Query psy10186
Match_columns 124
No_of_seqs 112 out of 1270
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 20:04:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o6l_A UDP-glucuronosyltransfe 100.0 4.6E-28 1.6E-32 157.0 13.2 122 2-123 36-157 (170)
2 2c1x_A UDP-glucose flavonoid 3 99.9 1E-27 3.5E-32 176.5 10.9 120 2-121 285-413 (456)
3 3hbf_A Flavonoid 3-O-glucosylt 99.9 8.9E-28 3.1E-32 176.7 9.5 120 2-121 287-415 (454)
4 2vch_A Hydroquinone glucosyltr 99.9 3E-27 1E-31 175.0 11.5 118 2-119 282-428 (480)
5 2acv_A Triterpene UDP-glucosyl 99.9 1E-26 3.5E-31 171.4 13.0 123 2-124 291-430 (463)
6 2pq6_A UDP-glucuronosyl/UDP-gl 99.9 8.9E-27 3E-31 172.4 11.2 119 2-121 309-440 (482)
7 1rrv_A Glycosyltransferase GTF 99.9 5.6E-25 1.9E-29 159.5 12.3 118 3-123 253-372 (416)
8 4amg_A Snogd; transferase, pol 99.9 4E-25 1.4E-29 158.7 9.9 115 4-124 255-372 (400)
9 3h4t_A Glycosyltransferase GTF 99.9 1.6E-24 5.4E-29 156.9 12.1 119 2-123 234-354 (404)
10 1iir_A Glycosyltransferase GTF 99.9 1.2E-24 4.2E-29 157.7 11.2 119 2-123 251-371 (415)
11 2iya_A OLEI, oleandomycin glyc 99.9 2.5E-24 8.5E-29 156.2 12.0 120 2-123 269-392 (424)
12 2yjn_A ERYCIII, glycosyltransf 99.9 2.3E-24 8E-29 157.3 7.8 118 4-123 286-406 (441)
13 3rsc_A CALG2; TDP, enediyne, s 99.9 2.9E-23 9.8E-28 149.9 10.7 119 3-123 262-384 (415)
14 2p6p_A Glycosyl transferase; X 99.9 4.6E-24 1.6E-28 152.9 6.2 117 4-123 231-350 (384)
15 4fzr_A SSFS6; structural genom 99.9 1.2E-23 4.2E-28 151.4 8.3 119 4-124 251-372 (398)
16 3ia7_A CALG4; glycosysltransfe 99.9 1.4E-22 4.9E-27 145.3 11.6 119 3-123 246-369 (402)
17 3tsa_A SPNG, NDP-rhamnosyltran 99.9 2.3E-22 7.9E-27 144.2 10.8 119 3-124 236-360 (391)
18 2iyf_A OLED, oleandomycin glyc 99.9 7E-22 2.4E-26 143.3 12.0 120 2-123 246-370 (430)
19 3oti_A CALG3; calicheamicin, T 99.9 5.9E-22 2E-26 142.7 7.9 115 3-123 249-368 (398)
20 3otg_A CALG1; calicheamicin, T 99.9 6.6E-21 2.3E-25 137.2 12.3 119 3-123 257-379 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 8.3E-20 2.9E-24 130.9 7.7 114 7-122 197-326 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.8 1.4E-18 4.9E-23 117.2 7.1 101 10-117 54-196 (224)
23 3hbm_A UDP-sugar hydrolase; PS 99.5 3.2E-14 1.1E-18 99.0 9.2 94 5-101 172-273 (282)
24 1f0k_A MURG, UDP-N-acetylgluco 99.5 4.9E-14 1.7E-18 99.7 5.7 110 6-117 199-322 (364)
25 2f9f_A First mannosyl transfer 99.0 2.4E-09 8.4E-14 69.0 8.7 111 4-123 36-165 (177)
26 1v4v_A UDP-N-acetylglucosamine 98.7 4.5E-08 1.5E-12 69.4 8.4 96 17-122 230-336 (376)
27 1vgv_A UDP-N-acetylglucosamine 98.7 2.2E-08 7.7E-13 71.0 6.4 96 17-122 238-344 (384)
28 3dzc_A UDP-N-acetylglucosamine 98.7 9.8E-09 3.3E-13 74.2 4.5 107 6-122 247-369 (396)
29 3ot5_A UDP-N-acetylglucosamine 98.7 2.6E-08 8.9E-13 72.2 6.1 107 6-122 241-363 (403)
30 4hwg_A UDP-N-acetylglucosamine 98.7 8E-08 2.7E-12 69.3 7.9 109 4-123 220-345 (385)
31 3beo_A UDP-N-acetylglucosamine 98.6 9.5E-08 3.2E-12 67.5 7.3 81 34-122 263-344 (375)
32 2gek_A Phosphatidylinositol ma 98.6 4.6E-08 1.6E-12 69.6 4.7 82 33-122 262-351 (406)
33 2xci_A KDO-transferase, 3-deox 98.5 2.3E-06 7.9E-11 61.3 11.8 84 34-124 260-349 (374)
34 3okp_A GDP-mannose-dependent a 98.5 1.3E-07 4.4E-12 67.0 4.4 99 17-122 229-346 (394)
35 2iw1_A Lipopolysaccharide core 98.5 1.7E-07 5.8E-12 66.0 4.9 110 5-122 210-339 (374)
36 2x6q_A Trehalose-synthase TRET 98.4 8.6E-07 2.9E-11 63.6 7.7 81 32-122 291-381 (416)
37 2bfw_A GLGA glycogen synthase; 98.4 3.2E-07 1.1E-11 59.5 5.0 81 35-122 96-183 (200)
38 3c48_A Predicted glycosyltrans 98.4 3.3E-07 1.1E-11 66.0 5.4 85 32-122 304-393 (438)
39 2vsy_A XCC0866; transferase, g 98.3 2.1E-06 7.2E-11 64.0 8.4 86 34-122 434-524 (568)
40 2iuy_A Avigt4, glycosyltransfe 98.3 2.4E-07 8.2E-12 64.9 2.9 106 4-118 175-306 (342)
41 2x0d_A WSAF; GT4 family, trans 98.3 2.7E-06 9.3E-11 61.7 7.5 85 33-124 294-383 (413)
42 3fro_A GLGA glycogen synthase; 98.2 3.7E-06 1.3E-10 60.1 7.8 85 32-123 309-399 (439)
43 2r60_A Glycosyl transferase, g 98.2 1.9E-06 6.3E-11 63.4 5.5 85 32-122 333-426 (499)
44 3oy2_A Glycosyltransferase B73 98.2 1.2E-06 4.2E-11 62.6 4.3 80 36-122 256-357 (413)
45 2jjm_A Glycosyl transferase, g 98.2 1E-06 3.5E-11 62.7 3.5 82 33-122 266-352 (394)
46 3qhp_A Type 1 capsular polysac 98.2 3E-07 1E-11 58.0 0.7 110 5-122 16-142 (166)
47 3q3e_A HMW1C-like glycosyltran 98.0 3E-05 1E-09 59.1 9.2 118 2-122 454-590 (631)
48 2hy7_A Glucuronosyltransferase 98.0 8.5E-05 2.9E-09 53.6 10.1 93 17-122 247-354 (406)
49 1rzu_A Glycogen synthase 1; gl 97.9 1.2E-05 4.2E-10 58.7 5.0 97 16-121 319-444 (485)
50 2qzs_A Glycogen synthase; glyc 97.9 1.7E-05 5.9E-10 57.9 5.6 97 16-121 320-445 (485)
51 4gyw_A UDP-N-acetylglucosamine 97.9 6E-05 2.1E-09 58.4 8.3 101 1-101 535-652 (723)
52 3rhz_A GTF3, nucleotide sugar 97.7 0.0002 6.7E-09 50.9 7.6 92 17-118 199-302 (339)
53 3s28_A Sucrose synthase 1; gly 97.6 4.7E-05 1.6E-09 59.8 4.6 85 32-122 638-736 (816)
54 3vue_A GBSS-I, granule-bound s 97.1 0.0014 4.8E-08 49.1 7.2 103 11-119 350-476 (536)
55 2iz6_A Molybdenum cofactor car 96.4 0.09 3.1E-06 33.8 11.2 78 36-120 91-174 (176)
56 1rcu_A Conserved hypothetical 96.2 0.072 2.5E-06 34.9 9.3 36 44-80 111-150 (195)
57 1psw_A ADP-heptose LPS heptosy 95.9 0.016 5.3E-07 40.5 5.5 74 2-78 198-286 (348)
58 2gt1_A Lipopolysaccharide hept 95.6 0.02 6.8E-07 39.7 5.0 112 2-122 195-324 (326)
59 3tov_A Glycosyl transferase fa 95.4 0.032 1.1E-06 39.4 5.5 115 2-120 202-347 (349)
60 1ydh_A AT5G11950; structural g 94.9 0.29 9.8E-06 32.5 8.8 77 36-117 89-187 (216)
61 3nb0_A Glycogen [starch] synth 94.7 0.063 2.1E-06 41.7 5.7 68 45-118 513-592 (725)
62 1uqt_A Alpha, alpha-trehalose- 94.0 0.043 1.5E-06 40.6 3.5 77 36-121 333-420 (482)
63 3t5t_A Putative glycosyltransf 93.9 0.069 2.4E-06 39.8 4.4 79 35-121 353-439 (496)
64 1t35_A Hypothetical protein YV 93.6 0.9 3.1E-05 29.4 9.5 76 37-117 82-179 (191)
65 2i2c_A Probable inorganic poly 93.4 0.098 3.4E-06 35.8 4.2 30 51-80 34-69 (272)
66 3sbx_A Putative uncharacterize 92.1 1.4 4.7E-05 28.6 8.1 29 51-79 107-145 (189)
67 1yt5_A Inorganic polyphosphate 91.8 0.19 6.3E-06 34.1 3.9 54 51-120 40-96 (258)
68 3qua_A Putative uncharacterize 91.8 0.56 1.9E-05 30.7 6.0 43 36-79 101-154 (199)
69 1u0t_A Inorganic polyphosphate 91.3 0.58 2E-05 32.5 6.1 75 4-80 20-107 (307)
70 1wek_A Hypothetical protein TT 90.6 2.5 8.7E-05 27.9 8.8 29 51-79 130-169 (217)
71 2a33_A Hypothetical protein; s 88.3 4 0.00014 26.9 10.0 76 37-117 94-191 (215)
72 2an1_A Putative kinase; struct 87.5 0.5 1.7E-05 32.4 3.4 71 4-80 21-95 (292)
73 3pfn_A NAD kinase; structural 85.0 0.61 2.1E-05 33.4 2.8 28 51-78 107-138 (365)
74 1eiw_A Hypothetical protein MT 81.6 2.2 7.4E-05 25.2 3.8 64 51-119 37-109 (111)
75 1z0s_A Probable inorganic poly 80.2 5.3 0.00018 27.4 5.9 30 51-80 67-99 (278)
76 3mcu_A Dipicolinate synthase, 79.4 11 0.00037 24.7 8.5 73 51-123 83-187 (207)
77 3ehd_A Uncharacterized conserv 78.4 10 0.00034 23.9 6.5 62 51-118 68-161 (162)
78 3afo_A NADH kinase POS5; alpha 74.6 2.5 8.6E-05 30.5 3.2 30 51-80 113-147 (388)
79 2q5c_A NTRC family transcripti 74.1 1.3 4.3E-05 28.8 1.4 52 50-102 49-103 (196)
80 1q6z_A BFD, BFDC, benzoylforma 69.9 16 0.00056 26.9 6.7 73 6-78 5-95 (528)
81 3s2u_A UDP-N-acetylglucosamine 69.5 19 0.00066 25.1 6.8 72 7-78 20-121 (365)
82 2pju_A Propionate catabolism o 69.5 1.8 6E-05 28.8 1.3 30 51-81 62-91 (225)
83 3to5_A CHEY homolog; alpha(5)b 67.7 17 0.00058 21.7 8.4 54 64-119 74-132 (134)
84 1ozh_A ALS, acetolactate synth 67.6 29 0.00098 26.0 7.7 72 6-79 14-106 (566)
85 3l7i_A Teichoic acid biosynthe 65.9 2.4 8.1E-05 32.8 1.5 74 38-118 603-681 (729)
86 2qxy_A Response regulator; reg 65.3 17 0.00059 20.9 10.3 50 71-122 74-123 (142)
87 3lq1_A 2-succinyl-5-enolpyruvy 65.1 33 0.0011 25.7 7.6 75 5-79 13-107 (578)
88 2khz_A C-MYC-responsive protei 64.8 2.5 8.5E-05 26.6 1.3 65 51-119 76-150 (165)
89 4feg_A Pyruvate oxidase; carba 64.7 22 0.00074 26.9 6.6 75 5-79 13-108 (603)
90 2bon_A Lipid kinase; DAG kinas 63.7 4.3 0.00015 28.3 2.4 31 51-81 81-119 (332)
91 3s40_A Diacylglycerol kinase; 63.6 5.6 0.00019 27.3 3.0 31 51-81 62-98 (304)
92 1v5e_A Pyruvate oxidase; oxido 63.4 45 0.0015 25.1 9.4 73 6-78 7-100 (590)
93 2f62_A Nucleoside 2-deoxyribos 62.8 7.4 0.00025 24.4 3.2 66 4-79 27-105 (161)
94 2qv7_A Diacylglycerol kinase D 62.7 6.4 0.00022 27.4 3.2 31 51-81 79-115 (337)
95 2gkg_A Response regulator homo 62.4 18 0.00061 20.1 5.2 48 71-121 79-126 (127)
96 3bq9_A Predicted rossmann fold 62.3 20 0.00069 26.5 5.7 28 51-78 244-284 (460)
97 4gud_A Imidazole glycerol phos 62.2 19 0.00064 23.0 5.2 53 6-79 15-79 (211)
98 3lqk_A Dipicolinate synthase s 62.2 25 0.00087 22.8 5.7 73 51-123 85-189 (201)
99 4e5s_A MCCFLIKE protein (BA_56 61.6 21 0.00073 25.0 5.7 42 37-80 93-136 (331)
100 1g63_A Epidermin modifying enz 59.5 31 0.0011 21.9 7.6 88 7-98 19-140 (181)
101 2lnd_A De novo designed protei 59.3 21 0.00071 19.8 6.0 49 70-119 49-100 (112)
102 3nhm_A Response regulator; pro 59.3 11 0.00037 21.4 3.4 55 64-121 64-123 (133)
103 3hww_A 2-succinyl-5-enolpyruvy 58.5 43 0.0015 24.9 7.2 75 5-79 10-104 (556)
104 1t9b_A Acetolactate synthase, 57.4 56 0.0019 25.2 7.8 74 5-79 84-178 (677)
105 3eya_A Pyruvate dehydrogenase 57.2 24 0.00082 26.2 5.6 75 5-79 5-99 (549)
106 3grc_A Sensor protein, kinase; 56.8 11 0.00039 21.6 3.2 56 64-120 67-127 (140)
107 1p3y_1 MRSD protein; flavoprot 56.7 36 0.0012 21.9 6.8 111 7-120 25-186 (194)
108 2e6x_A TT1592, hypothetical pr 56.3 18 0.0006 19.1 3.4 34 11-46 4-37 (69)
109 3zqu_A Probable aromatic acid 56.0 32 0.0011 22.5 5.4 46 53-98 95-161 (209)
110 2x7j_A 2-succinyl-5-enolpyruvy 56.0 43 0.0015 25.2 6.8 76 4-79 32-127 (604)
111 3qjg_A Epidermin biosynthesis 55.5 22 0.00076 22.5 4.5 89 7-97 22-142 (175)
112 1wzu_A Quinolinate synthetase 55.5 49 0.0017 23.0 6.7 78 33-116 101-187 (300)
113 3ilh_A Two component response 54.1 29 0.00098 19.8 6.6 51 71-123 91-142 (146)
114 2gk4_A Conserved hypothetical 53.5 46 0.0016 22.1 6.2 58 5-62 31-94 (232)
115 2wvg_A PDC, pyruvate decarboxy 53.5 67 0.0023 23.9 7.5 73 5-78 5-97 (568)
116 3sr3_A Microcin immunity prote 51.8 27 0.00094 24.4 4.9 27 54-80 109-137 (336)
117 1ybh_A Acetolactate synthase, 51.3 41 0.0014 25.2 6.1 75 5-79 14-108 (590)
118 1weh_A Conserved hypothetical 49.8 14 0.00048 23.2 2.9 27 51-78 96-133 (171)
119 2iht_A Carboxyethylarginine sy 48.9 81 0.0028 23.5 8.3 73 5-78 14-105 (573)
120 2vbi_A Pyruvate decarboxylase; 48.5 67 0.0023 23.9 6.8 73 5-78 5-97 (566)
121 1s2d_A Purine trans deoxyribos 48.3 22 0.00074 22.3 3.6 29 51-79 80-116 (167)
122 2c31_A Oxalyl-COA decarboxylas 48.3 42 0.0014 25.0 5.7 75 5-79 12-105 (568)
123 3llv_A Exopolyphosphatase-rela 47.2 40 0.0014 19.6 5.5 108 7-121 19-138 (141)
124 3kto_A Response regulator rece 46.4 39 0.0013 19.2 9.0 48 71-120 79-126 (136)
125 4h1h_A LMO1638 protein; MCCF-l 46.2 49 0.0017 23.0 5.5 16 5-20 31-46 (327)
126 3ke2_A Uncharacterized protein 45.6 46 0.0016 19.7 4.5 46 1-48 45-92 (117)
127 4fyk_A Deoxyribonucleoside 5'- 45.5 5.8 0.0002 24.7 0.5 110 4-120 19-142 (152)
128 3kux_A Putative oxidoreductase 44.8 70 0.0024 22.0 6.1 91 9-101 23-124 (352)
129 3q2i_A Dehydrogenase; rossmann 44.6 45 0.0015 23.0 5.1 91 8-101 27-132 (354)
130 3mxo_A Serine/threonine-protei 44.2 10 0.00035 24.1 1.6 22 54-75 138-159 (202)
131 3qrx_B Melittin; calcium-bindi 44.1 6.4 0.00022 16.5 0.4 17 61-77 1-17 (26)
132 3tla_A MCCF; serine protease, 43.0 40 0.0014 24.0 4.6 18 4-21 61-78 (371)
133 3kke_A LACI family transcripti 42.9 65 0.0022 21.3 5.6 29 51-79 70-101 (303)
134 2q28_A Oxalyl-COA decarboxylas 42.9 57 0.002 24.2 5.7 75 5-79 10-103 (564)
135 3maj_A DNA processing chain A; 41.4 57 0.002 23.5 5.2 49 62-115 252-302 (382)
136 2pgn_A Cyclohexane-1,2-dione h 40.5 47 0.0016 24.9 4.9 74 5-78 6-100 (589)
137 3oqb_A Oxidoreductase; structu 39.9 93 0.0032 21.6 6.8 78 41-119 72-157 (383)
138 4gx0_A TRKA domain protein; me 38.6 1.2E+02 0.004 22.5 7.0 102 7-110 361-470 (565)
139 1mvl_A PPC decarboxylase athal 38.5 56 0.0019 21.3 4.5 70 51-121 95-200 (209)
140 3mm4_A Histidine kinase homolo 38.4 72 0.0024 19.9 5.2 48 71-121 150-197 (206)
141 3lua_A Response regulator rece 37.7 56 0.0019 18.5 11.1 50 71-122 80-129 (140)
142 3u3x_A Oxidoreductase; structu 36.4 1.1E+02 0.0036 21.3 8.1 91 9-101 42-145 (361)
143 1f8y_A Nucleoside 2-deoxyribos 36.4 38 0.0013 20.9 3.3 29 51-79 77-113 (157)
144 1zl0_A Hypothetical protein PA 36.2 55 0.0019 22.7 4.4 17 5-21 33-49 (311)
145 3f6c_A Positive transcription 36.0 52 0.0018 18.4 3.8 50 72-123 74-123 (134)
146 3h1g_A Chemotaxis protein CHEY 36.0 58 0.002 18.2 7.8 55 64-120 68-127 (129)
147 4e7p_A Response regulator; DNA 35.7 64 0.0022 18.6 6.7 57 64-122 83-142 (150)
148 3gt7_A Sensor protein; structu 35.5 66 0.0023 18.7 10.5 55 64-120 68-127 (154)
149 4hcj_A THIJ/PFPI domain protei 35.2 71 0.0024 19.9 4.5 58 5-63 23-80 (177)
150 1ujc_A Phosphohistidine phosph 34.8 30 0.001 21.0 2.7 23 53-75 102-124 (161)
151 3hjg_A Putative alpha-ribazole 34.6 17 0.0006 23.3 1.6 23 52-74 142-164 (213)
152 3t6k_A Response regulator rece 34.6 65 0.0022 18.3 7.4 48 72-121 78-125 (136)
153 3uqz_A DNA processing protein 34.6 42 0.0014 23.2 3.5 45 63-112 232-278 (288)
154 1qhf_A Protein (phosphoglycera 33.5 19 0.00063 23.5 1.6 23 53-75 175-197 (240)
155 3ip3_A Oxidoreductase, putativ 33.2 1E+02 0.0035 21.0 5.4 87 10-97 18-120 (337)
156 3eoz_A Putative phosphoglycera 33.0 19 0.00066 23.1 1.6 22 54-75 150-171 (214)
157 3l6u_A ABC-type sugar transpor 31.7 75 0.0026 20.7 4.4 66 5-79 26-96 (293)
158 1zym_A Enzyme I; phosphotransf 31.6 71 0.0024 21.5 4.3 46 33-78 154-204 (258)
159 3gl9_A Response regulator; bet 31.3 70 0.0024 17.7 10.0 54 64-119 63-121 (122)
160 3gp3_A 2,3-bisphosphoglycerate 31.0 21 0.00073 23.5 1.6 24 52-75 183-206 (257)
161 1e58_A Phosphoglycerate mutase 31.0 21 0.00073 23.3 1.6 24 52-75 176-199 (249)
162 3kkk_A Phosphoglycerate mutase 31.0 21 0.00073 23.4 1.6 23 52-74 185-207 (258)
163 1u7z_A Coenzyme A biosynthesis 30.9 1.1E+02 0.0039 20.0 6.2 57 5-62 36-97 (226)
164 4fb5_A Probable oxidoreductase 30.5 1.3E+02 0.0045 20.6 6.8 83 17-101 56-151 (393)
165 3euw_A MYO-inositol dehydrogen 30.5 1.3E+02 0.0044 20.5 9.0 91 8-101 18-122 (344)
166 3irs_A Uncharacterized protein 30.2 23 0.00077 23.9 1.6 60 4-70 138-201 (291)
167 3moi_A Probable dehydrogenase; 30.1 1.4E+02 0.0048 20.8 6.5 91 8-101 17-121 (387)
168 3c8m_A Homoserine dehydrogenas 30.0 70 0.0024 22.2 4.1 57 43-100 78-145 (331)
169 2dri_A D-ribose-binding protei 29.7 99 0.0034 19.9 4.7 65 5-78 19-88 (271)
170 2qr3_A Two-component system re 29.7 78 0.0027 17.7 5.8 50 71-122 79-128 (140)
171 3m9w_A D-xylose-binding peripl 29.6 98 0.0033 20.4 4.8 67 4-79 19-90 (313)
172 3tb6_A Arabinose metabolism tr 29.2 87 0.003 20.3 4.4 29 51-79 70-106 (298)
173 3evn_A Oxidoreductase, GFO/IDH 29.1 1.4E+02 0.0046 20.3 11.3 94 8-101 19-124 (329)
174 3e18_A Oxidoreductase; dehydro 28.8 1.5E+02 0.005 20.6 7.0 92 8-101 19-122 (359)
175 3hdv_A Response regulator; PSI 28.8 81 0.0028 17.6 6.8 58 64-123 69-130 (136)
176 3eqz_A Response regulator; str 28.7 79 0.0027 17.5 4.7 51 71-122 73-127 (135)
177 3e9m_A Oxidoreductase, GFO/IDH 28.4 1.4E+02 0.0048 20.3 8.2 92 8-101 19-124 (330)
178 3eod_A Protein HNR; response r 28.3 81 0.0028 17.4 9.6 50 72-123 79-129 (130)
179 3uhj_A Probable glycerol dehyd 28.3 51 0.0017 23.5 3.2 30 51-81 105-139 (387)
180 3fwz_A Inner membrane protein 28.3 92 0.0032 18.1 7.4 105 6-118 19-137 (140)
181 3b2n_A Uncharacterized protein 28.2 84 0.0029 17.6 6.7 57 64-122 66-125 (133)
182 3c7t_A Ecdysteroid-phosphate p 28.2 26 0.00088 23.2 1.6 23 53-75 186-208 (263)
183 4had_A Probable oxidoreductase 28.1 1.4E+02 0.0049 20.3 7.9 91 9-101 39-143 (350)
184 2yf0_A Myotubularin-related pr 28.1 71 0.0024 24.0 4.0 37 88-124 322-359 (512)
185 2qsj_A DNA-binding response re 28.0 90 0.0031 17.9 5.7 50 71-122 77-126 (154)
186 1fzt_A Phosphoglycerate mutase 28.0 23 0.00079 22.5 1.3 23 53-75 157-179 (211)
187 4eo9_A 2,3-bisphosphoglycerate 27.9 26 0.00089 23.3 1.6 24 52-75 199-222 (268)
188 3keo_A Redox-sensing transcrip 27.7 73 0.0025 20.8 3.7 37 2-39 157-193 (212)
189 2qni_A AGR_C_517P, uncharacter 27.5 27 0.00093 22.6 1.6 24 53-76 157-180 (219)
190 3f3k_A Uncharacterized protein 27.4 30 0.001 22.9 1.8 23 53-75 170-192 (265)
191 2ap9_A NAG kinase, acetylgluta 27.2 1.5E+02 0.005 20.1 5.8 63 37-103 224-291 (299)
192 1h2e_A Phosphatase, YHFR; hydr 27.1 28 0.00096 22.1 1.6 23 53-75 144-166 (207)
193 3e61_A Putative transcriptiona 27.0 1.2E+02 0.004 19.6 4.7 67 5-80 26-94 (277)
194 3gv0_A Transcriptional regulat 26.9 1.3E+02 0.0046 19.5 5.2 66 5-79 28-96 (288)
195 3o9z_A Lipopolysaccaride biosy 26.6 1.5E+02 0.0052 20.1 11.5 92 8-101 18-129 (312)
196 2rfl_A Putative phosphohistidi 26.5 32 0.0011 21.2 1.7 22 53-74 109-130 (173)
197 3cz5_A Two-component response 26.5 97 0.0033 17.8 5.9 50 71-122 78-127 (153)
198 1q7r_A Predicted amidotransfer 26.3 1E+02 0.0035 19.7 4.2 29 51-79 59-101 (219)
199 3lte_A Response regulator; str 26.3 89 0.003 17.3 6.4 57 64-122 67-127 (132)
200 3evt_A Phosphoglycerate dehydr 26.2 1.3E+02 0.0043 20.9 4.9 86 7-96 150-246 (324)
201 3d4i_A STS-2 protein; PGM, 2H- 26.1 31 0.0011 22.9 1.7 22 54-75 197-218 (273)
202 1kq3_A Glycerol dehydrogenase; 26.0 57 0.002 23.0 3.1 29 52-81 94-127 (376)
203 3my7_A Alcohol dehydrogenase/a 25.9 71 0.0024 23.2 3.7 34 45-78 179-212 (452)
204 2a6p_A Possible phosphoglycera 25.8 30 0.001 22.0 1.6 23 53-75 146-168 (208)
205 3jy6_A Transcriptional regulat 25.8 1.4E+02 0.0047 19.3 5.1 67 5-80 25-93 (276)
206 2rjn_A Response regulator rece 25.8 1E+02 0.0035 17.7 9.5 47 71-119 78-125 (154)
207 3d8h_A Glycolytic phosphoglyce 25.5 30 0.001 23.0 1.6 23 53-75 195-217 (267)
208 4fe7_A Xylose operon regulator 25.5 1.7E+02 0.006 20.4 6.6 61 5-78 42-103 (412)
209 1mvo_A PHOP response regulator 25.4 94 0.0032 17.3 4.3 50 71-122 74-123 (136)
210 1jg5_A GTP cyclohydrolase I fe 25.4 73 0.0025 17.5 2.8 19 8-26 54-72 (83)
211 3tl4_X Glutaminyl-tRNA synthet 25.2 44 0.0015 21.5 2.2 21 94-119 111-131 (187)
212 2hhj_A Bisphosphoglycerate mut 25.2 31 0.0011 22.9 1.6 23 53-75 182-204 (267)
213 3mbk_A Ubiquitin-associated an 25.1 21 0.00072 23.6 0.7 23 53-75 187-209 (264)
214 1k66_A Phytochrome response re 25.0 99 0.0034 17.4 6.4 53 64-118 79-136 (149)
215 3fhl_A Putative oxidoreductase 25.0 1.7E+02 0.0059 20.1 11.1 90 10-101 22-122 (362)
216 4emb_A 2,3-bisphosphoglycerate 25.0 32 0.0011 22.9 1.6 24 52-75 201-224 (274)
217 3ezy_A Dehydrogenase; structur 25.0 1.7E+02 0.0057 20.0 7.5 92 8-101 16-121 (344)
218 1yfk_A Phosphoglycerate mutase 24.9 32 0.0011 22.8 1.6 23 52-74 179-201 (262)
219 2h54_A Caspase-1; allosteric s 24.6 1.1E+02 0.0037 19.3 4.0 37 82-119 65-101 (178)
220 3rf7_A Iron-containing alcohol 24.4 70 0.0024 22.7 3.3 29 52-81 109-160 (375)
221 3c85_A Putative glutathione-re 24.3 1.3E+02 0.0043 18.3 6.4 110 7-118 52-175 (183)
222 2fn9_A Ribose ABC transporter, 24.1 1.5E+02 0.0052 19.1 5.0 64 5-78 20-89 (290)
223 3ngx_A Bifunctional protein fo 24.0 1.8E+02 0.006 19.9 5.2 52 72-123 26-85 (276)
224 2ejb_A Probable aromatic acid 23.9 1.4E+02 0.0049 18.9 5.7 49 51-99 80-149 (189)
225 3k5i_A Phosphoribosyl-aminoimi 23.8 1.9E+02 0.0067 20.3 9.1 110 5-117 35-159 (403)
226 1uuy_A CNX1, molybdopterin bio 23.8 34 0.0012 21.2 1.5 13 51-63 70-82 (167)
227 3g85_A Transcriptional regulat 23.6 1.5E+02 0.0053 19.1 6.1 66 5-79 30-98 (289)
228 4a3s_A 6-phosphofructokinase; 23.6 1.4E+02 0.0046 20.8 4.6 60 59-118 172-238 (319)
229 2nxw_A Phenyl-3-pyruvate decar 23.4 78 0.0027 23.6 3.6 74 5-79 23-117 (565)
230 3m2t_A Probable dehydrogenase; 23.4 1.9E+02 0.0064 20.0 9.3 91 9-101 21-125 (359)
231 3uug_A Multiple sugar-binding 23.3 89 0.003 20.8 3.6 65 5-79 21-91 (330)
232 3iwt_A 178AA long hypothetical 23.2 34 0.0012 21.3 1.4 13 51-63 80-92 (178)
233 1fw8_A PGK P72, phosphoglycera 23.2 79 0.0027 23.1 3.4 86 4-101 119-210 (416)
234 3snk_A Response regulator CHEY 23.2 1.1E+02 0.0037 17.1 11.5 47 72-120 87-133 (135)
235 3ox4_A Alcohol dehydrogenase 2 23.0 72 0.0024 22.6 3.2 30 51-81 87-139 (383)
236 3n0r_A Response regulator; sig 23.0 29 0.00098 23.4 1.1 45 72-120 233-277 (286)
237 3cnb_A DNA-binding response re 22.9 1.1E+02 0.0037 17.1 6.2 57 64-122 71-132 (143)
238 3klo_A Transcriptional regulat 22.9 59 0.002 20.5 2.6 50 71-122 82-131 (225)
239 3eul_A Possible nitrate/nitrit 22.8 1.2E+02 0.004 17.4 6.1 57 64-122 78-137 (152)
240 1zh8_A Oxidoreductase; TM0312, 22.8 1.9E+02 0.0064 19.8 7.6 92 8-101 33-139 (340)
241 1iuk_A Hypothetical protein TT 22.8 1.3E+02 0.0044 17.8 7.8 90 6-100 29-122 (140)
242 2ioy_A Periplasmic sugar-bindi 22.7 1.1E+02 0.0037 19.9 3.9 65 5-78 19-88 (283)
243 3iv7_A Alcohol dehydrogenase I 22.6 79 0.0027 22.3 3.3 75 7-82 26-122 (364)
244 3f4l_A Putative oxidoreductase 22.4 1.9E+02 0.0065 19.7 6.7 83 17-101 28-122 (345)
245 3k9d_A LMO1179 protein, aldehy 22.3 61 0.0021 23.6 2.8 34 45-78 184-217 (464)
246 3cs3_A Sugar-binding transcrip 22.3 1.6E+02 0.0056 18.9 8.2 23 4-26 25-47 (277)
247 1y5e_A Molybdenum cofactor bio 22.2 37 0.0013 21.1 1.4 12 52-63 72-83 (169)
248 3e82_A Putative oxidoreductase 22.2 2E+02 0.0068 19.9 8.1 91 9-101 23-124 (364)
249 1mb3_A Cell division response 22.0 1.1E+02 0.0036 16.6 6.2 55 64-120 62-121 (124)
250 3i23_A Oxidoreductase, GFO/IDH 21.9 2E+02 0.0068 19.7 7.1 91 9-101 18-122 (349)
251 3fij_A LIN1909 protein; 11172J 21.9 1E+02 0.0034 20.3 3.6 37 51-88 60-123 (254)
252 1zsq_A Myotubularin-related pr 21.9 95 0.0033 23.4 3.7 37 88-124 334-371 (528)
253 3l49_A ABC sugar (ribose) tran 21.8 1.7E+02 0.0058 18.9 4.9 67 5-80 23-94 (291)
254 2uz1_A Benzaldehyde lyase; thi 21.8 89 0.003 23.2 3.6 74 5-78 6-98 (563)
255 3gyb_A Transcriptional regulat 21.7 1.7E+02 0.0057 18.8 6.6 62 4-78 22-85 (280)
256 2pbq_A Molybdenum cofactor bio 21.7 40 0.0014 21.2 1.5 12 52-63 68-79 (178)
257 3hg7_A D-isomer specific 2-hyd 21.7 2.1E+02 0.0071 19.8 5.5 51 7-61 153-203 (324)
258 2wqk_A 5'-nucleotidase SURE; S 21.3 36 0.0012 22.9 1.3 31 51-81 84-128 (251)
259 3g1w_A Sugar ABC transporter; 20.9 1.5E+02 0.0051 19.4 4.4 68 5-80 22-94 (305)
260 3gdo_A Uncharacterized oxidore 20.9 2.1E+02 0.0072 19.7 7.4 90 10-101 22-122 (358)
261 1mkz_A Molybdenum cofactor bio 20.8 41 0.0014 21.0 1.4 12 52-63 69-80 (172)
262 2is8_A Molybdopterin biosynthe 20.8 42 0.0015 20.7 1.5 12 52-63 62-73 (164)
263 3k4h_A Putative transcriptiona 20.8 1.5E+02 0.0051 19.1 4.3 65 5-78 31-98 (292)
264 3heb_A Response regulator rece 20.6 1.3E+02 0.0045 17.2 6.8 53 64-118 76-133 (152)
265 3pzy_A MOG; ssgcid, seattle st 20.4 43 0.0015 20.8 1.4 12 52-63 66-77 (164)
266 1jlj_A Gephyrin; globular alph 20.3 44 0.0015 21.3 1.5 12 52-63 78-89 (189)
267 1ta9_A Glycerol dehydrogenase; 20.3 84 0.0029 22.9 3.1 29 52-81 145-178 (450)
268 1xpj_A Hypothetical protein; s 20.1 1.2E+02 0.0042 17.3 3.4 25 4-28 27-51 (126)
269 2vk8_A Pyruvate decarboxylase 20.1 88 0.003 23.2 3.3 74 5-79 6-99 (563)
No 1
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.6e-28 Score=156.95 Aligned_cols=122 Identities=34% Similarity=0.702 Sum_probs=112.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
+.+.+..+++++.+.+++++|++|+......++|+++.+|+|+.+++.|+.||++|||||++|++|++++|+|+|++|..
T Consensus 36 ~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~ 115 (170)
T 2o6l_A 36 TEERANVIASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLF 115 (170)
T ss_dssp CHHHHHHHHHHHTTSSSEEEEECCSSCCTTCCTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CHHHHHHHHHHHHhCCCeEEEEECCcCcccCCCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccch
Confidence 56788999999998899999999876555567899999999999988778999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.||..|++.+++.|+|+.+..++++.+++.++|+++++++++
T Consensus 116 ~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 157 (170)
T 2o6l_A 116 ADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVINDPSY 157 (170)
T ss_dssp TTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCHHH
T ss_pred hhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcCHHH
Confidence 999999999999999999988888999999999999988765
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=99.95 E-value=1e-27 Score=176.52 Aligned_cols=120 Identities=26% Similarity=0.417 Sum_probs=109.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCCC--------CCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIEN--------LPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
+.+.+.+++++|++.+++|+|++|++.... .++|+++.+|+||.++|.|+++|+||||||+||++|++++|+
T Consensus 285 ~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~Gv 364 (456)
T 2c1x_A 285 PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGV 364 (456)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCc
Confidence 467889999999999999999998754211 246899999999999998889999999999999999999999
Q ss_pred CeeeecccccHHHHHHHHHHc-CceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 74 PIIGVPFYGDQLSHVRHIVDL-GAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 74 P~l~~P~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
|+|++|.+.||..||+++++. |+|+.+..+.++.++|.++|+++++++
T Consensus 365 P~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~ 413 (456)
T 2c1x_A 365 PLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 413 (456)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred eEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCC
Confidence 999999999999999999999 999999877889999999999999876
No 3
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=99.95 E-value=8.9e-28 Score=176.69 Aligned_cols=120 Identities=29% Similarity=0.509 Sum_probs=109.0
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC---CC-----CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS---IE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGI 73 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~---~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~ 73 (124)
+.+.+.+++++|++.+++|||+++++. .. ..++|+++++|+||.++|.|+.+++||||||+||++|++++|+
T Consensus 287 ~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~Gv 366 (454)
T 3hbf_A 287 PPHELTALAESLEECGFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGV 366 (454)
T ss_dssp CHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCC
Confidence 567899999999999999999998753 11 2457899999999999998878889999999999999999999
Q ss_pred CeeeecccccHHHHHHHHHHc-CceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 74 PIIGVPFYGDQLSHVRHIVDL-GAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 74 P~l~~P~~~~q~~~a~~~~~~-g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
|+|++|.+.||..||+++++. |+|+.+..+.++.++|.++|+++++++
T Consensus 367 P~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~ 415 (454)
T 3hbf_A 367 PMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSE 415 (454)
T ss_dssp CEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSH
T ss_pred CEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCC
Confidence 999999999999999999995 999999877899999999999999875
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=99.95 E-value=3e-27 Score=174.96 Aligned_cols=118 Identities=27% Similarity=0.399 Sum_probs=104.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC----------------CCCCCcE--------EEe-eccChHHhhcCCCcceE
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI----------------ENLPGNV--------HIR-KWIPQQDVLAHPNCRLF 56 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~----------------~~~~~~v--------~~~-~~~~~~~~l~~~~~d~~ 56 (124)
+.+.+.+++++|++.+++|||+++.... ...|+|+ .++ +|+||.++|.|+.+++|
T Consensus 282 ~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~f 361 (480)
T 2vch_A 282 TCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGF 361 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEE
T ss_pred CHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeE
Confidence 5678899999999999999999986421 1356664 445 59999999999888899
Q ss_pred EecCChhhHHHHHHhCCCeeeecccccHHHHHHHH-HHcCceeEecCC---CCCHHHHHHHHHHHhc
Q psy10186 57 ISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHI-VDLGAGVELSYF---NITLESIAWATSIVLN 119 (124)
Q Consensus 57 i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~-~~~g~g~~~~~~---~~~~~~l~~~l~~ll~ 119 (124)
|||||+||++|++++|+|+|++|.+.||..||+++ ++.|+|+.+..+ .++.++|.++|+++++
T Consensus 362 vtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~ 428 (480)
T 2vch_A 362 LTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLME 428 (480)
T ss_dssp EECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHT
T ss_pred EecccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999997 688999999765 6899999999999997
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=99.94 E-value=1e-26 Score=171.43 Aligned_cols=123 Identities=25% Similarity=0.441 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCC--CCCC-----C--CCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhC
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGD--SIEN-----L--PGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYG 72 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~--~~~~-----~--~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g 72 (124)
+.+.+.+++++|++.+++|||++|++ ...+ . ++++++++|+||.++|.|+++|+||||||+||++|++++|
T Consensus 291 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~G 370 (463)
T 2acv_A 291 GPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFG 370 (463)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcC
Confidence 56778999999999999999999975 2211 2 6689999999999999999999999999999999999999
Q ss_pred CCeeeecccccHHHHHHHH-HHcCceeEe-c---CC--CCCHHHHHHHHHHHhc-CCCCC
Q psy10186 73 IPIIGVPFYGDQLSHVRHI-VDLGAGVEL-S---YF--NITLESIAWATSIVLN-NPRRY 124 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~-~~~g~g~~~-~---~~--~~~~~~l~~~l~~ll~-~~~~r 124 (124)
+|+|++|.+.||..||+++ ++.|+|+.+ . .+ .++.++|.++|+++++ +++||
T Consensus 371 vP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~~~r 430 (463)
T 2acv_A 371 VPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVH 430 (463)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHH
T ss_pred CCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999995 789999998 3 34 6899999999999997 46654
No 6
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=99.94 E-value=8.9e-27 Score=172.37 Aligned_cols=119 Identities=27% Similarity=0.457 Sum_probs=107.0
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC-------CC-----CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS-------IE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~-------~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~ 69 (124)
+.+.+.+++++|++.+++|+|+++++. .. ..++|+++.+|+||.++|.|+.+++||||||+||++|++
T Consensus 309 ~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal 388 (482)
T 2pq6_A 309 TPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESI 388 (482)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHH
Confidence 456688999999999999999998642 11 125789999999999999999999999999999999999
Q ss_pred HhCCCeeeecccccHHHHHHHHH-HcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIV-DLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~-~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
++|+|+|++|.+.||..||++++ +.|+|+.+. ++++.++|.++|+++++++
T Consensus 389 ~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~-~~~~~~~l~~~i~~ll~~~ 440 (482)
T 2pq6_A 389 CAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGD 440 (482)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSH
T ss_pred HcCCCEEecCcccchHHHHHHHHHHhCEEEEEC-CCCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999997 689999998 6789999999999999887
No 7
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.92 E-value=5.6e-25 Score=159.47 Aligned_cols=118 Identities=20% Similarity=0.217 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
.+.+.++++++.+.+++++|++|.... ...++|+.+.+|+|+.+++ ++||++|||||++|++|++++|+|+|++|.
