQNDLLG 83
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance,
glycosylation, enzyme, macrolide, carbohydrate; HET: ERY
UDP; 1.7A {Streptomyces antibioticus}
Length = 430
Score = 182 bits (464), Expect = 1e-49
Identities = 87/462 (18%), Positives = 133/462 (28%), Gaps = 65/462 (14%)
Query: 804 QTQGSRILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP--FPPKQNLTNFKHVYVRN 861
QT + I + H + L ARGH +T P F K T + V +
Sbjct: 4 QTTPAHIA-MFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGPRPVLYHS 62
Query: 862 PAFNNREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRSKDAFDLAMVE 921
P D W + D++E L + L + DL + +
Sbjct: 63 TL-------PGPDADPEAW-GSTLLDNVEPFLNDAIQALPQ-LADAYADDI--PDLVLHD 111
Query: 922 STFHQQTTVLLGHYFKCPVILMGSVSVDSNILESMGSPNVLSIMPEQLRPLSDRMTLTER 981
T + +L + P + + E P+ TER
Sbjct: 112 ITSY--PARVLARRWGVPAVSLSP-----------NLVAWKGYEEEVAEPMWREPRQTER 158
Query: 982 IQNVYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVSFAFL-YSNAALNYPFP 1040
+ YYA GI F + L AL
Sbjct: 159 GRA-YYARFEAWLKE---------------NGITEHPDTFASHPPRSLVLIPKALQPHAD 202
Query: 1041 NTP--NIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADL 1098
VG +R E+ E + SLGS T P +
Sbjct: 203 RVDEDVYTFVGACQGDR------AEEGGWQRPAGAEKVVLVSLGSAF---TKQPAFYREC 253
Query: 1099 FRAFSKYKYKVVWKWSGQ-----DLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNS 1153
RAF + G+ +LG +P NV + W PQ+ +L LF+TH G
Sbjct: 254 VRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQ--ADLFVTHAGAGG 311
Query: 1154 QLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYK 1213
E + P+I +P DQ+ NA + + G L + L + D
Sbjct: 312 SQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVA 371
Query: 1214 EQAMARSRILKDRLRSPLDTAVYWTEYVLQHEGALHLSPVSR 1255
+ + + + E +HE PV
Sbjct: 372 RRLRRIQAEMAQEGGTRRAADLIEAELPARHERQ---EPVGD 410
Score = 144 bits (366), Expect = 8e-37
Identities = 49/300 (16%), Positives = 89/300 (29%), Gaps = 42/300 (14%)
Query: 156 AVIGEIWFAQEALAVFGHKFQAPIIGLISYGTPHTVSTYMGTPNLYSYMPDYKFAFPARM 215
V+ +I V ++ P + L Y +
Sbjct: 107 LVLHDITSY--PARVLARRWGVPAVSLSP-----------NLVAWKGYEEEVAEPMWREP 153
Query: 216 NFLQRLQNTILGVYTQLVGDWWYYPKLDGIMRDFANHSAELPHLTTLLRNVSTTFVYSDV 275
+R + YY + + +++ E P S + +
Sbjct: 154 RQTERGRA--------------YYARFEAWLKENG--ITEHPDTFASHPPRSLVLIPKAL 197
Query: 276 MLEYPRPQTSNLIHVGGIHLRNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMRT 335
R VG + + + V+ VS GS ++ R
Sbjct: 198 QPHADRVDEDVYTFVGACQGDRAEEGGWQRP---AGAEKVVLVSLGSAF--TKQPAFYRE 252
Query: 336 LLVTAFSRTGLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV 390
+ AF L G + LP NV + W+PQ +L LF++H G
Sbjct: 253 CV-RAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQ--ADLFVTHAGA 309
Query: 391 NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
+ E + P+I VP DQ + + LG +L+ T + + ++ +P
Sbjct: 310 GGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPE 369
Score = 141 bits (357), Expect = 1e-35
Identities = 60/372 (16%), Positives = 110/372 (29%), Gaps = 52/372 (13%)
Query: 1837 FITHGGLKSQIEAVHFG-VPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISE 1895
+ ++ A V D A + + + + ++
Sbjct: 40 YAIPPVFADKVAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLAD- 98
Query: 1896 PHFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNI 1955
D+VL + L GVP ++L +
Sbjct: 99 -----AYADDI--PDLVLHDITSY--PARVLARRWGVPAVSLSPNLVAWK---------- 139
Query: 1956 VSHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVESL 2015
+ E + ER + + + G P +
Sbjct: 140 -GYEEEVAEPMWREPRQTERGRAYYARFEAW--------------LKENGITEHPDTFAS 184
Query: 2016 LRNISLSFVCTDVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILYS 2075
SL + + R +G +R E+ + ++ +L S
Sbjct: 185 HPPRSLVLIPKALQPHADRVDEDVYTFVGACQGDR------AEEGGWQRPAGAEKVVLVS 238
Query: 2076 LGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQ----QVTELPSHVVQIKQWVPQI 2131
LGS + A R V F + ++ + ++ ELP +V ++ WVPQ+
Sbjct: 239 LGSAFTKQPA---FYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNV-EVHDWVPQL 294
Query: 2132 PILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNL 2191
IL LF+TH G E + PM+ +P DQF NA G+ +L+ +
Sbjct: 295 AILRQ--ADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352
Query: 2192 TVESLGSLVSTI 2203
T + L +
Sbjct: 353 TADLLRETALAL 364
Score = 134 bits (338), Expect = 4e-33
Identities = 51/286 (17%), Positives = 88/286 (30%), Gaps = 39/286 (13%)
Query: 1311 VLGHIFNAPVIHLAATGPYGNILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMI 1370
VL + P + L+ + E+ + ER + ++
Sbjct: 119 VLARRWGVPAVSLSPNLVAWK-----------GYEEEVAEPMWREPRQTERGRAYYAR-- 165
Query: 1371 RYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAG 1430
+ +++N P + S+ + +
Sbjct: 166 -----------FEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADRVDEDVYTFVGA 214
Query: 1431 IHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTI 1490
R +E+ A +L SLGS T P ++ F L +
Sbjct: 215 CQGDR------AEEGGWQRPAGAEKVVLVSLGSAFTK---QPAFYRECVRAFGNLPGWHL 265
Query: 1491 LWKWSGQP----LSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVV 1546
+ + + L LP NV WVPQ+ +L LF+TH G E + P++
Sbjct: 266 VLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQ--ADLFVTHAGAGGSQEGLATATPMI 323
Query: 1547 TIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
+P DQF NA G L T++ L ++ DP
Sbjct: 324 AVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPE 369
Score = 75.2 bits (185), Expect = 7e-14
Identities = 17/73 (23%), Positives = 27/73 (36%), Gaps = 6/73 (8%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN-- 1889
LF+TH G E + PM+ +P DQF NA G+ +L +
Sbjct: 298 RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLL 357
Query: 1890 ----REIISEPHF 1898
++ +P
Sbjct: 358 RETALALVDDPEV 370
Score = 69.8 bits (171), Expect = 3e-12
Identities = 21/170 (12%), Positives = 37/170 (21%), Gaps = 57/170 (33%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFGDLKKTLDAATNGF 1687
LF+TH G E + P+I +P DQ+ NA + + G + L
Sbjct: 298 RQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVA---RKLATEE--- 351
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVP 1747
T + R
Sbjct: 352 --------ATADLL---------------------------------RETALA------- 363
Query: 1748 VLGGTLYKEQAMARSRILKDRLRSPLDTAVYWTEYVLQHGGALHLSPVSR 1797
++ + + + + E +H PV
Sbjct: 364 LVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAELPARHERQ---EPVGD 410
Score = 54.4 bits (131), Expect = 3e-07
Identities = 21/84 (25%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 605 RPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ---- 660
R + E + SLGS T P + RAF + G+
Sbjct: 219 RAEEGGWQRPAGAEKVVLVSLGSAF---TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP 275
Query: 661 -DLGNVPRNVILKPWAPQIPVLGH 683
+LG +P NV + W PQ+ +L
Sbjct: 276 AELGELPDNVEVHDWVPQLAILRQ 299
Score = 45.2 bits (107), Expect = 2e-04
Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Query: 1680 LDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQP----LSGLPR 1735
A +L SLGS T P ++ F L ++ + + L LP
Sbjct: 227 RPAGAEKVVLVSLGSAFTK---QPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPD 283
Query: 1736 NVVQQKWVPQVPVLG 1750
NV WVPQ+ +L
Sbjct: 284 NVEVHDWVPQLAILR 298
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein
structure initiative, STRU genomics of pathogenic
protozoa consortium; 2.09A {Plasmodium falciparum}
Length = 244
Score = 174 bits (444), Expect = 4e-49
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 26 AERIKAEKLK-IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKG 84
+K+ KLK +VC+PTS K + L LE H ++ IDG DE+D NL LIKG
Sbjct: 47 DNLLKSGKLKDVVCIPTSIDTELKARKLGIPLTTLEKHSNIDITIDGTDEIDLNLNLIKG 106
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKN-LGDRYKKGIPIEVIPLAYVPVQKKIQTIF 143
GG L +EK+VAS + L+II D +K N LG +PIE++ Y + + + I+
Sbjct: 107 RGGALVREKLVASSSSLLIIIGDESKLCTNGLG--MTGAVPIEILTFGYEKIIENLLKIY 164
Query: 144 ---GGQAPVRMAKSKAVI 158
G +R + I
Sbjct: 165 TLKGCTYKIRKRNGEIFI 182
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Length = 225
Score = 171 bits (437), Expect = 2e-48
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGG 85
R++ E L+++ V TS + + L ++ + +DGADEVD N IKGG
Sbjct: 38 GRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDSVDVTVDGADEVDPNFNGIKGG 97
Query: 86 GGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGG 145
GG L EKIV + T + + D +K LG +P+EV+ + ++ + G
Sbjct: 98 GGALLMEKIVGTLTKDYIWVVDESKMVDTLG---AFRLPVEVVQYGAERLFREFEKK-GY 153
Query: 146 QAPVRMAKSKAVI 158
+ R +
Sbjct: 154 KPSFREYDGVRFV 166
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces
cerevisiae}
Length = 264
Score = 170 bits (433), Expect = 2e-47
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 26 AERIKAEK-----LKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLV 80
+ + K K +C+PT FQ+R LIL N + LG +E +P + DGADEVDENL
Sbjct: 58 GQYLHDPKFYEVASKFICIPTGFQSRNLILDNKLQLGSIEQYPRIDIAFDGADEVDENLQ 117
Query: 81 LIKGGGGCLTQEKIVASCTPKLVIIADHTKQS-KNLGDRYKKGIPIEVIPLAYVPVQKKI 139
LIKGGG CL QEK+V++ +++AD K+S K+LG +++G+PIE++P +YV V+ +
Sbjct: 118 LIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKHLGKNWRQGVPIEIVPSSYVRVKNDL 177
Query: 140 QTIFGGQAPV-RMAKSK 155
+ R S
Sbjct: 178 LEQLHAEKVDIRQGGSA 194
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A
{Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB:
1lk7_A*
Length = 229
Score = 166 bits (423), Expect = 2e-46
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 4/132 (3%)
Query: 26 AERIKAEK-LKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKG 84
E++K + IV VPTS+QA+ L +++++ + L+ + +DGADEVD NL LIKG
Sbjct: 40 GEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKG 99
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFG 144
G LT EKI+ +++ D K L + +PIEVIP A+ + +++ F
Sbjct: 100 RGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKM--PVPIEVIPQAWKAIIEELSI-FN 156
Query: 145 GQAPVRMAKSKA 156
+A +RM +K
Sbjct: 157 AKAELRMGVNKD 168
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics,
pentose phosphate pathway, carbon fixation, NPPSFA;
1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Length = 226
Score = 164 bits (417), Expect = 9e-46
Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 5/132 (3%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDE-NLVLIKG 84
RI+ E+L + +PTSF+A+ L ++ + L L+ + D+ DGADEV+E L LIKG
Sbjct: 40 GNRIREEELTVFGIPTSFEAKMLAMQYEIPLVTLDEY-DVDIAFDGADEVEETTLFLIKG 98
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFG 144
GGGC TQEKIV + V++ D +K K LG+++ IP+EVIP AY V + + G
Sbjct: 99 GGGCHTQEKIVDYNANEFVVLVDESKLVKKLGEKFP--IPVEVIPSAYRVVIRALSE-MG 155
Query: 145 GQAPVRMAKSKA 156
G+A +R+ K
Sbjct: 156 GEAVIRLGDRKR 167
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken
structural genomics/proteomi initiative, RSGI,
structural genomics; HET: A5P; 1.74A {Thermus
thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A*
1uj4_A*
Length = 227
Score = 163 bits (414), Expect = 3e-45
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 26 AERIKAEKLK-IVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKG 84
A R++ +LK +V VPTS +L + + L DL + IDGADE+ L LIKG
Sbjct: 42 ARRLREGELKGVVGVPTSRATEELAKREGIPLVDLPPEG-VDLAIDGADEIAPGLALIKG 100
Query: 85 GGGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFG 144
GG L +EKIV + ++IADHTK+ LG + +P+E++P Y K I + G
Sbjct: 101 MGGALLREKIVERVAKEFIVIADHTKKVPVLG---RGPVPVEIVPFGYRATLKAIADL-G 156
Query: 145 GQAPVRMAKSKAVI 158
G+ +RM +
Sbjct: 157 GEPELRMDGDEFYF 170
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW,
STRU genomics, seattle structural genomics center for
infectious; HET: 5RP; 2.30A {Bartonella henselae}
Length = 255
Score = 161 bits (411), Expect = 1e-44
Identities = 51/138 (36%), Positives = 68/138 (49%), Gaps = 9/138 (6%)
Query: 26 AERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGG 85
ER+ L++ CV TS + QL K + + LE P+L IDGADE+ + LIKGG
Sbjct: 61 GERVA-NGLRVTCVATSQYSEQLCHKFGVPISTLEKIPELDLDIDGADEIGPEMTLIKGG 119
Query: 86 GGCLTQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIF-- 143
GG L EKIVAS + + +IAD TK K LG +PIEV P + I+
Sbjct: 120 GGALLHEKIVASASRAMFVIADETKMVKTLG---AFALPIEVNPFGIHATRIAIEKAADN 176
Query: 144 ---GGQAPVRMAKSKAVI 158
G+ +RM
Sbjct: 177 LGLSGEITLRMNGDDPFK 194
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation,
enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces
antibioticus}
Length = 424
Score = 165 bits (419), Expect = 8e-44
Identities = 83/447 (18%), Positives = 131/447 (29%), Gaps = 45/447 (10%)
Query: 809 RILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP--FPPKQNLTNFKHVYVRN--PAF 864
I F + H + + L ARGH ++ F + V + P
Sbjct: 14 HIS-FFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDSILPKE 72
Query: 865 NNREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRSKDAFDLAMVESTF 924
+N E S ED L + L + AD D DL + +
Sbjct: 73 SNPEESWPEDQESAMGLFLDEAVRVLPQL---EDAYAD----------DRPDLIVYDIAS 119
Query: 925 HQQTTVLLGHYFKCPVILMGSVSVDSNILESMGSPNVLSIMPEQLRPLSDRMTLTERIQN 984
+LG + P + + V E + T
Sbjct: 120 W--PAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGA 177
Query: 985 VYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVSFAFLYSNAALNYPFPNTP- 1043
+ F R+ + G P E L
Sbjct: 178 EAEDGLVRFFTRL------SAFLEEHGVDTPATEFLIAPNRCIVALP-RTFQIKGDTVGD 230
Query: 1044 NIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFS 1103
N VG + +R + + +LGS T A
Sbjct: 231 NYTFVGPTYGDR---SHQGTWE---GPGDGRPVLLIALGSAF---TDHLDFYRTCLSAVD 281
Query: 1104 KYKYKVVWKWSGQ----DLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVH 1159
+ VV DLG VP NV + W PQ+ +L FITH G+ S +EA+
Sbjct: 282 GLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTK--ASAFITHAGMGSTMEALS 339
Query: 1160 FGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMAR 1219
+P++ +P A+Q NA G G + ++ L A+ V +D E+ A
Sbjct: 340 NAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAV 399
Query: 1220 SRILKDRLRSPLDTAVYWTEYVLQHEG 1246
+ +++ A E +L G
Sbjct: 400 RQEIRE--AGGARAAADILEGILAEAG 424
Score = 143 bits (362), Expect = 3e-36
Identities = 58/300 (19%), Positives = 99/300 (33%), Gaps = 25/300 (8%)
Query: 156 AVIGEIWFAQEALAVFGHKFQAPIIGLISYGTPHTVSTYMGTPNLYSYMPDYKFAFPARM 215
++ +I V G K+ P + L T++ +P + R
Sbjct: 112 LIVYDIASW--PAPVLGRKWDIPFVQL--------SPTFVAYEGFEEDVPAVQDPTADRG 161
Query: 216 NFLQRLQNTILGVYTQLVGDWWYYPKLDGIMRDFANHSAELPHLTTLLRNVSTTFVYSDV 275
T D + H + P L+ + V
Sbjct: 162 EEAAAPAGTGDAEEGAEAEDGLV-RFFTRLSAFLEEHGVDTPATEFLIAP-NRCIVALPR 219
Query: 276 MLEYPRPQ-TSNLIHVGGIHLRNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMR 334
+ N VG + R V+ ++ GS D R
Sbjct: 220 TFQIKGDTVGDNYTFVGPTYGDRSHQGTWEGP---GDGRPVLLIALGSAFT--DHLDFYR 274
Query: 335 TLLVTAFSRTGLTVLW----RYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV 390
T L +A V+ + + +P NV + +W+PQ D+L FI+H G+
Sbjct: 275 TCL-SAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTK--ASAFITHAGM 331
Query: 391 NSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
S +EA+ +P++ VP +Q + IV+LG G + +T E + A V S+P
Sbjct: 332 GSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPG 391
Score = 131 bits (330), Expect = 4e-32
Identities = 66/372 (17%), Positives = 116/372 (31%), Gaps = 35/372 (9%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISEP 1896
+ +Q++A G V+ + N ++ + ++ P
Sbjct: 45 YAITDEFAAQVKAA--GATPVVYDSILPKESNPEESWPEDQ-ESAMGLFLDEAVRVL--P 99
Query: 1897 HFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIV 1956
+ R D+++ + LG +P + L + + +
Sbjct: 100 QLEDAYADDR--PDLIVYDIASW--PAPVLGRKWDIPFVQLSPTFVAYEGFE-------- 147
Query: 1957 SHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVESLL 2016
+P DR A + A V L
Sbjct: 148 EDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFFTRLSAFLEEHGVDTPATEFL 207
Query: 2017 RNISLSFVCTDVGLEYPRAQSG-NIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILYS 2075
+ V + G N +G + +R + +L +
Sbjct: 208 IAPNRCIVALPRTFQIKGDTVGDNYTFVGPTYGDR------SHQGTWEGPGDGRPVLLIA 261
Query: 2076 LGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQ----QVTELPSHVVQIKQWVPQI 2131
LGS T RT + ++ ++ + E+P +V + QWVPQ+
Sbjct: 262 LGSAF---TDHLDFYRTCLSAVDG-LDWHVVLSVGRFVDPADLGEVPPNVE-VHQWVPQL 316
Query: 2132 PILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNL 2191
IL FITH G+ S +EA+ VPMV +P +Q NA + VE GLG + +
Sbjct: 317 DILTK--ASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374
Query: 2192 TVESLGSLVSTI 2203
T E L V +
Sbjct: 375 TAEKLREAVLAV 386
Score = 128 bits (324), Expect = 2e-31
Identities = 58/287 (20%), Positives = 92/287 (32%), Gaps = 24/287 (8%)
Query: 1311 VLGHIFNAPVIHLAATGPYGNILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMI 1370
VLG ++ P + L+ T + +P +
Sbjct: 124 VLGRKWDIPFVQLSPT--------FVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEE 175
Query: 1371 RYVSRQVRNWFLDRMIEQNLGPGVP-PLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLA 1429
+ F R+ GV P L + C + + +
Sbjct: 176 GAEAEDGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIKGDTVGDNYTFV 235
Query: 1430 GIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLT 1489
G E +L +LGS T + L L
Sbjct: 236 GPTYGDRSHQGTWEGP-----GDGRPVLLIALGSAFTD---HLDFYRTCLSAVDGLDW-H 286
Query: 1490 ILWKWSGQP----LSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPV 1545
++ L +P NV +WVPQ+ +L FITH G+ S +E ++ VP+
Sbjct: 287 VVLSVGRFVDPADLGEVPPNVEVHQWVPQLDILTK--ASAFITHAGMGSTMEALSNAVPM 344
Query: 1546 VTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
V +P A+Q NA + VE G G + +T+E L A+ V DP
