Query psy10187
Match_columns 78
No_of_seqs 115 out of 254
Neff 4.8
Searched_HMMs 46136
Date Fri Aug 16 20:05:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10187.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10187hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1639|consensus 100.0 3.3E-33 7.1E-38 209.2 6.5 76 1-76 120-197 (297)
2 PLN02560 enoyl-CoA reductase 100.0 1.5E-29 3.2E-34 190.8 6.8 75 1-75 128-202 (308)
3 PLN03164 3-oxo-5-alpha-steroid 98.3 5.7E-07 1.2E-11 69.4 4.4 47 4-50 116-163 (323)
4 KOG1638|consensus 97.2 0.0023 5E-08 48.4 7.4 71 4-75 84-157 (257)
5 PF02544 Steroid_dh: 3-oxo-5-a 97.1 0.0014 3E-08 44.7 5.4 46 29-75 1-50 (150)
6 PLN02392 probable steroid redu 93.9 0.49 1.1E-05 35.7 7.9 73 3-75 79-160 (260)
7 KOG1640|consensus 89.7 2.4 5.2E-05 33.0 7.5 68 5-75 127-202 (304)
8 PF12828 PXB: PX-associated; 24.0 40 0.00086 23.1 0.9 10 9-18 12-21 (137)
9 PF07603 DUF1566: Protein of u 20.6 21 0.00045 22.4 -1.0 33 15-47 56-90 (124)
10 PF10642 Tom5: Mitochondrial i 18.8 65 0.0014 18.7 1.0 10 9-18 40-49 (49)
No 1
>KOG1639|consensus
Probab=99.98 E-value=3.3e-33 Score=209.21 Aligned_cols=76 Identities=62% Similarity=1.139 Sum_probs=72.9
Q ss_pred ChhHHHHHHHHHHHHHhhhHhcccccCCCCccchhhhhhhHHHHHHHHHHHHHhhCCCCCCChh--HHHHHHHHHHHh
Q psy10187 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFSPPNF--VQVFVGLAAFAE 76 (78)
Q Consensus 1 ~~~~~~~~~~lHf~KR~lEtlFVHrfS~~tmP~~n~fkn~~yYw~~~~~~~y~i~~p~~t~p~~--~~~~~gl~lf~e 76 (78)
.|++|+.+|++||.||++||+||||||++|||++|+||||+|||+++++++|++|||.||||+. .|+++|+++|+-
T Consensus 120 ~~~iA~~~~~~Hy~KRl~ET~FvhrFs~atmp~~nlfKnC~~yw~~~~~vaYfvnhp~~t~~~~~~~~~~~~l~~fv~ 197 (297)
T KOG1639|consen 120 LQRIAFFLWLFHYGKRLLETIFVHRFSLATMPIFNLFKNCFYYWGFSALVAYFVNHPLFTPPKLGKLQVKLGLGGFVL 197 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHHHHhhHHHHHHHHHHHHHhcCCCCCCcchhhhhhhhhhHHHhh
Confidence 4899999999999999999999999999999999999999999999999999999999999998 999999988863
No 2
>PLN02560 enoyl-CoA reductase
Probab=99.96 E-value=1.5e-29 Score=190.77 Aligned_cols=75 Identities=52% Similarity=0.991 Sum_probs=71.2
Q ss_pred ChhHHHHHHHHHHHHHhhhHhcccccCCCCccchhhhhhhHHHHHHHHHHHHHhhCCCCCCChhHHHHHHHHHHH
Q psy10187 1 MVSLAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNHPLFSPPNFVQVFVGLAAFA 75 (78)
Q Consensus 1 ~~~~~~~~~~lHf~KR~lEtlFVHrfS~~tmP~~n~fkn~~yYw~~~~~~~y~i~~p~~t~p~~~~~~~gl~lf~ 75 (78)
+|++++++|++||+||++||+||||||++|||++|+||||+|||+++++++|+++||++++++..++++|+++|+
T Consensus 128 ~~~l~~~~~~~Hy~kR~~Et~fvhrfS~~tmpl~n~~~n~~~Yw~~~~~~~y~~~~~~~~~~~~~~~~~g~~lf~ 202 (308)
T PLN02560 128 VQTYAMYYWCFHYAKRILETFFVHRFSHATSPLFNVFRNCAYYWTFGAYIAYFVNHPLYTPVSETQMKVGFGFGL 202 (308)
T ss_pred HHHHHHHHHHHHHHHHhhheeeeEeecCCCccHHHHHHHHHHHHHHHHHHhhhcccCCccccchhHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999888888888888886
No 3
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Probab=98.34 E-value=5.7e-07 Score=69.38 Aligned_cols=47 Identities=23% Similarity=0.407 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHhhhHhcccccCC-CCccchhhhhhhHHHHHHHHHH
Q psy10187 4 LAALCYIVHYTKRVLETLFVHRFSH-ATMPIMNLFKNCGYYWGFTAYV 50 (78)
Q Consensus 4 ~~~~~~~lHf~KR~lEtlFVHrfS~-~tmP~~n~fkn~~yYw~~~~~~ 50 (78)
++..++.+|.+||++|++||++||. ++|.+..-..+..||++....+