T Consensus 253 ~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p~ 330 (416)
T 1rrv_A 253 ADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVNFQALF--RRVAAVIHHGSAGTEHVATRAGVPQLVIPR 330 (416)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCccccccCCCCCEEEeccCChHHHh--ccCCEEEecCChhHHHHHHHcCCCEEEccC
Confidence 567888999999999999999887542 3457799999999999998 899999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
..||..||+++++.|+|+.+..++.+.+++.++++++ +|+++
T Consensus 331 ~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~ 372 (416)
T 1rrv_A 331 NTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LAPET 372 (416)
T ss_dssp SBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TSHHH
T ss_pred CCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hCHHH
Confidence 9999999999999999999987788999999999999 88764
No 8
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.92 E-value=4e-25 Score=158.73 Aligned_cols=115 Identities=23% Similarity=0.392 Sum_probs=98.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC---CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS---IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+.++++++.+.+.+++|.+++.. ....++|+++.+|+|+.++| +.+|+||||||+||++|++++|+|+|++|.
T Consensus 255 ~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~~lL--~~~~~~v~h~G~~s~~Eal~~GvP~v~~P~ 332 (400)
T 4amg_A 255 AKLAPLFSEVADVDAEFVLTLGGGDLALLGELPANVRVVEWIPLGALL--ETCDAIIHHGGSGTLLTALAAGVPQCVIPH 332 (400)
T ss_dssp STTHHHHHHGGGSSSEEEEECCTTCCCCCCCCCTTEEEECCCCHHHHH--TTCSEEEECCCHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHHHhhccCceEEEEecCccccccccCCCCEEEEeecCHHHHh--hhhhheeccCCccHHHHHHHhCCCEEEecC
Confidence 4567888999999999999988754 33478899999999999999 679999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
+.||..||+++++.|+|+.+...+.+.+ +|+++++||+||
T Consensus 333 ~~dQ~~na~~v~~~G~g~~l~~~~~~~~----al~~lL~d~~~r 372 (400)
T 4amg_A 333 GSYQDTNRDVLTGLGIGFDAEAGSLGAE----QCRRLLDDAGLR 372 (400)
T ss_dssp ---CHHHHHHHHHHTSEEECCTTTCSHH----HHHHHHHCHHHH
T ss_pred cccHHHHHHHHHHCCCEEEcCCCCchHH----HHHHHHcCHHHH
Confidence 9999999999999999999987776654 566778887664
No 9
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.92 E-value=1.6e-24 Score=156.93 Aligned_cols=119 Identities=20% Similarity=0.229 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+.+.+..+++++.+.+++++|++|+... .+.++|+++.+|+|+.+++ +.||++|||||+||+.|++++|+|+|++|
T Consensus 234 ~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~~ll--~~~d~~v~~gG~~t~~Eal~~GvP~v~~p 311 (404)
T 3h4t_A 234 PAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF--GRVAAVVHHGGAGTTTAVTRAGAPQVVVP 311 (404)
T ss_dssp CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHHHHH--hhCcEEEECCcHHHHHHHHHcCCCEEEcC
Confidence 4567889999999999999999987543 2357899999999999998 78999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
...||..|++++++.|+|..+..++++.++|.++++++++ ++|
T Consensus 312 ~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~-~~~ 354 (404)
T 3h4t_A 312 QKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT-PGI 354 (404)
T ss_dssp CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS-HHH
T ss_pred CcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC-HHH
Confidence 9999999999999999999998888899999999999997 654
No 10
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=99.92 E-value=1.2e-24 Score=157.74 Aligned_cols=119 Identities=19% Similarity=0.206 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
+.+.+..+++++.+.+.+++|++|.... ...++|+.+.+|+|+.+++ ++||++|||||++|++|++++|+|+|++|
T Consensus 251 ~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~~p 328 (415)
T 1iir_A 251 PADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNHQVLF--GRVAAVIHHGGAGTTHVAARAGAPQILLP 328 (415)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCCHHHHG--GGSSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred cHHHHHHHHHHHHHCCCeEEEEeCCCcccccCCCCCEEEeCcCChHHHH--hhCCEEEeCCChhHHHHHHHcCCCEEECC
Confidence 4677888999999999999999887542 2356799999999999998 89999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 80 FYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 80 ~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
...||..||+++++.|+|+.+..++++.+++.++|+++ +|+++
T Consensus 329 ~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~~~~ 371 (415)
T 1iir_A 329 QMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LTPET 371 (415)
T ss_dssp CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TSHHH
T ss_pred CCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cCHHH
Confidence 99999999999999999999987788999999999999 87654
No 11
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.91 E-value=2.5e-24 Score=156.20 Aligned_cols=120 Identities=26% Similarity=0.449 Sum_probs=107.7
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeee
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIG 77 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~ 77 (124)
+.+.+.++++++.+.+++++|++|+.. ....++|+++.+|+|+.++| +.||++|||||++|++|++++|+|+|+
T Consensus 269 ~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 269 HLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQLDIL--TKASAFITHAGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp CHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHHhcCCcEEEEEECCcCChHHhccCCCCeEEecCCCHHHHH--hhCCEEEECCchhHHHHHHHcCCCEEE
Confidence 356788899999888999999998743 22357899999999999988 779999999999999999999999999
Q ss_pred ecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 78 VPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 78 ~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
+|...||..||+++++.|+|+.+..++++.+++.++|+++++|+++
T Consensus 347 ~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 392 (424)
T 2iya_A 347 VPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVASDPGV 392 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred ecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcCHHH
Confidence 9999999999999999999999987788999999999999988754
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.90 E-value=2.3e-24 Score=157.33 Aligned_cols=118 Identities=23% Similarity=0.384 Sum_probs=105.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCC---CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSI---ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+..+++++.+.+++++|++|+... ...++|+++.+|+|+.+++ +.||++|||||++|++|++++|+|+|++|.
T Consensus 286 ~~~~~~~~al~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~V~~~G~~t~~Ea~~~G~P~i~~p~ 363 (441)
T 2yjn_A 286 VSIEELLGAVGDVDAEIIATFDAQQLEGVANIPDNVRTVGFVPMHALL--PTCAATVHHGGPGSWHTAAIHGVPQVILPD 363 (441)
T ss_dssp CSTTTTHHHHHTSSSEEEECCCTTTTSSCSSCCSSEEECCSCCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEEECCcchhhhccCCCCEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEeCC
Confidence 44567788888889999999987543 2357799999999998888 899999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
..||..||+++++.|+|+.+..++++.++|.++|+++++|+++
T Consensus 364 ~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 406 (441)
T 2yjn_A 364 GWDTGVRAQRTQEFGAGIALPVPELTPDQLRESVKRVLDDPAH 406 (441)
T ss_dssp SHHHHHHHHHHHHHTSEEECCTTTCCHHHHHHHHHHHHHCHHH
T ss_pred cccHHHHHHHHHHcCCEEEcccccCCHHHHHHHHHHHhcCHHH
Confidence 9999999999999999999988888999999999999988765
No 13
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.90 E-value=2.9e-23 Score=149.94 Aligned_cols=119 Identities=26% Similarity=0.434 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
.+.+..+++++.+.+++++|.+|+.. ....++|+++.+|+|+.+++ +.||++|+|||++|++|++++|+|+|++
T Consensus 262 ~~~~~~~~~al~~~~~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 262 PGFFRDCARAFDGQPWHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVL--EQATVCVTHGGMGTLMEALYWGRPLVVV 339 (415)
T ss_dssp HHHHHHHHHHHTTSSCEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHH--HHEEEEEESCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHH--hhCCEEEECCcHHHHHHHHHhCCCEEEe
Confidence 45688899999999999999998752 23467899999999999988 7799999999999999999999999999
Q ss_pred cccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 79 PFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
|...||..|++++++.|+|..+..++++.+++.++++++++|+++
T Consensus 340 p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 384 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAVAADPAL 384 (415)
T ss_dssp CCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHHHTCHHH
T ss_pred CCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHHHcCHHH
Confidence 999999999999999999999988888999999999999988764
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.89 E-value=4.6e-24 Score=152.87 Aligned_cols=117 Identities=20% Similarity=0.256 Sum_probs=105.1
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCC---CCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSI---ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+..+++++.+.+++++|++|+... ...++|+.+ +|+|+.+++ +.||++|+|||++|++||+++|+|+|++|.
T Consensus 231 ~~~~~~~~al~~~~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~~~~l--~~~d~~v~~~G~~t~~Ea~~~G~P~v~~p~ 307 (384)
T 2p6p_A 231 DFLRGLAKDLVRWDVELIVAAPDTVAEALRAEVPQARV-GWTPLDVVA--PTCDLLVHHAGGVSTLTGLSAGVPQLLIPK 307 (384)
T ss_dssp TTHHHHHHHHHTTTCEEEEECCHHHHHHHHHHCTTSEE-ECCCHHHHG--GGCSEEEECSCTTHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCCHHhhCCCCCceEE-cCCCHHHHH--hhCCEEEeCCcHHHHHHHHHhCCCEEEccC
Confidence 56788999999899999999886321 224679999 999999998 789999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
..||..|++++++.|+|+.+..++.+.+++.++++++++|+++
T Consensus 308 ~~dq~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 350 (384)
T 2p6p_A 308 GSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTY 350 (384)
T ss_dssp SHHHHHHHHHHHHHTSEEECCTTCCCHHHHHHHHHHHHHCHHH
T ss_pred cccchHHHHHHHHCCCeEecCcCCCCHHHHHHHHHHHHcCHHH
Confidence 9999999999999999999987788999999999999988765
No 15
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.89 E-value=1.2e-23 Score=151.39 Aligned_cols=119 Identities=22% Similarity=0.426 Sum_probs=99.7
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC---CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecc
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS---IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPF 80 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~ 80 (124)
+.+..+++++.+.+++++|++|+.. ....++|+++.+|+|+.+++ +.||++|+|||.+|++||+++|+|+|++|.
T Consensus 251 ~~~~~~~~al~~~~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 251 SLLQALSQELPKLGFEVVVAVSDKLAQTLQPLPEGVLAAGQFPLSAIM--PACDVVVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp CSHHHHHHHGGGGTCEEEECCCC--------CCTTEEEESCCCHHHHG--GGCSEEEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchhhhccCCCcEEEeCcCCHHHHH--hhCCEEEecCCHHHHHHHHHhCCCEEecCC
Confidence 4578889999988999999988754 23467899999999999999 679999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 81 YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 81 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
..||..|++++++.|+|+.+..++++.++|.++++++++|+++|
T Consensus 329 ~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~~ 372 (398)
T 4fzr_A 329 IAEVWDSARLLHAAGAGVEVPWEQAGVESVLAACARIRDDSSYV 372 (398)
T ss_dssp SGGGHHHHHHHHHTTSEEECC-------CHHHHHHHHHHCTHHH
T ss_pred chhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHHH
Confidence 99999999999999999999888888999999999999998753
No 16
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.89 E-value=1.4e-22 Score=145.27 Aligned_cols=119 Identities=26% Similarity=0.390 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
.+.+..+++++.+.+.+++|.+|+.. ....++|+++.+|+|+.+++ +.||++|+|||++|++|++++|+|+|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 323 (402)
T 3ia7_A 246 PEFFRACAQAFADTPWHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVL--AHARACLTHGTTGAVLEAFAAGVPLVLV 323 (402)
T ss_dssp HHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHH--TTEEEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEe
Confidence 35788899999988999999998752 23467899999999999988 7899999999999999999999999999
Q ss_pred cc-cccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 79 PF-YGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 79 P~-~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
|. ..||..|++.+++.|+|..+..++++.+++.++++++++|+++
T Consensus 324 p~~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~~~~ll~~~~~ 369 (402)
T 3ia7_A 324 PHFATEAAPSAERVIELGLGSVLRPDQLEPASIREAVERLAADSAV 369 (402)
T ss_dssp GGGCGGGHHHHHHHHHTTSEEECCGGGCSHHHHHHHHHHHHHCHHH
T ss_pred CCCcccHHHHHHHHHHcCCEEEccCCCCCHHHHHHHHHHHHcCHHH
Confidence 99 9999999999999999999988888999999999999988754
No 17
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.88 E-value=2.3e-22 Score=144.20 Aligned_cols=119 Identities=25% Similarity=0.391 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHhhC-CCeEEEEEcCCC---CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 3 DGMRTLLVTAFSRT-GLTVLWRYEGDS---IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 3 ~~~~~~~~~~l~~~-~~~~i~~~g~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
.+.+.+++++ .+. +++++|..|+.. ....++|+++.+|+|+.+++ +.||++|+|||.+|++||+++|+|+|++
T Consensus 236 ~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Ea~~~G~P~v~~ 312 (391)
T 3tsa_A 236 APLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNLFL--RTCELVICAGGSGTAFTATRLGIPQLVL 312 (391)
T ss_dssp HHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGGTG--GGCSEEEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHHHH--hhCCEEEeCCCHHHHHHHHHhCCCEEec
Confidence 5677888888 888 789999988753 34467899999999999988 8999999999999999999999999999
Q ss_pred cccccHHHHHHHHHHcCceeEecC--CCCCHHHHHHHHHHHhcCCCCC
Q psy10186 79 PFYGDQLSHVRHIVDLGAGVELSY--FNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~g~g~~~~~--~~~~~~~l~~~l~~ll~~~~~r 124 (124)
|...||..|++.+++.|+|..+.. ++.+.++|.++++++++|+++|
T Consensus 313 p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~~~~~ 360 (391)
T 3tsa_A 313 PQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGDTGFA 360 (391)
T ss_dssp CCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTCTHHH
T ss_pred CCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHHcCHHHH
Confidence 999999999999999999999987 6678999999999999998653
No 18
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.87 E-value=7e-22 Score=143.34 Aligned_cols=120 Identities=23% Similarity=0.437 Sum_probs=104.0
Q ss_pred CHHHHHHHHHHHhhC-CCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCee
Q psy10186 2 SDGMRTLLVTAFSRT-GLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPII 76 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~-~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l 76 (124)
+.+.+.++++++.+. +++++|++|... ....++|+.+.+|+|+.+++ +.+|++|+|||++|++||+++|+|+|
T Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~~~G~~t~~Ea~~~G~P~i 323 (430)
T 2iyf_A 246 QPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAIL--RQADLFVTHAGAGGSQEGLATATPMI 323 (430)
T ss_dssp CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGCSCCTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHTTCCEE
T ss_pred cHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhccCCCCeEEEecCCHHHHh--hccCEEEECCCccHHHHHHHhCCCEE
Confidence 356788889999886 889999988643 22356899999999999988 77999999999999999999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
++|...||..|++.+++.|+|+.+..++++.+++.++++++++|+++
T Consensus 324 ~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~~~ 370 (430)
T 2iyf_A 324 AVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEV 370 (430)
T ss_dssp ECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCHHH
T ss_pred ECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCHHH
Confidence 99999999999999999999999987788999999999999988754
No 19
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.86 E-value=5.9e-22 Score=142.70 Aligned_cols=115 Identities=21% Similarity=0.358 Sum_probs=100.5
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCC---CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeec
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDS---IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVP 79 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P 79 (124)
.+.+.++++++.+.+++++|++|+.. ....++|+++.+|+|+.+++ +.||++|+|||.+|++||+++|+|+|++|
T Consensus 249 ~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll--~~ad~~v~~~G~~t~~Eal~~G~P~v~~p 326 (398)
T 3oti_A 249 IGAVEPIIAAAGEVDADFVLALGDLDISPLGTLPRNVRAVGWTPLHTLL--RTCTAVVHHGGGGTVMTAIDAGIPQLLAP 326 (398)
T ss_dssp GGGHHHHHHHHHTSSSEEEEECTTSCCGGGCSCCTTEEEESSCCHHHHH--TTCSEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCcChhhhccCCCcEEEEccCCHHHHH--hhCCEEEECCCHHHHHHHHHhCCCEEEcC
Confidence 35678889999988999999998864 23467899999999999999 67999999999999999999999999999
Q ss_pred ccccHHHHH--HHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 80 FYGDQLSHV--RHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 80 ~~~~q~~~a--~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
...||..|+ +++++.|+|+.+..++.+.+.+. ++++|+++
T Consensus 327 ~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~~~~ 368 (398)
T 3oti_A 327 DPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGDESL 368 (398)
T ss_dssp CTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHCHHH
T ss_pred CCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcCHHH
Confidence 999999999 99999999999987777777776 66666654
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.85 E-value=6.6e-21 Score=137.20 Aligned_cols=119 Identities=25% Similarity=0.460 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 3 DGMRTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
.+.+.++++++.+.+.+++|++|+.. ..+.++++.+.+|++..+++ +.||++|+|||++|++||+++|+|+|++
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l--~~ad~~v~~~g~~t~~Ea~a~G~P~v~~ 334 (412)
T 3otg_A 257 VEVLRAAIDGLAGLDADVLVASGPSLDVSGLGEVPANVRLESWVPQAALL--PHVDLVVHHGGSGTTLGALGAGVPQLSF 334 (412)
T ss_dssp HHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCCCCTTEEEESCCCHHHHG--GGCSEEEESCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCCCChhhhccCCCcEEEeCCCCHHHHH--hcCcEEEECCchHHHHHHHHhCCCEEec
Confidence 46778888999888999999998754 23457899999999999988 7799999999999999999999999999
Q ss_pred cccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 79 PFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
|...||..|++.+++.|.|..+.+++++.++|.+++.++++|+++
T Consensus 335 p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~~~~ 379 (412)
T 3otg_A 335 PWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESY 379 (412)
T ss_dssp CCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHCHHH
T ss_pred CCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999988788999999999999988754
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.80 E-value=8.3e-20 Score=130.93 Aligned_cols=114 Identities=20% Similarity=0.233 Sum_probs=94.8
Q ss_pred HHHHHHHhhC----CCeEEEEEcCCCC-------CCCCCcEEEeeccChHH-hhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 7 TLLVTAFSRT----GLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQD-VLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 7 ~~~~~~l~~~----~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
+.+.+++... +..++|++|+... .+.+.++.+.+|++++. ++ +.||++||++|++|++|++++|+|
T Consensus 197 ~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~~dm~~~l--~~aDlvI~raG~~Tv~E~~a~G~P 274 (365)
T 3s2u_A 197 KLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAY--AWADLVICRAGALTVSELTAAGLP 274 (365)
T ss_dssp HHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHHTTCCCEEESCCSCHHHHH--HHCSEEEECCCHHHHHHHHHHTCC
T ss_pred hhhHHHHHhcccccceEEEEecCccccccccceecccccccccccchhhhhhhh--ccceEEEecCCcchHHHHHHhCCC
Confidence 3445555543 4688889987642 23566889999998765 55 789999999999999999999999
Q ss_pred eeeeccc----ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 75 IIGVPFY----GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 75 ~l~~P~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+|++|.. .+|..||+.+++.|+|.++..++++.++|.++|.++++||+
T Consensus 275 ~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d~~ 326 (365)
T 3s2u_A 275 AFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPE 326 (365)
T ss_dssp EEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHCTH
T ss_pred eEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCCHH
Confidence 9999874 58999999999999999999889999999999999999885
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.76 E-value=1.4e-18 Score=117.18 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=80.0
Q ss_pred HHHHhhCC-CeEEEEEcCCCC---CC----C---------C-------------------CcEEEeeccChH-HhhcCC-
Q psy10186 10 VTAFSRTG-LTVLWRYEGDSI---EN----L---------P-------------------GNVHIRKWIPQQ-DVLAHP- 51 (124)
Q Consensus 10 ~~~l~~~~-~~~i~~~g~~~~---~~----~---------~-------------------~~v~~~~~~~~~-~~l~~~- 51 (124)
+++|.+.+ .++++++|+... .. . | -++.+.+|++.+ +++ +
T Consensus 54 l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l--~~ 131 (224)
T 2jzc_A 54 CQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSII--RD 131 (224)
T ss_dssp HHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHH--HH
T ss_pred HHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccccccccccCCceEEEeeccchHHHHH--Hh
Confidence 37777777 799999998653 11 0 1 145677887776 566 8
Q ss_pred CcceEEecCChhhHHHHHHhCCCeeeeccc----ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPIIGVPFY----GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~----~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~l 117 (124)
.||++|||||+||++|++++|+|+|++|.. .+|..||+++++.|+++.+. .++|.++|+++
T Consensus 132 ~AdlvIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~~-----~~~L~~~i~~l 196 (224)
T 2jzc_A 132 YSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCA-----PTETGLIAGLR 196 (224)
T ss_dssp HCSCEEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEEC-----SCTTTHHHHHH
T ss_pred cCCEEEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEcC-----HHHHHHHHHHH
Confidence 899999999999999999999999999984 46999999999999998773 45566666665
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.54 E-value=3.2e-14 Score=98.99 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=76.4
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCC--------CCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIE--------NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPII 76 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l 76 (124)
....+++++.+.+ ++.+++|+.... ...+|+.+..|++.+..++ ..||++||+|| +|++|++++|+|+|
T Consensus 172 l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m-~~aDlvI~~gG-~T~~E~~~~g~P~i 248 (282)
T 3hbm_A 172 LSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLM-NESNKLIISAS-SLVNEALLLKANFK 248 (282)
T ss_dssp HHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHH-HTEEEEEEESS-HHHHHHHHTTCCEE
T ss_pred HHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHH-HHCCEEEECCc-HHHHHHHHcCCCEE
Confidence 4556777776544 577777775421 1235899999998776444 89999999998 79999999999999
Q ss_pred eecccccHHHHHHHHHHcCceeEec
Q psy10186 77 GVPFYGDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 77 ~~P~~~~q~~~a~~~~~~g~g~~~~ 101 (124)
++|...+|..||+.+++.|++..+.
T Consensus 249 ~ip~~~~Q~~nA~~l~~~G~~~~~~ 273 (282)
T 3hbm_A 249 AICYVKNQESTATWLAKKGYEVEYK 273 (282)
T ss_dssp EECCSGGGHHHHHHHHHTTCEEECG
T ss_pred EEeCCCCHHHHHHHHHHCCCEEEcc
Confidence 9999999999999999999999886
No 24
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.47 E-value=4.9e-14 Score=99.74 Aligned_cols=110 Identities=13% Similarity=0.167 Sum_probs=87.9
Q ss_pred HHHHHHHHhhC--CCeEEEEEcCCCCC-------CC-CCcEEEeeccC-hHHhhcCCCcceEEecCChhhHHHHHHhCCC
Q psy10186 6 RTLLVTAFSRT--GLTVLWRYEGDSIE-------NL-PGNVHIRKWIP-QQDVLAHPNCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 6 ~~~~~~~l~~~--~~~~i~~~g~~~~~-------~~-~~~v~~~~~~~-~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
...+++++..+ +.++++++|..... +. .+++.+.+|++ ..+++ ..+|++|+++|.++++||+++|+|
T Consensus 199 ~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~~~~~~v~~~g~~~~~~~~~--~~ad~~v~~sg~~~~~EAma~G~P 276 (364)
T 1f0k_A 199 NQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAY--AWADVVVCRSGALTVSEIAAAGLP 276 (364)
T ss_dssp HHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHH--HHCSEEEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhhcCCCceEEecchhhHHHHH--HhCCEEEECCchHHHHHHHHhCCC
Confidence 34444555443 57878888875421 11 25899999994 45566 789999999999999999999999
Q ss_pred eeeeccc---ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHH
Q psy10186 75 IIGVPFY---GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 75 ~l~~P~~---~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~l 117 (124)
+|+.|.. .+|..|+..+.+.|.|..+.+++.+.+++.+++.++
T Consensus 277 vi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 277 ALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp EEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC
T ss_pred EEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc
Confidence 9999887 789999999999999999987777799999999877
No 25
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.00 E-value=2.4e-09 Score=68.97 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=81.4
Q ss_pred HHHHHHHHHHhhC-CCeEEEEEcCCCCC-----------CCCCcEEEeeccChHH---hhcCCCcceEEecC---C-hhh
Q psy10186 4 GMRTLLVTAFSRT-GLTVLWRYEGDSIE-----------NLPGNVHIRKWIPQQD---VLAHPNCRLFISHG---G-VNS 64 (124)
Q Consensus 4 ~~~~~~~~~l~~~-~~~~i~~~g~~~~~-----------~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~g---G-~~t 64 (124)
+-+..+++++... +++++++.++.... ..++++.+.++++..+ ++ ..+|++|... | ..+
T Consensus 36 Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~--~~adi~v~ps~~e~~~~~ 113 (177)
T 2f9f_A 36 KRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLY--SRCKGLLCTAKDEDFGLT 113 (177)
T ss_dssp GTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHH--HHCSEEEECCSSCCSCHH
T ss_pred cCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHH--HhCCEEEeCCCcCCCChH
Confidence 3456677777777 56776665443311 1356999999999744 44 7899998732 3 458
Q ss_pred HHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 65 ALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
++||+++|+|+|+. +.....+.+.+.+.|..+ . .+.+++.++|.++++++.+
T Consensus 114 ~~Eama~G~PvI~~----~~~~~~e~i~~~~~g~~~-~--~d~~~l~~~i~~l~~~~~~ 165 (177)
T 2f9f_A 114 PIEAMASGKPVIAV----NEGGFKETVINEKTGYLV-N--ADVNEIIDAMKKVSKNPDK 165 (177)
T ss_dssp HHHHHHTTCCEEEE----SSHHHHHHCCBTTTEEEE-C--SCHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHcCCcEEEe----CCCCHHHHhcCCCccEEe-C--CCHHHHHHHHHHHHhCHHH
Confidence 99999999999996 445666667667788877 2 3799999999999988865
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.74 E-value=4.5e-08 Score=69.43 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=68.9
Q ss_pred CCeEEEEEcCCC-C-------CCCCCcEEEeeccChH---HhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHH
Q psy10186 17 GLTVLWRYEGDS-I-------ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQL 85 (124)
Q Consensus 17 ~~~~i~~~g~~~-~-------~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~ 85 (124)
+.++++..|.+. . ....+++.+.++++.. +++ ..||++|+++| |.++||+++|+|+|+.+...++.
T Consensus 230 ~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~--~~ad~~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~ 306 (376)
T 1v4v_A 230 HLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALM--RASLLLVTDSG-GLQEEGAALGVPVVVLRNVTERP 306 (376)
T ss_dssp TSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH--HTEEEEEESCH-HHHHHHHHTTCCEEECSSSCSCH
T ss_pred CeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHH--HhCcEEEECCc-CHHHHHHHcCCCEEeccCCCcch
Confidence 467777666432 0 0123589999666553 566 78999999984 45779999999999987655544
Q ss_pred HHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 86 SHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 86 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
. +.+.|.|..+. .+.+++.+++.++++|+.
T Consensus 307 ~----~~~~g~g~lv~---~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 307 E----GLKAGILKLAG---TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp H----HHHHTSEEECC---SCHHHHHHHHHHHHTCHH
T ss_pred h----hhcCCceEECC---CCHHHHHHHHHHHHhChH
Confidence 4 24567888774 289999999999998763
No 27
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.72 E-value=2.2e-08 Score=71.01 Aligned_cols=96 Identities=13% Similarity=0.099 Sum_probs=69.0
Q ss_pred CCeEEEEEcCCC-C-------CCCCCcEEEeeccChH---HhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHH
Q psy10186 17 GLTVLWRYEGDS-I-------ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQL 85 (124)
Q Consensus 17 ~~~~i~~~g~~~-~-------~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~ 85 (124)
++++++..|.+. . .+..+++.+.++++.. +++ ..||++|+++|. +++||+++|+|+|+.+..+...
T Consensus 238 ~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~--~~ad~~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~ 314 (384)
T 1vgv_A 238 DIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM--NHAWLILTDSGG-IQEEAPSLGKPVLVMRDTTERP 314 (384)
T ss_dssp TEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH--HHCSEEEESSST-GGGTGGGGTCCEEEESSCCSCH
T ss_pred CeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH--HhCcEEEECCcc-hHHHHHHcCCCEEEccCCCCcc
Confidence 467777656431 0 0123689997776653 345 789999999865 5889999999999987643322
Q ss_pred HHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 86 SHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 86 ~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+.+.|.|..+.+ +.+++.+++.++++|+.
T Consensus 315 ----e~v~~g~g~lv~~---d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 315 ----EAVTAGTVRLVGT---DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp ----HHHHHTSEEEECS---SHHHHHHHHHHHHHCHH
T ss_pred ----hhhhCCceEEeCC---CHHHHHHHHHHHHhChH
Confidence 2345578888864 79999999999998763
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.72 E-value=9.8e-09 Score=74.20 Aligned_cols=107 Identities=15% Similarity=0.162 Sum_probs=74.7
Q ss_pred HHHHHHHHhhC-----CCeEEEEEcCCC-----C---CCCCCcEEEeeccChH---HhhcCCCcceEEecCChhhHHHHH
Q psy10186 6 RTLLVTAFSRT-----GLTVLWRYEGDS-----I---ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 6 ~~~~~~~l~~~-----~~~~i~~~g~~~-----~---~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG~~t~~ea~ 69 (124)
+..+++++..+ +.++++.+|.+. . ....+++.+.+++++. .++ ..||++|+.+| |...||+
T Consensus 247 ~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~--~~ad~vv~~SG-g~~~EA~ 323 (396)
T 3dzc_A 247 FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLM--DRAHIILTDSG-GIQEEAP 323 (396)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHH--HHCSEEEESCS-GGGTTGG
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHH--HhcCEEEECCc-cHHHHHH
Confidence 45556655432 468887776432 0 1234689998887643 344 78999999998 5558999
Q ss_pred HhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
++|+|+|+.....++. .+.+.|.++.+.. +.++|.+++.++++|+.
T Consensus 324 a~G~PvV~~~~~~~~~----e~v~~G~~~lv~~---d~~~l~~ai~~ll~d~~ 369 (396)
T 3dzc_A 324 SLGKPVLVMRETTERP----EAVAAGTVKLVGT---NQQQICDALSLLLTDPQ 369 (396)
T ss_dssp GGTCCEEECCSSCSCH----HHHHHTSEEECTT---CHHHHHHHHHHHHHCHH
T ss_pred HcCCCEEEccCCCcch----HHHHcCceEEcCC---CHHHHHHHHHHHHcCHH
Confidence 9999999975555543 2355677776652 68999999999998764
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.70 E-value=2.6e-08 Score=72.20 Aligned_cols=107 Identities=12% Similarity=0.122 Sum_probs=75.5
Q ss_pred HHHHHHHHhh----C-CCeEEEEEcCCC-C-------CCCCCcEEEeeccChH---HhhcCCCcceEEecCChhhHHHHH
Q psy10186 6 RTLLVTAFSR----T-GLTVLWRYEGDS-I-------ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGGVNSALEAI 69 (124)
Q Consensus 6 ~~~~~~~l~~----~-~~~~i~~~g~~~-~-------~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG~~t~~ea~ 69 (124)
+..+++++.. . +.++++.++++. . ....+++.+.+++++. .++ ..||++|+.+|..+ .||+
T Consensus 241 l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~--~~ad~vv~~SGg~~-~EA~ 317 (403)
T 3ot5_A 241 MQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFL--RKSYLVFTDSGGVQ-EEAP 317 (403)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH--HHEEEEEECCHHHH-HHGG
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHH--HhcCEEEECCccHH-HHHH
Confidence 3455555432 2 468888776542 0 1234689999988743 345 78999999986544 8999
Q ss_pred HhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 70 HYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
++|+|+|+.|...++.. +.+.|.++.+.. +.+++.+++.++++++.
T Consensus 318 a~g~PvV~~~~~~~~~e----~v~~g~~~lv~~---d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERPE----GIEAGTLKLIGT---NKENLIKEALDLLDNKE 363 (403)
T ss_dssp GTTCCEEECCSSCSCHH----HHHHTSEEECCS---CHHHHHHHHHHHHHCHH
T ss_pred HhCCCEEEecCCCcchh----heeCCcEEEcCC---CHHHHHHHHHHHHcCHH
Confidence 99999999976555433 246788887753 79999999999997753
No 30
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.67 E-value=8e-08 Score=69.34 Aligned_cols=109 Identities=11% Similarity=0.138 Sum_probs=77.2
Q ss_pred HHHHHHHHHHhhC----CCeEEEEEcCCC------C---CCCCCcEEEeeccChH---HhhcCCCcceEEecCChhhHHH
Q psy10186 4 GMRTLLVTAFSRT----GLTVLWRYEGDS------I---ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGGVNSALE 67 (124)
Q Consensus 4 ~~~~~~~~~l~~~----~~~~i~~~g~~~------~---~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG~~t~~e 67 (124)
+.+..+++++.++ +..+++..++.. . ....+++++.+.+++. .++ ..||++|+.+|. ...|
T Consensus 220 ~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~--~~adlvvt~SGg-v~~E 296 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQ--MNAFCILSDSGT-ITEE 296 (385)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHH--HHCSEEEECCTT-HHHH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHH--HhCcEEEECCcc-HHHH
Confidence 3456666666543 678888765421 1 1123588887766644 455 789999999987 4699
Q ss_pred HHHhCCCeeeeccccc-HHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 68 AIHYGIPIIGVPFYGD-QLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 68 a~~~g~P~l~~P~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
|.++|+|+|.++...+ |. ..+.|.++.+.. +.+++.+++.++++|+..
T Consensus 297 A~alG~Pvv~~~~~ter~e-----~v~~G~~~lv~~---d~~~i~~ai~~ll~d~~~ 345 (385)
T 4hwg_A 297 ASILNLPALNIREAHERPE-----GMDAGTLIMSGF---KAERVLQAVKTITEEHDN 345 (385)
T ss_dssp HHHTTCCEEECSSSCSCTH-----HHHHTCCEECCS---SHHHHHHHHHHHHTTCBT
T ss_pred HHHcCCCEEEcCCCccchh-----hhhcCceEEcCC---CHHHHHHHHHHHHhChHH
Confidence 9999999999977554 33 245687777742 799999999999988753
No 31
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.63 E-value=9.5e-08 Score=67.50 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=60.2
Q ss_pred CcEEEeeccChHHhhcC-CCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy10186 34 GNVHIRKWIPQQDVLAH-PNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAW 112 (124)
Q Consensus 34 ~~v~~~~~~~~~~~l~~-~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ 112 (124)
+++.+.++++..++... ..+|++|+.+| ++++||+++|+|+|..+..... ..+.+.|.|..+.+ +.+++.+
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~g~g~~v~~---d~~~la~ 334 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYLMLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEAGTLKLAGT---DEETIFS 334 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSEEEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHTTSEEECCS---CHHHHHH
T ss_pred CCEEEeCCCCHHHHHHHHHhCcEEEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecCCceEEcCC---CHHHHHH
Confidence 68999887775542222 78999999884 5689999999999988543332 22345578888753 7899999
Q ss_pred HHHHHhcCCC
Q psy10186 113 ATSIVLNNPR 122 (124)
Q Consensus 113 ~l~~ll~~~~ 122 (124)
++.++++|+.
T Consensus 335 ~i~~ll~~~~ 344 (375)
T 3beo_A 335 LADELLSDKE 344 (375)
T ss_dssp HHHHHHHCHH
T ss_pred HHHHHHhChH
Confidence 9999998764
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.58 E-value=4.6e-08 Score=69.62 Aligned_cols=82 Identities=15% Similarity=0.156 Sum_probs=65.4
Q ss_pred CCcEEEeeccChH---HhhcCCCcceEEecCC-----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 33 PGNVHIRKWIPQQ---DVLAHPNCRLFISHGG-----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 33 ~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG-----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
.+++.+.++++.. +++ ..+|++|..+. ..+++||+++|+|+|+. +.....+.+.+...|..+.+
T Consensus 262 ~~~v~~~g~~~~~~~~~~~--~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~~~~g~~~~~-- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAM--RSADVYCAPHLGGESFGIVLVEAMAAGTAVVAS----DLDAFRRVLADGDAGRLVPV-- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHH--HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEEC----CCHHHHHHHTTTTSSEECCT--
T ss_pred cCcEEEEecCCHHHHHHHH--HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEe----cCCcHHHHhcCCCceEEeCC--
Confidence 5789999999976 344 78999987653 46899999999999996 44667777777778888853
Q ss_pred CCHHHHHHHHHHHhcCCC
Q psy10186 105 ITLESIAWATSIVLNNPR 122 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~~~ 122 (124)
-+.+++.++|.++++++.
T Consensus 334 ~d~~~l~~~i~~l~~~~~ 351 (406)
T 2gek_A 334 DDADGMAAALIGILEDDQ 351 (406)
T ss_dssp TCHHHHHHHHHHHHHCHH
T ss_pred CCHHHHHHHHHHHHcCHH
Confidence 268999999999998764
No 33
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.51 E-value=2.3e-06 Score=61.27 Aligned_cols=84 Identities=20% Similarity=0.292 Sum_probs=62.6
Q ss_pred CcEEEeeccCh-HHhhcCCCcceEEec-----CChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 34 GNVHIRKWIPQ-QDVLAHPNCRLFISH-----GGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 34 ~~v~~~~~~~~-~~~l~~~~~d~~i~~-----gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
.++.+.++... ..++ ..+|+++.. +|..+++||+++|+|+|.-|...+.......+.+.|.++... +.
T Consensus 260 ~~v~~~~~~~dl~~~y--~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~----d~ 333 (374)
T 2xci_A 260 GDVILVDRFGILKELY--PVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGFEVK----NE 333 (374)
T ss_dssp SSEEECCSSSCHHHHG--GGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEEECC----SH
T ss_pred CcEEEECCHHHHHHHH--HhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEEEeC----CH
Confidence 35676665544 4455 789996542 245789999999999998777666666666666678777765 78
Q ss_pred HHHHHHHHHHhcCCCCC
Q psy10186 108 ESIAWATSIVLNNPRRY 124 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~~r 124 (124)
+++.+++.++++| ..|
T Consensus 334 ~~La~ai~~ll~d-~~r 349 (374)
T 2xci_A 334 TELVTKLTELLSV-KKE 349 (374)
T ss_dssp HHHHHHHHHHHHS-CCC
T ss_pred HHHHHHHHHHHhH-HHH
Confidence 9999999999988 653
No 34
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.47 E-value=1.3e-07 Score=67.00 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=68.5
Q ss_pred CCeEEEEEcCCC-------CCCCCCcEEEeeccChHHhhcC-CCcceEEe-----------cCChhhHHHHHHhCCCeee
Q psy10186 17 GLTVLWRYEGDS-------IENLPGNVHIRKWIPQQDVLAH-PNCRLFIS-----------HGGVNSALEAIHYGIPIIG 77 (124)
Q Consensus 17 ~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~-----------~gG~~t~~ea~~~g~P~l~ 77 (124)
+++++++.++.. .....+++.+.++++..++... ..+|++|. -|...+++||+++|+|+|+
T Consensus 229 ~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 229 DAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIA 308 (394)
T ss_dssp TCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEE
T ss_pred CeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEE
Confidence 467766543332 1123478999999986664322 78999987 5556789999999999999
Q ss_pred ecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 78 VPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 78 ~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+.. ...+.+.+ |.|..+.+ -+.+++.+++.++++++.
T Consensus 309 ~~~~----~~~e~i~~-~~g~~~~~--~d~~~l~~~i~~l~~~~~ 346 (394)
T 3okp_A 309 GTSG----GAPETVTP-ATGLVVEG--SDVDKLSELLIELLDDPI 346 (394)
T ss_dssp CSST----TGGGGCCT-TTEEECCT--TCHHHHHHHHHHHHTCHH
T ss_pred eCCC----ChHHHHhc-CCceEeCC--CCHHHHHHHHHHHHhCHH
Confidence 6543 22233333 37777753 368999999999998754
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.46 E-value=1.7e-07 Score=65.99 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=76.7
Q ss_pred HHHHHHHHHhhC------CCeEEEEEcCCCCC---------CCCCcEEEeeccCh-HHhhcCCCcceEEec----CChhh
Q psy10186 5 MRTLLVTAFSRT------GLTVLWRYEGDSIE---------NLPGNVHIRKWIPQ-QDVLAHPNCRLFISH----GGVNS 64 (124)
Q Consensus 5 ~~~~~~~~l~~~------~~~~i~~~g~~~~~---------~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~----gG~~t 64 (124)
-+..+++++... +++++ ++|..... ...+++.+.++... .+++ ..+|++|.. |...+
T Consensus 210 ~~~~li~a~~~l~~~~~~~~~l~-i~G~g~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~--~~ad~~v~ps~~e~~~~~ 286 (374)
T 2iw1_A 210 GVDRSIEALASLPESLRHNTLLF-VVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM--AAADLLLHPAYQEAAGIV 286 (374)
T ss_dssp THHHHHHHHHTSCHHHHHTEEEE-EESSSCCHHHHHHHHHHTCGGGEEEESCCSCHHHHH--HHCSEEEECCSCCSSCHH
T ss_pred CHHHHHHHHHHhHhccCCceEEE-EEcCCCHHHHHHHHHHcCCCCcEEECCCcccHHHHH--HhcCEEEeccccCCcccH
Confidence 345566666654 34554 44443211 13578999998654 4455 789999874 35678
Q ss_pred HHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 65 ALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
++||+++|+|+|+.+. ..+.+.+++.+.|..+.. ..+.+++.+++.++++++.
