Query psy10189
Match_columns 376
No_of_seqs 315 out of 2572
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 20:07:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10189.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10189hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4226|consensus 100.0 3.7E-44 8E-49 298.8 18.6 256 1-331 108-378 (379)
2 KOG1264|consensus 100.0 4.6E-35 9.9E-40 276.3 15.8 224 57-360 533-801 (1267)
3 KOG3601|consensus 100.0 8.7E-35 1.9E-39 235.3 4.2 210 1-210 1-219 (222)
4 KOG4278|consensus 100.0 7.6E-33 1.6E-37 257.1 13.9 193 155-373 91-286 (1157)
5 KOG0790|consensus 100.0 6.6E-28 1.4E-32 214.9 15.3 200 57-331 3-216 (600)
6 KOG2996|consensus 100.0 2.7E-28 5.9E-33 223.4 11.0 194 16-210 626-863 (865)
7 KOG0197|consensus 99.9 6.5E-28 1.4E-32 222.5 8.2 196 155-374 12-226 (468)
8 KOG2996|consensus 99.9 4.1E-27 8.8E-32 215.7 11.3 184 169-364 625-838 (865)
9 KOG4226|consensus 99.9 1.7E-26 3.8E-31 193.2 10.4 139 2-141 193-364 (379)
10 KOG4637|consensus 99.9 1.2E-26 2.5E-31 202.0 9.2 96 234-330 329-428 (464)
11 KOG1029|consensus 99.9 7.6E-26 1.6E-30 213.1 9.7 168 1-208 694-866 (1118)
12 KOG3601|consensus 99.9 4.8E-26 1E-30 184.7 2.8 179 157-360 3-190 (222)
13 KOG4278|consensus 99.9 2.8E-24 6E-29 200.4 12.6 139 3-141 93-236 (1157)
14 KOG4792|consensus 99.9 6.2E-23 1.3E-27 167.5 9.5 157 55-211 8-182 (293)
15 KOG4225|consensus 99.9 4.9E-22 1.1E-26 177.3 8.6 131 2-212 232-364 (489)
16 cd00173 SH2 Src homology 2 dom 99.9 8.1E-21 1.8E-25 142.6 11.8 93 238-330 1-94 (94)
17 KOG4792|consensus 99.9 2.8E-21 6.1E-26 157.9 9.8 123 234-359 8-150 (293)
18 smart00252 SH2 Src homology 2 99.9 7E-21 1.5E-25 139.6 10.9 82 237-318 1-83 (84)
19 KOG4348|consensus 99.8 3.8E-22 8.3E-27 177.4 1.7 154 2-212 3-158 (627)
20 KOG4348|consensus 99.8 1.2E-21 2.5E-26 174.3 4.1 198 2-210 102-319 (627)
21 KOG1264|consensus 99.8 2.7E-20 5.9E-25 177.0 11.2 150 57-211 647-832 (1267)
22 PF00017 SH2: SH2 domain; Int 99.8 3.4E-20 7.3E-25 133.5 8.4 75 239-313 1-77 (77)
23 KOG1029|consensus 99.8 1.5E-20 3.3E-25 177.7 7.6 222 2-232 815-1105(1118)
24 KOG0197|consensus 99.8 3.9E-19 8.5E-24 164.6 10.6 139 2-141 13-175 (468)
25 KOG0194|consensus 99.7 1.8E-16 3.9E-21 149.0 11.8 124 234-374 46-177 (474)
26 KOG4637|consensus 99.7 3.9E-17 8.4E-22 143.0 5.8 99 234-332 20-121 (464)
27 KOG4225|consensus 99.7 1.5E-16 3.2E-21 142.6 6.9 175 2-208 306-488 (489)
28 PF14604 SH3_9: Variant SH3 do 99.6 2.5E-16 5.5E-21 101.6 3.8 49 5-54 1-49 (49)
29 smart00252 SH2 Src homology 2 99.6 5.2E-15 1.1E-19 108.3 9.9 81 58-138 1-82 (84)
30 PF00017 SH2: SH2 domain; Int 99.6 6.7E-15 1.5E-19 105.8 8.1 75 60-134 1-77 (77)
31 cd00173 SH2 Src homology 2 dom 99.6 2.2E-14 4.7E-19 107.5 10.6 81 59-139 1-82 (94)
32 PF14604 SH3_9: Variant SH3 do 99.4 1.2E-13 2.7E-18 89.0 4.9 49 159-207 1-49 (49)
33 PF07653 SH3_2: Variant SH3 do 99.4 6.5E-14 1.4E-18 93.2 3.7 53 2-55 1-54 (55)
34 PF00018 SH3_1: SH3 domain; I 99.4 4E-13 8.8E-18 86.7 3.9 46 4-50 1-48 (48)
35 KOG3632|consensus 99.3 1.8E-12 4E-17 126.5 7.2 153 2-210 1140-1308(1335)
36 KOG0790|consensus 99.3 7.9E-12 1.7E-16 112.8 6.6 95 49-144 101-206 (600)
37 KOG2199|consensus 99.2 2.6E-12 5.6E-17 114.3 1.6 52 2-54 217-268 (462)
38 PF07653 SH3_2: Variant SH3 do 99.2 1.3E-11 2.8E-16 82.1 4.1 53 157-209 2-55 (55)
39 smart00326 SH3 Src homology 3 99.2 3.2E-11 7E-16 81.3 5.0 53 2-55 4-57 (58)
40 KOG2070|consensus 99.2 1.2E-11 2.5E-16 112.9 3.5 54 2-56 19-72 (661)
41 cd00174 SH3 Src homology 3 dom 99.2 5.3E-11 1.1E-15 79.0 5.1 52 2-54 1-53 (54)
42 KOG2199|consensus 99.1 1.8E-11 4E-16 108.9 3.0 57 153-209 214-270 (462)
43 KOG1930|consensus 99.1 6.9E-11 1.5E-15 105.9 5.5 97 231-329 206-320 (483)
44 KOG1118|consensus 99.1 2.7E-11 5.9E-16 104.2 2.4 54 2-56 308-361 (366)
45 PF00018 SH3_1: SH3 domain; I 99.1 9.4E-11 2E-15 75.5 4.3 46 158-203 1-48 (48)
46 KOG2070|consensus 99.0 1.7E-10 3.8E-15 105.3 2.5 55 155-209 18-72 (661)
47 KOG0515|consensus 98.9 4.1E-10 8.9E-15 103.9 3.2 56 2-57 685-742 (752)
48 KOG1118|consensus 98.9 8.6E-10 1.9E-14 95.1 2.0 56 154-209 306-361 (366)
49 cd00174 SH3 Src homology 3 dom 98.8 4.2E-09 9.1E-14 69.7 4.3 52 157-208 2-54 (54)
50 smart00326 SH3 Src homology 3 98.8 4.7E-09 1E-13 70.5 3.9 53 156-208 4-57 (58)
51 PF14633 SH2_2: SH2 domain; PD 98.7 1.9E-07 4.1E-12 79.5 12.0 170 54-315 34-218 (220)
52 KOG0162|consensus 98.7 9.7E-09 2.1E-13 98.3 4.2 54 155-208 1052-1105(1106)
53 KOG2546|consensus 98.7 7.2E-09 1.6E-13 93.4 2.2 55 2-57 425-479 (483)
54 KOG3875|consensus 98.5 1.6E-08 3.6E-13 87.5 -1.0 56 3-58 271-332 (362)
55 KOG2856|consensus 98.3 9E-08 1.9E-12 84.8 -0.1 55 155-209 415-471 (472)
56 KOG0515|consensus 98.3 1.8E-07 4E-12 86.8 1.8 55 156-210 685-742 (752)
57 KOG1930|consensus 98.3 7.8E-07 1.7E-11 80.3 5.4 90 52-141 206-313 (483)
58 KOG2546|consensus 98.3 5.8E-07 1.3E-11 81.4 3.7 55 155-209 424-478 (483)
59 KOG0194|consensus 98.2 5.1E-06 1.1E-10 79.0 9.0 95 57-153 48-149 (474)
60 KOG3697|consensus 98.2 2.6E-06 5.7E-11 73.2 5.1 96 234-332 198-343 (345)
61 KOG3875|consensus 98.0 2.2E-06 4.9E-11 74.5 1.7 58 154-211 268-332 (362)
62 KOG3751|consensus 98.0 4.5E-06 9.7E-11 77.8 3.0 85 232-316 514-605 (622)
63 KOG3655|consensus 97.9 3.6E-06 7.8E-11 77.7 1.8 55 155-209 428-483 (484)
64 KOG1702|consensus 97.9 9.9E-06 2.1E-10 66.2 3.5 55 154-208 207-263 (264)
65 KOG2528|consensus 97.8 1.1E-05 2.4E-10 73.7 2.6 79 2-89 4-83 (490)
66 KOG3523|consensus 97.8 5E-06 1.1E-10 78.8 -0.5 55 2-57 610-666 (695)
67 KOG1843|consensus 97.7 1.3E-05 2.9E-10 72.4 2.1 54 155-208 417-472 (473)
68 PF14633 SH2_2: SH2 domain; PD 97.7 0.0002 4.2E-09 61.3 8.8 79 236-315 37-123 (220)
69 KOG1856|consensus 97.7 0.00038 8.1E-09 71.1 11.8 164 64-318 1113-1289(1299)
70 KOG3557|consensus 97.7 1.1E-05 2.3E-10 77.1 0.9 54 2-57 502-556 (721)
71 KOG2222|consensus 97.7 7.8E-06 1.7E-10 75.3 -0.6 55 3-58 551-605 (848)
72 KOG3771|consensus 97.4 8.1E-05 1.8E-09 69.1 2.4 54 2-55 402-455 (460)
73 KOG3632|consensus 97.4 7.8E-05 1.7E-09 74.5 2.3 54 3-56 1247-1307(1335)
74 KOG4773|consensus 97.3 5.3E-05 1.1E-09 67.3 0.3 58 155-212 176-233 (386)
75 KOG4773|consensus 97.3 2.6E-05 5.6E-10 69.2 -2.3 53 3-56 178-230 (386)
76 KOG0609|consensus 97.2 0.00011 2.5E-09 69.2 1.4 52 2-54 216-279 (542)
77 KOG4575|consensus 97.2 0.00035 7.6E-09 66.8 4.1 52 2-54 10-63 (874)
78 KOG2222|consensus 97.1 0.00019 4.1E-09 66.4 1.4 56 155-210 549-604 (848)
79 KOG3523|consensus 97.0 0.00012 2.6E-09 69.7 -0.5 57 156-212 610-668 (695)
80 KOG3751|consensus 96.7 0.0012 2.7E-08 62.0 2.9 81 57-137 518-605 (622)
81 KOG3557|consensus 96.5 0.00071 1.5E-08 65.1 0.2 57 155-212 501-558 (721)
82 KOG4429|consensus 96.4 0.0025 5.5E-08 55.4 3.2 55 155-209 364-418 (421)
83 PF08239 SH3_3: Bacterial SH3 96.4 0.0033 7.1E-08 41.3 2.9 37 18-54 18-55 (55)
84 KOG4566|consensus 96.3 0.0063 1.4E-07 53.2 5.1 83 234-317 49-139 (258)
85 KOG0609|consensus 96.2 0.0083 1.8E-07 57.0 5.7 54 155-208 215-280 (542)
86 KOG3565|consensus 96.2 0.0014 3.1E-08 65.0 0.6 55 2-56 580-636 (640)
87 KOG3775|consensus 96.1 0.0052 1.1E-07 55.4 3.3 61 154-214 262-324 (482)
88 KOG1451|consensus 95.9 0.0062 1.3E-07 58.2 3.2 55 155-209 757-812 (812)
89 KOG2528|consensus 95.9 0.0045 9.8E-08 57.2 2.0 55 156-210 4-60 (490)
90 KOG3771|consensus 95.8 0.0062 1.3E-07 56.9 2.5 53 154-206 400-453 (460)
91 KOG4575|consensus 95.8 0.0068 1.5E-07 58.3 2.8 55 155-209 9-65 (874)
92 KOG3508|consensus 95.6 0.00057 1.2E-08 69.0 -5.1 240 56-332 79-325 (932)
93 KOG3697|consensus 95.4 0.026 5.7E-07 49.2 4.8 82 56-140 199-327 (345)
94 KOG3725|consensus 95.1 0.0063 1.4E-07 52.0 0.3 54 155-208 318-373 (375)
95 PF14603 hSH3: Helically-exten 95.1 0.021 4.6E-07 40.5 2.8 42 13-55 29-71 (89)
96 PRK10884 SH3 domain-containing 95.1 0.02 4.3E-07 48.8 3.1 38 18-55 49-87 (206)
97 smart00287 SH3b Bacterial SH3 94.6 0.046 9.9E-07 36.9 3.3 36 18-54 26-62 (63)
98 KOG3775|consensus 94.5 0.022 4.7E-07 51.5 2.0 50 4-54 266-317 (482)
99 KOG0199|consensus 94.3 0.045 9.7E-07 54.2 3.9 52 3-54 377-430 (1039)
100 PF14603 hSH3: Helically-exten 93.6 0.098 2.1E-06 37.2 3.5 45 167-211 29-74 (89)
101 KOG1856|consensus 93.3 0.14 2.9E-06 53.3 5.2 80 236-316 1107-1194(1299)
102 KOG0040|consensus 93.0 0.0056 1.2E-07 64.3 -4.9 58 154-211 968-1025(2399)
103 PF06347 SH3_4: Bacterial SH3 92.1 0.18 3.9E-06 33.0 3.0 35 17-53 19-53 (55)
104 PF08239 SH3_3: Bacterial SH3 91.8 0.28 6.1E-06 31.9 3.7 37 171-207 17-55 (55)
105 KOG0040|consensus 90.3 0.013 2.7E-07 61.8 -5.7 54 3-57 971-1024(2399)
106 KOG0199|consensus 90.1 0.29 6.2E-06 48.8 3.4 48 160-207 380-430 (1039)
107 COG3103 SH3 domain protein [Si 89.5 0.35 7.5E-06 41.0 3.1 38 18-55 49-87 (205)
108 KOG3565|consensus 89.4 0.14 3E-06 51.2 0.8 58 152-209 576-636 (640)
109 smart00287 SH3b Bacterial SH3 88.7 0.75 1.6E-05 30.7 3.9 36 171-206 25-61 (63)
110 KOG4566|consensus 87.8 0.92 2E-05 39.9 4.7 80 56-136 50-137 (258)
111 KOG3812|consensus 87.2 0.41 8.8E-06 43.1 2.1 48 3-51 61-118 (475)
112 PF02762 Cbl_N3: CBL proto-onc 86.8 4.1 8.8E-05 28.3 6.3 43 238-280 3-47 (86)
113 KOG0162|consensus 86.3 0.53 1.2E-05 46.8 2.6 27 334-360 1052-1078(1106)
114 KOG3705|consensus 86.3 0.83 1.8E-05 42.2 3.7 52 2-54 511-564 (580)
115 KOG2856|consensus 86.1 0.4 8.6E-06 43.6 1.5 28 334-361 415-442 (472)
116 PRK10884 SH3 domain-containing 84.4 1.2 2.6E-05 38.0 3.6 41 171-211 48-90 (206)
117 PRK13914 invasion associated s 83.4 1.1 2.4E-05 43.1 3.3 36 18-54 104-140 (481)
118 KOG3705|consensus 82.2 0.82 1.8E-05 42.2 1.8 54 155-208 510-565 (580)
119 PF12913 SH3_6: SH3 domain of 82.0 2.1 4.5E-05 27.8 3.1 34 17-50 21-54 (54)
120 PF06347 SH3_4: Bacterial SH3 79.8 3.2 6.9E-05 26.9 3.6 35 171-206 19-53 (55)
121 KOG3812|consensus 79.7 0.78 1.7E-05 41.3 0.8 38 167-204 78-118 (475)
122 smart00743 Agenet Tudor-like d 70.7 4.4 9.6E-05 26.9 2.5 23 18-41 2-24 (61)
123 KOG3667|consensus 69.5 8 0.00017 38.6 4.9 61 236-296 562-623 (682)
124 KOG1094|consensus 62.7 3 6.4E-05 41.1 0.5 31 344-374 527-558 (807)
125 PF07935 SSV1_ORF_D-335: ORF D 62.5 35 0.00077 23.4 5.5 44 258-316 5-48 (72)
126 COG3103 SH3 domain protein [Si 56.7 16 0.00034 31.2 3.8 40 171-210 48-89 (205)
127 KOG1843|consensus 56.7 8 0.00017 36.1 2.2 27 334-360 417-443 (473)
128 PRK13914 invasion associated s 54.9 15 0.00033 35.5 3.9 39 171-209 103-142 (481)
129 KOG1702|consensus 51.6 8.6 0.00019 32.2 1.4 27 334-360 208-234 (264)
130 PF11302 DUF3104: Protein of u 48.5 19 0.00041 25.1 2.5 25 16-40 3-32 (75)
131 smart00557 IG_FLMN Filamin-typ 46.7 27 0.00058 25.4 3.3 29 253-281 50-78 (93)
132 PF02762 Cbl_N3: CBL proto-onc 43.3 1.1E+02 0.0025 21.4 6.5 44 59-102 3-48 (86)
133 KOG4257|consensus 41.1 13 0.00028 37.2 1.0 27 347-373 381-408 (974)
134 KOG1785|consensus 39.1 49 0.0011 30.9 4.3 48 236-283 255-305 (563)
135 KOG4384|consensus 35.6 24 0.00052 32.4 1.8 53 5-58 141-195 (361)
136 KOG0605|consensus 33.9 15 0.00033 35.7 0.4 16 357-372 144-159 (550)
137 KOG3508|consensus 30.9 63 0.0014 34.0 4.1 84 12-96 175-269 (932)
138 COG3807 Uncharacterized protei 30.7 1.1E+02 0.0025 24.5 4.6 35 18-54 60-95 (171)
139 KOG2052|consensus 29.7 36 0.00078 32.6 2.0 21 353-373 210-230 (513)
140 PF00630 Filamin: Filamin/ABP2 29.5 56 0.0012 23.8 2.7 27 255-281 66-92 (101)
141 PF05641 Agenet: Agenet domain 28.2 53 0.0011 22.3 2.2 22 19-40 1-24 (68)
142 PRK13545 tagH teichoic acids e 26.8 51 0.0011 32.7 2.6 37 21-57 374-415 (549)
143 KOG3580|consensus 26.3 97 0.0021 30.8 4.2 49 4-52 508-564 (1027)
144 KOG4384|consensus 25.9 63 0.0014 29.8 2.7 56 156-211 138-195 (361)
145 KOG3667|consensus 23.0 1.2E+02 0.0026 30.7 4.3 57 54-110 559-616 (682)
146 KOG1026|consensus 22.2 36 0.00077 35.1 0.6 30 346-375 477-507 (774)
147 KOG3725|consensus 21.9 40 0.00088 29.4 0.8 26 335-360 319-344 (375)
No 1
>KOG4226|consensus
Probab=100.00 E-value=3.7e-44 Score=298.80 Aligned_cols=256 Identities=33% Similarity=0.576 Sum_probs=198.8
Q ss_pred CEEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCCc
Q psy10189 1 MEAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEG 80 (376)
Q Consensus 1 ~~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G 80 (376)
|.+++.|.|+|+.++||++-+|+.|.|+++ ..+|||.|..+|+.||||+||+...... .....+
T Consensus 108 t~AvVKf~Y~a~~eDELsLtKGtrv~vmEK-ssDGWWrG~~ng~VGWFPSNYv~E~~ds---------------~~gd~~ 171 (379)
T KOG4226|consen 108 TPAVVKFNYVAEREDELSLTKGTRVTVMEK-SSDGWWRGSYNGQVGWFPSNYVTEEVDS---------------AAGDSP 171 (379)
T ss_pred CceEEEEeeccccccccccccCcEEEEEEe-ccCcceecccCCeeccccccceehhccc---------------cccCCc
Confidence 358899999999999999999999999998 6679999999999999999999743321 001223
Q ss_pred cEEEeecC----CCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccccccccccCCCchhhh
Q psy10189 81 AFLIRVSE----SSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMVPEECL 156 (376)
Q Consensus 81 ~flvR~s~----~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (376)
+|+-+... +.++.++| ..
T Consensus 172 s~~~~~~~A~a~n~~~s~vl----------------------------------------------------------~v 193 (379)
T KOG4226|consen 172 SFLSLRKAASASNGQGSRVL----------------------------------------------------------HV 193 (379)
T ss_pred cceecchhhcccCCCCceEE----------------------------------------------------------EE
Confidence 33322110 00010110 24
Q ss_pred hhhcccCCCCCCCceeccCCCEEEEEec--CCCcceeeee-CCeeeeeecccccccccCcchhhhc----cCCCCCCccc
Q psy10189 157 VQALYDFTPQEPGELEFRRGDVITVTDR--SDQHWWHGEI-GARKGLFPATYILNMEDDMNWYRAE----LDGKEGLIPS 229 (376)
Q Consensus 157 ~~al~~~~~~~~~eL~~~~g~~i~v~~~--~~~~w~~~~~-~~~~G~~P~~~v~~~~~~~~~~~~~----~~~~~g~~p~ 229 (376)
+.|||.|.+..+.||+|.+|+.+.|+++ .+++||.++. +|++|+||.|||..+..++.--.+. .....|.-|+
T Consensus 194 VvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~ts~~~~~s~~pq~sgn~p~ 273 (379)
T KOG4226|consen 194 VVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDGPSTSKALHPSHAPQISGNGPS 273 (379)
T ss_pred EEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccCccccccCCccccccccCCCCC
Confidence 6799999999999999999999999987 5778999995 8999999999999876543221111 1123444455
Q ss_pred cccccccccccccccChHHHHHhhc-CCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeccccCCHHH
Q psy10189 230 NYIEMKNHDWYYGRITRADAERLLS-NKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNE 308 (376)
Q Consensus 230 ~~~~~~~~~w~~g~i~r~~ae~~L~-~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~ 308 (376)
....+...|||+|.|+|.+||..|. ...+|.||||+|++++|+|++|++..++-+||++.. .++-|.|+.+.|-++.+
T Consensus 274 ~sg~~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~-~d~~ycIGqRkF~tmd~ 352 (379)
T KOG4226|consen 274 SSGRFAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQL-VDNVYCIGQRKFHTMDE 352 (379)
T ss_pred ccccccCCcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEE-ecceEEeccceeccHHH
Confidence 4445788999999999999999996 467899999999999999999999999999999965 56889999999999999
Q ss_pred HHHHHhhCCcCCcc---eeeeCCCCC
Q psy10189 309 LVEYHRTASVSRSQ---DVKLRDMVP 331 (376)
Q Consensus 309 lv~~y~~~~~~~~~---~~~L~~p~~ 331 (376)
||+||++.++..+. .+-|..++|
T Consensus 353 Lv~HY~kaPIfts~qgEKLyLvr~Lp 378 (379)
T KOG4226|consen 353 LVEHYKKAPIFTSEQGEKLYLVRALP 378 (379)
T ss_pred HHHhhhcCCceecCCCceEEEeccCC
Confidence 99999999887653 333444443
No 2
>KOG1264|consensus
Probab=100.00 E-value=4.6e-35 Score=276.26 Aligned_cols=224 Identities=33% Similarity=0.555 Sum_probs=184.4
Q ss_pred ccccccccCC-HHHHHHHhcC------CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCC---CcEEEecee-ec
Q psy10189 57 NHDWYYGRIT-RADAERLLSN------KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSS---GKFFLWVVK-FN 125 (376)
Q Consensus 57 ~~~w~~g~is-r~~ae~~l~~------~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~---~~~~~~~~~-f~ 125 (376)
.+.||||++- |.+|+.+|.. .++|+||||+|.+-.|+|+||+..+++|+|++|..... -+|++.+.. |+
T Consensus 533 ~E~WFHgkle~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfd 612 (1267)
T KOG1264|consen 533 GEKWFHGKLEGRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFD 612 (1267)
T ss_pred chhhhhcccccchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHH
Confidence 4679999998 9999999976 56999999999999999999999999999999986433 367777665 99
Q ss_pred chhhhHhhhhcccccccccccccCCCchhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccc
Q psy10189 126 SLNELVEYHRTASVSRSQDVKLRDMVPEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATY 205 (376)
Q Consensus 126 sl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~ 205 (376)
||-+||.||+...+.-. |..+ .+.