Sbjct: 345 VAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPG 391
Score = 73.2 bits (180), Expect = 3e-13
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
FITH G+ S +EA+ VPMV +P +Q NA + VE GLG +
Sbjct: 320 TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI 369
Score = 69.0 bits (169), Expect = 6e-12
Identities = 29/161 (18%), Positives = 44/161 (27%), Gaps = 56/161 (34%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFGDLKKTLDAATNGF 1687
FITH G+ S +EA+ +P++ +P A+Q NA G
Sbjct: 320 TKASAFITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELG--------------- 364
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVP 1747
LG I + E L R V
Sbjct: 365 ----LGRHIPRDQVTAEKL----------------------------REAVLA------- 385
Query: 1748 VLGGTLYKEQAMARSRILKDRLRSPLDTAVYWTEYVLQHGG 1788
V E+ A + +++ A E +L G
Sbjct: 386 VASDPGVAERLAAVRQEIRE--AGGARAAADILEGILAEAG 424
Score = 52.0 bits (125), Expect = 2e-06
Identities = 19/82 (23%), Positives = 26/82 (31%), Gaps = 11/82 (13%)
Query: 606 PWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----D 661
W+ + +LGS T A + VV D
Sbjct: 247 TWEG----PGDGRPVLLIALGSAF---TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPAD 299
Query: 662 LGNVPRNVILKPWAPQIPVLGH 683
LG VP NV + W PQ+ +L
Sbjct: 300 LGEVPPNVEVHQWVPQLDILTK 321
Score = 37.4 bits (87), Expect = 0.053
Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQP----LSGLPRNVVQQKWV 1743
+L +LGS T + L L ++ L +P NV +WV
Sbjct: 258 LLIALGSAFTD---HLDFYRTCLSAVDGLDW-HVVLSVGRFVDPADLGEVPPNVEVHQWV 313
Query: 1744 PQVPVL 1749
PQ+ +L
Sbjct: 314 PQLDIL 319
Score = 33.5 bits (77), Expect = 0.76
Identities = 5/36 (13%), Positives = 9/36 (25%), Gaps = 2/36 (5%)
Query: 724 SYKLAALKASRRFNDRQNSPLNTAIWWVEYVLRHHG 759
+ R+ A +E +L G
Sbjct: 391 GVAERLAAVRQEI--REAGGARAAADILEGILAEAG 424
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative,
MCSG, midwest center for structural genomics; HET: ABF;
1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB:
1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Length = 219
Score = 156 bits (398), Expect = 2e-43
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 30 KAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCL 89
+ V +S + + + + + DL L +DGADE++ ++ +IKGGG L
Sbjct: 41 TMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAAL 100
Query: 90 TQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPV 149
T+EKI+AS K + IAD +KQ LG K +P+EVIP+A V +++ GG+
Sbjct: 101 TREKIIASVAEKFICIADASKQVDILG---KFPLPVEVIPMARSAVARQLVK-LGGRPEY 156
Query: 150 RM 151
R
Sbjct: 157 RQ 158
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase,
northeast structural genomics consortium, IR21,
structural genomics, PSI; HET: CIT; 1.90A {Haemophilus
influenzae} SCOP: c.124.1.4 d.58.40.1
Length = 219
Score = 147 bits (374), Expect = 5e-40
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Query: 30 KAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCL 89
+ V S ++ +L+ K + + + L +DGADE++ ++IKGGG L
Sbjct: 41 TIKDKIQGAVAASKESEELLRKQGIEVFNANDVSSLDIYVDGADEINPQKMMIKGGGAAL 100
Query: 90 TQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPV 149
T+EKIVA+ K + I D +KQ LG + +P+EVIP+A V +K+ + GG
Sbjct: 101 TREKIVAALAKKFICIVDSSKQVDVLGSTFP--LPVEVIPMARSQVGRKLAAL-GGSPEY 157
Query: 150 RM 151
R
Sbjct: 158 RE 159
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics
center for infectious DI isomerase, ribose isomerase;
HET: R5P; 1.71A {Burkholderia thailandensis} PDB:
3u7j_A*
Length = 239
Score = 147 bits (373), Expect = 1e-39
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 4/124 (3%)
Query: 30 KAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCL 89
+ V +S + + + + + DL L +DGADE+DE+ +IKGGGG L
Sbjct: 53 AVKDRYRGAVSSSVATTERLKSHGIRVFDLNEIESLQVYVDGADEIDESGAMIKGGGGAL 112
Query: 90 TQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPV 149
T+EKIVAS V IAD +K+ LG + +P+EV+P+A + +++ GG +
Sbjct: 113 TREKIVASVAETFVCIADASKRVAMLG---QFPLPVEVVPMARTAIGRRLAA-LGGVPVL 168
Query: 150 RMAK 153
R+ +
Sbjct: 169 RVKQ 172
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119,
center for structu genomics of infectious diseases,
csgid; 2.32A {Francisella tularensis subsp}
Length = 224
Score = 146 bits (371), Expect = 2e-39
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 30 KAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDENLVLIKGGGGCL 89
V +S + + + + DL ++ IDGADE + + LIKGGG L
Sbjct: 47 NYRDKIKTVVSSSEDSTRKLKALGFDVVDLNYAGEIDLYIDGADECNNHKELIKGGGAAL 106
Query: 90 TQEKIVASCTPKLVIIADHTKQSKNLGDRYKKGIPIEVIPLAYVPVQKKIQTIFGGQAPV 149
T+EKI + K + I D +K+ LG +PIEVIP+A + ++I + GGQ
Sbjct: 107 TREKICVAAAKKFICIIDESKKVNTLG---NFPLPIEVIPMARSYIARQIVKL-GGQPVY 162
Query: 150 RM 151
R
Sbjct: 163 RE 164
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A
{Micromonospora echinospora}
Length = 402
Score = 133 bits (337), Expect = 3e-33
Identities = 78/449 (17%), Positives = 132/449 (29%), Gaps = 62/449 (13%)
Query: 808 SRILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP--FPPKQNLTNFKHVYVRNPAFN 865
IL F + H L LA RGH IT + F + + V ++
Sbjct: 5 RHIL-FANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVVLYKSEF-- 61
Query: 866 NREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRSKDAFDLAMVESTFH 925
+ E +Q + + + R + + DL + +
Sbjct: 62 -DTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEE------ALGD-NPPDLVVYDVFPF 113
Query: 926 QQTTVLLGHYFKCPVILMGSVSVDSNILESMGSPNVLSIMPEQLRPLSDRMTLTERIQNV 985
LL + P + + + S+ E + R
Sbjct: 114 I-AGRLLAARWDRPAVRLTG---------GFAANEHYSLFKELWKSNGQRHPADVE---A 160
Query: 986 YYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVS--FAFLYSNAALNYPFPNTP 1043
++ + + G+ G+ + + ++ +
Sbjct: 161 VHSVLVDLLGKY---------------GVDTPVKEYWDEIEGLTIVFLPKSFQPFAETFD 205
Query: 1044 -NIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAF 1102
VG R P + SLG+ P +AF
Sbjct: 206 ERFAFVGPTLTGR---DGQPGWQ---PPRPDAPVLLVSLGNQF---NEHPEFFRACAQAF 256
Query: 1103 SKYKYKVVWKWSGQ----DLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAV 1158
+ + VV G LG +P NV W P VLAH + +THG + LEA
Sbjct: 257 ADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAF 314
Query: 1159 HFGIPVITIPYFA-DQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAM 1217
G+P++ +P+FA + +A G G LR L AS+ A+ + DS +E+
Sbjct: 315 AAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAVRERVR 374
Query: 1218 ARSRILKDRLRSPLDTAVYWTEYVLQHEG 1246
R + A E L
Sbjct: 375 RMQRDILS--SGGPARAADEVEAYLGRVA 401
Score = 123 bits (310), Expect = 1e-29
Identities = 45/220 (20%), Positives = 74/220 (33%), Gaps = 17/220 (7%)
Query: 237 WYYPKLDGIMRDFANHSAELPHLTTLLRNVSTTFVYSDVMLEYPRPQ-TSNLIHVGGIHL 295
+ L ++ + + P T V+ + VG
Sbjct: 160 AVHSVLVDLLGKYG---VDTPVKEYWDEIEGLTIVFLPKSFQPFAETFDERFAFVGPTLT 216
Query: 296 RNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEG- 354
P V+ VS G+ + R AF+ T V+ G
Sbjct: 217 GRDGQPGWQPP---RPDAPVLLVSLGNQFN--EHPEFFRACA-QAFADTPWHVVMAIGGF 270
Query: 355 ---DSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYG- 410
+ LP NV +WIP VLAH R ++HG + LEA G+P++ VP +
Sbjct: 271 LDPAVLGPLPPNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFAT 328
Query: 411 DQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
+ +++LG G L + SI A + ++
Sbjct: 329 EAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSA 368
Score = 112 bits (282), Expect = 4e-26
Identities = 62/373 (16%), Positives = 114/373 (30%), Gaps = 52/373 (13%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISEP 1896
++T +++A G +V+ +D F + +L + N I+
Sbjct: 37 YVTTPLFADEVKAA--GAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAIL--R 92
Query: 1897 HFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIV 1956
+ D+V+ + + L P + L A
Sbjct: 93 AAEEALGDNP--PDLVVYDVFPFIAGRL-LAARWDRPAVRLTGGFA-------------- 135
Query: 1957 SHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVESLL 2016
E YS + + L ++G + E
Sbjct: 136 --ANEHYSLFKELWKSNGQRHPADVEAVHSVLVDL---------LGKYGVDTPVK-EYWD 183
Query: 2017 RNISLSFVCTDVGLEYPRAQSG-NIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILYS 2075
L+ V + +G G P +L S
Sbjct: 184 EIEGLTIVFLPKSFQPFAETFDERFAFVGPTL---TGRDGQPGW---QPPRPDAPVLLVS 237
Query: 2076 LGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQ----QVTELPSHVVQIKQWVPQI 2131
LG+ R + F+ + ++ G + LP +V + QW+P
Sbjct: 238 LGNQFNEHPE---FFRACAQAFAD-TPWHVVMAIGGFLDPAVLGPLPPNV-EAHQWIPFH 292
Query: 2132 PILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYF-YDQFQNAAKAVEFGLGIELSNKN 2190
+LAH + +THG + +EA GVP+V++P+F + +A + +E GLG L
Sbjct: 293 SVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350
Query: 2191 LTVESLGSLVSTI 2203
L S+ V +
Sbjct: 351 LEPASIREAVERL 363
Score = 110 bits (278), Expect = 1e-25
Identities = 55/287 (19%), Positives = 93/287 (32%), Gaps = 27/287 (9%)
Query: 1310 VVLGHIFNAPVIHLAATGPYGNILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTM 1369
+V+ +F L A P V + + SL + + +
Sbjct: 105 LVVYDVFPFIAGRLLA--------ARWDRP-AVRLTGGFAAN--EHYSLFKELWKSNGQR 153
Query: 1370 IRYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLA 1429
V + +D + + + V + +++ FL + +
Sbjct: 154 HPADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLP--KSFQPFAETFDERFAFV 211
Query: 1430 GIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSH-- 1487
G L +L SLG+ PE Q F
Sbjct: 212 GPTLTGRDGQ---PGW--QPPRPDAPVLLVSLGNQFNE---HPEFFRACAQAFADTPWHV 263
Query: 1488 -LTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVV 1546
+ I L LP NV +W+P VLAH + +THG + LE GVP+V
Sbjct: 264 VMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLV 321
Query: 1547 TIPFFA-DQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
+P FA + +A + +E G G L+ L ++ A+ + D
Sbjct: 322 LVPHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSA 368
Score = 66.7 bits (163), Expect = 4e-11
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYF-YDQFQNAAKAVEFGLGIELIPSSTKVN- 1889
+ + +THG + +EA GVP+V++P+F + +A + +E GLG L P +
Sbjct: 296 AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVLRPDQLEPAS 355
Query: 1890 -----REIISEPHF 1898
+ ++
Sbjct: 356 IREAVERLAADSAV 369
Score = 59.3 bits (144), Expect = 7e-09
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFA-DQYRNALLAERFGFG 1674
+ + +THG + LEA G+P++ +P+FA + +A G G
Sbjct: 296 AHARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLG 343
Score = 50.1 bits (120), Expect = 6e-06
Identities = 19/75 (25%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 613 LDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRN 668
+ SLG+ P +AF+ + VV G LG +P N
Sbjct: 226 PPRPDAPVLLVSLGNQF---NEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPN 282
Query: 669 VILKPWAPQIPVLGH 683
V W P VL H
Sbjct: 283 VEAHQWIPFHSVLAH 297
Score = 34.7 bits (80), Expect = 0.33
Identities = 18/76 (23%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 1680 LDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSH---LTILWKWSGQPLSGLPRN 1736
+L SLG+ PE Q F + I L LP N
Sbjct: 226 PPRPDAPVLLVSLGNQFNE---HPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPN 282
Query: 1737 VVQQKWVPQVPVLGGT 1752
V +W+P VL
Sbjct: 283 VEAHQWIPFHSVLAHA 298
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure
initiative, center for eukaryotic structural genomics;
HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB:
3iaa_A*
Length = 415
Score = 122 bits (307), Expect = 3e-29
Identities = 48/270 (17%), Positives = 91/270 (33%), Gaps = 29/270 (10%)
Query: 185 YGTPHTVSTYMGTPNLYSYMPDYKFAFPARMNFLQRLQNTILGVYTQLVGDWWYYPKLDG 244
+ P + N + ++ L L V+ + D L
Sbjct: 139 WRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPL------DLPVFRDTLRDLLAEHGLSR 192
Query: 245 IMRDFANHSAELPHLTTLLRNVSTTFVYSDVMLEYPRPQTSNLIHVGGIHLRNKKLPKDL 304
+ D NH +L V+ + + G +++ +
Sbjct: 193 SVVDCWNHVEQL------------NLVFVPKAFQIAGDTFDDRFVFVGPCFDDRRFLGEW 240
Query: 305 QDLMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVL----WRYEGDSIENL 360
D V+ VS G+ R AF V+ + + ++ +L
Sbjct: 241 TRPADD--LPVVLVSLGTTFN--DRPGFFRDC-ARAFDGQPWHVVMTLGGQVDPAALGDL 295
Query: 361 PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIV 420
P NV +W+P VL + ++HGG+ + +EA+++G P++ VP D R +
Sbjct: 296 PPNVEAHRWVPHVKVLEQ--ATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353
Query: 421 DLGAGVELSYFNITLESIAWATSIVLSNPR 450
LG G L +++ A V ++P
Sbjct: 354 QLGLGAVLPGEKADGDTLLAAVGAVAADPA 383
Score = 119 bits (301), Expect = 2e-28
Identities = 76/444 (17%), Positives = 131/444 (29%), Gaps = 61/444 (13%)
Query: 808 SRILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP--FPPKQNLTNFKHVYVRNPAFN 865
+ +L + + + + + L RGH ++ + F V ++ +
Sbjct: 21 AHLL-IVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAAGATVVPYQSEIID 79
Query: 866 NREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRSKDAFDLAMVESTFH 925
F HL L+ E L D DL + +
Sbjct: 80 ADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG----------DVPDLVLYDDFP- 128
Query: 926 QQTTVLLGHYFKCPVILMGSVSVDSNILESMGSPNVLSIMPEQLRPLSDRMTLTERIQNV 985
LL ++ P + + + E D +TL I +
Sbjct: 129 FIAGQLLAARWRRPAVRLSAAFA----------------SNEHYSFSQDMVTLAGTIDPL 172
Query: 986 YYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVSFAFLYSNAALNYPFPNTP-N 1044
R + + G ++ ++ A
Sbjct: 173 DLPVFRDTL---------RDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDR 223
Query: 1045 IEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSK 1104
VG +R L E + SLG+ P D RAF
Sbjct: 224 FVFVGPCFDDR---RFLGEWT---RPADDLPVVLVSLGTTF---NDRPGFFRDCARAFDG 274
Query: 1105 YKYKVVWKWSGQ----DLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHF 1160
+ VV GQ LG++P NV W P + VL + +THGG+ + +EA+++
Sbjct: 275 QPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQ--ATVCVTHGGMGTLMEALYW 332
Query: 1161 GIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARS 1220
G P++ +P D A ++ G G L +L A+ V D + A
Sbjct: 333 GRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPALLARVEA-- 390
Query: 1221 RILKDRLRS--PLDTAVYWTEYVL 1242
++ +R A E L
Sbjct: 391 --MRGHVRRAGGAARAADAVEAYL 412
Score = 111 bits (279), Expect = 1e-25
Identities = 57/290 (19%), Positives = 93/290 (32%), Gaps = 34/290 (11%)
Query: 1310 VVLGHIFNAPVIHLAATGPYGNILEAMGSPNIVSF----MPEIYSYLKSNMSLVERIQNF 1365
+VL F L A P + E YS+ + ++L I
Sbjct: 121 LVLYDDFPFIAGQLLA--------ARWRRPAVRLSAAFASNEHYSFSQDMVTLAGTIDPL 172
Query: 1366 HYTMIRYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNM 1425
+ R L G +D + ++ A + +
Sbjct: 173 DLPVFR----DTLRDLLAE-----HGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTFDDR 223
Query: 1426 VQLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKL 1485
G + L + T A +L SLG+ P + + F
Sbjct: 224 FVFVGPCFDDRRFL---GEW--TRPADDLPVVLVSLGTTFND---RPGFFRDCARAFDGQ 275
Query: 1486 SH---LTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYG 1542
+T+ + L LP NV +WVP V VL + +THGG+ + +E + +G
Sbjct: 276 PWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQ--ATVCVTHGGMGTLMEALYWG 333
Query: 1543 VPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
P+V +P D A + + G G L + L A+ V DP
Sbjct: 334 RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPA 383
Score = 108 bits (272), Expect = 9e-25
Identities = 67/372 (18%), Positives = 124/372 (33%), Gaps = 51/372 (13%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISEP 1896
++T GG + A G +V A LG+ + N ++
Sbjct: 53 YVTAGGFAEPVRAA--GATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVL--R 108
Query: 1897 HFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIV 1956
+ D+VL + + L P + L A+ A
Sbjct: 109 ATAEALDGDV--PDLVLYDDFPFIAGQL-LAARWRRPAVRLSAAFA-------------- 151
Query: 1957 SHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVESLL 2016
E YS D + + R LR A+ G + V+
Sbjct: 152 --SNEHYSFSQDMVTLAGTIDPLDLPVFRDTLRDL---------LAEHGLSRSV-VDCWN 199
Query: 2017 RNISLSFVCTDVGLEYPRAQ-SGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILYS 2075
L+ V + V +G +R + + D +L S
Sbjct: 200 HVEQLNLVFVPKAFQIAGDTFDDRFVFVGPCFDDR----RFLGEWTRPADD--LPVVLVS 253
Query: 2076 LGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQ----QVTELPSHVVQIKQWVPQI 2131
LG+ R F + + ++ GQ + +LP +V + +WVP +
Sbjct: 254 LGTTFNDRPG---FFRDCARAFDG-QPWHVVMTLGGQVDPAALGDLPPNV-EAHRWVPHV 308
Query: 2132 PILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNL 2191
+L + +THGG+ + +EA+++G P+V++P +D A + + GLG L +
Sbjct: 309 KVLEQ--ATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366
Query: 2192 TVESLGSLVSTI 2203
++L + V +
Sbjct: 367 DGDTLLAAVGAV 378
Score = 69.0 bits (169), Expect = 6e-12
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
+ +THGG+ + +EA+++G P+V++P +D A + + GLG L
Sbjct: 312 EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL 361
Score = 61.6 bits (150), Expect = 1e-09
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
+ +THGG+ + +EA+++G P++ +P D A ++ G G
Sbjct: 312 EQATVCVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLG 358
Score = 43.5 bits (103), Expect = 6e-04
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 623 FSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQ----DLGNVPRNVILKPWAPQI 678
SLG+ P D RAF + VV GQ LG++P NV W P +
Sbjct: 252 VSLGTTF---NDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHV 308
Query: 679 PVLGH 683
VL
Sbjct: 309 KVLEQ 313
Score = 33.9 bits (78), Expect = 0.67
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSH---LTILWKWSGQPLSGLPRNVVQQKWVP 1744
+L SLG+ P + + F +T+ + L LP NV +WVP