T Consensus 287 ~~Ea~a~G~Pvi~~~~----~~~~e~i~~~~~g~~~~~-~~~~~~l~~~i~~l~~~~~ 339 (374)
T 2iw1_A 287 LLEAITAGLPVLTTAV----CGYAHYIADANCGTVIAE-PFSQEQLNEVLRKALTQSP 339 (374)
T ss_dssp HHHHHHHTCCEEEETT----STTTHHHHHHTCEEEECS-SCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHCCCCEEEecC----CCchhhhccCCceEEeCC-CCCHHHHHHHHHHHHcChH
Confidence 9999999999999744 345567777789988862 2368999999999998764
No 36
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.42 E-value=8.6e-07 Score=63.58 Aligned_cols=81 Identities=16% Similarity=0.113 Sum_probs=63.7
Q ss_pred CCCcEEEeeccC---hH---HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEec
Q psy10186 32 LPGNVHIRKWIP---QQ---DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 32 ~~~~v~~~~~~~---~~---~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~ 101 (124)
..+++.+.++++ +. +++ ..+|++|..+ ...+++||+++|+|+|.. +...+.+.+.+.+.|..+.
T Consensus 291 ~~~~V~~~G~~~~~~~~~~~~~~--~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~----~~~g~~e~i~~~~~g~l~~ 364 (416)
T 2x6q_A 291 EDYDVKVLTNLIGVHAREVNAFQ--RASDVILQMSIREGFGLTVTEAMWKGKPVIGR----AVGGIKFQIVDGETGFLVR 364 (416)
T ss_dssp TCTTEEEEEGGGTCCHHHHHHHH--HHCSEEEECCSSCSSCHHHHHHHHTTCCEEEE----SCHHHHHHCCBTTTEEEES
T ss_pred CCCcEEEecccCCCCHHHHHHHH--HhCCEEEECCCcCCCccHHHHHHHcCCCEEEc----cCCCChhheecCCCeEEEC
Confidence 457899999775 33 344 7899998876 356899999999999996 4456677777777888886
Q ss_pred CCCCCHHHHHHHHHHHhcCCC
Q psy10186 102 YFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 102 ~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+.+++.++|.++++++.
T Consensus 365 ----d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 365 ----DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp ----SHHHHHHHHHHHHHCHH
T ss_pred ----CHHHHHHHHHHHHhCHH
Confidence 78999999999998764
No 37
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.41 E-value=3.2e-07 Score=59.51 Aligned_cols=81 Identities=19% Similarity=0.056 Sum_probs=61.6
Q ss_pred cEEE-eeccChHHhhcC-CCcceEEecCC----hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 35 NVHI-RKWIPQQDVLAH-PNCRLFISHGG----VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 35 ~v~~-~~~~~~~~~l~~-~~~d~~i~~gG----~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
++.+ .++++..++... ..+|++|...- ..+++||+++|+|+|+. +.....+.+ +.+.|..+.+ .+.+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~~-~~~~g~~~~~--~~~~ 168 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS----AVGGLRDII-TNETGILVKA--GDPG 168 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEE----SCHHHHHHC-CTTTCEEECT--TCHH
T ss_pred CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCEEEe----CCCChHHHc-CCCceEEecC--CCHH
Confidence 8999 999986543222 88999997652 46899999999999986 444566666 6677887753 3689
Q ss_pred HHHHHHHHHhc-CCC
Q psy10186 109 SIAWATSIVLN-NPR 122 (124)
Q Consensus 109 ~l~~~l~~ll~-~~~ 122 (124)
++.+++.++++ ++.
T Consensus 169 ~l~~~i~~l~~~~~~ 183 (200)
T 2bfw_A 169 ELANAILKALELSRS 183 (200)
T ss_dssp HHHHHHHHHHHCCHH
T ss_pred HHHHHHHHHHhcCHH
Confidence 99999999988 754
No 38
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.41 E-value=3.3e-07 Score=66.02 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=64.2
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
..+++.+.++++..++... ..+|++|... ...+++||+++|+|+|+.+ .....+.+.+.+.|..+.+ .+
T Consensus 304 l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~~~g~~~~~--~d 377 (438)
T 3c48_A 304 VEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAAR----VGGLPIAVAEGETGLLVDG--HS 377 (438)
T ss_dssp CTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEES----CTTHHHHSCBTTTEEEESS--CC
T ss_pred CCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecC----CCChhHHhhCCCcEEECCC--CC
Confidence 4578999999987543222 7899998775 2468999999999999964 3345556666678888863 36
Q ss_pred HHHHHHHHHHHhcCCC
Q psy10186 107 LESIAWATSIVLNNPR 122 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~~ 122 (124)
.+++.++|.++++++.
T Consensus 378 ~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 378 PHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHcCHH
Confidence 8999999999998764
No 39
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.34 E-value=2.1e-06 Score=63.98 Aligned_cols=86 Identities=15% Similarity=0.136 Sum_probs=62.2
Q ss_pred CcEEEeeccChHHhhcC-CCcceEEec---CChhhHHHHHHhCCCeeeeccccc-HHHHHHHHHHcCceeEecCCCCCHH
Q psy10186 34 GNVHIRKWIPQQDVLAH-PNCRLFISH---GGVNSALEAIHYGIPIIGVPFYGD-QLSHVRHIVDLGAGVELSYFNITLE 108 (124)
Q Consensus 34 ~~v~~~~~~~~~~~l~~-~~~d~~i~~---gG~~t~~ea~~~g~P~l~~P~~~~-q~~~a~~~~~~g~g~~~~~~~~~~~ 108 (124)
++|.+.++++..++... ..+|+++.. |+..+++||+++|+|+|+.|...- -..-+..+...|+...+.. +.+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~~---~~~ 510 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADLFLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNVA---DDA 510 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBCS---SHH
T ss_pred hHEEeeCCCCHHHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhcC---CHH
Confidence 78999999985543221 789999854 456789999999999999764311 1122455666687766653 789
Q ss_pred HHHHHHHHHhcCCC
Q psy10186 109 SIAWATSIVLNNPR 122 (124)
Q Consensus 109 ~l~~~l~~ll~~~~ 122 (124)
++.+++.++++|+.
T Consensus 511 ~la~~i~~l~~~~~ 524 (568)
T 2vsy_A 511 AFVAKAVALASDPA 524 (568)
T ss_dssp HHHHHHHHHHHCHH
T ss_pred HHHHHHHHHhcCHH
Confidence 99999999988764
No 40
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.33 E-value=2.4e-07 Score=64.86 Aligned_cols=106 Identities=9% Similarity=0.013 Sum_probs=74.3
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccChH---HhhcCCCcceEEecCC------------
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQ---DVLAHPNCRLFISHGG------------ 61 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~---~~l~~~~~d~~i~~gG------------ 61 (124)
+-+..+++++...+.+++++..+... ....+++.+.++++.. +++ ..+|++|...-
T Consensus 175 Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~--~~adv~v~ps~~~~~~~~~~~~E 252 (342)
T 2iuy_A 175 KGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLL--ASAHAVLAMSQAVTGPWGGIWCE 252 (342)
T ss_dssp GTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHH--HHCSEEEECCCCCCCTTCSCCCC
T ss_pred cCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHH--HhCCEEEECCccccccccccccc
Confidence 34556677776667787665433321 0123799999999987 344 78999885432
Q ss_pred --hhhHHHHHHhCCCeeeecccccHHHHHHHHHH--cCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 62 --VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVD--LGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 62 --~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~--~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
..+++||+++|+|+|+.. .....+.+++ ...|..+.+ +.+++.++|.+++
T Consensus 253 ~~~~~~~EAma~G~PvI~s~----~~~~~e~~~~~~~~~g~~~~~---d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 253 PGATVVSEAAVSGTPVVGTG----NGCLAEIVPSVGEVVGYGTDF---APDEARRTLAGLP 306 (342)
T ss_dssp CCCHHHHHHHHTTCCEEECC----TTTHHHHGGGGEEECCSSSCC---CHHHHHHHHHTSC
T ss_pred CccHHHHHHHhcCCCEEEcC----CCChHHHhcccCCCceEEcCC---CHHHHHHHHHHHH
Confidence 478999999999999964 3456666776 567777753 7888888888765
No 41
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.27 E-value=2.7e-06 Score=61.74 Aligned_cols=85 Identities=16% Similarity=0.026 Sum_probs=61.1
Q ss_pred CCcEEEeeccChHHhhcC-CCcceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQQDVLAH-PNCRLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~-~~~d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
..++.+.++++..++... ..||+++..+ | ..+++||+++|+|+|.- ..+ ..+.+++...|..+.+ -+.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g----~~e~v~~~~~G~lv~~--~d~ 366 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYE----NKDLSNWHSNIVSLEQ--LNP 366 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBT----TBCGGGTBTTEEEESS--CSH
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCC----cchhhhcCCCEEEeCC--CCH
Confidence 458899999987764333 8899998754 3 35689999999999982 222 1234455567887764 368
Q ss_pred HHHHHHHHHHhcCCCCC
Q psy10186 108 ESIAWATSIVLNNPRRY 124 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~~r 124 (124)
++++++|.++++|+..|
T Consensus 367 ~~la~ai~~ll~~~~~~ 383 (413)
T 2x0d_A 367 ENIAETLVELCMSFNNR 383 (413)
T ss_dssp HHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHcCHHHH
Confidence 99999999999888754
No 42
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.25 E-value=3.7e-06 Score=60.14 Aligned_cols=85 Identities=16% Similarity=-0.015 Sum_probs=62.4
Q ss_pred CCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
.+.++.+.++++..++... ..+|++|... -..+++||+++|+|+|+. +.....+.+. .|.|..+.+ .+
T Consensus 309 ~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s----~~~~~~e~~~-~~~g~~~~~--~d 381 (439)
T 3fro_A 309 HGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIAS----AVGGLRDIIT-NETGILVKA--GD 381 (439)
T ss_dssp CTTEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTCEEEEE----SSTHHHHHCC-TTTCEEECT--TC
T ss_pred cCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCCCeEEc----CCCCcceeEE-cCceEEeCC--CC
Confidence 3456667888998664322 8899998764 347899999999999996 3334445444 358888863 36
Q ss_pred HHHHHHHHHHHhc-CCCC
Q psy10186 107 LESIAWATSIVLN-NPRR 123 (124)
Q Consensus 107 ~~~l~~~l~~ll~-~~~~ 123 (124)
.+++.+++.++++ +++.
T Consensus 382 ~~~la~~i~~ll~~~~~~ 399 (439)
T 3fro_A 382 PGELANAILKALELSRSD 399 (439)
T ss_dssp HHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHhcCHHH
Confidence 8999999999998 7764
No 43
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.21 E-value=1.9e-06 Score=63.39 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=64.7
Q ss_pred CCCcEEEeeccChHHhhcC-CCc----ceEEecC---C-hhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC
Q psy10186 32 LPGNVHIRKWIPQQDVLAH-PNC----RLFISHG---G-VNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY 102 (124)
Q Consensus 32 ~~~~v~~~~~~~~~~~l~~-~~~----d~~i~~g---G-~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~ 102 (124)
..+++.+.++++..++... ..+ |++|..+ | ..+++||+++|+|+|+. +.....+.+.+...|..+.+
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s----~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVT----RNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEE----SSBHHHHHTGGGTSSEEECT
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEe----cCCCHHHHhcCCceEEEeCC
Confidence 3568999999986653322 789 9998665 2 46899999999999996 33455666666668888863
Q ss_pred CCCCHHHHHHHHHHHhcCCC
Q psy10186 103 FNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 103 ~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+.+++.++|.++++++.
T Consensus 409 --~d~~~la~~i~~ll~~~~ 426 (499)
T 2r60_A 409 --EDPEDIARGLLKAFESEE 426 (499)
T ss_dssp --TCHHHHHHHHHHHHSCHH
T ss_pred --CCHHHHHHHHHHHHhCHH
Confidence 368999999999998764
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.20 E-value=1.2e-06 Score=62.62 Aligned_cols=80 Identities=11% Similarity=0.078 Sum_probs=57.7
Q ss_pred EEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCc--------------
Q psy10186 36 VHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGA-------------- 96 (124)
Q Consensus 36 v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~-------------- 96 (124)
+.+.++++..++... ..+|+++..+ ...+++||+++|+|+|.. +.....+.+.+...
T Consensus 256 v~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s----~~~g~~e~v~~~~~~~i~~~~~~~~~~~ 331 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIIS----AVGGADDYFSGDCVYKIKPSAWISVDDR 331 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEE----CCHHHHHHSCTTTSEEECCCEEEECTTT
T ss_pred eeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEc----CCCChHHHHccCcccccccccccccccc
Confidence 778899996554322 7899998654 246899999999999995 44455565554333
Q ss_pred -ee--EecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 97 -GV--ELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 97 -g~--~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
|. .+.+. +.+++.+++ ++++++.
T Consensus 332 ~G~~gl~~~~--d~~~la~~i-~l~~~~~ 357 (413)
T 3oy2_A 332 DGIGGIEGII--DVDDLVEAF-TFFKDEK 357 (413)
T ss_dssp CSSCCEEEEC--CHHHHHHHH-HHTTSHH
T ss_pred cCcceeeCCC--CHHHHHHHH-HHhcCHH
Confidence 55 55432 799999999 9988764
No 45
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.18 E-value=1e-06 Score=62.75 Aligned_cols=82 Identities=17% Similarity=0.088 Sum_probs=59.7
Q ss_pred CCcEEEeeccCh-HHhhcCCCcceEEe----cCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCH
Q psy10186 33 PGNVHIRKWIPQ-QDVLAHPNCRLFIS----HGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITL 107 (124)
Q Consensus 33 ~~~v~~~~~~~~-~~~l~~~~~d~~i~----~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~ 107 (124)
.+++.+.++... .+++ ..+|++|. -|...+++||+++|+|+|+.+.. ...+.+.+.+.|..+.+ -+.
T Consensus 266 ~~~v~~~g~~~~~~~~~--~~adv~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~~~g~~~~~--~d~ 337 (394)
T 2jjm_A 266 EDRVLFLGKQDNVAELL--AMSDLMLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHGDTGYLCEV--GDT 337 (394)
T ss_dssp GGGBCCCBSCSCTHHHH--HTCSEEEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBTTTEEEECT--TCH
T ss_pred CCeEEEeCchhhHHHHH--HhCCEEEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcCCceEEeCC--CCH
Confidence 468888887543 4556 78999994 34567899999999999997543 23334444567887753 268
Q ss_pred HHHHHHHHHHhcCCC
Q psy10186 108 ESIAWATSIVLNNPR 122 (124)
Q Consensus 108 ~~l~~~l~~ll~~~~ 122 (124)
+++.+++.++++++.
T Consensus 338 ~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 338 TGVADQAIQLLKDEE 352 (394)
T ss_dssp HHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHcCHH
Confidence 999999999988764
No 46
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.18 E-value=3e-07 Score=58.02 Aligned_cols=110 Identities=17% Similarity=0.287 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhC----CCeEEEEEcCCCC-------CCCCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHH
Q psy10186 5 MRTLLVTAFSRT----GLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEA 68 (124)
Q Consensus 5 ~~~~~~~~l~~~----~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea 68 (124)
-+..+++++..+ +++++++..+... .+.+.++.+ ++++..++... ..+|++|... ...+++||
T Consensus 16 g~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Ea 94 (166)
T 3qhp_A 16 NQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEA 94 (166)
T ss_dssp THHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHH
T ss_pred CHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHH
Confidence 345566666654 3455444332221 112337888 99987653322 8999998754 34689999
Q ss_pred HHhCC-CeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 69 IHYGI-PIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 69 ~~~g~-P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+++|+ |+|.....+. ..+.+.+.+. .+. .-+.+++.+++.++++++.
T Consensus 95 ma~G~vPvi~~~~~~~---~~~~~~~~~~--~~~--~~~~~~l~~~i~~l~~~~~ 142 (166)
T 3qhp_A 95 ISVGIVPVIANSPLSA---TRQFALDERS--LFE--PNNAKDLSAKIDWWLENKL 142 (166)
T ss_dssp HHTTCCEEEECCTTCG---GGGGCSSGGG--EEC--TTCHHHHHHHHHHHHHCHH
T ss_pred HhcCCCcEEeeCCCCc---hhhhccCCce--EEc--CCCHHHHHHHHHHHHhCHH
Confidence 99997 9999322111 1111122222 332 2379999999999988764
No 47
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.04 E-value=3e-05 Score=59.08 Aligned_cols=118 Identities=14% Similarity=0.150 Sum_probs=80.7
Q ss_pred CHHHHHHHHHHHhhCCCeEEEE--EcCCC-CC----------CCCCcEEEeeccChHHhhcC-CCcceEEec---CChhh
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWR--YEGDS-IE----------NLPGNVHIRKWIPQQDVLAH-PNCRLFISH---GGVNS 64 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~--~g~~~-~~----------~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~---gG~~t 64 (124)
+++.+...++.+.+.+..++|. .|.+. .. +..+.+.+.+.+|..+.+.. ..+|+++.. +|..|
T Consensus 454 ~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIfLDpfpy~GgtT 533 (631)
T 3q3e_A 454 NPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMMVNPFPFGNTNG 533 (631)
T ss_dssp CHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEEECCSSSCCSHH
T ss_pred CHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEEEeCCcccCChH
Confidence 4667777788888888777663 45321 11 13357889999987664432 789999876 58899
Q ss_pred HHHHHHhCCCeeeecccc-cHHHHHHHHHHcCcee-EecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 65 ALEAIHYGIPIIGVPFYG-DQLSHVRHIVDLGAGV-ELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P~~~-~q~~~a~~~~~~g~g~-~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+||+.+|+|+|..+-.. ....-+..+...|+.. .+.. +.++..+...++.+|+.
T Consensus 534 tlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LIA~---d~eeYv~~Av~La~D~~ 590 (631)
T 3q3e_A 534 IIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLIAN---TVDEYVERAVRLAENHQ 590 (631)
T ss_dssp HHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGEES---SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcceecC---CHHHHHHHHHHHhCCHH
Confidence 999999999999986432 2233345566778875 2432 67777777777776654
No 48
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.96 E-value=8.5e-05 Score=53.59 Aligned_cols=93 Identities=14% Similarity=0.055 Sum_probs=66.5
Q ss_pred CCeEEEEEcCCCCC--CCCCcEEEeeccChHHhhcC-CCcceEEecC----ChhhHHHHH-------HhCCCeeeecccc
Q psy10186 17 GLTVLWRYEGDSIE--NLPGNVHIRKWIPQQDVLAH-PNCRLFISHG----GVNSALEAI-------HYGIPIIGVPFYG 82 (124)
Q Consensus 17 ~~~~i~~~g~~~~~--~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~g----G~~t~~ea~-------~~g~P~l~~P~~~ 82 (124)
+.+++++ |..... ...+++.+.++++..++... ..+|+++... -..+++||+ ++|+|+|....
T Consensus 247 ~~~l~iv-G~g~~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~-- 323 (406)
T 2hy7_A 247 QVTFHVI-GSGMGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA-- 323 (406)
T ss_dssp TEEEEEE-SCSSCCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG--
T ss_pred CeEEEEE-eCchHHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh--
Confidence 4566555 543222 24678999999987654322 7899988643 346789999 99999999643
Q ss_pred cHHHHHHHHHHcCceeE-ecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 83 DQLSHVRHIVDLGAGVE-LSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 83 ~q~~~a~~~~~~g~g~~-~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
+.+...|.. +.++ +.+++.++|.++++++.
T Consensus 324 --------v~~~~~G~l~v~~~--d~~~la~ai~~ll~~~~ 354 (406)
T 2hy7_A 324 --------VVGPYKSRFGYTPG--NADSVIAAITQALEAPR 354 (406)
T ss_dssp --------GTCSCSSEEEECTT--CHHHHHHHHHHHHHCCC
T ss_pred --------cccCcceEEEeCCC--CHHHHHHHHHHHHhCcc
Confidence 455556777 6532 68999999999998874
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.91 E-value=1.2e-05 Score=58.66 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=67.9
Q ss_pred CCCeEEEEEcCCC---------CCCCCCcEE-EeeccChHH---hhcCCCcceEEecC----ChhhHHHHHHhCCCeeee
Q psy10186 16 TGLTVLWRYEGDS---------IENLPGNVH-IRKWIPQQD---VLAHPNCRLFISHG----GVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 16 ~~~~~i~~~g~~~---------~~~~~~~v~-~~~~~~~~~---~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~ 78 (124)
.+.+++++.++.. ..+.++++. +.++ +... ++ ..+|++|..+ ...+++||+++|+|+|+.
T Consensus 319 ~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~--~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s 395 (485)
T 1rzu_A 319 LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQ--AGCDAIIIPSRFEPCGLTQLYALRYGCIPVVA 395 (485)
T ss_dssp TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHH--HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHH--hcCCEEEECcccCCCCHHHHHHHHCCCCEEEe
Confidence 3677766654431 011346787 6777 5433 45 7899998765 256899999999999996
Q ss_pred cccccHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHHh---cCC
Q psy10186 79 PFYGDQLSHVRHIVDL---------GAGVELSYFNITLESIAWATSIVL---NNP 121 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~---------g~g~~~~~~~~~~~~l~~~l~~ll---~~~ 121 (124)
+.....+.+.+. +.|..+.+ .+.+++.++|.+++ +|+
T Consensus 396 ----~~gg~~e~v~~~~~~~~~~~~~~G~l~~~--~d~~~la~~i~~ll~~~~~~ 444 (485)
T 1rzu_A 396 ----RTGGLADTVIDANHAALASKAATGVQFSP--VTLDGLKQAIRRTVRYYHDP 444 (485)
T ss_dssp ----SSHHHHHHCCBCCHHHHHTTCCCBEEESS--CSHHHHHHHHHHHHHHHTCH
T ss_pred ----CCCChhheecccccccccccCCcceEeCC--CCHHHHHHHHHHHHHHhCCH
Confidence 445566666655 68888853 36899999999998 565
No 50
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.90 E-value=1.7e-05 Score=57.91 Aligned_cols=97 Identities=14% Similarity=0.163 Sum_probs=67.6
Q ss_pred CCCeEEEEEcCCC---------CCCCCCcEE-EeeccChH---HhhcCCCcceEEecC----ChhhHHHHHHhCCCeeee
Q psy10186 16 TGLTVLWRYEGDS---------IENLPGNVH-IRKWIPQQ---DVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 16 ~~~~~i~~~g~~~---------~~~~~~~v~-~~~~~~~~---~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~ 78 (124)
.+++++++.++.. ..+.++++. +.++ +.. .++ ..+|++|..+ ...+++||+++|+|+|+.
T Consensus 320 ~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~--~~adv~v~pS~~E~~g~~~lEAma~G~PvI~s 396 (485)
T 2qzs_A 320 QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIM--GGADVILVPSRFEPCGLTQLYGLKYGTLPLVR 396 (485)
T ss_dssp TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHH--HHCSEEEECCSCCSSCSHHHHHHHHTCEEEEE
T ss_pred CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHH--HhCCEEEECCccCCCcHHHHHHHHCCCCEEEC
Confidence 3678776654431 012346786 7777 543 345 7899998765 246899999999999996
Q ss_pred cccccHHHHHHHHHHc---------CceeEecCCCCCHHHHHHHHHHHh---cCC
Q psy10186 79 PFYGDQLSHVRHIVDL---------GAGVELSYFNITLESIAWATSIVL---NNP 121 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~---------g~g~~~~~~~~~~~~l~~~l~~ll---~~~ 121 (124)
+-....+.+.+. +.|..+.+ .+.+++.++|.+++ +|+
T Consensus 397 ----~~gg~~e~v~~~~~~~~~~~~~~G~l~~~--~d~~~la~~i~~ll~~~~~~ 445 (485)
T 2qzs_A 397 ----RTGGLADTVSDCSLENLADGVASGFVFED--SNAWSLLRAIRRAFVLWSRP 445 (485)
T ss_dssp ----SSHHHHHHCCBCCHHHHHTTCCCBEEECS--SSHHHHHHHHHHHHHHHTSH
T ss_pred ----CCCCccceeccCccccccccccceEEECC--CCHHHHHHHHHHHHHHcCCH
Confidence 445566666655 68888863 36899999999998 554
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.86 E-value=6e-05 Score=58.44 Aligned_cols=101 Identities=11% Similarity=0.198 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCC------------CCCCCcEEEeeccChHHhhcC-CCcceEEe---cCChhh
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSI------------ENLPGNVHIRKWIPQQDVLAH-PNCRLFIS---HGGVNS 64 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~------------~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~---~gG~~t 64 (124)
++++.+..-++-|.+.+...+|....+.. .-.++.+.+.+..+..+.+.. ..+|+++. .+|.+|
T Consensus 535 i~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~~~Di~LDt~p~~g~tT 614 (723)
T 4gyw_A 535 IDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTT 614 (723)
T ss_dssp CCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGGGCSEEECCSSSCCSHH
T ss_pred CCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhCCCeEEeCCCCcCCHHH
Confidence 35677888888899999888888765431 113567889998887664432 78999987 678899
Q ss_pred HHHHHHhCCCeeeeccc-ccHHHHHHHHHHcCceeEec
Q psy10186 65 ALEAIHYGIPIIGVPFY-GDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P~~-~~q~~~a~~~~~~g~g~~~~ 101 (124)
.+||+.+|+|+|..|-. .--..-+-.+...|+...+-
T Consensus 615 ~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia 652 (723)
T 4gyw_A 615 GMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIA 652 (723)
T ss_dssp HHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBC
T ss_pred HHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCccccc
Confidence 99999999999999743 23344566677778876664
No 52
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.65 E-value=0.0002 Score=50.86 Aligned_cols=92 Identities=16% Similarity=0.142 Sum_probs=63.3
Q ss_pred CCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcC-CCcceEEec-CC----------hhhHHHHHHhCCCeeeecccccH
Q psy10186 17 GLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAH-PNCRLFISH-GG----------VNSALEAIHYGIPIIGVPFYGDQ 84 (124)
Q Consensus 17 ~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~~-gG----------~~t~~ea~~~g~P~l~~P~~~~q 84 (124)
+++|+++..+.. .+.+ |+.+.+++|..++... ..+|..+.. .| .+-+.|++++|+|+|+. +.
T Consensus 199 ~~~f~ivG~G~~-~~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~----~~ 272 (339)
T 3rhz_A 199 DIPLKVYTWQNV-ELPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQ----EG 272 (339)
T ss_dssp SSCEEEEESCCC-CCCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEE----TT
T ss_pred CCeEEEEeCCcc-cCcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEc----cC
Confidence 456655444332 3445 9999999999886532 344553332 22 23578999999999985 44
Q ss_pred HHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 85 LSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 85 ~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
..+++.+++.++|..+. +.+++.+.+..+.
T Consensus 273 ~~~~~~v~~~~~G~~~~----~~~e~~~~i~~l~ 302 (339)
T 3rhz_A 273 IANQELIENNGLGWIVK----DVEEAIMKVKNVN 302 (339)
T ss_dssp CTTTHHHHHHTCEEEES----SHHHHHHHHHHCC
T ss_pred hhHHHHHHhCCeEEEeC----CHHHHHHHHHHhC
Confidence 56778888899999997 5777877777653
No 53
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.64 E-value=4.7e-05 Score=59.78 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=60.0
Q ss_pred CCCcEEEeeccC----hHHhhcC-C-CcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEec
Q psy10186 32 LPGNVHIRKWIP----QQDVLAH-P-NCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 32 ~~~~v~~~~~~~----~~~~l~~-~-~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~ 101 (124)
..+++.+.++.+ ..++... . .+|++|..+ -..+++||+++|+|+|+- +.....+.+.+...|..+.
T Consensus 638 L~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg~~Gllv~ 713 (816)
T 3s28_A 638 LNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHGKSGFHID 713 (816)
T ss_dssp CBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBTTTBEEEC
T ss_pred CCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccCCcEEEeC
Confidence 457899998554 4554421 2 689998764 346899999999999995 4444556666667888886
Q ss_pred CCCCCHHHHHHHHHHHh----cCCC
Q psy10186 102 YFNITLESIAWATSIVL----NNPR 122 (124)
Q Consensus 102 ~~~~~~~~l~~~l~~ll----~~~~ 122 (124)
+. +.+++.++|.+++ .|+.
T Consensus 714 p~--D~e~LA~aI~~lL~~Ll~d~~ 736 (816)
T 3s28_A 714 PY--HGDQAADTLADFFTKCKEDPS 736 (816)
T ss_dssp TT--SHHHHHHHHHHHHHHHHHCTH
T ss_pred CC--CHHHHHHHHHHHHHHhccCHH
Confidence 43 5888888886665 6664
No 54
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=97.14 E-value=0.0014 Score=49.13 Aligned_cols=103 Identities=12% Similarity=0.193 Sum_probs=68.3
Q ss_pred HHHhhCCCeEEEEEcCCC---------CCCCCCcEEEeeccChHH---hhcCCCcceEEecC----ChhhHHHHHHhCCC
Q psy10186 11 TAFSRTGLTVLWRYEGDS---------IENLPGNVHIRKWIPQQD---VLAHPNCRLFISHG----GVNSALEAIHYGIP 74 (124)
Q Consensus 11 ~~l~~~~~~~i~~~g~~~---------~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~g----G~~t~~ea~~~g~P 74 (124)
..+.+.+.++++...++. ....+.++.+....+... ++ +.+|+++..+ -..+++||+++|+|
T Consensus 350 ~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--~~aD~~v~PS~~E~fgl~~lEAma~G~P 427 (536)
T 3vue_A 350 PELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIM--AGADVLAVPSRFEPCGLIQLQGMRYGTP 427 (536)
T ss_dssp HHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHH--HHCSEEEECCSCCSSCSHHHHHHHTTCC
T ss_pred HHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHH--HhhheeecccccCCCCHHHHHHHHcCCC
Confidence 334444667766544332 112567888888877644 44 7899999875 23589999999999
Q ss_pred eeeecccccHHHHHHHHHHcCceeEecCCC--------CCHHHHHHHHHHHhc
Q psy10186 75 IIGVPFYGDQLSHVRHIVDLGAGVELSYFN--------ITLESIAWATSIVLN 119 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~--------~~~~~l~~~l~~ll~ 119 (124)
+|+- +.....+.+.+...|..+...+ .+.+++.++|++.++
T Consensus 428 vI~s----~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 428 CACA----STGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp EEEC----SCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred EEEc----CCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 9995 5566777777766776544221 146788888877653
No 55
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=96.41 E-value=0.09 Score=33.82 Aligned_cols=78 Identities=12% Similarity=0.070 Sum_probs=47.1
Q ss_pred EEEeeccChHHhhcCCCcceE-EecCChhhHHHH---HHhCCCeeeecccccHHHHHHHHHHc--CceeEecCCCCCHHH
Q psy10186 36 VHIRKWIPQQDVLAHPNCRLF-ISHGGVNSALEA---IHYGIPIIGVPFYGDQLSHVRHIVDL--GAGVELSYFNITLES 109 (124)
Q Consensus 36 v~~~~~~~~~~~l~~~~~d~~-i~~gG~~t~~ea---~~~g~P~l~~P~~~~q~~~a~~~~~~--g~g~~~~~~~~~~~~ 109 (124)
..+.++++..-.++...+|++ +-.||.||+.|+ +.+++|++++|.+. .....+... ..-...+ +.++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~~~~~i~~~~----~~~e 163 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSLDAGLVHVAA----DVAG 163 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHHCTTTEEEES----SHHH
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChhhcCeEEEcC----CHHH
Confidence 344555553332222667774 557778887754 67999999999843 111122222 3334444 7888
Q ss_pred HHHHHHHHhcC
Q psy10186 110 IAWATSIVLNN 120 (124)
Q Consensus 110 l~~~l~~ll~~ 120 (124)
+.+.+++.+..
T Consensus 164 ~~~~l~~~~~~ 174 (176)
T 2iz6_A 164 AIAAVKQLLAK 174 (176)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 88888887653
No 56
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=96.17 E-value=0.072 Score=34.86 Aligned_cols=36 Identities=28% Similarity=0.320 Sum_probs=25.8
Q ss_pred hHHhhcCCCcceE-EecCChhhHHH---HHHhCCCeeeecc
Q psy10186 44 QQDVLAHPNCRLF-ISHGGVNSALE---AIHYGIPIIGVPF 80 (124)
Q Consensus 44 ~~~~l~~~~~d~~-i~~gG~~t~~e---a~~~g~P~l~~P~ 80 (124)
...++. ..+|++ +..||.||+.| ++.+++|+++++.
T Consensus 111 Rk~~m~-~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 111 RSFVLL-RNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHH-TTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHH-HhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 344444 677774 66778888775 5779999999953
No 57
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.90 E-value=0.016 Score=40.46 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC-------CCCC----CcE-EEeeccCh---HHhhcCCCcceEEecCChhhHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI-------ENLP----GNV-HIRKWIPQ---QDVLAHPNCRLFISHGGVNSAL 66 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~----~~v-~~~~~~~~---~~~l~~~~~d~~i~~gG~~t~~ 66 (124)
|.+.+.++++.|.+.++++++..++.+. ...+ .++ .+.+..+. ..++ ..||++|+.-+. ++.
T Consensus 198 p~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ali--~~a~l~I~~Dsg-~~H 274 (348)
T 1psw_A 198 PHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILI--AACKAIVTNDSG-LMH 274 (348)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHHHHH--HTSSEEEEESSH-HHH
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHHHHH--HhCCEEEecCCH-HHH
Confidence 5678889999998778888876444321 1111 133 33444443 3455 789999998543 455
Q ss_pred HHHHhCCCeeee
Q psy10186 67 EAIHYGIPIIGV 78 (124)
Q Consensus 67 ea~~~g~P~l~~ 78 (124)
-|.+.|+|+|.+
T Consensus 275 lAaa~g~P~v~l 286 (348)
T 1psw_A 275 VAAALNRPLVAL 286 (348)
T ss_dssp HHHHTTCCEEEE
T ss_pred HHHHcCCCEEEE
Confidence 588899999986
No 58
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=95.57 E-value=0.02 Score=39.73 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=68.3
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccChHH---hhcCCCcceEEecCChhhHHHHHHh
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQQD---VLAHPNCRLFISHGGVNSALEAIHY 71 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~~---~l~~~~~d~~i~~gG~~t~~ea~~~ 71 (124)
|.+.+.++++.|.+.++++++..|+.. ..+..+++.+.+-.+..+ ++ ..||++|+.-....-+ |.+.
T Consensus 195 p~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali--~~a~l~I~~DSG~~Hl-Aaa~ 271 (326)
T 2gt1_A 195 PEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVL--AGAKFVVSVDTGLSHL-TAAL 271 (326)
T ss_dssp CHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHH--HTCSEEEEESSHHHHH-HHHT
T ss_pred CHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHH--HhCCEEEecCCcHHHH-HHHc
Confidence 678889999998777888877655421 111223455555444433 55 7899999995443333 6669
Q ss_pred CCCeeee--cccccHHHHHHHHHHcCc-eeEec-----CCCCCHHHHHHHHHHHhcCCC
Q psy10186 72 GIPIIGV--PFYGDQLSHVRHIVDLGA-GVELS-----YFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 72 g~P~l~~--P~~~~q~~~a~~~~~~g~-g~~~~-----~~~~~~~~l~~~l~~ll~~~~ 122 (124)
|+|++.+ |. +-..+. -.|- ...+. -++++.+++.+++++++++..
T Consensus 272 g~P~v~lfg~t--~p~~~~----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~~~ 324 (326)
T 2gt1_A 272 DRPNITVYGPT--DPGLIG----GYGKNQMVCRAPGNELSQLTANAVKQFIEENAEKAA 324 (326)
T ss_dssp TCCEEEEESSS--CHHHHC----CCSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTTC-
T ss_pred CCCEEEEECCC--ChhhcC----CCCCCceEecCCcccccCCCHHHHHHHHHHHHHHhc
Confidence 9999997 32 211111 1111 12221 136789999999999987643
No 59
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=95.38 E-value=0.032 Score=39.45 Aligned_cols=115 Identities=16% Similarity=0.173 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCc-EEEeeccCh---HHhhcCCCcceEEecCChhhHHHHHH
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGN-VHIRKWIPQ---QDVLAHPNCRLFISHGGVNSALEAIH 70 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~-v~~~~~~~~---~~~l~~~~~d~~i~~gG~~t~~ea~~ 70 (124)
|.+.+.++++.|.+.++++++..++.+. ...+.+ +.+.+-.+. ..++ ..||++|+.-+.. +.=|.+
T Consensus 202 p~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl~e~~ali--~~a~~~i~~DsG~-~HlAaa 278 (349)
T 3tov_A 202 PAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQLGPLAAAM--NRCNLLITNDSGP-MHVGIS 278 (349)
T ss_dssp CHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCHHHHHHHH--HTCSEEEEESSHH-HHHHHT
T ss_pred CHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCHHHHHHHH--HhCCEEEECCCCH-HHHHHh
Confidence 6788899999997778888875444331 112222 334444443 3355 7899999995443 333888
Q ss_pred hCCCeeee--cccc-------c------HHHHHHHHHH---cCc--eeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 71 YGIPIIGV--PFYG-------D------QLSHVRHIVD---LGA--GVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 71 ~g~P~l~~--P~~~-------~------q~~~a~~~~~---~g~--g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.|+|++.+ |... + ....+. +.. ..+ +-.---++++.+++.+++++++..
T Consensus 279 ~g~P~v~lfg~t~p~~~~P~~~~~~vl~~~~~C~-C~~~~~~~C~~~~~~Cm~~I~~~~V~~a~~~lL~~ 347 (349)
T 3tov_A 279 QGVPIVALYGPSNPFFYGPYQAHAIVLETMDSYE-IGKSMKKIIKEGNYKGLSVISEEQVIKAAETLLLE 347 (349)
T ss_dssp TTCCEEEECSSCCHHHHSCTTCSEEEECHHHHHH-HHHHTTCCCCGGGCSTTTTSCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCccccCCCCCCeEEEeCCCCcC-ccCCccCCCCCCccchhhcCCHHHHHHHHHHHHhh
Confidence 99999996 2211 0 111122 222 112 100002467899999999998853
No 60
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=94.94 E-value=0.29 Score=32.50 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=44.8
Q ss_pred EEEeeccCh-HHhhcCCCcceE-EecCChhhHHHHH---------HhCCCeeeecc---cccHHHHHHHHHHcCc-----
Q psy10186 36 VHIRKWIPQ-QDVLAHPNCRLF-ISHGGVNSALEAI---------HYGIPIIGVPF---YGDQLSHVRHIVDLGA----- 96 (124)
Q Consensus 36 v~~~~~~~~-~~~l~~~~~d~~-i~~gG~~t~~ea~---------~~g~P~l~~P~---~~~q~~~a~~~~~~g~----- 96 (124)
+.+..++.. ..++. ..+|++ +..||.||+-|.+ .+++|++++-. +.+-....+.+.+.|.
T Consensus 89 ~~~~~~~~~Rk~~~~-~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~~ 167 (216)
T 1ydh_A 89 VRVVADMHERKAAMA-QEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGA 167 (216)
T ss_dssp EEEESSHHHHHHHHH-HHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHHH
T ss_pred ccccCCHHHHHHHHH-HhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChHH
Confidence 444444432 23333 567775 6678899988876 46999999853 2222233345555553
Q ss_pred ---eeEecCCCCCHHHHHHHHHHH
Q psy10186 97 ---GVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 97 ---g~~~~~~~~~~~~l~~~l~~l 117 (124)
-...+ +.+++.+.+++.
T Consensus 168 ~~~~~~~d----~~ee~~~~l~~~ 187 (216)
T 1ydh_A 168 RNIVVSAP----TAKELMEKMEEY 187 (216)
T ss_dssp HTTEEEES----SHHHHHHHHHHC
T ss_pred cCeEEEeC----CHHHHHHHHHHh
Confidence 23333 678877777653
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=94.68 E-value=0.063 Score=41.70 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=43.1
Q ss_pred HHhhcCCCcceEEecC----ChhhHHHHHHhCCCeeeecccccHHHHHHHHHHc-------CceeEec-CCCCCHHHHHH
Q psy10186 45 QDVLAHPNCRLFISHG----GVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDL-------GAGVELS-YFNITLESIAW 112 (124)
Q Consensus 45 ~~~l~~~~~d~~i~~g----G~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~-------g~g~~~~-~~~~~~~~l~~ 112 (124)
.+++ +.||++|..+ -..+.+||+++|+|+|+- +-......+.+. +.|+.+. .+..+.+++.+
T Consensus 513 ~~~~--~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s----~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~ae 586 (725)
T 3nb0_A 513 DEFV--RGCHLGVFPSYYEPWGYTPAECTVMGVPSITT----NVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVE 586 (725)
T ss_dssp HHHH--HHCSEEECCCSSBSSCHHHHHHHHTTCCEEEE----TTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHH
T ss_pred HHHH--hhceEEEeccccCCCCHHHHHHHHcCCCEEEe----CCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHH
Confidence 4456 7899999887 246899999999999995 444444444432 3576663 23345555444
Q ss_pred HHHHHh
Q psy10186 113 ATSIVL 118 (124)
Q Consensus 113 ~l~~ll 118 (124)
+|.+.+
T Consensus 587 aLa~aL 592 (725)
T 3nb0_A 587 QLVDYM 592 (725)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 62
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=94.04 E-value=0.043 Score=40.64 Aligned_cols=77 Identities=10% Similarity=0.070 Sum_probs=52.0
Q ss_pred EE-EeeccChHHhhcC-CCcceEEecC---Ch-hhHHHHHHhCC-----CeeeecccccHHHHHHHHHHcCceeEecCCC
Q psy10186 36 VH-IRKWIPQQDVLAH-PNCRLFISHG---GV-NSALEAIHYGI-----PIIGVPFYGDQLSHVRHIVDLGAGVELSYFN 104 (124)
Q Consensus 36 v~-~~~~~~~~~~l~~-~~~d~~i~~g---G~-~t~~ea~~~g~-----P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~ 104 (124)
+. +.++++..++... ..+|+++..+ |. .++.||+++|+ |+|+-...+ .+..+ ..|+.+++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l---~~g~lv~p-- 403 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL---TSALIVNP-- 403 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC---TTSEEECT--
T ss_pred EEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh---CCeEEECC--
Confidence 55 4678887764433 8899998876 43 57889999998 666543222 12222 25677764
Q ss_pred CCHHHHHHHHHHHhcCC
Q psy10186 105 ITLESIAWATSIVLNNP 121 (124)
Q Consensus 105 ~~~~~l~~~l~~ll~~~ 121 (124)
.+.++++++|.++++++
T Consensus 404 ~d~~~lA~ai~~lL~~~ 420 (482)
T 1uqt_A 404 YDRDEVAAALDRALTMS 420 (482)
T ss_dssp TCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHcCC
Confidence 35899999999999754
No 63
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=93.88 E-value=0.069 Score=39.80 Aligned_cols=79 Identities=20% Similarity=0.100 Sum_probs=54.8
Q ss_pred cEEEeeccChHHhhcC-CCcceEEecC---Chh-hHHHHHHhC---CCeeeecccccHHHHHHHHHHcCceeEecCCCCC
Q psy10186 35 NVHIRKWIPQQDVLAH-PNCRLFISHG---GVN-SALEAIHYG---IPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNIT 106 (124)
Q Consensus 35 ~v~~~~~~~~~~~l~~-~~~d~~i~~g---G~~-t~~ea~~~g---~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~ 106 (124)
.|.+.+++++.++.+. ..+|+++..+ |.| +..|++++| .|+|+- +-...+..+. ..|+.+++ .+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlS----e~aGa~~~l~--~~allVnP--~D 424 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILS----ETCGAAEVLG--EYCRSVNP--FD 424 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEE----TTBTTHHHHG--GGSEEECT--TB
T ss_pred CEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEe----CCCCCHHHhC--CCEEEECC--CC
Confidence 5788888887664443 8899999887 654 568999996 566654 2222333332 24777865 36
Q ss_pred HHHHHHHHHHHhcCC
Q psy10186 107 LESIAWATSIVLNNP 121 (124)
Q Consensus 107 ~~~l~~~l~~ll~~~ 121 (124)
.++++++|.++++.+
T Consensus 425 ~~~lA~AI~~aL~m~ 439 (496)
T 3t5t_A 425 LVEQAEAISAALAAG 439 (496)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999998765
No 64
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=93.62 E-value=0.9 Score=29.43 Aligned_cols=76 Identities=13% Similarity=0.007 Sum_probs=42.7
Q ss_pred EEeeccCh-HHhhcCCCcceE-EecCChhhHHHH---H------HhCCCeeeecc--ccc-HHHHHHHHHHcCc------
Q psy10186 37 HIRKWIPQ-QDVLAHPNCRLF-ISHGGVNSALEA---I------HYGIPIIGVPF--YGD-QLSHVRHIVDLGA------ 96 (124)
Q Consensus 37 ~~~~~~~~-~~~l~~~~~d~~-i~~gG~~t~~ea---~------~~g~P~l~~P~--~~~-q~~~a~~~~~~g~------ 96 (124)
.+..+++. ..++. ..+|++ +-.||.||+-|. + .+++|++++-. +.+ -....+.+.+.|.