T Consensus 613 slY~LI~~Y~~~~Lr~a---------------------------eF~m------~Lt----------------------- 636 (1267)
T KOG1264|consen 613 SLYALIQHYRETHLRCA---------------------------EFEM------RLT----------------------- 636 (1267)
T ss_pred HHHHHHHHHHhcccccc---------------------------ceEE------Eec-----------------------
Confidence 99999999998764310 1111 111
Q ss_pred ccccccCcchhhhccCCCCCCccccccccccccccccccChHHHHHhhcC-CCCCceEEeecCCCCCceEEEEEeCCeeE
Q psy10189 206 ILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQ 284 (376)
Q Consensus 206 v~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~r~~ae~~L~~-~~~G~flvR~s~~~~~~~~ls~~~~~~v~ 284 (376)
.|++.+ .+++++||||.+.+|++||.+|.. ..||+|||| +...++.|+||++.+++|+
T Consensus 637 -ePvPqp-------------------~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR-~~~~~nsy~iSfr~~gkik 695 (1267)
T KOG1264|consen 637 -EPVPQP-------------------NPHESKPWYHASLTREQAEDMLMRVPRDGAFLIR-KREGSNSYAISFRARGKIK 695 (1267)
T ss_pred -CCCCCC-------------------CcccCCccccccccHHHHHHHHhhCccCcceEEE-eccCCceEEEEEEEcCcEe
Confidence 111111 127889999999999999999986 567999999 4467788999999999999
Q ss_pred EEEEEEcCCCcEEEeccccCCHHHHHHHHhhCCcCCcceeeeCCCCCcc-------------------------------
Q psy10189 285 HFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMVPEE------------------------------- 333 (376)
Q Consensus 285 h~~I~~~~~~~~~~~~~~f~sl~~lv~~y~~~~~~~~~~~~L~~p~~~~------------------------------- 333 (376)
||+|.++ +..|.++...|.||.+||+||.++++.+ .++|++||.+.
T Consensus 696 HcRi~rd-Gr~fvl~t~~FesLv~lv~yY~k~~lyR--~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~ 772 (1267)
T KOG1264|consen 696 HCRINRD-GRHFVLGTSAFESLVELVSYYEKHPLYR--KMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSM 772 (1267)
T ss_pred EEEEccC-ceEEEeccHHHHHHHHHHHHHhcChhhh--cccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccc
Confidence 9999864 3467777888999999999999999998 88888887532
Q ss_pred --ceEEEeccCCCCCCCCccccccceeee
Q psy10189 334 --CLVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 334 --~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
+.++|||+|.+.+++||+|+++.||.-
T Consensus 773 ~~vt~kAL~~Yka~r~DELSFpk~aiItn 801 (1267)
T KOG1264|consen 773 PQVTVKALYDYKAKRSDELSFPKGAIITN 801 (1267)
T ss_pred cchhhhhhhccccCCcccccccccceeEe
Confidence 668899999999999999999999976
No 3
>KOG3601|consensus
Probab=100.00 E-value=8.7e-35 Score=235.29 Aligned_cols=210 Identities=62% Similarity=0.995 Sum_probs=196.9
Q ss_pred CEEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCCc
Q psy10189 1 MEAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEG 80 (376)
Q Consensus 1 ~~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G 80 (376)
|+++|+++|.+...+||+|.+||.|.+++..++-+|..+..+|.+|++|.||+++...+||++.++|..|+.++....+|
T Consensus 1 Mea~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael~g~~g~~P~Nai~~~~~~wve~~i~r~~ae~~l~~~~~G 80 (222)
T KOG3601|consen 1 MEAVAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAELDGPEGFIPKNAIRMKPHEWVEGLIPRPLAEDLLSKKRDG 80 (222)
T ss_pred CchhhhhhhhhcCcccceeecCCceEecchHHhhhhhhHhhcCccccCcccccccccccceecccccchhhhhhhccCcc
Confidence 78999999999999999999999999999867778999999999999999999999999999999999999999999999
Q ss_pred cEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccccccccccCCC---------
Q psy10189 81 AFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMV--------- 151 (376)
Q Consensus 81 ~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~~~~--------- 151 (376)
.|++|.+.++++.|++|++....|+|+++.+...++|+.+...|+++.++++|++++...+.....++...
T Consensus 81 ~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~~ 160 (222)
T KOG3601|consen 81 DFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPPA 160 (222)
T ss_pred hhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeeeecccccccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998887766555433
Q ss_pred chhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccc
Q psy10189 152 PEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 152 ~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
+......++|+|+++.+.+|.+++|+.+.|++..+..||.|+..|+.|+||++|+.+.+
T Consensus 161 ~~~~yqQa~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~lg~agiFpagyv~p~d 219 (222)
T KOG3601|consen 161 PTNYYQQALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSKLGRAGIFPAGYVAPSD 219 (222)
T ss_pred ccchhhhhcCCCCCCCchhhccccCCcceeecCCCcchhhccccCceeeecCccccccc
Confidence 34567889999999999999999999999999999999999999999999999998864
No 4
>KOG4278|consensus
Probab=100.00 E-value=7.6e-33 Score=257.08 Aligned_cols=193 Identities=28% Similarity=0.513 Sum_probs=173.1
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecC-CCcceeeeeCCeeeeeecccccccccCcchhhhccCCCCCCccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRS-DQHWWHGEIGARKGLFPATYILNMEDDMNWYRAELDGKEGLIPSNYIE 233 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~-~~~w~~~~~~~~~G~~P~~~v~~~~~~~~~~~~~~~~~~g~~p~~~~~ 233 (376)
....|||||.+..+..|++.+|+.+.|+... ++.|-.++..+..||||+||+.|+.+
T Consensus 91 NLFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGqGWVPSNyItPvNS---------------------- 148 (1157)
T KOG4278|consen 91 NLFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQGWVPSNYITPVNS---------------------- 148 (1157)
T ss_pred ceeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCCccccccccccccc----------------------
Confidence 3688999999999999999999999999875 45688887643449999999999877
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-ccccCCHHHHHHH
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-VVKFNSLNELVEY 312 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~-~~~f~sl~~lv~~ 312 (376)
++...||||.++|..||.+|....+|+||||+|++.+|.|++|+++.|+|+||+|..+.+|+.|+. +..|.+|.|||.|
T Consensus 149 LeKhsWYHGpvSRsaaEy~LsSgInGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHH 228 (1157)
T KOG4278|consen 149 LEKHSWYHGPVSRSAAEYILSSGINGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELVHH 228 (1157)
T ss_pred hhhcccccCccccchhhhhhhcCcccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHHhh
Confidence 788999999999999999999999999999999999999999999999999999999999998887 7999999999999
Q ss_pred HhhCCcCCcceeeeCCCCCccceEEEeccCCCCCCCCccccccceeee-ecCCCCCCcccee
Q psy10189 313 HRTASVSRSQDVKLRDMVPEECLVQALYDFTPQEPGELEFRRDLKIKR-RKSAKTKDETTVR 373 (376)
Q Consensus 313 y~~~~~~~~~~~~L~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 373 (376)
|.....++ -++|-+|-|+..-.. +|...|.- ++|++.+.+|+++ |||-||.|||-.|
T Consensus 229 HStvADGL--ittLhYPApK~nKpt-vygvSPn~-DkWEmeRtdItMkhKLGGGQYGeVYeG 286 (1157)
T KOG4278|consen 229 HSTVADGL--ITTLHYPAPKKNKPT-VYGVSPNA-DKWEMERTDITMKHKLGGGQYGEVYEG 286 (1157)
T ss_pred ccccccce--eEeeeccCccCCCCc-eeeecCCc-chhhccchheeeeeccCCCcccceeee
Confidence 99998887 888999998764443 77777766 8999999999999 9999999999654
No 5
>KOG0790|consensus
Probab=99.95 E-value=6.6e-28 Score=214.94 Aligned_cols=200 Identities=36% Similarity=0.563 Sum_probs=166.5
Q ss_pred ccccccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhh
Q psy10189 57 NHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHR 135 (376)
Q Consensus 57 ~~~w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~ 135 (376)
+..|||..++..+|+.+|.. ..+|+||.|.|.+++++|++++..++.+.|++|...++..-...+.+|.++.+|++||+
T Consensus 3 s~~wfh~~~~g~~ae~Ll~~~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyym 82 (600)
T KOG0790|consen 3 SRRWFHPDLSGVEAETLLKERGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYM 82 (600)
T ss_pred chhhcCCCccchhHHHHHHHhccccchhhccccCCCcceeEEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHH
Confidence 45799999999999999998 89999999999999999999999999999999997766644455678999999999998
Q ss_pred cccccccccccccCCCchhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccccCcch
Q psy10189 136 TASVSRSQDVKLRDMVPEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMEDDMNW 215 (376)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~~~~~ 215 (376)
..+ .+|.-+.|++|.+-.. .
T Consensus 83 e~~------------------------------~~lkekng~~ielK~p------------------l------------ 102 (600)
T KOG0790|consen 83 EHH------------------------------GQLKEKNGDVIELKYP------------------L------------ 102 (600)
T ss_pred hhh------------------------------HHHHhcCCCEEEecCC------------------C------------
Confidence 754 2344455666655321 1
Q ss_pred hhhccCCCCCCccccccccccccccccccChHHHHHhhc-CCCCCceEEeecCCCCCceEEEEEeCC---------eeEE
Q psy10189 216 YRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLS-NKHEGAFLIRVSESSPGDFSLSVKCSD---------GVQH 285 (376)
Q Consensus 216 ~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~r~~ae~~L~-~~~~G~flvR~s~~~~~~~~ls~~~~~---------~v~h 285 (376)
+-.++.+..||||+++..+||.+|. ..++|+||||+|.+.+|+|+|||+.++ +|.|
T Consensus 103 --------------~cAdptserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtH 168 (600)
T KOG0790|consen 103 --------------NCADPTSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTH 168 (600)
T ss_pred --------------ccCCchhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEE
Confidence 1112456679999999999999995 568999999999999999999999865 8999
Q ss_pred EEEEEcCCCcEEEe-ccccCCHHHHHHHHhhCCcCCcc--eeeeCCCCC
Q psy10189 286 FKVLRDSSGKFFLW-VVKFNSLNELVEYHRTASVSRSQ--DVKLRDMVP 331 (376)
Q Consensus 286 ~~I~~~~~~~~~~~-~~~f~sl~~lv~~y~~~~~~~~~--~~~L~~p~~ 331 (376)
..|... ++.|-++ +..|+||.+||+||++|++-... -+.|++|+-
T Consensus 169 vmI~~q-~~kydVGgge~F~sltdLidhykknpmvEt~gtvv~LrqP~n 216 (600)
T KOG0790|consen 169 VMIRCQ-EGKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVVYLRQPLN 216 (600)
T ss_pred EEEEec-ccccccCCccccchHHHHHHHhccCchhhhcceeEEeecccc
Confidence 999865 4889998 58999999999999999987653 456888874
No 6
>KOG2996|consensus
Probab=99.95 E-value=2.7e-28 Score=223.40 Aligned_cols=194 Identities=34% Similarity=0.639 Sum_probs=164.5
Q ss_pred CccccCCCEEEEEeccCCccceeecc--CCccceecccccccc---------------ccccccccCCHHHHHHHhcCCC
Q psy10189 16 ELSFRKSQVLKILNMEDDMNWYRAEL--DGKEGLIPSNYIEMK---------------NHDWYYGRITRADAERLLSNKH 78 (376)
Q Consensus 16 eLsf~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~vP~nyve~~---------------~~~w~~g~isr~~ae~~l~~~~ 78 (376)
-|.+.+||+++++..+.+..||+++. .+..||+|++-|++. ..+||.|.|-|.+|+..|.+.+
T Consensus 626 ~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~MERaqaes~Lk~~~ 705 (865)
T KOG2996|consen 626 RLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGEMERAQAESTLKNRP 705 (865)
T ss_pred ceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcchHhhhhhhhHhhcCC
Confidence 57899999999998777788999994 457899999988742 3569999999999999999999
Q ss_pred CccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEecee-ecchhhhHhhhhccccccc---ccccccCCC--c
Q psy10189 79 EGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVK-FNSLNELVEYHRTASVSRS---QDVKLRDMV--P 152 (376)
Q Consensus 79 ~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~-f~sl~~li~~~~~~~~~~~---~~~~~~~~~--~ 152 (376)
+|+||||.+....+.|.+|+++++.|+|++|... +|.+.+.... |+|+.+||+||+.+++... ..+.+..|- |
T Consensus 706 ngT~LVR~r~kea~e~AISikynnevKHikI~~~-dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~LDTtLk~Pyke~ 784 (865)
T KOG2996|consen 706 NGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETN-DGKVHITEDKKFNSLVELVEYYQSHSLKEIFKALDTTLKFPYKEP 784 (865)
T ss_pred CceEEEEecccchhheeEEEEeccccceEEEEec-CCeEEechhhhhhhHHHHHHHHHhccHHHHHHHhhhhhcCCCcCh
Confidence 9999999999999999999999999999999977 8888888775 9999999999998876542 122222221 0
Q ss_pred h-------------------hhhhhhcccCCCCCCCceeccCCCEEEEEec--CCCcceeeeeCCeeeeeecccccccc
Q psy10189 153 E-------------------ECLVQALYDFTPQEPGELEFRRGDVITVTDR--SDQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 153 ~-------------------~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~--~~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
. -..++|-|||.+.+..+|++++||++.++.+ .+.|||.|..+|++||||++||++-+
T Consensus 785 e~sa~~~~~~~~~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevngrvGwFPstYVee~~ 863 (865)
T KOG2996|consen 785 EHSAGQRGNRAGNSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNGRVGWFPSTYVEEDD 863 (865)
T ss_pred hhhhhhccccccccccCcceeeeeeeccccCCCchhhcccccCCEEEEehhccccCceecceecCcccccccccccccC
Confidence 0 1356788999999999999999999999987 45799999999999999999998753
No 7
>KOG0197|consensus
Probab=99.95 E-value=6.5e-28 Score=222.46 Aligned_cols=196 Identities=32% Similarity=0.572 Sum_probs=156.0
Q ss_pred hhhhhcccCCCCCCCceeccCCCE-EEEEecCCCcceeeee--CCeeeeeecccccccccCcchhhhccCCCCCCccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDV-ITVTDRSDQHWWHGEI--GARKGLFPATYILNMEDDMNWYRAELDGKEGLIPSNY 231 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~-i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~~~~~~~~~~~~~~~~~g~~p~~~ 231 (376)
..+.|+|+|.+..+.+|+|.+|+. ..+++..+..||.++. .+..|++|+|||.... |.-+.
T Consensus 12 ~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~--------------~~~~~-- 75 (468)
T KOG0197|consen 12 TIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNR--------------GSPAF-- 75 (468)
T ss_pred ceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccc--------------cCCCc--
Confidence 578999999999999999999999 7888888899999874 6889999999998752 11111
Q ss_pred cccccccccccccChHHHHHhhcC--CCCCceEEeecCCCCCceEEEEEeCC------eeEEEEEEEcCCCcEE--Ee-c
Q psy10189 232 IEMKNHDWYYGRITRADAERLLSN--KHEGAFLIRVSESSPGDFSLSVKCSD------GVQHFKVLRDSSGKFF--LW-V 300 (376)
Q Consensus 232 ~~~~~~~w~~g~i~r~~ae~~L~~--~~~G~flvR~s~~~~~~~~ls~~~~~------~v~h~~I~~~~~~~~~--~~-~ 300 (376)
..+..++||++.|+|.+|++.|.. ++.|+||||+|++.+++|+|||+... .|+||+|.+.++|.++ +. .
T Consensus 76 ~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~ 155 (468)
T KOG0197|consen 76 IKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDER 155 (468)
T ss_pred cccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHH
Confidence 126788999999999999976653 46699999999999999999999865 8999999999888777 77 5
Q ss_pred cccCCHHHHHHHHhhCCcCCcceeeeCCCCCcc---ceEEE-e-ccCCCCCCCCccccccceeeeecCCCCCCccceec
Q psy10189 301 VKFNSLNELVEYHRTASVSRSQDVKLRDMVPEE---CLVQA-L-YDFTPQEPGELEFRRDLKIKRRKSAKTKDETTVRE 374 (376)
Q Consensus 301 ~~f~sl~~lv~~y~~~~~~~~~~~~L~~p~~~~---~~~~~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 374 (376)
..|+++.+||+||++++.+. +..|+.|.... ....+ + ++-|..++++ +...++||+|+||||-++.
T Consensus 156 ~~F~~l~~lv~~~~~~~~gl--~~~l~~p~~~~~~~~p~~~~~~~d~wei~r~~------l~l~~~LG~G~FG~V~~g~ 226 (468)
T KOG0197|consen 156 ELFSSLQQLVNYYSKNADGL--CTRLRDPCSKQGHTKPQTPDLARDPWEIPREE------LKLIRELGSGQFGEVWLGK 226 (468)
T ss_pred HhhhhHHHHHhhhhccCcch--hhcccCchhccCCCCCCCCccccCCeeecHHH------HHHHHHhcCCccceEEEEE
Confidence 89999999999999999988 66777776432 11111 1 3333333333 4556789999999997763
No 8
>KOG2996|consensus
Probab=99.94 E-value=4.1e-27 Score=215.74 Aligned_cols=184 Identities=29% Similarity=0.534 Sum_probs=156.3
Q ss_pred CceeccCCCEEEEEec-CCCcceeeee--CCeeeeeecccccccccCcchhhhccCCCCCCccccccccccccccccccC
Q psy10189 169 GELEFRRGDVITVTDR-SDQHWWHGEI--GARKGLFPATYILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRIT 245 (376)
Q Consensus 169 ~eL~~~~g~~i~v~~~-~~~~w~~~~~--~~~~G~~P~~~v~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~ 245 (376)
.-|.+..||++.++.. ....||.|+. .+..|+||++-|.|.+..+. +..++|.+| ..++||.|.|-
T Consensus 625 P~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr--------~~~~~~~d~---s~~~WyaG~ME 693 (865)
T KOG2996|consen 625 PRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPR--------QQDYVPTDY---SEFPWYAGEME 693 (865)
T ss_pred CceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCC--------CCCCCccch---hhhhhhcchHh
Confidence 4588999999988765 4566999986 57899999999999876432 344555554 67899999999
Q ss_pred hHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-ccccCCHHHHHHHHhhCCcCCc---
Q psy10189 246 RADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-VVKFNSLNELVEYHRTASVSRS--- 321 (376)
Q Consensus 246 r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~-~~~f~sl~~lv~~y~~~~~~~~--- 321 (376)
|.+||..|.+.++|+||||.+....+.|++|+++++.|+|++|... +|++.+. ...|.|+.|||+||++|++..+
T Consensus 694 Raqaes~Lk~~~ngT~LVR~r~kea~e~AISikynnevKHikI~~~-dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~ 772 (865)
T KOG2996|consen 694 RAQAESTLKNRPNGTYLVRYRTKEAKEFAISIKYNNEVKHIKIETN-DGKVHITEDKKFNSLVELVEYYQSHSLKEIFKA 772 (865)
T ss_pred hhhhhhHhhcCCCceEEEEecccchhheeEEEEeccccceEEEEec-CCeEEechhhhhhhHHHHHHHHHhccHHHHHHH
Confidence 9999999999999999999998788899999999999999999875 7889998 5999999999999999998865
Q ss_pred ceeeeCCCCCcc---------------------ceEEEeccCCCCCCCCccccccceeee--ecCC
Q psy10189 322 QDVKLRDMVPEE---------------------CLVQALYDFTPQEPGELEFRRDLKIKR--RKSA 364 (376)
Q Consensus 322 ~~~~L~~p~~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~ 364 (376)
++++|+.|+..+ ..+.|.|||.+++..||+|++|++++- ++|+
T Consensus 773 LDTtLk~Pyke~e~sa~~~~~~~~~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~ 838 (865)
T KOG2996|consen 773 LDTTLKFPYKEPEHSAGQRGNRAGNSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDKVGE 838 (865)
T ss_pred hhhhhcCCCcChhhhhhhccccccccccCcceeeeeeeccccCCCchhhcccccCCEEEEehhccc
Confidence 688999998622 235678999999999999999988765 8877
No 9
>KOG4226|consensus
Probab=99.94 E-value=1.7e-26 Score=193.22 Aligned_cols=139 Identities=42% Similarity=0.722 Sum_probs=125.9
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEec-cCCccceeec-cCCccceecccccccc-----------------------
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNM-EDDMNWYRAE-LDGKEGLIPSNYIEMK----------------------- 56 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~-~~~~~W~~~~-~~g~~G~vP~nyve~~----------------------- 56 (376)
.++|||+|.+.+++||+|.+||.++|+++ ..|+.||.++ .+|+.|+||.|||...
T Consensus 193 vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~ts~~~~~s~~pq~sgn~p 272 (379)
T KOG4226|consen 193 VVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSDGPSTSKALHPSHAPQISGNGP 272 (379)
T ss_pred EEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEeccCccccccCCccccccccCCCC
Confidence 47999999999999999999999999986 5667899999 7899999999998621
Q ss_pred -------ccccccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchh
Q psy10189 57 -------NHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLN 128 (376)
Q Consensus 57 -------~~~w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~ 128 (376)
..+||+|.|+|.+|+.+|.. +.+|.||||+|++++++|++|++..++.+||++. .-++.|.+...+|.++.
T Consensus 273 ~~sg~~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq-~~d~~ycIGqRkF~tmd 351 (379)
T KOG4226|consen 273 SSSGRFAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQ-LVDNVYCIGQRKFHTMD 351 (379)
T ss_pred CccccccCCcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEE-EecceEEeccceeccHH
Confidence 24699999999999999955 8999999999999999999999999999999996 46778999999999999
Q ss_pred hhHhhhhcccccc
Q psy10189 129 ELVEYHRTASVSR 141 (376)
Q Consensus 129 ~li~~~~~~~~~~ 141 (376)
+||+||+..++-.
T Consensus 352 ~Lv~HY~kaPIft 364 (379)
T KOG4226|consen 352 ELVEHYKKAPIFT 364 (379)
T ss_pred HHHHhhhcCCcee
Confidence 9999999988643
No 10
>KOG4637|consensus
Probab=99.94 E-value=1.2e-26 Score=202.01 Aligned_cols=96 Identities=31% Similarity=0.401 Sum_probs=87.2
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEec-cccCCHHHHHHH
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWV-VKFNSLNELVEY 312 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~-~~f~sl~~lv~~ 312 (376)
.....|+.+.+.|..|+.+|+++++|+||||.| +..|.|+|||..++.|+|+.|.++..|+.|... ..+.||.+||.|
T Consensus 329 ~~e~~w~~~~a~r~kAe~llrg~~dGtFLIR~s-s~~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~h 407 (464)
T KOG4637|consen 329 NDEKTWRVRDANRDKAEELLRGKPDGTFLIRES-SKGGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLH 407 (464)
T ss_pred hhhhHhHHhhhhHHHHHHHhcCCCCCeEEEeec-cCCCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHHHH
Confidence 455689999999999999999999999999997 688999999999999999999999999888874 789999999999
Q ss_pred HhhCCcCCc---ceeeeCCCC
Q psy10189 313 HRTASVSRS---QDVKLRDMV 330 (376)
Q Consensus 313 y~~~~~~~~---~~~~L~~p~ 330 (376)
|+++++..+ ..++|++|+
T Consensus 408 Y~h~SLe~HnDal~ttLr~Pv 428 (464)
T KOG4637|consen 408 YQHTSLEQHNDALTTTLRYPV 428 (464)
T ss_pred HhhhhHHhhccccccccccce
Confidence 999987754 578899987
No 11
>KOG1029|consensus
Probab=99.93 E-value=7.6e-26 Score=213.10 Aligned_cols=168 Identities=24% Similarity=0.437 Sum_probs=107.7
Q ss_pred CEEEEeecCCCCCCCCccccCCCEEEEEec-cCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCC
Q psy10189 1 MEAIAKHDFNATAEDELSFRKSQVLKILNM-EDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHE 79 (376)
Q Consensus 1 ~~~~al~~y~~~~~~eLsf~~Gd~i~v~~~-~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~ 79 (376)
++|.|||.|++++.+||+|..||+|.|.+. ..++||..|..+|+.||||.|||+.....-..+.++.-.+ |..
T Consensus 694 vkyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel~gktGWFPenyvEki~~~e~p~~v~Pv~~---l~~--- 767 (1118)
T KOG1029|consen 694 VKYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGELRGKTGWFPENYVEKIPAVETPGGVPPVQN---LPP--- 767 (1118)
T ss_pred EEEeeecccccCCcccccccCCCEEEEehhccCCcccccceeccccCcCcHHHHhhcccCCCCCCCCchhc---CCC---
Confidence 379999999999999999999999999975 6778999999999999999999996543211111111100 000
Q ss_pred ccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccc-cccccccCC---Cchhh
Q psy10189 80 GAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSR-SQDVKLRDM---VPEEC 155 (376)
Q Consensus 80 G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~-~~~~~~~~~---~~~~~ 155 (376)
..-+ ..|.+..+.++- .++.. ++.+ ++.. .....+..| .-...