T Consensus 116 ~~l~L~~lq~lRRLyEslfVskfS~~SrMhl~hYlvGl~fY~~~~lsl 163 (323)
T PLN03164 116 FLLLLMEIHVLRRLYESLYVFKYSPSARMHILGYLTGLFFYVAAPLSL 163 (323)
T ss_pred HHHHHHHHHHHHHHHheeeEEecCCcceeeHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999996 6999999999999999977643
No 4
>KOG1638|consensus
Probab=97.17 E-value=0.0023 Score=48.38 Aligned_cols=71 Identities=21% Similarity=0.336 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHhhhHhcccccCCCCccchhhhhhhHHHHHHHHHHHHHhhC-CCCCCChhH--HHHHHHHHHH
Q psy10187 4 LAALCYIVHYTKRVLETLFVHRFSHATMPIMNLFKNCGYYWGFTAYVAYHVNH-PLFSPPNFV--QVFVGLAAFA 75 (78)
Q Consensus 4 ~~~~~~~lHf~KR~lEtlFVHrfS~~tmP~~n~fkn~~yYw~~~~~~~y~i~~-p~~t~p~~~--~~~~gl~lf~ 75 (78)
+...+..+||.+|.+|.-|.||.|+ -||..-+-.--++=-+.+...+++.-| ..+++|... -..+|.++|+
T Consensus 84 ~L~~~flvHYf~R~liypf~~~~~~-~~p~~i~a~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~r~liG~~lfv 157 (257)
T KOG1638|consen 84 LLLSAFLVHYFHRALIYPFLIRSSN-PSPAIIVALAIAFCTLNGTLQGLYLSHYQLYEDPWVTDIRFLIGVVLFV 157 (257)
T ss_pred HHHHHHHHHHHHHHHhheeeecCCC-CccHHHHHHHHHHHHhhHHHHHHHHHhcccccCCCchhHHHHHHHHHHH
Confidence 4567889999999999999999995 555544432222211223345555433 566666654 6778988886
No 5
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1.3.99.5 from EC catalyse the conversion of 3-oxo-5-alpha-steroid + acceptor to 3-oxo-delta(4)-steroid + reduced acceptor. The steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during foetal development []. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related steroid reductase enzyme, DET2, is found in plants such as Arabidopsis. Mutations in this enzyme cause defects in light-regulated development []. This domain is present in both type 1 and type 2 forms.; GO: 0016627 oxidoreductase activity, acting on the CH-CH group of donors, 0006629 lipid metabolic process, 0005737 cytoplasm, 0016021 integral to membrane
Probab=97.12 E-value=0.0014 Score=44.66 Aligned_cols=46 Identities=30% Similarity=0.569 Sum_probs=30.5
Q ss_pred CCccchhhhhhhHHHHHHHH-HHHHHh-hCCCC-CCC-hhHHHHHHHHHHH
Q psy10187 29 ATMPIMNLFKNCGYYWGFTA-YVAYHV-NHPLF-SPP-NFVQVFVGLAAFA 75 (78)
Q Consensus 29 ~tmP~~n~fkn~~yYw~~~~-~~~y~i-~~p~~-t~p-~~~~~~~gl~lf~ 75 (78)
+|||++++++||+ ||++.+ +++... +.+.+ ... ...+.++|+++|+
T Consensus 1 ~~mpi~~~~~~~~-f~~~ng~l~~~~~~~~~~~~~~~~~~~~~~~g~~lf~ 50 (150)
T PF02544_consen 1 NTMPISNVFMNCF-FWVLNGYLIGYYLSYYAPYQYTWLPSPRFIIGLALFL 50 (150)
T ss_pred CCccHHHHHHHHH-HHHHHHHHHHHHHhcCCcccccchhhHHHHHHHHHHH
Confidence 4899999999999 677665 456444 33332 222 2256778888775
No 6
>PLN02392 probable steroid reductase DET2
Probab=93.89 E-value=0.49 Score=35.71 Aligned_cols=73 Identities=19% Similarity=0.178 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHhhhHhcccccCC-----CCccchhhhhhhHHHHHHHHHHHHHh--hCCCCCCCh--hHHHHHHHHH
Q psy10187 3 SLAALCYIVHYTKRVLETLFVHRFSH-----ATMPIMNLFKNCGYYWGFTAYVAYHV--NHPLFSPPN--FVQVFVGLAA 73 (78)
Q Consensus 3 ~~~~~~~~lHf~KR~lEtlFVHrfS~-----~tmP~~n~fkn~~yYw~~~~~~~y~i--~~p~~t~p~--~~~~~~gl~l 73 (78)
.+.++++.+||+.|.+-.=+.-|-|. +.||+.-..--..+=+..+...+.++ +.|+|+... ..+.++|+++
T Consensus 79 ~vl~~lf~~HY~~Ra~i~Pl~~~~~~~~~~~~p~p~~i~~~a~~F~~~Ng~lq~~wl~~~~~~y~~~~~~~~~~~iG~~l 158 (260)