Sbjct: 250 VLVSLGTTFND---RPGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVP 306
Query: 1745 QVPVL 1749
V VL
Sbjct: 307 HVKVL 311
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU
initiative, center for eukaryotic structural genomics,
CESG fold; HET: TYD; 2.08A {Micromonospora echinospora}
PDB: 3oth_A*
Length = 412
Score = 119 bits (299), Expect = 3e-28
Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 24/252 (9%)
Query: 989 WVRLIFGRIEYHILDNQVASFVGP-----GIPPLESLFRNVSFAFLYSN-AALNYPFPNT 1042
+ GR L + V G+ F+ +L P
Sbjct: 154 TICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRA 213
Query: 1043 -PNIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRA 1101
P + + LP L D ++ +LG+ +L
Sbjct: 214 RPRRHELRPVPFAE--QGDLPAWLSSR--DTARPLVYLTLGTSS---GGTVEVLRAAIDG 266
Query: 1102 FSKYKYKVV----WKWSGQDLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEA 1157
+ V+ LG VP NV L+ W PQ +L H L + HGG + L A
Sbjct: 267 LAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPH--VDLVVHHGGSGTTLGA 324
Query: 1158 VHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAM 1217
+ G+P ++ P+ D + NA + G G L N+S S+ A + + Y+ A
Sbjct: 325 LGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGAR 384
Query: 1218 ARSRILKDRLRS 1229
A + + +
Sbjct: 385 A----VAAEIAA 392
Score = 114 bits (287), Expect = 9e-27
Identities = 36/181 (19%), Positives = 73/181 (40%), Gaps = 15/181 (8%)
Query: 277 LEYPRPQT-SNLIHVGGIHLRNKKLPKDLQDLMDSATRG--VIYVSFGSLIRPSRMSDSM 333
L+ P + + + DL + S ++Y++ G+ + +
Sbjct: 206 LQEPEFRARPRRHELRPVPFA---EQGDLPAWLSSRDTARPLVYLTLGTS--SGGTVEVL 260
Query: 334 RTLLVTAFSRTG----LTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG 389
R + + + + + +P NV + W+PQ +L H L + HGG
Sbjct: 261 RAA-IDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALLPH--VDLVVHHGG 317
Query: 390 VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLSNP 449
+ L A+ G+P + P+ GD ++ + + GAG L NI+ +S++ A +L+
Sbjct: 318 SGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEE 377
Query: 450 R 450
Sbjct: 378 S 378
Score = 100 bits (252), Expect = 3e-22
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 14/205 (6%)
Query: 1393 GVPPLDSLLRNISMCFLYAEP-ALEYPYPMA-PNMVQLAGIHLQRNKTLTLSEDLKKTLD 1450
G+ + F+ P +L+ P A P +L + L + D
Sbjct: 183 GLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQGDL---PAWLSSRD 239
Query: 1451 AATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSH---LTILWKWSGQPLSGLPRNVV 1507
A + +LG+ E+L + L + L +P NV
Sbjct: 240 TARP-LVYLTLGTSSGG---TVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVR 295
Query: 1508 QQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFG 1567
+ WVPQ +L H L + HGG + L + GVP ++ P+ D F+NA + G G
Sbjct: 296 LESWVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAG 353
Query: 1568 VFLKITNLTSEALEWAITTVIGDPR 1592
L N++ +++ A ++ +
Sbjct: 354 DHLLPDNISPDSVSGAAKRLLAEES 378
Score = 94.0 bits (234), Expect = 5e-20
Identities = 61/384 (15%), Positives = 114/384 (29%), Gaps = 78/384 (20%)
Query: 1836 LFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISE 1895
F T G + + G V F A+ + T + +
Sbjct: 52 TFATGEGFAGTLRKL--GFEPV--ATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQ 107
Query: 1896 PHFNN------------LIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAH 1943
F +I R D+V+ E G+P I G
Sbjct: 108 IVFGRVIPQRVFDELQPVIERLR--PDLVVQEISNY--GAGLAALKAGIPTICHGVGRDT 163
Query: 1944 ADILDVMGSPNIVSHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQ 2003
D D IE + +A +
Sbjct: 164 PD----------------------DLTRSIEEEVR--------------------GLAQR 181
Query: 2004 FGANVLPSVESLLRNISLSFVCTDVGLEYPRAQSG-NIVPIGGIHIERNGNLSLPEDIQK 2062
G ++ P N + L+ P ++ + + G
Sbjct: 182 LGLDLPPGRIDGFGNPFI--DIFPPSLQEPEFRARPRRHELRPVPFAEQG---DLPAWLS 236
Query: 2063 TLDSASQGFILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQQVT---ELPS 2119
+ D ++ + +LG+ + R ++ + + ++ V+ E+P+
Sbjct: 237 SRD-TARPLVYLTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPA 292
Query: 2120 HVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVE 2179
+V ++ WVPQ +L H L + HGG + + A+ GVP + P+ D F NA +
Sbjct: 293 NVR-LESWVPQAALLPH--VDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ 349
Query: 2180 FGLGIELSNKNLTVESLGSLVSTI 2203
G G L N++ +S+ +
Sbjct: 350 AGAGDHLLPDNISPDSVSGAAKRL 373
Score = 66.6 bits (163), Expect = 4e-11
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN-- 1889
P+ L + HGG + + A+ GVP + P+ D F NA + G G L+P + +
Sbjct: 307 PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSV 366
Query: 1890 ----REIISEPHF 1898
+ +++E +
Sbjct: 367 SGAAKRLLAEESY 379
Score = 57.8 bits (140), Expect = 2e-08
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P+ L + HGG + L A+ G+P ++ P+ D + NA + G G
Sbjct: 307 PHVDLVVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAG 353
Score = 40.8 bits (96), Expect = 0.005
Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 7/65 (10%)
Query: 623 FSLGSVMEPKTIDPVLLADLFRAFSKYKYKVV----WKWSGQDLGNVPRNVILKPWAPQI 678
+LG+ +L + V+ LG VP NV L+ W PQ
Sbjct: 247 LTLGTSS---GGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQA 303
Query: 679 PVLGH 683
+L H
Sbjct: 304 ALLPH 308
Score = 33.9 bits (78), Expect = 0.70
Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSH---LTILWKWSGQPLSGLPRNVVQQKWVP 1744
+ +LG+ E+L + L + L +P NV + WVP
Sbjct: 245 VYLTLGTSSGG---TVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVP 301
Query: 1745 QVPVL 1749
Q +L
Sbjct: 302 QAALL 306
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A
{Saccharopolyspora erythraea}
Length = 441
Score = 111 bits (280), Expect = 1e-25
Identities = 37/235 (15%), Positives = 81/235 (34%), Gaps = 13/235 (5%)
Query: 220 RLQNTILGVYTQLVGDWWYYPKLDGIMRDFANHSAELPHLTTLLRNVSTTFVYSDVMLEY 279
R + LG+ + P + + + ++ +
Sbjct: 180 RARQNFLGLLPDQPEEHREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAP------- 232
Query: 280 PRPQTSNLIHVGGIHLRNKKLPKDLQD-LMDSATRGVIYVSFGSLIRPSRMSDSMRTLLV 338
+ + G+ + P + + L D R + ++ G R + + L+
Sbjct: 233 AAIRLDTGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELL 292
Query: 339 TAFSRTGLTVLWRY---EGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALE 395
A ++ + + + + N+P NV ++P +L C + HGG S
Sbjct: 293 GAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPT--CAATVHHGGPGSWHT 350
Query: 396 AIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
A +G+P + +P D + + GAG+ L +T + + + VL +P
Sbjct: 351 AAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPA 405
Score = 111 bits (278), Expect = 2e-25
Identities = 69/444 (15%), Positives = 131/444 (29%), Gaps = 69/444 (15%)
Query: 809 RILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP-----------------FPPKQNL 851
R++ F + + SH L A GH + + + +
Sbjct: 22 RVV-FSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAAGLTAVPVGTDVDLV 80
Query: 852 TNFKHVYVRNPAFNNREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRS 911
H + D + W HL ++ T + D + + ++
Sbjct: 81 DFMTHAGHDIIDYVRSLDFSERDPATLTWEHLLGMQTV-LTPTFYALMSPDTLIEGMVSF 139
Query: 912 KDAF--DLAMVESTFHQQTTVLLGHYFKCPVILMGSVSVDSNILESMGSPNVLSIMPEQL 969
+ DL + E + P + G L
Sbjct: 140 CRKWRPDLVIWEPLTF--AAPIAAAVTGTPHARL-----------LWGPDITTRARQNFL 186
Query: 970 RPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVSFAFL 1029
L D+ E ++ W+ + G P F
Sbjct: 187 GLLPDQPE--EHREDPLAEWLTWTLEKY---------------GGPA----FDEEVVVGQ 225
Query: 1030 YSNAALNYPFPNTPNIEHVGGIHIERYKNTTLPEDLKQIL-DDAHEGFIWFSLGSVMEPK 1088
++ ++ VG RY + P + + L D+ + +LG
Sbjct: 226 WTIDPAPAAIRLDTGLKTVG----MRYVDYNGPSVVPEWLHDEPERRRVCLTLGISSREN 281
Query: 1089 TIDPVLLADLFRAFSKYKYKVVWKWSGQD---LGNVPRNVILKPWAPQIPVLAHPNCKLF 1145
+I V + +L A +++ + Q + N+P NV + P +L C
Sbjct: 282 SIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPT--CAAT 339
Query: 1146 ITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAIST 1205
+ HGG S A G+P + +P D A + FG G+ L L+ L ++
Sbjct: 340 VHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKR 399
Query: 1206 VTTDSRYKEQAMARSRILKDRLRS 1229
V D ++ A ++D + +
Sbjct: 400 VLDDPAHRAGAAR----MRDDMLA 419
Score = 102 bits (256), Expect = 1e-22
Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 15/224 (6%)
Query: 1371 RYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAG 1430
+ + W + + + I A+ + +
Sbjct: 195 EHREDPLAEWLTWTLEKYGGPAFDEEVVVGQWTIDPAP----AAIRLD----TGLKTVGM 246
Query: 1431 IHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTI 1490
++ N + E L D + +LG +I + LL + I
Sbjct: 247 RYVDYNGPSVVPEWLH---DEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEII 303
Query: 1491 LWKWSGQP--LSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTI 1548
+ Q ++ +P NV +VP +L C + HGG S +GVP V +
Sbjct: 304 ATFDAQQLEGVANIPDNVRTVGFVPMHALLPT--CAATVHHGGPGSWHTAAIHGVPQVIL 361
Query: 1549 PFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
P D A + EFG G+ L + LT + L ++ V+ DP
Sbjct: 362 PDGWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPA 405
Score = 98.7 bits (246), Expect = 2e-21
Identities = 67/373 (17%), Positives = 122/373 (32%), Gaps = 29/373 (7%)
Query: 1836 LFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISE 1895
+ L I A G+ V + D A + ++ + ++
Sbjct: 52 RVVASPALTEDITAA--GLTAVPVGTDVDLVDFMTHAGHDIIDYVRSLDFSERDPATLTW 109
Query: 1896 PHFNNLIRSGRGS-FDIVLAEPLFGQEATVYLGHALGVPLINLGASA-AHADILDVMGSP 1953
H + + + ++ + L E V L+ A V G+P
Sbjct: 110 EHLLGMQTVLTPTFYALMSPDTLI--EGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTP 167
Query: 1954 NIVSHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVE 2013
+ + R NF+ + L W W ++G E
Sbjct: 168 -HARLLWGPDITTRARQNFLGLLPDQPEEHREDPLAEWLTW-----TLEKYGGPAFDE-E 220
Query: 2014 SLLRNISLSFVCTDVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFIL 2073
++ ++ + + +G +++ NG +PE + D + +
Sbjct: 221 VVVGQWTIDPAPA--AIRLDT----GLKTVGMRYVDYNGPSVVPEWLH---DEPERRRVC 271
Query: 2074 YSLGSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQQ---VTELPSHVVQIKQWVPQ 2130
+LG + + L+ + +II ++ QQ V +P +V +VP
Sbjct: 272 LTLGISSRENSIGQVSIEELLGAVGD-VDAEIIATFDAQQLEGVANIPDNVR-TVGFVPM 329
Query: 2131 IPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKN 2190
+L C + HGG S A GVP VI+P +D A + EFG GI L
Sbjct: 330 HALLPT--CAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPE 387
Query: 2191 LTVESLGSLVSTI 2203
LT + L V +
Sbjct: 388 LTPDQLRESVKRV 400
Score = 64.8 bits (158), Expect = 2e-10
Identities = 21/50 (42%), Positives = 25/50 (50%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
P C + HGG S A GVP VI+P +D A + EFG GI L
Sbjct: 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL 383
Score = 56.0 bits (135), Expect = 8e-08
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P C + HGG S A G+P + +P D A + FG G
Sbjct: 334 PTCAATVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAG 380
Score = 44.0 bits (104), Expect = 4e-04
Identities = 16/97 (16%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 591 PSRRGWTFCNACRIRPWDLKQIL-DDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKY 649
+ P + + L D+ + +LG +I V + +L A
Sbjct: 239 TGLKTVGMRYVDYNGPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDV 298
Query: 650 KYKVVWKWSGQD---LGNVPRNVILKPWAPQIPVLGH 683
+++ + Q + N+P NV + P +L
Sbjct: 299 DAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALLPT 335
Score = 34.0 bits (78), Expect = 0.55
Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Query: 1681 DAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILWKWSGQP--LSGLPRNVV 1738
D + +LG +I + LL + I + Q ++ +P NV
Sbjct: 263 DEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVR 322
Query: 1739 QQKWVPQVPVL 1749
+VP +L
Sbjct: 323 TVGFVPMHALL 333
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin,
teicoplanin, ORF1, natural products, antibiotic; HET:
UDP; 1.15A {Amycolatopsis orientalis} PDB: 3h4i_A*
1pn3_A* 1pnv_A*
Length = 404
Score = 106 bits (267), Expect = 3e-24
Identities = 38/181 (20%), Positives = 69/181 (38%), Gaps = 10/181 (5%)
Query: 270 FVYSDVMLEYPRPQTSNLIHVGGIHL-RNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSR 328
++ +D +L RP + G L + L +L+ + + + +YV FGS P
Sbjct: 178 WLAADPVLSPLRPTDLGTVQTGAWILPDQRPLSAELEGFLRAGSP-PVYVGFGSGPAP-- 234
Query: 329 MSDSMRTLLVTAFSRTGLTVL--WRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFIS 386
+ + A G V+ + G + + + + Q + +
Sbjct: 235 --AEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF--GRVAAVVH 290
Query: 387 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 446
HGG + G P + VP DQ + + DLG GV T+ES++ A + L
Sbjct: 291 HGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATAL 350
Query: 447 S 447
+
Sbjct: 351 T 351
Score = 100 bits (250), Expect = 4e-22
Identities = 43/226 (19%), Positives = 71/226 (31%), Gaps = 11/226 (4%)
Query: 1366 HYTMIRYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNM 1425
M + ++ ++ P V L +L A+P L P
Sbjct: 137 ERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQP-WLAADPVLSPLRPTDLGT 195
Query: 1426 VQLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKL 1485
VQ L + L S +L+ L A + + GS P E ++
Sbjct: 196 VQTGAWILPDQRPL--SAELEGFLRAGSP-PVYVGFGSG----PAPAEAARVAIEAVRAQ 248
Query: 1486 S-HLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVP 1544
+ + W+G + + V + + HGG + G P
Sbjct: 249 GRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF--GRVAAVVHHGGAGTTTAVTRAGAP 306
Query: 1545 VVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGD 1590
V +P ADQ A + + G GV T E+L A+ T +
Sbjct: 307 QVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALTP 352
Score = 99.2 bits (247), Expect = 1e-21
Identities = 45/247 (18%), Positives = 77/247 (31%), Gaps = 17/247 (6%)
Query: 976 MTLTERIQNVYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLF--RNVSFAFLYSNA 1033
L R+ +++ AS G+PP+E L+ +L ++
Sbjct: 127 DHLPSEQSQAERDMYNQGADRLFGDAVNSHRASI---GLPPVEHLYDYGYTDQPWLAADP 183
Query: 1034 ALNYPFPNTPNIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPV 1093
L+ P G + L +L+ L A ++ GS P
Sbjct: 184 VLSPLRPTDLGTVQTGAWILPD--QRPLSAELEGFLR-AGSPPVYVGFGSGPAP----AE 236
Query: 1094 LLADLFRAFSKYKYKVV--WKWSGQDLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGL 1151
A +VV W+G + + ++ + + HGG
Sbjct: 237 AARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF--GRVAAVVHHGGA 294
Query: 1152 NSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSR 1211
+ G P + +P ADQ A G GV + SL A++T T
Sbjct: 295 GTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALTP-G 353
Query: 1212 YKEQAMA 1218
+ +A A
Sbjct: 354 IRARAAA 360
Score = 87.2 bits (216), Expect = 9e-18
Identities = 51/298 (17%), Positives = 85/298 (28%), Gaps = 46/298 (15%)
Query: 1910 DIVLAEPLFGQE-ATVYLGHALGVPLINLGASAAHADILDVMGSPNIVSHMPEFYSSLTD 1968
D V+ L A + LG+P P+ S
Sbjct: 94 DAVVTTGLLPAAVAVRSMAEKLGIPYR-------------------YTVLSPDHLPSEQS 134
Query: 1969 RMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANVLPSVESL--LRNISLSFVCT 2026
+ R + + + LP VE L ++
Sbjct: 135 QA-------------ERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAA 181
Query: 2027 DVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFILYSLGSIMKSETAP 2086
D L R V G + L +++ L + S + GS AP
Sbjct: 182 DPVLSPLRPTDLGTVQTGAWILPDQR--PLSAELEGFLRAGSP-PVYVGFGSG----PAP 234
Query: 2087 DTLARTLVETFSKFENYKII-WIWNGQQVTELPSHVVQIKQWVPQIPILAHPNCKLFITH 2145
AR +E ++ W G + + + V + + H
Sbjct: 235 AEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVV-GEVNHQVLF--GRVAAVVHH 291
Query: 2146 GGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTI 2203
GG + G P V++P DQ A + + G+G+ TVESL + ++T
Sbjct: 292 GGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATA 349
Score = 57.6 bits (139), Expect = 3e-08
Identities = 13/60 (21%), Positives = 22/60 (36%)
Query: 1831 HPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNR 1890
+ HGG + G P V++P DQ A + + G+G+ + V
Sbjct: 282 FGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVES 341
Score = 51.0 bits (122), Expect = 3e-06
Identities = 21/116 (18%), Positives = 33/116 (28%), Gaps = 13/116 (11%)
Query: 1562 VEFGFG---VFLKITNLTSEALEWAITTVIGDPRGHHITMYSPFPPKQNLTNFKHVHVQN 1618
V GFG + + EA+ R + ++ + V N
Sbjct: 224 VYVGFGSGPAPAEAARVAIEAVR------AQGRRVVLSSGWAGLGRIDEGDDCLVVGEVN 277
Query: 1619 QAFDNIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
+ + HGG + G P + +P ADQ A G G
Sbjct: 278 HQ----VLFGRVAAVVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVG 329
Score = 32.2 bits (73), Expect = 2.2
Identities = 7/63 (11%), Positives = 16/63 (25%), Gaps = 5/63 (7%)
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLS-HLTILWKWSGQPLSGLPRNVVQQKWVPQV 1746
+ GS P E ++ + + W+G + + V
Sbjct: 224 VYVGFGSG----PAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQ 279
Query: 1747 PVL 1749
+
Sbjct: 280 VLF 282
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis
orientalis} SCOP: c.87.1.5
Length = 415
Score = 105 bits (264), Expect = 7e-24
Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 10/181 (5%)
Query: 270 FVYSDVMLEYPRPQTSNLIHVGGIHLR-NKKLPKDLQDLMDSATRGVIYVSFGSLIRPSR 328
+V +D +L +P + + G L + L +L +D+ +Y+ FGSL P+
Sbjct: 195 WVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAG-PPPVYLGFGSLGAPAD 253
Query: 329 MSDSMRTLLVTAFSRTGLTVLW--RYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFIS 386
+ + A G V+ + + + + + Q + I
Sbjct: 254 A----VRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF--GRVAAVIH 307
Query: 387 HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 446
HGG + A G P I +P DQ + + +LG GV T +S++ A + L