T Consensus 768 ~~~p-sas~nq~a~~ad--~~~~~--------------------~n~~----------~~t~~aA~p~~tapg~~eve~l 814 (1118)
T KOG1029|consen 768 TMTP-SASVNQIAVVAD--TKNES--------------------ANAM----------GLTEGAAPPALTAPGQGEVEIL 814 (1118)
T ss_pred CCCc-ccccccceeecc--cccch--------------------hhcc----------CCCCCCCCccccCCCchhhhhh
Confidence 0000 000000000000 00000 0000 0000 000111111 11124
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccc
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILN 208 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~ 208 (376)
+|+|+|.|.+..+.+|+|.+||+|+|+++. +.||.|...|+.||||.+||..
T Consensus 815 q~iA~y~wrakke~dLsFskgd~I~Vlekq-emwW~G~v~g~~GwFPksYVk~ 866 (1118)
T KOG1029|consen 815 QAIALYPWRAKKENDLSFSKGDTITVLEKQ-EMWWFGEVAGEIGWFPKSYVKE 866 (1118)
T ss_pred hHHhhccccccccccccccCCCeeeeehhc-cceecccccCccCcCcHHhhhh
Confidence 799999999999999999999999999876 6799999999999999999984
No 12
>KOG3601|consensus
Probab=99.92 E-value=4.8e-26 Score=184.68 Aligned_cols=179 Identities=58% Similarity=0.921 Sum_probs=158.9
Q ss_pred hhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccccCcchhhhccCCCCCCcccccccccc
Q psy10189 157 VQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMEDDMNWYRAELDGKEGLIPSNYIEMKN 236 (376)
Q Consensus 157 ~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~ 236 (376)
+.++++|.+...+||+|.+|+.+.+++..+. .+|.+..+.|.+|++|.++..+..
T Consensus 3 a~a~n~f~a~i~dELsFlkg~~lk~l~~~d~-------------------------~nw~~ael~g~~g~~P~Nai~~~~ 57 (222)
T KOG3601|consen 3 AVAKNDFLAGIRDELSFLKGDNLKILNMEDD-------------------------INWYKAELDGPEGFIPKNAIRMKP 57 (222)
T ss_pred hhhhhhhhhcCcccceeecCCceEecchHHh-------------------------hhhhhHhhcCccccCccccccccc
Confidence 5688999999999999999999988876532 345555666677777777777788
Q ss_pred ccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeccccCCHHHHHHHHhhC
Q psy10189 237 HDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTA 316 (376)
Q Consensus 237 ~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~lv~~y~~~ 316 (376)
.+||++.++|..|+++|.++.+|+||+|.+++.+|.|++|+++...|.|+++.+...++|++....|+|+.+|++||..+
T Consensus 58 ~~wve~~i~r~~ae~~l~~~~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~ 137 (222)
T KOG3601|consen 58 HEWVEGLIPRPLAEDLLSKKRDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTA 137 (222)
T ss_pred ccceecccccchhhhhhhccCcchhhhhhhhcCcccccccccCCCCceeccccccCccccccchhhccCCCCCcccCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcceeeeCCCC---------CccceEEEeccCCCCCCCCccccccceeee
Q psy10189 317 SVSRSQDVKLRDMV---------PEECLVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 317 ~~~~~~~~~L~~p~---------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
+..++..+.|+... +..++++|+|+|.+..+.+|.|++|+.|..
T Consensus 138 s~~r~~qi~l~d~~~~~~~~~~~~~~~yqQa~~df~~~pp~ql~f~~gq~~~v 190 (222)
T KOG3601|consen 138 SQSRNQQIFLRDMEPPPAPLPPAPTNYYQQALYDFQPQPPGQLAFRRGQQIQV 190 (222)
T ss_pred ccccceeeeecccccccccCCCCccchhhhhcCCCCCCCchhhccccCCccee
Confidence 99998888887644 345889999999999999999999988764
No 13
>KOG4278|consensus
Probab=99.91 E-value=2.8e-24 Score=200.41 Aligned_cols=139 Identities=36% Similarity=0.667 Sum_probs=127.7
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccc----ccccccccccCCHHHHHHHhcCCC
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIE----MKNHDWYYGRITRADAERLLSNKH 78 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve----~~~~~w~~g~isr~~ae~~l~~~~ 78 (376)
+||||||.+.++..||+.+||.++|+..+....|.+++....+||||+||+. +....||||.++|..||.+|....
T Consensus 93 FVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGqGWVPSNyItPvNSLeKhsWYHGpvSRsaaEy~LsSgI 172 (1157)
T KOG4278|consen 93 FVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAEYILSSGI 172 (1157)
T ss_pred eEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCCccccccccccccchhhcccccCccccchhhhhhhcCc
Confidence 6999999999999999999999999988666679999965555999999997 456889999999999999999999
Q ss_pred CccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEecee-ecchhhhHhhhhcccccc
Q psy10189 79 EGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVK-FNSLNELVEYHRTASVSR 141 (376)
Q Consensus 79 ~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~-f~sl~~li~~~~~~~~~~ 141 (376)
.|+||||+|++++|.|++|+++.++|.||+|....+|+.++.... |.+|.+||+||.....+.
T Consensus 173 nGSFLVRESEsSpgQ~sISlRyeGRVyHYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGL 236 (1157)
T KOG4278|consen 173 NGSFLVRESESSPGQYSISLRYEGRVYHYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGL 236 (1157)
T ss_pred ccceEEeeccCCCcceeEEEEecceEEEEEeeccCCccEEEeehhhhhHHHHHHhhccccccce
Confidence 999999999999999999999999999999999999998888775 999999999999877654
No 14
>KOG4792|consensus
Probab=99.89 E-value=6.2e-23 Score=167.49 Aligned_cols=157 Identities=26% Similarity=0.614 Sum_probs=129.2
Q ss_pred ccccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEc-C------CCcEEEeceeecch
Q psy10189 55 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRD-S------SGKFFLWVVKFNSL 127 (376)
Q Consensus 55 ~~~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~-~------~~~~~~~~~~f~sl 127 (376)
.....||+|.|+|++|.++|.+...|.||+|+|.+.+|+|+||+..+++|.||.|... + ...+-+....|++|
T Consensus 8 ~er~swYfg~mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd~l 87 (293)
T KOG4792|consen 8 SERSSWYFGPMSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIGDQEFDSL 87 (293)
T ss_pred hhccceecCcccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeeccccccch
Confidence 3457899999999999999999889999999999999999999999999999999862 1 12577777889999
Q ss_pred hhhHhhhhcccccccccccccCCC----------chhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee-CC
Q psy10189 128 NELVEYHRTASVSRSQDVKLRDMV----------PEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI-GA 196 (376)
Q Consensus 128 ~~li~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~-~~ 196 (376)
..|++||+-+-+....-.....-. -....+.++|+|.+.++++|.|++|+++.|+++..+.||.++. .|
T Consensus 88 PaLL~fykihyLdtttLi~p~~r~~~~~~~~~~~~~~~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arns~G 167 (293)
T KOG4792|consen 88 PALLEFYKIHYLDTTTLIEPAKRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARNSEG 167 (293)
T ss_pred HHHHhheeEeeeccccccccccccccccCcccchhhhhheeeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhccCC
Confidence 999999986654322111100000 0124677899999999999999999999999999999999996 79
Q ss_pred eeeeeeccccccccc
Q psy10189 197 RKGLFPATYILNMED 211 (376)
Q Consensus 197 ~~G~~P~~~v~~~~~ 211 (376)
+.|.+|.+||+....
T Consensus 168 k~GmIPvpYVe~~~~ 182 (293)
T KOG4792|consen 168 KRGMIPVPYVEKYRP 182 (293)
T ss_pred cccceechHHHhhhh
Confidence 999999999987643
No 15
>KOG4225|consensus
Probab=99.86 E-value=4.9e-22 Score=177.32 Aligned_cols=131 Identities=34% Similarity=0.664 Sum_probs=105.0
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCCcc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEGA 81 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G~ 81 (376)
.+.|+|+|++++..||+|.+||+|.|+.+ .|.+|+.|..+|+.|+||+|||++.... +.|
T Consensus 232 ~aralf~F~~qt~kEL~~~kGDIVyI~rk-vD~nWyeGEhhGr~GifP~sYvE~~~~~--------e~~----------- 291 (489)
T KOG4225|consen 232 AARALFDFEAQTPKELPFNKGDIVYILRK-VDQNWYEGEHHGRVGIFPASYVEILTPR--------EKA----------- 291 (489)
T ss_pred hhhheeccccCCccccccCCCCEEEEEee-ccCceeeeeecceecceechheeecCcc--------ccc-----------
Confidence 36899999999999999999999999987 6679999999999999999999965431 000
Q ss_pred EEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccccccccccCCCchhhhhhhcc
Q psy10189 82 FLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMVPEECLVQALY 161 (376)
Q Consensus 82 flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 161 (376)
.+. . ..+.-.......+|.|
T Consensus 292 --------qP~---------------------------------------------------~-~~P~q~~~~g~a~A~y 311 (489)
T KOG4225|consen 292 --------QPA---------------------------------------------------R-PPPQQVLEQGEAIAKY 311 (489)
T ss_pred --------CcC---------------------------------------------------C-CCcccccccccccccC
Confidence 000 0 0000000012478999
Q ss_pred cCCCCCCCceeccCCCEEEEEecCCCcceeeeeC--CeeeeeecccccccccC
Q psy10189 162 DFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIG--ARKGLFPATYILNMEDD 212 (376)
Q Consensus 162 ~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~--~~~G~~P~~~v~~~~~~ 212 (376)
+|.+..+.||++++|+.+.++.+.+.+|..|.+. ++.|+||.+||+.+..+
T Consensus 312 ~F~~~s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~ 364 (489)
T KOG4225|consen 312 NFNADSPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSP 364 (489)
T ss_pred CCCCCCchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhcc
Confidence 9999999999999999999999999999999974 89999999999998654
No 16
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.85 E-value=8.1e-21 Score=142.61 Aligned_cols=93 Identities=44% Similarity=0.702 Sum_probs=82.5
Q ss_pred cccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-ccccCCHHHHHHHHhhC
Q psy10189 238 DWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-VVKFNSLNELVEYHRTA 316 (376)
Q Consensus 238 ~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~-~~~f~sl~~lv~~y~~~ 316 (376)
+||||.|+|++|+++|.+.++|+||||.|.+.++.|+||++.++.++||+|....++.++.. ...|+||.|||+||+.+
T Consensus 1 ~w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~ 80 (94)
T cd00173 1 PWYHGPISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKN 80 (94)
T ss_pred CccccCCCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhC
Confidence 69999999999999999889999999999878899999999999999999999887766666 79999999999999999
Q ss_pred CcCCcceeeeCCCC
Q psy10189 317 SVSRSQDVKLRDMV 330 (376)
Q Consensus 317 ~~~~~~~~~L~~p~ 330 (376)
++.....+.|+.|+
T Consensus 81 ~~~~~~~~~L~~p~ 94 (94)
T cd00173 81 PLSDGLGVKLRYPV 94 (94)
T ss_pred ccCCCcccEeCCcC
Confidence 86333466777763
No 17
>KOG4792|consensus
Probab=99.85 E-value=2.8e-21 Score=157.86 Aligned_cols=123 Identities=28% Similarity=0.551 Sum_probs=105.0
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcC-C------CcEEEeccccCCH
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDS-S------GKFFLWVVKFNSL 306 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~-~------~~~~~~~~~f~sl 306 (376)
.+...||+|.|+|+||..+|.+...|.||||+|.+.+|+|+|||+.+.+|.||.|.... + ..+.|+++.|++|
T Consensus 8 ~er~swYfg~mSRqeA~~lL~~~r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd~l 87 (293)
T KOG4792|consen 8 SERSSWYFGPMSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIGDQEFDSL 87 (293)
T ss_pred hhccceecCcccHHHHHHHhcCcceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeeccccccch
Confidence 46678999999999999999998899999999998899999999999999999998621 1 1588899999999
Q ss_pred HHHHHHHhhCCcCCcceeeeCCCCCcc-------------ceEEEeccCCCCCCCCccccccceee
Q psy10189 307 NELVEYHRTASVSRSQDVKLRDMVPEE-------------CLVQALYDFTPQEPGELEFRRDLKIK 359 (376)
Q Consensus 307 ~~lv~~y~~~~~~~~~~~~L~~p~~~~-------------~~~~~~~~~~~~~~~~l~~~~~~~~~ 359 (376)
++|++||+-+-|.. ++|..|+++. ..++|+|+|.+.+.++|.|+||+++.
T Consensus 88 PaLL~fykihyLdt---ttLi~p~~r~~~~~~~~~~~~~~~~vr~~fdF~G~deeDLPFkkGeiL~ 150 (293)
T KOG4792|consen 88 PALLEFYKIHYLDT---TTLIEPAKRSRQGSGVILRQEEAEYVRALFDFNGNDEEDLPFKKGEILR 150 (293)
T ss_pred HHHHhheeEeeecc---ccccccccccccccCcccchhhhhheeeeeccCCCccccCCcccCcEEE
Confidence 99999998876543 4566655432 45788999999999999999997754
No 18
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.85 E-value=7e-21 Score=139.60 Aligned_cols=82 Identities=48% Similarity=0.796 Sum_probs=76.2
Q ss_pred ccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEec-cccCCHHHHHHHHhh
Q psy10189 237 HDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWV-VKFNSLNELVEYHRT 315 (376)
Q Consensus 237 ~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~-~~f~sl~~lv~~y~~ 315 (376)
++||||.|+|++|+++|.+.++|+||||.|.+.++.|+||++.++.++||+|...++|.|++.+ ..|+||.+||+||+.
T Consensus 1 ~~w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~ 80 (84)
T smart00252 1 QPWYHGFISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQK 80 (84)
T ss_pred CCeecccCCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhh
Confidence 4899999999999999998889999999998778999999999999999999988778898886 999999999999998
Q ss_pred CCc
Q psy10189 316 ASV 318 (376)
Q Consensus 316 ~~~ 318 (376)
+++
T Consensus 81 ~~~ 83 (84)
T smart00252 81 NSL 83 (84)
T ss_pred CCC
Confidence 765
No 19
>KOG4348|consensus
Probab=99.84 E-value=3.8e-22 Score=177.41 Aligned_cols=154 Identities=23% Similarity=0.578 Sum_probs=112.2
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCCcc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEGA 81 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G~ 81 (376)
.|++-|||+|+.++||+++.|++|.-+.+ .+.|||.|..||++|+||.|||.......- +..
T Consensus 3 d~ive~dy~a~hddelti~vgeii~nvkk-~e~gw~egelngrrg~fpdnfV~eik~e~k-----------------~d~ 64 (627)
T KOG4348|consen 3 DYIVEYDYDAVHDDELTIRVGEIIRNVKK-LEEGWLEGELNGRRGQFPDNFVVEIKVEFK-----------------DDD 64 (627)
T ss_pred ceeeecccccccCceeeEeHHHHHHhhhh-hccceeeceeccccccCCchhhhhhhhhcc-----------------ccc
Confidence 78999999999999999999999999887 577999999999999999999874332100 000
Q ss_pred EEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhccccccccccccc--CCCchhhhhhh
Q psy10189 82 FLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLR--DMVPEECLVQA 159 (376)
Q Consensus 82 flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~--~~~~~~~~~~a 159 (376)
...+.+.. + |++....+++...+...-+ .+.++..+|.+
T Consensus 65 l~nk~~r~------------------------------------~---l~q~~s~n~l~~~q~v~rtn~~~q~~~r~c~v 105 (627)
T KOG4348|consen 65 LVNKLSRD------------------------------------S---LVQMTSRNPLTVHQQVERTNPPPQPQARICVV 105 (627)
T ss_pred cccccccc------------------------------------c---hhhcccCCCccccCcccccCCCCCccceeEEE
Confidence 00111100 0 0000011111111111111 22344578999
Q ss_pred cccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccccC
Q psy10189 160 LYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMEDD 212 (376)
Q Consensus 160 l~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~~ 212 (376)
+|.|.++.++||+|..||+|.|++...+|||.|.++|+.|.||+|||...+.+
T Consensus 106 ~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~Lngk~GmFPsNFVkel~~~ 158 (627)
T KOG4348|consen 106 TFAYSPQNDDELELKVGDIIELISEVEEGWWKGKLNGKVGMFPSNFVKELPTP 158 (627)
T ss_pred EEeecCCCCceeeeeeccHHHhhhHhhhhhhhceecCcccccchhhceecCCC
Confidence 99999999999999999999999999999999999999999999999987654
No 20
>KOG4348|consensus
Probab=99.84 E-value=1.2e-21 Score=174.34 Aligned_cols=198 Identities=19% Similarity=0.383 Sum_probs=120.5
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHH--HHHHhcCCCC
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRAD--AERLLSNKHE 79 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~--ae~~l~~~~~ 79 (376)
.|+|+|.|-+++++||.|+.||+|+|+.. .++|||.|.++|+.|+||+|||+....+--...+..++ .+..|.
T Consensus 102 ~c~v~f~Y~pqndDELelkVGDiIeli~e-VEeGWw~G~Lngk~GmFPsNFVkel~~~sde~~~aqd~~~S~stla---- 176 (627)
T KOG4348|consen 102 ICVVTFAYSPQNDDELELKVGDIIELISE-VEEGWWKGKLNGKVGMFPSNFVKELPTPSDESAAAQDPAASASTLA---- 176 (627)
T ss_pred eEEEEEeecCCCCceeeeeeccHHHhhhH-hhhhhhhceecCcccccchhhceecCCCCcchhhhcCcccchhhhc----
Confidence 59999999999999999999999999986 77799999999999999999998654331111111111 111111
Q ss_pred ccEEEeecCCCCCc-eEEEEEeCCe-eEEEEEEEcCCCcEEEecee---ecchhhhHhhhh-----cccccccc---c--
Q psy10189 80 GAFLIRVSESSPGD-FSLSVKCSDG-VQHFKVLRDSSGKFFLWVVK---FNSLNELVEYHR-----TASVSRSQ---D-- 144 (376)
Q Consensus 80 G~flvR~s~~~~~~-~~Ls~~~~~~-v~h~~I~~~~~~~~~~~~~~---f~sl~~li~~~~-----~~~~~~~~---~-- 144 (376)
.+...... ..-|-..++. .+..+|...+.|..|....- ..+...-.++.. ...++.+. .
T Consensus 177 ------gst~~~ps~s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~asT~s~d~t 250 (627)
T KOG4348|consen 177 ------GSTARTPSKSIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSASTQSVDIT 250 (627)
T ss_pred ------CcCCCCCcccccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccCccccCcccc
Confidence 11111110 0111111222 23444554555544433210 111000001100 01111000 0
Q ss_pred -ccccCCCchhhhhhhcccCCCCCCCceeccCCCEEEEEec--CCCcceeeeeCCeeeeeecccccccc
Q psy10189 145 -VKLRDMVPEECLVQALYDFTPQEPGELEFRRGDVITVTDR--SDQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 145 -~~~~~~~~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~--~~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
.....-......|+++|.|++++++||.+++||++.++.+ .+-|||.|.++|+.|.||-|||..+.
T Consensus 251 ktd~~~~tKtKeycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~GvFPDNFv~lv~ 319 (627)
T KOG4348|consen 251 KTDTAETTKTKEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKKGVFPDNFVELVQ 319 (627)
T ss_pred ccccccchhhhhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCccccCCchhhhhcC
Confidence 0001111224689999999999999999999999999876 46789999999999999999998765
No 21
>KOG1264|consensus
Probab=99.83 E-value=2.7e-20 Score=177.00 Aligned_cols=150 Identities=33% Similarity=0.682 Sum_probs=124.7
Q ss_pred ccccccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCC-cEEEeceeecchhhhHhhh
Q psy10189 57 NHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSG-KFFLWVVKFNSLNELVEYH 134 (376)
Q Consensus 57 ~~~w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~-~~~~~~~~f~sl~~li~~~ 134 (376)
+.+|||...+|++||.+|.. ..+|+|||| +...+..|++|+..+++++|++|.+ +| .|.+....|.+|.+||+||
T Consensus 647 ~k~W~~as~treqAE~mL~rvp~DGaFLiR-~~~~~nsy~iSfr~~gkikHcRi~r--dGr~fvl~t~~FesLv~lv~yY 723 (1267)
T KOG1264|consen 647 SKPWYHASLTREQAEDMLMRVPRDGAFLIR-KREGSNSYAISFRARGKIKHCRINR--DGRHFVLGTSAFESLVELVSYY 723 (1267)
T ss_pred CCccccccccHHHHHHHHhhCccCcceEEE-eccCCceEEEEEEEcCcEeEEEEcc--CceEEEeccHHHHHHHHHHHHH
Confidence 46799999999999999998 678999999 7778889999999999999999974 44 4555555599999999999
Q ss_pred hcccccccccccccCCC-------------------------------c--hhhhhhhcccCCCCCCCceeccCCCEEEE
Q psy10189 135 RTASVSRSQDVKLRDMV-------------------------------P--EECLVQALYDFTPQEPGELEFRRGDVITV 181 (376)
Q Consensus 135 ~~~~~~~~~~~~~~~~~-------------------------------~--~~~~~~al~~~~~~~~~eL~~~~g~~i~v 181 (376)
..+++-+.- .++.|. | ....+.|||+|.|+.++||+|.+|.+|++
T Consensus 724 ~k~~lyR~m--kLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSFpk~aiItn 801 (1267)
T KOG1264|consen 724 EKHPLYRKM--KLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSFPKGAIITN 801 (1267)
T ss_pred hcChhhhcc--cccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccccccceeEe
Confidence 877644321 111111 1 13679999999999999999999999999
Q ss_pred EecCCCcceeeeeCC-eeeeeeccccccccc
Q psy10189 182 TDRSDQHWWHGEIGA-RKGLFPATYILNMED 211 (376)
Q Consensus 182 ~~~~~~~w~~~~~~~-~~G~~P~~~v~~~~~ 211 (376)
+++..++||.|..+| ..+|||+|||+.+.+
T Consensus 802 v~keeg~wWrGdYGg~iq~wfPsnyVeei~~ 832 (1267)
T KOG1264|consen 802 VSKEEGGWWRGDYGGRIQQWFPSNYVEEIST 832 (1267)
T ss_pred eeccCCceeecccccceeeeccHHHhhhhcc
Confidence 999999999999875 589999999998865
No 22
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.82 E-value=3.4e-20 Score=133.51 Aligned_cols=75 Identities=47% Similarity=0.801 Sum_probs=70.5
Q ss_pred ccccccChHHHHHhhcC-CCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-ccccCCHHHHHHHH
Q psy10189 239 WYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-VVKFNSLNELVEYH 313 (376)
Q Consensus 239 w~~g~i~r~~ae~~L~~-~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~-~~~f~sl~~lv~~y 313 (376)
||||.|+|++|+++|.. .++|+||||.|.+.++.|+|||+.++.|+||+|..++++.|++. +..|+||.+||+||
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y 77 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY 77 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence 99999999999999998 89999999999888899999999999999999999988867776 58899999999998
No 23
>KOG1029|consensus
Probab=99.82 E-value=1.5e-20 Score=177.65 Aligned_cols=222 Identities=25% Similarity=0.492 Sum_probs=131.8
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHHhcCCCCcc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEGA 81 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G~ 81 (376)
+|+|+|+|.+..+.+|+|.+||+|.|+++. +.||.|...|..||||.+||+..... .+.+...+....+....+++
T Consensus 815 q~iA~y~wrakke~dLsFskgd~I~Vlekq--emwW~G~v~g~~GwFPksYVk~~~~~--t~st~~~~s~es~sae~p~~ 890 (1118)
T KOG1029|consen 815 QAIALYPWRAKKENDLSFSKGDTITVLEKQ--EMWWFGEVAGEIGWFPKSYVKEVGAI--TGSTTKIESPESLSAEAPGA 890 (1118)
T ss_pred hHHhhccccccccccccccCCCeeeeehhc--cceecccccCccCcCcHHhhhhcccc--ccccccccCcccccccCccc
Confidence 589999999999999999999999999963 36999999999999999999832210 11111111111111111111
Q ss_pred EE----EeecCCCCCceEEEEE-e------CC---eeEEEEEEEcCCCcEEEecee-----ecchhhhHhhhhccccccc
Q psy10189 82 FL----IRVSESSPGDFSLSVK-C------SD---GVQHFKVLRDSSGKFFLWVVK-----FNSLNELVEYHRTASVSRS 142 (376)
Q Consensus 82 fl----vR~s~~~~~~~~Ls~~-~------~~---~v~h~~I~~~~~~~~~~~~~~-----f~sl~~li~~~~~~~~~~~ 142 (376)
-- ...+...++.-...+- + ++ ..-|-.+...-+|.+..+... |++ +||...-....