T PLN02392 79 LLLMSPYLLHYFHRTCIYPLRLYRSTSQQNTKGFPVSMALLAFGFNLLNAYLQARWVSHYKDDYEDGGWFWWRFFGGLVV 158 (260)
T ss_pred HHHHHHHHHHHHhHHHhhhhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCcccccHHHHHHHHH
Confidence 46678899999999988887766552 14666544322222222222333333 235665432 2467788888
Q ss_pred HH
Q psy10187 74 FA 75 (78)
Q Consensus 74 f~ 75 (78)
|+
T Consensus 159 F~ 160 (260)
T PLN02392 159 FL 160 (260)
T ss_pred HH
Confidence 76
No 7
>KOG1640|consensus
Probab=89.75 E-value=2.4 Score=32.99 Aligned_cols=68 Identities=31% Similarity=0.371 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhhhHhcccccC-CCCccchhhhhhhHHHHHHHH-HHHHHhhCCCCCCC-hh-----HHHHHHHHHHH
Q psy10187 5 AALCYIVHYTKRVLETLFVHRFS-HATMPIMNLFKNCGYYWGFTA-YVAYHVNHPLFSPP-NF-----VQVFVGLAAFA 75 (78)
Q Consensus 5 ~~~~~~lHf~KR~lEtlFVHrfS-~~tmP~~n~fkn~~yYw~~~~-~~~y~i~~p~~t~p-~~-----~~~~~gl~lf~ 75 (78)
......+|=.+|++||+||-.|| ++.|-+. -+=.=||..++ .++--....++..+ .. .+=++|+++|.
T Consensus 127 ~~l~~s~~~~rrlYet~fv~~~~~~s~mnl~---hy~vg~V~y~vl~~~l~~~~~g~~~~~~~~~l~~i~q~~g~~iF~ 202 (304)
T KOG1640|consen 127 LLLIYSLHTLRRLYETLFVLVYSVNSKMNLG---HYLVGYVFYTVLSLALLLCTNGSSEGPNFNSLSSILQWLGLGIFA 202 (304)
T ss_pred HHHHHHHHHHHHHHHHHHheeeeeccccchh---hHHHHHHHHHHHHHHHHHhhcccccCchhhhHHHHHHHHHHHHHH
Confidence 34567899999999999999999 5566332 22222333322 23333344444333 22 25567888775
No 8
>PF12828 PXB: PX-associated; InterPro: IPR024555 The function of this domain is not known, but it is almost always found N-terminal to a PX domain (IPR001683 from INTERPRO).
Probab=23.99 E-value=40 Score=23.09 Aligned_cols=10 Identities=40% Similarity=0.494 Sum_probs=8.0
Q ss_pred HHHHHHHHhh
Q psy10187 9 YIVHYTKRVL 18 (78)
Q Consensus 9 ~~lHf~KR~l 18 (78)
...||+||+|
T Consensus 12 ~q~HyLkk~L 21 (137)
T PF12828_consen 12 TQEHYLKKEL 21 (137)
T ss_pred HHHHHHHHHH
Confidence 4579999986
No 9
>PF07603 DUF1566: Protein of unknown function (DUF1566); InterPro: IPR011460 These proteins of unknown function are found in Leptospira interrogans and in several gamma proteobacteria.
Probab=20.61 E-value=21 Score=22.41 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=21.4
Q ss_pred HHhhhHhcccccCCCCccchhhhhh--hHHHHHHH
Q psy10187 15 KRVLETLFVHRFSHATMPIMNLFKN--CGYYWGFT 47 (78)
Q Consensus 15 KR~lEtlFVHrfS~~tmP~~n~fkn--~~yYw~~~ 47 (78)
++||++|.-.+-..+.+.-...|.| ...||..+
T Consensus 56 ~~EL~~L~~~~~~~p~~~~~~~F~~~~~~~yWSst 90 (124)
T PF07603_consen 56 IEELQSLYDFSCTNPALIDTSFFPNTDSSWYWSST 90 (124)
T ss_pred HHHHHHHHHhccCCCcccccccCCCCCCCCEEcCC
Confidence 6899999766555433333567776 66778765
No 10
>PF10642 Tom5: Mitochondrial import receptor subunit or translocase; InterPro: IPR019603 This entry represents a short family of yeast proteins. Tom5 is one of three very small translocases of the mitochondrial outer membrane. Tom5 links mitochondrial preprotein receptors to the general import pore []. Although Tom5 has allegedly been identified in vertebrates this could not be confirmed.
Probab=18.76 E-value=65 Score=18.67 Aligned_cols=10 Identities=20% Similarity=0.710 Sum_probs=7.7
Q ss_pred HHHHHHHHhh
Q psy10187 9 YIVHYTKRVL 18 (78)
Q Consensus 9 ~~lHf~KR~l 18 (78)
..+||+||.+
T Consensus 40 ~~~~~vkk~~ 49 (49)
T PF10642_consen 40 FAIDFVKKQL 49 (49)
T ss_pred HHHHHHHhcC
Confidence 4689999964
Done!