Sbjct: 308 HGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATAL 367
Query: 447 S 447
+
Sbjct: 368 T 368
Score = 104 bits (262), Expect = 1e-23
Identities = 60/424 (14%), Positives = 117/424 (27%), Gaps = 49/424 (11%)
Query: 832 LAARGHHITMYSPFPPKQNLTNFKHVYVRNPAFNNREYSPFEDCRQIGWFHLSAYDSLEF 891
+ G + M +P + + + P R + + E
Sbjct: 24 VRDLGADVRMCAP-------PDCAE-RLAEVGVPHVPVGP--SARA--PIQRAKPLTAED 71
Query: 892 TLKVNREILADPIFQILIRSKDAFDLAMVESTFHQQTT-VLLGHYFKCPVILMGSVSVDS 950
+ E +A F + + + + + P
Sbjct: 72 VRRFTTEAIAT-QFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV 130
Query: 951 NILESMGSPNVLSIMPEQLRPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVASFV 1010
S P P + + + +L++ +
Sbjct: 131 P---SPYYPPPPLGEPSTQDTIDIPAQ---------WERNNQSAYQRYGGLLNSHRDAI- 177
Query: 1011 GPGIPPLESLF--RNVSFAFLYSNAALNYPFPNTPNIEHVGGIHIERYKNTTLPEDLKQI 1068
G+PP+E +F ++ ++ L P + G + L +L
Sbjct: 178 --GLPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPD--ERPLSPELAAF 233
Query: 1069 LDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVW--KWSGQDLGNVPRNVI 1126
LD A ++ GS+ P + A + +V+ W+ L + +
Sbjct: 234 LD-AGPPPVYLGFGSLGAPAD----AVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCF 288
Query: 1127 LKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFG 1186
+ I HGG + A G P I +P ADQ A G G
Sbjct: 289 AIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVG 346
Query: 1187 VTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKDRLRSP--LDTAVYWTEYVLQH 1244
V + SL A++T T + AR+ + +R+ A + V +
Sbjct: 347 VAHDGPIPTFDSLSAALATALTP-----ETHARATAVAGTIRTDGAAVAARLLLDAVSRE 401
Query: 1245 EGAL 1248
+ +
Sbjct: 402 KPTV 405
Score = 103 bits (257), Expect = 6e-23
Identities = 53/296 (17%), Positives = 87/296 (29%), Gaps = 27/296 (9%)
Query: 1305 RDEVTVVLGHIFNAPVIHLAATGPYGNILEAMGSPNI-VSFMP------EIYSYLKSNMS 1357
V G + A + A E +G P P S
Sbjct: 93 GCAAVVTTGLLAAAIGVRSVA--------EKLGIPYFYAFHCPSYVPSPYYPPPPLGEPS 144
Query: 1358 LVERIQNF-HYTMIRYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALE 1416
+ I + + Q L+ + P V + + ++ A+P L
Sbjct: 145 TQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTDHP-WVAADPVLA 203
Query: 1417 YPYPMAPNMVQLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLN 1476
P + VQ L + L+ +L LDA + GS+ P + +
Sbjct: 204 PLQPTDLDAVQTGAWILPDERPLS--PELAAFLDAGP-PPVYLGFGSL----GAPADAVR 256
Query: 1477 NLLQVFTKLSHLTILWK-WSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQ 1535
+ IL + W+ L + V + I HGG +
Sbjct: 257 VAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTT 314
Query: 1536 LETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDP 1591
G P + +P ADQ A + E G GV T ++L A+ T +
Sbjct: 315 HVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPE 370
Score = 92.6 bits (230), Expect = 2e-19
Identities = 59/378 (15%), Positives = 107/378 (28%), Gaps = 55/378 (14%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISEP 1896
++ GVP V P A+A + E I+
Sbjct: 33 MCAPPDCAERLAE--VGVPHV--PVGPS-----ARAPIQRAKPLTAEDVRRFTTEAIAT- 82
Query: 1897 HFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIV 1956
F+ + + G +V L + LG+P
Sbjct: 83 QFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYF-------------------YA 123
Query: 1957 SHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANV-------- 2008
H P + S + + + + + ++G +
Sbjct: 124 FHCPSYVPS----PYYPPPPLGEPSTQDTIDIPAQ-WERNNQSAYQRYGGLLNSHRDAIG 178
Query: 2009 LPSVESL--LRNISLSFVCTDVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDS 2066
LP VE + +V D L + + V G + L ++ LD+
Sbjct: 179 LPPVEDIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPL--SPELAAFLDA 236
Query: 2067 ASQGFILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWI-WNGQQVTELPSHVVQIK 2125
+ GS+ AP R ++ I+ W + + + I
Sbjct: 237 GP-PPVYLGFGSL----GAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAI- 290
Query: 2126 QWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIE 2185
V + I HGG + A G P +++P DQ A + E G+G+
Sbjct: 291 GEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVA 348
Query: 2186 LSNKNLTVESLGSLVSTI 2203
T +SL + ++T
Sbjct: 349 HDGPIPTFDSLSAALATA 366
Score = 58.3 bits (141), Expect = 2e-08
Identities = 14/60 (23%), Positives = 22/60 (36%)
Query: 1831 HPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNR 1890
I HGG + A G P +++P DQ A + E G+G+ +
Sbjct: 299 FGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDS 358
Score = 51.4 bits (123), Expect = 2e-06
Identities = 15/48 (31%), Positives = 17/48 (35%)
Query: 1627 HPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
I HGG + A G P I +P ADQ A G G
Sbjct: 299 FGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVG 346
Score = 34.4 bits (79), Expect = 0.43
Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 7/91 (7%)
Query: 595 GWTFCNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVV 654
G R +L LD A ++ GS+ P + A + +V+
Sbjct: 216 GAWILPDERPLSPELAAFLD-AGPPPVYLGFGSLGAPAD----AVRVAIDAIRAHGRRVI 270
Query: 655 W--KWSGQDLGNVPRNVILKPWAPQIPVLGH 683
W+ L + + + G
Sbjct: 271 LSRGWADLVLPDDGADCFAIGEVNHQVLFGR 301
Score = 32.1 bits (73), Expect = 2.3
Identities = 10/87 (11%), Positives = 21/87 (24%), Gaps = 12/87 (13%)
Query: 1671 FGFGDLKKTLDAATNGF-------ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILW 1723
++ L F + GS+ P + + + IL
Sbjct: 217 AWILPDERPLSPELAAFLDAGPPPVYLGFGSL----GAPADAVRVAIDAIRAHGRRVILS 272
Query: 1724 K-WSGQPLSGLPRNVVQQKWVPQVPVL 1749
+ W+ L + V +
Sbjct: 273 RGWADLVLPDDGADCFAIGEVNHQVLF 299
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC;
1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Length = 391
Score = 105 bits (263), Expect = 9e-24
Identities = 31/149 (20%), Positives = 55/149 (36%), Gaps = 7/149 (4%)
Query: 307 LMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLW---RYEGDSIENLPGN 363
+ + + G ++ + + + A G+ + + +LP N
Sbjct: 212 GAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDN 271
Query: 364 VHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLG 423
I + +P L C L I GG +A A GIP + +P Y DQ + R++ G
Sbjct: 272 ARIAESVPLNLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAG 329
Query: 424 AGVELSYFNITL--ESIAWATSIVLSNPR 450
AG+ L E + + VL +
Sbjct: 330 AGICLPDEQAQSDHEQFTDSIATVLGDTG 358
Score = 96.8 bits (241), Expect = 6e-21
Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 11/166 (6%)
Query: 1069 LDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVW---KWSGQDLGNVPRNV 1125
+ +G ++ T LL + A + V L ++P N
Sbjct: 213 AARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNA 272
Query: 1126 ILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGF 1185
+ P L C+L I GG + A GIP + +P + DQ+ A G
Sbjct: 273 RIAESVPLNLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330
Query: 1186 GVTLR--NTNLSEASLDWAISTVTTDSRYKEQAMARSRILKDRLRS 1229
G+ L +I+TV D+ + A L D + +
Sbjct: 331 GICLPDEQAQSDHEQFTDSIATVLGDTGFAAAA----IKLSDEITA 372
Score = 91.4 bits (227), Expect = 3e-19
Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 6/140 (4%)
Query: 1457 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILW--KWSGQPLSGLPRNVVQQKWVPQ 1514
+ +G ++ T P LL + ++ L+ LP N + VP
Sbjct: 221 VCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNARIAESVPL 280
Query: 1515 VPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITN 1574
L C+L I GG + G+P + +P + DQF A G G+ L
Sbjct: 281 NLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQ 338
Query: 1575 LTS--EALEWAITTVIGDPR 1592
S E +I TV+GD
Sbjct: 339 AQSDHEQFTDSIATVLGDTG 358
Score = 82.5 bits (204), Expect = 3e-16
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
Query: 2072 ILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWI--WNGQQVTELPSHVVQIKQWVP 2129
+ +G ++ + T P L R + +I + + +T+LP + I + VP
Sbjct: 221 VCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNAR-IAESVP 279
Query: 2130 QIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNK 2189
L C+L I GG + A G+P +++P ++DQF A G GI L ++
Sbjct: 280 LNLFLRT--CELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDE 337
Query: 2190 NLTV--ESLGSLVSTI 2203
E ++T+
Sbjct: 338 QAQSDHEQFTDSIATV 353
Score = 66.7 bits (163), Expect = 3e-11
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNRE 1891
C+L I GG + A G+P +++P ++DQF A G GI L + + E
Sbjct: 285 RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHE 344
Query: 1892 IISE 1895
++
Sbjct: 345 QFTD 348
Score = 56.3 bits (136), Expect = 6e-08
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
C+L I GG + A GIP + +P + DQ+ A G G
Sbjct: 285 RTCELVICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAG 331
Score = 39.0 bits (91), Expect = 0.018
Identities = 12/96 (12%), Positives = 24/96 (25%), Gaps = 7/96 (7%)
Query: 591 PSRRGWTFCNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYK 650
+ + + W + +G ++ T LL + A
Sbjct: 195 APVQYVPYNGSGAFPAW----GAARTSARRVCICMGRMVLNATGPAPLLRAVAAATELPG 250
Query: 651 YKVVW---KWSGQDLGNVPRNVILKPWAPQIPVLGH 683
+ V L ++P N + P L
Sbjct: 251 VEAVIAVPPEHRALLTDLPDNARIAESVPLNLFLRT 286
Score = 32.1 bits (73), Expect = 2.3
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 2/64 (3%)
Query: 1688 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILW--KWSGQPLSGLPRNVVQQKWVPQ 1745
+ +G ++ T P LL + ++ L+ LP N + VP
Sbjct: 221 VCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEHRALLTDLPDNARIAESVPL 280
Query: 1746 VPVL 1749
L
Sbjct: 281 NLFL 284
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati
enzyme discovery for natural product biosynthesis,
natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Length = 398
Score = 103 bits (258), Expect = 5e-23
Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 10/152 (6%)
Query: 307 LMDSATRGVIYVSFGSLI--RPSRMSDSMRTLL---VTAFSRTGLTVLW---RYEGDSIE 358
+ + + + ++FG+ + + +LL + G V+ +++
Sbjct: 221 VFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ 280
Query: 359 NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRH 418
LP V P ++ C + + HGG + L + G+P + VP + R
Sbjct: 281 PLPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARL 338
Query: 419 IVDLGAGVELSYFNITLESIAWATSIVLSNPR 450
+ GAGVE+ + +ES+ A + + +
Sbjct: 339 LHAAGAGVEVPWEQAGVESVLAACARIRDDSS 370
Score = 98.3 bits (245), Expect = 2e-21
Identities = 41/255 (16%), Positives = 88/255 (34%), Gaps = 31/255 (12%)
Query: 989 WVRLIFGRIEYHILDNQVASFVGP-----GIPPLESLFRNVSFAFLYSNAALNYP-FPNT 1042
W+ ++ + + P G+ ++ ++ P T
Sbjct: 147 WIEQSIRLASPELIKSAGVGELAPELAELGLTDFPDPLLSIDVCP----PSMEAQPKPGT 202
Query: 1043 PNIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPV-----LLAD 1097
+ +V N + + ++ + + + G+ + + + LL
Sbjct: 203 TKMRYVPY-------NGRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255
Query: 1098 LFRAFSKYKYKVVW---KWSGQDLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQ 1154
L + K ++VV Q L +P V+ P ++ C + + HGG +
Sbjct: 256 LSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTT 313
Query: 1155 LEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKE 1214
L + G+P +++P A+ + +A L G GV + S+ A + + DS Y
Sbjct: 314 LTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYVG 373
Query: 1215 QAMARSRILKDRLRS 1229
A R L + +
Sbjct: 374 NA----RRLAAEMAT 384
Score = 90.9 bits (226), Expect = 5e-19
Identities = 37/225 (16%), Positives = 79/225 (35%), Gaps = 19/225 (8%)
Query: 1375 RQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAGIHLQ 1434
+++ + + + G+ L +I +C P++E ++ + +
Sbjct: 158 ELIKSAGVGELAPELAELGLTDFPDPLLSIDVCP----PSMEAQPKPGTTKMRYVPYNGR 213
Query: 1435 RNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTI-----PPELLNNLLQVFTKLSHLT 1489
++ + + + + G+ + LL L Q KL
Sbjct: 214 NDQVPSW------VFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEV 267
Query: 1490 ILW--KWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVT 1547
++ Q L LP V+ P ++ C + + HGG + L ++ GVP V+
Sbjct: 268 VVAVSDKLAQTLQPLPEGVLAAGQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVS 325
Query: 1548 IPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPR 1592
+P A+ + +A G GV + E++ A + D
Sbjct: 326 VPVIAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSS 370
Score = 80.5 bits (199), Expect = 1e-15
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 2109 WNGQQVTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFY 2168
Q + LP V+ P I+ C + + HGG + + + GVP V +P
Sbjct: 274 KLAQTLQPLPEGVLAA-GQFPLSAIMPA--CDVVVHHGGHGTTLTCLSEGVPQVSVPVIA 330
Query: 2169 DQFQNAAKAVEFGLGIELSNKNLTVESLGSLVSTI 2203
+ + +A G G+E+ + VES+ + + I
Sbjct: 331 EVWDSARLLHAAGAGVEVPWEQAGVESVLAACARI 365
Score = 63.2 bits (154), Expect = 4e-10
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN-- 1889
P C + + HGG + + + GVP V +P + + +A G G+E+ V
Sbjct: 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQAGVESV 358
Query: 1890 ----REIISEPHF 1898
I + +
Sbjct: 359 LAACARIRDDSSY 371
Score = 55.1 bits (133), Expect = 2e-07
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P C + + HGG + L + G+P +++P A+ + +A L G G
Sbjct: 299 PACDVVVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAG 345
Score = 32.8 bits (75), Expect = 1.5
Identities = 12/80 (15%), Positives = 29/80 (36%), Gaps = 8/80 (10%)
Query: 612 ILDDAHEGFIWFSLGSVMEPKTIDPV-----LLADLFRAFSKYKYKVVW---KWSGQDLG 663
+ ++ + + + G+ + + + LL L + K ++VV Q L
Sbjct: 221 VFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ 280
Query: 664 NVPRNVILKPWAPQIPVLGH 683
+P V+ P ++
Sbjct: 281 PLPEGVLAAGQFPLSAIMPA 300
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis;
1.88A {Streptomyces fradiae}
Length = 384
Score = 99.1 bits (247), Expect = 9e-22
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 8/145 (5%)
Query: 311 ATRGVIYVSFGSLIRPSRMSDSMRTL--LVTAFSRTGLTVL---WRYEGDSIENLPGNVH 365
TR + V+ GS + + L L R + ++ +++
Sbjct: 208 DTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQAR 267
Query: 366 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAG 425
+ W P V C L + H G S L + G+P + +P + R + D GA
Sbjct: 268 VG-WTPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAA 324
Query: 426 VELSYFNITLESIAWATSIVLSNPR 450
+ L + E+IA + + +
Sbjct: 325 IALLPGEDSTEAIADSCQELQAKDT 349
Score = 91.4 bits (227), Expect = 3e-19
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 12/156 (7%)
Query: 1079 FSLGSV--MEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQD---LGNVPRNVILKPWAPQ 1133
+ GS E + L L + ++ +++ L + W P
Sbjct: 215 VTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPL 273
Query: 1134 IPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTN 1193
V C L + H G S L + G+P + IP + A +G + L
Sbjct: 274 DVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGE 331
Query: 1194 LSEASLDWAISTVTTDSRYKEQAMARSRILKDRLRS 1229
S ++ + + Y +A + L +
Sbjct: 332 DSTEAIADSCQELQAKDTYARRA----QDLSREISG 363
Score = 87.2 bits (216), Expect = 7e-18
Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 7/140 (5%)
Query: 1457 ILFSLGSVITPKTIP--PELLNNLLQVFTKLSHLTILWKWSGQP--LSGLPRNVVQQKWV 1512
+L + GS + ++ + L L + + I+ L W
Sbjct: 213 VLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARVG-WT 271
Query: 1513 PQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKI 1572
P V C L + H G S L ++ GVP + IP + + A + ++G + L
Sbjct: 272 PLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLP 329
Query: 1573 TNLTSEALEWAITTVIGDPR 1592
++EA+ + +
Sbjct: 330 GEDSTEAIADSCQELQAKDT 349
Score = 78.7 bits (194), Expect = 5e-15
Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Query: 2072 ILYSLGSIMKSETAPDT--LARTLVETFSKFENYKIIWIWNGQQ--VTELPSHVVQIKQW 2127
+L + GS + E+ R L + +++ I+ + + W
Sbjct: 213 VLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQAR--VGW 270
Query: 2128 VPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELS 2187
P + C L + H G S + + GVP ++IP A + ++G I L
Sbjct: 271 TPLDVVAPT--CDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALL 328
Query: 2188 NKNLTVESLGSLVSTI 2203
+ E++ +
Sbjct: 329 PGEDSTEAIADSCQEL 344
Score = 63.7 bits (155), Expect = 3e-10
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN-- 1889
P C L + H G S + + GVP ++IP A + ++G I L+P
Sbjct: 278 PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIALLPGEDSTEAI 337
Query: 1890 ----REIISEPHF 1898
+E+ ++ +
Sbjct: 338 ADSCQELQAKDTY 350
Score = 55.6 bits (134), Expect = 9e-08
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
P C L + H G S L + G+P + IP + A +G
Sbjct: 278 PTCDLLVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAA 324
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold,
glycopeptide, VACO antibiotic, transferase-antibiotic
complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A
{Amycolatopsis orientalis} SCOP: c.87.1.5
Length = 416
Score = 98.0 bits (244), Expect = 3e-21
Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 24/270 (8%)
Query: 185 YGTPHTVSTYMGTPNLYSYMPDYKFAFPARMNFLQRLQNTILGVYTQLVGDWWYYPKLDG 244
G P + L S + +L Y P L+
Sbjct: 117 LGLPF-FYSVPSPVYLAS---PHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNR 172
Query: 245 IMRDFANHSAELPHLTTL--LRNVSTTFVYSDVMLEYPRPQTSNLIHVGGIHL-RNKKLP 301
+ LP + + + + +D +L P + + G L + LP
Sbjct: 173 RRAEIG-----LPPVEDVFGYGHGERPLLAADPVL-APLQPDVDAVQTGAWLLSDERPLP 226
Query: 302 KDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVL----WRYEGDSI 357
+L+ + + +++ FGS + V A G V+ W +
Sbjct: 227 PELEAFLAAG-SPPVHIGFGSSSGRGI--ADAAKVAVEAIRAQGRRVILSRGWT--ELVL 281
Query: 358 ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVR 417
+ + + Q + I HG + A G+P + +P DQ