T Consensus 891 ~~~~a~~taa~v~~qeq~ya~~~~~e~vEq~dlt~~egd~iLvtekdgeww~gt~~~r~gifPa-----n~y~r~~~q~g 965 (1118)
T KOG1029|consen 891 AASDATPTAAPVAPQEQLYAVYPYFEAVEQGDLTFHEGDEILVTEKDGEWWTGTCGDREGIFPA-----NYYVRPKDQEG 965 (1118)
T ss_pred cccccCcccccccccceeEEEecccccccCCCccccccceEEEeeccCceeccccCCccccccc-----cceeeehhccC
Confidence 00 0011111111111100 0 00 011112222333444333211 222 12211110000
Q ss_pred ccccc-cCCC-chhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CC---eeeeeecccccccc-----
Q psy10189 143 QDVKL-RDMV-PEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GA---RKGLFPATYILNME----- 210 (376)
Q Consensus 143 ~~~~~-~~~~-~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~---~~G~~P~~~v~~~~----- 210 (376)
..... ..+. .....+.++.+|.|..+.+|++..|++|.|..+...|||.|.+ +| +.||||++||..+.
T Consensus 966 s~Tp~k~g~~~kkpeiAqVia~yvAs~peQLsla~GqlIlIrkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~r 1045 (1118)
T KOG1029|consen 966 SGTPPKQGPTPKKPEIAQVIADYVASGPEQLSLAPGQLILIRKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGR 1045 (1118)
T ss_pred CCCCCCCCCCCCCchhhhhhhhhhccCchhccccCccEEEEEecCCCccchhhHhhcCCccccccccHHHhhhccCCCCc
Confidence 00000 0111 1124566778999999999999999999999999999999986 33 57999999997542
Q ss_pred --------------------------------------cCcchhhhccCCCCCCcccccc
Q psy10189 211 --------------------------------------DDMNWYRAELDGKEGLIPSNYI 232 (376)
Q Consensus 211 --------------------------------------~~~~~~~~~~~~~~g~~p~~~~ 232 (376)
.++.||++..+|..|++|+|||
T Consensus 1046 aTPa~~~v~qviamYdY~AqndDELsF~kgdiI~VlnkdepeWW~Ge~ng~sGLFPSNYV 1105 (1118)
T KOG1029|consen 1046 ATPATRPVCQVIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWWSGERNGKSGLFPSNYV 1105 (1118)
T ss_pred CCCCCCccceeEEeeccccCCcccccccCCCEEEecCCCChhhhcccccCccccCccccc
Confidence 2567999999999999999998
No 24
>KOG0197|consensus
Probab=99.79 E-value=3.9e-19 Score=164.56 Aligned_cols=139 Identities=39% Similarity=0.724 Sum_probs=120.6
Q ss_pred EEEEeecCCCCCCCCccccCCCE-EEEEeccCCccceeec--cCCccceecccccc----------ccccccccccCCHH
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQV-LKILNMEDDMNWYRAE--LDGKEGLIPSNYIE----------MKNHDWYYGRITRA 68 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~-i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve----------~~~~~w~~g~isr~ 68 (376)
.++|+|+|.+..+.+|+|.+||+ ..+++. .+..||.++ ..+.+|++|+|||. +...+||++.|+|.
T Consensus 13 ~~valyd~~s~~~~dLsf~~Gd~~~~~~~~-~~~~Ww~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~isR~ 91 (468)
T KOG0197|consen 13 IVVALYDYASRTPEDLSFRKGDVVLILLET-TNGDWWRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKISRE 91 (468)
T ss_pred eEEEeccccCCCccccccccCceEEEeecc-CChhHHHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhccccHH
Confidence 58999999999999999999999 777775 556788877 37899999999987 34688999999999
Q ss_pred HHHHHhcC--CCCccEEEeecCCCCCceEEEEEeCC------eeEEEEEEEcCCCcEE--Eecee-ecchhhhHhhhhcc
Q psy10189 69 DAERLLSN--KHEGAFLIRVSESSPGDFSLSVKCSD------GVQHFKVLRDSSGKFF--LWVVK-FNSLNELVEYHRTA 137 (376)
Q Consensus 69 ~ae~~l~~--~~~G~flvR~s~~~~~~~~Ls~~~~~------~v~h~~I~~~~~~~~~--~~~~~-f~sl~~li~~~~~~ 137 (376)
+|++.|.. ...|+||+|+|++.+++|++|+.... .++|++|.....+.+. +.... |+++.+|++||+.+
T Consensus 92 ~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~~~~~ 171 (468)
T KOG0197|consen 92 EAERQLLAPENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNYYSKN 171 (468)
T ss_pred HHHHhhcCCCCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhhhhcc
Confidence 99976666 56699999999999999999999866 8999999999888777 65554 99999999999987
Q ss_pred cccc
Q psy10189 138 SVSR 141 (376)
Q Consensus 138 ~~~~ 141 (376)
..+.
T Consensus 172 ~~gl 175 (468)
T KOG0197|consen 172 ADGL 175 (468)
T ss_pred Ccch
Confidence 7553
No 25
>KOG0194|consensus
Probab=99.69 E-value=1.8e-16 Score=149.04 Aligned_cols=124 Identities=29% Similarity=0.484 Sum_probs=99.5
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCc---e-EEEEEeC--CeeEEEEEEEcCCCcEEEeccccCCHH
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGD---F-SLSVKCS--DGVQHFKVLRDSSGKFFLWVVKFNSLN 307 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~---~-~ls~~~~--~~v~h~~I~~~~~~~~~~~~~~f~sl~ 307 (376)
+..++||||-+.|++|+.+|.+ +|.||||.+....+. + .||++.. ..++||.|...++..++.....|+|+.
T Consensus 46 ~~~~~~yHG~l~red~~~lL~~--~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~ 123 (474)
T KOG0194|consen 46 LRELPYYHGLLPREDAEKLLKN--DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTIS 123 (474)
T ss_pred hhcCccccccccHhHHHHHhCC--CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHH
Confidence 4457999999999999999998 999999999876553 3 8999875 789999999887755555679999999
Q ss_pred HHHHHHhhCCcCCc-ceeeeCCCCCccceEEEeccCCCCCCCCccccccceee-eecCCCCCCccceec
Q psy10189 308 ELVEYHRTASVSRS-QDVKLRDMVPEECLVQALYDFTPQEPGELEFRRDLKIK-RRKSAKTKDETTVRE 374 (376)
Q Consensus 308 ~lv~~y~~~~~~~~-~~~~L~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 374 (376)
+||.||..+....+ ....|..|+++..| +|...++.+ ++||+|+||||..|.
T Consensus 124 ~li~~~~~~~~~~~~~~~~L~~PI~r~~W---------------el~H~~v~l~kkLGeGaFGeV~~G~ 177 (474)
T KOG0194|consen 124 ELVNYYKFSKLEITGKNFFLKRPIPRQKW---------------ELSHSDIELGKKLGEGAFGEVFKGK 177 (474)
T ss_pred HHHHHHHhcccceeccceeeccccccccc---------------EEeccCccccceeecccccEEEEEE
Confidence 99999999987764 34458888766544 344444444 599999999998775
No 26
>KOG4637|consensus
Probab=99.68 E-value=3.9e-17 Score=142.96 Aligned_cols=99 Identities=26% Similarity=0.526 Sum_probs=88.9
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeccccCCHHHHHHHH
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYH 313 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~lv~~y 313 (376)
+..++||||.|+|+++...|+..|||+||||+..+-+|+|+|+++.++.++-++|...+....|.+...|+|+.+||+||
T Consensus 20 L~~a~WYWgdisReev~~~L~d~PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn~y 99 (464)
T KOG4637|consen 20 LQDAEWYWGDISREEVNKKLRDQPDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELINHY 99 (464)
T ss_pred hhhccccccccCHHHHHHHhcCCCCCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHHHH
Confidence 67789999999999999999999999999999877799999999999999999998866545567789999999999999
Q ss_pred hhCCcCC---cceeeeCCCCCc
Q psy10189 314 RTASVSR---SQDVKLRDMVPE 332 (376)
Q Consensus 314 ~~~~~~~---~~~~~L~~p~~~ 332 (376)
++.++.. .++++|.+||.+
T Consensus 100 r~~SL~~yN~~LDvrLlyPVs~ 121 (464)
T KOG4637|consen 100 RNESLAQYNPKLDVRLLYPVSR 121 (464)
T ss_pred hhhHHHhhCcccceeeechHHH
Confidence 9998774 368999999864
No 27
>KOG4225|consensus
Probab=99.65 E-value=1.5e-16 Score=142.59 Aligned_cols=175 Identities=28% Similarity=0.464 Sum_probs=105.3
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeecc--CCccceeccccccccccccccccCCHHHHHHHhcCCCC
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAEL--DGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHE 79 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~ 79 (376)
+++|+|+|.+..+.||+|++||.|.+..+ .+.+|.++.. .+..|.||.+||++....-.+.. + ..++
T Consensus 306 ~a~A~y~F~~~s~~Els~~kge~v~L~r~-vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~~~~---------~-~~~~ 374 (489)
T KOG4225|consen 306 EAIAKYNFNADSPVELSLRKGERVTLTRQ-VDENWYEGKIPGTNRQGIFPASYVEVIKSPKLELP---------L-DYPD 374 (489)
T ss_pred cccccCCCCCCCchhcccccCceEEEEEe-ccCceeeccccccccccccchhHhhhhhccccccc---------c-ccCC
Confidence 47899999999999999999999999987 6679999995 47899999999997654311110 0 0000
Q ss_pred ccEEEeecCCCCCceEEEEEe----CCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccccccccccCCCchhh
Q psy10189 80 GAFLIRVSESSPGDFSLSVKC----SDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMVPEEC 155 (376)
Q Consensus 80 G~flvR~s~~~~~~~~Ls~~~----~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~~~~~~~~ 155 (376)
-. ++.+.+ ..-+.++... -..++.........+ ++...-...........+. ...
T Consensus 375 ~p--~~p~~s-~~~~~~~~~s~~~~~~~~~t~~~~q~~~n-----------------~~qepr~~~~~~~~~qt~~-~~l 433 (489)
T KOG4225|consen 375 LP--IPPRSS-NELRPLSEDSMKNAWPQTHTQSSTQPPEN-----------------FPQEPRVTEKNDAHSQTSS-EPL 433 (489)
T ss_pred CC--CCcccc-hhhcccccchhhhcccccccccccCCCCC-----------------cccccccccccCcccCCCC-Ccc
Confidence 00 000000 0000000000 000000000000000 0000000000000000000 113
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeee--eCCeeeeeecccccc
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGE--IGARKGLFPATYILN 208 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~--~~~~~G~~P~~~v~~ 208 (376)
.++|||.|.++.++||.|+.||+|.|++++++||+.|+ ..|..|.||.|||++
T Consensus 434 ~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~ 488 (489)
T KOG4225|consen 434 KYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR 488 (489)
T ss_pred cceeccccCCCCchhheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence 48999999999999999999999999999999999994 689999999999986
No 28
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.63 E-value=2.5e-16 Score=101.58 Aligned_cols=49 Identities=41% Similarity=0.794 Sum_probs=44.1
Q ss_pred EeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccc
Q psy10189 5 AKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIE 54 (376)
Q Consensus 5 al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve 54 (376)
|+|+|.|++++||+|++||+|.|+.+ .+++||.++.+|+.|+||+|||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~-~~~~W~~g~~~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEK-SDDGWWYGRNTGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEE-SSTSEEEEEETTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEe-CCCCEEEEEECCEEEEECHHhCC
Confidence 79999999999999999999999986 67789999999999999999985
No 29
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.61 E-value=5.2e-15 Score=108.34 Aligned_cols=81 Identities=48% Similarity=0.799 Sum_probs=75.0
Q ss_pred cccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEec-eeecchhhhHhhhhc
Q psy10189 58 HDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWV-VKFNSLNELVEYHRT 136 (376)
Q Consensus 58 ~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~-~~f~sl~~li~~~~~ 136 (376)
.+||||.|+|++|+.+|...++|+||||.|.+.++.|+||+..++.++|++|.....+.|.+.+ ..|+++.+||++|..
T Consensus 1 ~~w~~g~i~r~~Ae~lL~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~~ 80 (84)
T smart00252 1 QPWYHGFISREEAEKLLKNEGDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQK 80 (84)
T ss_pred CCeecccCCHHHHHHHHhcCCCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHhh
Confidence 3799999999999999999889999999999989999999999999999999988878898887 569999999999987
Q ss_pred cc
Q psy10189 137 AS 138 (376)
Q Consensus 137 ~~ 138 (376)
++
T Consensus 81 ~~ 82 (84)
T smart00252 81 NS 82 (84)
T ss_pred CC
Confidence 65
No 30
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.58 E-value=6.7e-15 Score=105.79 Aligned_cols=75 Identities=47% Similarity=0.802 Sum_probs=70.3
Q ss_pred cccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEec-eeecchhhhHhhh
Q psy10189 60 WYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWV-VKFNSLNELVEYH 134 (376)
Q Consensus 60 w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~-~~f~sl~~li~~~ 134 (376)
||||.|+|++|+.+|.. .++|+||||.|.+.++.|+||+..++.+.|++|.....+.+++.. ..|+||.+||+||
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y 77 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY 77 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence 99999999999999999 999999999999999999999999999999999999988777765 4599999999987
No 31
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.57 E-value=2.2e-14 Score=107.54 Aligned_cols=81 Identities=43% Similarity=0.746 Sum_probs=74.7
Q ss_pred ccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-ceeecchhhhHhhhhcc
Q psy10189 59 DWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-VVKFNSLNELVEYHRTA 137 (376)
Q Consensus 59 ~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~-~~~f~sl~~li~~~~~~ 137 (376)
+||||.|+|++|+.+|.+.++|+||||.|.+.++.|+||+..++.+.|++|.....+.++.. ...|+|+.+||++|...
T Consensus 1 ~w~~g~i~r~~Ae~~L~~~~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~~ 80 (94)
T cd00173 1 PWYHGPISREEAEELLKKKPDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQKN 80 (94)
T ss_pred CccccCCCHHHHHHHHhcCCCceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhhC
Confidence 59999999999999999999999999999988999999999999999999998887776666 55699999999999988
Q ss_pred cc
Q psy10189 138 SV 139 (376)
Q Consensus 138 ~~ 139 (376)
++
T Consensus 81 ~~ 82 (94)
T cd00173 81 PL 82 (94)
T ss_pred cc
Confidence 75
No 32
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.45 E-value=1.2e-13 Score=89.02 Aligned_cols=49 Identities=55% Similarity=1.110 Sum_probs=45.1
Q ss_pred hcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccc
Q psy10189 159 ALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYIL 207 (376)
Q Consensus 159 al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~ 207 (376)
|+|+|.++.++||+|++||+|.|+.+.+++||.|+.+|+.|+||++||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRNTGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEETTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEECCEEEEECHHhCC
Confidence 6899999999999999999999999999999999999999999999985
No 33
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.45 E-value=6.5e-14 Score=93.23 Aligned_cols=53 Identities=40% Similarity=0.696 Sum_probs=46.3
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEE-eccCCccceeeccCCccceeccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKIL-NMEDDMNWYRAELDGKEGLIPSNYIEM 55 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~-~~~~~~~W~~~~~~g~~G~vP~nyve~ 55 (376)
.++|++||.++.+++|+|++||+|.|+ ++ .+++||.++.+|+.||||++||+.
T Consensus 1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~-~~~~ww~~~~~g~~G~~P~~~v~~ 54 (55)
T PF07653_consen 1 YYRAIFDYVAEDPDELSFKKGDVIEVLGEK-DDDGWWLGENNGRRGWFPSSYVEE 54 (55)
T ss_dssp EEEESSSBESSSTTB-EB-TTEEEEEEEEE-CSTSEEEEEETTEEEEEEGGGEEE
T ss_pred CEEEeEEECCCCCCceEEecCCEEEEEEee-cCCCEEEEEECCcEEEEcHHHEEE
Confidence 379999999999999999999999999 55 556899999999999999999974
No 34
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.38 E-value=4e-13 Score=86.66 Aligned_cols=46 Identities=41% Similarity=0.774 Sum_probs=40.3
Q ss_pred EEeecCCCCCCCCccccCCCEEEEEeccCCccceeecc--CCccceecc
Q psy10189 4 IAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAEL--DGKEGLIPS 50 (376)
Q Consensus 4 ~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~vP~ 50 (376)
+|+|+|+++.++||+|++||.|.|+++ .+++||.++. ++++||||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~-~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEK-SDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEE-SSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEe-cCCCEEEEEECCCCcEEEeeC
Confidence 699999999999999999999999997 5558999984 379999996
No 35
>KOG3632|consensus
Probab=99.33 E-value=1.8e-12 Score=126.49 Aligned_cols=153 Identities=32% Similarity=0.564 Sum_probs=101.5
Q ss_pred EEEEeecCCC--------CCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccccccccccCCHHHHHHH
Q psy10189 2 EAIAKHDFNA--------TAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERL 73 (376)
Q Consensus 2 ~~~al~~y~~--------~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~ 73 (376)
.+||||||++ ..+.||+|++||+|.|+...|.++++.+.++|..|+||.|+|...... + ++....
T Consensus 1140 ifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~ngr~GlIPcNmvae~~vd------~-eq~~~r 1212 (1335)
T KOG3632|consen 1140 IFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGELNGRRGLIPCNMVAEQPVD------N-EQTDRR 1212 (1335)
T ss_pred eeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecccccccccccccccccccCC------c-HHHHHH
Confidence 4799999998 567799999999999998778889999999999999999999754322 1 111111
Q ss_pred hcCCCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhcccccccccccccCCCch
Q psy10189 74 LSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRSQDVKLRDMVPE 153 (376)
Q Consensus 74 l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~~~~~~~~~~~~~~ 153 (376)
+. .|.. +..+...... |. .....+.-.++. .
T Consensus 1213 ~r---qG~l--------Psv~~~e~~~--------------gs---------------------~~s~g~~k~vp~---~ 1243 (1335)
T KOG3632|consen 1213 WR---QGLL--------PSVPTEEMRK--------------GS---------------------AFSDGQQKMVPW---P 1243 (1335)
T ss_pred HH---hccC--------CCCCchhhhc--------------cc---------------------ccCCCCccccCC---c
Confidence 11 0100 0000000000 00 000000001110 1
Q ss_pred hhhhhhcccCCCCCC-------CceeccCCCEEEEEec-CCCcceeeeeCCeeeeeecccccccc
Q psy10189 154 ECLVQALYDFTPQEP-------GELEFRRGDVITVTDR-SDQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 154 ~~~~~al~~~~~~~~-------~eL~~~~g~~i~v~~~-~~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
..+.+|.+||.+++. .+|.|+.||+|+|..+ .+++.+.|.++|+.|++|++++...+
T Consensus 1244 p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqkglvpsnfle~p~ 1308 (1335)
T KOG3632|consen 1244 PRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQKGLVPSNFLEAPN 1308 (1335)
T ss_pred hhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCccCccccccccCCC
Confidence 135778899988743 5899999999999976 56779999999999999999998753
No 36
>KOG0790|consensus
Probab=99.26 E-value=7.9e-12 Score=112.80 Aligned_cols=95 Identities=34% Similarity=0.596 Sum_probs=82.8
Q ss_pred ccccccccccccccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeCC---------eeEEEEEEEcCCCcEE
Q psy10189 49 PSNYIEMKNHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSD---------GVQHFKVLRDSSGKFF 118 (376)
Q Consensus 49 P~nyve~~~~~w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~~---------~v~h~~I~~~~~~~~~ 118 (376)
|.|.-++.+..||||.++..+|+++|.. +..|+||||+|.+.||+|+||+..++ +|.|..|...+ ++|.
T Consensus 101 pl~cAdptserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~-~kyd 179 (600)
T KOG0790|consen 101 PLNCADPTSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQE-GKYD 179 (600)
T ss_pred CCccCCchhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecc-cccc
Confidence 5666677788899999999999999955 89999999999999999999999866 79999999766 7888
Q ss_pred Eece-eecchhhhHhhhhccccccccc
Q psy10189 119 LWVV-KFNSLNELVEYHRTASVSRSQD 144 (376)
Q Consensus 119 ~~~~-~f~sl~~li~~~~~~~~~~~~~ 144 (376)
+.+. +|+|+.+||+||+.+++-....
T Consensus 180 VGgge~F~sltdLidhykknpmvEt~g 206 (600)
T KOG0790|consen 180 VGGGERFDSLTDLVEHYKKNPMVETLG 206 (600)
T ss_pred cCCccccchHHHHHHHhccCchhhhcc
Confidence 8765 5999999999999999765543
No 37
>KOG2199|consensus
Probab=99.23 E-value=2.6e-12 Score=114.28 Aligned_cols=52 Identities=35% Similarity=0.691 Sum_probs=49.3
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIE 54 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve 54 (376)
+++|||||+|..++||||++||+|.|++. .+.+||.|...+..|+||+|||.
T Consensus 217 kVRALYDFeAaE~nELsFkaGdIItVLd~-s~~~WWKG~~~~~~GlFPsnfVT 268 (462)
T KOG2199|consen 217 KVRALYDFEAAEDNELSFKAGDIITVLDD-SDPNWWKGENHRGIGLFPSNFVT 268 (462)
T ss_pred hhhhhhcccccCCCccceecCcEEEEccc-CCcchhccccCCcccccchhhhh
Confidence 58999999999999999999999999996 77799999999999999999986
No 38
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.21 E-value=1.3e-11 Score=82.08 Aligned_cols=53 Identities=40% Similarity=1.010 Sum_probs=47.4
Q ss_pred hhhcccCCCCCCCceeccCCCEEEEE-ecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 157 VQALYDFTPQEPGELEFRRGDVITVT-DRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 157 ~~al~~~~~~~~~eL~~~~g~~i~v~-~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
++|+++|.+..+++|+|.+||+|.|+ ++..++||.|+.+|+.||||.++|+++
T Consensus 2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~G~~P~~~v~~~ 55 (55)
T PF07653_consen 2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGENNGRRGWFPSSYVEEI 55 (55)
T ss_dssp EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEETTEEEEEEGGGEEEH
T ss_pred EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEECCcEEEEcHHHEEEC
Confidence 57899999999999999999999999 788889999999999999999999863
No 39
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=99.18 E-value=3.2e-11 Score=81.26 Aligned_cols=53 Identities=43% Similarity=0.820 Sum_probs=48.0
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccC-Cccceeccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELD-GKEGLIPSNYIEM 55 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~-g~~G~vP~nyve~ 55 (376)
.++|+|+|.+..+++|+|++||+|.|+.. .+.+||.++.. +++||||++|++.
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~-~~~~w~~~~~~~~~~G~vP~~~v~~ 57 (58)
T smart00326 4 QVRALYDYTAQDPDELSFKKGDIITVLEK-SDDGWWKGRLGRGKEGLFPSNYVEE 57 (58)
T ss_pred EEEEeeeeCCCCCCCCCCCCCCEEEEEEc-CCCCeEEEEeCCCCEEEEchHHEEE
Confidence 68999999999999999999999999987 46789999865 9999999999864
No 40
>KOG2070|consensus
Probab=99.18 E-value=1.2e-11 Score=112.87 Aligned_cols=54 Identities=33% Similarity=0.707 Sum_probs=49.8
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMK 56 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~ 56 (376)
.+.|.|+|+..++|||+|.+||+|.|-+. .+.|||+|.++|+.||||+|||..+
T Consensus 19 vvrAkf~F~gsNnDELsf~KgDvItVTq~-eeGGWWEGTlng~TGWFPsnYV~ei 72 (661)
T KOG2070|consen 19 VVRAKFNFQGSNNDELSFSKGDVITVTQV-EEGGWWEGTLNGRTGWFPSNYVREI 72 (661)
T ss_pred EEEEEeecccCCCceeccccCCEEEEEEe-ccCcceeccccCccCccchHHHHHH
Confidence 47899999999999999999999999986 6679999999999999999999743
No 41
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=99.16 E-value=5.3e-11 Score=78.98 Aligned_cols=52 Identities=42% Similarity=0.776 Sum_probs=46.4
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCC-ccceecccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDG-KEGLIPSNYIE 54 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g-~~G~vP~nyve 54 (376)
.++|+|+|.+..+++|+|.+||+|.|++. .+++||.++..+ ++||||++|++
T Consensus 1 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~-~~~~w~~~~~~~~~~G~vP~~~v~ 53 (54)
T cd00174 1 YVRALYDYDARDPDELSFKKGDIIEVLEK-SDDGWWEGRLLGGKRGLFPSNYVE 53 (54)
T ss_pred CEEEEEeeCCCCCCCCCCCCCCEEEEEEc-CCCCeEEEEECCCCEEEEccccCc
Confidence 36899999999999999999999999987 566899999654 99999999986
No 42
>KOG2199|consensus
Probab=99.15 E-value=1.8e-11 Score=108.93 Aligned_cols=57 Identities=46% Similarity=0.818 Sum_probs=54.0
Q ss_pred hhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 153 EECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 153 ~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
....++|||||++.+++||+|++||+|+|++..+.+||.|.+.+..|+||+|||...