T Consensus 82 ~~~~~~~~Rk~~~~-~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~ 160 (191)
T 1t35_A 82 IEVNGMHERKAKMS-ELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHL 160 (191)
T ss_dssp EEESHHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHH
T ss_pred ccCCCHHHHHHHHH-HHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHc
Confidence 33444442 33333 567775 667788998765 4 27899999854 222 2222245555552
Q ss_pred --eeEecCCCCCHHHHHHHHHHH
Q psy10186 97 --GVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 97 --g~~~~~~~~~~~~l~~~l~~l 117 (124)
-...+ +.+++.+.+++.
T Consensus 161 ~~~~~~~----~~~e~~~~l~~~ 179 (191)
T 1t35_A 161 KLIHSSS----RPDELIEQMQNY 179 (191)
T ss_dssp HHEEEES----SHHHHHHHHHTC
T ss_pred CeEEEeC----CHHHHHHHHHHh
Confidence 22333 677777777654
No 65
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=93.38 E-value=0.098 Score=35.76 Aligned_cols=30 Identities=33% Similarity=0.445 Sum_probs=26.6
Q ss_pred CCcceEEecCChhhHHHHHHh------CCCeeeecc
Q psy10186 51 PNCRLFISHGGVNSALEAIHY------GIPIIGVPF 80 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~------g~P~l~~P~ 80 (124)
..+|++|+=||-||+++++.. ++|++.+|.
T Consensus 34 ~~~D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 34 VEPEIVISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp SSCSEEEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCCCEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 578999999999999999875 889999975
No 66
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=92.13 E-value=1.4 Score=28.59 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=22.1
Q ss_pred CCcceE-EecCChhhHHHHHH---------hCCCeeeec
Q psy10186 51 PNCRLF-ISHGGVNSALEAIH---------YGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~~---------~g~P~l~~P 79 (124)
..+|++ +-.||.||+-|... +++|++++-
T Consensus 107 ~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 107 DRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred HHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 678885 55677899988752 589999984
No 67
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=91.79 E-value=0.19 Score=34.10 Aligned_cols=54 Identities=26% Similarity=0.351 Sum_probs=39.0
Q ss_pred CCcceEEecCChhhHHHHHHh---CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 51 PNCRLFISHGGVNSALEAIHY---GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~---g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..+|++|+=||-||+++++.. ++|++.++. +. +|... ++..+++.++++.+++.
T Consensus 40 ~~~D~vv~~GGDGTll~~a~~~~~~~PilGIn~-G~------------~Gfl~---~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 40 VTADLIVVVGGDGTVLKAAKKAADGTPMVGFKA-GR------------LGFLT---SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp BCCSEEEEEECHHHHHHHHTTBCTTCEEEEEES-SS------------CCSSC---CBCGGGHHHHHHHHHTT
T ss_pred CCCCEEEEEeCcHHHHHHHHHhCCCCCEEEEEC-CC------------CCccC---cCCHHHHHHHHHHHHcC
Confidence 578999999999999999887 889998863 21 12222 23566777777777654
No 68
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=91.79 E-value=0.56 Score=30.69 Aligned_cols=43 Identities=14% Similarity=0.229 Sum_probs=27.5
Q ss_pred EEEeeccC-hHHhhcCCCcceE-EecCChhhHHHHHH---------hCCCeeeec
Q psy10186 36 VHIRKWIP-QQDVLAHPNCRLF-ISHGGVNSALEAIH---------YGIPIIGVP 79 (124)
Q Consensus 36 v~~~~~~~-~~~~l~~~~~d~~-i~~gG~~t~~ea~~---------~g~P~l~~P 79 (124)
..+++++. ....+. ..+|++ +-.||.||+-|... +++|++++-
T Consensus 101 ~i~~~~~~~Rk~~m~-~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln 154 (199)
T 3qua_A 101 LIVTDTMRERKREME-HRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLD 154 (199)
T ss_dssp EEEESSHHHHHHHHH-HHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHH-HhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEc
Confidence 34445443 233333 677875 55677899888753 589999984
No 69
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=91.32 E-value=0.58 Score=32.48 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCC---CC-CCcEE----EeeccChH-HhhcCCCcceEEecCChhhHHHHHHh---
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIE---NL-PGNVH----IRKWIPQQ-DVLAHPNCRLFISHGGVNSALEAIHY--- 71 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~---~~-~~~v~----~~~~~~~~-~~l~~~~~d~~i~~gG~~t~~ea~~~--- 71 (124)
+...++.+.|.+.+..+.+........ .. +.... -...+... ... ..+|++|+-||-||+++++..
T Consensus 20 ~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~d~vi~~GGDGT~l~a~~~~~~ 97 (307)
T 1u0t_A 20 ETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAA--DGCELVLVLGGDGTFLRAAELARN 97 (307)
T ss_dssp HHHHHHHHHHHTTTCEEEEEC-------------------------------------CCCEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccc--cCCCEEEEEeCCHHHHHHHHHhcc
Confidence 456788888888888876643221100 00 00000 01111111 122 678999999999999999754
Q ss_pred -CCCeeeecc
Q psy10186 72 -GIPIIGVPF 80 (124)
Q Consensus 72 -g~P~l~~P~ 80 (124)
++|++.++.
T Consensus 98 ~~~pvlgi~~ 107 (307)
T 1u0t_A 98 ASIPVLGVNL 107 (307)
T ss_dssp HTCCEEEEEC
T ss_pred CCCCEEEEeC
Confidence 899999864
No 70
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=90.63 E-value=2.5 Score=27.91 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=21.6
Q ss_pred CCcceE-EecCChhhHHHHHH----------hCCCeeeec
Q psy10186 51 PNCRLF-ISHGGVNSALEAIH----------YGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~~----------~g~P~l~~P 79 (124)
..+|++ +-.||.||+-|... +++|++++.
T Consensus 130 ~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 130 RYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp HTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred HhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 678885 56778899887643 479999984
No 71
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=88.34 E-value=4 Score=26.93 Aligned_cols=76 Identities=18% Similarity=0.155 Sum_probs=42.0
Q ss_pred EEeeccCh-HHhhcCCCcceE-EecCChhhHHHHHH---------hCCCeeeecc--cccHH-HHHHHHHHcCc------
Q psy10186 37 HIRKWIPQ-QDVLAHPNCRLF-ISHGGVNSALEAIH---------YGIPIIGVPF--YGDQL-SHVRHIVDLGA------ 96 (124)
Q Consensus 37 ~~~~~~~~-~~~l~~~~~d~~-i~~gG~~t~~ea~~---------~g~P~l~~P~--~~~q~-~~a~~~~~~g~------ 96 (124)
.+..+++. ..++. ..+|++ +-.||.||+-|.+. +++|++++-. +.+.. ...+.+.+.|.
T Consensus 94 ~~~~~f~~Rk~~~~-~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~~~ 172 (215)
T 2a33_A 94 RAVADMHQRKAEMA-KHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAR 172 (215)
T ss_dssp EEESSHHHHHHHHH-HTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHHHH
T ss_pred eecCCHHHHHHHHH-HhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHHHC
Confidence 33444442 33333 567775 56788999988763 3899998853 22221 12233444442
Q ss_pred --eeEecCCCCCHHHHHHHHHHH
Q psy10186 97 --GVELSYFNITLESIAWATSIV 117 (124)
Q Consensus 97 --g~~~~~~~~~~~~l~~~l~~l 117 (124)
-...+ +.+++.+.+++.
T Consensus 173 ~~~~~~d----~~ee~~~~l~~~ 191 (215)
T 2a33_A 173 EIIVSAP----TAKELVKKLEEY 191 (215)
T ss_dssp TTEEEES----SHHHHHHHHHC-
T ss_pred CeEEEeC----CHHHHHHHHHHh
Confidence 12333 677777777653
No 72
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=87.51 E-value=0.5 Score=32.40 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHHHHh----CCCeeeec
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHY----GIPIIGVP 79 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~----g~P~l~~P 79 (124)
+...++.+.|.+.++.+.+..........+. . ........- ..+|++|+-||-||+++++.. ++|++.++
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~-~---~~~~~~~~~--~~~D~vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIAHELQLKN-V---PTGTLAEIG--QQADLAVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSS-C---CEECHHHHH--HHCSEEEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhccccc-c---cccchhhcc--cCCCEEEEEcCcHHHHHHHHHhhcCCCCEEEEE
Confidence 3466777788888887655422110000000 0 011223323 568999999999999999853 78999986
Q ss_pred c
Q psy10186 80 F 80 (124)
Q Consensus 80 ~ 80 (124)
.
T Consensus 95 ~ 95 (292)
T 2an1_A 95 R 95 (292)
T ss_dssp S
T ss_pred C
Confidence 3
No 73
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=85.04 E-value=0.61 Score=33.41 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=24.6
Q ss_pred CCcceEEecCChhhHHHHHHh----CCCeeee
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GIPIIGV 78 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~P~l~~ 78 (124)
..+|++|+=||-||++.|+.. +.|++.+
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred cCCCEEEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 689999999999999999873 5788887
No 74
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=81.55 E-value=2.2 Score=25.20 Aligned_cols=64 Identities=20% Similarity=0.073 Sum_probs=45.5
Q ss_pred CCcceEEecCChhh---------HHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 51 PNCRLFISHGGVNS---------ALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 51 ~~~d~~i~~gG~~t---------~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
..++++|.-.|..| +-.|...|+|++.+=.++.+. .-..+++.+..++-. +.+.+.++|+..++
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~a~~iV~W----n~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAVSSEVVGW----NPHCIRDALEDALD 109 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHHCSEEECS----CHHHHHHHHHHHHC
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhhCceeccC----CHHHHHHHHHhccC
Confidence 78999999888766 556788999999984444321 222355555555554 89999999988764
No 75
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=80.18 E-value=5.3 Score=27.43 Aligned_cols=30 Identities=27% Similarity=0.456 Sum_probs=25.4
Q ss_pred CCcceEEecCChhhHHHHHHh--C-CCeeeecc
Q psy10186 51 PNCRLFISHGGVNSALEAIHY--G-IPIIGVPF 80 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~--g-~P~l~~P~ 80 (124)
..+|++|+=||-||++.++.. + +|++.+..
T Consensus 67 ~~~DlvIvlGGDGT~L~aa~~~~~~~PilGIN~ 99 (278)
T 1z0s_A 67 ENFDFIVSVGGDGTILRILQKLKRCPPIFGINT 99 (278)
T ss_dssp GGSSEEEEEECHHHHHHHHTTCSSCCCEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHhCCCCcEEEECC
Confidence 478999999999999999865 3 78888854
No 76
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=79.40 E-value=11 Score=24.73 Aligned_cols=73 Identities=11% Similarity=-0.011 Sum_probs=49.2
Q ss_pred CCcce-EEecCChhhHH----------------HHHHhCCCeeeeccc----ccHHHHHHHHHHcCceeEecCC-----C
Q psy10186 51 PNCRL-FISHGGVNSAL----------------EAIHYGIPIIGVPFY----GDQLSHVRHIVDLGAGVELSYF-----N 104 (124)
Q Consensus 51 ~~~d~-~i~~gG~~t~~----------------ea~~~g~P~l~~P~~----~~q~~~a~~~~~~g~g~~~~~~-----~ 104 (124)
..+|+ +|..+..+|+. .++..++|++++|.- .....|...+.+.|.-++.... +
T Consensus 83 ~~aD~mvIaPaTanTlAKiA~GiaDnLlt~aa~~~L~~~~plvlaPamn~~m~~h~~Nm~~L~~~G~~ii~P~~~lacg~ 162 (207)
T 3mcu_A 83 IPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAPEK 162 (207)
T ss_dssp SCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHHBTTEEECCEEESCTTT
T ss_pred hhcCEEEEecCCHHHHHHHHccccCcHHHHHHHHHHhcCCCEEEEECCChhHHHHHHHHHHHHHCCCEEECCCCccCCCC
Confidence 67888 57777655442 346789999999983 2335788889988876544311 0
Q ss_pred ------CCHHHHHHHHHHHhcCCCC
Q psy10186 105 ------ITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 105 ------~~~~~l~~~l~~ll~~~~~ 123 (124)
.+.+++.+.+.+.+....+
T Consensus 163 ~g~g~mae~~~I~~~i~~~l~~~~~ 187 (207)
T 3mcu_A 163 KPNSMVARMELLEDTVLEALQGKQL 187 (207)
T ss_dssp STTCEEECGGGHHHHHHHHHTTCCC
T ss_pred cCCcCCCCHHHHHHHHHHHHhCCCC
Confidence 2466888888888766544
No 77
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=78.41 E-value=10 Score=23.85 Aligned_cols=62 Identities=23% Similarity=0.272 Sum_probs=40.7
Q ss_pred CCcceEEe--cC---ChhhHHHH---HHhCCCeeeeccc----c-c--HHHHHHHHHHc-----------------Ccee
Q psy10186 51 PNCRLFIS--HG---GVNSALEA---IHYGIPIIGVPFY----G-D--QLSHVRHIVDL-----------------GAGV 98 (124)
Q Consensus 51 ~~~d~~i~--~g---G~~t~~ea---~~~g~P~l~~P~~----~-~--q~~~a~~~~~~-----------------g~g~ 98 (124)
..||++|- .| ..||.+|. ...|||++++-.. + + +..++ +.+. ..|.
T Consensus 68 ~~aD~viA~ldg~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~--~~~~~e~~f~~~N~~~~G~i~~~g~ 145 (162)
T 3ehd_A 68 LASDLLVALLDGPTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDA--LNEIAENQFHYLNLYTVGLIKLNGR 145 (162)
T ss_dssp HTCSEEEEECCSSSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHH--TTSTTCCCSCCCCHHHHHHHHTTEE
T ss_pred HHCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhh--hHHHhhhhhhhhhHHHhhhHHhCCe
Confidence 78999877 33 47898885 8899999998332 1 1 11122 1111 2667
Q ss_pred EecCCCCCHHHHHHHHHHHh
Q psy10186 99 ELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 99 ~~~~~~~~~~~l~~~l~~ll 118 (124)
+++ +.+++.+.|++.+
T Consensus 146 ~~~----~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 146 VVS----SEEDLLEEIKQRL 161 (162)
T ss_dssp EES----SHHHHHHHHHHTC
T ss_pred EEe----CHHHHHHHHHHHh
Confidence 776 8999999988765
No 78
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=74.63 E-value=2.5 Score=30.48 Aligned_cols=30 Identities=17% Similarity=0.499 Sum_probs=25.2
Q ss_pred CCcceEEecCChhhHHHHHHh----CC-Ceeeecc
Q psy10186 51 PNCRLFISHGGVNSALEAIHY----GI-PIIGVPF 80 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~----g~-P~l~~P~ 80 (124)
..+|++|+=||-||++.++.. ++ |++.++.
T Consensus 113 ~~~DlVIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 113 NRTDLLVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHCSEEEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred cCCCEEEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 579999999999999999764 56 7888853
No 79
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=74.09 E-value=1.3 Score=28.75 Aligned_cols=52 Identities=17% Similarity=0.214 Sum_probs=36.6
Q ss_pred CCCcceEEecCChhhHHHHHHhCCCeeeeccc-ccHHHHHHHHHHcC--ceeEecC
Q psy10186 50 HPNCRLFISHGGVNSALEAIHYGIPIIGVPFY-GDQLSHVRHIVDLG--AGVELSY 102 (124)
Q Consensus 50 ~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~-~~q~~~a~~~~~~g--~g~~~~~ 102 (124)
...+|++|+.||....+..- .++|++-+|.. .|=..--..+.+.+ +|++-.+
T Consensus 49 ~~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~ 103 (196)
T 2q5c_A 49 QDEVDAIISRGATSDYIKKS-VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYK 103 (196)
T ss_dssp TTTCSEEEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEES
T ss_pred cCCCeEEEECChHHHHHHHh-CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCc
Confidence 37899999999998888875 68999999876 35444444444442 4554443
No 80
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=69.87 E-value=16 Score=26.95 Aligned_cols=73 Identities=12% Similarity=0.173 Sum_probs=48.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hhHHH
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NSALE 67 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t~~e 67 (124)
.+.+++.|.+.|++.++.+.++. .....+.++++.-.... ..++ ..+..++++|.|. +.+.|
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N~~~~l~~ 84 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGSNALPFLKDFPEDFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGNAMGALSN 84 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGHHHHTTCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcchHHHHHHHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHHHHHHHHH
Confidence 46788999999999988887653 12233456665544421 1111 1455667788764 45789
Q ss_pred HHHhCCCeeee
Q psy10186 68 AIHYGIPIIGV 78 (124)
Q Consensus 68 a~~~g~P~l~~ 78 (124)
|...++|+|++
T Consensus 85 A~~~~~Pll~i 95 (528)
T 1q6z_A 85 AWNSHSPLIVT 95 (528)
T ss_dssp HHHTTCCEEEE
T ss_pred HhhcCCCEEEE
Confidence 99999999998
No 81
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=69.50 E-value=19 Score=25.07 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=42.6
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCC-----CCCCCcEEEe-----------ecc--C---------hHHhhcCCCcceEEec
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSI-----ENLPGNVHIR-----------KWI--P---------QQDVLAHPNCRLFISH 59 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~-----~~~~~~v~~~-----------~~~--~---------~~~~l~~~~~d~~i~~ 59 (124)
.++++.|.+.|.+++|++..... .+..-.+..+ .++ + ...++...+-|++|++
T Consensus 20 lala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~ 99 (365)
T 3s2u_A 20 LACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGL 99 (365)
T ss_dssp HHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEc
Confidence 46788999999999998754321 1000011111 100 0 0112222478999999
Q ss_pred CChhhH---HHHHHhCCCeeee
Q psy10186 60 GGVNSA---LEAIHYGIPIIGV 78 (124)
Q Consensus 60 gG~~t~---~ea~~~g~P~l~~ 78 (124)
||+-+. +.|...|+|+++.
T Consensus 100 g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 100 GGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp SSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCcchHHHHHHHHHcCCCEEEE
Confidence 997553 5677899999975
No 82
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=69.47 E-value=1.8 Score=28.83 Aligned_cols=30 Identities=20% Similarity=0.376 Sum_probs=25.8
Q ss_pred CCcceEEecCChhhHHHHHHhCCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~ 81 (124)
..+|++||.||....+..- .++|++-++..
T Consensus 62 ~~~dVIISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 62 ERCDAIIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp SCCSEEEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred CCCeEEEeCChHHHHHHhh-CCCCEEEecCC
Confidence 3599999999998888874 68999999875
No 83
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=67.70 E-value=17 Score=21.70 Aligned_cols=54 Identities=9% Similarity=0.129 Sum_probs=36.7
Q ss_pred hHHHHHH-----hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 64 SALEAIH-----YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 64 t~~ea~~-----~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
.+++.+. ..+|+|++.-..+.. ......+.|+--.+. +-++.++|.+.++++++
T Consensus 74 el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~~~~Ga~~yl~-KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 74 DLLKNIRADEELKHLPVLMITAEAKRE-QIIEAAQAGVNGYIV-KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHHHHTTCCEEEE-SSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHh
Confidence 4566654 468988886554444 445555677765554 45889999999998874
No 84
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=67.57 E-value=29 Score=25.96 Aligned_cols=72 Identities=13% Similarity=0.233 Sum_probs=49.7
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hh
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NS 64 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t 64 (124)
.+.+++.|.+.|++.++.+.++. ..+ +.++++.-.... ..++ ..+..+++++.|. +.
T Consensus 14 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~--~~i~~v~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~ 91 (566)
T 1ozh_A 14 ADLVVSQLEAQGVRQVFGIPGAKIDKVFDSLLD--SSIRIIPVRHEANAAFMAAAVGRITGKAGVALVTSGPGCSNLITG 91 (566)
T ss_dssp HHHHHHHHHHHTCCEEEEECCTTTHHHHHHGGG--SSSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHHH
T ss_pred HHHHHHHHHHCCCCEEEEcCCCchHHHHHHHHh--CCCcEEEeCCHHHHHHHHHHHHHHHCCCEEEEEccChHHHHHHHH
Confidence 56788999999998888877654 222 346665544321 1111 1456678999885 67
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.||.+.++|+|++.
T Consensus 92 l~~A~~~~vPll~it 106 (566)
T 1ozh_A 92 MATANSEGDPVVALG 106 (566)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCEEEEe
Confidence 889999999999983
No 85
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=65.87 E-value=2.4 Score=32.78 Aligned_cols=74 Identities=8% Similarity=-0.015 Sum_probs=48.4
Q ss_pred EeeccChHHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHH-H----HHHHcCceeEecCCCCCHHHHHH
Q psy10186 38 IRKWIPQQDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHV-R----HIVDLGAGVELSYFNITLESIAW 112 (124)
Q Consensus 38 ~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a-~----~~~~~g~g~~~~~~~~~~~~l~~ 112 (124)
+.++.+-.+++ ..+|++||--+. .+.|.+..++|+|......++...- + -+.+.-.|-++. +.++|.+
T Consensus 603 ~~~~~di~~ll--~~aD~lITDySS-v~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~----~~~eL~~ 675 (729)
T 3l7i_A 603 VSNYNDVSELF--LISDCLITDYSS-VMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYT----EPYGLAK 675 (729)
T ss_dssp CTTCSCHHHHH--HTCSEEEESSCT-HHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEES----SHHHHHH
T ss_pred CCCCcCHHHHH--HHhCEEEeechH-HHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeEC----CHHHHHH
Confidence 34456677888 789999999877 7999999999999986655543220 0 001112233332 6778887
Q ss_pred HHHHHh
Q psy10186 113 ATSIVL 118 (124)
Q Consensus 113 ~l~~ll 118 (124)
+|+...
T Consensus 676 ~i~~~~ 681 (729)
T 3l7i_A 676 ELKNLD 681 (729)
T ss_dssp HHTTHH
T ss_pred HHhhhh
Confidence 776654
No 86
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=65.33 E-value=17 Score=20.88 Aligned_cols=50 Identities=12% Similarity=0.073 Sum_probs=31.7
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+. .......+.|+--.+. +.++.++|...+++++....
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~ 123 (142)
T 2qxy_A 74 PDTKVAVLSAYVDK-DLIINSVKAGAVDYIL-KPFRLDYLLERVKKIISSTP 123 (142)
T ss_dssp TTCEEEEEESCCCH-HHHHHHHHHTCSCEEE-SSCCHHHHHHHHHHHHHC--
T ss_pred CCCCEEEEECCCCH-HHHHHHHHCCcceeEe-CCCCHHHHHHHHHHHHhhcc
Confidence 36888887544443 3444455566554444 35689999999999886543
No 87
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=65.10 E-value=33 Score=25.69 Aligned_cols=75 Identities=12% Similarity=0.076 Sum_probs=49.8
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CC--CCCcEEEeeccCh-HHhhc-------CCCcceEEecCChh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----EN--LPGNVHIRKWIPQ-QDVLA-------HPNCRLFISHGGVN------S 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~--~~~~v~~~~~~~~-~~~l~-------~~~~d~~i~~gG~~------t 64 (124)
..+.+++.|.+.|++.++.+.++.. .. ..+.++++.-... ...++ ..+..+++++.|.| .
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~~N~~~g 92 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPA 92 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHHCSSCEEEECSSHHHHHHHHHHHHHHHCCCEEEEECSSHHHHTTHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccHHHHHHHHhCCCceEEEecCcHHHHHHHHHHHHhhCCCEEEEECCchhhhhhhHH
Confidence 4567888999999998888766541 11 1235665554431 11111 14567789999864 6
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.||..-++|+|++.
T Consensus 93 ia~A~~d~vPll~it 107 (578)
T 3lq1_A 93 VAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCeEEEe
Confidence 789999999999984
No 88
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=64.82 E-value=2.5 Score=26.55 Aligned_cols=65 Identities=9% Similarity=0.069 Sum_probs=37.9
Q ss_pred CCcceEEecC---ChhhHHHH---HHhCCCeeeeccccc-HHHHHHHHHHcCc---eeEecCCCCCHHHHHHHHHHHhc
Q psy10186 51 PNCRLFISHG---GVNSALEA---IHYGIPIIGVPFYGD-QLSHVRHIVDLGA---GVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 51 ~~~d~~i~~g---G~~t~~ea---~~~g~P~l~~P~~~~-q~~~a~~~~~~g~---g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
..||++|--. ..||.+|. ...|||++++-...+ ...|+. +..... -....+ +.+++...|.+.+.
T Consensus 76 ~~aD~vva~~~~~d~Gt~~EiGyA~algKPVi~l~~~~~~~~~n~M-~~g~~~~~~~~~~~y---~~~el~~~l~~~~~ 150 (165)
T 2khz_A 76 QQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAM-IRGAADGSRFQVWDY---AEGEVETMLDRYFE 150 (165)
T ss_dssp HHCSEEEEECSSCCHHHHHHHHHHHHTCSSEEEEECTTTTCCCCHH-HHHTCCSSSEEEEEC---CTTTHHHHHHHHHH
T ss_pred HhCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEcCCCCCcchhh-hcccCccceeEEEec---CHHHHHHHHHHHHH
Confidence 7899986554 68999985 788999999832221 222333 332222 112222 45667777776664
No 89
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=64.74 E-value=22 Score=26.89 Aligned_cols=75 Identities=13% Similarity=0.219 Sum_probs=49.9
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccCh-HHhhc-------CCCcceEEecCChh------
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIPQ-QDVLA-------HPNCRLFISHGGVN------ 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~-~~~l~-------~~~~d~~i~~gG~~------ 63 (124)
.-+.+++.|.+.|++.++.+.++.. .+.++.++++.-... ...++ ..+..+++++.|.|
T Consensus 13 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~dal~~~~~~i~~i~~~hE~~Aa~aA~GyAr~tg~~gv~~~TsGpG~~N~~~ 92 (603)
T 4feg_A 13 AGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMN 92 (603)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHHHHHTTTTSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHHhccCCCeEEEecChHHHHHHHHHHHHHhCCceEEEecCCchHHHHHH
Confidence 3467889999999998888766531 112245666554432 11110 14566789999864
Q ss_pred hHHHHHHhCCCeeeec
Q psy10186 64 SALEAIHYGIPIIGVP 79 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P 79 (124)
.+.+|..-++|+|++.
T Consensus 93 gia~A~~~~vPvl~it 108 (603)
T 4feg_A 93 GLYDAREDHVPVLALI 108 (603)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHHcCCCEEEEe
Confidence 5889999999999973
No 90
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=63.65 E-value=4.3 Score=28.27 Aligned_cols=31 Identities=16% Similarity=0.004 Sum_probs=25.2
Q ss_pred CCcceEEecCChhhHHHHHH--------hCCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEAIH--------YGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~--------~g~P~l~~P~~ 81 (124)
..+|++|.-||-||+.|++. .++|+.++|..
T Consensus 81 ~~~d~vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 81 FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HTCSEEEEEESHHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred cCCCEEEEEccchHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 46899999999999998753 46688888874
No 91
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=63.60 E-value=5.6 Score=27.31 Aligned_cols=31 Identities=19% Similarity=0.245 Sum_probs=25.8
Q ss_pred CCcceEEecCChhhHHHHHH------hCCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEAIH------YGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~------~g~P~l~~P~~ 81 (124)
...|.+|.-||-||+.|.+. .+.|+-++|..
T Consensus 62 ~~~d~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~G 98 (304)
T 3s40_A 62 SKVDLIIVFGGDGTVFECTNGLAPLEIRPTLAIIPGG 98 (304)
T ss_dssp TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred cCCCEEEEEccchHHHHHHHHHhhCCCCCcEEEecCC
Confidence 47899999999999999764 46788889984
No 92
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=63.36 E-value=45 Score=25.06 Aligned_cols=73 Identities=14% Similarity=0.255 Sum_probs=49.4
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccChHH-hh-------cCCCcceEEecCC------hhh
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQQD-VL-------AHPNCRLFISHGG------VNS 64 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~~-~l-------~~~~~d~~i~~gG------~~t 64 (124)
.+.+++.|.+.|++.++.+.++. ..+..+.++++.-..... .+ ...+..++++|.| .+.
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~g 86 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTLSSLMDAMGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLING 86 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHTTSSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCchHHHHHHHHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHHH
Confidence 46788999999999988887654 122103466555443211 11 1145668899988 467
Q ss_pred HHHHHHhCCCeeee
Q psy10186 65 ALEAIHYGIPIIGV 78 (124)
Q Consensus 65 ~~ea~~~g~P~l~~ 78 (124)
+.+|...++|+|++
T Consensus 87 l~~A~~~~vPll~I 100 (590)
T 1v5e_A 87 LYDAAMDNIPVVAI 100 (590)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHhcCCCEEEE
Confidence 88999999999998
No 93
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=62.80 E-value=7.4 Score=24.38 Aligned_cols=66 Identities=11% Similarity=0.142 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeecc--ChHHhhcCCCcceEEec--------CChhhHHHH---HH
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWI--PQQDVLAHPNCRLFISH--------GGVNSALEA---IH 70 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~--------gG~~t~~ea---~~ 70 (124)
+..+.+.+.|++.|..+++ ..+. ..+ ....+ .....+ ..||++|-- ...||..|. ..
T Consensus 27 ~~~~~l~~~l~~~G~~v~~--P~~~--~~~----~~~~i~~~d~~~i--~~aD~vVA~ldpf~g~~~D~GTafEiGyA~A 96 (161)
T 2f62_A 27 SYYNKVRELLKKENVMPLI--PTDN--EAT----EALDIRQKNIQMI--KDCDAVIADLSPFRGHEPDCGTAFEVGCAAA 96 (161)
T ss_dssp HHHHHHHHHHHTTTCEEEC--TTTT--CCS----SHHHHHHHHHHHH--HHCSEEEEECCCCSSSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEC--CCcc--Ccc----hHHHHHHHHHHHH--HhCCEEEEEecCCCCCCCCCcHHHHHHHHHH
Confidence 4667788888888876433 2111 111 11111 123334 789997655 357899985 78
Q ss_pred hCCCeeeec
Q psy10186 71 YGIPIIGVP 79 (124)
Q Consensus 71 ~g~P~l~~P 79 (124)
.|||++++-
T Consensus 97 lgKPVi~l~ 105 (161)
T 2f62_A 97 LNKMVLTFT 105 (161)
T ss_dssp TTCEEEEEC
T ss_pred CCCEEEEEE
Confidence 999999974
No 94
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=62.66 E-value=6.4 Score=27.37 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.7
Q ss_pred CCcceEEecCChhhHHHHHH------hCCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEAIH------YGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea~~------~g~P~l~~P~~ 81 (124)
..+|++|.-||-||+.|++. .++|+.++|..
T Consensus 79 ~~~d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~G 115 (337)
T 2qv7_A 79 ENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMG 115 (337)
T ss_dssp TTCSEEEEEECHHHHHHHHHHHTTCSSCCEEEEEECS
T ss_pred cCCCEEEEEcCchHHHHHHHHHHhCCCCCcEEEecCC
Confidence 56899999999999999853 35788889983
No 95
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=62.44 E-value=18 Score=20.08 Aligned_cols=48 Identities=10% Similarity=0.069 Sum_probs=31.9
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
...|++++ ...+ ........+.|+--.+. +.++.+++...+++++..+
T Consensus 79 ~~~~ii~~-~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~~ 126 (127)
T 2gkg_A 79 KNVPIVII-GNPD-GFAQHRKLKAHADEYVA-KPVDADQLVERAGALIGFP 126 (127)
T ss_dssp TTSCEEEE-ECGG-GHHHHHHSTTCCSEEEE-SSCCHHHHHHHHHHHHCCC
T ss_pred cCCCEEEE-ecCC-chhHHHHHHhCcchhee-CCCCHHHHHHHHHHHHcCC
Confidence 46888888 4333 33444455566654444 4578999999999988654
No 96
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=62.26 E-value=20 Score=26.48 Aligned_cols=28 Identities=25% Similarity=0.296 Sum_probs=21.3
Q ss_pred CCcceE-EecCChhhHHHHHH------------hCCCeeee
Q psy10186 51 PNCRLF-ISHGGVNSALEAIH------------YGIPIIGV 78 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea~~------------~g~P~l~~ 78 (124)
..+|+| +-.||.||+-|.+. +++|++++
T Consensus 244 ~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLl 284 (460)
T 3bq9_A 244 RCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILT 284 (460)
T ss_dssp HHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEE
T ss_pred HhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEE
Confidence 567775 56778999988732 58999998
No 97
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=62.23 E-value=19 Score=22.97 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=30.9
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh--h----------HHHHHHhCC
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN--S----------ALEAIHYGI 73 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~--t----------~~ea~~~g~ 73 (124)
+..+.++|+++|..+.++. +. +.+ ..+|.+|-.||.. . +-+....|+
T Consensus 15 ~~si~~al~~~G~~~~v~~------------------~~-~~l--~~~D~lilPG~g~~~~~~~~~~~~~~i~~~~~~~~ 73 (211)
T 4gud_A 15 ISSVKFAIERLGYAVTISR------------------DP-QVV--LAADKLFLPGVGTASEAMKNLTERDLIELVKRVEK 73 (211)
T ss_dssp HHHHHHHHHHTTCCEEEEC------------------CH-HHH--HHCSEEEECCCSCHHHHHHHHHHTTCHHHHHHCCS
T ss_pred HHHHHHHHHHCCCEEEEEC------------------CH-HHH--hCCCEEEECCCCCHHHHHHHHHhcChHHHHHHcCC
Confidence 3456677777777665431 11 224 4578887776421 1 223455789
Q ss_pred Ceeeec
Q psy10186 74 PIIGVP 79 (124)
Q Consensus 74 P~l~~P 79 (124)
|++.+=
T Consensus 74 PvlGIC 79 (211)
T 4gud_A 74 PLLGIC 79 (211)
T ss_dssp CEEEET
T ss_pred CEEEEc
Confidence 999873
No 98
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=62.16 E-value=25 Score=22.77 Aligned_cols=73 Identities=12% Similarity=0.059 Sum_probs=48.8
Q ss_pred CCcce-EEecCChhhHH----------------HHHHhCCCeeeeccc----ccHHHHHHHHHHcCceeEecC--CC---
Q psy10186 51 PNCRL-FISHGGVNSAL----------------EAIHYGIPIIGVPFY----GDQLSHVRHIVDLGAGVELSY--FN--- 104 (124)
Q Consensus 51 ~~~d~-~i~~gG~~t~~----------------ea~~~g~P~l~~P~~----~~q~~~a~~~~~~g~g~~~~~--~~--- 104 (124)
..+|+ +|..+..+|+. .++..++|++++|.- .....|...+.+.|.-++-.. +.
T Consensus 85 ~~aD~mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~~~G~~i~~P~~~~~~~~ 164 (201)
T 3lqk_A 85 TPLDCMVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLMATKNIYFIPFGQDNPQV 164 (201)
T ss_dssp SCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHHTSTTEEECCEEESCTTT
T ss_pred cccCEEEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHHHCCCEEECCCCcccccc
Confidence 67888 57777665543 224469999999984 345669999998886654321 12
Q ss_pred ------CCHHHHHHHHHHHhcCCCC
Q psy10186 105 ------ITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 105 ------~~~~~l~~~l~~ll~~~~~ 123 (124)
.+.+.+.+.+.+.++...+
T Consensus 165 ~p~s~~a~~~~i~~tv~~al~~~~~ 189 (201)
T 3lqk_A 165 KPNSLVARMEALPETIEAALRGQQY 189 (201)
T ss_dssp CTTCEEECGGGHHHHHHHHHTTCCC
T ss_pred CCCcccCCHHHHHHHHHHHHhcCCC
Confidence 1346888888888866543
No 99
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=61.59 E-value=21 Score=24.96 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=23.6
Q ss_pred EEeeccChHHhhcCCCcceEEecCChhhHHHHHH--hCCCeeeecc
Q psy10186 37 HIRKWIPQQDVLAHPNCRLFISHGGVNSALEAIH--YGIPIIGVPF 80 (124)
Q Consensus 37 ~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea~~--~g~P~l~~P~ 80 (124)
++.++++...+- .+-+.|+-.+-..+++-+++ .|++.+.-|.
T Consensus 93 rlL~~lD~~~i~--~~PK~~~GySDiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 93 GLLKYLDYDLIR--ENPKFFCGYSDITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp GGGGGCCHHHHH--TSCCEEEECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred HHHhhcChhHHH--hCCeEEEEecchHHHHHHHHHhhCCcEEEccc
Confidence 444555544433 33455666666666665655 4677766665
No 100
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=59.53 E-value=31 Score=21.92 Aligned_cols=88 Identities=8% Similarity=0.052 Sum_probs=51.3
Q ss_pred HHHHHHHhhCCCeEEEEEcCC--C------CCCCCCcEEEeecc-----ChHHhhcCCCcce-EEecCChhhHH------
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGD--S------IENLPGNVHIRKWI-----PQQDVLAHPNCRL-FISHGGVNSAL------ 66 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~--~------~~~~~~~v~~~~~~-----~~~~~l~~~~~d~-~i~~gG~~t~~------ 66 (124)
.++++.|.+.+.++-++..+. . +....++ +.+.. .+.++. ..+|+ +|..+..+|+.
T Consensus 19 ~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~--~~d~~~~~~~~hi~l~--~~aD~~vIaPaTantlAKiA~Gi 94 (181)
T 1g63_A 19 NHYIVELKQHFDEVNILFSPSSKNFINTDVLKLFCDN--LYDEIKDPLLNHINIV--ENHEYILVLPASANTINKIANGI 94 (181)
T ss_dssp HHHHHHHTTTSSCEEEEECGGGGGTSCGGGGGGTSSC--EECTTTCTTCCHHHHH--HTCSEEEEEEECHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHHhCC--cccccCCCCCcccccc--ccCCEEEEecCCHHHHHHHHccc
Confidence 456777777776555554332 1 1223344 33322 344444 67887 57777766553
Q ss_pred -------HHHHhCCCeeeecccc-----c--HHHHHHHHHHcCcee
Q psy10186 67 -------EAIHYGIPIIGVPFYG-----D--QLSHVRHIVDLGAGV 98 (124)
Q Consensus 67 -------ea~~~g~P~l~~P~~~-----~--q~~~a~~~~~~g~g~ 98 (124)
-++..++|++++|-.+ + -..|...+.+.|+-+
T Consensus 95 aDnllt~~~la~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~G~~i 140 (181)
T 1g63_A 95 CDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKV 140 (181)
T ss_dssp CCSHHHHHHHHTGGGEEEEECCCHHHHTCHHHHHHHHHHHTTTCEE
T ss_pred cCcHHHHHHHHcCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCCEE
Confidence 3366789999999542 1 245777777777543
No 101
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=59.28 E-value=21 Score=19.82 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=33.5
Q ss_pred HhCCCeeeecccccHHHHH---HHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 70 HYGIPIIGVPFYGDQLSHV---RHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 70 ~~g~P~l~~P~~~~q~~~a---~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
-.|+|.++.-....|.... ....+.|+..-+- ++.+.+++.+.+++++.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvl-kstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVL-KSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEE-ECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhh-ccCCHHHHHHHHHHHHH
Confidence 4699999987766665432 2234447776544 34589999999999874
No 102
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=59.26 E-value=11 Score=21.44 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=32.8
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
.+++.+.. ..|+|++....+... ....+.|+--.+. +.++.++|...+++++...