Sbjct: 282 PDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAG 339
Query: 418 HIVDLGAGVELSYFNITLESIAWATSIVLS 447
+ LG GV T ES++ A + VL+
Sbjct: 340 RVAALGIGVAHDGPTPTFESLSAALTTVLA 369
Score = 97.2 bits (242), Expect = 5e-21
Identities = 42/210 (20%), Positives = 68/210 (32%), Gaps = 13/210 (6%)
Query: 1013 GIPPLESLF--RNVSFAFLYSNAALNYPFPNTPNIEHVGGIHIERYKNTTLPEDLKQILD 1070
G+PP+E +F + L ++ L P + G + LP +L+ L
Sbjct: 178 GLPPVEDVFGYGHGERPLLAADPVL-APLQPDVDAVQTGAWLLSD--ERPLPPELEAFLA 234
Query: 1071 DAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVV--WKWSGQDLGNVPRNVILK 1128
A + GS D A +V+ W+ L + +
Sbjct: 235 -AGSPPVHIGFGSSSGRGIAD--AAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAI 291
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVT 1188
+ I HG ++ A G+P + IP DQ A G GV
Sbjct: 292 DEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVA 349
Query: 1189 LRNTNLSEASLDWAISTVTTDSRYKEQAMA 1218
+ SL A++TV + +A A
Sbjct: 350 HDGPTPTFESLSAALTTVLAPE-TRARAEA 378
Score = 95.7 bits (238), Expect = 2e-20
Identities = 42/226 (18%), Positives = 67/226 (29%), Gaps = 10/226 (4%)
Query: 1367 YTMIRYVSRQVRNWFLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMV 1426
+ L+R + P V + L A+P L P +
Sbjct: 155 WEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERP-LLAADPVLAPLQPDVDAVQ 213
Query: 1427 QLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLS 1486
A + L +L+ L A + + GS + + ++
Sbjct: 214 TGA---WLLSDERPLPPELEAFLAAGS-PPVHIGFGS--SSGRGIADAAKVAVEAIRAQG 267
Query: 1487 HLTIL-WKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPV 1545
IL W+ L + V + I HG ++ GVP
Sbjct: 268 RRVILSRGWTELVLPDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQ 325
Query: 1546 VTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDP 1591
+ IP DQ A + G GV T E+L A+TTV+
Sbjct: 326 LVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPE 371
Score = 86.8 bits (215), Expect = 1e-17
Identities = 62/372 (16%), Positives = 110/372 (29%), Gaps = 42/372 (11%)
Query: 1837 FITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNREIISEP 1896
+ ++ V GVP V P Q + + P + + E
Sbjct: 33 MCAPPAAEERLAEV--GVPHV--PVGLPQHMMLQEGMPPPP-----PEEEQRLAAMTVEM 83
Query: 1897 HFNNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIV 1956
F+ + + G +V L + LG+P P+ V
Sbjct: 84 QFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPF--------------FYSVPSPV 129
Query: 1957 SHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAAQFGANV-LPSVESL 2015
D + + R + + + A + LP VE +
Sbjct: 130 YLASPHLPPAYDEPTTPGVTDIRV----LWEERAARFADRYGPTLNRRRAEIGLPPVEDV 185
Query: 2016 --LRNISLSFVCTDVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQKTLDSASQGFIL 2073
+ + D L P + V G + L P +++ L + S +
Sbjct: 186 FGYGHGERPLLAADPVL-APLQPDVDAVQTGAWLLSDERPL--PPELEAFLAAGS-PPVH 241
Query: 2074 YSLGSIMKSETAPDTLARTLVETFSKFENYKIIWI--WNGQQVTELPSHVVQIKQWVPQI 2131
GS A+ VE + ++I W + + I V
Sbjct: 242 IGFGSSSG--RGIADAAKVAVEAIRA-QGRRVILSRGWTELVLPDDRDDCFAI-DEVNFQ 297
Query: 2132 PILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELSNKNL 2191
+ I HG ++ A GVP ++IP DQ A + G+G+
Sbjct: 298 ALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355
Query: 2192 TVESLGSLVSTI 2203
T ESL + ++T+
Sbjct: 356 TFESLSAALTTV 367
Score = 56.4 bits (136), Expect = 6e-08
Identities = 14/59 (23%), Positives = 22/59 (37%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVNR 1890
I HG ++ A GVP ++IP DQ A + G+G+ +
Sbjct: 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFES 359
Score = 49.1 bits (117), Expect = 1e-05
Identities = 13/47 (27%), Positives = 17/47 (36%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
I HG ++ A G+P + IP DQ A G G
Sbjct: 301 RRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIG 347
Score = 34.8 bits (80), Expect = 0.34
Identities = 13/91 (14%), Positives = 23/91 (25%), Gaps = 5/91 (5%)
Query: 595 GWTFCNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVV 654
G + R P +L+ L A + GS D A +V+
Sbjct: 215 GAWLLSDERPLPPELEAFLA-AGSPPVHIGFGSSSGRGIAD--AAKVAVEAIRAQGRRVI 271
Query: 655 --WKWSGQDLGNVPRNVILKPWAPQIPVLGH 683
W+ L + + +
Sbjct: 272 LSRGWTELVLPDDRDDCFAIDEVNFQALFRR 302
Score = 32.9 bits (75), Expect = 1.4
Identities = 9/87 (10%), Positives = 19/87 (21%), Gaps = 10/87 (11%)
Query: 1671 FGFGDLKKTLDAATNGF-------ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTIL- 1722
++ L F + GS + + ++ IL
Sbjct: 216 AWLLSDERPLPPELEAFLAAGSPPVHIGFGS--SSGRGIADAAKVAVEAIRAQGRRVILS 273
Query: 1723 WKWSGQPLSGLPRNVVQQKWVPQVPVL 1749
W+ L + V +
Sbjct: 274 RGWTELVLPDDRDDCFAIDEVNFQALF 300
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU
initiative, center for eukaryotic structural genomics,
CESG fold; HET: TYD C0T; 1.60A {Micromonospora
echinospora} PDB: 3d0q_A* 3d0r_A*
Length = 398
Score = 93.4 bits (232), Expect = 7e-20
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 6/123 (4%)
Query: 307 LMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLW---RYEGDSIENLPGN 363
L R + ++ G++ + ++ + + A + + + LP N
Sbjct: 226 LPPVPARPEVAITMGTIELQAFGIGAVEPI-IAAAGEVDADFVLALGDLDISPLGTLPRN 284
Query: 364 VHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLG 423
V W P +L C + HGG + + AI GIP + P DQ H
Sbjct: 285 VRAVGWTPLHTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR 342
Query: 424 AGV 426
G+
Sbjct: 343 RGI 345
Score = 87.2 bits (216), Expect = 8e-18
Identities = 30/141 (21%), Positives = 54/141 (38%), Gaps = 8/141 (5%)
Query: 1079 FSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQD---LGNVPRNVILKPWAPQIP 1135
++G+ +E + + + A + V D LG +PRNV W P
Sbjct: 237 ITMGT-IELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHT 295
Query: 1136 VLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTLRNTNLS 1195
+L C + HGG + + A+ GIP + P DQ+++ G+ L +
Sbjct: 296 LLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLV-STSD 352
Query: 1196 EASLDWAISTVTTDSRYKEQA 1216
+ D + + D + A
Sbjct: 353 KVDAD-LLRRLIGDESLRTAA 372
Score = 82.6 bits (204), Expect = 3e-16
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 7/138 (5%)
Query: 1457 ILFSLGSVITPKTIPPELLNNLLQVFTKLSHLTILW--KWSGQPLSGLPRNVVQQKWVPQ 1514
+ ++G++ + + ++ ++ +L PL LPRNV W P
Sbjct: 235 VAITMGTI-ELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPL 293
Query: 1515 VPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITN 1574
+L C + HGG + + + G+P + P DQF + + G+ L T
Sbjct: 294 HTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVST- 350
Query: 1575 LTSEALEWAITTVIGDPR 1592
+ + + +IGD
Sbjct: 351 -SDKVDADLLRRLIGDES 367
Score = 73.7 bits (181), Expect = 2e-13
Identities = 25/134 (18%), Positives = 57/134 (42%), Gaps = 8/134 (5%)
Query: 2072 ILYSLGSIMKSETAPDTLARTLVETFSKFENYKIIWI--WNGQQVTELPSHVVQIKQWVP 2129
+ ++G+I + ++ + + ++ + + + LP +V + W P
Sbjct: 235 VAITMGTIELQAFGIGAV-EPIIAAAGEVDADFVLALGDLDISPLGTLPRNV-RAVGWTP 292
Query: 2130 QIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAA--KAVEFGLGIELS 2187
+L C + HGG + + A+ G+P ++ P DQFQ+ A G+G+ +
Sbjct: 293 LHTLLRT--CTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVST 350
Query: 2188 NKNLTVESLGSLVS 2201
+ + + L L+
Sbjct: 351 SDKVDADLLRRLIG 364
Score = 64.1 bits (156), Expect = 2e-10
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 1832 PNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN-- 1889
C + HGG + + A+ G+P ++ P DQFQ+ A+ GI L+ +S KV+
Sbjct: 298 RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDAD 357
Query: 1890 --REIISEPHF 1898
R +I +
Sbjct: 358 LLRRLIGDESL 368
Score = 53.7 bits (129), Expect = 4e-07
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 1628 PNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGFG 1674
C + HGG + + AI GIP + P DQ+++ G
Sbjct: 298 RTCTAVVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRG 344
Score = 34.0 bits (78), Expect = 0.60
Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 623 FSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQD---LGNVPRNVILKPWAPQIP 679
++G+ +E + + + A + V D LG +PRNV W P
Sbjct: 237 ITMGT-IELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHT 295
Query: 680 VLGH 683
+L
Sbjct: 296 LLRT 299
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold,
GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A
{Medicago truncatula} PDB: 3hbj_A*
Length = 454
Score = 76.9 bits (190), Expect = 2e-14
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 315 VIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLW--RYEGDSIENLPGNV-------- 364
V+Y+SFGS++ P + L + G +W R GD E LP
Sbjct: 275 VVYISFGSVVTPPP--HELTALAE-SLEECGFPFIWSFR--GDPKEKLPKGFLERTKTKG 329
Query: 365 HIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LG 423
I W PQ ++L H + +F++H G NS LE I G+P+I PF+GDQ + L
Sbjct: 330 KIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLE 389
Query: 424 AGVEL 428
GV +
Sbjct: 390 IGVGV 394
Score = 76.1 bits (188), Expect = 4e-14
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 1510 KWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA------MK-GV 1562
W PQV +L H + +F+TH G +S LE + GVP+++ PFF DQ N ++ GV
Sbjct: 333 AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGV 392
Query: 1563 EFGFGVFLKITNLTSEALEWAITTVIGDPRG 1593
GV T E+++ A+ + +G
Sbjct: 393 GVDNGVL------TKESIKKALELTMSSEKG 417
Score = 70.7 bits (174), Expect = 2e-12
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFGFGV 1187
WAPQ+ +L H + +F+TH G NS LE + G+P+I+ P+F DQ N L GV
Sbjct: 333 AWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGV 392
Query: 1188 TLRN 1191
+ N
Sbjct: 393 GVDN 396
Score = 60.3 bits (147), Expect = 4e-09
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 2127 WVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIE 2185
W PQ+ IL H + +F+TH G S +E + GVPM+ P+F DQ N +G+
Sbjct: 334 WAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVG 393
Query: 2186 LSNKNLT 2192
+ N LT
Sbjct: 394 VDNGVLT 400
Score = 51.4 bits (124), Expect = 3e-06
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAE 1669
F+TH G NS LE I G+P+I+ P+F DQ N +L E
Sbjct: 349 FLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTE 385
Score = 45.7 bits (109), Expect = 1e-04
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIEL 1881
+IL H + +F+TH G S +E + GVPM+ P+F DQ N +G+ +
Sbjct: 339 EIL-KHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGV 394
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis,
glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP:
c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Length = 456
Score = 76.1 bits (188), Expect = 4e-14
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 21/168 (12%)
Query: 277 LEYPRPQTSNLIHVGGIHLRNKK-LPKDLQDLM---DS-ATRGVIYVSFGSLIRPSRMSD 331
+ + +++G +L + + + V+Y+SFG++ +
Sbjct: 230 TNDLKSKLKTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTV---TTPPP 286
Query: 332 SMRTLLVTAFSRTGLTVLW--RYEGDSIENLPGNV--------HIRKWIPQQDVLAHPNC 381
+ L A + + +W R + +LP + W PQ +VLAH
Sbjct: 287 AEVVALSEALEASRVPFIWSLR--DKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAV 344
Query: 382 RLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LGAGVEL 428
F++H G NS E++ G+P+I PF+GDQ + R + D L GV +
Sbjct: 345 GAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392
Score = 75.7 bits (187), Expect = 6e-14
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 1510 KWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA-MKGVEFGFGV 1568
W PQ VLAH F+TH G +S E+V GVP++ PFF DQ N M GV
Sbjct: 331 PWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 390
Query: 1569 FLKITNLTSEALEWAITTVIGDPRG 1593
++ T L ++ +G
Sbjct: 391 RIEGGVFTKSGLMSCFDQILSQEKG 415
Score = 72.7 bits (179), Expect = 6e-13
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFGFGV 1187
PWAPQ VLAH F+TH G NS E+V G+P+I P+F DQ N ++ + GV
Sbjct: 331 PWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 390
Query: 1188 TLRN 1191
+
Sbjct: 391 RIEG 394
Score = 62.3 bits (152), Expect = 1e-09
Identities = 39/179 (21%), Positives = 68/179 (37%), Gaps = 26/179 (14%)
Query: 2030 LEYPRAQSGNIVPIGGIHIERNGNLSLPEDIQ--KTLDSASQGFILY-SLGSIMKSETAP 2086
+++ + IG ++ + +P + L ++Y S G++ T P
Sbjct: 230 TNDLKSKLKTYLNIGPFNLITPPPV-VPNTTGCLQWLKERKPTSVVYISFGTV----TTP 284
Query: 2087 DT-----LARTLVETFSKFENYKIIWIWNGQQVTELPSHVVQ-------IKQWVPQIPIL 2134
L+ L + F IW + LP ++ + W PQ +L
Sbjct: 285 PPAEVVALSEALEASRVPF-----IWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVL 339
Query: 2135 AHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVE-FGLGIELSNKNLT 2192
AH F+TH G S E+V GVP++ P+F DQ N + +G+ + T
Sbjct: 340 AHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFT 398
Score = 51.9 bits (125), Expect = 2e-06
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAE 1669
F+TH G NS E++ G+P+I P+F DQ N + E
Sbjct: 347 FVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVE 383
Score = 46.5 bits (111), Expect = 8e-05
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVE-FGLGIEL 1881
++L AH F+TH G S E+V GVP++ P+F DQ N + +G+ +
Sbjct: 337 EVL-AHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation,
isoflavonoid, uridine diphosphate glycosyltransferase;
2.10A {Medicago truncatula} SCOP: c.87.1.10
Length = 482
Score = 73.9 bits (182), Expect = 3e-13
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 315 VIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLW-----RYEGDSIENLPGNVH---- 365
V+YV+FGS + M+ + + LW G S
Sbjct: 297 VVYVNFGST---TVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGS-VIFSSEFTNEIA 352
Query: 366 ----IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD 421
I W PQ VL HP+ F++H G NS E+I G+P++ PF+ DQ + R I +
Sbjct: 353 DRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICN 412
Query: 422 -LGAGVELSYFNITLESIAWA 441
G+E+ N+ E +A
Sbjct: 413 EWEIGMEIDT-NVKREELAKL 432
Score = 73.1 bits (180), Expect = 4e-13
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 1510 KWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNAMKGV-EFGFGV 1568
W PQ VL HP+ F+TH G +S E++ GVP++ PFFADQ ++ E+ G+
Sbjct: 359 SWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGM 418
Query: 1569 FLKITNLTSEALEWAITTVIGDPRG 1593
+ TN+ E L I VI +G
Sbjct: 419 EID-TNVKREELAKLINEVIAGDKG 442
Score = 69.7 bits (171), Expect = 5e-12
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFGFGV 1187
W PQ VL HP+ F+TH G NS E++ G+P++ P+FADQ + + + G+
Sbjct: 359 SWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGM 418
Score = 61.9 bits (151), Expect = 1e-09
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ +L HP+ F+TH G S E++ GVPM+ P+F DQ + E+ +
Sbjct: 357 IASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEI 416
Query: 2183 GIEL 2186
G+E+
Sbjct: 417 GMEI 420
Score = 52.3 bits (126), Expect = 1e-06
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNA-LLAERFGFGD 1675
F+TH G NS E+I G+P++ P+FADQ + + + G
Sbjct: 375 FLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGM 418
Score = 50.8 bits (122), Expect = 4e-06
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIELIPS 1884
K+L HP+ F+TH G S E++ GVPM+ P+F DQ + E+ +G+E+
Sbjct: 365 KVL-NHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI--- 420
Query: 1885 STKVNREIISE 1895
T V RE +++
Sbjct: 421 DTNVKREELAK 431
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase,
N-glucosyltransferase, UDP-glucose- dependent, plant
glycosyltransferase; HET: UDP; 1.45A {Arabidopsis
thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Length = 480
Score = 72.6 bits (179), Expect = 7e-13
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 37/144 (25%)
Query: 315 VIYVSFGSLIRPSRMSD-------------------SMRTLLVTAFSRTGLTVLWRYEGD 355
V+YVSFGS ++ +R+ A S + + D
Sbjct: 270 VLYVSFGSG---GTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDS---HSQTD 323
Query: 356 SIENLP----------GNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIG 405
+ LP G V I W PQ VLAHP+ F++H G NS LE++ GIP+I
Sbjct: 324 PLTFLPPGFLERTKKRGFV-IPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIA 382
Query: 406 VPFYGDQLSHVRHIVD-LGAGVEL 428
P Y +Q + + + + A +
Sbjct: 383 WPLYAEQKMNAVLLSEDIRAALRP 406
Score = 72.6 bits (179), Expect = 7e-13
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 1511 WVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA------MK-GVE 1563
W PQ VLAHP+ F+TH G +S LE+V G+P++ P +A+Q NA ++ +
Sbjct: 346 WAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 405
Query: 1564 FGFGVFLKITNLTSEALEWAITTVIGDPRG 1593
G + E + + ++ G
Sbjct: 406 PRAG---DDGLVRREEVARVVKGLMEGEEG 432
Score = 70.7 bits (174), Expect = 3e-12
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1126 ILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFG 1184
++ WAPQ VLAHP+ F+TH G NS LE+V GIP+I P +A+Q NA LL+E
Sbjct: 342 VIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIR 401
Query: 1185 FGV 1187
+
Sbjct: 402 AAL 404
Score = 64.6 bits (158), Expect = 2e-10
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ +LAHP+ F+TH G S +E+V G+P++ P + +Q NA +
Sbjct: 343 IPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRA 402
Query: 2183 GIEL 2186
+
Sbjct: 403 ALRP 406
Score = 51.1 bits (123), Expect = 3e-06
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNA-LLAERFGFG 1674
F+TH G NS LE++ GIP+I P +A+Q NA LL+E
Sbjct: 361 FLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAA 403
Score = 48.4 bits (116), Expect = 2e-05
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIEL-IP 1883
++L AHP+ F+TH G S +E+V G+P++ P + +Q NA + +