T Consensus 214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~~~~GlFPsnfVT~~ 270 (462)
T KOG2199|consen 214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENHRGIGLFPSNFVTAD 270 (462)
T ss_pred cchhhhhhhcccccCCCccceecCcEEEEcccCCcchhccccCCcccccchhhhhhh
Confidence 346899999999999999999999999999999999999999999999999999875
No 43
>KOG1930|consensus
Probab=99.12 E-value=6.9e-11 Score=105.89 Aligned_cols=97 Identities=30% Similarity=0.424 Sum_probs=79.5
Q ss_pred ccccccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeC---------------CeeEEEEEEEcCCCc
Q psy10189 231 YIEMKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCS---------------DGVQHFKVLRDSSGK 295 (376)
Q Consensus 231 ~~~~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~---------------~~v~h~~I~~~~~~~ 295 (376)
++.-.++-||-.+|+|++|.+||+.++.|+|+||+|.+-.|.|-|.++.. .-|+||.|...++|-
T Consensus 206 FV~DTSKyWYKP~isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGV 285 (483)
T KOG1930|consen 206 FVKDTSKYWYKPNISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGV 285 (483)
T ss_pred eeecccccccCCCCCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCce
Confidence 34456778999999999999999999999999999999999999999861 348999999887773
Q ss_pred EEEe---ccccCCHHHHHHHHhhCCcCCcceeeeCCC
Q psy10189 296 FFLW---VVKFNSLNELVEYHRTASVSRSQDVKLRDM 329 (376)
Q Consensus 296 ~~~~---~~~f~sl~~lv~~y~~~~~~~~~~~~L~~p 329 (376)
-.-+ +.+|.||.+||--|.-.+|.+ .++|+.|
T Consensus 286 kLKGC~nEP~FGSLSALV~QHSIt~LAL--PckL~iP 320 (483)
T KOG1930|consen 286 KLKGCDNEPVFGSLSALVYQHSITALAL--PCKLVIP 320 (483)
T ss_pred eccCCCCCCccchhHHHHhhccchhhhc--ceeEecc
Confidence 3332 589999999998888777777 5555443
No 44
>KOG1118|consensus
Probab=99.11 E-value=2.7e-11 Score=104.25 Aligned_cols=54 Identities=35% Similarity=0.673 Sum_probs=50.2
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMK 56 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~ 56 (376)
.|.|+|||++.+++||-|++||+|.|.+. -|++||.|..+|..|+||.|||+..
T Consensus 308 ~cralYdFepenEgEL~fkeGDlI~l~~Q-IdenWyeG~~~g~sG~FPvnYv~vl 361 (366)
T KOG1118|consen 308 CCRALYDFEPENEGELDFKEGDLITLTNQ-IDENWYEGEKHGESGMFPVNYVEVL 361 (366)
T ss_pred hheeeeccCCCCCCccCcccCceeeehhh-cCcchhhheecCccCccccceeEEe
Confidence 48999999999999999999999999997 6679999999999999999999854
No 45
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.11 E-value=9.4e-11 Score=75.54 Aligned_cols=46 Identities=41% Similarity=0.967 Sum_probs=41.9
Q ss_pred hhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeec
Q psy10189 158 QALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPA 203 (376)
Q Consensus 158 ~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~ 203 (376)
+|+|+|.++.++||+|++||.+.|+++.+++||.++. +++.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 4899999999999999999999999999999999996 379999996
No 46
>KOG2070|consensus
Probab=98.99 E-value=1.7e-10 Score=105.33 Aligned_cols=55 Identities=38% Similarity=0.850 Sum_probs=52.3
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
..++|-|.|...+.+||+|.+||+|+|....++|||.|+++|++||||+|||..+
T Consensus 18 LvvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGTlng~TGWFPsnYV~ei 72 (661)
T KOG2070|consen 18 LVVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGTLNGRTGWFPSNYVREI 72 (661)
T ss_pred eEEEEEeecccCCCceeccccCCEEEEEEeccCcceeccccCccCccchHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999765
No 47
>KOG0515|consensus
Probab=98.94 E-value=4.1e-10 Score=103.90 Aligned_cols=56 Identities=36% Similarity=0.713 Sum_probs=49.4
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccC--CccceeeccCCccceeccccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMED--DMNWYRAELDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~--~~~W~~~~~~g~~G~vP~nyve~~~ 57 (376)
.+.|||||+|+.+|||+|++||.+.||++++ +..||.++.+|++||||.||+.+..
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyP 742 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYP 742 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCc
Confidence 4789999999999999999999999999833 3368888899999999999998754
No 48
>KOG1118|consensus
Probab=98.86 E-value=8.6e-10 Score=95.15 Aligned_cols=56 Identities=41% Similarity=0.917 Sum_probs=53.6
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
..+|+|+|+|++++++||.|++||+|+|++..+.+||.|...|..|+||.|||+++
T Consensus 306 ~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~~~g~sG~FPvnYv~vl 361 (366)
T KOG1118|consen 306 QPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGEKHGESGMFPVNYVEVL 361 (366)
T ss_pred chhheeeeccCCCCCCccCcccCceeeehhhcCcchhhheecCccCccccceeEEe
Confidence 36799999999999999999999999999999999999999999999999999876
No 49
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.83 E-value=4.2e-09 Score=69.67 Aligned_cols=52 Identities=44% Similarity=1.085 Sum_probs=47.3
Q ss_pred hhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCC-eeeeeecccccc
Q psy10189 157 VQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGA-RKGLFPATYILN 208 (376)
Q Consensus 157 ~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~-~~G~~P~~~v~~ 208 (376)
+.++|+|.+..+++|+|.+||.+.+++..+.+||.++..+ +.|+||.+|+++
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~ 54 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVEE 54 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCcC
Confidence 4689999999999999999999999999889999999755 999999999863
No 50
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=98.80 E-value=4.7e-09 Score=70.49 Aligned_cols=53 Identities=51% Similarity=1.155 Sum_probs=49.0
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeC-Ceeeeeecccccc
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIG-ARKGLFPATYILN 208 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~-~~~G~~P~~~v~~ 208 (376)
.++|+++|.+..+++|++.+||.+.+++....+||.++.. ++.|+||.+|++.
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~ 57 (58)
T smart00326 4 QVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEE 57 (58)
T ss_pred EEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEE
Confidence 4679999999999999999999999999988999999976 9999999999875
No 51
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=98.73 E-value=1.9e-07 Score=79.52 Aligned_cols=170 Identities=24% Similarity=0.360 Sum_probs=113.0
Q ss_pred cccccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCC-eeEEEEEEEcCCC-------cEEEeceeec
Q psy10189 54 EMKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSD-GVQHFKVLRDSSG-------KFFLWVVKFN 125 (376)
Q Consensus 54 e~~~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~-~v~h~~I~~~~~~-------~~~~~~~~f~ 125 (376)
+.+..|-|+ +++-.+|++.|.+...|..++|+|.......+++.+..+ ..+|+.|...+.. ...+.+..|.
T Consensus 34 R~I~HP~F~-n~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~ye 112 (220)
T PF14633_consen 34 RVIKHPLFK-NFNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYE 112 (220)
T ss_dssp HHHCSTTEE-SS-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEES
T ss_pred ccccCCCcc-CCCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEEC
Confidence 345566665 789999999999999999999999888888888888765 5679999864332 2455566799
Q ss_pred chhhhHhhhhcccccccccccccCCCchhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccc
Q psy10189 126 SLNELVEYHRTASVSRSQDVKLRDMVPEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATY 205 (376)
Q Consensus 126 sl~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~ 205 (376)
+|+|+|.-|-.+-.. .+..
T Consensus 113 DLDEii~r~V~pm~~---------------~v~~---------------------------------------------- 131 (220)
T PF14633_consen 113 DLDEIIARHVEPMAR---------------NVEE---------------------------------------------- 131 (220)
T ss_dssp SHHHHHHHCHHHHHH---------------HHHH----------------------------------------------
T ss_pred CHHHHHHHHHHHHHH---------------HHHH----------------------------------------------
Confidence 999988866442210 1111
Q ss_pred ccccccCcchhhhccCCCCCCccccccccccccccccccChHHHHHhhc-----CCCCCceEEeecCCCCCceEEEEEeC
Q psy10189 206 ILNMEDDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLS-----NKHEGAFLIRVSESSPGDFSLSVKCS 280 (376)
Q Consensus 206 v~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~r~~ae~~L~-----~~~~G~flvR~s~~~~~~~~ls~~~~ 280 (376)
+.....|.. -++++++++|. +..--.|.+-.+...+|.|.|++..+
T Consensus 132 ----------------------------~~~h~kf~~-g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~ 182 (220)
T PF14633_consen 132 ----------------------------MMNHRKFKD-GTKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPN 182 (220)
T ss_dssp ----------------------------HHCSTTEES-S-CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESS
T ss_pred ----------------------------HHhCccccC-CCHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcC
Confidence 112222322 24556666664 23346677777778999999999986
Q ss_pred CeeEEEE--EEEcCCCcEEEeccccCCHHHHHHHHhh
Q psy10189 281 DGVQHFK--VLRDSSGKFFLWVVKFNSLNELVEYHRT 315 (376)
Q Consensus 281 ~~v~h~~--I~~~~~~~~~~~~~~f~sl~~lv~~y~~ 315 (376)
...+|.. |...++| |.+.+..|+++.+|+.+++.
T Consensus 183 ~~~~~~~~~v~V~p~G-f~~r~~~f~~~~~L~~~FK~ 218 (220)
T PF14633_consen 183 KNPRHEYWPVKVTPDG-FRFRKQVFPSLDRLINWFKK 218 (220)
T ss_dssp TTS-EEEEEEEE-SSS-EEETTEEESSHHHHHHHHHH
T ss_pred CCCceEEeeEEEecCc-EEEecccCCCHHHHHHHHhh
Confidence 6555554 7766766 66789999999999999875
No 52
>KOG0162|consensus
Probab=98.71 E-value=9.7e-09 Score=98.29 Aligned_cols=54 Identities=35% Similarity=0.894 Sum_probs=52.1
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILN 208 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~ 208 (376)
..|.|+|+|.+++.+||+|.+||+|.++.....|||.|+.+|+.||||.+||.+
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk~~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGKLNGKEGLFPGNYVTE 1105 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhccCCcccccccccccc
Confidence 679999999999999999999999999999999999999999999999999976
No 53
>KOG2546|consensus
Probab=98.68 E-value=7.2e-09 Score=93.42 Aligned_cols=55 Identities=38% Similarity=0.719 Sum_probs=51.0
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~ 57 (376)
+++|+|||.+..++||+|.+|-+|-|+.+ ++++||++.++|-.|+||.|||+...
T Consensus 425 kVv~iydy~~~KddeLsf~E~ailyv~kk-nddgw~EgV~~~VTglFpgnyve~~~ 479 (483)
T KOG2546|consen 425 KVVAIYDYTADKDDELSFAEGAILYVLKK-NDDGWYEGVQDGVTGLFPGNYVEPLK 479 (483)
T ss_pred HHHhhcccccccccccccccccEEEEEEe-cCCcchhheecCcceeccCccccccc
Confidence 47899999999999999999999999998 77799999999999999999998654
No 54
>KOG3875|consensus
Probab=98.49 E-value=1.6e-08 Score=87.51 Aligned_cols=56 Identities=36% Similarity=0.474 Sum_probs=45.7
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccC----Cccceeec-c-CCccceecccccccccc
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMED----DMNWYRAE-L-DGKEGLIPSNYIEMKNH 58 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~----~~~W~~~~-~-~g~~G~vP~nyve~~~~ 58 (376)
|.|+|||.+.++.||||++||++.|..+++ +..||... . .+..||+|.|||+....
T Consensus 271 arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r 332 (362)
T KOG3875|consen 271 ARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR 332 (362)
T ss_pred HHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence 679999999999999999999999997632 22377665 4 56789999999996653
No 55
>KOG2856|consensus
Probab=98.34 E-value=9e-08 Score=84.77 Aligned_cols=55 Identities=38% Similarity=0.764 Sum_probs=49.2
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecC-CCcceeeeeC-Ceeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRS-DQHWWHGEIG-ARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~-~~~w~~~~~~-~~~G~~P~~~v~~~ 209 (376)
..++|||||.++..+||+|++||.+..+... ..||..|++. |++|++|+|||+.+
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~~ 471 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVECI 471 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhcCCccccccccccccCCcccccchhhhhcc
Confidence 5689999999999999999999999888764 5689999985 99999999999864
No 56
>KOG0515|consensus
Probab=98.33 E-value=1.8e-07 Score=86.76 Aligned_cols=55 Identities=33% Similarity=0.687 Sum_probs=48.8
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEecC---CCcceeeeeCCeeeeeecccccccc
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDRS---DQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~~---~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
.+.|+|||+++..+||+|.+||.++|+.+. +.+||+++++|+.|+||.||+-...
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~eGyVPRnylgLyP 742 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEEGYVPRNYLGLYP 742 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcccccchhhhhcCc
Confidence 467899999999999999999999999874 3569999999999999999986543
No 57
>KOG1930|consensus
Probab=98.32 E-value=7.8e-07 Score=80.35 Aligned_cols=90 Identities=30% Similarity=0.464 Sum_probs=72.1
Q ss_pred cccccccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeC---------------CeeEEEEEEEcCCCc
Q psy10189 52 YIEMKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCS---------------DGVQHFKVLRDSSGK 116 (376)
Q Consensus 52 yve~~~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~---------------~~v~h~~I~~~~~~~ 116 (376)
||+..+.-||..+|+|++|-++|.+...|+|+||+|.+-.|.|.|.++.. .-|+||.|.....|.
T Consensus 206 FV~DTSKyWYKP~isREQAIalLrdkePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGV 285 (483)
T KOG1930|consen 206 FVKDTSKYWYKPNISREQAIALLRDKEPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGV 285 (483)
T ss_pred eeecccccccCCCCCHHHHHHHhhcCCCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCce
Confidence 44455566999999999999999999999999999999999999988861 237999998877774
Q ss_pred EEEe---ceeecchhhhHhhhhcccccc
Q psy10189 117 FFLW---VVKFNSLNELVEYHRTASVSR 141 (376)
Q Consensus 117 ~~~~---~~~f~sl~~li~~~~~~~~~~ 141 (376)
-... +..|.||..||-.|.-.++..
T Consensus 286 kLKGC~nEP~FGSLSALV~QHSIt~LAL 313 (483)
T KOG1930|consen 286 KLKGCDNEPVFGSLSALVYQHSITALAL 313 (483)
T ss_pred eccCCCCCCccchhHHHHhhccchhhhc
Confidence 4333 234999999998776655543
No 58
>KOG2546|consensus
Probab=98.28 E-value=5.8e-07 Score=81.37 Aligned_cols=55 Identities=33% Similarity=0.701 Sum_probs=52.7
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
..+.++|||.+..++||+|.+|.+|.|+.+.+++||+|-..+.+|+||.|||+++
T Consensus 424 EkVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV~~~VTglFpgnyve~~ 478 (483)
T KOG2546|consen 424 EKVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGVQDGVTGLFPGNYVEPL 478 (483)
T ss_pred HHHHhhcccccccccccccccccEEEEEEecCCcchhheecCcceeccCcccccc
Confidence 4688999999999999999999999999999999999999999999999999986
No 59
>KOG0194|consensus
Probab=98.23 E-value=5.1e-06 Score=79.04 Aligned_cols=95 Identities=36% Similarity=0.619 Sum_probs=73.6
Q ss_pred ccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCc---e-EEEEEeC--CeeEEEEEEEcCCCcEEEeceeecchhhh
Q psy10189 57 NHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGD---F-SLSVKCS--DGVQHFKVLRDSSGKFFLWVVKFNSLNEL 130 (376)
Q Consensus 57 ~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~---~-~Ls~~~~--~~v~h~~I~~~~~~~~~~~~~~f~sl~~l 130 (376)
..+||||-+.|++++.+|.+ +|.||||.+...++. + .||+... ..++|+.|....+..++.....|.++.+|
T Consensus 48 ~~~~yHG~l~red~~~lL~~--~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~~l 125 (474)
T KOG0194|consen 48 ELPYYHGLLPREDAEKLLKN--DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTISEL 125 (474)
T ss_pred cCccccccccHhHHHHHhCC--CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHHHH
Confidence 36899999999999999987 999999999887653 3 8888885 78899999987775555555679999999
Q ss_pred Hhhhhccccccccc-ccccCCCch
Q psy10189 131 VEYHRTASVSRSQD-VKLRDMVPE 153 (376)
Q Consensus 131 i~~~~~~~~~~~~~-~~~~~~~~~ 153 (376)
+.||..+...-... ..+..|.++
T Consensus 126 i~~~~~~~~~~~~~~~~L~~PI~r 149 (474)
T KOG0194|consen 126 VNYYKFSKLEITGKNFFLKRPIPR 149 (474)
T ss_pred HHHHHhcccceeccceeecccccc
Confidence 99999876543322 234444443
No 60
>KOG3697|consensus
Probab=98.17 E-value=2.6e-06 Score=73.22 Aligned_cols=96 Identities=19% Similarity=0.238 Sum_probs=77.5
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeec-----------------------------------------------
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVS----------------------------------------------- 266 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s----------------------------------------------- 266 (376)
....+|++|.+++.++++.|.. +|.|++|.+
T Consensus 198 p~k~pp~~g~l~~~~~q~~l~~--~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~ 275 (345)
T KOG3697|consen 198 PSKMPPPGGFLDTRLKQRPLAP--DAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDE 275 (345)
T ss_pred cccCCCCCCccchhhhhccCCc--ccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhccc
Confidence 4567999999999999998864 677777643
Q ss_pred CCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeccccCCHHHHHHHHhhCCcCCc---ceeeeCCCCCc
Q psy10189 267 ESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVSRS---QDVKLRDMVPE 332 (376)
Q Consensus 267 ~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~lv~~y~~~~~~~~---~~~~L~~p~~~ 332 (376)
.+++|.|+|+=..++..||..+. ++.|-....++.|+|+..||.||..++++.- ..+.|++||.+
T Consensus 276 ~~~~gqyvltgl~~~~~khlllv-dpegvvrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r 343 (345)
T KOG3697|consen 276 TTTPGQYVLTGLQSGQPKHLLLV-DPEGVVRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVER 343 (345)
T ss_pred cCCCccEEEecccCCCcceEEEE-CCccceecccchhhHHHHHHHHhhhccCceecCcchhhhhCcccc
Confidence 34677888888888999998875 6778777778999999999999999988753 46678888754
No 61
>KOG3875|consensus
Probab=98.01 E-value=2.2e-06 Score=74.52 Aligned_cols=58 Identities=29% Similarity=0.643 Sum_probs=49.5
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecCC-----Ccceeeee--CCeeeeeeccccccccc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRSD-----QHWWHGEI--GARKGLFPATYILNMED 211 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~-----~~w~~~~~--~~~~G~~P~~~v~~~~~ 211 (376)
+..++|+|||.+.++.||+|++||.+.|..+.+ .+||..+. ++..||+|.|||+.+..
T Consensus 268 ~~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r 332 (362)
T KOG3875|consen 268 HEFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR 332 (362)
T ss_pred HHHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence 468999999999999999999999999987643 45887764 68899999999998754
No 62
>KOG3751|consensus
Probab=97.97 E-value=4.5e-06 Score=77.75 Aligned_cols=85 Identities=34% Similarity=0.592 Sum_probs=71.9
Q ss_pred cccccccccccccChHHHHHhhc--CCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcC-CCcEE--Ee--ccccC
Q psy10189 232 IEMKNHDWYYGRITRADAERLLS--NKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDS-SGKFF--LW--VVKFN 304 (376)
Q Consensus 232 ~~~~~~~w~~g~i~r~~ae~~L~--~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~-~~~~~--~~--~~~f~ 304 (376)
.-+..+.|||+.|+|+++.+++. +.-+|.|++|+|.+++..|++++....+|+||+|...+ +|..+ .+ ...|.
T Consensus 514 ~~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~s 593 (622)
T KOG3751|consen 514 AIHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFS 593 (622)
T ss_pred hhcccccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCcccc
Confidence 33678899999999999999887 35789999999999999999999999999999998754 34333 33 37999
Q ss_pred CHHHHHHHHhhC
Q psy10189 305 SLNELVEYHRTA 316 (376)
Q Consensus 305 sl~~lv~~y~~~ 316 (376)
++.+|+++|+-+
T Consensus 594 d~~ql~~~~ql~ 605 (622)
T KOG3751|consen 594 DLIQLVEFYQLN 605 (622)
T ss_pred ccccccchhhcC
Confidence 999999999877
No 63
>KOG3655|consensus
Probab=97.94 E-value=3.6e-06 Score=77.68 Aligned_cols=55 Identities=36% Similarity=0.747 Sum_probs=51.0
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee-CCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI-GARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~-~~~~G~~P~~~v~~~ 209 (376)
..+.|+|+|+|.++.|++|-.++.|++|...++|||.|.. .|..|+||+|||..+
T Consensus 428 q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li 483 (484)
T KOG3655|consen 428 QTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI 483 (484)
T ss_pred CCccccccccccCCcccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence 5688999999999999999999999999999999999986 789999999999764
No 64
>KOG1702|consensus
Probab=97.90 E-value=9.9e-06 Score=66.19 Aligned_cols=55 Identities=31% Similarity=0.582 Sum_probs=49.6
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeecccccc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILN 208 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~ 208 (376)
+..++|.|||.|++.++++|.-||.|.-....++||..|+. +|..|..|+||++-
T Consensus 207 gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~ 263 (264)
T KOG1702|consen 207 GKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF 263 (264)
T ss_pred CccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence 36899999999999999999999999988999999988875 78999999999863
No 65
>KOG2528|consensus
Probab=97.80 E-value=1.1e-05 Score=73.73 Aligned_cols=79 Identities=28% Similarity=0.397 Sum_probs=64.2
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec-cCCccceeccccccccccccccccCCHHHHHHHhcCCCCc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSNKHEG 80 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve~~~~~w~~g~isr~~ae~~l~~~~~G 80 (376)
+++|+|||.+.+..||++.+||++.+......++||.+. ..|.+|+||+.||+... ..++..++...+.+
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~---------~a~~sSs~As~p~~ 74 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR---------LAVASSSLASIPFA 74 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeec---------cccchhccCCCCCC
Confidence 578999999999999999999999999887888999999 78999999999999765 23455555556666
Q ss_pred cEEEeecCC
Q psy10189 81 AFLIRVSES 89 (376)
Q Consensus 81 ~flvR~s~~ 89 (376)
-+.+-+..+
T Consensus 75 v~sl~~p~s 83 (490)
T KOG2528|consen 75 VFSLTDPTS 83 (490)
T ss_pred cccccCccc
Confidence 666655433
No 66
>KOG3523|consensus
Probab=97.75 E-value=5e-06 Score=78.78 Aligned_cols=55 Identities=29% Similarity=0.582 Sum_probs=48.7
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec--cCCccceeccccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve~~~ 57 (376)
++.+..+|.|..+|||++..+|++.|+++ .++||++|. .+|..||||+.|++.+.