T Consensus 64 ~~~~~l~~~~~~~~~pii~~s~~~~~~~--~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 64 ALCGHFRSEPTLKHIPVIFVSGYAPRTE--GPADQPVPDAYLV-KPVKPPVLIAQLHALLARA 123 (133)
T ss_dssp HHHHHHHHSTTTTTCCEEEEESCCC-------TTSCCCSEEEE-SSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCccCCCCEEEEeCCCcHhH--HHHhhcCCceEEe-ccCCHHHHHHHHHHHHhhh
Confidence 34555443 688888865444433 3444555544444 4678999999999988543
No 103
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=58.52 E-value=43 Score=24.93 Aligned_cols=75 Identities=13% Similarity=0.065 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CC--CCCcEEEeeccCh-HHhhc-------CCCcceEEecCChh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----EN--LPGNVHIRKWIPQ-QDVLA-------HPNCRLFISHGGVN------S 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~--~~~~v~~~~~~~~-~~~l~-------~~~~d~~i~~gG~~------t 64 (124)
.-+.+++.|.+.|++.++.+.++.. .. ..+.++++.-... ...++ ..+..+++++.|.| .
T Consensus 10 ~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~~~i~~i~~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGpG~~N~~~g 89 (556)
T 3hww_A 10 WAAVILEALTRHGVRHICIAPGSRSTLLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPA 89 (556)
T ss_dssp HHHHHHHHHHTTTCCEEEECCCTTSHHHHHHHHHCTTCEEEECSCHHHHHHHHHHHHHHHCSCEEEEECSSHHHHTTHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCcHHHHHHHhhCCCceEEEecCCcHHHHHHHHHHHhhCCCEEEEECCCcHHHhhhHH
Confidence 3466888999999988888766541 11 1234555543221 11111 14567789999864 6
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.||..-++|+|++.
T Consensus 90 ia~A~~d~vPll~it 104 (556)
T 3hww_A 90 LIEAGLTGEKLILLT 104 (556)
T ss_dssp HHHHHHHCCCEEEEE
T ss_pred HHHHHHhCCCeEEEe
Confidence 889999999999983
No 104
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=57.36 E-value=56 Score=25.16 Aligned_cols=74 Identities=16% Similarity=0.231 Sum_probs=50.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------N 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~ 63 (124)
..+.+++.|.+.|++.++.+.++. +.+ .+.++++.-.... ..++ ..+..+++++.|. +
T Consensus 84 ~a~~lv~~L~~~GV~~vFg~PG~~~~pl~dal~~-~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgvv~~TsGpG~~N~~~ 162 (677)
T 1t9b_A 84 GGQIFNEMMSRQNVDTVFGYPGGAILPVYDAIHN-SDKFNFVLPKHEQGAGHMAEGYARASGKPGVVLVTSGPGATNVVT 162 (677)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHHTTT-CSSSEEECCSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHHTTHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccHHHHHHHHHh-CCCCeEEEeCChHHHHHHHHHHHHHHCCCEEEEECCChHHHHHHH
Confidence 356788999999999988886653 222 2346665544411 1111 1456778999985 5
Q ss_pred hHHHHHHhCCCeeeec
Q psy10186 64 SALEAIHYGIPIIGVP 79 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P 79 (124)
.+.+|.+-++|+|++.
T Consensus 163 gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 163 PMADAFADGIPMVVFT 178 (677)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHHcCCCEEEEe
Confidence 6789999999999983
No 105
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=57.18 E-value=24 Score=26.24 Aligned_cols=75 Identities=12% Similarity=0.327 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CC--CCCcEEEeeccChH-Hhhc-------CCCcceEEecCChh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----EN--LPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGVN------S 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~--~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~~------t 64 (124)
..+.+++.|.+.|++.++.+.++.. .. ..+.++++.-.... ..++ ..+..+++++.|.| .
T Consensus 5 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~dal~~~~~i~~i~~~~E~~Aa~~A~GyAr~tg~~~v~~~TsGpG~~N~~~g 84 (549)
T 3eya_A 5 VAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEWMSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLING 84 (549)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHHHHHHCSSEEEECSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHH
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCchHHHHHHHHhcCCCeEEEeCChHHHHHHHHHHHHHhCCCEEEEeCCCCcHhhhHHH
Confidence 4567889999999998888766531 10 11346655543311 1110 14567788999864 7
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.||...++|+|++.
T Consensus 85 i~~A~~~~vPvl~it 99 (549)
T 3eya_A 85 LFDCHRNHVPVLAIA 99 (549)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHHhhCCCEEEEe
Confidence 889999999999983
No 106
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=56.75 E-value=11 Score=21.65 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=33.3
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+++.+.. ..|+|++....+.........+.|+--.+. +.++.++|..+|++++..
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 67 SLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLE-KPIDENLLILSLHRAIDN 127 (140)
T ss_dssp HHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEEC-SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEe-CCCCHHHHHHHHHHHHHh
Confidence 45555543 678888743333322221334455554454 457899999999988754
No 107
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=56.73 E-value=36 Score=21.86 Aligned_cols=111 Identities=10% Similarity=-0.048 Sum_probs=62.7
Q ss_pred HHHHHHHhhCCCeEEEEEcCCC--------CCCCCCcEEEeec------cChHHhhcCCCcce-EEecCChhhHH-----
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDS--------IENLPGNVHIRKW------IPQQDVLAHPNCRL-FISHGGVNSAL----- 66 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~--------~~~~~~~v~~~~~------~~~~~~l~~~~~d~-~i~~gG~~t~~----- 66 (124)
.++++.|.+.|..+-++..+.- .....++ .+.+. +.+.++. ..+|+ +|..+..+|+.
T Consensus 25 ~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l~~~-v~~~~~~~~~~~~hi~l~--~~aD~~vIaPaTanTlAKiA~G 101 (194)
T 1p3y_1 25 SSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCDH-VYSEHGENGKRHSHVEIG--RWADIYCIIPATANILGQTANG 101 (194)
T ss_dssp HHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGGGSSE-EECTTCSSSCCCCHHHHH--HHCSEEEEEEECHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHhcCC-EeccccccCCCcCccccc--ccCCEEEEeCCCHHHHHHHHhh
Confidence 3566777777776655543311 1223344 22222 3344444 56887 57777666554
Q ss_pred --------HHHHhCCCeeeeccccc-------HHHHHHHHHHcCceeEecCCC----------------CCHHHHHHHHH
Q psy10186 67 --------EAIHYGIPIIGVPFYGD-------QLSHVRHIVDLGAGVELSYFN----------------ITLESIAWATS 115 (124)
Q Consensus 67 --------ea~~~g~P~l~~P~~~~-------q~~~a~~~~~~g~g~~~~~~~----------------~~~~~l~~~l~ 115 (124)
-++..++|++++|..+. -..|...+.+.|+-++-.... .+.+++.+.+.
T Consensus 102 iaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~lacg~~g~~g~~~~~~~iv~~v~ 181 (194)
T 1p3y_1 102 VAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAFEIATGTRKPNRGLITPDKALLAIE 181 (194)
T ss_dssp CCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC------------CBCCCHHHHHHHHH
T ss_pred ccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCcccccccCCcCcCCCCCCHHHHHHHHH
Confidence 22457899999997422 255777888887643321111 25778887777
Q ss_pred HHhcC
Q psy10186 116 IVLNN 120 (124)
Q Consensus 116 ~ll~~ 120 (124)
+.+..
T Consensus 182 ~~l~~ 186 (194)
T 1p3y_1 182 KGFKE 186 (194)
T ss_dssp HHCC-
T ss_pred HHhcc
Confidence 76643
No 108
>2e6x_A TT1592, hypothetical protein TTHA1281; unknown function protein, NPPSFA, national project on protei structural and functional analyses; 2.00A {Thermus thermophilus}
Probab=56.35 E-value=18 Score=19.09 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=22.3
Q ss_pred HHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHH
Q psy10186 11 TAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQD 46 (124)
Q Consensus 11 ~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~ 46 (124)
+.|..+|.+.+|.+|++... ..-+.-+++.....
T Consensus 4 d~L~~LG~~LvWRiGk~e~e--~~vvVRvG~Asatp 37 (69)
T 2e6x_A 4 DLLDKLGQHLVWRMGRAEDE--DVLVVRVGLASATP 37 (69)
T ss_dssp HHHHHTTCCEEEEEEECSSS--SCEEEEEEEGGGHH
T ss_pred HHHHHHhceeEEeecccccc--CcEEEEEeccccCc
Confidence 45778899999999998644 22334466654433
No 109
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=56.04 E-value=32 Score=22.48 Aligned_cols=46 Identities=20% Similarity=0.206 Sum_probs=32.7
Q ss_pred cce-EEecCChhhHH----------------HHHHhCCCeeeecccc----cHHHHHHHHHHcCcee
Q psy10186 53 CRL-FISHGGVNSAL----------------EAIHYGIPIIGVPFYG----DQLSHVRHIVDLGAGV 98 (124)
Q Consensus 53 ~d~-~i~~gG~~t~~----------------ea~~~g~P~l~~P~~~----~q~~~a~~~~~~g~g~ 98 (124)
+|+ +|..+..+|+. .++..++|++++|... -...|...+.+.|+-+
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~Lk~~~plvl~Paem~~~~~~~~Nm~~L~~~G~~i 161 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVLVPREAPFSSIHLENMLKLSNLGAVI 161 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCCEEEEECCSSCCHHHHHHHHHHHHHTCEE
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCcEEEEEcccccCHHHHHHHHHHHHCCCEE
Confidence 777 67778776653 3455699999999842 2456788888888753
No 110
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=56.00 E-value=43 Score=25.25 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCC----CC--CCCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------h
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSI----EN--LPGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------N 63 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~----~~--~~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~ 63 (124)
...+.+++.|.+.|++.++.+.++.. .. ..+.++++.-.... ..++ ..+..+++++.|. +
T Consensus 32 ~~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~~N~~~ 111 (604)
T 2x7j_A 32 HYIGSFIDEFALSGITDAVVCPGSRSTPLAVLCAAHPDISVHVQIDERSAGFFALGLAKAKQRPVLLICTSGTAAANFYP 111 (604)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSTTHHHHHHHHHCTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEECSSHHHHTTHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCcccHHHHHHHHhCCCceEEEecChHHHHHHHHHHHHhhCCCEEEEECChhHHHHHHH
Confidence 34567889999999999888876541 10 12346665544311 1110 1556788999986 6
Q ss_pred hHHHHHHhCCCeeeec
Q psy10186 64 SALEAIHYGIPIIGVP 79 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P 79 (124)
.+.||..-++|+|++.
T Consensus 112 gia~A~~~~vPlv~It 127 (604)
T 2x7j_A 112 AVVEAHYSRVPIIVLT 127 (604)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHhhcCCCEEEEe
Confidence 6789999999999984
No 111
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=55.55 E-value=22 Score=22.52 Aligned_cols=89 Identities=10% Similarity=-0.014 Sum_probs=51.3
Q ss_pred HHHHHHHhhCCCeEEEEEcCCC--CC------CCCCcEEE---eeccChHHhhcCCCcce-EEecCChhhHH--------
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDS--IE------NLPGNVHI---RKWIPQQDVLAHPNCRL-FISHGGVNSAL-------- 66 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~--~~------~~~~~v~~---~~~~~~~~~l~~~~~d~-~i~~gG~~t~~-------- 66 (124)
.++++.|.+.|.++-++..+.- +. ...+.++. ..+.++.++- ..+|+ +|..+..+|+.
T Consensus 22 ~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~--~~aD~~vVaPaTanTlakiA~GiaD 99 (175)
T 3qjg_A 22 SHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDNYYDEFEDPFLNHVDIA--NKHDKIIILPATSNTINKIANGICD 99 (175)
T ss_dssp HHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHHCSCEECTTTCTTCCHHHHH--HTCSEEEEEEECHHHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHhcCCEEecCCCCcccccccc--chhCEEEEeeCCHHHHHHHHccccC
Confidence 4567778777877766654421 11 11112221 1234455554 67888 56777665543
Q ss_pred -----HHHHhCCCeeeecccc-------cHHHHHHHHHHcCce
Q psy10186 67 -----EAIHYGIPIIGVPFYG-------DQLSHVRHIVDLGAG 97 (124)
Q Consensus 67 -----ea~~~g~P~l~~P~~~-------~q~~~a~~~~~~g~g 97 (124)
-++..++|++++|..+ -...|...+.+.|+-
T Consensus 100 nLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~ 142 (175)
T 3qjg_A 100 NLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDYGVS 142 (175)
T ss_dssp SHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHCCCE
Confidence 3456689999999432 234577778877754
No 112
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=55.46 E-value=49 Score=22.97 Aligned_cols=78 Identities=10% Similarity=0.056 Sum_probs=51.3
Q ss_pred CCcEEEeeccCh-HHhhcCCCcceEEecCChhhHHHHHHhCCCeeeecccccHHHHHHHHHHcCceeEecC--------C
Q psy10186 33 PGNVHIRKWIPQ-QDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGVPFYGDQLSHVRHIVDLGAGVELSY--------F 103 (124)
Q Consensus 33 ~~~v~~~~~~~~-~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~--------~ 103 (124)
.++..++-|.+. .++. ..+|.+.|.++.-.+.+.+ -+..+|+.| |+..-...-.+.|.-+.+.+ +
T Consensus 101 ~Pda~vV~y~n~saeVk--a~aD~v~TSsna~~~v~~~-~~~~iif~p---D~~Lg~~l~~~~~k~~i~~~~~g~C~vh~ 174 (300)
T 1wzu_A 101 YPNAPVVLYVNSTAEAK--AYADVTVTSANAVEVVKKL-DSDVVIFGP---DKNLAHYVAKMTGKKIIPVPSKGHCYVHQ 174 (300)
T ss_dssp STTSCEEEESSSCHHHH--TTCSEEECTTTHHHHHHTC-SCSEEEEES---CHHHHHHHHHHHCCEEEEC----------
T ss_pred CCCCeEEEecCChHHHH--HhCCEEEchHHHHHHHHhC-CCCeEEEEC---ChhHHHHHHHHcCCeEEECCCCCcCCCcc
Confidence 445667777764 4455 6799999999999999886 788888886 66554433333354444443 2
Q ss_pred CCCHHHHHHHHHH
Q psy10186 104 NITLESIAWATSI 116 (124)
Q Consensus 104 ~~~~~~l~~~l~~ 116 (124)
.++.+++.++.++
T Consensus 175 ~~t~e~i~~~~~~ 187 (300)
T 1wzu_A 175 KFTLDDVERAKKL 187 (300)
T ss_dssp -CCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHH
Confidence 5677777776654
No 113
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=54.10 E-value=29 Score=19.84 Aligned_cols=51 Identities=12% Similarity=-0.071 Sum_probs=31.5
Q ss_pred hCCCeeeecccccHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLG-AGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g-~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
...|+|++....+... .....+.| +--.+. +.++.++|.++|++......+
T Consensus 91 ~~~~ii~~t~~~~~~~-~~~~~~~g~~~~~l~-KP~~~~~L~~~i~~~~~~~~~ 142 (146)
T 3ilh_A 91 NKSIVCLLSSSLDPRD-QAKAEASDWVDYYVS-KPLTANALNNLYNKVLNEGHH 142 (146)
T ss_dssp TTCEEEEECSSCCHHH-HHHHHHCSSCCEEEC-SSCCHHHHHHHHHHHHCC---
T ss_pred CCCeEEEEeCCCChHH-HHHHHhcCCcceeee-CCCCHHHHHHHHHHHHHhccC
Confidence 3677777754444443 34445555 554444 567899999999999876654
No 114
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=53.52 E-value=46 Score=22.09 Aligned_cols=58 Identities=16% Similarity=0.259 Sum_probs=39.5
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCC-CCCcEEEeeccChHHhh----cC-CCcceEEecCCh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIEN-LPGNVHIRKWIPQQDVL----AH-PNCRLFISHGGV 62 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~-~~~~v~~~~~~~~~~~l----~~-~~~d~~i~~gG~ 62 (124)
.=.++++++.+.|.+++.+.++..... .+..+.+.+...-.+.+ .. ..+|++|+.++.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~~~~~v~s~~em~~~v~~~~~~~Dili~aAAv 94 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKRALKPEPHPNLSIREITNTKDLLIEMQERVQDYQVLIHSMAV 94 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECSBC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCccccccCCCCeEEEEHhHHHHHHHHHHHhcCCCCEEEEcCcc
Confidence 445788999999999999988765332 24567777665533221 11 579999998873
No 115
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=53.46 E-value=67 Score=23.92 Aligned_cols=73 Identities=15% Similarity=0.093 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccChH-Hhhc-----C-CCcceEEecCCh------hh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQ-DVLA-----H-PNCRLFISHGGV------NS 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~-~~l~-----~-~~~d~~i~~gG~------~t 64 (124)
..+.+++.|.+.|++.++.+.++.. .+ .+.++++.-.... ..++ . ....++++|.|. +.
T Consensus 5 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~-~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~g 83 (568)
T 2wvg_A 5 VGTYLAERLVQIGLKHHFAVAGDYNLVLLDNLLL-NKNMEQVYCCNELNCGFSAEGYARAKGAAAAVVTYSVGALSAFDA 83 (568)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCTTTHHHHHHHHT-CTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCccHHHHHHHhc-cCCceEeccCcHHHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHH
Confidence 3567889999999998888776541 11 2346665544321 1111 0 125678888886 56
Q ss_pred HHHHHHhCCCeeee
Q psy10186 65 ALEAIHYGIPIIGV 78 (124)
Q Consensus 65 ~~ea~~~g~P~l~~ 78 (124)
+.||...++|+|++
T Consensus 84 ia~A~~~~vPll~i 97 (568)
T 2wvg_A 84 IGGAYAENLPVILI 97 (568)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHhhhCCCEEEE
Confidence 78999999999998
No 116
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=51.83 E-value=27 Score=24.45 Aligned_cols=27 Identities=26% Similarity=0.353 Sum_probs=14.3
Q ss_pred ceEEecCChhhHHHHHH--hCCCeeeecc
Q psy10186 54 RLFISHGGVNSALEAIH--YGIPIIGVPF 80 (124)
Q Consensus 54 d~~i~~gG~~t~~ea~~--~g~P~l~~P~ 80 (124)
+.|+-.+-..+++-+++ .|++.+.-|.
T Consensus 109 K~~~GySDiTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 109 KIMIGYSDATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp CEEEECGGGHHHHHHHHHHHCCCEEECCC
T ss_pred eEEEEechHHHHHHHHHHhcCceEEECCh
Confidence 44555555555555554 3566555554
No 117
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=51.35 E-value=41 Score=25.24 Aligned_cols=75 Identities=19% Similarity=0.325 Sum_probs=49.5
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CC--CCCcEEEeeccChH-Hhh-----c--CCCcceEEecCCh------hh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----EN--LPGNVHIRKWIPQQ-DVL-----A--HPNCRLFISHGGV------NS 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~--~~~~v~~~~~~~~~-~~l-----~--~~~~d~~i~~gG~------~t 64 (124)
..+.+++.|.+.|++.++.+.++.. .. ..+.++++.-.... ..+ + ..+..++++|.|. +.
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~g 93 (590)
T 1ybh_A 14 GADILVEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQGGVFAAEGYARSSGKPGICIATSGPGATNLVSG 93 (590)
T ss_dssp HHHHHHHHHHTTTCCEEEECCCGGGHHHHHHHHHCSSCEECCCSSHHHHHHHHHHHHHHHSSCEEEEECTTHHHHTTHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCchHHHHHHHhccCCccEEeeCCHHHHHHHHHHHHHHHCCCEEEEeccCchHHHHHHH
Confidence 4577899999999998888766531 11 12346655443311 111 0 1456778999985 56
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.||...++|+|++.
T Consensus 94 v~~A~~~~vPll~it 108 (590)
T 1ybh_A 94 LADALLDSVPLVAIT 108 (590)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHhhCCCEEEEe
Confidence 789999999999983
No 118
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=49.78 E-value=14 Score=23.22 Aligned_cols=27 Identities=26% Similarity=0.319 Sum_probs=19.6
Q ss_pred CCcceE-EecCChhhHHHH---HH-------hCCCeeee
Q psy10186 51 PNCRLF-ISHGGVNSALEA---IH-------YGIPIIGV 78 (124)
Q Consensus 51 ~~~d~~-i~~gG~~t~~ea---~~-------~g~P~l~~ 78 (124)
..+|++ +-.||.||+-|. +. +++| +++
T Consensus 96 ~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll 133 (171)
T 1weh_A 96 DLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAV 133 (171)
T ss_dssp HHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEE
T ss_pred HhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEE
Confidence 567875 667788998665 44 6899 776
No 119
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=48.94 E-value=81 Score=23.53 Aligned_cols=73 Identities=11% Similarity=0.136 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC-C----CCCCCcEEEeeccChHH-hhc-------CCCcceEEecCCh------hhH
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS-I----ENLPGNVHIRKWIPQQD-VLA-------HPNCRLFISHGGV------NSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~-~----~~~~~~v~~~~~~~~~~-~l~-------~~~~d~~i~~gG~------~t~ 65 (124)
..+.+++.|.+.|++.++.+.++. . ....+ ++++.-..... .++ ..+..++++|.|. +.+
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~al~~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~v 92 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAASILFDEVEG-IDFVLTRHEFTAGVAADVLARITGRPQACWATLGPGMTNLSTGI 92 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGGTCCSCSSTT-CEEEECSSHHHHHHHHHHHHHHHCSCEEEEECTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcchhHHHHHHcC-CeEEeeCCHHHHHHHHHHHHHHHCCCEEEEEccCchHHHHHHHH
Confidence 457889999999998888776643 2 12223 66555433211 110 1456678999986 447
Q ss_pred HHHHHhCCCeeee
Q psy10186 66 LEAIHYGIPIIGV 78 (124)
Q Consensus 66 ~ea~~~g~P~l~~ 78 (124)
.||.+.++|+|++
T Consensus 93 ~~A~~~~~Pll~i 105 (573)
T 2iht_A 93 ATSVLDRSPVIAL 105 (573)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHhhCCCEEEE
Confidence 7999999999998
No 120
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=48.45 E-value=67 Score=23.92 Aligned_cols=73 Identities=14% Similarity=0.057 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccChH-Hhhc---C---CCcceEEecCCh------hh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIPQQ-DVLA---H---PNCRLFISHGGV------NS 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~~~-~~l~---~---~~~d~~i~~gG~------~t 64 (124)
..+.+++.|.+.|++.++.+.++.. .+ .+.++++.-.... ..++ + ....+++++.|. +.
T Consensus 5 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~-~~~i~~v~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~g 83 (566)
T 2vbi_A 5 VGMYLAERLVQIGLKHHFAVAGDYNLVLLDQLLL-NKDMKQIYCCNELNCGFSAEGYARSNGAAAAVVTFSVGAISAMNA 83 (566)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCTTTHHHHHHHHT-CTTSEEEECSSHHHHHHHHHHHHHHHSCEEEEECTTTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCccHHHHHHHhc-CCCCeEEeeCcHHHHHHHHHHHHhhcCCeEEEEeCCCCHHHHHHH
Confidence 3567889999999998888776541 11 2346665544321 1111 0 125668888885 56
Q ss_pred HHHHHHhCCCeeee
Q psy10186 65 ALEAIHYGIPIIGV 78 (124)
Q Consensus 65 ~~ea~~~g~P~l~~ 78 (124)
+.+|...++|+|++
T Consensus 84 ia~A~~~~vPll~i 97 (566)
T 2vbi_A 84 LGGAYAENLPVILI 97 (566)
T ss_dssp HHHHHHTTCCEEEE
T ss_pred HHHHHhhCCCEEEE
Confidence 78999999999998
No 121
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=48.33 E-value=22 Score=22.34 Aligned_cols=29 Identities=24% Similarity=0.154 Sum_probs=23.9
Q ss_pred CCcceEEe-----cCChhhHHHH---HHhCCCeeeec
Q psy10186 51 PNCRLFIS-----HGGVNSALEA---IHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~-----~gG~~t~~ea---~~~g~P~l~~P 79 (124)
..||++|- ....||..|. ...|||++++.
T Consensus 80 ~~aD~vVA~ldg~~~D~GTa~EiGyA~algKPVv~l~ 116 (167)
T 1s2d_A 80 SNATCGVFLYDMDQLDDGSAFXIGFMRAMHKPVILVP 116 (167)
T ss_dssp HHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HhCCEEEEECCCCCCCCCceeehhhHhhCCCeEEEEE
Confidence 78999877 4567899884 78899999995
No 122
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=48.25 E-value=42 Score=25.02 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=49.4
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCC----CC-CCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hhH
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIE----NL-PGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~----~~-~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t~ 65 (124)
..+.+++.|.+.|++.++.+.++... .. ...++++.-.... ..++ ..+..++++|.|. +.+
T Consensus 12 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~i~~i~~~~E~~Aa~~A~GyAr~tg~pgv~~~TsGpG~~N~~~~i 91 (568)
T 2c31_A 12 GFHVLIDALKMNDIDTMYGVVGIPITNLARMWQDDGQRFYSFRHEQHAGYAASIAGYIEGKPGVCLTVSAPGFLNGVTSL 91 (568)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHHTTCEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHhCCCcEEEeCcHHHHHHHHHHHHHHhCCCEEEEEcCCccHHHHHHHH
Confidence 35678999999999988887765411 00 1236655544321 1111 1455678999986 567
Q ss_pred HHHHHhCCCeeeec
Q psy10186 66 LEAIHYGIPIIGVP 79 (124)
Q Consensus 66 ~ea~~~g~P~l~~P 79 (124)
.||...++|+|++.
T Consensus 92 ~~A~~~~vPll~it 105 (568)
T 2c31_A 92 AHATTNCFPMILLS 105 (568)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHhcCCCEEEEc
Confidence 79999999999984
No 123
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.23 E-value=40 Score=19.58 Aligned_cols=108 Identities=10% Similarity=-0.028 Sum_probs=54.6
Q ss_pred HHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhc---CCCcceEEecCChh-----hHHHHHHhCCC
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLA---HPNCRLFISHGGVN-----SALEAIHYGIP 74 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~~gG~~-----t~~ea~~~g~P 74 (124)
..+++.|.+.|++++++-...+ .....-++. .......+.+. ...+|.+|.-.|.- .+..+-..+.+
T Consensus 19 ~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~-~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 19 VGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAV-IADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEE-ECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEE-ECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 4677888888888876654321 111122222 23333333221 15788877666531 22223344544
Q ss_pred eeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 75 IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 75 ~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
.++.- .....+...+.+.|+-.++.+ .......+.+.+..|
T Consensus 98 ~iia~--~~~~~~~~~l~~~G~~~vi~p----~~~~~~~l~~~i~~p 138 (141)
T 3llv_A 98 YAIVR--VSSPKKKEEFEEAGANLVVLV----ADAVKQAFMDKIKKM 138 (141)
T ss_dssp CEEEE--ESCGGGHHHHHHTTCSEEEEH----HHHHHHHHHHHHHHC
T ss_pred eEEEE--EcChhHHHHHHHcCCCEEECH----HHHHHHHHHHHHhCc
Confidence 44432 223345567788898888874 334444444444433
No 124
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=46.40 E-value=39 Score=19.18 Aligned_cols=48 Identities=10% Similarity=0.102 Sum_probs=31.5
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
...|+|++.-..+... .....+.|+--.+. +.++.++|...++++...
T Consensus 79 ~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l~-KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 79 FHLPTIVMASSSDIPT-AVRAMRASAADFIE-KPFIEHVLVHDVQQIING 126 (136)
T ss_dssp CCCCEEEEESSCCHHH-HHHHHHTTCSEEEE-SSBCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHH-HHHHHHcChHHhee-CCCCHHHHHHHHHHHHhc
Confidence 3678888755444433 34444666655554 457899999999998753
No 125
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=46.24 E-value=49 Score=22.99 Aligned_cols=16 Identities=19% Similarity=0.345 Sum_probs=7.5
Q ss_pred HHHHHHHHHhhCCCeE
Q psy10186 5 MRTLLVTAFSRTGLTV 20 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~ 20 (124)
.++.-.+.|++.|+++
T Consensus 31 ~~~~~~~~L~~~G~~v 46 (327)
T 4h1h_A 31 QVEIAVNRLTDMGFKV 46 (327)
T ss_dssp HHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHhCCCEE
Confidence 3444444455555444
No 126
>3ke2_A Uncharacterized protein YP_928783.1; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.50A {Shewanella amazonensis SB2B}
Probab=45.60 E-value=46 Score=19.72 Aligned_cols=46 Identities=20% Similarity=0.282 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeecc--ChHHhh
Q psy10186 1 MSDGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWI--PQQDVL 48 (124)
Q Consensus 1 l~~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~--~~~~~l 48 (124)
+|...++..+++|.++++.+..+-++ .....+.+++.+|= +..++.
T Consensus 45 mPRRTiQd~I~aL~elgI~~~FvQ~G--~R~n~GyY~I~dWG~idk~Wv~ 92 (117)
T 3ke2_A 45 MPRRTLQDAIASFADIGIEVEFVQDG--ERHNAGYYRIRTWGPISSAWMD 92 (117)
T ss_dssp CCHHHHHHHHHTGGGGTCEEEEECCT--TCCSCCEEEEEECTTBCHHHHH
T ss_pred CCHhHHHHHHHHhhhCCeEEEEEecc--ccCCCccEEEeecCccCHHHHH
Confidence 57888999999999999988776442 22334678889884 445544
No 127
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=45.45 E-value=5.8 Score=24.74 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhhCCCeEEE-EEcCCCCCCCCCcEEEeec--c--ChHHhhcCCCcceEEec---CChhhHHHH---HHhC
Q psy10186 4 GMRTLLVTAFSRTGLTVLW-RYEGDSIENLPGNVHIRKW--I--PQQDVLAHPNCRLFISH---GGVNSALEA---IHYG 72 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~-~~g~~~~~~~~~~v~~~~~--~--~~~~~l~~~~~d~~i~~---gG~~t~~ea---~~~g 72 (124)
..+..+.+.|++.| .++- -++.......... ....+ + ...+.+ ..||++|.- ...||..|. ...|
T Consensus 19 ~~~~~i~~~L~~~G-~Vl~~hv~~~~l~~~g~~-~~~~~~~i~~~d~~~i--~~aD~vvA~l~~~d~Gt~~EiG~A~alg 94 (152)
T 4fyk_A 19 ALYARIVSRLRRYG-KVLTEHVADAELEPLGEE-AAGGDQFIHEQNLNWL--QQADVVVAEVTQPSLGVGYELGRAVALG 94 (152)
T ss_dssp HHHHHHHHHHTTTS-EECCCC--------------CCCHHHHHHHHHHHH--HHCSEEEEECSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcC-cccccccCchhhhhcccc-ccCCHHHHHHHHHHHH--HHCCEEEEeCCCCCCCHHHHHHHHHHcC
Confidence 46788999999988 4321 1222111111000 00011 1 122234 678987665 467888884 7899
Q ss_pred CCeeeecccccHHHHHHHHHHcCc--eeE-ecCCCCCHHHHHHHHHHHhcC
Q psy10186 73 IPIIGVPFYGDQLSHVRHIVDLGA--GVE-LSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 73 ~P~l~~P~~~~q~~~a~~~~~~g~--g~~-~~~~~~~~~~l~~~l~~ll~~ 120 (124)
||++++-........+..+....- -+. ..+++ ++|.+.|.++++.
T Consensus 95 kPV~~l~~~~~~~~ls~mi~G~~~~~~~~~~~Y~~---~el~~il~~f~~~ 142 (152)
T 4fyk_A 95 KPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAE---GEVETMLDRYFEA 142 (152)
T ss_dssp CCEEEEECGGGSCCCCHHHHHHCCSSSEEEEECCT---TCHHHHHHHHHC-
T ss_pred CeEEEEEeCCccchhHHHHcCCCCCCeEEEEEecH---HHHHHHHHHHHHh
Confidence 999997332111112223333221 122 22232 7888888888754
No 128
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=44.81 E-value=70 Score=22.03 Aligned_cols=91 Identities=16% Similarity=0.093 Sum_probs=54.1
Q ss_pred HHHHHhhC-CCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-cc
Q psy10186 9 LVTAFSRT-GLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV-PF 80 (124)
Q Consensus 9 ~~~~l~~~-~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~-P~ 80 (124)
.+..+... +.+++.++..+.. ........+ |-+..+++..+.+|+++-..- .-.+..|+..|+++++= |.
T Consensus 23 ~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPl 100 (352)
T 3kux_A 23 HAPLIMGTPGLELAGVSSSDASKVHADWPAIPV--VSDPQMLFNDPSIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPF 100 (352)
T ss_dssp HHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCE--ESCHHHHHHCSSCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSC
T ss_pred HHHHHhhCCCcEEEEEECCCHHHHHhhCCCCce--ECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCC
Confidence 45566666 5677777766531 112223322 457788886667898644332 34567899999999985 65
Q ss_pred cc---cHHHHHHHHHHcCceeEec
Q psy10186 81 YG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 81 ~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
.. |-....+.+++.|.-+.+.
T Consensus 101 a~~~~e~~~l~~~a~~~g~~~~v~ 124 (352)
T 3kux_A 101 TVTLSQANALKEHADDAGLLLSVF 124 (352)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 43 2333445556667665554
No 129
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=44.63 E-value=45 Score=23.03 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=54.2
Q ss_pred HHHHHHhhC--CCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCee
Q psy10186 8 LLVTAFSRT--GLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPII 76 (124)
Q Consensus 8 ~~~~~l~~~--~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l 76 (124)
..+.++.+. +.+++.++..+... +.. ++ ..+.+..+++..+.+|+++--.- ...+.+++..|++++
T Consensus 27 ~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-~~--~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~ 103 (354)
T 3q2i_A 27 NHFGALEKHADRAELIDVCDIDPAALKAAVERT-GA--RGHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVM 103 (354)
T ss_dssp HHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-CC--EEESCHHHHHHHCCCSEEEECSCGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-CC--ceeCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCCEE
Confidence 456677666 56777777665311 011 22 33457777775457898654332 234678899999999
Q ss_pred ee-cccc---cHHHHHHHHHHcCceeEec
Q psy10186 77 GV-PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 77 ~~-P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
+- |... +-....+..++.|.-+.+.
T Consensus 104 ~EKP~a~~~~~~~~l~~~a~~~g~~~~v~ 132 (354)
T 3q2i_A 104 TEKPMATRWEDGLEMVKAADKAKKHLFVV 132 (354)
T ss_dssp ECSSSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 85 6543 2334455556667766554
No 130
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=44.17 E-value=10 Score=24.09 Aligned_cols=22 Identities=23% Similarity=0.344 Sum_probs=18.4
Q ss_pred ceEEecCChhhHHHHHHhCCCe
Q psy10186 54 RLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 54 d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
-++|+|||....+=+...|.|.
T Consensus 138 vlvVsHg~~ir~ll~~llg~~~ 159 (202)
T 3mxo_A 138 EIFICHANVIRYIVCRALQFPP 159 (202)
T ss_dssp EEEEECHHHHHHHHHHHTTCCG
T ss_pred EEEEeCHHHHHHHHHHHhCCCH
Confidence 3689999998888888888875
No 131
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=44.05 E-value=6.4 Score=16.48 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=12.6
Q ss_pred ChhhHHHHHHhCCCeee
Q psy10186 61 GVNSALEAIHYGIPIIG 77 (124)
Q Consensus 61 G~~t~~ea~~~g~P~l~ 77 (124)
|.|+++--+..|+|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 45677777888888765
No 132
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=42.97 E-value=40 Score=24.03 Aligned_cols=18 Identities=17% Similarity=0.132 Sum_probs=9.7
Q ss_pred HHHHHHHHHHhhCCCeEE
Q psy10186 4 GMRTLLVTAFSRTGLTVL 21 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i 21 (124)
+.++.-.+.|++.|++++
T Consensus 61 ~~~~~~~~~L~~~G~~v~ 78 (371)
T 3tla_A 61 NRFFRGVEFLQRKGFKLV 78 (371)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhCCCEEE
Confidence 344555555666665554
No 133
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=42.95 E-value=65 Score=21.29 Aligned_cols=29 Identities=14% Similarity=0.190 Sum_probs=18.3
Q ss_pred CCcceEEecCChhh---HHHHHHhCCCeeeec
Q psy10186 51 PNCRLFISHGGVNS---ALEAIHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~gG~~t---~~ea~~~g~P~l~~P 79 (124)
..+|++|..+...+ .++.+..|+|++.+-
T Consensus 70 ~~vdgiI~~~~~~~~~~~~~~l~~~iPvV~i~ 101 (303)
T 3kke_A 70 GRVDGVLLQRREDFDDDMLAAVLEGVPAVTIN 101 (303)
T ss_dssp CSSSEEEECCCTTCCHHHHHHHHTTSCEEEES
T ss_pred CCCcEEEEecCCCCcHHHHHHHhCCCCEEEEC
Confidence 67888777654322 344444499998873
No 134
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=42.91 E-value=57 Score=24.25 Aligned_cols=75 Identities=12% Similarity=0.201 Sum_probs=49.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCC----CC-CCcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hhH
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIE----NL-PGNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~----~~-~~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t~ 65 (124)
..+.+++.|.+.|++.++.+.++... .. ...++++.-.... ..++ ..+..+++++.|. +.+
T Consensus 10 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~i~~i~~~hE~~Aa~~A~Gyar~tg~pgv~~~TsGpG~~N~~~gi 89 (564)
T 2q28_A 10 GMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTAL 89 (564)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHHTTCEEEECSSHHHHHHHHHHHHHHHSSCEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCcchHHHHHHHHhCCCcEEeeCCHHHHHHHHHHHHHHhCCCEEEEEccCchHHHHHHHH
Confidence 45778999999999888887665311 00 1246655544321 1111 1455678999985 456
Q ss_pred HHHHHhCCCeeeec
Q psy10186 66 LEAIHYGIPIIGVP 79 (124)
Q Consensus 66 ~ea~~~g~P~l~~P 79 (124)
.||...++|+|++.
T Consensus 90 ~~A~~~~vPll~it 103 (564)
T 2q28_A 90 ANATVNGFPMIMIS 103 (564)
T ss_dssp HHHHHHTCCEEEEE
T ss_pred HHHHhcCCCEEEEe
Confidence 79999999999984
No 135
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=41.39 E-value=57 Score=23.46 Aligned_cols=49 Identities=18% Similarity=0.196 Sum_probs=31.6
Q ss_pred hhhHHHHHHhCCCeeeeccc--ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHH
Q psy10186 62 VNSALEAIHYGIPIIGVPFY--GDQLSHVRHIVDLGAGVELSYFNITLESIAWATS 115 (124)
Q Consensus 62 ~~t~~ea~~~g~P~l~~P~~--~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~ 115 (124)
..|.-.|+..|+|+.++|-. ..+..-.+++-+.|+..+. +.+++.+.+.
T Consensus 252 liTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~-----~~~Dil~~l~ 302 (382)
T 3maj_A 252 LITARRAADQGREVFAVPGSPLDPRAAGTNDLIKQGATLIT-----SASDIVEAVA 302 (382)
T ss_dssp HHHHHHHHHHTCCEEECCCCTTCGGGHHHHHHHHTTCEECS-----SHHHHHHHHT
T ss_pred HHHHHHHHHhCCcEEEEcCCCCCcccccHHHHHHCCCEEEC-----CHHHHHHHhh
Confidence 35666889999999999853 3344444555556754443 5666666554
No 136
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=40.48 E-value=47 Score=24.93 Aligned_cols=74 Identities=14% Similarity=0.087 Sum_probs=46.6
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccCh-HHh-----hc--CCCcceEEecCCh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQ-QDV-----LA--HPNCRLFISHGGV------N 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~-~~~-----l~--~~~~d~~i~~gG~------~ 63 (124)
..+.+++.|.+.|++.++.+.++. ..+..+.++++.-... ... ++ ..+..++++|.|. +
T Consensus 6 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~~i~~v~~~hE~~Aa~~A~GyAr~tg~p~v~~~TsGpG~~N~~~ 85 (589)
T 2pgn_A 6 GADLIVEALEEYGTEQVVGFIGHTSHFVADAFSKSHLGKRVINPATELGGAWMVNGYNYVKDRSAAVGAWHCVGNLLLHA 85 (589)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSGGGHHHHHHHHTSTTSTTCBCCSSHHHHHHHHHHHHHHHTSCCEEEEEEGGGGGGCHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCchHHHHHHHHhcCCCCeEEEeCcHHHHHHHHHHHHHHHCCCEEEEEecCchHHHHHH
Confidence 346788999999998888876653 1111023443332221 111 10 1455678888874 5
Q ss_pred hHHHHHHhCCCeeee
Q psy10186 64 SALEAIHYGIPIIGV 78 (124)
Q Consensus 64 t~~ea~~~g~P~l~~ 78 (124)
.+.||.+.++|+|++
T Consensus 86 gv~~A~~~~vPll~i 100 (589)
T 2pgn_A 86 AMQEARTGRIPAVHI 100 (589)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 678999999999998
No 137
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=39.93 E-value=93 Score=21.65 Aligned_cols=78 Identities=14% Similarity=0.026 Sum_probs=45.3
Q ss_pred ccChHHhhcCCCcceEEe-cC---ChhhHHHHHHhCCCeeee-ccccc---HHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy10186 41 WIPQQDVLAHPNCRLFIS-HG---GVNSALEAIHYGIPIIGV-PFYGD---QLSHVRHIVDLGAGVELSYFNITLESIAW 112 (124)
Q Consensus 41 ~~~~~~~l~~~~~d~~i~-~g---G~~t~~ea~~~g~P~l~~-P~~~~---q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ 112 (124)
|-+..+++..+..|+++- .+ -.-.+.+|+..||++++= |...+ -....+..++.|.-+.+... ....-...
T Consensus 72 ~~~~~~ll~~~~iD~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~-~r~~p~~~ 150 (383)
T 3oqb_A 72 TTDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQD-KLFLPGLK 150 (383)
T ss_dssp ESCHHHHHHCSSCCEEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCG-GGGSHHHH
T ss_pred cCCHHHHhcCCCCCEEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEec-cccCHHHH
Confidence 457788887677898653 32 235578999999998863 66532 33344555666765555421 12222333
Q ss_pred HHHHHhc
Q psy10186 113 ATSIVLN 119 (124)
Q Consensus 113 ~l~~ll~ 119 (124)
.+++++.