Sbjct: 351 QVL-AHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG 409
Query: 1884 SSTKVNREII 1893
V RE +
Sbjct: 410 DDGLVRREEV 419
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase;
HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10
PDB: 2acw_A*
Length = 463
Score = 70.7 bits (174), Expect = 2e-12
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 1511 WVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFFADQFSNA------MK-GVE 1563
W PQV VLAH F++H G +S LE++ +GVP++T P +A+Q NA G+
Sbjct: 339 WAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLG 398
Query: 1564 FGFGVFLKITNLTSEALEWAITTV 1587
+ +E +E + +
Sbjct: 399 LRVDYRKGSDVVAAEEIEKGLKDL 422
Score = 70.7 bits (174), Expect = 2e-12
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNA-LLAERFGFGV 1187
WAPQ+ VLAH F++H G NS LE++ FG+P++T P +A+Q NA L + +G G+
Sbjct: 338 GWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGL 397
Score = 67.6 bits (166), Expect = 2e-11
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 315 VIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWRYEGDSIENLP----------GNV 364
V+++ FGS+ S + +G+ LW + + P G
Sbjct: 278 VVFLCFGSMG--VSFGPSQIREIALGLKHSGVRFLWSNSAEK-KVFPEGFLEWMELEGKG 334
Query: 365 HIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD-LG 423
I W PQ +VLAH F+SH G NS LE++ +G+PI+ P Y +Q + +V G
Sbjct: 335 MICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWG 394
Query: 424 AGVEL 428
G+ L
Sbjct: 395 VGLGL 399
Score = 62.2 bits (152), Expect = 1e-09
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 2124 IKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGL 2182
I W PQ+ +LAH F++H G S +E++ FGVP++ P + +Q NA + V E+G+
Sbjct: 336 ICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGV 395
Query: 2183 GIEL 2186
G+ L
Sbjct: 396 GLGL 399
Score = 51.1 bits (123), Expect = 3e-06
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 1633 FITHGGLNSQLEAIHFGIPVITIPYFADQYRNA-LLAERFGFG 1674
F++H G NS LE++ FG+P++T P +A+Q NA L + +G G
Sbjct: 354 FVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVG 396
Score = 48.4 bits (116), Expect = 2e-05
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 1826 KILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAV-EFGLGIELIPS 1884
++L AH F++H G S +E++ FGVP++ P + +Q NA + V E+G+G+ L
Sbjct: 344 EVL-AHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVD 402
Query: 1885 STK----VNREII 1893
K V E I
Sbjct: 403 YRKGSDVVAAEEI 415
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 64.9 bits (157), Expect = 3e-10
Identities = 105/687 (15%), Positives = 201/687 (29%), Gaps = 214/687 (31%)
Query: 648 KYKYK---------VVWKWSGQDLGNVPRNVILKPWAPQIPVLGH--------FGPCLFE 690
+Y+YK V + +D+ ++P++++ K I + F L
Sbjct: 15 QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW-TLLS 73
Query: 691 DETNS---FVEMERNSHRKS----SQEYCSEELGPPASGLSYKLAALKASRRFNDRQN-S 742
+ FVE R + +E+ P Y + R +ND Q +
Sbjct: 74 KQEEMVQKFVE---EVLRINYKFLMSPIKTEQRQPSMMTRMY---IEQRDRLYNDNQVFA 127
Query: 743 PLNTAIWWVEYVLRHHGAPHLRSAFDDLSWVEFLLLD--------VLAFVTV----VLLT 790
N V R LR A +L + +L+D +A V
Sbjct: 128 KYN--------VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179
Query: 791 VFFLLF---------PILLLLVQTQGSRILAFLPLDNWSHYMQYELLFETLAARGHHITM 841
+ F +F P +L + + + H +L ++ A +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 842 YSPFPPKQN----LTNFKHVYVRNP----AFNNREYSPFEDCRQIGWFHLSAYDSLEFTL 893
P+ N L N V+N AFN C+ L
Sbjct: 240 SKPYE---NCLLVLLN-----VQNAKAWNAFNLS-------CK---------------IL 269
Query: 894 KVNREI-LADPIFQILIRSKDAFDLAMVESTF-HQQTTVLLGHYFKCPVILMGSVSVDSN 951
R + D + + L T + LL Y C +
Sbjct: 270 LTTRFKQVTD---FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP---------QD 317
Query: 952 ILESM--GSPNVLSIMPEQLRPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVASF 1009
+ + +P LSI+ E +R N W + ++ I+++ +
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLA------TWDN----WKHVNCDKLT-TIIESSLNV- 365
Query: 1010 VGPGIPPLESLFRNVSFAFLYSNAALNYPFPNTPNIEHVGGIHIERYKNTTLPEDLKQIL 1069
+ P E +R ++ ++ FP + +P L ++
Sbjct: 366 ----LEPAE--YRK-----MFDRLSV---FP----------------PSAHIPTILLSLI 395
Query: 1070 DDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGNVP-RNVILK 1128
WF + D +++ + KY +V K + ++P + LK
Sbjct: 396 --------WF------DVIKSDVMVVVNKLH-----KYSLVEKQPKESTISIPSIYLELK 436
Query: 1129 PWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQY---------RNALL 1179
L H + + H + ++ P + DQY +N
Sbjct: 437 VKLENEYAL-H---RSIVDHYNIPKTFDSDDLIPPYL------DQYFYSHIGHHLKNIEH 486
Query: 1180 AER----------FGF-GVTLRNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKDRLR 1228
ER F F +R+ + + + ++T+ YK + +
Sbjct: 487 PERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVN 546
Query: 1229 SPLDTAVYWTEYVLQHEGALHLSPVSR 1255
+ LD ++ + E L S +
Sbjct: 547 AILD-------FLPKIEENLICSKYTD 566
Score = 62.2 bits (150), Expect = 2e-09
Identities = 105/741 (14%), Positives = 190/741 (25%), Gaps = 268/741 (36%)
Query: 182 LISYGTPHTVSTYMGTPNLYSYMPDYKF-AFPARMNFLQRLQNTILGVYTQLVGDWWYYP 240
L+S V ++ +YKF P + Q T + Y +
Sbjct: 71 LLSKQE-EMVQKFVEE----VLRINYKFLMSPIKTEQRQPSMMTRM--YIE------QRD 117
Query: 241 KLDGIMRDFANHSAELPHLTTLLRNVSTTFVYSDVMLEYPRPQTSNLIH-VGGI------ 293
+L + FA ++ LR L RP + LI V G
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQA----------LLELRPAKNVLIDGVLGSGKTWVA 167
Query: 294 --HLRNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMRTLLVTAFSRTGLTVLWR 351
+ K+ Q MD + +++ + P + + ++ LL + W
Sbjct: 168 LDVCLSYKV----QCKMD---FKIFWLNLKNCNSPETVLEMLQKLLYQ------IDPNWT 214
Query: 352 YEGDSIENLPGNVH-----IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 406
D N+ +H +R+ + + + NC L +
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKP---YENC-LLV--------------------- 249
Query: 407 PFYGDQLSHVRH--IVDLGAGVELSYFNI---TLESIAWATSIVLSNPRSAYDDLSWAEF 461
L +V++ + FN+ L + + + D LS
Sbjct: 250 ------LLNVQNAKAWN--------AFNLSCKIL---------LTTRFKQVTDFLS---- 282
Query: 462 LLLDVLAFVSGVVFLVLYILLRMGRMVKRLLSPSRKAIQASQSNFEQGIYTQNLLFNFGI 521
+ S + + + +
Sbjct: 283 ---------------------------------AATTTHISLDHHSMTLTPDEVK---SL 306
Query: 522 FISQEVFANRAFQDLLHSNDTYDLVILESFFGQEALAVLGHKFQAPIIAETSYGTPHNCF 581
+ + + QDL + + + IIAE
Sbjct: 307 LLK---YLDCRPQDLPRE------------------VLTTNPRRLSIIAE---------- 335
Query: 582 LFMGNPNLLPSRRGWTFCNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLAD 641
W W K + D I SL ++P
Sbjct: 336 SIRDGLAT------WDN--------W--KHVNCDKLTTIIESSL------NVLEPAEYRK 373
Query: 642 LFRAFSKYKYKVVWKWSGQDLGNVPRNVILKPWAPQIPVLGHFGPCLFEDETNSFVEMER 701
+F S + ++P ++ W I D ++ +
Sbjct: 374 MFDRLSVFPPSA----------HIPTILLSLIWFDVIK----------SDVMVVVNKLHK 413
Query: 702 NS----HRKSSQEY---CSEELGPPASGLSYKLAALKAS--RRFNDRQNSPLN--TAIWW 750
S K S EL AL S +N + + +
Sbjct: 414 YSLVEKQPKESTISIPSIYLELKVKLE----NEYALHRSIVDHYNIPKTFDSDDLIPPYL 469
Query: 751 VEYVLRHHGAPHLRSAFDDLSWVEF--LLLDVLAFVTVVLL---TVFFLLFPILLLLVQT 805
+Y H G HL++ F + LD F+ + T + IL L Q
Sbjct: 470 DQYFYSHIGH-HLKNIEHPERMTLFRMVFLD-FRFLEQKIRHDSTAWNASGSILNTLQQ- 526
Query: 806 QGSRILAFLPLDNWSHYMQ-----YELLFETLAARGHHITMYSPFPPK--QNLTNFKHVY 858
L + Y+ YE L + F PK +NL K+
Sbjct: 527 ----------LKFYKPYICDNDPKYERLVNAILD----------FLPKIEENLICSKYTD 566
Query: 859 VRNPAFNNREYSPFEDC-RQI 878
+ A + + FE+ +Q+
Sbjct: 567 LLRIALMAEDEAIFEEAHKQV 587
Score = 60.6 bits (146), Expect = 5e-09
Identities = 92/570 (16%), Positives = 170/570 (29%), Gaps = 172/570 (30%)
Query: 1475 LNNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHGGLSS 1534
L N QVF K +++ L QP L R + + P + I G L S
Sbjct: 119 LYNDNQVFAKY-NVSRL-----QPYLKL-RQALLE---------LRPAKNVLI-DGVLGS 161
Query: 1535 QLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVF-LKITNLTSEA--LE--WAITTVIG 1589
G V D + + F +F L + N S LE + I
Sbjct: 162 -------GKTWVA----LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQI- 209
Query: 1590 DPRGHHITMYSPFPPKQNLTNFKHVHVQNQAFDNIMT---HPNCKLFITHGGLNSQLEAI 1646
DP K + + + ++ + NC L + L
Sbjct: 210 DP-NWTSRSDHSSNIKLRIHSIQ------AELRRLLKSKPYENC-LLV--------L--- 250
Query: 1647 HFGIPVITIPYFADQYRNALLAERFGFGDLK-KTLDAATNGFILFSLGSVITPKTIPPEL 1705
+NA F +L K L T F + ++ T
Sbjct: 251 -------------LNVQNAKAWNAF---NLSCKIL--LTTRFK--QVTDFLSAATTTHIS 290
Query: 1706 LNNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLGGTLYKEQAMARS--- 1762
L++ T ++L K+ LPR V+ P+ + ++ +A
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN--PRRLSIIAESIRDG-LATWDNW 347
Query: 1763 -RILKDRLRSPLDTAVYWTEYVLQHGGALHLSPVS-RHLYW----FQYYLLDVL--AFIL 1814
+ D+L + +++++ L P R ++ F +L
Sbjct: 348 KHVNCDKLTTIIESSL------------NVLEPAEYRKMFDRLSVFPP---SAHIPTILL 392
Query: 1815 AVL-----------MVAYLLIRKILKAHPNCKLFITHGG---LKSQIE---AVHFGVPMV 1857
+++ +V L +++ P LK ++E A+H +
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH---RSI 449
Query: 1858 I----IPYFYDQFQNAAKAVEFG-----LGIELIPSSTKVNREIISEPHFNNLIRSGRGS 1908
+ IP +D + +G H N+ R +
Sbjct: 450 VDHYNIPKTFDSD-DLIPPYLDQYFYSHIGH-----------------HLKNIEHPERMT 491
Query: 1909 FDIVLAEPLFGQEATVYLG-HALGVPLINLG-ASAAHADILDVMG-----SPNIVSHMPE 1961
LF V+L L + + A A IL+ + P I + P+
Sbjct: 492 --------LF---RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPK 540
Query: 1962 FYSSLTDRMNFIER-AINFIYAIHRYYLRL 1990
+ + ++F+ + N I + + LR+
Sbjct: 541 YERLVNAILDFLPKIEENLICSKYTDLLRI 570
Score = 59.9 bits (144), Expect = 1e-08
Identities = 95/764 (12%), Positives = 202/764 (26%), Gaps = 272/764 (35%)
Query: 761 PHLRSAF--D-DLSWVEFLLLDVL--AFVTVVL-----LTVFFLLFPILLLLVQTQGSRI 810
AF + D V+ + +L + ++ ++ LF LL ++ +
Sbjct: 23 SVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL----SKQEEM 78
Query: 811 LA-FLPLDNWSHYMQYELLFETLAARGHHITMYSPFPPKQNLTNFKHVYVRNPAFN-NRE 868
+ F+ + Y+ L + P + + R+ +N N+
Sbjct: 79 VQKFV---EEVLRINYKFLMSPIKTE--------QRQPSMMTRMY--IEQRDRLYNDNQV 125
Query: 869 YSPFEDCRQ--------------------------IG--WFHLSAYDSLEFTLKVNREIL 900
++ + R G W L S + K++
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD---- 181
Query: 901 ADPIFQILIRSKDAFD--LAMVESTFHQ---QTTVLLGHYFKCPVILMGSVSVDSNILES 955
IF + +++ ++ + L M++ +Q T H + + + +L+S
Sbjct: 182 -FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240
Query: 956 MGSPNVLSIM-----PEQLRP--LSDRMTLTERIQNVYYAWVRLIFGRIEYHI-LDNQVA 1007
N L ++ + LS ++ LT R + V + HI LD+
Sbjct: 241 KPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV----TDFLSAATTTHISLDHHSM 296
Query: 1008 SFVGPGIPPLESLFR---NVSFAFLYSNAALNYPFPNTPNIEHVGGI------HIERYKN 1058
+ ++SL + L P + I + + N
Sbjct: 297 TLTPD---EVKSLLLKYLDCRPQDLPREVLTTNPR-------RLSIIAESIRDGLATWDN 346
Query: 1059 TTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDL 1118
K + D I SL ++P +F S +
Sbjct: 347 ------WKHVNCDKLTTIIESSL------NVLEPAEYRKMFDRLSVFPPSA--------- 385
Query: 1119 GNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNAL 1178
++P ++ W F + + ++
Sbjct: 386 -HIPTILLSLIW-----------------------------FDVIKSDVMVVVNKLHKYS 415
Query: 1179 LAERFGFGVTLRNTNLSEASLDWAISTVTTDSRY--------KEQAMARSRILKDRLRSP 1230
L E+ ST++ S Y E A+ RS + +
Sbjct: 416 LVEK-----------------QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT 458
Query: 1231 LDTAVYWTEYVLQHEGALHLSPVSRHLYWFQYYLLDVLAFILVIGAILGVVVLLCSKLTI 1290
D L P Y++ +
Sbjct: 459 FD---SD-----------DLIPPYLDQYFYSH---------------------------- 476
Query: 1291 KMLSKTHNAWTNENRDEVTVVLGHIFNAPVIHLAATGPYGNILEAMGSPNIVSFMPEIYS 1350
+GH HL ++ +
Sbjct: 477 ---------------------IGH-------HLKNIEHPER----------MTLFRMV-- 496
Query: 1351 YLKSNMSLVER-IQNFHYTMIRYVSRQVRNWFLD-RMIEQNLGPGVPPLDSLLRNISMCF 1408
+L + +E+ I+ H + S + N + + + P + L+ I + F
Sbjct: 497 FL--DFRFLEQKIR--HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAI-LDF 551
Query: 1409 L--YAEPALEYPYPMAPNMVQLAGIHLQRNKTLTLSEDLKKTLD 1450
L E + Y +++++A L + + E+ K +
Sbjct: 552 LPKIEENLICSKY---TDLLRIA---LM-AEDEAIFEEAHKQVQ 588
Score = 54.9 bits (131), Expect = 3e-07
Identities = 106/671 (15%), Positives = 191/671 (28%), Gaps = 229/671 (34%)
Query: 915 FDLAMVESTFHQQTTVLLGHY---FKCPVI--LMGSVSVDSNILESMGSPNVLSIMPEQL 969
F+ + + +V + F C + + S+ I + S + +
Sbjct: 9 FETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV----SGT 64
Query: 970 RPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVAS-FVGPGIPPLE-SLFRNVSFA 1027
L TL + + + +V + RI Y L + + + P + R+
Sbjct: 65 LRLFW--TLLSKQEEMVQKFVEEVL-RINYKFLMSPIKTEQRQPSMMTRMYIEQRDR--- 118
Query: 1028 FLYSNAALNYPFP--NTPNIEHVGGIHIERYKNTTLPEDLKQILDDA-----H--EGFIW 1078
LY++ N F N ++ L + L + L A G
Sbjct: 119 -LYND---NQVFAKYNVSRLQPY----------LKLRQALLE-LRPAKNVLIDGVLGS-- 161
Query: 1079 FSLGSVMEPKTIDPVLLADLFRAFS---KYKYKVVWKWSGQDLGNVPR-NVILKPWAPQI 1134
G KT + D+ ++ K +K+ W +L N +L+ +
Sbjct: 162 ---G-----KT---WVALDVCLSYKVQCKMDFKIFW----LNLKNCNSPETVLEMLQKLL 206
Query: 1135 PVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALL----------AERFG 1184
+ + N +L +H + + Y N LL F
Sbjct: 207 YQIDPNWTSR--SDHSSNIKLR-IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN 263
Query: 1185 FG----VTLRNTNLSEA---------SLDWAISTVTTD------SRY--------KEQAM 1217
+T R +++ SLD T+T D +Y + +
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 1218 ARS----RILKDRLRSPLDTAVYWTEYV---LQH--EGAL-HLSPVS-RHLYW----FQY 1262
+ I+ + +R L T W L E +L L P R ++ F
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPP 383
Query: 1263 YLLDVLAFILVIGAILGVVVLLCSKLTIKMLSKTHNAWTNENRDEVTVVLGHIFNAPVIH 1322
+ +LS W + + +V VV+ +
Sbjct: 384 ---SA-------------------HIPTILLSLI---WFDVIKSDVMVVVNKLHKY---- 414
Query: 1323 LAATGPYGNILEAMGSPNIVSFMPEIYS-YLKSNMSLVERIQNFHYTMI-RYVSRQVRNW 1380
+++E + +S I S YL+ + L H +++ Y + +
Sbjct: 415 --------SLVEKQPKESTIS----IPSIYLELKVKLENEYA-LHRSIVDHY--NIPKTF 459
Query: 1381 FLDRMIEQNLGPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAGIHLQRNKTLT 1440
D +L P P LD Y Y G HL K +
Sbjct: 460 DSD-----DLIP--PYLDQ-----------------YFY-------SHIGHHL---KNIE 485
Query: 1441 LSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNL--LQVFTKLSHLTILWKWSGQP 1498
E LF + + L+ K+ H + W SG
Sbjct: 486 HPER-----------MTLF------------RMVFLDFRFLEQ--KIRHDSTAWNASGSI 520
Query: 1499 LSGLPRNVVQQ 1509
L N +QQ
Sbjct: 521 L-----NTLQQ 526
Score = 54.5 bits (130), Expect = 4e-07
Identities = 58/464 (12%), Positives = 119/464 (25%), Gaps = 145/464 (31%)
Query: 1320 VIH---------LAATGPYGNILEAMGSPNIVSFMP-EIY----SYLKSNMSLVERIQNF 1365
+I +A + S + M +I+ S +++E +Q
Sbjct: 154 LIDGVLGSGKTWVAL--------DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 1366 HYTM-------------IRYVSRQVRNWFLDRMIEQNLGPGVPPLDSL--LRNISMCFLY 1410
Y + I+ ++ L R+++ + L L N+
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAE-LRRLLKSKPYE-----NCLLVLLNVQ----- 254
Query: 1411 AEPALEYPYPMAPNMVQLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTI 1470
+ K L + + ++ T
Sbjct: 255 -----------NAKAWNAFNLSC---KILLTTRFK--------------QVTDFLSAATT 286
Query: 1471 PPELLNNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITHG 1530
L++ T ++L K+ LPR V+ P+ + + + +
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN--PRRLSIIAESIRDGLAT- 343
Query: 1531 GLSSQLETVTYGVPVVTIPFFADQFSNA-MKGVEFGFGVFLKITNLTSEALE--WA---- 1583
+ V I + A + + VF ++ + L W
Sbjct: 344 --WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIK 401
Query: 1584 -----ITT-------VIGDPRGHHITMYS-PFPPKQNLTNFKHVHVQNQAFDNIMTHPNC 1630
+ V P+ I++ S K L N +H
Sbjct: 402 SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH--------------- 446
Query: 1631 KLFITHGGLNSQLEAIHFGIPVITIPYFADQY---------RNALLAERFG-----FGDL 1676
+ + H + ++ P + DQY +N ER F D
Sbjct: 447 RSIVDHYNIPKTFDSDDLIPPYL------DQYFYSHIGHHLKNIEHPERMTLFRMVFLDF 500
Query: 1677 KKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTKLSHLT 1720
+ F+ + T +LN L Q+ ++
Sbjct: 501 R---------FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Score = 54.5 bits (130), Expect = 5e-07
Identities = 92/649 (14%), Positives = 192/649 (29%), Gaps = 178/649 (27%)
Query: 1334 EAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMIR--YVSRQVRNWFLDRMIEQNLG 1391
+ S + VS ++ L S E +Q F ++R Y + + + +
Sbjct: 53 HIIMSKDAVSGTLRLFWTLLSKQE--EMVQKFVEEVLRINY------KFLMSPIKTEQRQ 104
Query: 1392 PGVPP------LDSLLRNISMCFLYAEPALEYPYPMAPNMVQL--AGIHLQRNKTLTLSE 1443
P + D L + + +Y ++L A + L+ K + +
Sbjct: 105 PSMMTRMYIEQRDRLYNDN-------QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157
Query: 1444 DL---KKTLDAAT---------NGFILF--SLGSVITPKTIPPELLNNLL----QVFTKL 1485
L K + F +F +L + +P+T+ E+L LL +T
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL-EMLQKLLYQIDPNWTSR 216
Query: 1486 SHLTILWKWSGQPLSGLPRNVVQQKWVPQV-PVLAH-----------PNCKLFITHGGLS 1533
S + K + R +++ K VL + +CK+ +T +
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT----T 272
Query: 1534 SQLETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEAL-EWAITTVIGDPR 1592
+ + T D S + E + LK + + L +T +PR
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDE-VKSLLLKYLDCRPQDLPREVLT---TNPR 328
Query: 1593 GHHITMYSPFPPKQNLT--NFKHVHVQNQAFDNIMTHPNCKLFITHGGLNSQLEAIHFGI 1650
+++ + T N+KHV I+ + + + LE
Sbjct: 329 --RLSIIAESIRDGLATWDNWKHV--NCDKLTTII-----ESSL------NVLE------ 367
Query: 1651 PVITIPYFADQYRNALLAERFGFGDLKKTLDAATNGFILFSLGSVITPKTIPPELL---- 1706
P F +F + I + L+
Sbjct: 368 PAEYRKMFDR--------------------------LSVFPPSAHIPTILL--SLIWFDV 399
Query: 1707 --NNLLQVFTKLSHLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLGGTLYKEQAMARSRI 1764
++++ V KL +++ K + +P + + ++ E A+ RS +
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKVKLE-------NEYALHRSIV 450