T Consensus 610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k-~~DGWl~GeRl~Dge~GWFP~~~veeI~ 666 (695)
T KOG3523|consen 610 QVQCVHSYKAKQPDELTLELADVVNVLQK-TPDGWLEGERLRDGERGWFPSSYVEEIT 666 (695)
T ss_pred hhheeeccccCCCceeeeehhhhhhhhhc-CCCccccccccccCccCcchHHHHHHhc
Confidence 35678999999999999999999999997 667999998 68999999999998543
No 67
>KOG1843|consensus
Probab=97.75 E-value=1.3e-05 Score=72.42 Aligned_cols=54 Identities=41% Similarity=0.956 Sum_probs=49.4
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCC--CcceeeeeCCeeeeeecccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSD--QHWWHGEIGARKGLFPATYILN 208 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~--~~w~~~~~~~~~G~~P~~~v~~ 208 (376)
..+.|+|+|..+...+|+|++||+|+++.+.+ ..||.++.+++.|+||.|||.+
T Consensus 417 n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~egifPanyv~~ 472 (473)
T KOG1843|consen 417 NIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYEGIFPANYVSL 472 (473)
T ss_pred ceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccccccccceecc
Confidence 37889999999999999999999999998865 5699999999999999999975
No 68
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=97.72 E-value=0.0002 Score=61.29 Aligned_cols=79 Identities=20% Similarity=0.366 Sum_probs=58.8
Q ss_pred cccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeC-CeeEEEEEEEcCCC-------cEEEeccccCCHH
Q psy10189 236 NHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCS-DGVQHFKVLRDSSG-------KFFLWVVKFNSLN 307 (376)
Q Consensus 236 ~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~-~~v~h~~I~~~~~~-------~~~~~~~~f~sl~ 307 (376)
..|-|+ +++-.+|++.|.....|.++||+|+......+++++.. +-..|+.|...+.. .+.+++..|.+|.
T Consensus 37 ~HP~F~-n~~~~qAe~~L~~~~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLD 115 (220)
T PF14633_consen 37 KHPLFK-NFNYKQAEEYLADQDVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLD 115 (220)
T ss_dssp CSTTEE-SS-HHHHHHHHCCS-TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHH
T ss_pred cCCCcc-CCCHHHHHHHHhcCCCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEECCHH
Confidence 345555 89999999999998899999999966566789999974 55579888764321 3667789999999
Q ss_pred HHHHHHhh
Q psy10189 308 ELVEYHRT 315 (376)
Q Consensus 308 ~lv~~y~~ 315 (376)
|||..|-.
T Consensus 116 Eii~r~V~ 123 (220)
T PF14633_consen 116 EIIARHVE 123 (220)
T ss_dssp HHHHHCHH
T ss_pred HHHHHHHH
Confidence 99998744
No 69
>KOG1856|consensus
Probab=97.71 E-value=0.00038 Score=71.06 Aligned_cols=164 Identities=27% Similarity=0.423 Sum_probs=116.0
Q ss_pred cCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCCee-EEEEEEEcCCCc-------EEEeceeecchhhhHhhhh
Q psy10189 64 RITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGV-QHFKVLRDSSGK-------FFLWVVKFNSLNELVEYHR 135 (376)
Q Consensus 64 ~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v-~h~~I~~~~~~~-------~~~~~~~f~sl~~li~~~~ 135 (376)
+++-++|+..|.....|-+++|+|.......++..+..+.+ +|+.|.....-. ..+.+..|..|.++|.-|-
T Consensus 1113 n~n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEiI~r~v 1192 (1299)
T KOG1856|consen 1113 NLNAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEIIARYV 1192 (1299)
T ss_pred CCCHHHHHHHHHhcccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHHHHHHH
Confidence 46788999999999999999999988777778887776655 677776433222 2334455888888887664
Q ss_pred cccccccccccccCCCchhhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccccCcch
Q psy10189 136 TASVSRSQDVKLRDMVPEECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMEDDMNW 215 (376)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~~~~~ 215 (376)
.+-.. .+
T Consensus 1193 qpm~~------------------~~------------------------------------------------------- 1199 (1299)
T KOG1856|consen 1193 QPMAT------------------NL------------------------------------------------------- 1199 (1299)
T ss_pred HHHHH------------------HH-------------------------------------------------------
Confidence 32110 00
Q ss_pred hhhccCCCCCCccccccccccccccccccChHHHHHhhc--CCCC---CceEEeecCCCCCceEEEEEeCCeeEEEEEEE
Q psy10189 216 YRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLS--NKHE---GAFLIRVSESSPGDFSLSVKCSDGVQHFKVLR 290 (376)
Q Consensus 216 ~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~r~~ae~~L~--~~~~---G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~ 290 (376)
..+....+|.+ =++++.+.+|. .+.+ -.|.+..|...+|.|.||++.+++++|--+..
T Consensus 1200 ----------------~em~nhkyf~~-Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v 1262 (1299)
T KOG1856|consen 1200 ----------------REMTNHKYFFT-GTKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKV 1262 (1299)
T ss_pred ----------------HHHHhhhHhhc-CCHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEE
Confidence 00233344542 25888899886 2223 34555577788999999999999999988877
Q ss_pred cCCCcEEEeccccCCHHHHHHHHhhCCc
Q psy10189 291 DSSGKFFLWVVKFNSLNELVEYHRTASV 318 (376)
Q Consensus 291 ~~~~~~~~~~~~f~sl~~lv~~y~~~~~ 318 (376)
.+.| |+..++.|+|+.+|..+++.+-.
T Consensus 1263 ~p~g-~~~rg~~f~tld~L~~~FK~h~~ 1289 (1299)
T KOG1856|consen 1263 VPEG-FRFRGQNFGTLDELCRWFKRHYK 1289 (1299)
T ss_pred cccc-eEEecccchhHHHHHHHHHHHhc
Confidence 7765 77788999999999999877543
No 70
>KOG3557|consensus
Probab=97.70 E-value=1.1e-05 Score=77.06 Aligned_cols=54 Identities=31% Similarity=0.607 Sum_probs=47.6
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec-cCCccceeccccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve~~~ 57 (376)
.++.+|||.|++..||++.+||+++|+. ++..||.++ ..|+.||||+|-+....
T Consensus 502 ~~~~~Ydf~arNs~ELsV~k~E~LEvl~--d~R~WW~~kn~~G~~GyvP~nIL~~~~ 556 (721)
T KOG3557|consen 502 WVLVLYDFQARNSSELSVKKGEVLEVLD--DGRKWWKVKNGHGRAGYVPSNILAPLQ 556 (721)
T ss_pred eeeeehhhhcccchhhhhhhhhhhhhhh--ccccceeccCccCCCCCcchhhhccCC
Confidence 3678999999999999999999999997 566899998 67999999999987554
No 71
>KOG2222|consensus
Probab=97.66 E-value=7.8e-06 Score=75.31 Aligned_cols=55 Identities=35% Similarity=0.685 Sum_probs=49.0
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccccc
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNH 58 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~ 58 (376)
+.||.||...+++||-|+++|+|.++.. .++.-|.|..||-+||||+.||++.++
T Consensus 551 akal~df~r~dddelgfrkndiitiise-kdehcwvgelnglrgwfpakfvellde 605 (848)
T KOG2222|consen 551 AKALHDFAREDDDELGFRKNDIITIISE-KDEHCWVGELNGLRGWFPAKFVELLDE 605 (848)
T ss_pred HHHHhhhhhccccccccccccEEEEeec-CCcceeeeccccccccchHHHHHHHHh
Confidence 5689999999999999999999999987 555778899999999999999997543
No 72
>KOG3771|consensus
Probab=97.41 E-value=8.1e-05 Score=69.08 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=45.8
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEM 55 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~ 55 (376)
.+.|+|+|.+++.+||+|..||+|.|+..++.+.||.|...|..+-.|.+|+.+
T Consensus 402 ~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~~~~~~~ 455 (460)
T KOG3771|consen 402 KVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDWNGLFPL 455 (460)
T ss_pred ceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhcccccccceec
Confidence 478999999999999999999999999987778899999887766655666543
No 73
>KOG3632|consensus
Probab=97.40 E-value=7.8e-05 Score=74.46 Aligned_cols=54 Identities=35% Similarity=0.760 Sum_probs=48.2
Q ss_pred EEEeecCCCC-------CCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccc
Q psy10189 3 AIAKHDFNAT-------AEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMK 56 (376)
Q Consensus 3 ~~al~~y~~~-------~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~ 56 (376)
.+|.+||+++ .+.||.|+.||+|.|+.+.+++++++|..+|+.|+||+||++-.
T Consensus 1247 mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqkglvpsnfle~p 1307 (1335)
T KOG3632|consen 1247 MVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQKGLVPSNFLEAP 1307 (1335)
T ss_pred hhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCccCccccccccCC
Confidence 5789999983 45689999999999999889999999999999999999999743
No 74
>KOG4773|consensus
Probab=97.34 E-value=5.3e-05 Score=67.27 Aligned_cols=58 Identities=24% Similarity=0.504 Sum_probs=54.1
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccccC
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMEDD 212 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~~ 212 (376)
.++.|+.+|......||.+.+|+++.++.+.+.+||.|+.++..||+|..|+.+++..
T Consensus 176 q~~~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk~R~~~g~yp~sF~~~ld~f 233 (386)
T KOG4773|consen 176 QRAEASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGKVRGLTGYYPDSFVKQLDDF 233 (386)
T ss_pred HHHHhhccCCCCccceeeeehhhHHHHHhhcccceeeeeeccccccccHHhhhhhccC
Confidence 5678999999999999999999999999999999999999999999999999998653
No 75
>KOG4773|consensus
Probab=97.27 E-value=2.6e-05 Score=69.17 Aligned_cols=53 Identities=25% Similarity=0.443 Sum_probs=48.5
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccc
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMK 56 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~ 56 (376)
+.|++||......||.|++||++.++.+ ++.+||.|...|..||+|..|++..
T Consensus 178 ~~a~~df~gns~~EL~l~agdV~~~~~r-~ek~W~~gk~R~~~g~yp~sF~~~l 230 (386)
T KOG4773|consen 178 AEASFDFPGNSKLELNLVAGDVEFLLSR-DEKYWLLGKVRGLTGYYPDSFVKQL 230 (386)
T ss_pred HHhhccCCCCccceeeeehhhHHHHHhh-cccceeeeeeccccccccHHhhhhh
Confidence 4678999999999999999999999997 7779999999999999999998743
No 76
>KOG0609|consensus
Probab=97.24 E-value=0.00011 Score=69.19 Aligned_cols=52 Identities=35% Similarity=0.667 Sum_probs=42.9
Q ss_pred EEEEeecCCCCCCC-------CccccCCCEEEEEeccCCccceeeccC-----Cccceecccccc
Q psy10189 2 EAIAKHDFNATAED-------ELSFRKSQVLKILNMEDDMNWYRAELD-----GKEGLIPSNYIE 54 (376)
Q Consensus 2 ~~~al~~y~~~~~~-------eLsf~~Gd~i~v~~~~~~~~W~~~~~~-----g~~G~vP~nyve 54 (376)
.+.|+|||++..++ -|+|.+||++.|+++ +|.+||+++.. +..|++|+..++
T Consensus 216 ~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~q-dD~nWWQA~~~~~~~~~~AGLiPS~~~q 279 (542)
T KOG0609|consen 216 FVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQ-DDPNWWQARRVGDPFGGLAGLIPSKELQ 279 (542)
T ss_pred eehhhcCcCcccCCcccchhcCCcccccceeeeccC-CCcchhhhhcccCccccccccccCHHHH
Confidence 47899999985554 479999999999998 77899999843 456999998876
No 77
>KOG4575|consensus
Probab=97.20 E-value=0.00035 Score=66.77 Aligned_cols=52 Identities=21% Similarity=0.477 Sum_probs=43.7
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeecc--CCccceecccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAEL--DGKEGLIPSNYIE 54 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~vP~nyve 54 (376)
.++|+|.+.++.+++|-|-+||+|++..- .+.+||...+ ....|+||+|||-
T Consensus 10 ~vrA~y~w~ge~eGdl~f~egDlie~trI-~dgkwwi~lhrNk~~~g~fpsNFvh 63 (874)
T KOG4575|consen 10 MVRALYAWPGEREGDLKFTEGDLIEQTRI-EDGKWWILLHRNKDEDGLFPSNFVH 63 (874)
T ss_pred eEEeeccCCCCcccccceecccceeEEee-ccceeeeeeeecccccccCccccee
Confidence 57899999999999999999999999985 5556666653 4567999999983
No 78
>KOG2222|consensus
Probab=97.11 E-value=0.00019 Score=66.43 Aligned_cols=56 Identities=36% Similarity=0.740 Sum_probs=53.0
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeecccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNME 210 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~ 210 (376)
.+++||.||.-.+++||.|++.|++++++..+..-|.|..+|-.||||+.||+.++
T Consensus 549 krakal~df~r~dddelgfrkndiitiisekdehcwvgelnglrgwfpakfvelld 604 (848)
T KOG2222|consen 549 KRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGELNGLRGWFPAKFVELLD 604 (848)
T ss_pred HHHHHHhhhhhccccccccccccEEEEeecCCcceeeeccccccccchHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999998765
No 79
>KOG3523|consensus
Probab=97.05 E-value=0.00012 Score=69.73 Aligned_cols=57 Identities=26% Similarity=0.637 Sum_probs=51.5
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeecccccccccC
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILNMEDD 212 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~~~~~ 212 (376)
++.+...|.+..+++|++..+|++.|+.+..+||..|.. .|..||||..|++.+..+
T Consensus 610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~ 668 (695)
T KOG3523|consen 610 QVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP 668 (695)
T ss_pred hhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence 466778899999999999999999999999999999974 789999999999998654
No 80
>KOG3751|consensus
Probab=96.67 E-value=0.0012 Score=61.97 Aligned_cols=81 Identities=35% Similarity=0.646 Sum_probs=66.6
Q ss_pred ccccccccCCHHHHHHHhcC--CCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEc-CCCcEEEec----eeecchhh
Q psy10189 57 NHDWYYGRITRADAERLLSN--KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRD-SSGKFFLWV----VKFNSLNE 129 (376)
Q Consensus 57 ~~~w~~g~isr~~ae~~l~~--~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~-~~~~~~~~~----~~f~sl~~ 129 (376)
...|+|+.|+++++..++.. ..+|.|++|+|.++|..+++++....+++|+.|... ..|..+++. .+|.++..
T Consensus 518 sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~sd~~q 597 (622)
T KOG3751|consen 518 SQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFSDLIQ 597 (622)
T ss_pred cccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCcccccccc
Confidence 46799999999999998877 689999999999999999999999999999999863 444444332 23888888
Q ss_pred hHhhhhcc
Q psy10189 130 LVEYHRTA 137 (376)
Q Consensus 130 li~~~~~~ 137 (376)
++++|+-+
T Consensus 598 l~~~~ql~ 605 (622)
T KOG3751|consen 598 LVEFYQLN 605 (622)
T ss_pred ccchhhcC
Confidence 88888765
No 81
>KOG3557|consensus
Probab=96.51 E-value=0.00071 Score=65.06 Aligned_cols=57 Identities=28% Similarity=0.661 Sum_probs=49.4
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee-CCeeeeeecccccccccC
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI-GARKGLFPATYILNMEDD 212 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~-~~~~G~~P~~~v~~~~~~ 212 (376)
..+..+|||.++...||++.+|+++.|+... ..||.++. .|+.|+||.|.+.++..+
T Consensus 501 k~~~~~Ydf~arNs~ELsV~k~E~LEvl~d~-R~WW~~kn~~G~~GyvP~nIL~~~~~~ 558 (721)
T KOG3557|consen 501 KWVLVLYDFQARNSSELSVKKGEVLEVLDDG-RKWWKVKNGHGRAGYVPSNILAPLQPE 558 (721)
T ss_pred eeeeeehhhhcccchhhhhhhhhhhhhhhcc-ccceeccCccCCCCCcchhhhccCCCc
Confidence 4678899999999999999999999998644 67999886 799999999999887543
No 82
>KOG4429|consensus
Probab=96.45 E-value=0.0025 Score=55.39 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=51.0
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
..|.++|.|+++.+++|....|+++.+.++...+||.|++.|..|-||+.+++..
T Consensus 364 ~lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~rl~gd~~hf~Aa~iEea 418 (421)
T KOG4429|consen 364 ILCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCRLLGDFEHFHAAEIEEA 418 (421)
T ss_pred HHhhhhhccccccccccCCcccceeeecCcccCCCceeeeccccCCCcHHHHHHh
Confidence 5689999999999999999999999998999999999999999999999998754
No 83
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=96.40 E-value=0.0033 Score=41.34 Aligned_cols=37 Identities=32% Similarity=0.721 Sum_probs=30.2
Q ss_pred cccCCCEEEEEeccCCccceee-ccCCccceecccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRA-ELDGKEGLIPSNYIE 54 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~-~~~g~~G~vP~nyve 54 (376)
.+..|+.|.|+....+.+|+++ ..+|.+|||+++||+
T Consensus 18 ~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 18 QLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS 55 (55)
T ss_dssp EEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred EEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence 6789999999987454449999 578999999999974
No 84
>KOG4566|consensus
Probab=96.35 E-value=0.0063 Score=53.22 Aligned_cols=83 Identities=27% Similarity=0.440 Sum_probs=66.8
Q ss_pred cccccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEe-------c-cccCC
Q psy10189 234 MKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLW-------V-VKFNS 305 (376)
Q Consensus 234 ~~~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~-------~-~~f~s 305 (376)
+...+||+|.+++.+|+..|...+.|+|+||+|...+-.+.|+++....-+..+|...+ +.+..+ . ..|++
T Consensus 49 ~~~~g~~w~~~~~~~~~~~l~~~p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~-~sfr~ds~~~~~~pl~~~e~ 127 (258)
T KOG4566|consen 49 LDSSGHYWGLETANEAELCLGQEPRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQD-SSFRLDSSHRHTPPLISFED 127 (258)
T ss_pred cccCCcccccccchhHHHhhcCCCccceeeecCcCccccceeEeeeccCCCCccccccc-cceecccccccCCCcccChh
Confidence 45668999999999999889888999999999987777799999987777777776544 555442 2 48999
Q ss_pred HHHHHHHHhhCC
Q psy10189 306 LNELVEYHRTAS 317 (376)
Q Consensus 306 l~~lv~~y~~~~ 317 (376)
+..++++|....
T Consensus 128 ~~~~~~~y~~~~ 139 (258)
T KOG4566|consen 128 VEVLIHHYRQSR 139 (258)
T ss_pred HHHHHHhhhhhh
Confidence 999999995543
No 85
>KOG0609|consensus
Probab=96.24 E-value=0.0083 Score=57.02 Aligned_cols=54 Identities=31% Similarity=0.788 Sum_probs=45.7
Q ss_pred hhhhhcccCCCCCC-------CceeccCCCEEEEEecCCCcceeeeeC-----Ceeeeeecccccc
Q psy10189 155 CLVQALYDFTPQEP-------GELEFRRGDVITVTDRSDQHWWHGEIG-----ARKGLFPATYILN 208 (376)
Q Consensus 155 ~~~~al~~~~~~~~-------~eL~~~~g~~i~v~~~~~~~w~~~~~~-----~~~G~~P~~~v~~ 208 (376)
..++|++||.+..+ ..|.|++||++.|+++.|..||.++.. +..|++|+..+..
T Consensus 215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qe 280 (542)
T KOG0609|consen 215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQE 280 (542)
T ss_pred eeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHH
Confidence 56889999998765 469999999999999999999999853 5689999987654
No 86
>KOG3565|consensus
Probab=96.23 E-value=0.0014 Score=64.98 Aligned_cols=55 Identities=20% Similarity=0.562 Sum_probs=51.1
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec--cCCccceecccccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYIEMK 56 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve~~ 56 (376)
.+.|+|.|++++++++++.+|+++.|++.+.+++|=.++ .++..|+||.+||+..
T Consensus 580 ~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~ 636 (640)
T KOG3565|consen 580 TSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVT 636 (640)
T ss_pred ceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccc
Confidence 578999999999999999999999999988888999999 7899999999999854
No 87
>KOG3775|consensus
Probab=96.08 E-value=0.0052 Score=55.39 Aligned_cols=61 Identities=31% Similarity=0.658 Sum_probs=53.7
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeecccccccccCcc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILNMEDDMN 214 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~~~~~~~ 214 (376)
..+-++++.|.++.++||.+..||-+.|-...++-|..|.+ +|+.|+||+.|+..++.+..
T Consensus 262 e~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ee 324 (482)
T KOG3775|consen 262 EQTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEE 324 (482)
T ss_pred chhhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCchh
Confidence 35678999999999999999999999998888899999975 79999999999998876543
No 88
>KOG1451|consensus
Probab=95.91 E-value=0.0062 Score=58.16 Aligned_cols=55 Identities=27% Similarity=0.615 Sum_probs=47.9
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEE-ecCCCcceeeeeCCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVT-DRSDQHWWHGEIGARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~-~~~~~~w~~~~~~~~~G~~P~~~v~~~ 209 (376)
..+.++|.-.+....+++|..|.++.-. ....+||..|+++|+.|++|.|||+++
T Consensus 757 rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtLnGktglip~nyve~l 812 (812)
T KOG1451|consen 757 RRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGTLNGKTGLIPSNYVEPL 812 (812)
T ss_pred ccccceeccCCCCcccccccCcceeeeecccCCCCceeeecCCCcccCcccccCcC
Confidence 4577888889999999999999988755 467889999999999999999999873
No 89
>KOG2528|consensus
Probab=95.86 E-value=0.0045 Score=57.16 Aligned_cols=55 Identities=31% Similarity=0.647 Sum_probs=48.5
Q ss_pred hhhhcccCCCCCCCceeccCCCEEEEEec-CCCcceeeee-CCeeeeeecccccccc
Q psy10189 156 LVQALYDFTPQEPGELEFRRGDVITVTDR-SDQHWWHGEI-GARKGLFPATYILNME 210 (376)
Q Consensus 156 ~~~al~~~~~~~~~eL~~~~g~~i~v~~~-~~~~w~~~~~-~~~~G~~P~~~v~~~~ 210 (376)
..+++|||......++++..|+++.+... ..++||.|.. +|..|+||++||+...
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~ 60 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTR 60 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeec
Confidence 47899999999999999999999999865 5678999985 8999999999998653
No 90
>KOG3771|consensus
Probab=95.76 E-value=0.0062 Score=56.90 Aligned_cols=53 Identities=28% Similarity=0.246 Sum_probs=42.7
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecC-CCcceeeeeCCeeeeeecccc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRS-DQHWWHGEIGARKGLFPATYI 206 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~-~~~w~~~~~~~~~G~~P~~~v 206 (376)
...+.++|+|.+++.++|+|..||+|.|+... ...||.|.+.|..+-+|.+|+
T Consensus 400 ~~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~~~~~~ 453 (460)
T KOG3771|consen 400 LYKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESDWNGLF 453 (460)
T ss_pred ccceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhcccccccce
Confidence 35788999999999999999999999999754 456999988776665554444
No 91
>KOG4575|consensus
Probab=95.76 E-value=0.0068 Score=58.30 Aligned_cols=55 Identities=35% Similarity=0.780 Sum_probs=47.1
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeeccccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILNM 209 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~~ 209 (376)
..++|+|.+.++..++|-|.+||+++++.-.++.||-+.. .+..|+||+|||..+
T Consensus 9 ~~vrA~y~w~ge~eGdl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhcL 65 (874)
T KOG4575|consen 9 CMVRALYAWPGEREGDLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHCL 65 (874)
T ss_pred ceEEeeccCCCCcccccceecccceeEEeeccceeeeeeeecccccccCcccceeec
Confidence 4688999999999999999999999999887777777765 467899999999554
No 92
>KOG3508|consensus
Probab=95.63 E-value=0.00057 Score=68.95 Aligned_cols=240 Identities=19% Similarity=0.232 Sum_probs=137.8
Q ss_pred cccccccccCCHHHHHHHhcC-CCCccEEEeecCCCCCceEEEEEeC-CeeEEEEEEEcCCCcEEEeceeecchhhhHhh
Q psy10189 56 KNHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCS-DGVQHFKVLRDSSGKFFLWVVKFNSLNELVEY 133 (376)
Q Consensus 56 ~~~~w~~g~isr~~ae~~l~~-~~~G~flvR~s~~~~~~~~Ls~~~~-~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~ 133 (376)
....||+++..|.-++..+.. ...+.++++++..-++.+.++..-. +.+.|.++...-...-.+.+..|. +
T Consensus 79 p~~~~~~~~lrr~i~e~r~r~~e~s~~~wi~e~~~lp~~~~l~~~~~~d~~l~~r~~s~~~~s~vl~gE~~~-------f 151 (932)
T KOG3508|consen 79 PERKWYMENLRRTIAESRLRRAENSGSYWIREAKRLPGKGKLSCLLQLDGTLYARTISKCGTSNVLWGENFL-------F 151 (932)
T ss_pred chhhhhhcchhhhcccchhhccCCceeEEeeccCcCCCcceeehhhccchhHHhhhhhhcccchhccccccc-------c
Confidence 345699999999988888666 7788889999988888877754432 234454443211111111111100 0
Q ss_pred hhcccccccccccccCCCchhhhhhhcccCCCC-CCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeecccccccc
Q psy10189 134 HRTASVSRSQDVKLRDMVPEECLVQALYDFTPQ-EPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILNME 210 (376)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~~~ 210 (376)
+ ..++.+.-....++++-.+... +.+++.+.+|+...+-....++|..+.. .+..|.+
T Consensus 152 ~----------~lPpl~~~~~~~~~~i~~~~k~~~n~~l~~~~~~~f~~~~~~~d~w~~v~t~~~~e~~~i--------- 212 (932)
T KOG3508|consen 152 P----------VLPPLPVVDVLRVRAILPKKKKPTNDEIGFVKGDEFPVHRDLEDGWYWVTTSRTDEGGSI--------- 212 (932)
T ss_pred c----------cCCccchhhhhhhhhhhhhhccCcccccccccchhheecccccceeEEeeccccccCCcc---------
Confidence 0 0011111112334444444443 3468999998877666666777865542 1211111
Q ss_pred cCcchhhhccCCCCCCccccccccccccccccccChHHHHHhhcC-CCCCceEEeecCCCCCceEEEEEeCCeeEEEEEE
Q psy10189 211 DDMNWYRAELDGKEGLIPSNYIEMKNHDWYYGRITRADAERLLSN-KHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVL 289 (376)
Q Consensus 211 ~~~~~~~~~~~~~~g~~p~~~~~~~~~~w~~g~i~r~~ae~~L~~-~~~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~ 289 (376)
.+...|..+..|.. .....|+|.+|.-.+|...|.. ...+.|++|.+...++.|.+-..-...+.|+.|.