T Consensus 151 ~~~~~i~ 157 (383)
T 3oqb_A 151 KIAFLRD 157 (383)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555543
No 138
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=38.61 E-value=1.2e+02 Score=22.48 Aligned_cols=102 Identities=13% Similarity=-0.024 Sum_probs=53.2
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhc---CCCcceEEecCCh-----hhHHHHHHhCCCeeee
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLA---HPNCRLFISHGGV-----NSALEAIHYGIPIIGV 78 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~~gG~-----~t~~ea~~~g~P~l~~ 78 (124)
..+++.|.+.+..++++-...+..+....+..-+-.+ .+.|. -..+|.+|.-.|. -+++-+-..|.+.-++
T Consensus 361 ~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~-~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 361 CAAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATV-GQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIV 439 (565)
T ss_dssp HHHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSS-STHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred HHHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCC-HHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEE
Confidence 4566777777777766654433222222333333333 22221 2788988777763 3344455556552232
Q ss_pred cccccHHHHHHHHHHcCceeEecCCCCCHHHH
Q psy10186 79 PFYGDQLSHVRHIVDLGAGVELSYFNITLESI 110 (124)
Q Consensus 79 P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l 110 (124)
-+. ....+++.+.+.|+-.++.+.......+
T Consensus 440 ar~-~~~~~~~~l~~~G~d~vi~p~~~~~~~i 470 (565)
T 4gx0_A 440 ARA-NGEENVDQLYAAGADFVVSNASVGANIL 470 (565)
T ss_dssp EEE-SSTTSHHHHHHHTCSEEEEHHHHHHHHH
T ss_pred EEE-CCHHHHHHHHHcCCCEEEccchHHHHHH
Confidence 222 2223566677888888877543333333
No 139
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=38.49 E-value=56 Score=21.29 Aligned_cols=70 Identities=13% Similarity=0.112 Sum_probs=40.9
Q ss_pred CCcce-EEecCChhhHH-----------HH--HH--hCCCeeeeccccc----H---HHHHHHHHHcCceeEecCCC---
Q psy10186 51 PNCRL-FISHGGVNSAL-----------EA--IH--YGIPIIGVPFYGD----Q---LSHVRHIVDLGAGVELSYFN--- 104 (124)
Q Consensus 51 ~~~d~-~i~~gG~~t~~-----------ea--~~--~g~P~l~~P~~~~----q---~~~a~~~~~~g~g~~~~~~~--- 104 (124)
..+|+ +|..+.++|+. .+ .+ .++|++++|..+. . ..|.+.+.+.|+-++ .+..
T Consensus 95 ~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~iv-pP~~g~l 173 (209)
T 1mvl_A 95 RWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLI-PPIKKRL 173 (209)
T ss_dssp HHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEEC-CCBC---
T ss_pred ccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEe-CCccccc
Confidence 46787 57777665543 21 11 2799999998432 1 234445566665433 2221
Q ss_pred ----------CCHHHHHHHHHHHhcCC
Q psy10186 105 ----------ITLESIAWATSIVLNNP 121 (124)
Q Consensus 105 ----------~~~~~l~~~l~~ll~~~ 121 (124)
.+.++|.+.+.+.+...
T Consensus 174 acg~~G~gr~~~~~~Iv~~v~~~l~~~ 200 (209)
T 1mvl_A 174 ASGDYGNGAMAEPSLIYSTVRLFWESQ 200 (209)
T ss_dssp ------CCBCCCHHHHHHHHHHHHHHC
T ss_pred cCCCcCCCCCCCHHHHHHHHHHHhCCC
Confidence 25778888887776543
No 140
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=38.39 E-value=72 Score=19.91 Aligned_cols=48 Identities=17% Similarity=0.158 Sum_probs=28.1
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
..+|+|++.-..+.........+.|+--.+.+ .++ +|.++|++++...
T Consensus 150 ~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~K-P~~--~L~~~i~~~l~~~ 197 (206)
T 3mm4_A 150 VRTPIIAVSGHDPGSEEARETIQAGMDAFLDK-SLN--QLANVIREIESKR 197 (206)
T ss_dssp CCCCEEEEESSCCCHHHHHHHHHHTCSEEEET-TCT--THHHHHHHHC---
T ss_pred CCCcEEEEECCCCcHHHHHHHHhCCCCEEEcC-cHH--HHHHHHHHHHhhh
Confidence 46899888655523344455556666544432 344 8888898887543
No 141
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=37.73 E-value=56 Score=18.50 Aligned_cols=50 Identities=8% Similarity=-0.057 Sum_probs=31.9
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+.. ....+.+.|+--.+. +.++.++|..++++++....
T Consensus 80 ~~~~ii~ls~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~ 129 (140)
T 3lua_A 80 ANTPVIIATKSDNPG-YRHAALKFKVSDYIL-KPYPTKRLENSVRSVLKICQ 129 (140)
T ss_dssp TTCCEEEEESCCCHH-HHHHHHHSCCSEEEE-SSCCTTHHHHHHHHHHCC--
T ss_pred CCCCEEEEeCCCCHH-HHHHHHHcCCCEEEE-CCCCHHHHHHHHHHHHHhcc
Confidence 478888875544443 344445666554554 34678899999999986543
No 142
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=36.38 E-value=1.1e+02 Score=21.31 Aligned_cols=91 Identities=18% Similarity=0.170 Sum_probs=54.5
Q ss_pred HHHHHhhCCCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-
Q psy10186 9 LVTAFSRTGLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV- 78 (124)
Q Consensus 9 ~~~~l~~~~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~- 78 (124)
++..+...+.+++.++..+... +..+.. .-|.+..+++..+.+|+++-..- .-.+..|+..|+++++=
T Consensus 42 ~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~--~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EK 119 (361)
T 3u3x_A 42 QVNCLLRAGARLAGFHEKDDALAAEFSAVYADA--RRIATAEEILEDENIGLIVSAAVSSERAELAIRAMQHGKDVLVDK 119 (361)
T ss_dssp HHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSC--CEESCHHHHHTCTTCCEEEECCCHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCC--cccCCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeC
Confidence 4455555678888888765311 111111 22457788886667899765443 24467899999999985
Q ss_pred ccccc---HHHHHHHHHHcCceeEec
Q psy10186 79 PFYGD---QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 P~~~~---q~~~a~~~~~~g~g~~~~ 101 (124)
|...+ -....+..++.|.-+.+.
T Consensus 120 Pla~~~~ea~~l~~~a~~~g~~l~v~ 145 (361)
T 3u3x_A 120 PGMTSFDQLAKLRRVQAETGRIFSIL 145 (361)
T ss_dssp CSCSSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEe
Confidence 76532 233444455556665554
No 143
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=36.35 E-value=38 Score=20.94 Aligned_cols=29 Identities=14% Similarity=0.171 Sum_probs=22.8
Q ss_pred CCcceEEec-----CChhhHHHH---HHhCCCeeeec
Q psy10186 51 PNCRLFISH-----GGVNSALEA---IHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~-----gG~~t~~ea---~~~g~P~l~~P 79 (124)
..||++|.- ...||..|. ...|||++++-
T Consensus 77 ~~aD~vvA~ldg~~~D~GT~~EiGyA~A~gkPVv~~~ 113 (157)
T 1f8y_A 77 KTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVI 113 (157)
T ss_dssp HTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhCCEEEEEcCCCCCCccHHHHHHHHHHCCCeEEEEE
Confidence 789997544 357999984 88999999983
No 144
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=36.16 E-value=55 Score=22.69 Aligned_cols=17 Identities=6% Similarity=0.071 Sum_probs=8.3
Q ss_pred HHHHHHHHHhhCCCeEE
Q psy10186 5 MRTLLVTAFSRTGLTVL 21 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i 21 (124)
.++...+.|++.|++++
T Consensus 33 ~~~~~~~~L~~~G~~v~ 49 (311)
T 1zl0_A 33 VLEATLRQLEVHGVDYH 49 (311)
T ss_dssp HHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhCCCEEE
Confidence 34444455555555443
No 145
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=36.05 E-value=52 Score=18.38 Aligned_cols=50 Identities=24% Similarity=0.041 Sum_probs=29.3
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
..|++++....+. .......+.|+--.+. +.++.+++.++++.++....+
T Consensus 74 ~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-kp~~~~~l~~~i~~~~~~~~~ 123 (134)
T 3f6c_A 74 SGIIIIVSAKNDH-FYGKHCADAGANGFVS-KKEGMNNIIAAIEAAKNGYCY 123 (134)
T ss_dssp CSEEEEEECC----CTHHHHHHTTCSEEEE-GGGCTHHHHHHHHHHHTTCCB
T ss_pred CCeEEEEeCCCCh-HHHHHHHHhCCCEEEe-CCCCHHHHHHHHHHHHCCCEE
Confidence 5677766433332 2334445566554444 246789999999999866543
No 146
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=35.95 E-value=58 Score=18.18 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=35.2
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+++.+.. ..|++++....+.. ......+.|+--.+. +.++.+++...++.++..
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 68 DLVKKVRSDSRFKEIPIIMITAEGGKA-EVITALKAGVNNYIV-KPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp HHHHHHHTSTTCTTCCEEEEESCCSHH-HHHHHHHHTCCEEEE-SCCCHHHHHHHHHHHHCC
T ss_pred HHHHHHHhcCCCCCCeEEEEeCCCChH-HHHHHHHcCccEEEe-CCCCHHHHHHHHHHHhcc
Confidence 45555553 57888875544443 334445566554444 457899999999998864
No 147
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=35.75 E-value=64 Score=18.58 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=35.8
Q ss_pred hHHHHHHh---CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIHY---GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~~---g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+++.+.. .+|+|++....+... ...+.+.|+--.+. +.++.++|..+|++++....
T Consensus 83 ~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~~ 142 (150)
T 4e7p_A 83 EVLEWIRSEKLETKVVVVTTFKRAGY-FERAVKAGVDAYVL-KERSIADLMQTLHTVLEGRK 142 (150)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHH-HHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCeEEEEeCCCCHHH-HHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHcCCE
Confidence 34444443 677777754444433 44445566654554 45689999999999987654
No 148
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=35.50 E-value=66 Score=18.69 Aligned_cols=55 Identities=16% Similarity=0.121 Sum_probs=34.3
Q ss_pred hHHHHHH-----hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 64 SALEAIH-----YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 64 t~~ea~~-----~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+++.+. ..+|+|++....+... ...+.+.|+--.+. +.++.+++...+++++..
T Consensus 68 ~~~~~lr~~~~~~~~pii~~s~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 68 ALCRWLKGQPDLRTIPVILLTILSDPRD-VVRSLECGADDFIT-KPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp HHHHHHHHSTTTTTSCEEEEECCCSHHH-HHHHHHHCCSEEEE-SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCcCCCCEEEEECCCChHH-HHHHHHCCCCEEEe-CCCCHHHHHHHHHHHHHH
Confidence 4455554 4678888755444433 34444566654444 457899999999988743
No 149
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=35.23 E-value=71 Score=19.94 Aligned_cols=58 Identities=10% Similarity=-0.118 Sum_probs=29.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~ 63 (124)
.+-.-.+.|++.|+++..+...........++.+.......++-. ...|+++-.||.+
T Consensus 23 E~~~p~~~l~~ag~~V~~~s~~~~~v~~~~G~~v~~d~~l~~v~~-~~yD~liiPGG~g 80 (177)
T 4hcj_A 23 EYFESKKIFESAGYKTKVSSTFIGTAQGKLGGMTNIDLLFSEVDA-VEFDAVVFVGGIG 80 (177)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSSEEEEETTSCEEEECEEGGGCCG-GGCSEEEECCSGG
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCeEeeCCCCEEecCccHHHCCH-hHCCEEEECCCcc
Confidence 344556788888988876653322111122333333222232211 3457777777754
No 150
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A
Probab=34.83 E-value=30 Score=21.02 Aligned_cols=23 Identities=26% Similarity=-0.021 Sum_probs=18.1
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 102 ~vlvV~H~~~i~~l~~~l~~~~~ 124 (161)
T 1ujc_A 102 SVLVISHLPLVGYLVAELCPGET 124 (161)
T ss_dssp EEEEEECTTHHHHHHHHHSTTCC
T ss_pred eEEEEeCHHHHHHHHHHHhCCCC
Confidence 44689999998877777777775
No 151
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus}
Probab=34.59 E-value=17 Score=23.28 Aligned_cols=23 Identities=30% Similarity=0.491 Sum_probs=18.8
Q ss_pred CcceEEecCChhhHHHHHHhCCC
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
..-++|+|||....+-+...|.|
T Consensus 142 ~~vlvVsHg~~i~~l~~~l~g~~ 164 (213)
T 3hjg_A 142 DNLLIVTHGGVIRIILAHVLGVD 164 (213)
T ss_dssp SCEEEEECHHHHHHHHHHHTTCC
T ss_pred CeEEEEeCHHHHHHHHHHHhCCC
Confidence 44578999999888888888887
No 152
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=34.59 E-value=65 Score=18.27 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=30.8
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNP 121 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~ 121 (124)
.+|+|++.-..+.. ......+.|+--.+. +.++.++|...+++++...
T Consensus 78 ~~pii~~t~~~~~~-~~~~~~~~ga~~~l~-KP~~~~~L~~~i~~~l~~~ 125 (136)
T 3t6k_A 78 TLPILMLTAQGDIS-AKIAGFEAGANDYLA-KPFEPQELVYRVKNILART 125 (136)
T ss_dssp TCCEEEEECTTCHH-HHHHHHHHTCSEEEE-TTCCHHHHHHHHHHHHHC-
T ss_pred CccEEEEecCCCHH-HHHHHHhcCcceEEe-CCCCHHHHHHHHHHHHhcc
Confidence 67888875544443 334444556554444 4578999999999987543
No 153
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=34.57 E-value=42 Score=23.18 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=29.4
Q ss_pred hhHHHHHHhCCCeeeecccc--cHHHHHHHHHHcCceeEecCCCCCHHHHHH
Q psy10186 63 NSALEAIHYGIPIIGVPFYG--DQLSHVRHIVDLGAGVELSYFNITLESIAW 112 (124)
Q Consensus 63 ~t~~ea~~~g~P~l~~P~~~--~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~ 112 (124)
.|.-.|+..|+|+.++|-.. .+..-..++-+.|+..+. +.+++.+
T Consensus 232 iTA~~Ale~gR~VfavPG~i~~~~s~G~n~LI~~GA~lv~-----~~~Dil~ 278 (288)
T 3uqz_A 232 ITCERAMEEGRDVFAIPGSILDGLSDGCHHLIQEGAKLVT-----SGQDVLA 278 (288)
T ss_dssp HHHHHHHHTTCEEEECCCCSSSSTTHHHHHHHHTTCEECS-----SHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCCccchHHHHHHHCCCEEEC-----CHHHHHH
Confidence 57778899999999998642 333334445566854443 5666554
No 154
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A*
Probab=33.47 E-value=19 Score=23.48 Aligned_cols=23 Identities=22% Similarity=0.190 Sum_probs=17.9
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 175 ~vlvVsHg~~i~~l~~~l~~~~~ 197 (240)
T 1qhf_A 175 TVMIAAHGNSLRGLVKHLEGISD 197 (240)
T ss_dssp CEEEEECHHHHHHHHHHHHTCCT
T ss_pred EEEEEeCHHHHHHHHHHHhCCCH
Confidence 34789999998887777777764
No 155
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=33.16 E-value=1e+02 Score=21.03 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=50.1
Q ss_pred HHHHhhCCCeEEEEEcCCCC-CC-----C--CCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeee
Q psy10186 10 VTAFSRTGLTVLWRYEGDSI-EN-----L--PGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIG 77 (124)
Q Consensus 10 ~~~l~~~~~~~i~~~g~~~~-~~-----~--~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~ 77 (124)
++++ ..+.+++.++..+.. .. . .-++....|-+..+++..+..|+++-..-. -.+..|+..|+++++
T Consensus 18 ~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~ 96 (337)
T 3ip3_A 18 LEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLNGKILLEALERKIHAFV 96 (337)
T ss_dssp HTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchHHHHHHHHHHCCCcEEE
Confidence 3344 345678777765431 10 0 001112245677888865678886544433 237789999999887
Q ss_pred e-cccc---cHHHHHHHHHHcCce
Q psy10186 78 V-PFYG---DQLSHVRHIVDLGAG 97 (124)
Q Consensus 78 ~-P~~~---~q~~~a~~~~~~g~g 97 (124)
= |... |-....+..++.|.-
T Consensus 97 EKPla~~~~ea~~l~~~a~~~g~~ 120 (337)
T 3ip3_A 97 EKPIATTFEDLEKIRSVYQKVRNE 120 (337)
T ss_dssp CSSSCSSHHHHHHHHHHHHHHTTT
T ss_pred eCCCCCCHHHHHHHHHHHHHhCCc
Confidence 4 7754 334445555666755
No 156
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum}
Probab=33.04 E-value=19 Score=23.10 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=17.2
Q ss_pred ceEEecCChhhHHHHHHhCCCe
Q psy10186 54 RLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 54 d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
-++|+|||....+=+...|.|.
T Consensus 150 vlvVsHg~~i~~ll~~llg~~~ 171 (214)
T 3eoz_A 150 QLVICHGNVIRYFLCRALQIPL 171 (214)
T ss_dssp EEEEECHHHHHHHHHHHHTCCH
T ss_pred EEEEeCcHHHHHHHHHHhCCCH
Confidence 3689999988877777777763
No 157
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=31.70 E-value=75 Score=20.67 Aligned_cols=66 Identities=15% Similarity=0.039 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh----h-HHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN----S-ALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~----t-~~ea~~~g~P~l~~P 79 (124)
.+..+.+++.+.|+.+++.....+.. ........+....+|++|..+... . +-++...|+|++.+-
T Consensus 26 ~~~gi~~~a~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~ 96 (293)
T 3l6u_A 26 LINAFKAEAKANKYEALVATSQNSRI---------SEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAID 96 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCHH---------HHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCHH---------HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEec
Confidence 34455556667788887764332111 001111112226788877655422 2 334456799999873
No 158
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=31.64 E-value=71 Score=21.47 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=29.9
Q ss_pred CCcEEEeeccChHHhhcC--CCcceEEecCChh---hHHHHHHhCCCeeee
Q psy10186 33 PGNVHIRKWIPQQDVLAH--PNCRLFISHGGVN---SALEAIHYGIPIIGV 78 (124)
Q Consensus 33 ~~~v~~~~~~~~~~~l~~--~~~d~~i~~gG~~---t~~ea~~~g~P~l~~ 78 (124)
.+.|.+...+...++... .++.++|+--|.. +.+=|-.+|+|.|+-
T Consensus 154 ~~~ILVa~~l~Ps~~~~l~~~~~~givt~~Gg~tSH~AIlAR~lgIPavvg 204 (258)
T 1zym_A 154 DEVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVG 204 (258)
T ss_dssp SCEEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEECC
T ss_pred CCeEEEECCCCHHHHHhhchhhcEEEEEcCCCcccHHHHHHHHcCCCEEEe
Confidence 345677777766665432 3677888855433 344567899999984
No 159
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=31.31 E-value=70 Score=17.68 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=35.2
Q ss_pred hHHHHHH-----hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 64 SALEAIH-----YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 64 t~~ea~~-----~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
.+++.+. ...|++++.-..+ ........+.|+--.+. +.++.+++...+++++.
T Consensus 63 ~~~~~l~~~~~~~~~pii~~s~~~~-~~~~~~~~~~Ga~~~l~-KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 63 TVLKKLQEKEEWKRIPVIVLTAKGG-EEDESLALSLGARKVMR-KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp HHHHHHHTSTTTTTSCEEEEESCCS-HHHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccccCCCEEEEecCCc-hHHHHHHHhcChhhhcc-CCCCHHHHHHHHHHHhc
Confidence 4555553 3578888754443 34445556677665554 45789999999998874
No 160
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A
Probab=31.04 E-value=21 Score=23.45 Aligned_cols=24 Identities=29% Similarity=0.219 Sum_probs=18.8
Q ss_pred CcceEEecCChhhHHHHHHhCCCe
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
..=++|+|||....+-+...|.|.
T Consensus 183 ~~vlvVsHg~~i~~ll~~l~g~~~ 206 (257)
T 3gp3_A 183 KQVLIAAHGNSLRALIKYLDGISD 206 (257)
T ss_dssp CCEEEEECHHHHHHHHHHHTTCCT
T ss_pred CEEEEEeCcHHHHHHHHHHhCCCH
Confidence 345689999998888787888763
No 161
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A*
Probab=31.04 E-value=21 Score=23.32 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=18.0
Q ss_pred CcceEEecCChhhHHHHHHhCCCe
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
..-++|+|||....+-+...|.|.
T Consensus 176 ~~vlvVsHg~~i~~l~~~l~~~~~ 199 (249)
T 1e58_A 176 ERVIIAAHGNSLRALVKYLDNMSE 199 (249)
T ss_dssp CCEEEEECHHHHHHHHHHHTTCCH
T ss_pred CEEEEEcChHHHHHHHHHHhCCCH
Confidence 345799999988777777777663
No 162
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A
Probab=31.04 E-value=21 Score=23.43 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=17.8
Q ss_pred CcceEEecCChhhHHHHHHhCCC
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
..=++|+|||....+-+...|.|
T Consensus 185 ~~vlvVsHg~~i~~l~~~l~~~~ 207 (258)
T 3kkk_A 185 KKVMVAAHGNSLRGLVKHLDNLS 207 (258)
T ss_dssp CCEEEEECHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCHHHHHHHHHHHhCCC
Confidence 34578999998888777777766
No 163
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.93 E-value=1.1e+02 Score=20.04 Aligned_cols=57 Identities=21% Similarity=0.173 Sum_probs=37.4
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhc-----CCCcceEEecCCh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLA-----HPNCRLFISHGGV 62 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~-----~~~~d~~i~~gG~ 62 (124)
.=.++++++.+.|.+++.+.++.... .+..+.+.+.....+.+. ...+|++|+.+|.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~~l~-~~~g~~~~dv~~~~~~~~~v~~~~~~~Dili~~Aav 97 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPVSLP-TPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAV 97 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCCCC-CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBC
T ss_pred HHHHHHHHHHHCCCEEEEEECCcccc-cCCCCeEEccCcHHHHHHHHHHhcCCCCEEEECCcc
Confidence 44678899999999998887765332 244555555544333221 1568999999874
No 164
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=30.50 E-value=1.3e+02 Score=20.61 Aligned_cols=83 Identities=13% Similarity=0.098 Sum_probs=50.1
Q ss_pred CCeEEEEEcCCCCCC-----CCCcEEEeeccChHHhhcCCCcceE-EecCC---hhhHHHHHHhCCCeeee-cccc---c
Q psy10186 17 GLTVLWRYEGDSIEN-----LPGNVHIRKWIPQQDVLAHPNCRLF-ISHGG---VNSALEAIHYGIPIIGV-PFYG---D 83 (124)
Q Consensus 17 ~~~~i~~~g~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~~-i~~gG---~~t~~ea~~~g~P~l~~-P~~~---~ 83 (124)
+.+++.++..+.... ..+.- .-|-+..+++..+..|+| |+..- .-.+..|+..||++++= |... |
T Consensus 56 ~~~lvav~d~~~~~a~~~a~~~g~~--~~y~d~~ell~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~e 133 (393)
T 4fb5_A 56 RPRLVHLAEANAGLAEARAGEFGFE--KATADWRALIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYAD 133 (393)
T ss_dssp CCEEEEEECC--TTHHHHHHHHTCS--EEESCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHH
T ss_pred CcEEEEEECCCHHHHHHHHHHhCCC--eecCCHHHHhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHH
Confidence 357777877654210 11111 134578888877788986 44442 35578899999999995 7653 3
Q ss_pred HHHHHHHHHHcCceeEec
Q psy10186 84 QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 84 q~~~a~~~~~~g~g~~~~ 101 (124)
-....+..++.|.-+.+.
T Consensus 134 a~~l~~~a~~~g~~l~vg 151 (393)
T 4fb5_A 134 AERMLATAERSGKVAALG 151 (393)
T ss_dssp HHHHHHHHHHSSSCEEEC
T ss_pred HHHhhhhHHhcCCccccc
Confidence 344455556667666654
No 165
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=30.50 E-value=1.3e+02 Score=20.52 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=54.1
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCC-----CCCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeee
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSI-----ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIG 77 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~ 77 (124)
.++..+.+. +.+++.++..+.. .+..+ +. .+-+..+++..+.+|+++.-.-. -.+.+++..|+++++
T Consensus 18 ~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g-~~--~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 18 VHAANIAANPDLELVVIADPFIEGAQRLAEANG-AE--AVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALC 94 (344)
T ss_dssp HHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTT-CE--EESSHHHHTTCSCCCEEEECSCGGGHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcC-Cc--eeCCHHHHhcCCCCCEEEEeCCchhhHHHHHHHHHcCCcEEE
Confidence 456677766 5677777766531 11112 22 34567777754588987654433 346788999999988
Q ss_pred e-ccccc---HHHHHHHHHHcCceeEec
Q psy10186 78 V-PFYGD---QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 78 ~-P~~~~---q~~~a~~~~~~g~g~~~~ 101 (124)
- |...+ -....+.+++.|.-+.+.
T Consensus 95 EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 95 EKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp CSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred ECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 5 65432 233445555567655554
No 166
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=30.23 E-value=23 Score=23.94 Aligned_cols=60 Identities=23% Similarity=0.277 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeecc---ChHHhhc-CCCcceEEecCChhhHHHHHH
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWI---PQQDVLA-HPNCRLFISHGGVNSALEAIH 70 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~---~~~~~l~-~~~~d~~i~~gG~~t~~ea~~ 70 (124)
+.+..+++.+.+.+..+++-.+.... +. ..+. ....++. ++...+++.|+|.....+++.
T Consensus 138 ~~~~~~~~~a~e~glpv~iH~~~~~~---~~----~~~~~p~~~~~v~~~~P~l~ivl~H~G~~~~~~~~~ 201 (291)
T 3irs_A 138 RRLYPLYAFCEDNGIPVIMMTGGNAG---PD----ITYTNPEHIDRVLGDFPDLTVVSSHGNWPWVQEIIH 201 (291)
T ss_dssp GGGHHHHHHHHHTTCCEEEECSSSCS---SS----GGGGCHHHHHHHHHHCTTCCEEEEGGGTTCHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEeCCCCCC---CC----CccCCHHHHHHHHHHCCCCEEEeecCCcccHHHHHH
Confidence 34555666666666655555543210 00 0111 1222332 378889999999876666655
No 167
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=30.08 E-value=1.4e+02 Score=20.84 Aligned_cols=91 Identities=10% Similarity=0.121 Sum_probs=54.7
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeee
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIG 77 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~ 77 (124)
..+..+... +.+++.++..+... +.. ++. .+-+..+++..+.+|+++--.-. -.+..++..|+++++
T Consensus 17 ~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-g~~--~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~al~aGk~Vl~ 93 (387)
T 3moi_A 17 LMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-GIP--VFATLAEMMQHVQMDAVYIASPHQFHCEHVVQASEQGLHIIV 93 (387)
T ss_dssp THHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-TCC--EESSHHHHHHHSCCSEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-CCC--eECCHHHHHcCCCCCEEEEcCCcHHHHHHHHHHHHCCCceee
Confidence 345666665 46777777665310 011 222 34567787765678997554432 357789999999998
Q ss_pred e-cccc---cHHHHHHHHHHcCceeEec
Q psy10186 78 V-PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 78 ~-P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
= |... +-....+..++.|.-+.+.
T Consensus 94 EKP~a~~~~e~~~l~~~a~~~g~~~~v~ 121 (387)
T 3moi_A 94 EKPLTLSRDEADRMIEAVERAGVHLVVG 121 (387)
T ss_dssp CSCCCSCHHHHHHHHHHHHHHTCCEEEC
T ss_pred eCCccCCHHHHHHHHHHHHHhCCeEEEE
Confidence 5 6543 3344455556667766554
No 168
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=30.03 E-value=70 Score=22.18 Aligned_cols=57 Identities=5% Similarity=0.005 Sum_probs=34.0
Q ss_pred ChHHhhcCCCcceEEe-cCCh-------hhHHHHHHhCCCeeee---cccccHHHHHHHHHHcCceeEe
Q psy10186 43 PQQDVLAHPNCRLFIS-HGGV-------NSALEAIHYGIPIIGV---PFYGDQLSHVRHIVDLGAGVEL 100 (124)
Q Consensus 43 ~~~~~l~~~~~d~~i~-~gG~-------~t~~ea~~~g~P~l~~---P~~~~q~~~a~~~~~~g~g~~~ 100 (124)
+..+++ .+..|+++- .++. --+.+++..|+++++. |...+-....+..++.|.-...
T Consensus 78 d~~~ll-~~~iDvVv~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ 145 (331)
T 3c8m_A 78 SASEAL-ARDFDIVVDATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRY 145 (331)
T ss_dssp CHHHHH-HSSCSEEEECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEEC
T ss_pred CHHHHh-CCCCCEEEECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEE
Confidence 566777 578898644 4441 2466899999999984 4322223333444455655444
No 169
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=29.71 E-value=99 Score=19.94 Aligned_cols=65 Identities=11% Similarity=0.115 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh----h-HHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN----S-ALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~----t-~~ea~~~g~P~l~~ 78 (124)
.+..+-+++.+.|+.+++.....+.. ......+.+...++|++|-.+... . +-++...|+|++.+
T Consensus 19 ~~~gi~~~~~~~g~~~~~~~~~~~~~---------~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 19 LKDGAQKEADKLGYNLVVLDSQNNPA---------KELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITL 88 (271)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTCHH---------HHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCcEEEEeCCCCCHH---------HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEe
Confidence 34444555667788887754322111 001111222226788877654321 1 33344579999987
No 170
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=29.69 E-value=78 Score=17.71 Aligned_cols=50 Identities=10% Similarity=0.064 Sum_probs=32.4
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+ ........+.|+--.+. +.++.++|.+.+++++....
T Consensus 79 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~l~~~l~~~~~~~~ 128 (140)
T 2qr3_A 79 RDLPVVLFTAYAD-IDLAVRGIKEGASDFVV-KPWDNQKLLETLLNAASQAK 128 (140)
T ss_dssp TTCCEEEEEEGGG-HHHHHHHHHTTCCEEEE-ESCCHHHHHHHHHHHHTCC-
T ss_pred cCCCEEEEECCCC-HHHHHHHHHcCchheee-CCCCHHHHHHHHHHHHHhcc
Confidence 4788888744333 33444555667654444 35689999999999886543
No 171
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=29.56 E-value=98 Score=20.45 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh-----hHHHHHHhCCCeeee
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN-----SALEAIHYGIPIIGV 78 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~-----t~~ea~~~g~P~l~~ 78 (124)
+.+..+.+++.+.|+.+++.....+.. ......+.+...++|++|..+... .+-++...|+|++.+
T Consensus 19 ~~~~gi~~~a~~~g~~~~~~~~~~~~~---------~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 19 KDRDIFVKKAESLGAKVFVQSANGNEE---------TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECTTCHH---------HHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCHH---------HHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEE
Confidence 455666677778898888765432211 001111111126788877665432 233445679999987
Q ss_pred c
Q psy10186 79 P 79 (124)
Q Consensus 79 P 79 (124)
-
T Consensus 90 ~ 90 (313)
T 3m9w_A 90 D 90 (313)
T ss_dssp S
T ss_pred C
Confidence 3
No 172
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=29.21 E-value=87 Score=20.32 Aligned_cols=29 Identities=17% Similarity=0.115 Sum_probs=19.8
Q ss_pred CCcceEEecCCh--------hhHHHHHHhCCCeeeec
Q psy10186 51 PNCRLFISHGGV--------NSALEAIHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~gG~--------~t~~ea~~~g~P~l~~P 79 (124)
.++|++|..+.. ..+.++...|+|++.+-
T Consensus 70 ~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 70 QHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMIN 106 (298)
T ss_dssp TCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEES
T ss_pred CCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEe
Confidence 678888776542 22345567899999873
No 173
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=29.14 E-value=1.4e+02 Score=20.32 Aligned_cols=94 Identities=11% Similarity=0.014 Sum_probs=52.8
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCCC--CCCCcEEE-eeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSIE--NLPGNVHI-RKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV- 78 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~~--~~~~~v~~-~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~- 78 (124)
.++.++... +.+++.++..+... ......-+ ..+-+..+++..+.+|+++-..- .-.+.+++..|+++++=
T Consensus 19 ~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EK 98 (329)
T 3evn_A 19 RFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEK 98 (329)
T ss_dssp HHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEcc
Confidence 345566554 45777777665321 11111111 13457788886558898654332 23467889999999885
Q ss_pred ccccc---HHHHHHHHHHcCceeEec
Q psy10186 79 PFYGD---QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 P~~~~---q~~~a~~~~~~g~g~~~~ 101 (124)
|...+ -....+..++.|.-+.+.
T Consensus 99 P~a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 99 PFTLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp SCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 66432 233445556667665554
No 174
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=28.80 E-value=1.5e+02 Score=20.55 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=54.4
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCCC---CCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeeee-
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSIE---NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIGV- 78 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~~- 78 (124)
..+..+... +.+++.++..+... ....++ ..|-+..+++..+.+|+++--.-. -.+..++..|+++++=
T Consensus 19 ~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~--~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EK 96 (359)
T 3e18_A 19 YHVTLASAADNLEVHGVFDILAEKREAAAQKGL--KIYESYEAVLADEKVDAVLIATPNDSHKELAISALEAGKHVVCEK 96 (359)
T ss_dssp HHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTC--CBCSCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCC--ceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeC
Confidence 445667666 56777777654311 011123 234577888865688996544432 3467889999999985
Q ss_pred cccc---cHHHHHHHHHHcCceeEec
Q psy10186 79 PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
|... |-....+..++.|.-+.+.
T Consensus 97 P~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (359)
T 3e18_A 97 PVTMTSEDLLAIMDVAKRVNKHFMVH 122 (359)
T ss_dssp SCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 6543 2333445556667665554
No 175
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=28.79 E-value=81 Score=17.61 Aligned_cols=58 Identities=17% Similarity=0.080 Sum_probs=34.9
Q ss_pred hHHHHHHh----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCCC
Q psy10186 64 SALEAIHY----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 64 t~~ea~~~----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
.+++.+.. .+|+|++....+. .....+.+.|+--.+. +.++.++|..+|++......+
T Consensus 69 ~~~~~l~~~~~~~~~ii~~s~~~~~-~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~~ 130 (136)
T 3hdv_A 69 DLIRTIRASERAALSIIVVSGDTDV-EEAVDVMHLGVVDFLL-KPVDLGKLLELVNKELKIGEG 130 (136)
T ss_dssp HHHHHHHTSTTTTCEEEEEESSCCH-HHHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHC----
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCh-HHHHHHHhCCcceEEe-CCCCHHHHHHHHHHHhcCchh
Confidence 45555543 4677777544443 3444555667655554 457899999999999866543
No 176
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=28.70 E-value=79 Score=17.49 Aligned_cols=51 Identities=14% Similarity=0.107 Sum_probs=29.2
Q ss_pred hCCCeeeecccccHHHH--HHHHHHcCce--eEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSH--VRHIVDLGAG--VELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~--a~~~~~~g~g--~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|++++....+.... .......+.| -.+. +.++.++|.++++++.....
T Consensus 73 ~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~-KP~~~~~l~~~l~~~~~~~~ 127 (135)
T 3eqz_A 73 SPASLILISGYDSGVLHSAETLALSCGLNVINTFT-KPINTEVLTCFLTSLSNRQA 127 (135)
T ss_dssp CCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEE-SSCCHHHHHHHHHHHSCCC-
T ss_pred CCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeC-CCCCHHHHHHHHHHHHhhcc
Confidence 35677776544332111 2222334555 3343 56789999999999986544
No 177
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=28.42 E-value=1.4e+02 Score=20.28 Aligned_cols=92 Identities=10% Similarity=-0.005 Sum_probs=53.6
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeee
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIG 77 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~ 77 (124)
.+++++.+. +.+++.++..+... +.. ++ ...+.+..+++..+.+|+++.-.-. -.+.+++..|+++++
T Consensus 19 ~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~-~~-~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 19 RFVAGLRESAQAEVRGIASRRLENAQKMAKEL-AI-PVAYGSYEELCKDETIDIIYIPTYNQGHYSAAKLALSQGKPVLL 96 (330)
T ss_dssp HHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHT-TC-CCCBSSHHHHHHCTTCSEEEECCCGGGHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHc-CC-CceeCCHHHHhcCCCCCEEEEcCCCHHHHHHHHHHHHCCCeEEE
Confidence 456677765 46777677665311 011 11 0234567777755688986554433 346788999999988
Q ss_pred e-cccc---cHHHHHHHHHHcCceeEec
Q psy10186 78 V-PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 78 ~-P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
- |... +-....+.+++.|.-+.+.
T Consensus 97 EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 97 EKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp CSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4 6543 2233445556667666554
No 178
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=28.34 E-value=81 Score=17.45 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=27.9
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCC-CHHHHHHHHHHHhcCCCC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNI-TLESIAWATSIVLNNPRR 123 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~-~~~~l~~~l~~ll~~~~~ 123 (124)
..|++++....+... .....+.|+--.+. +.+ +.+++.+.+++.+....|
T Consensus 79 ~~~ii~~t~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~~l~~~i~~~l~~~~~ 129 (130)
T 3eod_A 79 QTPVLVISATENMAD-IAKALRLGVEDVLL-KPVKDLNRLREMVFACLYPSMF 129 (130)
T ss_dssp CCCEEEEECCCCHHH-HHHHHHHCCSEEEE-SCC---CHHHHHHHHHHC----
T ss_pred CCCEEEEEcCCCHHH-HHHHHHcCCCEEEe-CCCCcHHHHHHHHHHHhchhhc
Confidence 578887754444433 33444566654444 334 688999999999876554
No 179
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=28.31 E-value=51 Score=23.53 Aligned_cols=30 Identities=20% Similarity=0.367 Sum_probs=23.5
Q ss_pred CCcceEEecCChhhHHHH-----HHhCCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEA-----IHYGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea-----~~~g~P~l~~P~~ 81 (124)
..+|.+|.=||. +++.+ ...|+|++.+|..
T Consensus 105 ~~~d~IIavGGG-s~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 105 HGSDILVGVGGG-KTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HTCSEEEEESSH-HHHHHHHHHHHHTTCEEEECCSS
T ss_pred cCCCEEEEeCCc-HHHHHHHHHHHhcCCCEEEecCc
Confidence 578999998886 45544 4579999999985
No 180
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=28.25 E-value=92 Score=18.10 Aligned_cols=105 Identities=12% Similarity=0.060 Sum_probs=54.8
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCC----CCCCCCcEEEeeccChHHhhc---CCCcceEEecCCh-hh---HHHHHH---h
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVLA---HPNCRLFISHGGV-NS---ALEAIH---Y 71 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l~---~~~~d~~i~~gG~-~t---~~ea~~---~ 71 (124)
-..+++.|.+.|++++++-...+ ..+..-.+ +.+.....+.+. ...+|++|.--+. .. +...+. .
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~-i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~ 97 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRA-VLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNP 97 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEE-EESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCE-EECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCC
Confidence 35677888888888877664422 11111122 333333333332 1578887755442 11 222222 2
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
+++++.. .....+.+.+.+.|+-.++.+ .......+-+.+
T Consensus 98 ~~~iiar---~~~~~~~~~l~~~G~d~vi~p----~~~~a~~i~~~l 137 (140)
T 3fwz_A 98 DIEIIAR---AHYDDEVAYITERGANQVVMG----EREIARTMLELL 137 (140)
T ss_dssp SSEEEEE---ESSHHHHHHHHHTTCSEEEEH----HHHHHHHHHHHH
T ss_pred CCeEEEE---ECCHHHHHHHHHCCCCEEECc----hHHHHHHHHHHh
Confidence 3343332 345567788899999988874 334444444443
No 181
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=28.16 E-value=84 Score=17.58 Aligned_cols=57 Identities=16% Similarity=0.097 Sum_probs=34.0
Q ss_pred hHHHHHH---hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIH---YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~---~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+++.+. ...|+|++.-..+.. ......+.|+--.+. +.++.+++...+++++....
T Consensus 66 ~~~~~l~~~~~~~~ii~ls~~~~~~-~~~~~~~~ga~~~l~-Kp~~~~~L~~~i~~~~~~~~ 125 (133)
T 3b2n_A 66 EVLAEIRKKHLNIKVIIVTTFKRPG-YFEKAVVNDVDAYVL-KERSIEELVETINKVNNGEK 125 (133)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHH-HHHHHHHTTCSEEEE-TTSCHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHCCCCcEEEEecCCCHH-HHHHHHHcCCcEEEE-CCCCHHHHHHHHHHHHcCCC
Confidence 3455554 357777775444433 334444566654444 45789999999999886544
No 182
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori}
Probab=28.16 E-value=26 Score=23.17 Aligned_cols=23 Identities=13% Similarity=0.050 Sum_probs=18.1
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 186 ~vlvVsHg~~i~~l~~~l~~~~~ 208 (263)
T 3c7t_A 186 NVIFIGHAITLDQMVGALHRLRD 208 (263)
T ss_dssp CEEEEECHHHHHHHHHHHHTTCS
T ss_pred eEEEEeCHHHHHHHHHHHhCCCc
Confidence 44789999988877777778774
No 183
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=28.12 E-value=1.4e+02 Score=20.28 Aligned_cols=91 Identities=15% Similarity=0.068 Sum_probs=56.3
Q ss_pred HHHHHhhCC-CeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceE-EecCC---hhhHHHHHHhCCCeeee
Q psy10186 9 LVTAFSRTG-LTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLF-ISHGG---VNSALEAIHYGIPIIGV 78 (124)
Q Consensus 9 ~~~~l~~~~-~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~gG---~~t~~ea~~~g~P~l~~ 78 (124)
.+.++...+ .+++.++..+... +..+ + ..-|-+..+++..+..|+| |+..- .-.+.+|+..||++++=
T Consensus 39 ~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g-~-~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~E 116 (350)
T 4had_A 39 VVPAIQDAENCVVTAIASRDLTRAREMADRFS-V-PHAFGSYEEMLASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCE 116 (350)
T ss_dssp HHHHHHHCSSEEEEEEECSSHHHHHHHHHHHT-C-SEEESSHHHHHHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC-C-CeeeCCHHHHhcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEe
Confidence 456677764 6777777765311 1111 1 0235578888877788996 44332 24578999999999985
Q ss_pred -ccc---ccHHHHHHHHHHcCceeEec
Q psy10186 79 -PFY---GDQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 -P~~---~~q~~~a~~~~~~g~g~~~~ 101 (124)
|.. .|-....+..++.|.-+.+.