Query: 1765 LKDRLRSPLDTAVYWTEYVLQHGGALHLSPVSRHLYWFQYYLLDVLAFILAVLMVAYLL- 1823
+ D L P Y++ + + + L
Sbjct: 451 DHYNIPKTFD---SD-----------DLIPPYLDQYFYSH--------------IGHHLK 482
Query: 1824 -IRKILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELI 1882
I + +F+ L+ +I H + Q + +
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIR--HDSTAWNASGSILNTLQQLKFYKPY-----IC 535
Query: 1883 PSSTKVNREIISEPHF-----NNLIRSGRGSFDIV-LAEPLFGQEATVY 1925
+ K R + + F NLI S D++ +A L ++ ++
Sbjct: 536 DNDPKYERLVNAILDFLPKIEENLICS--KYTDLLRIA--LMAEDEAIF 580
Score = 49.9 bits (118), Expect = 1e-05
Identities = 75/535 (14%), Positives = 156/535 (29%), Gaps = 142/535 (26%)
Query: 1765 LKDRLRSPLDTAVYWTEYVLQHGGALHLSPVSRHLYWFQYYLLDVL---------AFILA 1815
++D +S L ++++ VS L L F+
Sbjct: 38 VQDMPKSILSKEEI--DHIIMSK-----DAVSG-----TLRLFWTLLSKQEEMVQKFVEE 85
Query: 1816 VLMVAYLLIRKILKAHPNCKLFITHGGLKSQIEAVH--FGVPMVIIPYF------YDQFQ 1867
VL + Y + +K +T + IE + V Y Y + +
Sbjct: 86 VLRINYKFLMSPIKTEQRQPSMMT----RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR 141
Query: 1868 NAAKAVEFGLGIELIPSSTKVNREIISEPHFNNLIRSG-RGSFDIVLA-EPLFGQEATVY 1925
A EL P+ N++ G GS +A + V
Sbjct: 142 QALL--------ELRPAK--------------NVLIDGVLGSGKTWVALDVC--LSYKVQ 177
Query: 1926 LGHALGVPLINLGASAAHADILDVMGSPNIVSHMPEFYSSLTDRMNFIERAINFIYAIHR 1985
+ +NL + +L+++ ++ + ++S +D + I+ I+ I A R
Sbjct: 178 CKMDFKIFWLNLKNCNSPETVLEML--QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 1986 YYLRLWTY----------WEVDHMIAAQFGANVL-------------------PSVESLL 2016
L+ Y A +L S++
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHS 295
Query: 2017 RNI----SLSFVCTDVGLEY---PR-AQSGNIVPIGGI------HIERNGNL------SL 2056
+ S + + PR + N + I + N L
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 2057 PEDIQKTLDSASQGFI--LY-SLGSIMKSETAP-DTLAR-------TLVETF-SKFENYK 2104
I+ +L+ ++ L S P L+ + V +K Y
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 2105 IIWIWNGQQVTELPSHVVQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVII 2164
++ + +PS +++K + L H + + H + ++ P +
Sbjct: 416 LVEKQPKESTISIPSIYLELKVKLENEYAL-H---RSIVDHYNIPKTFDSDDLIPP-YLD 470
Query: 2165 PYFY-------DQFQNAAKAVEFG--------LGIELSNKNLTVESLGSLVSTIQ 2204
YFY ++ + F L ++ + + + GS+++T+Q
Sbjct: 471 QYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ 525
Score = 47.2 bits (111), Expect = 6e-05
Identities = 73/486 (15%), Positives = 140/486 (28%), Gaps = 125/486 (25%)
Query: 126 EVIPLAYVPVQKKIQTIFGGQAPVRMAKSKAVI-------GEIWFAQEALAVFG--HKFQ 176
+V V + + QA + + +K V+ G+ W A + + K
Sbjct: 124 QVFAKYNVSRLQPYLKL--RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 177 API--IGLISYGTPHTVSTYMGTPNLYSYM-------PDYKFAFPARMNFLQ-RLQNTIL 226
I + L + +P TV + L + D+ R++ +Q L+ +
Sbjct: 182 FKIFWLNLKNCNSPETVLEML--QKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK 239
Query: 227 GVYTQLVGDWWYYPK----LD-----GIMRDFANHSAELPHLTTLLRNVSTTFV-----Y 272
Y L F L LTT R T
Sbjct: 240 ---------SKPYENCLLVLLNVQNAKAWNAFNLSCKIL--LTT--RFKQVTDFLSAATT 286
Query: 273 SDVMLEYPRPQTSNLIHVGGIHLRNKKLPKDLQDLMDSATRG---VIYVSFGSLIR--PS 327
+ + L++ L L K L QDL + + IR +
Sbjct: 287 THISLDHHSM---TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI-IAESIRDGLA 342
Query: 328 RMSDSMRTLLVTAFSRT---GLTVLW------RYEGDSIENLPGNVHI------RKW--I 370
D+ + + + L VL ++ S+ P + HI W +
Sbjct: 343 T-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV--FPPSAHIPTILLSLIWFDV 399
Query: 371 PQQDV-----------LA--HPNCRLFISHG------GVNSALEAIH------YGIPII- 404
+ DV L P A+H Y IP
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459
Query: 405 ----GVPFYGDQ--LSHV-RHIVDLGAGVELSYFNITLESIAW------ATSIVLSNPRS 451
+P Y DQ SH+ H+ ++ ++ F + + S + S
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGS 519
Query: 452 AYDDLS----WAEFLLLDVLAFVSGVVFLVLYILLRMGRMVKRLLSPSRKAIQASQSNFE 507
+ L + ++ + + +V +L L ++ + S ++ + +
Sbjct: 520 ILNTLQQLKFYKPYICDNDPKY-ERLVNAILDFLPKIEENLIC--SKYTDLLRIALMAED 576
Query: 508 QGIYTQ 513
+ I+ +
Sbjct: 577 EAIFEE 582
Score = 44.8 bits (105), Expect = 3e-04
Identities = 57/354 (16%), Positives = 103/354 (29%), Gaps = 72/354 (20%)
Query: 16 VVNMLDFGSGAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEV 75
N + KI+ + T F +Q+ + + TH L
Sbjct: 258 AWNAFNLSC----------KIL-LTTRF--KQVT---DFLSAATTTHISLDHHSMTLTP- 300
Query: 76 DENLVLIKGGGGCLTQE--KIVASCTPKLV-IIADHTKQSKNLGDRYKKGIPIEVIPLAY 132
DE L+ C Q+ + V + P+ + IIA+ + D +K +
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKH--------VNC 352
Query: 133 VPVQKKIQTIFGGQAPVRMAKSKAVIGEIWFAQEALAVFGHKFQAPIIGL------ISYG 186
+ I++ P K F + L+VF P I L +
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKM--------F--DRLSVFPPSAHIPTILLSLIWFDVIKS 402
Query: 187 TP-------HTVSTYMGTPNLYSY-MPDYKFAFPARMNFLQRLQNTILGVYTQLVG-DWW 237
H S P + +P ++ L +I+ Y D
Sbjct: 403 DVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSD 462
Query: 238 YY--PKLDG-IMRDFANH--SAELPHLTTLLRNVSTTF-------VYSDVMLEYPRPQTS 285
P LD +H + E P TL R V F + +
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILN 522
Query: 286 NLI-------HVGGIHLRNKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDS 332
L ++ + ++L + D + +I + L+R + M++
Sbjct: 523 TLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAED 576
Score = 43.7 bits (102), Expect = 8e-04
Identities = 83/590 (14%), Positives = 148/590 (25%), Gaps = 226/590 (38%)
Query: 503 QSNFEQGIYTQNLLFNFGIFIS-QEVFANRAFQDLLHSNDTYDLVILESFFGQEALAVLG 561
+ G LF +S QE + +++L N Y F +
Sbjct: 57 SKDAVSGTL---RLF--WTLLSKQEEMVQKFVEEVLRIN--YK-------FLMSPIKT-- 100
Query: 562 HKFQAPIIAETSYGTPHNCFLFMGNPNLLPSRRGWTFCNACRIRP-WDLKQIL-DDAHEG 619
+ + P + Y + L+ N N R++P L+Q L +
Sbjct: 101 -EQRQPSMMTRMYIEQRD-RLYNDNQVFAKY-------NVSRLQPYLKLRQALLELRPAK 151
Query: 620 FI--------------------------------WFSLGSVMEPKT-----------IDP 636
+ W +L + P+T IDP
Sbjct: 152 NVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 637 VLLAD-----------------LFRAFSKYKYK----V---VWK---WSGQDLG------ 663
+ L R Y+ V V W+ +L
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271
Query: 664 --NVPRNVI--LKPWAPQIPVLGHFGPCLFEDETNS----FVEMERNSHRKSSQEYCSEE 715
+ V L L H L DE S +++ +E +
Sbjct: 272 TRF--KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ---DLPREVLT-- 324
Query: 716 LGPPASGLSYKLAALKASRRFNDR-------QNSPLNTAIWWVEYVLRHHGAPHLRSAFD 768
P + +A R L T I E L R FD
Sbjct: 325 TNPRRLSI---IAESI--RDGLATWDNWKHVNCDKLTTII---ESSLNVLEPAEYRKMFD 376
Query: 769 DLS----------------WVEFLLLDVLAFVTVVLLTVFFLLF----------PILLLL 802
LS W + + DV+ V L + L+ P + L
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVN--KLHKYSLVEKQPKESTISIPSIYLE 434
Query: 803 VQTQGS-------RILAF--------------LPLDN-WSHYMQYELLFETLAARGHHIT 840
++ + I+ LD + ++ GHH+
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI------------GHHLK 482
Query: 841 MYSPFPPKQNLTNFKHVY---------VRNPAFNNREYSPFED------------CRQIG 879
+ +T F+ V+ +R+ + + C
Sbjct: 483 NIE---HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDP 539
Query: 880 WFHLSAYDSLEFTLKVNREILADP---IFQILIRSKDAFDLAMVESTFHQ 926
+ L+F K+ ++ + +I + ++D A+ E Q
Sbjct: 540 KYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDE---AIFEEAHKQ 586
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 57.4 bits (138), Expect = 6e-08
Identities = 100/635 (15%), Positives = 188/635 (29%), Gaps = 212/635 (33%)
Query: 589 LLPSRRGWTFCNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTIDPVLLADLFRAFSK 648
L+P+ +F A +++ +IL + EGF + EP T A+L F
Sbjct: 21 LVPTA---SFFIASQLQE-QFNKILPEPTEGF-----AADDEPTTP-----AELVGKFLG 66
Query: 649 YKYKVVWKWSGQDLGNVPRNVILKPWAPQIPVLGHFGPC-LFEDETNSFV---EMERNSH 704
Y +V + + +L L F C L ++ ++ E ++
Sbjct: 67 YVSSLV-----EPSKVGQFDQVLNL------CLTEFENCYLEGNDIHALAAKLLQENDTT 115
Query: 705 RKSSQEYCSEELGPPASGLSYKLAALKASRRFNDRQNSPL-------------------N 745
++E +Y A + A R F+ + NS L N
Sbjct: 116 LVKTKELIK----------NYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGN 165
Query: 746 TAIWWVEYVLR---HHGAPHLRSAFDDLSWVEFLLLDVLAFVTVVLLTVFFLLFPILLLL 802
T ++ E LR + + L L T+ VF
Sbjct: 166 TDDYFEE--LRDLYQTYHVLVGDLIKFSA----ETLSELIRTTLDAEKVF---------- 209
Query: 803 VQTQGSRILAFLPLDNWSHYMQYELLFETLAARGHHITMYSP--FPPKQNLTNFKHVYVR 860
TQG L + W L + P P + H V
Sbjct: 210 --TQG------LNILEW--------LENPSNTPDKDYLLSIPISCPLIG-VIQLAHYVV- 251
Query: 861 NPAFNNREYSPFEDCRQIGWFHLSAYDSLEFTLKVNREILADPIFQILIRSKDAFDLAMV 920
+ +G+ L+ ++ ++ A +A
Sbjct: 252 -------------TAKLLGFTPGELRSYLKGATGHSQGLVT------------AVAIAET 286
Query: 921 ES--TFHQQTTVLLGHYF----KC----PVILMGSVSVDSNILESMGSPNVLSIMPEQLR 970
+S +F + F +C P + ++ ++ + G P S M
Sbjct: 287 DSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVP---SPM----- 338
Query: 971 PLS----DRMTLTERIQ--NVYYAWVRLIFGRIEYHI-LDNQVASFVGPGIPPLESLFR- 1022
LS + + + + N + + + I L N + V G PP +SL+
Sbjct: 339 -LSISNLTQEQVQDYVNKTNSHLPAGKQV------EISLVNGAKNLVVSG-PP-QSLYGL 389
Query: 1023 NVSFAFLYSNAALN---YPFPN-TPNIEHVGGIHIERYKNTTLPEDLKQILDDAHEGFIW 1078
N++ + + L+ PF + R+ P H
Sbjct: 390 NLTLRKAKAPSGLDQSRIPFSERKLKFSN-------RFLPVASPF---------HS---- 429
Query: 1079 FSLGSVMEPKTIDPVLLADLFR---AFSKYKYKV-VWK-WSGQDL----GNVPRNVILKP 1129
++ P + ++ DL + +F+ ++ V+ + G DL G++ ++
Sbjct: 430 ----HLLVPAS--DLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIV--- 480
Query: 1130 WAPQI---PVLAHPNCKLFITHGGLNSQLEAVHFG 1161
I PV + TH + FG
Sbjct: 481 --DCIIRLPVKWETTTQFKATH--------ILDFG 505
Score = 55.8 bits (134), Expect = 2e-07
Identities = 90/565 (15%), Positives = 168/565 (29%), Gaps = 181/565 (32%)
Query: 1769 LRSPLDTAVYWTEYVLQHGGALHLSPVSRHLYW--------FQYYL---LDVLAFILAVL 1817
R PL L HG H+ V ++ F L + A
Sbjct: 6 TR-PL---------TLSHGSLEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEPT 55
Query: 1818 MVAYLLIRKILKAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNA-------- 1869
A L+ + F+ + + S +E G ++ +F+N
Sbjct: 56 TPAELVGK-----------FLGY--VSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIH 102
Query: 1870 AKAVEFGLGIELIPSSTK------------VNREIISEPHFNNLIRS-GRGSFDIVLAEP 1916
A A + + TK R + + L R+ G G+ +V
Sbjct: 103 ALAAKLLQENDTTLVKTKELIKNYITARIMAKRP-FDKKSNSALFRAVGEGNAQLVA--- 158
Query: 1917 LF-GQ--------E-ATVY---------LGHALGVPLINLGASAAHADI-----LDVMG- 1951
+F GQ E +Y L L L + A+ L+++
Sbjct: 159 IFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW 218
Query: 1952 ------SPNI-------VSHMPEFYSSLTDRMNFIE--RAINFIYAIHRYYLRLWTYWEV 1996
+P+ +S P + +++ + + F R YL+
Sbjct: 219 LENPSNTPDKDYLLSIPIS-CP--LIGVIQLAHYVVTAKLLGFTPGELRSYLK-GATGHS 274
Query: 1997 DHMIAAQFGANVLPSVESLLRN----ISLSFVCTDVGLE----YPRA-----------QS 2037
++ A A S ES + I++ F +G+ YP ++
Sbjct: 275 QGLVTAVAIAET-DSWESFFVSVRKAITVLFF---IGVRCYEAYPNTSLPPSILEDSLEN 330
Query: 2038 GNIVP-----IGGI-------HIERNGNLSLPED--IQKTLDSASQGFI-------LYSL 2076
VP I + ++ + N LP ++ +L + ++ + LY L
Sbjct: 331 NEGVPSPMLSISNLTQEQVQDYVNKT-NSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGL 389
Query: 2077 GSIMKSETAPDTLARTLVETFSKFENYKIIWIWNGQQVTELPSH-------VVQIKQWVP 2129
++ AP L ++ + FS+ K+ + V P H I + +
Sbjct: 390 NLTLRKAKAPSGLDQSRIP-FSE---RKLKFSNRFLPVAS-PFHSHLLVPASDLINKDLV 444
Query: 2130 QIPILAHPN---CKLFITHGG-----LKSQIEAVHFGVPMVII-PYFYDQ--FQNAAKAV 2178
+ + + ++ T G L I V +I P ++ A +
Sbjct: 445 KNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERI--VDCIIRLPVKWETTTQFKATHIL 502
Query: 2179 EFGLGIELSNKNLTVESLGSLVSTI 2203
+FG G LG L
Sbjct: 503 DFGPG--------GASGLGVLTHRN 519
Score = 53.9 bits (129), Expect = 7e-07
Identities = 105/693 (15%), Positives = 194/693 (27%), Gaps = 250/693 (36%)
Query: 969 LRPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLESLFRNVS--- 1025
RPL TL+ G +E+ +L +P + F S
Sbjct: 6 TRPL----TLSH--------------GSLEHVLL-----------VPT--ASFFIASQLQ 34
Query: 1026 --FAFLYSNAALNYPFPNTP--NIE-------HVGGIHIERYKNTTLPEDLKQILDDAHE 1074
F + + + P E +V +E K + L L +
Sbjct: 35 EQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSS-LVEPSKVGQFDQVLNLCLTEFEN 93
Query: 1075 GFIWFS-----LGSVMEPKTIDPVLLADLFRAFSKYKYKVVWKWSGQDLGNVPRNVILKP 1129
++ + +++ V +L + + +++ + + + + +
Sbjct: 94 CYLEGNDIHALAAKLLQENDTTLVKTKELIKNY--ITARIM---AKRPFDKKSNSALFR- 147
Query: 1130 WAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFADQYRNALLAERFGFGVTL 1189
+ N +L GG Q G T YF + L + +
Sbjct: 148 ------AVGEGNAQLVAIFGG---Q------GN---TDDYFEE------LRDLY------ 177
Query: 1190 RNTNLSEASLDWAISTVTTDSRYKEQAMARSRILKDRLRSPLDTAVYWTEYVLQHEGALH 1249
+ I + L + +R+ LD +T+ L L
Sbjct: 178 ---QTYHVLVGDLIKFS-------------AETLSELIRTTLDAEKVFTQ-GLNILEWLE 220
Query: 1250 LSPVSRHLYWFQYYLLDVLAFILVIGAILGVVVLLCSKLTIKMLSKTHNAWTNENRDEVT 1309
+P + + YL I + ++GV+ L +T K+L T E R +
Sbjct: 221 -NPSNTPD---KDYL----LSIPISCPLIGVIQLAHYVVTAKLLGFTP----GELRSYLK 268
Query: 1310 VVLGH---IFNAPVIHLAATGP--YGNILEAM------GS------PNIVSFMPEIYSYL 1352
GH + A I + + ++ +A+ G PN S P I
Sbjct: 269 GATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNT-SLPPSILEDS 327
Query: 1353 KSN-------MSLV-----ERIQNFHYTMIRYVSRQVRNWFLDRMIEQNL--GP------ 1392
N M + E++Q + + + + +E +L G
Sbjct: 328 LENNEGVPSPMLSISNLTQEQVQ----DYVNKTNSHLPA---GKQVEISLVNGAKNLVVS 380
Query: 1393 GVPP-----LDSLLRN--------------------ISMCFL-YAEPALEY--PYPMAPN 1424
G PP L+ LR S FL A P + + P
Sbjct: 381 G-PPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASP---FHSHL-LVP- 434
Query: 1425 MVQLAGIHLQRNKTLTLSEDLKKTLDAATNGFILFSLGSVITPKTIPPELLNNLLQVFTK 1484
L L +N ++D++ + +G L L I+ + + +
Sbjct: 435 ASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD--------CIIR- 485
Query: 1485 LSHLTILWKWSGQPLSGLPRNVVQQKWVPQVPVLAHPNCKLFITH----G-GLSSQLETV 1539
L + W TH G G +S L +
Sbjct: 486 ---LPVKW-----------------------ETTTQFK----ATHILDFGPGGASGLGVL 515
Query: 1540 TY------GVPVVTIPFFADQFSNAMKGVEFGF 1566
T+ GV V+ A ++GF
Sbjct: 516 THRNKDGTGVRVIV----AGTLDINPDD-DYGF 543
Score = 53.5 bits (128), Expect = 9e-07
Identities = 75/448 (16%), Positives = 120/448 (26%), Gaps = 167/448 (37%)
Query: 136 QKKIQTIFGGQAPVRMAKSKAVIG--EIWFAQEALAVFGHKFQAPIIGLISYGTPHTVST 193
++ IFGGQ G + +F +E L + + LI +
Sbjct: 153 NAQLVAIFGGQ------------GNTDDYF-EE-LRDLYQTYHVLVGDLIKFSAETLSE- 197
Query: 194 YMGTPNLYSYMPDYKFAFPARMNFLQRLQNT-----------------ILGVYTQLVGDW 236
L D + F +N L+ L+N ++GV QL
Sbjct: 198 ------LIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGV-IQLA--- 247
Query: 237 WYY--PKLDGIMRDFANHSAELPHLTTLLRNV--------STT----FVYSDVMLEYPRP 282
Y KL G + L T + + + + FV +
Sbjct: 248 HYVVTAKLLGF--TPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITV--- 302
Query: 283 QTSNLIHVGGIHLR------NKKLPKDLQDLMDSATRGVIYVSFGSLIRPSRMSDSMRTL 336
L +G +R N LP + L DS G PS M L
Sbjct: 303 ----LFFIG---VRCYEAYPNTSLPPSI--LEDSLENN-----EGV---PSPM------L 339
Query: 337 LVTAFSRTGLTVLWRYEGDSIE--N--LPGNVHIRKWI-----PQQDVLA-HPNCRLFIS 386
++ ++ + D + N LP + I + V++ P S
Sbjct: 340 SISNLTQEQVQ-------DYVNKTNSHLPAGKQVE--ISLVNGAKNLVVSGPP-----QS 385
Query: 387 HGGVNSALEAIHYG-------IPI-------------IGVPFYGDQLSHVRHIV--DL-G 423
G+N L IP + PF+ L ++ DL
Sbjct: 386 LYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVK 445
Query: 424 AGVEL--SYFNITLESIAWATSIVLSNPRSAYDDLS-------------WAEFLLLD--- 465
V I + S+ R +S W
Sbjct: 446 NNVSFNAKDIQIPVYDTFDG-----SDLRVLSGSISERIVDCIIRLPVKWETTTQFKATH 500
Query: 466 VLAF----VSGVVFLVLYILLRMG-RMV 488
+L F SG+ L G R++
Sbjct: 501 ILDFGPGGASGLGVLTHRNKDGTGVRVI 528
Score = 51.6 bits (123), Expect = 3e-06
Identities = 107/661 (16%), Positives = 186/661 (28%), Gaps = 238/661 (36%)
Query: 1401 LRNISMCFLYAEPALEYPYPMAPNMVQLAGIHLQRNKTLTLSEDLKKTLDAATNGFI--- 1457
R +++ + +LE+ + + L E K L T GF
Sbjct: 6 TRPLTL----SHGSLEHVLLVPTASF----FIASQ-----LQEQFNKILPEPTEGFAADD 52
Query: 1458 -------LFS--LG---SVITPKTIPP--ELLNNLLQVFTK--LS----HLTILWKWSGQ 1497
L LG S++ P + ++LN L F L H + K +
Sbjct: 53 EPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIH-ALAAKLLQE 111
Query: 1498 PLSGLP------RNVVQQKWVPQVPVLAHPNCKLFITHGGLSSQLETVTYGVPVVTIPFF 1551
+ L +N + + + + P N LF V G
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKRPFDKKSNSALF----------RAVGEG----NAQLV 157
Query: 1552 ADQFSNAMKGVEFGFG---VFLKITNLTSEALEWAITTVIGDPRGHHITMYSPFPP-KQN 1607
A F G G G + + E L +Y + +
Sbjct: 158 A-IF-----G---GQGNTDDYFE------E-LR---------------DLYQTYHVLVGD 186
Query: 1608 LTNFKHVHVQNQAFDNIMTHPNCKLFITHGGLNSQ--------------LEAIHFGIPVI 1653
L F + + + T GLN L +I P+I
Sbjct: 187 LIKFSAETLSELIRT----TLDAEKVFTQ-GLNILEWLENPSNTPDKDYLLSIPISCPLI 241
Query: 1654 TIPYFADQYRNALLAERFGF--GDLKKTLDAATNGFILFSLGSVITPKTI-----PPELL 1706
+ A Y + A+ GF G+L+ L AT ++T I
Sbjct: 242 GVIQLA-HY--VVTAKLLGFTPGELRSYLKGATG-----HSQGLVTAVAIAETDSWESFF 293
Query: 1707 NNLLQVFTKLSHLTILWKWSG---Q---PLSGLPRNVVQQKWV-------PQVPVLGGTL 1753
++ + +T+L+ + G P + LP ++++ P + + L
Sbjct: 294 VSVRKA------ITVLF-FIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISN--L 344
Query: 1754 YKEQAMARSRILKDRLRSPLDTAVYWTEYVLQHGGALHLSPVSRHLYWFQYYLLDVLAFI 1813
+EQ + + K P V +L ++ +
Sbjct: 345 TQEQ--VQDYVNKTNSHLPAGKQVEI---------SLVNGA--KN-------------LV 378
Query: 1814 LA----VLMVAYLLIRKILKAHPNCKLFITHGGLKSQI----EAVHFGV---PMVIIPYF 1862
++ L L +RK KA +S+I + F P V P+
Sbjct: 379 VSGPPQSLYGLNLTLRKA-KAPSGLD--------QSRIPFSERKLKFSNRFLP-VASPFH 428
Query: 1863 YDQFQNAAKAVEFGL---GIELIPSSTKVNREIISEPHFN-----NLIRSGRGS-----F 1909
A+ + L + ++ P ++ +L R GS
Sbjct: 429 SHLLVPASDLINKDLVKNNVSFNAKDIQI-------PVYDTFDGSDL-RVLSGSISERIV 480
Query: 1910 DIVLAEPLFGQEATVYLGHALGVPLINLGASAAHADILDVMGSPNIVSHMPEFYSSLTDR 1969
D ++ P+ + T A H ILD G P S + LT R
Sbjct: 481 DCIIRLPVKWETTTQ--------------FKATH--ILD-FG-PGGASGL----GVLTHR 518