T Consensus 213 ------~~s~~~~~~~~~~~---~~~ar~q~i~i~~~e~y~~~~e~~~~~y~~lc~~lnp~l~~~~kEe~a~aLvr~l~s 283 (932)
T KOG3508|consen 213 ------IASLVGGKSESPDP---RIKARWQSINILPMEAYDELAETGTYNYFLLCPVLNPPLDVSLKEELANALVRVLIS 283 (932)
T ss_pred ------cccccccccCCCCc---cccccccccccCchHHHHHHHHHhccceeeeecccCCCcchhHHHHHHHHHHHHHHh
Confidence 11112222222222 4567999999999999998875 3456899998865555554433335566777776
Q ss_pred EcCCCcEEEeccccCCHHH-HHHHHhhCCcCCcceeeeCCCCCc
Q psy10189 290 RDSSGKFFLWVVKFNSLNE-LVEYHRTASVSRSQDVKLRDMVPE 332 (376)
Q Consensus 290 ~~~~~~~~~~~~~f~sl~~-lv~~y~~~~~~~~~~~~L~~p~~~ 332 (376)
......|+.+...+..+.. -++||..+.... .+++..|+.+
T Consensus 284 ~~~ak~fl~Dl~~~e~~r~~~idhlifrentl--atka~ep~mk 325 (932)
T KOG3508|consen 284 TGRAKQFLMDLRMKEVLRLGDIDHLIFRENTL--ATKAIEPYMK 325 (932)
T ss_pred cchHHHHhhcchhHhhhhccchhhhhhhhhhh--hhhhhhHHHH
Confidence 5544466666777777766 678887765544 4455555543
No 93
>KOG3697|consensus
Probab=95.41 E-value=0.026 Score=49.21 Aligned_cols=82 Identities=20% Similarity=0.268 Sum_probs=62.0
Q ss_pred cccccccccCCHHHHHHHhcCCCCccEEEee-----------------------------------------------cC
Q psy10189 56 KNHDWYYGRITRADAERLLSNKHEGAFLIRV-----------------------------------------------SE 88 (376)
Q Consensus 56 ~~~~w~~g~isr~~ae~~l~~~~~G~flvR~-----------------------------------------------s~ 88 (376)
...+|++|.+++..++..|.. ++.|+++. ..
T Consensus 199 ~k~pp~~g~l~~~~~q~~l~~--~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~~ 276 (345)
T KOG3697|consen 199 SKMPPPGGFLDTRLKQRPLAP--DAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDET 276 (345)
T ss_pred ccCCCCCCccchhhhhccCCc--ccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhcccc
Confidence 457899999999999887753 33333332 23
Q ss_pred CCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeceeecchhhhHhhhhccccc
Q psy10189 89 SSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTASVS 140 (376)
Q Consensus 89 ~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~li~~~~~~~~~ 140 (376)
+.+|.|+|.-..++..+|..+. +++|...-.+..|+|+..||+|+..+.+.
T Consensus 277 ~~~gqyvltgl~~~~~khlllv-dpegvvrtkd~~fdsishli~yh~~~~lp 327 (345)
T KOG3697|consen 277 TTPGQYVLTGLQSGQPKHLLLV-DPEGVVRTKDRRFDSISHLINYHMDNHLP 327 (345)
T ss_pred CCCccEEEecccCCCcceEEEE-CCccceecccchhhHHHHHHHHhhhccCc
Confidence 5578899999999999998876 56676666566699999999999987654
No 94
>KOG3725|consensus
Probab=95.13 E-value=0.0063 Score=52.01 Aligned_cols=54 Identities=33% Similarity=0.557 Sum_probs=48.0
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEec--CCCcceeeeeCCeeeeeecccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDR--SDQHWWHGEIGARKGLFPATYILN 208 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~--~~~~w~~~~~~~~~G~~P~~~v~~ 208 (376)
..++++|||.+..+.||++...++|+|.+- .+.+|..|..+++.|-+|..|++.
T Consensus 318 rkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkkGKvPvtYlEL 373 (375)
T KOG3725|consen 318 RKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKKGKVPVTYLEL 373 (375)
T ss_pred cceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCCCCcchhHHHh
Confidence 467889999999999999999999999875 467799999999999999998864
No 95
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=95.10 E-value=0.021 Score=40.52 Aligned_cols=42 Identities=17% Similarity=0.317 Sum_probs=26.9
Q ss_pred CCCCccccCCCEEEEEeccCCccceeec-cCCccceeccccccc
Q psy10189 13 AEDELSFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIEM 55 (376)
Q Consensus 13 ~~~eLsf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve~ 55 (376)
+..+|.+++|+.++||+..+ .+-|.++ ..|+-||||.+++-.
T Consensus 29 G~kDLpi~~GE~LeVI~~t~-~~kvlCRN~~GKYGYV~~~~L~~ 71 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTD-DNKVLCRNSEGKYGYVLRSHLLP 71 (89)
T ss_dssp -TTB----TT-B-EEEEESS-SSEEEEEETTTEEEEEEGGGS--
T ss_pred CcccCCcCCCCEEEEEEeCC-CCeEEEeCCCCceeEEEHHHccC
Confidence 45689999999999999745 4555555 889999999999843
No 96
>PRK10884 SH3 domain-containing protein; Provisional
Probab=95.06 E-value=0.02 Score=48.79 Aligned_cols=38 Identities=13% Similarity=0.370 Sum_probs=33.2
Q ss_pred cccCCCEEEEEeccCCccceeec-cCCccceeccccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIEM 55 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve~ 55 (376)
++..|+.|.|++..++.+|.+++ .+|++|||++.|+..
T Consensus 49 ~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~ 87 (206)
T PRK10884 49 TLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLST 87 (206)
T ss_pred EEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcC
Confidence 78899999999975656899998 689999999999864
No 97
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=94.55 E-value=0.046 Score=36.88 Aligned_cols=36 Identities=22% Similarity=0.659 Sum_probs=29.3
Q ss_pred cccCCCEEEEEeccCCccceeecc-CCccceecccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAEL-DGKEGLIPSNYIE 54 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~vP~nyve 54 (376)
.+.+|+.+.++.. .+++|+.++. +|..||+|..++.
T Consensus 26 ~l~~g~~v~i~~~-~~~~W~~v~~~~g~~Gwi~~~~~~ 62 (63)
T smart00287 26 TLKKGDKVKVLGV-DGQDWAKITYGSGQRGYVPGYVVN 62 (63)
T ss_pred EecCCCEEEEEEc-cCCceEEEEcCCCCEEEEEeeeec
Confidence 5789999999986 3337999996 4999999887764
No 98
>KOG3775|consensus
Probab=94.52 E-value=0.022 Score=51.54 Aligned_cols=50 Identities=22% Similarity=0.384 Sum_probs=43.3
Q ss_pred EEeecCCCCCCCCccccCCCEEEEEeccCCccceeec--cCCccceecccccc
Q psy10189 4 IAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYIE 54 (376)
Q Consensus 4 ~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve 54 (376)
+|++.|.++-++||-+.-||-|-|-.. .++-|.++- .+|++|.||+.|+-
T Consensus 266 R~~~rFvPRHpDELeLEIgDav~Ve~e-adD~W~~G~NlRTG~~GIFPA~ya~ 317 (482)
T KOG3775|consen 266 RAVFRFVPRHPDELELEIGDAVLVEAE-ADDFWFEGFNLRTGERGIFPAFYAH 317 (482)
T ss_pred hhhhhccCCCcceeeeecCCeeEeeec-ccchhhccccccccccccccceeEE
Confidence 578899999999999999999977654 667888887 58999999999964
No 99
>KOG0199|consensus
Probab=94.33 E-value=0.045 Score=54.20 Aligned_cols=52 Identities=13% Similarity=0.263 Sum_probs=43.7
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec--cCCccceecccccc
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYIE 54 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve 54 (376)
++|..+|+....+-|-|.+||.|.||+.....-||++. .+++.|.||.+-|-
T Consensus 377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 377 AVARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred ceeeeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 45666777888999999999999999986666799996 58899999988764
No 100
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=93.62 E-value=0.098 Score=37.19 Aligned_cols=45 Identities=13% Similarity=0.238 Sum_probs=29.9
Q ss_pred CCCceeccCCCEEEEEecCCCcceeeee-CCeeeeeeccccccccc
Q psy10189 167 EPGELEFRRGDVITVTDRSDQHWWHGEI-GARKGLFPATYILNMED 211 (376)
Q Consensus 167 ~~~eL~~~~g~~i~v~~~~~~~w~~~~~-~~~~G~~P~~~v~~~~~ 211 (376)
...+|.+++|+.+.|+...+++=|.|+. .|+-|+||.+++.+.+.
T Consensus 29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d~ 74 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLDG 74 (89)
T ss_dssp -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS-----
T ss_pred CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCCC
Confidence 3568999999999999999999888886 79999999999977643
No 101
>KOG1856|consensus
Probab=93.26 E-value=0.14 Score=53.27 Aligned_cols=80 Identities=24% Similarity=0.405 Sum_probs=59.9
Q ss_pred cccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCee-EEEEEEEcCC-C------cEEEeccccCCHH
Q psy10189 236 NHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGV-QHFKVLRDSS-G------KFFLWVVKFNSLN 307 (376)
Q Consensus 236 ~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v-~h~~I~~~~~-~------~~~~~~~~f~sl~ 307 (376)
..|.| .+++-++|+.+|.....|.++||+|+......+++++....| .|+.|....+ + .+.+++..|..|.
T Consensus 1107 ~HP~F-~n~n~eQAe~yL~~~d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLD 1185 (1299)
T KOG1856|consen 1107 AHPLF-KNLNAEQAEAYLSDMDQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLD 1185 (1299)
T ss_pred cCccc-cCCCHHHHHHHHHhcccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHH
Confidence 34554 468999999999988899999999977667788999886665 5666653222 2 2344578999999
Q ss_pred HHHHHHhhC
Q psy10189 308 ELVEYHRTA 316 (376)
Q Consensus 308 ~lv~~y~~~ 316 (376)
++|.-|-.+
T Consensus 1186 EiI~r~vqp 1194 (1299)
T KOG1856|consen 1186 EIIARYVQP 1194 (1299)
T ss_pred HHHHHHHHH
Confidence 999987553
No 102
>KOG0040|consensus
Probab=93.02 E-value=0.0056 Score=64.32 Aligned_cols=58 Identities=33% Similarity=0.800 Sum_probs=53.9
Q ss_pred hhhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccccc
Q psy10189 154 ECLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMED 211 (376)
Q Consensus 154 ~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~ 211 (376)
..++.|+|+|...++.+.++++||+++++......||.++++.+.|++|+.||+.+..
T Consensus 968 ~~~v~alyd~q~kSprev~mKkgDvltll~s~nkdwwkve~~d~qg~vpa~yvk~~~~ 1025 (2399)
T KOG0040|consen 968 KECVLALYDYQEKSPREVTMKKGDVLTLLNSINKDWWKVEVNDRQGFVPAAYVKRLDP 1025 (2399)
T ss_pred HHHHHHHHHHHhcCHHHHHHhhhhHHHHHhhcccccccchhhhhcCcchHHHHHHhcc
Confidence 3678899999999999999999999999999999999999999999999999988754
No 103
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=92.14 E-value=0.18 Score=32.97 Aligned_cols=35 Identities=11% Similarity=0.437 Sum_probs=29.2
Q ss_pred ccccCCCEEEEEeccCCccceeeccCCccceeccccc
Q psy10189 17 LSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYI 53 (376)
Q Consensus 17 Lsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyv 53 (376)
..+.+|..+.|++. ..+|..++.+|..|||+.+.|
T Consensus 19 ~~l~~g~~v~v~~~--~~~W~~V~~~g~~GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVIEC--RGGWCKVRADGRTGWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEEEc--cCCeEEEEECCeEEeEEeeec
Confidence 46788999999864 447999999999999998765
No 104
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=91.82 E-value=0.28 Score=31.92 Aligned_cols=37 Identities=19% Similarity=0.491 Sum_probs=29.5
Q ss_pred eeccCCCEEEEEecCCCc-ceee-eeCCeeeeeeccccc
Q psy10189 171 LEFRRGDVITVTDRSDQH-WWHG-EIGARKGLFPATYIL 207 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~~~-w~~~-~~~~~~G~~P~~~v~ 207 (376)
-.+..|+.+.++....++ |... ...+..||++..||.
T Consensus 17 ~~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 17 GQLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS 55 (55)
T ss_dssp EEEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred EEEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence 346789999999887665 9999 468889999999874
No 105
>KOG0040|consensus
Probab=90.34 E-value=0.013 Score=61.84 Aligned_cols=54 Identities=24% Similarity=0.663 Sum_probs=47.3
Q ss_pred EEEeecCCCCCCCCccccCCCEEEEEeccCCccceeeccCCccceeccccccccc
Q psy10189 3 AIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 3 ~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~ 57 (376)
+.|+|+|...++.|.+.++||++.++.. ....||.++++...|+||+.||+...
T Consensus 971 v~alyd~q~kSprev~mKkgDvltll~s-~nkdwwkve~~d~qg~vpa~yvk~~~ 1024 (2399)
T KOG0040|consen 971 VLALYDYQEKSPREVTMKKGDVLTLLNS-INKDWWKVEVNDRQGFVPAAYVKRLD 1024 (2399)
T ss_pred HHHHHHHHhcCHHHHHHhhhhHHHHHhh-cccccccchhhhhcCcchHHHHHHhc
Confidence 4689999999999999999999988875 44569999999999999999998543
No 106
>KOG0199|consensus
Probab=90.05 E-value=0.29 Score=48.79 Aligned_cols=48 Identities=29% Similarity=0.553 Sum_probs=39.0
Q ss_pred cccCCCCCCCceeccCCCEEEEEecCC-Ccceeeee--CCeeeeeeccccc
Q psy10189 160 LYDFTPQEPGELEFRRGDVITVTDRSD-QHWWHGEI--GARKGLFPATYIL 207 (376)
Q Consensus 160 l~~~~~~~~~eL~~~~g~~i~v~~~~~-~~w~~~~~--~~~~G~~P~~~v~ 207 (376)
.-++....++.|.+.+||.|+|++... +.||.|.. +++.|.||.+-|.
T Consensus 380 ~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 380 RETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred eeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 345556678899999999999998765 45899953 7899999998886
No 107
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=89.53 E-value=0.35 Score=41.05 Aligned_cols=38 Identities=18% Similarity=0.445 Sum_probs=33.3
Q ss_pred cccCCCEEEEEeccCCccceeec-cCCccceeccccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIEM 55 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve~ 55 (376)
++++||.+.|+......+|.+++ .+|+.||||+.++..
T Consensus 49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~ 87 (205)
T COG3103 49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTS 87 (205)
T ss_pred EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhcc
Confidence 78999999999986666899999 678999999998763
No 108
>KOG3565|consensus
Probab=89.38 E-value=0.14 Score=51.20 Aligned_cols=58 Identities=26% Similarity=0.540 Sum_probs=48.9
Q ss_pred chhhhhhhcccCCCCCCCceeccCCCEEEEEecC-CCcceeee--eCCeeeeeeccccccc
Q psy10189 152 PEECLVQALYDFTPQEPGELEFRRGDVITVTDRS-DQHWWHGE--IGARKGLFPATYILNM 209 (376)
Q Consensus 152 ~~~~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~-~~~w~~~~--~~~~~G~~P~~~v~~~ 209 (376)
|....+.|+|.|.++.++++++.+|+++.+++.. +++|-.++ .++..|++|.+|+...
T Consensus 576 p~~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~ 636 (640)
T KOG3565|consen 576 PPIRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVT 636 (640)
T ss_pred CCccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccc
Confidence 4446788999999999999999999999998764 56788888 5788999999998764
No 109
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=88.70 E-value=0.75 Score=30.75 Aligned_cols=36 Identities=22% Similarity=0.480 Sum_probs=29.2
Q ss_pred eeccCCCEEEEEecCCCcceeeeeC-Ceeeeeecccc
Q psy10189 171 LEFRRGDVITVTDRSDQHWWHGEIG-ARKGLFPATYI 206 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~~~w~~~~~~-~~~G~~P~~~v 206 (376)
-.+..|+.+.++...+++|...+.. |..||++..++
T Consensus 25 ~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~ 61 (63)
T smart00287 25 GTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV 61 (63)
T ss_pred EEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence 3467899999998766689999875 89999987665
No 110
>KOG4566|consensus
Probab=87.84 E-value=0.92 Score=39.91 Aligned_cols=80 Identities=28% Similarity=0.428 Sum_probs=59.6
Q ss_pred cccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEE------ece--eecch
Q psy10189 56 KNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFL------WVV--KFNSL 127 (376)
Q Consensus 56 ~~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~~v~h~~I~~~~~~~~~~------~~~--~f~sl 127 (376)
....||++.++..+|+..+...+.|.|++|+|...+-.+.|+++.....+..+|.... +.+.. ... .|...
T Consensus 50 ~~~g~~w~~~~~~~~~~~l~~~p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~-~sfr~ds~~~~~~pl~~~e~~ 128 (258)
T KOG4566|consen 50 DSSGHYWGLETANEAELCLGQEPRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQD-SSFRLDSSHRHTPPLISFEDV 128 (258)
T ss_pred ccCCcccccccchhHHHhhcCCCccceeeecCcCccccceeEeeeccCCCCccccccc-cceecccccccCCCcccChhH
Confidence 3456899999999999999889999999999988888899999887776666665443 33332 112 36667
Q ss_pred hhhHhhhhc
Q psy10189 128 NELVEYHRT 136 (376)
Q Consensus 128 ~~li~~~~~ 136 (376)
..++++|+.
T Consensus 129 ~~~~~~y~~ 137 (258)
T KOG4566|consen 129 EVLIHHYRQ 137 (258)
T ss_pred HHHHHhhhh
Confidence 777777733
No 111
>KOG3812|consensus
Probab=87.17 E-value=0.41 Score=43.08 Aligned_cols=48 Identities=19% Similarity=0.430 Sum_probs=35.8
Q ss_pred EEEeecCCCCCCC-------CccccCCCEEEEEeccCCccceeec---cCCccceeccc
Q psy10189 3 AIAKHDFNATAED-------ELSFRKSQVLKILNMEDDMNWYRAE---LDGKEGLIPSN 51 (376)
Q Consensus 3 ~~al~~y~~~~~~-------eLsf~~Gd~i~v~~~~~~~~W~~~~---~~g~~G~vP~n 51 (376)
+.+.-+|.+.-++ -++|...|+|.|-++ ....||.|+ .....||+|+.
T Consensus 61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeK-ynnDWWIGRlVkeg~e~gFiPsp 118 (475)
T KOG3812|consen 61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEK-YNNDWWIGRLVKEGCEIGFIPSP 118 (475)
T ss_pred EEeccccCCccCCCCCCCCceeeeccccceeehhh-cccchhHHHHhhcCCccccccch
Confidence 4556677764443 379999999998876 556799988 35678999973
No 112
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=86.83 E-value=4.1 Score=28.27 Aligned_cols=43 Identities=16% Similarity=0.344 Sum_probs=34.2
Q ss_pred cccccccChHHHHHhhcC--CCCCceEEeecCCCCCceEEEEEeC
Q psy10189 238 DWYYGRITRADAERLLSN--KHEGAFLIRVSESSPGDFSLSVKCS 280 (376)
Q Consensus 238 ~w~~g~i~r~~ae~~L~~--~~~G~flvR~s~~~~~~~~ls~~~~ 280 (376)
|-|.--++=+|+.+.|+. .+.|+|+.|-|.++-|.+++-....
T Consensus 3 pgY~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~ 47 (86)
T PF02762_consen 3 PGYMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQ 47 (86)
T ss_dssp TTBETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEET
T ss_pred CceeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcC
Confidence 446677899999999983 5779999999999999999987663
No 113
>KOG0162|consensus
Probab=86.32 E-value=0.53 Score=46.77 Aligned_cols=27 Identities=33% Similarity=0.539 Sum_probs=24.9
Q ss_pred ceEEEeccCCCCCCCCccccccceeee
Q psy10189 334 CLVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
.++.|+|+|.+++++||+|.+|++|.-
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei 1078 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEI 1078 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEE
Confidence 668999999999999999999999875
No 114
>KOG3705|consensus
Probab=86.30 E-value=0.83 Score=42.16 Aligned_cols=52 Identities=15% Similarity=0.214 Sum_probs=39.1
Q ss_pred EEEEeecCCCCCCCCccccCCCEEEEEeccCCccceeec--cCCccceecccccc
Q psy10189 2 EAIAKHDFNATAEDELSFRKSQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYIE 54 (376)
Q Consensus 2 ~~~al~~y~~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~--~~g~~G~vP~nyve 54 (376)
..+|+++..+++.+||.++.||.|-|-.- -=+|+-.|. ..+++|+||+-=|+
T Consensus 511 n~ivi~aH~prt~~ei~l~vGD~vgvAGN-HWdGySKG~Nr~t~~~GlfPSyKvr 564 (580)
T KOG3705|consen 511 NVIVIEAHIPRTNKEIDLKVGDKVGVAGN-HWDGYSKGTNRQTYKEGLFPSYKVR 564 (580)
T ss_pred ceEEEEecCCCcccccCcccCCeeeeccc-ccccccccccccccccCCCccceee
Confidence 46899999999999999999999987541 222344444 46789999985544
No 115
>KOG2856|consensus
Probab=86.08 E-value=0.4 Score=43.60 Aligned_cols=28 Identities=36% Similarity=0.586 Sum_probs=24.9
Q ss_pred ceEEEeccCCCCCCCCccccccceeeee
Q psy10189 334 CLVQALYDFTPQEPGELEFRRDLKIKRR 361 (376)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 361 (376)
..++|||||.+...+||+|++|+.|.+.
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl 442 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKL 442 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhc
Confidence 5688999999999999999999988753
No 116
>PRK10884 SH3 domain-containing protein; Provisional
Probab=84.39 E-value=1.2 Score=38.01 Aligned_cols=41 Identities=10% Similarity=0.129 Sum_probs=33.5
Q ss_pred eeccCCCEEEEEecCC-Ccceeeee-CCeeeeeeccccccccc
Q psy10189 171 LEFRRGDVITVTDRSD-QHWWHGEI-GARKGLFPATYILNMED 211 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~-~~w~~~~~-~~~~G~~P~~~v~~~~~ 211 (376)
-.+.+|+.++|++..+ ++|...+. +|+.||++..|+...++
T Consensus 48 ~~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p~ 90 (206)
T PRK10884 48 GTLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTPS 90 (206)
T ss_pred EEEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCcc
Confidence 3577899999998765 67999984 78999999999976543
No 117
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=83.42 E-value=1.1 Score=43.07 Aligned_cols=36 Identities=19% Similarity=0.535 Sum_probs=30.9
Q ss_pred cccCCCEEEEEeccCCccceeecc-CCccceecccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAEL-DGKEGLIPSNYIE 54 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~vP~nyve 54 (376)
++.+|+.|.|+.. .+.+|++.+. +|++|||-+.||.