T Consensus 117 KPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 117 KPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp SCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred CCcccchhhHHHHHHHHHHcCCceeEe
Confidence 664 34445556666677766654
No 184
>2yf0_A Myotubularin-related protein 6; hydrolase; 2.65A {Homo sapiens}
Probab=28.09 E-value=71 Score=23.98 Aligned_cols=37 Identities=14% Similarity=-0.057 Sum_probs=29.5
Q ss_pred HHHHHHcCceeEec-CCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 88 VRHIVDLGAGVELS-YFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 88 a~~~~~~g~g~~~~-~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
|+.+...|..+++. .+.+++....-+|.+++-||-||
T Consensus 322 a~~v~~~g~sVLVhcsDGwDrT~ql~SLaqllLDPyyR 359 (512)
T 2yf0_A 322 AKAITVENASVLVHCSDGWDRTSQVCSLGSLLLDSYYR 359 (512)
T ss_dssp HHHHHTTCCCEEECTTTSSSHHHHHHHHHHHHHCSGGG
T ss_pred HHHHHhCCCeEEEECCCCccccHHHHHHHHHHhCcccc
Confidence 45555678888887 46788888888999999999887
No 185
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=28.04 E-value=90 Score=17.91 Aligned_cols=50 Identities=14% Similarity=0.084 Sum_probs=30.3
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+ ........+.|+--.+. +.++.++|...++.++....
T Consensus 77 ~~~~ii~ls~~~~-~~~~~~~~~~g~~~~l~-kp~~~~~L~~~l~~~~~~~~ 126 (154)
T 2qsj_A 77 PSNAVALISGETD-HELIRAALEAGADGFIP-KSADPQVLIHAVSLILEGEI 126 (154)
T ss_dssp TTSEEEEC------CHHHHHHHHTTCCBBCC-TTSCHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEeCCCC-HHHHHHHHHccCCEEEe-CCCCHHHHHHHHHHHHcCCE
Confidence 4678888744333 23344445566654554 45789999999999886554
No 186
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1
Probab=27.98 E-value=23 Score=22.53 Aligned_cols=23 Identities=26% Similarity=0.131 Sum_probs=17.8
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 157 ~vlvVsHg~~i~~l~~~l~~~~~ 179 (211)
T 1fzt_A 157 KVLIAAHGNSLRALIMDLEGLTG 179 (211)
T ss_dssp CEEEESCHHHHHHHHHHHHTCCT
T ss_pred eEEEEeChHHHHHHHHHHhCCCH
Confidence 44799999988887777777663
No 187
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae}
Probab=27.94 E-value=26 Score=23.32 Aligned_cols=24 Identities=21% Similarity=0.159 Sum_probs=18.4
Q ss_pred CcceEEecCChhhHHHHHHhCCCe
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
..-++|+|||....+-+...|.|.
T Consensus 199 ~~vlvVsHg~~i~~l~~~l~g~~~ 222 (268)
T 4eo9_A 199 RTVLIVAHGNSLRALVKHLDEMSD 222 (268)
T ss_dssp CCEEEEECHHHHHHHHHHHTTCCH
T ss_pred CEEEEEeCHHHHHHHHHHHhCCCH
Confidence 344689999998888777777663
No 188
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=27.73 E-value=73 Score=20.80 Aligned_cols=37 Identities=8% Similarity=0.272 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEe
Q psy10186 2 SDGMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIR 39 (124)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~ 39 (124)
|....+++++.|.+.|++-||...+..+ ..|+++.+.
T Consensus 157 Ps~~aq~v~d~lv~~GIk~I~nFap~~l-~vp~~v~v~ 193 (212)
T 3keo_A 157 PSTEAQEVADILVKAGIKGILSFSPVHL-TLPKDIIVQ 193 (212)
T ss_dssp CGGGHHHHHHHHHHHTCCEEEECSSSCC-CCCTTSEEE
T ss_pred CchhHHHHHHHHHHcCCCEEEEcCCccc-CCCCCcEEE
Confidence 5556678999999999999999877654 357776643
No 189
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str}
Probab=27.48 E-value=27 Score=22.59 Aligned_cols=24 Identities=33% Similarity=0.425 Sum_probs=18.5
Q ss_pred cceEEecCChhhHHHHHHhCCCee
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPII 76 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~l 76 (124)
.-++|+|||....+-+...|.|.-
T Consensus 157 ~vlvVsHg~~i~~l~~~l~~~~~~ 180 (219)
T 2qni_A 157 PIAFVGHGGVGTLLKCHIEGRGIS 180 (219)
T ss_dssp CEEEEECHHHHHHHHHHHHTCCCC
T ss_pred eEEEEeCHHHHHHHHHHHhCcCHH
Confidence 447899999888777777787753
No 190
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A*
Probab=27.37 E-value=30 Score=22.94 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=19.0
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 170 ~vliVsHg~~ir~l~~~l~g~~~ 192 (265)
T 3f3k_A 170 DIMVFAHGHALRYFAAIWFGLGV 192 (265)
T ss_dssp EEEEEECHHHHHHHHHHHTTCSE
T ss_pred cEEEEeChHHHHHHHHHHhCCCH
Confidence 34689999998888888888775
No 191
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=27.16 E-value=1.5e+02 Score=20.09 Aligned_cols=63 Identities=16% Similarity=0.083 Sum_probs=33.5
Q ss_pred EEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCC-eeeecccccHHHHHHHHHHcCceeEecCC
Q psy10186 37 HIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIP-IIGVPFYGDQLSHVRHIVDLGAGVELSYF 103 (124)
Q Consensus 37 ~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P-~l~~P~~~~q~~~a~~~~~~g~g~~~~~~ 103 (124)
...+.++..+... ... ...||. .+..+++..|+| ++++.-..+.....+.+...|.|..+.++
T Consensus 224 ~~i~~is~~e~~~--l~~--~~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~ 291 (299)
T 2ap9_A 224 SLVSEIDTGTLAQ--LLP--TLELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291 (299)
T ss_dssp CEESEEEHHHHHH--HGG--GSCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECC
T ss_pred cChhhcCHHHHHH--HHH--hhcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecC
Confidence 3445454444332 122 335565 345667889999 55653322222224455566888877643
No 192
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A
Probab=27.07 E-value=28 Score=22.10 Aligned_cols=23 Identities=30% Similarity=0.419 Sum_probs=17.5
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 144 ~vlvVsHg~~i~~l~~~l~~~~~ 166 (207)
T 1h2e_A 144 TVLIVTHGVVLKTLMAAFKDTPL 166 (207)
T ss_dssp EEEEEECHHHHHHHHHHHTTCCG
T ss_pred eEEEEcCHHHHHHHHHHHhCCCH
Confidence 44689999988777777777763
No 193
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=27.04 E-value=1.2e+02 Score=19.55 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHH--HHHHhCCCeeeecc
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSAL--EAIHYGIPIIGVPF 80 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~--ea~~~g~P~l~~P~ 80 (124)
.+..+.+++.+.|+.+++.....+.. ......+.+...++|++|..+...... .+...|+|++.+-.
T Consensus 26 ~~~gi~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~~~dgiIi~~~~~~~~~~~l~~~~iPvV~~~~ 94 (277)
T 3e61_A 26 IARGVEDVALAHGYQVLIGNSDNDIK---------KAQGYLATFVSHNCTGMISTAFNENIIENTLTDHHIPFVFIDR 94 (277)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTCHH---------HHHHHHHHHHHTTCSEEEECGGGHHHHHHHHHHC-CCEEEGGG
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHH---------HHHHHHHHHHhCCCCEEEEecCChHHHHHHHHcCCCCEEEEec
Confidence 34455556667788877654332110 000111112226788887776433333 35557999998743
No 194
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=26.90 E-value=1.3e+02 Score=19.50 Aligned_cols=66 Identities=11% Similarity=0.012 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh---hhHHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV---NSALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~---~t~~ea~~~g~P~l~~P 79 (124)
.+..+.+++.+.|+.+++......... . ......+...++|++|..+.. ..+..+...|+|++.+-
T Consensus 28 ~~~gi~~~a~~~g~~~~~~~~~~~~~~-~--------~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 28 MVFGITEVLSTTQYHLVVTPHIHAKDS-M--------VPIRYILETGSADGVIISKIEPNDPRVRFMTERNMPFVTHG 96 (288)
T ss_dssp HHHHHHHHHTTSSCEEEECCBSSGGGT-T--------HHHHHHHHHTCCSEEEEESCCTTCHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCCEEEEecCCcchhH-H--------HHHHHHHHcCCccEEEEecCCCCcHHHHHHhhCCCCEEEEC
Confidence 344455556677888776543322111 0 011112222678887665432 22334456799999873
No 195
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=26.55 E-value=1.5e+02 Score=20.05 Aligned_cols=92 Identities=8% Similarity=-0.004 Sum_probs=54.5
Q ss_pred HHHHHHhhCCCeEEEEEcCCCCC----CCCCcEEEeeccChHHhh--------cCCCcceEEecCC----hhhHHHHHHh
Q psy10186 8 LLVTAFSRTGLTVLWRYEGDSIE----NLPGNVHIRKWIPQQDVL--------AHPNCRLFISHGG----VNSALEAIHY 71 (124)
Q Consensus 8 ~~~~~l~~~~~~~i~~~g~~~~~----~~~~~v~~~~~~~~~~~l--------~~~~~d~~i~~gG----~~t~~ea~~~ 71 (124)
..++++.+.+.+++.++..+... +..+...+ |.+..+++ ..+..|+++-..- .-.+.+|+..
T Consensus 18 ~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~a 95 (312)
T 3o9z_A 18 RHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEF--FTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRL 95 (312)
T ss_dssp HHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEE--ESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHT
T ss_pred HHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCce--eCCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHC
Confidence 45667777788888888765421 12233333 33555655 4478999644332 2447789999
Q ss_pred CCCeeee-cccc---cHHHHHHHHHHcCceeEec
Q psy10186 72 GIPIIGV-PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 72 g~P~l~~-P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
|+++++= |... |-....+..++.|.-+.+.
T Consensus 96 GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 129 (312)
T 3o9z_A 96 GANALSEKPLVLWPEEIARLKELEARTGRRVYTV 129 (312)
T ss_dssp TCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 9999984 6653 2233444455567655443
No 196
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=26.53 E-value=32 Score=21.19 Aligned_cols=22 Identities=14% Similarity=0.122 Sum_probs=16.8
Q ss_pred cceEEecCChhhHHHHHHhCCC
Q psy10186 53 CRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P 74 (124)
.-++|+|+|....+-+...|.|
T Consensus 109 ~vlvVsH~~~i~~l~~~l~~~~ 130 (173)
T 2rfl_A 109 SVMLVGHNPTMEATLEAMIGED 130 (173)
T ss_dssp EEEEEECTTHHHHHHHHHHCHH
T ss_pred eEEEEeCCHHHHHHHHHHhCCC
Confidence 3468999998777777777766
No 197
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=26.49 E-value=97 Score=17.78 Aligned_cols=50 Identities=12% Similarity=0.063 Sum_probs=31.0
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+. .....+.+.|+--.+. +.++.++|...+++++....
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~l~-kp~~~~~L~~~i~~~~~~~~ 127 (153)
T 3cz5_A 78 GAARILIFTMHQGS-AFALKAFEAGASGYVT-KSSDPAELVQAIEAILAGRR 127 (153)
T ss_dssp TTCCEEEEESCCSH-HHHHHHHHTTCSEEEE-TTSCTTHHHHHHHHHTTTCC
T ss_pred CCCeEEEEECCCCH-HHHHHHHHCCCcEEEe-cCCCHHHHHHHHHHHHhCCc
Confidence 36788887544443 3344445566654454 34677889998888876543
No 198
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=26.35 E-value=1e+02 Score=19.71 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=20.7
Q ss_pred CCcceEEecCChhhHH--------------HHHHhCCCeeeec
Q psy10186 51 PNCRLFISHGGVNSAL--------------EAIHYGIPIIGVP 79 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~--------------ea~~~g~P~l~~P 79 (124)
..+|++|-.||..+.. +++..|+|++.+=
T Consensus 59 ~~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC 101 (219)
T 1q7r_A 59 EGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTC 101 (219)
T ss_dssp TTCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEET
T ss_pred hhCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEEC
Confidence 5689998888865443 3345789998873
No 199
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=26.30 E-value=89 Score=17.27 Aligned_cols=57 Identities=16% Similarity=0.086 Sum_probs=31.8
Q ss_pred hHHHHHHh----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIHY----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~~----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+++.+.. ..|.+++-...+.. ......+.|+--.+. +.++.++|.+.|++......
T Consensus 67 ~~~~~l~~~~~~~~~~ii~~~~~~~~-~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~ 127 (132)
T 3lte_A 67 DVIRSLRQNKVANQPKILVVSGLDKA-KLQQAVTEGADDYLE-KPFDNDALLDRIHDLVNEGH 127 (132)
T ss_dssp HHHHHHHTTTCSSCCEEEEECCSCSH-HHHHHHHHTCCEEEC-SSCCHHHHHHHHHHHHC---
T ss_pred HHHHHHHhcCccCCCeEEEEeCCChH-HHHHHHHhChHHHhh-CCCCHHHHHHHHHHHcCCCC
Confidence 45555553 23444432222333 444555667655554 45789999999999876543
No 200
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=26.21 E-value=1.3e+02 Score=20.91 Aligned_cols=86 Identities=9% Similarity=-0.024 Sum_probs=45.1
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh-----hhH-HHHHHhCCC-eeee-
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV-----NSA-LEAIHYGIP-IIGV- 78 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~-----~t~-~ea~~~g~P-~l~~- 78 (124)
..+++.+..+|.+++..-........-. ....+.+..+++ +.+|+++.|.-. +.+ .+.+..=+| .+++
T Consensus 150 ~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~~~~~~l~ell--~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN 225 (324)
T 3evt_A 150 QSLAAKASALGMHVIGVNTTGHPADHFH--ETVAFTATADAL--ATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLIN 225 (324)
T ss_dssp HHHHHHHHHTTCEEEEEESSCCCCTTCS--EEEEGGGCHHHH--HHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEE
T ss_pred HHHHHHHHhCCCEEEEECCCcchhHhHh--hccccCCHHHHH--hhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEE
Confidence 4677888888998865433221111111 123445567777 789999888632 111 122222222 2333
Q ss_pred -ccc--ccHHHHHHHHHHcCc
Q psy10186 79 -PFY--GDQLSHVRHIVDLGA 96 (124)
Q Consensus 79 -P~~--~~q~~~a~~~~~~g~ 96 (124)
-+. .|+....+.+++..+
T Consensus 226 ~aRG~~vd~~aL~~aL~~g~i 246 (324)
T 3evt_A 226 IGRGPAVDTTALMTALDHHQL 246 (324)
T ss_dssp CSCGGGBCHHHHHHHHHTTSC
T ss_pred cCCChhhhHHHHHHHHHhCCc
Confidence 222 366777777766544
No 201
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A
Probab=26.06 E-value=31 Score=22.87 Aligned_cols=22 Identities=23% Similarity=0.354 Sum_probs=16.8
Q ss_pred ceEEecCChhhHHHHHHhCCCe
Q psy10186 54 RLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 54 d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
-++|+|||....+-+...|.|.
T Consensus 197 vlvVsHg~~i~~l~~~l~~~~~ 218 (273)
T 3d4i_A 197 TLIVSHSSALDSCTRPLLGLPP 218 (273)
T ss_dssp EEEEECTTHHHHTTHHHHTCCC
T ss_pred EEEEechHHHHHHHHHHcCCCc
Confidence 4689999987777666777664
No 202
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=25.95 E-value=57 Score=22.96 Aligned_cols=29 Identities=21% Similarity=0.407 Sum_probs=22.4
Q ss_pred CcceEEecCChhhHHHH-----HHhCCCeeeeccc
Q psy10186 52 NCRLFISHGGVNSALEA-----IHYGIPIIGVPFY 81 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea-----~~~g~P~l~~P~~ 81 (124)
++|++|.=||. +++.+ ...|+|++.+|..
T Consensus 94 ~~d~IIavGGG-sv~D~aK~iA~~~~~p~i~IPTT 127 (376)
T 1kq3_A 94 ETDVVVGIGGG-KTLDTAKAVAYKLKKPVVIVPTI 127 (376)
T ss_dssp TCCEEEEEESH-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEeCCc-HHHHHHHHHHHhcCCCEEEecCc
Confidence 78999988875 45543 4569999999985
No 203
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=25.88 E-value=71 Score=23.19 Aligned_cols=34 Identities=29% Similarity=0.514 Sum_probs=26.4
Q ss_pred HHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 45 QDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 45 ~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
..++.|+..|.+...||....-.+...++|++..
T Consensus 179 ~~L~~~p~v~~V~fTGs~~~~~~a~~~~kp~~~e 212 (452)
T 3my7_A 179 NALMKHDDIALILATGGPGMVKAAYSSGKPAIGV 212 (452)
T ss_dssp HHHHHCTTCCEEEECSCHHHHHHHHTSSSCEEEC
T ss_pred HHHHhCCCccEEEEECcHHHHHHHHhcCCCEEec
Confidence 4477788999999999987666666678888653
No 204
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis}
Probab=25.84 E-value=30 Score=22.00 Aligned_cols=23 Identities=30% Similarity=0.481 Sum_probs=18.0
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 146 ~vlvVsHg~~i~~l~~~l~~~~~ 168 (208)
T 2a6p_A 146 DVLFVSHGHFSRAVITRWVQLPL 168 (208)
T ss_dssp CEEEEECHHHHHHHHHHHTTCCG
T ss_pred cEEEEeCHHHHHHHHHHHhCCCH
Confidence 44689999998888777777764
No 205
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=25.82 E-value=1.4e+02 Score=19.26 Aligned_cols=67 Identities=12% Similarity=0.125 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh-hHHH-HHHhCCCeeeecc
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN-SALE-AIHYGIPIIGVPF 80 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~-t~~e-a~~~g~P~l~~P~ 80 (124)
.+..+.+++.+.|+.+++.....+.. ......+.+...++|++|..+... ...+ +...|+|++.+-.
T Consensus 25 ~~~gi~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 25 LFKGISSILESRGYIGVLFDANADIE---------REKTLLRAIGSRGFDGLILQSFSNPQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHHHHHHTTTCEEEEEECTTCHH---------HHHHHHHHHHTTTCSEEEEESSCCHHHHHHHHTTSSCEEEESC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHH---------HHHHHHHHHHhCCCCEEEEecCCcHHHHHHHHHCCCCEEEEec
Confidence 44555556677788887765432211 001111222236788877665432 2333 3347999988743
No 206
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.75 E-value=1e+02 Score=17.72 Aligned_cols=47 Identities=17% Similarity=0.017 Sum_probs=27.9
Q ss_pred hCCCeeeecccccHHHHHHHHHHcC-ceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLG-AGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g-~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
..+|+|++-...+. .......+.| +--.+. +.++.++|...++.++.
T Consensus 78 ~~~~ii~ls~~~~~-~~~~~~~~~g~~~~~l~-kP~~~~~L~~~i~~~~~ 125 (154)
T 2rjn_A 78 PDIERVVISGYADA-QATIDAVNRGKISRFLL-KPWEDEDVFKVVEKGLQ 125 (154)
T ss_dssp TTSEEEEEECGGGH-HHHHHHHHTTCCSEEEE-SSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCCH-HHHHHHHhccchheeee-CCCCHHHHHHHHHHHHH
Confidence 36788887444443 3334444454 533333 35688889888887763
No 207
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum}
Probab=25.52 E-value=30 Score=22.98 Aligned_cols=23 Identities=26% Similarity=0.241 Sum_probs=17.8
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 195 ~vlvVsHg~~ir~l~~~l~~~~~ 217 (267)
T 3d8h_A 195 SVLVSAHGNSLRALLYLLEGMTP 217 (267)
T ss_dssp CEEEEECHHHHHHHHHHHHTCCH
T ss_pred eEEEEeCHHHHHHHHHHHhCCCH
Confidence 44799999988877777777763
No 208
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=25.49 E-value=1.7e+02 Score=20.37 Aligned_cols=61 Identities=15% Similarity=-0.000 Sum_probs=32.3
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhhHHHH-HHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNSALEA-IHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t~~ea-~~~g~P~l~~ 78 (124)
.+..+.+++.+.|+.+++....+. . .. .+.+....+|++|.........+. ...|+|+|.+
T Consensus 42 l~~gi~~~a~~~g~~~~i~~~~~~-~---~~---------i~~l~~~~vDGiIi~~~~~~~~~~l~~~~iPvV~i 103 (412)
T 4fe7_A 42 VVEGVGEYLQASQSEWDIFIEEDF-R---AR---------IDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGV 103 (412)
T ss_dssp HHHHHHHHHHHHTCCEEEEECC-C-C--------------------CCCSEEEEETTCHHHHHHHTTCCSCEEEE
T ss_pred HHHHHHHHHHhcCCCeEEEecCCc-c---ch---------hhhHhcCCCCEEEEecCChHHHHHHhhCCCCEEEe
Confidence 445555566677888777653221 1 00 111222678888774433334444 3569999987
No 209
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=25.43 E-value=94 Score=17.27 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=29.1
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+... .....+.|+--.+. +.++.+++...++.++....
T Consensus 74 ~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~~~ 123 (136)
T 1mvo_A 74 LMFPILMLTAKDEEFD-KVLGLELGADDYMT-KPFSPREVNARVKAILRRSE 123 (136)
T ss_dssp CCCCEEEEECTTCCCC-HHHHHHTTCCEEEE-SSCCHHHHHHHHHHHHHTC-
T ss_pred CCCCEEEEECCCCHHH-HHHHHhCCCCEEEE-CCCCHHHHHHHHHHHHHhhc
Confidence 3567777644333322 22334556544443 45689999999998875543
No 210
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=25.38 E-value=73 Score=17.49 Aligned_cols=19 Identities=16% Similarity=0.188 Sum_probs=15.7
Q ss_pred HHHHHHhhCCCeEEEEEcC
Q psy10186 8 LLVTAFSRTGLTVLWRYEG 26 (124)
Q Consensus 8 ~~~~~l~~~~~~~i~~~g~ 26 (124)
-+++.|+..|++++-.+|-
T Consensus 54 ~VLnKLE~~G~rVvsmtGv 72 (83)
T 1jg5_A 54 IVLDKLECRGFRVLSMTGV 72 (83)
T ss_dssp HHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHhccCeEEEEEecC
Confidence 4678899999999988764
No 211
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=25.20 E-value=44 Score=21.48 Aligned_cols=21 Identities=19% Similarity=0.305 Sum_probs=17.4
Q ss_pred cCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 94 LGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 94 ~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
-|+|+.+ +.+++.+++.+.++
T Consensus 111 cGVGV~V-----T~EqI~~~V~~~i~ 131 (187)
T 3tl4_X 111 SGVGIEI-----TEDQVRNYVMQYIQ 131 (187)
T ss_dssp TTTTCCC-----CHHHHHHHHHHHHH
T ss_pred CCCCeEe-----CHHHHHHHHHHHHH
Confidence 3888888 78999999988874
No 212
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A
Probab=25.18 E-value=31 Score=22.90 Aligned_cols=23 Identities=30% Similarity=0.258 Sum_probs=17.8
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 182 ~vlvVsHg~~ir~l~~~l~~~~~ 204 (267)
T 2hhj_A 182 TILISAHGNSSRALLKHLEGISD 204 (267)
T ss_dssp CEEEEECHHHHHHHHHHHHTCCT
T ss_pred EEEEEcCcHHHHHHHHHHhCCCH
Confidence 34789999988877777777764
No 213
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A
Probab=25.10 E-value=21 Score=23.62 Aligned_cols=23 Identities=17% Similarity=0.163 Sum_probs=16.3
Q ss_pred cceEEecCChhhHHHHHHhCCCe
Q psy10186 53 CRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 53 ~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
.-++|+|||....+-+...|.|.
T Consensus 187 ~vlvVsHg~~i~~l~~~l~g~~~ 209 (264)
T 3mbk_A 187 NILIVAHASSLEACTCQLQGLSP 209 (264)
T ss_dssp EEEEEECTTHHHHTTTGGGTCCC
T ss_pred eEEEEecHHHHHHHHHHHcCCCH
Confidence 44689999987766666666553
No 214
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.05 E-value=99 Score=17.38 Aligned_cols=53 Identities=8% Similarity=0.159 Sum_probs=33.0
Q ss_pred hHHHHHH-----hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 64 SALEAIH-----YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 64 t~~ea~~-----~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
.+++.+. ...|+|++....+. .......+.|+--.+. +.++.+++.+.+++++
T Consensus 79 ~~~~~l~~~~~~~~~~ii~~t~~~~~-~~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~ 136 (149)
T 1k66_A 79 EVLQEIKQDEVLKKIPVVIMTTSSNP-KDIEICYSYSISSYIV-KPLEIDRLTETVQTFI 136 (149)
T ss_dssp HHHHHHTTSTTGGGSCEEEEESCCCH-HHHHHHHHTTCSEEEE-CCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCcccCCCeEEEEeCCCCH-HHHHHHHHCCCCEEEe-CCCCHHHHHHHHHHHH
Confidence 3455554 46788887554443 3444455667655554 3568888988888776
No 215
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=24.99 E-value=1.7e+02 Score=20.14 Aligned_cols=90 Identities=12% Similarity=0.070 Sum_probs=53.7
Q ss_pred HHHHhhC-CCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-ccc
Q psy10186 10 VTAFSRT-GLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV-PFY 81 (124)
Q Consensus 10 ~~~l~~~-~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~-P~~ 81 (124)
+..+... +.+++.++..+.. .+..+.... |-+..+++..+.+|+++.-.- .-.+..|+..|+++++= |..
T Consensus 22 ~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a 99 (362)
T 3fhl_A 22 APFISTNPHFELYKIVERSKELSKERYPQASI--VRSFKELTEDPEIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFT 99 (362)
T ss_dssp HHHHHHCTTEEEEEEECSSCCGGGTTCTTSEE--ESCSHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHhhCCCeEEEEEEcCCHHHHHHhCCCCce--ECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCC
Confidence 4556555 5677777766531 122223333 346778886567898654333 24477899999999985 664
Q ss_pred c---cHHHHHHHHHHcCceeEec
Q psy10186 82 G---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 82 ~---~q~~~a~~~~~~g~g~~~~ 101 (124)
. |-....+..++.|.-+.+.
T Consensus 100 ~~~~ea~~l~~~a~~~g~~~~v~ 122 (362)
T 3fhl_A 100 STTKQGEELIALAKKKGLMLSVY 122 (362)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEE
Confidence 3 2333445555667665554
No 216
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi}
Probab=24.97 E-value=32 Score=22.94 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=18.2
Q ss_pred CcceEEecCChhhHHHHHHhCCCe
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIPI 75 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P~ 75 (124)
..-++|+|||....+-+...|.|.
T Consensus 201 ~~vlvVsHg~~i~~ll~~l~g~~~ 224 (274)
T 4emb_A 201 KKVIVAAHGNSLRALVKYFDNLSE 224 (274)
T ss_dssp CCEEEEECHHHHHHHHHHHHTCCH
T ss_pred CEEEEEeCHHHHHHHHHHHhCCCH
Confidence 344799999988887777777663
No 217
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=24.96 E-value=1.7e+02 Score=19.97 Aligned_cols=92 Identities=7% Similarity=0.025 Sum_probs=54.2
Q ss_pred HHHHHHhhC-CCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeee
Q psy10186 8 LLVTAFSRT-GLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIG 77 (124)
Q Consensus 8 ~~~~~l~~~-~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~ 77 (124)
.++..+.+. +.+++.++..+... +..+ + ...+.+..+++..+.+|+++.-.-. ..+.+++..|+++++
T Consensus 16 ~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~-~-~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~ 93 (344)
T 3ezy_A 16 IHAENLKMIDDAILYAISDVREDRLREMKEKLG-V-EKAYKDPHELIEDPNVDAVLVCSSTNTHSELVIACAKAKKHVFC 93 (344)
T ss_dssp HHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHT-C-SEEESSHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhC-C-CceeCCHHHHhcCCCCCEEEEcCCCcchHHHHHHHHhcCCeEEE
Confidence 456677665 46777777665311 0111 1 0124567777765589997654433 346688999999988
Q ss_pred e-cccc---cHHHHHHHHHHcCceeEec
Q psy10186 78 V-PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 78 ~-P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
- |... +-....+..++.|.-+.+.
T Consensus 94 EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 121 (344)
T 3ezy_A 94 EKPLSLNLADVDRMIEETKKADVILFTG 121 (344)
T ss_dssp ESCSCSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHhCCcEEEe
Confidence 5 6543 2333455556667666554
No 218
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A*
Probab=24.87 E-value=32 Score=22.77 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=17.3
Q ss_pred CcceEEecCChhhHHHHHHhCCC
Q psy10186 52 NCRLFISHGGVNSALEAIHYGIP 74 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea~~~g~P 74 (124)
..-++|+|||....+-+...|.|
T Consensus 179 ~~vlvVsHg~~ir~l~~~l~~~~ 201 (262)
T 1yfk_A 179 KRVLIAAHGNSLRGIVKHLEGLS 201 (262)
T ss_dssp CCEEEEECHHHHHHHHHHHHTCC
T ss_pred CeEEEEcChHHHHHHHHHHhCCC
Confidence 34479999998877777777765
No 219
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=24.57 E-value=1.1e+02 Score=19.29 Aligned_cols=37 Identities=16% Similarity=0.156 Sum_probs=30.8
Q ss_pred ccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhc
Q psy10186 82 GDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLN 119 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~ 119 (124)
.|-...+..++++|.-+.+. .+++.+++.++|+++..
T Consensus 65 ~Da~~L~~~f~~LgF~V~~~-~dlt~~em~~~l~~f~~ 101 (178)
T 2h54_A 65 VDITGMTMLLQNLGYSVDVK-KNLTASDMTTELEAFAH 101 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-ESCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEEe-cCCCHHHHHHHHHHHHh
Confidence 47777888889999988776 56799999999999864
No 220
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=24.36 E-value=70 Score=22.74 Aligned_cols=29 Identities=21% Similarity=0.327 Sum_probs=21.3
Q ss_pred CcceEEecCChhhHHHH-----HHh------------------CCCeeeeccc
Q psy10186 52 NCRLFISHGGVNSALEA-----IHY------------------GIPIIGVPFY 81 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea-----~~~------------------g~P~l~~P~~ 81 (124)
++|++|.=||. +++.+ +.. ++|++.+|..
T Consensus 109 ~~D~IIavGGG-S~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTT 160 (375)
T 3rf7_A 109 LPVSVVGLGGG-STMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPTV 160 (375)
T ss_dssp CCSEEEEEESH-HHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEESS
T ss_pred CCCEEEEeCCc-HHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcCC
Confidence 39999999886 45543 222 7999999985
No 221
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.28 E-value=1.3e+02 Score=18.29 Aligned_cols=110 Identities=12% Similarity=0.009 Sum_probs=51.7
Q ss_pred HHHHHHHhhC-CCeEEEEEcCCC----CCCCCCcEEEeeccChHHhh---cCCCcceEEecCC-hhh---HHHHHHhCCC
Q psy10186 7 TLLVTAFSRT-GLTVLWRYEGDS----IENLPGNVHIRKWIPQQDVL---AHPNCRLFISHGG-VNS---ALEAIHYGIP 74 (124)
Q Consensus 7 ~~~~~~l~~~-~~~~i~~~g~~~----~~~~~~~v~~~~~~~~~~~l---~~~~~d~~i~~gG-~~t---~~ea~~~g~P 74 (124)
..+++.|.+. |++++++-...+ ..+....+...+..+...+. ....+|.+|.-.+ ... +.+.+...-|
T Consensus 52 ~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 52 TGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp HHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 3456667666 777665543221 01111222222333322221 1156888776444 222 2233333222
Q ss_pred --eeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 75 --IIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 75 --~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
.++. . ..-..+.+.+.+.|+-.++.+.......+.+.+.+-+
T Consensus 132 ~~~ii~-~-~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~ 175 (183)
T 3c85_A 132 KGQIAA-I-AEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQL 175 (183)
T ss_dssp CSEEEE-E-ESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHH
T ss_pred CCEEEE-E-ECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhc
Confidence 2222 2 2234456778888998888754444555555544444
No 222
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=24.09 E-value=1.5e+02 Score=19.14 Aligned_cols=64 Identities=14% Similarity=0.085 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChH-HhhcCCCcceEEecCChh-----hHHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQ-DVLAHPNCRLFISHGGVN-----SALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~gG~~-----t~~ea~~~g~P~l~~ 78 (124)
.+..+.+++.+.|+.+++.....+.. ...... .+.. .++|++|..+... .+-++...|+|++.+
T Consensus 20 ~~~gi~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~-~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 20 LAETAKQRAEQLGYEATIFDSQNDTA---------KESAHFDAIIA-AGYDAIIFNPTDADGSIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHH---------HHHHHHHHHHH-TTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCHH---------HHHHHHHHHHH-cCCCEEEEecCChHHHHHHHHHHHHCCCeEEEE
Confidence 44455556677888887654322111 001111 1222 5788877665322 123344579999886
No 223
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=24.04 E-value=1.8e+02 Score=19.91 Aligned_cols=52 Identities=19% Similarity=0.318 Sum_probs=34.9
Q ss_pred CCCeeeecccccH-------HHHHHHHHHcCceeEec-CCCCCHHHHHHHHHHHhcCCCC
Q psy10186 72 GIPIIGVPFYGDQ-------LSHVRHIVDLGAGVELS-YFNITLESIAWATSIVLNNPRR 123 (124)
Q Consensus 72 g~P~l~~P~~~~q-------~~~a~~~~~~g~g~~~~-~~~~~~~~l~~~l~~ll~~~~~ 123 (124)
-.|.+.+=+.+|- ....+.+++.|+..... +.+.+.+++.+.|+++-+|++.
T Consensus 26 ~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~lp~~~s~~ell~~I~~lN~D~~v 85 (276)
T 3ngx_A 26 LEPSLKLIQIGDNEAASIYARAKIRRGKKIGIAVDLEKYDDISMKDLLKRIDDLAKDPQI 85 (276)
T ss_dssp CCCEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCCHHHHHHHHHHHHHCTTC
T ss_pred CCCcEEEEEeCCCHHHHHHHHHHHHHHHHCCeEEEEECCCCCCHHHHHHHHHHHcCCCCC
Confidence 4577776555432 22455667778832222 5678899999999999988764
No 224
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=23.93 E-value=1.4e+02 Score=18.88 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=32.5
Q ss_pred CCcce-EEecCChhhHH----------------HHHHhCCCeeeecccc----cHHHHHHHHHHcCceeE
Q psy10186 51 PNCRL-FISHGGVNSAL----------------EAIHYGIPIIGVPFYG----DQLSHVRHIVDLGAGVE 99 (124)
Q Consensus 51 ~~~d~-~i~~gG~~t~~----------------ea~~~g~P~l~~P~~~----~q~~~a~~~~~~g~g~~ 99 (124)
..+|+ +|..+.++|+. .++..++|++++|... -...|...+.+.|+-++
T Consensus 80 ~~aD~mvIaPaTanTlAkiA~GiaDnLlt~~a~~~lk~~~plvl~Pa~m~~~~~~~~N~~~L~~~G~~iv 149 (189)
T 2ejb_A 80 VHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVV 149 (189)
T ss_dssp TTEEEEEEEEECHHHHHHHHHTCCSSHHHHHHHHHHHHTCCEEEEECCSSCCHHHHHHHHHHHHTTCEEE
T ss_pred cccCEEEEecCCHHHHHHHHcCcCCcHHHHHHHHHccCCCcEEEEECCCCCCHHHHHHHHHHHHCCeEEe
Confidence 46786 67777665543 2233489999999842 24567777888876554
No 225
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=23.83 E-value=1.9e+02 Score=20.33 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=56.9
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCC-CCCC--cEEEeeccChHHhhcC-CCcceEEe---cCChhhHHHHHHhCCCeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIE-NLPG--NVHIRKWIPQQDVLAH-PNCRLFIS---HGGVNSALEAIHYGIPIIG 77 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~-~~~~--~v~~~~~~~~~~~l~~-~~~d~~i~---~gG~~t~~ea~~~g~P~l~ 77 (124)
.-..+++++.+.|+++++....+.+. .... .....++.+...+... ..+|+++. |-+.. +++.+..|+| +
T Consensus 35 lg~~l~~aa~~lG~~v~~~d~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e~e~~~~~-~l~~l~~g~~--v 111 (403)
T 3k5i_A 35 LGRMLVESANRLNIQVNVLDADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAEIEHVDTY-ALEEVASEVK--I 111 (403)
T ss_dssp HHHHHHHHHHHHTCEEEEEESTTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEESSSCSCHH-HHHHHTTTSE--E
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEECCCCCCHH-HHHHHHcCCc--c
Confidence 44678888999999988877222211 1112 3445566665544322 67888664 44444 3444444777 3
Q ss_pred eccc------ccHHHHHHHHHHcCceeEecC--CCCCHHHHHHHHHHH
Q psy10186 78 VPFY------GDQLSHVRHIVDLGAGVELSY--FNITLESIAWATSIV 117 (124)
Q Consensus 78 ~P~~------~~q~~~a~~~~~~g~g~~~~~--~~~~~~~l~~~l~~l 117 (124)
.|.. .|-..-.+.+++.|+-..-.. +.-+.+++.++++++
T Consensus 112 ~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~~~~~~ 159 (403)
T 3k5i_A 112 EPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAKVGEQL 159 (403)
T ss_dssp SSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHHHHHHH
T ss_pred CcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHHHHHHh
Confidence 3331 344444455565565432111 111456666655543
No 226
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=23.76 E-value=34 Score=21.16 Aligned_cols=13 Identities=23% Similarity=0.514 Sum_probs=10.9
Q ss_pred CCcceEEecCChh
Q psy10186 51 PNCRLFISHGGVN 63 (124)
Q Consensus 51 ~~~d~~i~~gG~~ 63 (124)
..+|++|+.||.+
T Consensus 70 ~~~DlVittGG~g 82 (167)
T 1uuy_A 70 DEMDLILTLGGTG 82 (167)
T ss_dssp SCCSEEEEESCCS
T ss_pred CCCCEEEECCCCC
Confidence 3699999999973
No 227
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=23.60 E-value=1.5e+02 Score=19.08 Aligned_cols=66 Identities=12% Similarity=0.006 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChhh---HHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVNS---ALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~t---~~ea~~~g~P~l~~P 79 (124)
.+..+.+++.+.|+.+++.....+..... ...+.+....+|++|..+...+ +.+....|+|++.+-
T Consensus 30 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~---------~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~iPvV~~~ 98 (289)
T 3g85_A 30 FLRGLQSKLAKQNYNYNVVICPYKTDCLH---------LEKGISKENSFDAAIIANISNYDLEYLNKASLTLPIILFN 98 (289)
T ss_dssp HHHHHHHHHHHTTTCSEEEEEEECTTCGG---------GCGGGSTTTCCSEEEESSCCHHHHHHHHHCCCSSCEEEES
T ss_pred HHHHHHHHHHHcCCeEEEEecCCCchhHH---------HHHHHHhccCCCEEEEecCCcccHHHHHhccCCCCEEEEC
Confidence 44555556667788776554322111100 1112222267888777665322 333344688988873
No 228
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.59 E-value=1.4e+02 Score=20.82 Aligned_cols=60 Identities=10% Similarity=-0.080 Sum_probs=39.0
Q ss_pred cCChhhHHHHHHhCCCeeeeccc-ccHHHHHHHHHH-----cCceeEe-cCCCCCHHHHHHHHHHHh
Q psy10186 59 HGGVNSALEAIHYGIPIIGVPFY-GDQLSHVRHIVD-----LGAGVEL-SYFNITLESIAWATSIVL 118 (124)
Q Consensus 59 ~gG~~t~~ea~~~g~P~l~~P~~-~~q~~~a~~~~~-----~g~g~~~-~~~~~~~~~l~~~l~~ll 118 (124)
|+||.+...+++.|--.+++|-. .+.......+++ .+.++++ ...-....++.+.+++-+
T Consensus 172 ~aG~lA~~a~la~ga~~iliPE~~~~~~~~~~~i~~~~~~g~~~~iivvaEG~~~~~~~~~~~~~~~ 238 (319)
T 4a3s_A 172 HAGDIALWAGLAGGAESILIPEADYDMHEIIARLKRGHERGKKHSIIIVAEGVGSGVEFGKRIEEET 238 (319)
T ss_dssp TCCHHHHHHHHHHTCSEEEBTTBCCCHHHHHHHHHHHHTTTCCCEEEEEETTTCCHHHHHHHHHHHH
T ss_pred chhHHHHHHHhccCCCEEEecCCCCCHHHHHHHHHHHHHcCCCceEEEEECCCCcchHHHHHHHHhC
Confidence 67999999999999999999874 455544544532 2444444 333335666666666554
No 229
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=23.44 E-value=78 Score=23.58 Aligned_cols=74 Identities=15% Similarity=0.172 Sum_probs=46.9
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC-------CCCCCcEEEeeccC-hHHhhc-------CCCcceEEecCCh------h
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI-------ENLPGNVHIRKWIP-QQDVLA-------HPNCRLFISHGGV------N 63 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~-------~~~~~~v~~~~~~~-~~~~l~-------~~~~d~~i~~gG~------~ 63 (124)
..+.+++.|.+.|++.++.+.++.. .+ .+.++++.-.. +...++ ..+..+++++.|. +
T Consensus 23 ~a~~lv~~L~~~GV~~vfg~PG~~~~~l~~al~~-~~~~~~i~~~~E~~Aa~~A~GyAr~tgkp~v~~~TsGpG~~N~~~ 101 (565)
T 2nxw_A 23 LAEALLRALKDRGAQAMFGIPGDFALPFFKVAEE-TQILPLHTLSHEPAVGFAADAAARYSSTLGVAAVTYGAGAFNMVN 101 (565)
T ss_dssp HHHHHHHHHHHTTCCCEEECCCGGGHHHHHHHHH-HCSSCEEECSSHHHHHHHHHHHHHHHTSCEEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCcchHHHHHHHHh-CCCcEEEecCcHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHH
Confidence 4567889999999988888766531 11 11222222222 111110 1456788999885 4
Q ss_pred hHHHHHHhCCCeeeec
Q psy10186 64 SALEAIHYGIPIIGVP 79 (124)
Q Consensus 64 t~~ea~~~g~P~l~~P 79 (124)
.+.||...++|+|++.