Query: 1970 M 1970
Sbjct: 519 N 519
Score = 51.2 bits (122), Expect = 5e-06
Identities = 117/729 (16%), Positives = 191/729 (26%), Gaps = 304/729 (41%)
Query: 383 LFISHGGVNSALEAIHYGIPIIGVP----FYGDQLSHVRHIVDLGAGVELSYFNITLESI 438
L +SHG ++ + + VP F QL FN L
Sbjct: 9 LTLSHG-------SLEHVLL---VPTASFFIASQLQ--------------EQFNKILPE- 43
Query: 439 AWATSIVLSNPRSAYDD--LSWAEFLLLDVLAFVSGVVFLVLYILLRMGRMVKRLLSPSR 496
T A DD + AE L+ L +VS L+ PS
Sbjct: 44 --PTE------GFAADDEPTTPAE-LVGKFLGYVS------------------SLVEPS- 75
Query: 497 KAIQASQSNFEQGIYTQNLLFNFGIFISQEVFANRAFQDLLHSNDTYDLVILESFFGQEA 556
+ G + Q L F + L ND + L +
Sbjct: 76 ----------KVGQFDQVLNLCLTEF-------ENCY---LEGNDIHALAA--KLLQEND 113
Query: 557 LAVLGHK------FQAPIIAETSYGTPHNCFLFM----------------GNPNLLPSRR 594
++ K A I+A+ + N LF GN +
Sbjct: 114 TTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTD------ 167
Query: 595 GWTFCNACRIRPWD-LKQILDDAHEGFIWFSLGSVMEPKTIDPVL--LADLFRAFSKYKY 651
++ L + L + + G +++ L L K
Sbjct: 168 ----------DYFEEL-RDLYQTYHVLV----GDLIK--FSAETLSELIRTTLDAEKVFT 210
Query: 652 KV--VWKWSGQDLGNVPRNVILK--PWA-PQIPV--LGHFGPCLFEDETNSFVEMERNSH 704
+ + +W ++ N P L P + P I V L H+ +
Sbjct: 211 QGLNILEW-LENPSNTPDKDYLLSIPISCPLIGVIQLAHY----------------VVTA 253
Query: 705 RKSSQEYCSEELGPPASGLSYKLAALKASRRFNDRQNSPLNTAIWWVEYVLRHHGAPHLR 764
+ + EL G + L + AI
Sbjct: 254 KLL--GFTPGELRSYLKGATGHSQGLVTA------------VAI---------------- 283
Query: 765 SAFDDLSWVEFLLLDVLAFVTVVLLTVFFLL-------FPILLL---LVQ-----TQG-- 807
+ D W F + A +TV F + +P L +++ +G
Sbjct: 284 AETDS--WESFFVSVRKA------ITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVP 335
Query: 808 SRILAF--LPLDNWSHYMQYE-LLFET---LAARGH-HITMY-SP--F----PPKQNLTN 853
S +L+ L + Q + + +T L A I++ PP+ L
Sbjct: 336 SPMLSISNLTQE------QVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQS-LYG 388
Query: 854 FKHVY--VRNPAFNNREYSPFEDCRQ--IGW--------FHLSAYDSLEFTLKVNREILA 901
+ P+ ++ PF + R+ FH S L
Sbjct: 389 LNLTLRKAKAPSGLDQSRIPFSE-RKLKFSNRFLPVASPFH-SHL-------------LV 433
Query: 902 DPIFQILIRSKDAFDLAMVESTFHQQTTVLLGHYFKCPV--ILMGSV--SVDSNILESMG 957
I DL +F+ + PV GS + +I E +
Sbjct: 434 PASDLINK------DLVKNNVSFN-------AKDIQIPVYDTFDGSDLRVLSGSISERI- 479
Query: 958 SPNVLSIMPEQLRPLSDRMTLTERIQNVYYAWVRLIFGRIEYHILDNQVASFVGPG-IPP 1016
V + ++ W + HILD F GPG
Sbjct: 480 ---V-------------DCIIRLPVK-----WETTTQFKAT-HILD-----F-GPGGASG 511
Query: 1017 LESLF-RNV 1024
L L RN
Sbjct: 512 LGVLTHRNK 520
Score = 48.9 bits (116), Expect = 2e-05
Identities = 120/642 (18%), Positives = 201/642 (31%), Gaps = 210/642 (32%)
Query: 881 FHLSAYDSLEFTLKVNREILADP--IFQILIRSKDAFDLAMVESTF-----HQQTTV--L 931
LS + SLE L V P F I + ++ F+ + E T + TT L
Sbjct: 9 LTLS-HGSLEHVLLV-------PTASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAEL 60
Query: 932 LGHY--FKCPVILMGSVSVDSNILES---------MGSPNV----LSIMPEQLRPLSDRM 976
+G + + ++ V +L + ++ ++ E L
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTK 120
Query: 977 TLTERIQNVYYAWVRLIFGRIEYHILDNQVASFVGPGIPPLES-LFRNVS--FAFLYSNA 1033
L I+N Y R++ R P S LFR V A L
Sbjct: 121 EL---IKN-YIT-ARIMAKR---------------PFDKKSNSALFRAVGEGNAQLV--- 157
Query: 1034 ALNYPFPNTPNIEHVGGI-HIERYKNTTLPEDLKQILDDAHEGFIWFSLGSVMEPKTIDP 1092
A+ F GG + + Y E L + L + + G +++
Sbjct: 158 AI---F---------GGQGNTDDY----FEE-L-RDLYQTYHVLV----GDLIK--FSAE 193
Query: 1093 VL--LADLFRAFSKYKYKV--VWKWSGQDLGNVPRNVILK--PWA-PQIPV--LAH--PN 1141
L L K + + +W ++ N P L P + P I V LAH
Sbjct: 194 TLSELIRTTLDAEKVFTQGLNILEW-LENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVT 252
Query: 1142 CKLF-ITHGGLNSQLEAV--HF-GIPVITIPYFADQ----YRNALLAERFGFGVTLR--- 1190
KL T G L S L+ H G+ D + + A F + +R
Sbjct: 253 AKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYE 312
Query: 1191 ---NTNLSEASLDWAISTVTTDSRYKEQAMARSRIL--KDRLRSPLDTAVYWTEYVLQHE 1245
NT+L ++ DS + + S +L + + + V T L
Sbjct: 313 AYPNTSLP--------PSILEDSLENNEGVP-SPMLSISNLTQEQVQDYVNKTNSHLPAG 363
Query: 1246 GALHLSPV--SRHLYWFQYYLLDVLAFILVIG---AILGVVVLLCSKLTIKMLSKTHNAW 1300
+ +S V +++L V++ G ++ G+ + L K S
Sbjct: 364 KQVEISLVNGAKNL---------VVS-----GPPQSLYGLNLTLRK---AKAPSG----- 401
Query: 1301 TNENR---DEVTVVLGHIF---NAPVIH---LAATGPYGNILEAMGSPNIVSFMPEIYSY 1351
+++R E + + F +P H L I + + N+ SF
Sbjct: 402 LDQSRIPFSERKLKFSNRFLPVASPF-HSHLLVPASD--LINKDLVKNNV-SFNA---KD 454
Query: 1352 LK---------SNM-----SLVERIQNFHYTMIRYVSRQVRNW----------FLDRMIE 1387
++ S++ S+ ERI + I + V W LD
Sbjct: 455 IQIPVYDTFDGSDLRVLSGSISERIVD----CI--IRLPV-KWETTTQFKATHILD---- 503
Query: 1388 QNLGPG-VPPLDSL---------LRNISMCFLYAEPALEYPY 1419
GPG L L +R I L P +Y +
Sbjct: 504 --FGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGF 543
Score = 38.1 bits (88), Expect = 0.050
Identities = 59/351 (16%), Positives = 113/351 (32%), Gaps = 116/351 (33%)
Query: 1785 QHGG-ALHL---SPVSRHLYWFQ--YYLLDVLAFILAVLMVAYLLIRKILKAHPNCKLFI 1838
Q G + L S ++ + W + + D F I I+ +P L I
Sbjct: 1627 QEQGMGMDLYKTSKAAQDV-WNRADNHFKDTYGF----------SILDIVINNPV-NLTI 1674
Query: 1839 THGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIELIPSSTKVN----REIIS 1894
GG K + ++ M+ ++ + E E+ ST + ++S
Sbjct: 1675 HFGGEKGKRIRENYS-AMI-----FETIVDGKLKTEKIFK-EINEHSTSYTFRSEKGLLS 1727
Query: 1895 EPHF------------NNLIRSGRGSFDIVLAEPLFGQEATVYLGHALGVPLINLGASAA 1942
F ++S +G + GH+LG A A+
Sbjct: 1728 ATQFTQPALTLMEKAAFEDLKS-KGLI----------PADATFAGHSLG----EYAALAS 1772
Query: 1943 HADILDVMGSPNIVSHMPEFYSSLTDRMNFIERAINFIYAIHRYYLRLWTYWEVDHMIAA 2002
AD++ + +V FY R ++ A+ D + +
Sbjct: 1773 LADVMSIESLVEVV-----FY-----RGMTMQVAV-----------------PRDELGRS 1805
Query: 2003 QFG-ANVLPS-VESLLRNISLSFVCTDVGLEYPRAQSGNIVPIGGIHIERNGNLSLPEDI 2060
+G + P V + +L +V VG ++G +V I N N+ E+
Sbjct: 1806 NYGMIAINPGRVAASFSQEALQYVVERVG-----KRTGWLVEIV------NYNV---ENQ 1851
Query: 2061 Q-------KTLDSASQGFILYSLGSIMKSETAPDTLARTLVETFSKFENYK 2104
Q + LD+ + +L + + K + L ++ S E +
Sbjct: 1852 QYVAAGDLRALDTVTN--VLNFIK-LQKIDIIE------LQKSLS-LEEVE 1892
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB:
3hbn_A*
Length = 282
Score = 40.5 bits (93), Expect = 0.004
Identities = 14/86 (16%), Positives = 22/86 (25%), Gaps = 2/86 (2%)
Query: 1111 WKWSGQDLGNVPRNVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYF 1170
Q + N+ L I L + I EA+ I Y
Sbjct: 196 NLKKLQKFAKLHNNIRLFIDHENIAKLMN-ESNKLIISASS-LVNEALLLKANFKAICYV 253
Query: 1171 ADQYRNALLAERFGFGVTLRNTNLSE 1196
+Q A + G+ V +
Sbjct: 254 KNQESTATWLAKKGYEVEYKYLEHHH 279
Score = 39.0 bits (89), Expect = 0.014
Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 2/89 (2%)
Query: 344 TGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPI 403
T + + L N+ + L + I EA+
Sbjct: 190 TSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMN-ESNKLIISASS-LVNEALLLKANF 247
Query: 404 IGVPFYGDQLSHVRHIVDLGAGVELSYFN 432
+ + +Q S + G VE Y
Sbjct: 248 KAICYVKNQESTATWLAKKGYEVEYKYLE 276
Score = 38.6 bits (88), Expect = 0.017
Identities = 16/132 (12%), Positives = 35/132 (26%), Gaps = 9/132 (6%)
Query: 1554 QFSNAMKGVEFGFGVFLKITNLTSEALEWAITTVIGDPRGHHITMYSPFPPKQNLTNFKH 1613
G + L+I + + +I T +P + ++ +
Sbjct: 158 YDFFICMGGTDIKNLSLQIASELPKTKIISIATSSSNPNLKKLQKFAK--------LHNN 209
Query: 1614 VHVQNQAFDNIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPYFADQYRNALLAERFGF 1673
+ + + I EA+ I Y +Q A + G+
Sbjct: 210 IRLFIDHENIAKLMNESNKLIISASS-LVNEALLLKANFKAICYVKNQESTATWLAKKGY 268
Query: 1674 GDLKKTLDAATN 1685
K L+ +
Sbjct: 269 EVEYKYLEHHHH 280
Score = 35.5 bits (80), Expect = 0.15
Identities = 11/69 (15%), Positives = 19/69 (27%), Gaps = 2/69 (2%)
Query: 2122 VQIKQWVPQIPILAHPNCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFG 2181
+++ I L + I EA+ I Y +Q A + G
Sbjct: 210 IRLFIDHENIAKLMN-ESNKLIISASS-LVNEALLLKANFKAICYVKNQESTATWLAKKG 267
Query: 2182 LGIELSNKN 2190
+E
Sbjct: 268 YEVEYKYLE 276
Score = 35.1 bits (79), Expect = 0.24
Identities = 9/49 (18%), Positives = 13/49 (26%), Gaps = 1/49 (2%)
Query: 1833 NCKLFITHGGLKSQIEAVHFGVPMVIIPYFYDQFQNAAKAVEFGLGIEL 1881
I EA+ I Y +Q A + G +E
Sbjct: 225 ESNKLIISASS-LVNEALLLKANFKAICYVKNQESTATWLAKKGYEVEY 272
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 38.1 bits (88), Expect = 0.013
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 9/51 (17%)
Query: 599 CNACRIRPWDLKQILDDAHEGFIWFSLGSVMEPKTID--PVLLADLFRAFS 647
C C++ P + + + + G V+ K +D +R FS
Sbjct: 24 CPECKVYPPKI--VERFSEGDVVCALCGLVLSDKLVDTRSE-----WRTFS 67
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 35.7 bits (81), Expect = 0.061
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 13/31 (41%)
Query: 1127 LKPWAPQ-IPVLAHPNCKLFITHGGLNSQLE 1156
LK +A P LA + + +E
Sbjct: 29 LKLYADDSAPALA------------IKATME 47
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like
fold, endoplasmic reticulum, glycosyltransferase,
structural genomics; NMR {Saccharomyces cerevisiae} PDB:
2ks6_A
Length = 224
Score = 34.8 bits (79), Expect = 0.21
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 1124 NVILKPWAPQIPVLAHPNCKLFITHGGLNSQLEAVHFGIPVITIPYFA----DQYRNALL 1179
VI ++ ++ + L I+H G S L+++ P+I + Q + A
Sbjct: 115 KVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174
Query: 1180 AERFGFGVTLRNTNLSEASLDWAISTVTTDS 1210
G+ + T E L + T+
Sbjct: 175 FVELGYVWSCAPT---ETGLIAGLRASQTEK 202
Score = 34.4 bits (78), Expect = 0.26
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 10/120 (8%)
Query: 2087 DTLARTLVETFSKFENYKIIWIWNGQQVTELPSHV------VQIKQWVPQIPILAHPNCK 2140
+ E + E+ KI G T + V + ++ +
Sbjct: 75 SEFEHLVQERGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSD 134
Query: 2141 LFITHGGLKSQIEAVHFGVPMVIIPYFY----DQFQNAAKAVEFGLGIELSNKNLTVESL 2196
L I+H G S ++++ P+++ Q Q A K VE G + + +
Sbjct: 135 LVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLIAG 194
Score = 34.4 bits (78), Expect = 0.28
Identities = 14/96 (14%), Positives = 27/96 (28%), Gaps = 2/96 (2%)
Query: 1562 VEFGFGVFLKITNLTSEALEWAITTVIGDPRGHHITMYSPFPPKQNLTNFKHVHVQNQAF 1621
++FG + +L E + I + + +
Sbjct: 67 IQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQ 126
Query: 1622 DNIMTHPNCKLFITHGGLNSQLEAIHFGIPVITIPY 1657
I L I+H G S L+++ P+I
Sbjct: 127 SIIRD--YSDLVISHAGTGSILDSLRLNKPLIVCVN 160
Score = 34.0 bits (77), Expect = 0.41
Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Query: 363 NVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY----GDQLSHVRH 418
V + + + L ISH G S L+++ P+I Q
Sbjct: 115 KVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174
Query: 419 IVDLGAGVELSYFNITLESI 438
V+LG + L +
Sbjct: 175 FVELGYVWSCAPTETGLIAG 194
Score = 32.1 bits (72), Expect = 1.8
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 6/91 (6%)
Query: 1834 CKLFITHGGLKSQIEAVHFGVPMVIIPYFY----DQFQNAAKAVEFGLGIELIPSSTKVN 1889
L I+H G S ++++ P+++ Q Q A K VE G P+ T +
Sbjct: 133 SDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLI 192
Query: 1890 REI--ISEPHFNNLIRSGRGSFDIVLAEPLF 1918
+ S SF+ +L E ++
Sbjct: 193 AGLRASQTEKLKPFPVSHNPSFERLLVETIY 223
Score = 30.5 bits (68), Expect = 4.6
Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 14/89 (15%)
Query: 1523 CKLFITHGGLSSQLETVTYGVPVVTIPFFA----DQFSNAMKGVEFGFGVFLKITNLTSE 1578
L I+H G S L+++ P++ + Q A K VE G ++ T
Sbjct: 133 SDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELG---YVWSCAPTET 189
Query: 1579 ALEWAITTVIGDPRGHHITMYSPFPPKQN 1607
L + + PFP N
Sbjct: 190 GLIAGLRASQTEK-------LKPFPVSHN 211
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II,
ligase; 3.23A {Methanococcus maripaludis}
Length = 701
Score = 33.8 bits (77), Expect = 0.74
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 23/102 (22%)
Query: 1331 NILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMIRYVSRQVRNWFLDRMIEQNL 1390
L G + + + VER+ MI VR + E L
Sbjct: 323 VALSKYG------IDVPVMNL---GLG-VERL-----AMISGNFADVREMVYPQFYEHKL 367
Query: 1391 GPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAGIH 1432
+ SM L P ++ Y + +++ +
Sbjct: 368 --------NDRNVASMVKLDKVPVMDEIYDLTKELIESCVKN 401
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide)
pyrophosphoryl-undecaprenol...; rossmann fold,
transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB:
1nlm_A*
Length = 364
Score = 32.8 bits (76), Expect = 1.2
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 1161 GIPVITIPY-FAD--QYRNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAM 1217
G+P + +P+ D QY NAL E+ G + LS ++ ++ + ++ M
Sbjct: 274 GLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETL---LTM 330
Query: 1218 AR 1219
A
Sbjct: 331 AE 332
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II,
ligase; 3.23A {Methanococcus maripaludis}
Length = 685
Score = 33.0 bits (75), Expect = 1.3
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 23/102 (22%)
Query: 1331 NILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMIRYVSRQVRNWFLDRMIEQNL 1390
L G + + + VER+ MI VR + E L
Sbjct: 323 VALSKYGID------VPVMNL---GLG-VERL-----AMISGNFADVREMVYPQFYEHKL 367
Query: 1391 GPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAGIH 1432
+ SM L P ++ Y + +++ +
Sbjct: 368 --------NDRNVASMVKLDKVPVMDEIYDLTKELIESCVKN 401
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A
{Actinobacillus pleuropneumoniae serovaorganism_taxid}
PDB: 3q3h_A* 3q3i_A
Length = 631
Score = 32.6 bits (74), Expect = 1.9
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 29/128 (22%)
Query: 1119 GNVPRNVILKPWAPQIPVLA-HPNCKLFI---THGGLNSQLEAVHFGIPVITIPYFADQY 1174
+ + P +P L NC + + G N ++ V G+ +
Sbjct: 495 SYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNGIIDMVTLGLVGVCKT------ 548
Query: 1175 RNALLAERFGFGVTLRNTNLSEASLDWAISTVTTDSRYKEQAMA-----------RSRIL 1223
A + E G+ + L E W I T Y E+A+ R I+
Sbjct: 549 -GAEVHEHIDEGL-FKRLGLPE----WLI--ANTVDEYVERAVRLAENHQERLELRRYII 600
Query: 1224 KDRLRSPL 1231
++ + L
Sbjct: 601 ENNGLNTL 608
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II,
ligase; 3.23A {Methanococcus maripaludis}
Length = 665
Score = 32.6 bits (74), Expect = 2.0
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 23/102 (22%)
Query: 1331 NILEAMGSPNIVSFMPEIYSYLKSNMSLVERIQNFHYTMIRYVSRQVRNWFLDRMIEQNL 1390
L G + + + VER+ MI VR + E L
Sbjct: 323 VALSKYG------IDVPVMNL---GLG-VERL-----AMISGNFADVREMVYPQFYEHKL 367
Query: 1391 GPGVPPLDSLLRNISMCFLYAEPALEYPYPMAPNMVQLAGIH 1432
+ SM L P ++ Y + +++ +
Sbjct: 368 --------NDRNVASMVKLDKVPVMDEIYDLTKELIESCVKN 401
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics,
structure initiative, PSI, structural genomics, unknown
FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Length = 126
Score = 30.2 bits (68), Expect = 2.6
Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 6/60 (10%)
Query: 1537 ETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEAL-----EWAITTVIGDP 1591
+ + + + ++ SN F F + I NL+S+ + W IT G
Sbjct: 2 DVSLPCIKIQVQTRYIEEQSNPEYQR-FVFAYLITIKNLSSQTVQLMSRRWLITDADGKQ 60
>2qwu_A Intracellular growth locus, subunit C; structure, IGLC, cell
invasion; 1.65A {Francisella tularensis subsp}
Length = 211
Score = 30.9 bits (69), Expect = 3.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 1605 KQNLTNFKHVHVQNQAFDNIMTHPNCKLFI 1634
+Q +T+ + +HV+ I +HPNC++FI
Sbjct: 9 RQQVTSGETIHVRTDPTACIGSHPNCRMFI 38
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase;
1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A*
3s4t_A*
Length = 327
Score = 30.9 bits (70), Expect = 4.7
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 1/53 (1%)
Query: 1791 HLSPVSRHLYWFQYYLLDVLAFILAV-LMVAYLLIRKILKAHPNCKLFITHGG 1842
L SR + L AF + L+ + HP + + H G
Sbjct: 168 PLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMG 220
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri,
structural genomics, unknown function; NMR {Xanthomonas
axonopodis PV}
Length = 127
Score = 29.5 bits (66), Expect = 5.1
Identities = 14/60 (23%), Positives = 20/60 (33%), Gaps = 6/60 (10%)
Query: 1537 ETVTYGVPVVTIPFFADQFSNAMKGVEFGFGVFLKITNLTSEAL-----EWAITTVIGDP 1591
+ Y V V P F S +G + F ++I N + W IT G
Sbjct: 3 DDPRYRVEVEVSPRFLAHQSTPDEGR-YAFAYSIRIQNAGAVPARLVARHWQITDGNGRT 61
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural
genomics, protein structure initiative; 2.40A
{Methanosarcina mazei GO1}
Length = 478
Score = 30.7 bits (70), Expect = 7.0
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 12/61 (19%)
Query: 19 MLDFGSGAERIKAEKLKIVCVPTSFQARQLILKNNMVLGDLETHPDLSCVIDGADEVDEN 78
+ RI + + T F + + PD S +IDG V +
Sbjct: 89 KFECTPDFSRISELDAVTLAIQTPFANPK------------DLEPDFSALIDGIRNVGKY 136
Query: 79 L 79
L
Sbjct: 137 L 137
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A
{Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Length = 300
Score = 30.2 bits (69), Expect = 7.2
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 7/41 (17%)
Query: 2105 IIWIWNG-----QQVTELPSHVVQIKQWVPQIPILAHPNCK 2140
I G Q+ T V + K+ P ++ HP C
Sbjct: 162 IPVPSKGHCYVHQKFT--LDDVERAKKLHPNAKLMIHPECI 200
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.139 0.428
Gapped
Lambda K H
0.267 0.0677 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 34,946,852
Number of extensions: 2215460
Number of successful extensions: 5565
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5394
Number of HSP's successfully gapped: 218
Length of query: 2211
Length of database: 6,701,793
Length adjustment: 109
Effective length of query: 2102
Effective length of database: 3,658,404
Effective search space: 7689965208
Effective search space used: 7689965208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (28.9 bits)