BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10187
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CY27|TECR_MOUSE Very-long-chain enoyl-CoA reductase OS=Mus musculus GN=Tecr PE=1
SV=1
Length = 308
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA +C+ HY KR+LETLFVHRFSH TMP+ N+FKNC YYWGF A++AY++NHPL++
Sbjct: 126 VVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
Query: 61 PPNF--VQVFVGLAAF 74
PP + QV + LA F
Sbjct: 186 PPTYGVQQVKLALAVF 201
>sp|Q64232|TECR_RAT Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus GN=Tecr
PE=2 SV=1
Length = 308
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA +C+ HY KR+LETLFVHRFSH TMP+ N+FKNC YYWGF A++AY++NHPL++
Sbjct: 126 VVHLACMCHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
Query: 61 PPNF--VQVFVGLAAF 74
PP + QV + LA F
Sbjct: 186 PPTYGVQQVKLALAIF 201
>sp|Q3ZCD7|TECR_BOVIN Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1
Length = 308
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA +C+ HY KR+LETLFVHRFSH TMP+ N+FKNC YYWGF A++AY++NHPL++
Sbjct: 126 VVHLACICHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
Query: 61 PPNF--VQVFVGLAAF 74
PP + QV + LA F
Sbjct: 186 PPTYGAQQVKLALAIF 201
>sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1
SV=1
Length = 308
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA +C+ HY KR+LETLFVHRFSH TMP+ N+FKNC YYWGF A++AY++NHPL++
Sbjct: 126 VVHLACICHSFHYIKRLLETLFVHRFSHGTMPLRNIFKNCTYYWGFAAWMAYYINHPLYT 185
Query: 61 PPNF--VQVFVGLAAF 74
PP + QV + LA F
Sbjct: 186 PPTYGAQQVKLALAIF 201
>sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum
GN=gpsn2 PE=3 SV=1
Length = 300
Score = 97.1 bits (240), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/69 (60%), Positives = 53/69 (76%)
Query: 4 LAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFSPPN 63
+A +CY +HY KR+ ET+FVHRFSH TMPI NLFKNC YYWG TA V+Y VNHPL++
Sbjct: 128 VALVCYSLHYIKRIYETIFVHRFSHGTMPIFNLFKNCSYYWGCTAMVSYFVNHPLYTEAP 187
Query: 64 FVQVFVGLA 72
+V++GL
Sbjct: 188 IERVYLGLG 196
>sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1
OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1
Length = 308
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 2 VSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFSP 61
V +A + HY KR+ ET F+HRF ++TMP NL KNC YYWGF A+VAY VNHPLF+P
Sbjct: 127 VQIAFFAWSFHYAKRLFETQFIHRFGNSTMPQFNLVKNCSYYWGFAAFVAYFVNHPLFTP 186
Query: 62 PNF--VQVFVGLAAF 74
P F +QV+ GLA F
Sbjct: 187 PAFGDLQVYFGLAGF 201
>sp|Q9M2U2|ECR_ARATH Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana GN=ECR
PE=2 SV=1
Length = 310
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 49/61 (80%)
Query: 12 HYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFSPPNFVQVFVGL 71
HY KR+LET FVHRFSHAT PI N+F+NC YYW F AY+AY+VNHPL++P + +Q+ +G
Sbjct: 141 HYFKRILETFFVHRFSHATSPIGNVFRNCAYYWSFGAYIAYYVNHPLYTPVSDLQMKIGF 200
Query: 72 A 72
Sbjct: 201 G 201
>sp|Q5HYJ1|TECRL_HUMAN Trans-2,3-enoyl-CoA reductase-like OS=Homo sapiens GN=TECRL PE=2
SV=1
Length = 363
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA C+ +HY + +LETLFVH+ S P+ NL +C +YWGFT+++AY++NHPL++
Sbjct: 182 VVHLACFCHCIHYIRYLLETLFVHKVSAGHTPLKNLIMSCAFYWGFTSWIAYYINHPLYT 241
Query: 61 PPNFVQVFVGLAA 73
PP+F + ++A
Sbjct: 242 PPSFGNRQITVSA 254
>sp|Q3SZ89|TECRL_BOVIN Trans-2,3-enoyl-CoA reductase-like OS=Bos taurus GN=TECRL PE=2 SV=1
Length = 363
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA C+ +HY + +LETLFVH+ S + NL K+C +YWGFT+++AY++NHP ++
Sbjct: 182 VVHLACFCHCIHYIRYLLETLFVHKVSSGHTSLKNLLKSCAFYWGFTSWIAYYINHPRYT 241
Query: 61 PPNFVQVFVGLAA 73
PP+F V ++A
Sbjct: 242 PPSFGYRQVAISA 254
>sp|Q8BFZ1|TECRL_MOUSE Trans-2,3-enoyl-CoA reductase-like OS=Mus musculus GN=Tecrl PE=2
SV=1
Length = 361
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 3/80 (3%)
Query: 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFS 60
+V LA C+ +HY + +LETLFVH+ S P+ NL K C +YWGFT+++AY++NHP ++
Sbjct: 180 VVHLAFFCHCIHYIRLLLETLFVHKVSTGHSPMKNLIKGCAFYWGFTSWMAYYINHPRYT 239
Query: 61 PPNF--VQVFVGLAAFAEFC 78
PP+F QV V F FC
Sbjct: 240 PPSFGNRQVIVSAINFL-FC 258
>sp|Q99190|TSC13_YEAST Very-long-chain enoyl-CoA reductase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TSC13 PE=1 SV=1
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 12 HYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAY 52
HY KR+ ETLFVH+FS ATMPI NLFKNC +YW + +++
Sbjct: 137 HYGKRLFETLFVHQFSLATMPIFNLFKNCFHYWVLSGLISF 177
>sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1
Length = 295
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 3 SLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYY 43
+A + ++H+ KR E++FVHRFS ATMP+ N+FKNC +Y
Sbjct: 120 KIAFVLVMLHFMKREYESIFVHRFSLATMPLRNIFKNCAHY 160
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.335 0.143 0.489
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,436,111
Number of Sequences: 539616
Number of extensions: 985384
Number of successful extensions: 2938
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2926
Number of HSP's gapped (non-prelim): 13
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.7 bits)
S2: 55 (25.8 bits)