T Consensus 102 gv~~A~~~~vPll~it 117 (565)
T 2nxw_A 102 AVAGAYAEKSPVVVIS 117 (565)
T ss_dssp HHHHHHHTTCCEEEEE
T ss_pred HHHHHHhhCCCEEEEe
Confidence 7889999999999983
No 230
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=23.36 E-value=1.9e+02 Score=19.98 Aligned_cols=91 Identities=9% Similarity=0.120 Sum_probs=55.0
Q ss_pred HHHHHhhC-CCeEEEEEcCCC-----CCCCCCcEEEeeccChHHhhcCCCcceEEecCCh----hhHHHHHHhCCCeeee
Q psy10186 9 LVTAFSRT-GLTVLWRYEGDS-----IENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV----NSALEAIHYGIPIIGV 78 (124)
Q Consensus 9 ~~~~l~~~-~~~~i~~~g~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~----~t~~ea~~~g~P~l~~ 78 (124)
+++++.+. +.+++.++..+. ..+..+.... +-+..+++..+..|+++-..-. -.+.+++..|+++++=
T Consensus 21 ~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~--~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~E 98 (359)
T 3m2t_A 21 LLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPV--LDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVE 98 (359)
T ss_dssp HHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCE--ESSHHHHHHHSCCSEEEECSCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcc--cCCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEE
Confidence 56777776 568877877653 1112222222 3467777765677887654443 3367889999998884
Q ss_pred -cccc---cHHHHHHHHHHcCceeEec
Q psy10186 79 -PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 -P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
|... |-....+.+++.|.-+.+.
T Consensus 99 KPla~~~~e~~~l~~~a~~~g~~~~v~ 125 (359)
T 3m2t_A 99 KPPCATLEELETLIDAARRSDVVSGVG 125 (359)
T ss_dssp SCSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 6653 2333455556667665554
No 231
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=23.33 E-value=89 Score=20.77 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChH-HhhcCCCcceEEecCChh-----hHHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQ-DVLAHPNCRLFISHGGVN-----SALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~gG~~-----t~~ea~~~g~P~l~~ 78 (124)
.+..+-+++.+.|+.+++.....+.. ...... .++. .++|++|..+... .+.++...|+|++.+
T Consensus 21 ~~~gi~~~a~~~g~~~~~~~~~~~~~---------~~~~~i~~~~~-~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~ 90 (330)
T 3uug_A 21 DGNNIVKQLQEAGYKTDLQYADDDIP---------NQLSQIENMVT-KGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAY 90 (330)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHH---------HHHHHHHHHHH-HTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeeCCCCHH---------HHHHHHHHHHH-cCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEE
Confidence 44555566677899887766332211 001111 1222 5788877665431 144566789999987
Q ss_pred c
Q psy10186 79 P 79 (124)
Q Consensus 79 P 79 (124)
-
T Consensus 91 ~ 91 (330)
T 3uug_A 91 D 91 (330)
T ss_dssp S
T ss_pred C
Confidence 3
No 232
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=23.22 E-value=34 Score=21.25 Aligned_cols=13 Identities=31% Similarity=0.570 Sum_probs=11.4
Q ss_pred CCcceEEecCChh
Q psy10186 51 PNCRLFISHGGVN 63 (124)
Q Consensus 51 ~~~d~~i~~gG~~ 63 (124)
..+|++|+.||.|
T Consensus 80 ~~~DlVittGG~g 92 (178)
T 3iwt_A 80 DEVDVIISTGGTG 92 (178)
T ss_dssp TTCCEEEEESCCS
T ss_pred CCCCEEEecCCcc
Confidence 5799999999975
No 233
>1fw8_A PGK P72, phosphoglycerate kinase; phosphotransferase, glycoly mutant, permutation, permuted sequence, protein foldin domain protein; 2.30A {Saccharomyces cerevisiae} SCOP: c.86.1.1
Probab=23.18 E-value=79 Score=23.06 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh-hhHHHHHHhCCCeeeeccc-
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV-NSALEAIHYGIPIIGVPFY- 81 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~-~t~~ea~~~g~P~l~~P~~- 81 (124)
+.++.+-+++....-.|+.++|+.+.. +.+.+.+ .++ .++|-+|.-||. +|++-|. |...|.-.+.
T Consensus 119 kEl~~l~kal~~p~rP~vaIlGGaKVs---dKi~vi~-----nLl--~kvD~liiGGgma~TFl~A~--G~~~IG~SL~E 186 (416)
T 1fw8_A 119 KELKYFGKALENPTRPFLAILGGAKVA---DKIQLID-----NLL--DKVDSIIIGGGMAFTFKKVL--ENTEIGDSIFD 186 (416)
T ss_dssp HHHHHHHHHHHSCCSSEEEEEECSCST---TTHHHHH-----HHH--TTCSEEEEEGGGHHHHHHHH--SCCCCCSCCCC
T ss_pred HHHHHHHHHHcCCCCCeEEEEcCcchh---hHHHHHH-----HHH--HhhCeeEeChHHHHHHHHHc--CCCccCccccC
Confidence 445666667776667899999988644 3333332 345 789999998884 6777663 4442222222
Q ss_pred ccHHHHHHHHHH----cCceeEec
Q psy10186 82 GDQLSHVRHIVD----LGAGVELS 101 (124)
Q Consensus 82 ~~q~~~a~~~~~----~g~g~~~~ 101 (124)
.|....|+.+-+ .|.-+.+.
T Consensus 187 ~d~~~~a~~ll~kak~~g~~i~lP 210 (416)
T 1fw8_A 187 KAGAEIVPKLMEKAKAKGVEVVLP 210 (416)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEECC
T ss_pred hhhHHHHHHHHHHHHhcCCEEECC
Confidence 244555555433 35544443
No 234
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=23.16 E-value=1.1e+02 Score=17.11 Aligned_cols=47 Identities=17% Similarity=0.090 Sum_probs=30.4
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
..|+|++....+.. ......+.|+--.+. +.++.++|...+++++..
T Consensus 87 ~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~-KP~~~~~L~~~i~~~~~~ 133 (135)
T 3snk_A 87 TVPLIAVSDELTSE-QTRVLVRMNASDWLH-KPLDGKELLNAVTFHDTG 133 (135)
T ss_dssp TCCEEEEESCCCHH-HHHHHHHTTCSEEEE-SSCCHHHHHHHHHHTC--
T ss_pred CCcEEEEeCCCCHH-HHHHHHHcCcHhhcc-CCCCHHHHHHHHHHHhcc
Confidence 67888875544443 344445566655554 467899999999988754
No 235
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=23.02 E-value=72 Score=22.61 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=22.4
Q ss_pred CCcceEEecCChhhHHHH-----HHh------------------CCCeeeeccc
Q psy10186 51 PNCRLFISHGGVNSALEA-----IHY------------------GIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~~gG~~t~~ea-----~~~------------------g~P~l~~P~~ 81 (124)
.++|.+|.=||. +++.+ ..+ ++|++.+|..
T Consensus 87 ~~~D~IIavGGG-sv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT 139 (383)
T 3ox4_A 87 NNSDFVISLGGG-SPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTT 139 (383)
T ss_dssp HTCSEEEEEESH-HHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECS
T ss_pred cCcCEEEEeCCc-HHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCC
Confidence 578999998886 45543 223 8999999985
No 236
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=22.96 E-value=29 Score=23.44 Aligned_cols=45 Identities=11% Similarity=0.065 Sum_probs=29.1
Q ss_pred CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 72 GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 72 g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+|+|++.-..+. .....+.|+--.+. +-++.++|...|++++..
T Consensus 233 ~~piI~lT~~~~~---~~~~~~~G~~~~l~-KP~~~~~L~~~i~~~l~~ 277 (286)
T 3n0r_A 233 DVPVIFITAFPER---LLTGERPEPTFLIT-KPFQPETVKAAIGQALFF 277 (286)
T ss_dssp TCCEEEEESCGGG---GCCSSSCCCSSEEE-SSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCHHH---HHHHHhCCCcEEEe-CCCCHHHHHHHHHHHHHh
Confidence 8999998654332 22223345443443 457899999999998853
No 237
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=22.89 E-value=1.1e+02 Score=17.08 Aligned_cols=57 Identities=18% Similarity=0.154 Sum_probs=35.6
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+++.+.. .+|+|++....+.. ......+.|+--.+. +.++.++|.+.++.++....
T Consensus 71 ~~~~~l~~~~~~~~~~ii~~s~~~~~~-~~~~~~~~g~~~~l~-kP~~~~~l~~~i~~~~~~~~ 132 (143)
T 3cnb_A 71 SICHRIKSTPATANIIVIAMTGALTDD-NVSRIVALGAETCFG-KPLNFTLLEKTIKQLVEQKK 132 (143)
T ss_dssp HHHHHHHTSTTTTTSEEEEEESSCCHH-HHHHHHHTTCSEEEE-SSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCccccCCcEEEEeCCCCHH-HHHHHHhcCCcEEEe-CCCCHHHHHHHHHHHHHhhc
Confidence 34555543 57888775444433 334455667655554 45789999999999886543
No 238
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=22.89 E-value=59 Score=20.45 Aligned_cols=50 Identities=8% Similarity=-0.081 Sum_probs=31.6
Q ss_pred hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 71 YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 71 ~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
...|+|++....+.. ......+.|+--.+. +.++.+++..+++.++....
T Consensus 82 ~~~~ii~lt~~~~~~-~~~~~~~~Ga~~~l~-Kp~~~~~L~~~i~~~~~~~~ 131 (225)
T 3klo_A 82 PDAKEVIINCPQDIE-HKLLFKWNNLAGVFY-IDDDMDTLIKGMSKILQDEM 131 (225)
T ss_dssp TTCEEEEEEECTTCC-HHHHTTSTTEEEEEE-TTCCHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEECCcchh-HHHHHHHhCCCEEEe-cCCCHHHHHHHHHHHHCCCE
Confidence 467888875443322 334444556554454 46689999999999886543
No 239
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=22.81 E-value=1.2e+02 Score=17.39 Aligned_cols=57 Identities=14% Similarity=0.019 Sum_probs=34.4
Q ss_pred hHHHHHH---hCCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcCCC
Q psy10186 64 SALEAIH---YGIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNNPR 122 (124)
Q Consensus 64 t~~ea~~---~g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~~~ 122 (124)
.+++.+. ...|+|++....+... ...+.+.|+--.+. +.++.+++.+++++++....
T Consensus 78 ~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l~-Kp~~~~~l~~~i~~~~~~~~ 137 (152)
T 3eul_A 78 QVAAAVRSYELPTRVLLISAHDEPAI-VYQALQQGAAGFLL-KDSTRTEIVKAVLDCAKGRD 137 (152)
T ss_dssp HHHHHHHHTTCSCEEEEEESCCCHHH-HHHHHHTTCSEEEE-TTCCHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHhcCCCCeEEEEEccCCHHH-HHHHHHcCCCEEEe-cCCCHHHHHHHHHHHHcCCe
Confidence 3444443 3567777654444433 34444566655554 45689999999999886544
No 240
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=22.80 E-value=1.9e+02 Score=19.77 Aligned_cols=92 Identities=13% Similarity=0.041 Sum_probs=53.1
Q ss_pred HHHHHHhhC--CCeEEEEEcCCCCC-----CCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCee
Q psy10186 8 LLVTAFSRT--GLTVLWRYEGDSIE-----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPII 76 (124)
Q Consensus 8 ~~~~~l~~~--~~~~i~~~g~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l 76 (124)
..+.++.+. +.+++.++..+... +..+.. .-|-+..+++..+.+|+++--.. .-.+.+|+..|++++
T Consensus 33 ~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~--~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 33 LHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNP--AVFDSYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVI 110 (340)
T ss_dssp THHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSC--EEESCHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCC--cccCCHHHHhcCCCCCEEEEeCCchHHHHHHHHHHHCCCcEE
Confidence 356677766 36777777665311 011111 22456788886567899644332 244668899999998
Q ss_pred ee-ccccc---HHHHHHHHHHcCceeEec
Q psy10186 77 GV-PFYGD---QLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 77 ~~-P~~~~---q~~~a~~~~~~g~g~~~~ 101 (124)
+= |...+ -....+..++.|.-+.+.
T Consensus 111 ~EKPla~~~~ea~~l~~~a~~~g~~~~v~ 139 (340)
T 1zh8_A 111 CEKPISTDVETGKKVVELSEKSEKTVYIA 139 (340)
T ss_dssp EESSSSSSHHHHHHHHHHHHHCSSCEEEE
T ss_pred EeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 85 66432 233444445567655554
No 241
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=22.76 E-value=1.3e+02 Score=17.84 Aligned_cols=90 Identities=6% Similarity=-0.052 Sum_probs=49.1
Q ss_pred HHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceE-EecCC---hhhHHHHHHhCCCeeeeccc
Q psy10186 6 RTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLF-ISHGG---VNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 6 ~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~gG---~~t~~ea~~~g~P~l~~P~~ 81 (124)
-..+++.+.+.|++ +|-+.++...+.-..+.+.. +-.++- ..+|++ |+-.. ...+-|+...|+..+++-..
T Consensus 29 G~~~~~~l~~~G~~-v~~vnp~~~~~~i~G~~~~~--sl~el~--~~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 29 AHYVPRYLREQGYR-VLPVNPRFQGEELFGEEAVA--SLLDLK--EPVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp HHHHHHHHHHTTCE-EEEECGGGTTSEETTEECBS--SGGGCC--SCCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred HHHHHHHHHHCCCE-EEEeCCCcccCcCCCEEecC--CHHHCC--CCCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34566667777776 45444331011011222222 122222 356764 33332 23456788899998877555
Q ss_pred ccHHHHHHHHHHcCceeEe
Q psy10186 82 GDQLSHVRHIVDLGAGVEL 100 (124)
Q Consensus 82 ~~q~~~a~~~~~~g~g~~~ 100 (124)
..|...++.+++.|+-++-
T Consensus 104 ~~~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 104 IRHPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCCHHHHHHHHHTTCCEEE
T ss_pred cCHHHHHHHHHHcCCEEEc
Confidence 5677778888888876544
No 242
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=22.69 E-value=1.1e+02 Score=19.87 Aligned_cols=65 Identities=11% Similarity=0.157 Sum_probs=32.9
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh-h---h-HHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV-N---S-ALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~-~---t-~~ea~~~g~P~l~~ 78 (124)
.+..+.+++.+.|+.+++.....+.... ...+ ..++. .++|++|..+.. . . +..+...|+|++.+
T Consensus 19 ~~~gi~~~~~~~g~~~~~~~~~~~~~~~------~~~i--~~l~~-~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 19 LKNGAEEKAKELGYKIIVEDSQNDSSKE------LSNV--EDLIQ-QKVDVLLINPVDSDAVVTAIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTCHHHH------HHHH--HHHHH-TTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCcEEEEecCCCCHHHH------HHHH--HHHHH-cCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEe
Confidence 3444455566778888775432211100 0111 11222 678887765432 1 1 23344579999886
No 243
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=22.55 E-value=79 Score=22.32 Aligned_cols=75 Identities=16% Similarity=0.255 Sum_probs=42.8
Q ss_pred HHHHHHHhhCC-CeEEEEEcCCC-------CCCCCCcEEEeeccCh---H------HhhcCCCcceEEecCChhhHHHH-
Q psy10186 7 TLLVTAFSRTG-LTVLWRYEGDS-------IENLPGNVHIRKWIPQ---Q------DVLAHPNCRLFISHGGVNSALEA- 68 (124)
Q Consensus 7 ~~~~~~l~~~~-~~~i~~~g~~~-------~~~~~~~v~~~~~~~~---~------~~l~~~~~d~~i~~gG~~t~~ea- 68 (124)
+.+.+.+.+.+ -++++++++.. .........+.+..+. . +.+...++|.+|.=||. +++.+
T Consensus 26 ~~l~~~l~~~g~~rvliVtd~~~~~~~~~v~~~L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG-s~iD~a 104 (364)
T 3iv7_A 26 AFLKQEVERRGSAKVMVIAGEREMSIAHKVASEIEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGG-STIGLA 104 (364)
T ss_dssp HHHHHHHHHHTCSSEEEECCGGGHHHHHHHTTTSCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESH-HHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHHcCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCc-HHHHHH
Confidence 34455566666 47888887642 1112222222222221 1 12222689999998886 55543
Q ss_pred ----HHhCCCeeeecccc
Q psy10186 69 ----IHYGIPIIGVPFYG 82 (124)
Q Consensus 69 ----~~~g~P~l~~P~~~ 82 (124)
...++|++.+|...
T Consensus 105 K~iA~~~~~P~i~IPTTa 122 (364)
T 3iv7_A 105 KAIAMTTALPIVAIPTTY 122 (364)
T ss_dssp HHHHHHHCCCEEEEECSS
T ss_pred HHHHhccCCCEEEEcCCc
Confidence 56799999999864
No 244
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=22.37 E-value=1.9e+02 Score=19.72 Aligned_cols=83 Identities=16% Similarity=0.171 Sum_probs=50.1
Q ss_pred CCeEEEEEcCCCCC----CCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-ccccc---H
Q psy10186 17 GLTVLWRYEGDSIE----NLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV-PFYGD---Q 84 (124)
Q Consensus 17 ~~~~i~~~g~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~-P~~~~---q 84 (124)
+.+++.++..+... ....++.+ |-+..+++..+.+|+++.-.- .-.+.+++..|+++++= |...+ -
T Consensus 28 ~~~l~av~d~~~~~~~~~~~~~~~~~--~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~ 105 (345)
T 3f4l_A 28 SWHVAHIFRRHAKPEEQAPIYSHIHF--TSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQA 105 (345)
T ss_dssp TEEEEEEECSSCCGGGGSGGGTTCEE--ESCTHHHHTCTTEEEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHH
T ss_pred CeEEEEEEcCCHhHHHHHHhcCCCce--ECCHHHHhcCCCCCEEEEcCChHHHHHHHHHHHHcCCcEEEeCCCCCCHHHH
Confidence 46777777665311 11223333 346778886567899654443 24567889999999985 66532 3
Q ss_pred HHHHHHHHHcCceeEec
Q psy10186 85 LSHVRHIVDLGAGVELS 101 (124)
Q Consensus 85 ~~~a~~~~~~g~g~~~~ 101 (124)
....+.+++.|.-+.+.
T Consensus 106 ~~l~~~a~~~g~~~~v~ 122 (345)
T 3f4l_A 106 KELFALAKSKGLTVTPY 122 (345)
T ss_dssp HHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 33455556667766554
No 245
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=22.32 E-value=61 Score=23.62 Aligned_cols=34 Identities=26% Similarity=0.528 Sum_probs=25.4
Q ss_pred HHhhcCCCcceEEecCChhhHHHHHHhCCCeeee
Q psy10186 45 QDVLAHPNCRLFISHGGVNSALEAIHYGIPIIGV 78 (124)
Q Consensus 45 ~~~l~~~~~d~~i~~gG~~t~~ea~~~g~P~l~~ 78 (124)
..++.|+..|.++..||....-.+...++|++..
T Consensus 184 ~~L~~~~~vd~I~fTGs~~v~~~a~~~~kpvlel 217 (464)
T 3k9d_A 184 DQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGV 217 (464)
T ss_dssp HHHHHCTTEEEEEECSCHHHHHHHTTSSSCEEEB
T ss_pred HHHHhCCCCCEEEEeCChHHHHHHHhcCCcEEee
Confidence 4577778899999999987655566677787544
No 246
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=22.28 E-value=1.6e+02 Score=18.88 Aligned_cols=23 Identities=0% Similarity=-0.120 Sum_probs=14.8
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcC
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEG 26 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~ 26 (124)
+.+..+.+++.+.|+.+++....
T Consensus 25 ~~~~gi~~~a~~~g~~~~~~~~~ 47 (277)
T 3cs3_A 25 ELLEGIKKGLALFDYEMIVCSGK 47 (277)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEST
T ss_pred HHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555566667788888776543
No 247
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=22.21 E-value=37 Score=21.07 Aligned_cols=12 Identities=17% Similarity=0.637 Sum_probs=10.7
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 72 ~~DlVittGG~g 83 (169)
T 1y5e_A 72 DVDVVLTNGGTG 83 (169)
T ss_dssp TCSEEEEECCCS
T ss_pred CCCEEEEcCCCC
Confidence 799999999974
No 248
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=22.19 E-value=2e+02 Score=19.88 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=54.1
Q ss_pred HHHHHhhC-CCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-cc
Q psy10186 9 LVTAFSRT-GLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV-PF 80 (124)
Q Consensus 9 ~~~~l~~~-~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~-P~ 80 (124)
.+..+... +.+++.++..+.. ....+...+ |-+..+++..+.+|+++.-.- .-.+.+++..|+++++= |.
T Consensus 23 ~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EKPl 100 (364)
T 3e82_A 23 HAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTV--IASPEAAVQHPDVDLVVIASPNATHAPLARLALNAGKHVVVDKPF 100 (364)
T ss_dssp HHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEE--ESCHHHHHTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCS
T ss_pred HHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcE--ECCHHHHhcCCCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeCCC
Confidence 34556665 4677777766531 111122332 457788886568898654433 24467889999999885 65
Q ss_pred cc---cHHHHHHHHHHcCceeEec
Q psy10186 81 YG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 81 ~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
.. |-....+.+++.|.-+.+.
T Consensus 101 a~~~~e~~~l~~~a~~~g~~~~v~ 124 (364)
T 3e82_A 101 TLDMQEARELIALAEEKQRLLSVF 124 (364)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHHHHHHHHHHhCCeEEEE
Confidence 43 2233445556667666554
No 249
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.98 E-value=1.1e+02 Score=16.63 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=31.6
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHhcC
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVLNN 120 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll~~ 120 (124)
.+++.+.. .+|++++.-..+ ........+.|+--.+. +.++.+++...+++++..
T Consensus 62 ~~~~~l~~~~~~~~~~ii~~s~~~~-~~~~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 62 EVTKWLKEDDDLAHIPVVAVTAFAM-KGDEERIREGGCEAYIS-KPISVVHFLETIKRLLER 121 (124)
T ss_dssp HHHHHHHHSTTTTTSCEEEEC-------CHHHHHHHTCSEEEC-SSCCHHHHHHHHHHHHSC
T ss_pred HHHHHHHcCccccCCcEEEEECCCC-HHHHHHHHhCCCCEEEe-CCCCHHHHHHHHHHHHhc
Confidence 34555542 578888743332 23334444566654444 457899999999998754
No 250
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=21.92 E-value=2e+02 Score=19.71 Aligned_cols=91 Identities=18% Similarity=0.085 Sum_probs=53.5
Q ss_pred HHHHHhhC-CCeEEEEEcCCCCCCC-----CCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee
Q psy10186 9 LVTAFSRT-GLTVLWRYEGDSIENL-----PGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV 78 (124)
Q Consensus 9 ~~~~l~~~-~~~~i~~~g~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~ 78 (124)
.+..+... +.+++.++..+..... .+++.. |-+..+++..+.+|+++.-.. .-.+..++..|+++++=
T Consensus 18 ~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~--~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~E 95 (349)
T 3i23_A 18 HLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNF--TADLNELLTDPEIELITICTPAHTHYDLAKQAILAGKSVIVE 95 (349)
T ss_dssp THHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEE--ESCTHHHHSCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeE--ECCHHHHhcCCCCCEEEEeCCcHHHHHHHHHHHHcCCEEEEE
Confidence 34556555 4678777766521110 023333 346788886567898654333 24467899999999984
Q ss_pred -cccc---cHHHHHHHHHHcCceeEec
Q psy10186 79 -PFYG---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 79 -P~~~---~q~~~a~~~~~~g~g~~~~ 101 (124)
|... |-....+.+++.|.-+.+.
T Consensus 96 KP~a~~~~e~~~l~~~a~~~g~~~~v~ 122 (349)
T 3i23_A 96 KPFCDTLEHAEELFALGQEKGVVVMPY 122 (349)
T ss_dssp SCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCcCCHHHHHHHHHHHHHcCCeEEEE
Confidence 6543 2233455556667766554
No 251
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=21.90 E-value=1e+02 Score=20.35 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=25.9
Q ss_pred CCcceEEecCChh---------------------------hHHHHHHhCCCeeeecccccHHHHH
Q psy10186 51 PNCRLFISHGGVN---------------------------SALEAIHYGIPIIGVPFYGDQLSHV 88 (124)
Q Consensus 51 ~~~d~~i~~gG~~---------------------------t~~ea~~~g~P~l~~P~~~~q~~~a 88 (124)
..+|++|-.||.+ .+-+++..++|++.+ +.+-|..+.
T Consensus 60 ~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGI-C~G~Qll~~ 123 (254)
T 3fij_A 60 SLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAI-CRGMQLVNV 123 (254)
T ss_dssp HTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEE-THHHHHHHH
T ss_pred hhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEE-CHHHHHHHH
Confidence 5789998888832 133566789999997 345666554
No 252
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=21.87 E-value=95 Score=23.38 Aligned_cols=37 Identities=3% Similarity=-0.129 Sum_probs=27.9
Q ss_pred HHHHHHcCceeEec-CCCCCHHHHHHHHHHHhcCCCCC
Q psy10186 88 VRHIVDLGAGVELS-YFNITLESIAWATSIVLNNPRRY 124 (124)
Q Consensus 88 a~~~~~~g~g~~~~-~~~~~~~~l~~~l~~ll~~~~~r 124 (124)
|+.++..+..+++. .+.+++....-+|.+++-||-||
T Consensus 334 a~~l~~~~~sVLvhcsdGwDrT~ql~SLaqllLDPyyR 371 (528)
T 1zsq_A 334 ADKVESGKTSVVVHSSDGWDRTAQLTSLAMLMLDGYYR 371 (528)
T ss_dssp HHHHHTTCCCEEEECSSSSSHHHHHHHHHHHHHCGGGG
T ss_pred HHHHHcCCceEEEECCCCccchHHHHHHHHHHcCcccc
Confidence 44445556677776 46788888888999999999887
No 253
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=21.84 E-value=1.7e+02 Score=18.88 Aligned_cols=67 Identities=18% Similarity=0.125 Sum_probs=35.8
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh-----hhHHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV-----NSALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~-----~t~~ea~~~g~P~l~~P 79 (124)
.+..+.+++.+.|+.+++.....+.. ......+.+...++|++|..+.. ..+-++...|+|++.+-
T Consensus 23 ~~~gi~~~a~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (291)
T 3l49_A 23 AYQAQIAEIERLGGTAIALDAGRNDQ---------TQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVD 93 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHH---------HHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCCEEEEEcCCCCHH---------HHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEec
Confidence 45556666778898888775432211 00111111112578887765543 12233455799999874
Q ss_pred c
Q psy10186 80 F 80 (124)
Q Consensus 80 ~ 80 (124)
.
T Consensus 94 ~ 94 (291)
T 3l49_A 94 T 94 (291)
T ss_dssp C
T ss_pred C
Confidence 3
No 254
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=21.77 E-value=89 Score=23.22 Aligned_cols=74 Identities=16% Similarity=0.148 Sum_probs=47.7
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCC----CCCC-CcEEEeeccChH-Hhhc-------CCCcceEEecCCh------hhH
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSI----ENLP-GNVHIRKWIPQQ-DVLA-------HPNCRLFISHGGV------NSA 65 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~----~~~~-~~v~~~~~~~~~-~~l~-------~~~~d~~i~~gG~------~t~ 65 (124)
..+.+++.|.+.|++.++.+.++.. .... ..++++.-.... ..++ ..+..++++|.|. +.+
T Consensus 6 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v~~~TsGpG~~N~~~~l 85 (563)
T 2uz1_A 6 GGELVVRTLIKAGVEHLFGLHGAHIDTIFQACLDHDVPIIDTRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNAVTPI 85 (563)
T ss_dssp HHHHHHHHHHHHTCCCEEECCCGGGHHHHHHHHHHTCCEEECSSHHHHHHHHHHHHHHHTSCEEEEECTTHHHHTTHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCchHHHHHHHHhcCCcEEeeCCHHHHHHHHHHHHHHhCCCEEEEEccCccHHHHHHHH
Confidence 3467888999999988888766531 1000 124444433311 1110 1456778999986 678
Q ss_pred HHHHHhCCCeeee
Q psy10186 66 LEAIHYGIPIIGV 78 (124)
Q Consensus 66 ~ea~~~g~P~l~~ 78 (124)
.||...++|+|++
T Consensus 86 ~~A~~~~~Pll~i 98 (563)
T 2uz1_A 86 ANAWLDRTPVLFL 98 (563)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHhcCCCEEEE
Confidence 8999999999998
No 255
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=21.71 E-value=1.7e+02 Score=18.79 Aligned_cols=62 Identities=6% Similarity=-0.148 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh--hHHHHHHhCCCeeee
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN--SALEAIHYGIPIIGV 78 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~--t~~ea~~~g~P~l~~ 78 (124)
+.+..+.+++.+.|+.+++.... +.... ....+.+...++|++| .+... ..++. .|+|++.+
T Consensus 22 ~~~~gi~~~a~~~g~~~~~~~~~-~~~~~---------~~~~~~l~~~~vdgiI-~~~~~~~~~~~~--~~iPvV~~ 85 (280)
T 3gyb_A 22 DLIQSLSDVLTPKGYRLSVIDSL-TSQAG---------TDPITSALSMRPDGII-IAQDIPDFTVPD--SLPPFVIA 85 (280)
T ss_dssp HHHHHHHHHHGGGTCEEEEECSS-SSCSS---------SCHHHHHHTTCCSEEE-EESCC----------CCCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEeCC-CchHH---------HHHHHHHHhCCCCEEE-ecCCCChhhHhh--cCCCEEEE
Confidence 44556666777889988877654 22211 1222222336788888 43321 12222 78999886
No 256
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=21.67 E-value=40 Score=21.18 Aligned_cols=12 Identities=33% Similarity=0.952 Sum_probs=10.5
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 68 ~~DlVittGG~g 79 (178)
T 2pbq_A 68 GCSLILTTGGTG 79 (178)
T ss_dssp CCSEEEEESCCS
T ss_pred CCCEEEECCCCC
Confidence 799999999963
No 257
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=21.67 E-value=2.1e+02 Score=19.85 Aligned_cols=51 Identities=14% Similarity=0.087 Sum_probs=30.4
Q ss_pred HHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCC
Q psy10186 7 TLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG 61 (124)
Q Consensus 7 ~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG 61 (124)
..+++.+..+|.+++.. ...... ...--....+.+..+++ +.+|+++.|.-
T Consensus 153 ~~vA~~l~~~G~~V~~~-dr~~~~-~~~~~~~~~~~~l~ell--~~aDvV~l~lP 203 (324)
T 3hg7_A 153 QHIAHTGKHFGMKVLGV-SRSGRE-RAGFDQVYQLPALNKML--AQADVIVSVLP 203 (324)
T ss_dssp HHHHHHHHHTTCEEEEE-CSSCCC-CTTCSEEECGGGHHHHH--HTCSEEEECCC
T ss_pred HHHHHHHHhCCCEEEEE-cCChHH-hhhhhcccccCCHHHHH--hhCCEEEEeCC
Confidence 45777888889887644 222211 11111223455667777 78999988864
No 258
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=21.28 E-value=36 Score=22.85 Aligned_cols=31 Identities=35% Similarity=0.571 Sum_probs=22.6
Q ss_pred CCcceEEe---cC----------C-hhhHHHHHHhCCCeeeeccc
Q psy10186 51 PNCRLFIS---HG----------G-VNSALEAIHYGIPIIGVPFY 81 (124)
Q Consensus 51 ~~~d~~i~---~g----------G-~~t~~ea~~~g~P~l~~P~~ 81 (124)
.+-|+||| || | .+..+||..+|+|.|.+-..
T Consensus 84 ~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 84 KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 35688876 33 2 25567999999999998653
No 259
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=20.95 E-value=1.5e+02 Score=19.35 Aligned_cols=68 Identities=16% Similarity=-0.001 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCChh-----hHHHHHHhCCCeeeec
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGVN-----SALEAIHYGIPIIGVP 79 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~~-----t~~ea~~~g~P~l~~P 79 (124)
.+..+-+++.+.|+.+++....... + .........+...++|++|..+... .+-++...|+|++.+-
T Consensus 22 ~~~gi~~~a~~~g~~~~~~~~~~~~---~-----~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 22 CLKGFEDAAQALNVTVEYRGAAQYD---I-----QEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp HHHHHHHHHHHHTCEEEEEECSSSC---H-----HHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcCC---H-----HHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 3444555566778888774322110 0 0001111111125788877655322 2344556799999874
Q ss_pred c
Q psy10186 80 F 80 (124)
Q Consensus 80 ~ 80 (124)
.
T Consensus 94 ~ 94 (305)
T 3g1w_A 94 S 94 (305)
T ss_dssp S
T ss_pred C
Confidence 3
No 260
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=20.93 E-value=2.1e+02 Score=19.67 Aligned_cols=90 Identities=9% Similarity=0.062 Sum_probs=52.9
Q ss_pred HHHHhhC-CCeEEEEEcCCCC--CCCCCcEEEeeccChHHhhcCCCcceEEecCC----hhhHHHHHHhCCCeeee-ccc
Q psy10186 10 VTAFSRT-GLTVLWRYEGDSI--ENLPGNVHIRKWIPQQDVLAHPNCRLFISHGG----VNSALEAIHYGIPIIGV-PFY 81 (124)
Q Consensus 10 ~~~l~~~-~~~~i~~~g~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG----~~t~~ea~~~g~P~l~~-P~~ 81 (124)
+..+... +.+++.++..+.. .+..+.+.. |-+..+++..+.+|+++--.. .-.+..|+..|+++++= |..
T Consensus 22 ~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~--~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla 99 (358)
T 3gdo_A 22 GPLLDVLDEYQISKIMTSRTEEVKRDFPDAEV--VHELEEITNDPAIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMT 99 (358)
T ss_dssp HHHHTTCTTEEEEEEECSCHHHHHHHCTTSEE--ESSTHHHHTCTTCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHhhCCCeEEEEEEcCCHHHHHhhCCCCce--ECCHHHHhcCCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCc
Confidence 4556665 4677777766531 111123332 346778886568898654333 24567899999999984 654
Q ss_pred c---cHHHHHHHHHHcCceeEec
Q psy10186 82 G---DQLSHVRHIVDLGAGVELS 101 (124)
Q Consensus 82 ~---~q~~~a~~~~~~g~g~~~~ 101 (124)
. |-....+.+++.|.-+.+.
T Consensus 100 ~~~~e~~~l~~~a~~~g~~~~v~ 122 (358)
T 3gdo_A 100 ATAEEGETLKRAADEKGVLLSVY 122 (358)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCeEEEe
Confidence 3 2333445556667665554
No 261
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.85 E-value=41 Score=20.96 Aligned_cols=12 Identities=17% Similarity=0.553 Sum_probs=10.5
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 69 ~~DlVittGG~g 80 (172)
T 1mkz_A 69 DVQVVLITGGTG 80 (172)
T ss_dssp SCCEEEEESCCS
T ss_pred CCCEEEeCCCCC
Confidence 499999999974
No 262
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=20.84 E-value=42 Score=20.66 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=10.6
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 62 ~~DlVittGG~g 73 (164)
T 2is8_A 62 GLDLILTNGGTG 73 (164)
T ss_dssp CCSEEEEESCCS
T ss_pred CCCEEEEcCCCC
Confidence 699999999974
No 263
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.79 E-value=1.5e+02 Score=19.13 Aligned_cols=65 Identities=6% Similarity=-0.072 Sum_probs=33.7
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCCCCCCCCcEEEeeccChHHhhcCCCcceEEecCCh--hh-HHHHHHhCCCeeee
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDSIENLPGNVHIRKWIPQQDVLAHPNCRLFISHGGV--NS-ALEAIHYGIPIIGV 78 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~gG~--~t-~~ea~~~g~P~l~~ 78 (124)
.+..+.+++.+.|+.+++........ ......+.+....+|++|..+.. .. +-.+...|+|++.+
T Consensus 31 ~~~gi~~~a~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~~~iPvV~~ 98 (292)
T 3k4h_A 31 VIRGISSFAHVEGYALYMSTGETEEE---------IFNGVVKMVQGRQIGGIILLYSRENDRIIQYLHEQNFPFVLI 98 (292)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSHHH---------HHHHHHHHHHTTCCCEEEESCCBTTCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCHH---------HHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHHCCCCEEEE
Confidence 34455556667788776643221100 00112222333678887765532 12 33345779999886
No 264
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=20.65 E-value=1.3e+02 Score=17.16 Aligned_cols=53 Identities=23% Similarity=0.262 Sum_probs=33.8
Q ss_pred hHHHHHHh-----CCCeeeecccccHHHHHHHHHHcCceeEecCCCCCHHHHHHHHHHHh
Q psy10186 64 SALEAIHY-----GIPIIGVPFYGDQLSHVRHIVDLGAGVELSYFNITLESIAWATSIVL 118 (124)
Q Consensus 64 t~~ea~~~-----g~P~l~~P~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~l~~ll 118 (124)
.+++.+.. ..|+|++.-..+... .....+.|+--.+. +.++.++|.++|+++.
T Consensus 76 ~~~~~lr~~~~~~~~pii~~t~~~~~~~-~~~~~~~g~~~~l~-KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 76 DILKLVKENPHTRRSPVVILTTTDDQRE-IQRCYDLGANVYIT-KPVNYENFANAIRQLG 133 (152)
T ss_dssp HHHHHHHHSTTTTTSCEEEEESCCCHHH-HHHHHHTTCSEEEE-CCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccCCCEEEEecCCCHHH-HHHHHHCCCcEEEe-CCCCHHHHHHHHHHHH
Confidence 45555544 678888765544433 34455566655554 4678999999998875
No 265
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=20.43 E-value=43 Score=20.76 Aligned_cols=12 Identities=17% Similarity=0.623 Sum_probs=10.5
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 66 ~~DlVittGG~s 77 (164)
T 3pzy_A 66 DVDVILTSGGTG 77 (164)
T ss_dssp TCSEEEEESCCS
T ss_pred CCCEEEECCCCC
Confidence 799999999963
No 266
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=20.29 E-value=44 Score=21.28 Aligned_cols=12 Identities=25% Similarity=0.620 Sum_probs=10.6
Q ss_pred CcceEEecCChh
Q psy10186 52 NCRLFISHGGVN 63 (124)
Q Consensus 52 ~~d~~i~~gG~~ 63 (124)
.+|++|+.||.+
T Consensus 78 ~~DlVIttGGtg 89 (189)
T 1jlj_A 78 ELNLILTTGGTG 89 (189)
T ss_dssp CCSEEEEESCCS
T ss_pred CCCEEEEcCCCC
Confidence 799999999973
No 267
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=20.27 E-value=84 Score=22.91 Aligned_cols=29 Identities=21% Similarity=0.403 Sum_probs=22.5
Q ss_pred CcceEEecCChhhHHHH-----HHhCCCeeeeccc
Q psy10186 52 NCRLFISHGGVNSALEA-----IHYGIPIIGVPFY 81 (124)
Q Consensus 52 ~~d~~i~~gG~~t~~ea-----~~~g~P~l~~P~~ 81 (124)
++|++|.=||. +++.+ ...|+|++.+|..
T Consensus 145 ~~D~IIAvGGG-SviD~AK~iA~~~giP~I~IPTT 178 (450)
T 1ta9_A 145 DTQVIIGVGGG-KTMDSAKYIAHSMNLPSIICPTT 178 (450)
T ss_dssp TCCEEEEEESH-HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEeCCc-HHHHHHHHHHHhcCCCEEEEeCC
Confidence 78999988875 45543 4569999999985
No 268
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=20.13 E-value=1.2e+02 Score=17.32 Aligned_cols=25 Identities=4% Similarity=0.024 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhCCCeEEEEEcCCC
Q psy10186 4 GMRTLLVTAFSRTGLTVLWRYEGDS 28 (124)
Q Consensus 4 ~~~~~~~~~l~~~~~~~i~~~g~~~ 28 (124)
+...+.++.+.+.|+++++.+|+..
T Consensus 27 ~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 27 LDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred HHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 3455667888888999999998864
No 269
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=20.11 E-value=88 Score=23.22 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhCCCeEEEEEcCCC-------CCCCCCcEEEeeccChH-Hhhc-----C-CCcceEEecCCh------hh
Q psy10186 5 MRTLLVTAFSRTGLTVLWRYEGDS-------IENLPGNVHIRKWIPQQ-DVLA-----H-PNCRLFISHGGV------NS 64 (124)
Q Consensus 5 ~~~~~~~~l~~~~~~~i~~~g~~~-------~~~~~~~v~~~~~~~~~-~~l~-----~-~~~d~~i~~gG~------~t 64 (124)
..+.+++.|.+.|++.++.+.++. ..+ .+.++++.-.... ..++ . ....+++++.|. +.
T Consensus 6 ~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~al~~-~~~i~~v~~~~E~~Aa~~A~Gyar~tg~~v~~~TsGpG~~N~~~g 84 (563)
T 2vk8_A 6 LGKYLFERLKQVNVNTVFGLPGDFNLSLLDKIYE-VEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNG 84 (563)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGHHHHHGGGG-STTCEECCCSSHHHHHHHHHHHHHHHSCEEEEEETTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHhh-cCCceEEccCchHHHHHHHHHHHHhhCCcEEEEcCCCcHHHHHHH
Confidence 346788999999999988877653 121 2346655543311 1111 0 224568888884 55
Q ss_pred HHHHHHhCCCeeeec
Q psy10186 65 ALEAIHYGIPIIGVP 79 (124)
Q Consensus 65 ~~ea~~~g~P~l~~P 79 (124)
+.+|...++|+|++.
T Consensus 85 ia~A~~~~~Pll~it 99 (563)
T 2vk8_A 85 IAGSYAEHVGVLHVV 99 (563)
T ss_dssp HHHHHHHTCCEEEEE
T ss_pred HHHHHhhCCCEEEEE
Confidence 889999999999984
Done!