T Consensus 104 sl~~G~~V~Vl~~-~~ngW~kI~~~~GktGwV~~~YLs 140 (481)
T PRK13914 104 SIKGGTKVTVETT-ESNGWHKITYNDGKTGFVNGKYLT 140 (481)
T ss_pred eecCCCEEEEeec-ccCCeEEEEcCCCCEEEEeccccc
Confidence 7899999999852 4557999997 5999999999987
No 118
>KOG3705|consensus
Probab=82.24 E-value=0.82 Score=42.21 Aligned_cols=54 Identities=20% Similarity=0.342 Sum_probs=39.4
Q ss_pred hhhhhcccCCCCCCCceeccCCCEEEEEecCCCcceeeee--CCeeeeeecccccc
Q psy10189 155 CLVQALYDFTPQEPGELEFRRGDVITVTDRSDQHWWHGEI--GARKGLFPATYILN 208 (376)
Q Consensus 155 ~~~~al~~~~~~~~~eL~~~~g~~i~v~~~~~~~w~~~~~--~~~~G~~P~~~v~~ 208 (376)
...+++++..++..+|+.++.||.+.|-...=+|.-.|.. .++.|+||+--|+.
T Consensus 510 Hn~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre 565 (580)
T KOG3705|consen 510 HNVIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE 565 (580)
T ss_pred cceEEEEecCCCcccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence 3578899999999999999999999886433233334433 47788888866654
No 119
>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.
Probab=81.96 E-value=2.1 Score=27.79 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=25.4
Q ss_pred ccccCCCEEEEEeccCCccceeeccCCccceecc
Q psy10189 17 LSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPS 50 (376)
Q Consensus 17 Lsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~ 50 (376)
-.+..|+-|.|+....|..|.++....-.|||++
T Consensus 21 s~l~~gtPv~i~H~S~D~~W~fV~t~~~~GWV~s 54 (54)
T PF12913_consen 21 SALHPGTPVYILHTSRDGAWAFVQTPFYSGWVKS 54 (54)
T ss_dssp EEE-TT-EEEEEEE-TTSSEEEEE-SS-EEEEEG
T ss_pred cccCCCCCEEEEEECCCCCEEEEecCCeeEeeeC
Confidence 3678899999999877778999999999999985
No 120
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=79.78 E-value=3.2 Score=26.93 Aligned_cols=35 Identities=14% Similarity=0.291 Sum_probs=27.9
Q ss_pred eeccCCCEEEEEecCCCcceeeeeCCeeeeeecccc
Q psy10189 171 LEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYI 206 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v 206 (376)
..+.+|..+.++ ...++|...+..|..||++...|
T Consensus 19 ~~l~~g~~v~v~-~~~~~W~~V~~~g~~GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVI-ECRGGWCKVRADGRTGWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEE-EccCCeEEEEECCeEEeEEeeec
Confidence 456678888887 45688999998899999988765
No 121
>KOG3812|consensus
Probab=79.74 E-value=0.78 Score=41.34 Aligned_cols=38 Identities=21% Similarity=0.741 Sum_probs=32.7
Q ss_pred CCCceeccCCCEEEEEecCCCcceeeee---CCeeeeeecc
Q psy10189 167 EPGELEFRRGDVITVTDRSDQHWWHGEI---GARKGLFPAT 204 (376)
Q Consensus 167 ~~~eL~~~~g~~i~v~~~~~~~w~~~~~---~~~~G~~P~~ 204 (376)
....++|...|.+.|-++.+.+||-|++ +...|++|+.
T Consensus 78 ~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPsp 118 (475)
T KOG3812|consen 78 QGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP 118 (475)
T ss_pred CCceeeeccccceeehhhcccchhHHHHhhcCCccccccch
Confidence 3446899999999999999999999986 6789999974
No 122
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=70.70 E-value=4.4 Score=26.86 Aligned_cols=23 Identities=17% Similarity=0.647 Sum_probs=19.0
Q ss_pred cccCCCEEEEEeccCCccceeecc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAEL 41 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~~ 41 (376)
.|+.||.|++... +++.||.|..
T Consensus 2 ~~~~G~~Ve~~~~-~~~~W~~a~V 24 (61)
T smart00743 2 DFKKGDRVEVFSK-EEDSWWEAVV 24 (61)
T ss_pred CcCCCCEEEEEEC-CCCEEEEEEE
Confidence 5899999999986 4678999873
No 123
>KOG3667|consensus
Probab=69.46 E-value=8 Score=38.64 Aligned_cols=61 Identities=23% Similarity=0.361 Sum_probs=44.3
Q ss_pred cccccccccChHHHHHhhcCCCCCceEEeecCCCCCceEEEEEeCCee-EEEEEEEcCCCcE
Q psy10189 236 NHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSDGV-QHFKVLRDSSGKF 296 (376)
Q Consensus 236 ~~~w~~g~i~r~~ae~~L~~~~~G~flvR~s~~~~~~~~ls~~~~~~v-~h~~I~~~~~~~~ 296 (376)
+.....|.+++..+-++|...++|+|++|-|.+..|--++......+- .|+-|.....+.+
T Consensus 562 ~dg~Imgfinkq~~~~ll~~~~~GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~P~t~~~l 623 (682)
T KOG3667|consen 562 NDGVIMGFINKQQERALLMTKPDGTFLLRFSASEEGGITIAWVEDQKQNLIMMIMPFTKGDL 623 (682)
T ss_pred hcceeeeecchhhhhhhhhcCCCCCceeeeeccccCceeEEecccccccceeEecccccccc
Confidence 445567889999999999999999999999988777666665553322 5777774434433
No 124
>KOG1094|consensus
Probab=62.68 E-value=3 Score=41.08 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=22.6
Q ss_pred CCCCCCcccccc-ceeeeecCCCCCCccceec
Q psy10189 344 PQEPGELEFRRD-LKIKRRKSAKTKDETTVRE 374 (376)
Q Consensus 344 ~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~ 374 (376)
...+.--+|.+. ++|++|||+|+||||-.=|
T Consensus 527 ~k~~al~EfPRs~L~~~ekiGeGqFGEVhLCe 558 (807)
T KOG1094|consen 527 GKGPALVEFPRSRLRFKEKIGEGQFGEVHLCE 558 (807)
T ss_pred ccCcchhhcchhheehhhhhcCcccceeEEEE
Confidence 344555567775 6777799999999986544
No 125
>PF07935 SSV1_ORF_D-335: ORF D-335-like protein; InterPro: IPR012922 The sequences featured in this family are similar to a probable integrase (P20214 from SWISSPROT) expressed by the SSV1 virus of the archaeon Sulfolobus shibatae. This protein may be necessary for the integration of the virus into the host genome by a process of site-specific recombination [].
Probab=62.51 E-value=35 Score=23.41 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=29.7
Q ss_pred CCceEEeecCCCCCceEEEEEeCCeeEEEEEEEcCCCcEEEeccccCCHHHHHHHHhhC
Q psy10189 258 EGAFLIRVSESSPGDFSLSVKCSDGVQHFKVLRDSSGKFFLWVVKFNSLNELVEYHRTA 316 (376)
Q Consensus 258 ~G~flvR~s~~~~~~~~ls~~~~~~v~h~~I~~~~~~~~~~~~~~f~sl~~lv~~y~~~ 316 (376)
-|.|+||+.. |. -.-|+|..+.+|. .-+.+-.+|.++|+.|.+.
T Consensus 5 ~gd~~irE~K---Gk----------YYVY~iE~~~~G~--~re~YVGpL~~VVe~Yik~ 48 (72)
T PF07935_consen 5 FGDIIIRERK---GK----------YYVYKIEKDINGE--RRETYVGPLDDVVETYIKL 48 (72)
T ss_pred cCcEEEEEeC---Ce----------EEEEEEEeccCCc--eeeeeeccHHHHHHHHHhc
Confidence 4788899773 32 2456776655552 2345667899999999875
No 126
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=56.73 E-value=16 Score=31.21 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=32.7
Q ss_pred eeccCCCEEEEEecCCC-cceeeee-CCeeeeeecccccccc
Q psy10189 171 LEFRRGDVITVTDRSDQ-HWWHGEI-GARKGLFPATYILNME 210 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~~-~w~~~~~-~~~~G~~P~~~v~~~~ 210 (376)
=++++|+.++|+..... +|...+. .|+.||||..++..-+
T Consensus 48 ~~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~ 89 (205)
T COG3103 48 GSIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEP 89 (205)
T ss_pred eEecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhcccc
Confidence 36889999999988665 7888885 7999999998886543
No 127
>KOG1843|consensus
Probab=56.68 E-value=8 Score=36.06 Aligned_cols=27 Identities=33% Similarity=0.657 Sum_probs=24.6
Q ss_pred ceEEEeccCCCCCCCCccccccceeee
Q psy10189 334 CLVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
..+.|+|+|....+.+|.|.+||||.-
T Consensus 417 n~a~a~ysfage~~GDl~f~kgDii~i 443 (473)
T KOG1843|consen 417 NIATALYSFAGEQPGDLSFQKGDIITI 443 (473)
T ss_pred ceeeeeehhccCCCCCcccccCceEEE
Confidence 368899999999999999999999984
No 128
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=54.92 E-value=15 Score=35.51 Aligned_cols=39 Identities=15% Similarity=0.393 Sum_probs=32.7
Q ss_pred eeccCCCEEEEEecCCCcceeeee-CCeeeeeeccccccc
Q psy10189 171 LEFRRGDVITVTDRSDQHWWHGEI-GARKGLFPATYILNM 209 (376)
Q Consensus 171 L~~~~g~~i~v~~~~~~~w~~~~~-~~~~G~~P~~~v~~~ 209 (376)
-++.+|+.+.|+.....+|+..+. +|+.|||-..||...
T Consensus 103 gsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~ 142 (481)
T PRK13914 103 TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDK 142 (481)
T ss_pred eeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCC
Confidence 357899999998766778999998 599999999999753
No 129
>KOG1702|consensus
Probab=51.56 E-value=8.6 Score=32.22 Aligned_cols=27 Identities=26% Similarity=0.396 Sum_probs=24.2
Q ss_pred ceEEEeccCCCCCCCCccccccceeee
Q psy10189 334 CLVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 334 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
...+|.|||.+.+.+|++|..|+-|.-
T Consensus 208 ktyra~ydysaqdedevsF~dgd~ivn 234 (264)
T KOG1702|consen 208 KTYRAFYDYSAQDEDEVSFVDGDYIVN 234 (264)
T ss_pred ccchhhccCcccCcceeEEecCCeEEE
Confidence 457899999999999999999998875
No 130
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=48.47 E-value=19 Score=25.08 Aligned_cols=25 Identities=16% Similarity=0.456 Sum_probs=17.7
Q ss_pred CccccCCCEEEEEecc-----CCccceeec
Q psy10189 16 ELSFRKSQVLKILNME-----DDMNWYRAE 40 (376)
Q Consensus 16 eLsf~~Gd~i~v~~~~-----~~~~W~~~~ 40 (376)
-|+++.||.+.|-... .+..||-|.
T Consensus 3 FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~ 32 (75)
T PF11302_consen 3 FLSVKPGDTVIVQDEQEVGQKQDKDWWMGQ 32 (75)
T ss_pred ccccCCCCEEEEecCccccccCCCCcEEEE
Confidence 3789999999665431 245788876
No 131
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=46.73 E-value=27 Score=25.41 Aligned_cols=29 Identities=21% Similarity=0.653 Sum_probs=24.8
Q ss_pred hcCCCCCceEEeecCCCCCceEEEEEeCC
Q psy10189 253 LSNKHEGAFLIRVSESSPGDFSLSVKCSD 281 (376)
Q Consensus 253 L~~~~~G~flvR~s~~~~~~~~ls~~~~~ 281 (376)
+....+|+|.|+-.....|.|.|+++.++
T Consensus 50 v~d~~dGty~v~y~P~~~G~~~i~V~~~g 78 (93)
T smart00557 50 VKDNGDGTYTVSYTPTEPGDYTVTVKFGG 78 (93)
T ss_pred EEeCCCCEEEEEEEeCCCEeEEEEEEECC
Confidence 34567899999998889999999999876
No 132
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=43.26 E-value=1.1e+02 Score=21.36 Aligned_cols=44 Identities=18% Similarity=0.372 Sum_probs=34.5
Q ss_pred ccccccCCHHHHHHHhcC--CCCccEEEeecCCCCCceEEEEEeCC
Q psy10189 59 DWYYGRITRADAERLLSN--KHEGAFLIRVSESSPGDFSLSVKCSD 102 (376)
Q Consensus 59 ~w~~g~isr~~ae~~l~~--~~~G~flvR~s~~~~~~~~Ls~~~~~ 102 (376)
+-|..-++=++.++.|.. ..+|+|+.|-|-+.-|.+.+.....+
T Consensus 3 pgY~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~d 48 (86)
T PF02762_consen 3 PGYMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQD 48 (86)
T ss_dssp TTBETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEETT
T ss_pred CceeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcCC
Confidence 345567788999999988 67899999999999999998766543
No 133
>KOG4257|consensus
Probab=41.12 E-value=13 Score=37.23 Aligned_cols=27 Identities=15% Similarity=0.096 Sum_probs=22.0
Q ss_pred CCCccccccceeee-ecCCCCCCcccee
Q psy10189 347 PGELEFRRDLKIKR-RKSAKTKDETTVR 373 (376)
Q Consensus 347 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 373 (376)
-...++.+.+|..+ +||.||||+|-.|
T Consensus 381 ~rnyel~Re~Itl~r~iG~GqFGdVy~g 408 (974)
T KOG4257|consen 381 VRNYELRRELITLKRLIGEGQFGDVYKG 408 (974)
T ss_pred CCcceeehhhccHHHhhcCCcccceeee
Confidence 34677888888877 9999999998654
No 134
>KOG1785|consensus
Probab=39.06 E-value=49 Score=30.91 Aligned_cols=48 Identities=19% Similarity=0.396 Sum_probs=39.7
Q ss_pred cccccccccChHHHHHhhcC--CCCCceEEeecCCCCCceEEEEEe-CCee
Q psy10189 236 NHDWYYGRITRADAERLLSN--KHEGAFLIRVSESSPGDFSLSVKC-SDGV 283 (376)
Q Consensus 236 ~~~w~~g~i~r~~ae~~L~~--~~~G~flvR~s~~~~~~~~ls~~~-~~~v 283 (376)
..|-|+-.++=+|+..+|.. .+.|+|+.|-|.+.-|.+++-... +|+|
T Consensus 255 tHPGYmAFLTYDEVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt~dG~I 305 (563)
T KOG1785|consen 255 THPGYMAFLTYDEVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVTADGNI 305 (563)
T ss_pred cCCceeEEeeHHHHHHHHHHHhcCCCceEEeeccCcccceeEEEEcCCCce
Confidence 44667788899999999984 578999999999999999998776 4444
No 135
>KOG4384|consensus
Probab=35.64 E-value=24 Score=32.42 Aligned_cols=53 Identities=21% Similarity=0.388 Sum_probs=43.1
Q ss_pred EeecCC--CCCCCCccccCCCEEEEEeccCCccceeeccCCccceecccccccccc
Q psy10189 5 AKHDFN--ATAEDELSFRKSQVLKILNMEDDMNWYRAELDGKEGLIPSNYIEMKNH 58 (376)
Q Consensus 5 al~~y~--~~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~~~g~~G~vP~nyve~~~~ 58 (376)
+.-+|. +...++|.+++||+|.++.+ ..-+=|.+-++++.|-|+--||.....
T Consensus 141 ~~t~~tp~p~~~d~lk~~~~~~i~~~~~-~~~~~~~g~~~~kv~~f~~~~v~~~s~ 195 (361)
T KOG4384|consen 141 VHTDFTPSPYDTDSLKIKKGDIIDIIEK-PPMGTWLGLLNNKVGSFKFIYVDVISE 195 (361)
T ss_pred ccccCCCCcccccchhhcccchhhcccc-CccccccccccCcccccccceeccccc
Confidence 334444 36778999999999999997 667889999999999999999876543
No 136
>KOG0605|consensus
Probab=33.90 E-value=15 Score=35.69 Aligned_cols=16 Identities=6% Similarity=0.044 Sum_probs=14.0
Q ss_pred eeeeecCCCCCCccce
Q psy10189 357 KIKRRKSAKTKDETTV 372 (376)
Q Consensus 357 ~~~~~~~~~~~~~~~~ 372 (376)
.+++.||.|+||||+.
T Consensus 144 e~Lk~IgkGAfGeVrL 159 (550)
T KOG0605|consen 144 ELLKVIGKGAFGEVRL 159 (550)
T ss_pred hhheeeccccceeEEE
Confidence 4677999999999985
No 137
>KOG3508|consensus
Probab=30.92 E-value=63 Score=33.99 Aligned_cols=84 Identities=21% Similarity=0.293 Sum_probs=53.7
Q ss_pred CCCCCccccCCCEEEEEeccCCccceeec-c-CCccceecccccc--------ccccccccccCCHHHHHHHhcC-CCCc
Q psy10189 12 TAEDELSFRKSQVLKILNMEDDMNWYRAE-L-DGKEGLIPSNYIE--------MKNHDWYYGRITRADAERLLSN-KHEG 80 (376)
Q Consensus 12 ~~~~eLsf~~Gd~i~v~~~~~~~~W~~~~-~-~g~~G~vP~nyve--------~~~~~w~~g~isr~~ae~~l~~-~~~G 80 (376)
...++|.|.+|+.. +...+-.++|+.+. . .+..|.+=..-+. -....|++.+|...+|...+.. ...+
T Consensus 175 ~~n~~l~~~~~~~f-~~~~~~~d~w~~v~t~~~~e~~~i~~s~~~~~~~~~~~~~~ar~q~i~i~~~e~y~~~~e~~~~~ 253 (932)
T KOG3508|consen 175 PTNDEIGFVKGDEF-PVHRDLEDGWYWVTTSRTDEGGSIIASLVGGKSESPDPRIKARWQSINILPMEAYDELAETGTYN 253 (932)
T ss_pred Ccccccccccchhh-eecccccceeEEeeccccccCCcccccccccccCCCCccccccccccccCchHHHHHHHHHhccc
Confidence 45678999998776 44544556677664 2 2222221111111 1346799999999999988888 5555
Q ss_pred cEEEeecCCCCCceEE
Q psy10189 81 AFLIRVSESSPGDFSL 96 (376)
Q Consensus 81 ~flvR~s~~~~~~~~L 96 (376)
.|+++.+...+++|.+
T Consensus 254 y~~lc~~lnp~l~~~~ 269 (932)
T KOG3508|consen 254 YFLLCPVLNPPLDVSL 269 (932)
T ss_pred eeeeecccCCCcchhH
Confidence 8888887776666543
No 138
>COG3807 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.73 E-value=1.1e+02 Score=24.46 Aligned_cols=35 Identities=29% Similarity=0.560 Sum_probs=28.3
Q ss_pred cccCCCEEEEEeccCCccceeec-cCCccceecccccc
Q psy10189 18 SFRKSQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIE 54 (376)
Q Consensus 18 sf~~Gd~i~v~~~~~~~~W~~~~-~~g~~G~vP~nyve 54 (376)
-+++|.-++|++. .+ +|=..+ .+|.+|||-++.+.
T Consensus 60 y~k~GlPVEIvqE-y~-~WRrirDadG~egWv~qslls 95 (171)
T COG3807 60 YLKKGLPVEIVQE-YD-NWRRIRDADGTEGWVHQSLLS 95 (171)
T ss_pred eeccCCceehhhh-hh-hhhheeCCCCCceeeeeeccc
Confidence 4688999999985 43 588777 79999999988765
No 139
>KOG2052|consensus
Probab=29.67 E-value=36 Score=32.60 Aligned_cols=21 Identities=10% Similarity=-0.015 Sum_probs=16.9
Q ss_pred cccceeeeecCCCCCCcccee
Q psy10189 353 RRDLKIKRRKSAKTKDETTVR 373 (376)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~ 373 (376)
-+...+.+-+|.|-||||..|
T Consensus 210 arqI~L~e~IGkGRyGEVwrG 230 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRG 230 (513)
T ss_pred hheeEEEEEecCccccceeec
Confidence 355667789999999999765
No 140
>PF00630 Filamin: Filamin/ABP280 repeat; InterPro: IPR017868 The many different actin cross-linking proteins share a common architecture, consisting of a globular actin-binding domain and an extended rod. Whereas their actin-binding domains consist of two calponin homology domains (see IPR001715 from INTERPRO), their rods fall into three families. The rod domain of the family including the Dictyostelium discoideum (Slime mould) gelation factor (ABP120) and human filamin (ABP280) is constructed from tandem repeats of a 100-residue motif that is glycine and proline rich []. The gelation factor's rod contains 6 copies of the repeat, whereas filamin has a rod constructed from 24 repeats. The resolution of the 3D structure of rod repeats from the gelation factor has shown that they consist of a beta-sandwich, formed by two beta-sheets arranged in an immunoglobulin-like fold [, ]. Because conserved residues that form the core of the repeats are preserved in filamin, the repeat structure should be common to the members of the gelation factor/filamin family. The head to tail homodimerisation is crucial to the function of the ABP120 and ABP280 proteins. This interaction involves a small portion at the distal end of the rod domains. For the gelation factor it has been shown that the carboxy-terminal repeat 6 dimerises through a double edge-to-edge extension of the beta-sheet and that repeat 5 contributes to dimerisation to some extent [, , ].; PDB: 2DI9_A 2EEC_A 2DIC_A 2EEA_A 2DMC_A 2EE9_A 2D7O_A 2D7N_A 2K7P_A 2NQC_A ....
Probab=29.49 E-value=56 Score=23.80 Aligned_cols=27 Identities=22% Similarity=0.633 Sum_probs=23.0
Q ss_pred CCCCCceEEeecCCCCCceEEEEEeCC
Q psy10189 255 NKHEGAFLIRVSESSPGDFSLSVKCSD 281 (376)
Q Consensus 255 ~~~~G~flvR~s~~~~~~~~ls~~~~~ 281 (376)
...+|+|.|+-.....|.|.|+|+.++
T Consensus 66 ~~~~G~y~v~y~p~~~G~y~i~V~~~g 92 (101)
T PF00630_consen 66 DNGDGTYTVSYTPTEPGKYKISVKING 92 (101)
T ss_dssp EESSSEEEEEEEESSSEEEEEEEEESS
T ss_pred ECCCCEEEEEEEeCccEeEEEEEEECC
Confidence 345899999988888999999999876
No 141
>PF05641 Agenet: Agenet domain; InterPro: IPR008395 This domain is related to the TUDOR domain IPR008191 from INTERPRO []. The function of the agenet domain is unknown. This signature matches one of the two Agenet domains in the FMR proteins [].; GO: 0003723 RNA binding; PDB: 2BKD_N 3O8V_A 3KUF_A 3H8Z_A.
Probab=28.19 E-value=53 Score=22.30 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=11.6
Q ss_pred ccCCCEEEEEeccCC--ccceeec
Q psy10189 19 FRKSQVLKILNMEDD--MNWYRAE 40 (376)
Q Consensus 19 f~~Gd~i~v~~~~~~--~~W~~~~ 40 (376)
|++|+.|+|....++ ..|+.|.
T Consensus 1 F~~G~~VEV~s~e~g~~gaWf~a~ 24 (68)
T PF05641_consen 1 FKKGDEVEVSSDEDGFRGAWFPAT 24 (68)
T ss_dssp --TT-EEEEEE-SBTT--EEEEEE
T ss_pred CCCCCEEEEEEcCCCCCcEEEEEE
Confidence 789999999975222 2366555
No 142
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=26.82 E-value=51 Score=32.71 Aligned_cols=37 Identities=22% Similarity=0.489 Sum_probs=28.9
Q ss_pred CCCEEEEEecc----CCccceeec-cCCccceeccccccccc
Q psy10189 21 KSQVLKILNME----DDMNWYRAE-LDGKEGLIPSNYIEMKN 57 (376)
Q Consensus 21 ~Gd~i~v~~~~----~~~~W~~~~-~~g~~G~vP~nyve~~~ 57 (376)
=||.+.|.+.+ .+-+|.+.. .+|.+||+...||++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (549)
T PRK13545 374 FGDIFTISDSNKNEKKDVEWIQITLSNGEIGWISTKFIEPFK 415 (549)
T ss_pred cCceEEEcccccccccCcceEEEEecCCccceeeeeeeeecc
Confidence 38888887642 334799998 78999999999998654
No 143
>KOG3580|consensus
Probab=26.33 E-value=97 Score=30.83 Aligned_cols=49 Identities=16% Similarity=0.517 Sum_probs=35.2
Q ss_pred EEeecCCCCCCCCccccCCCEEEEEec--cCC-ccceeeccCC-----ccceecccc
Q psy10189 4 IAKHDFNATAEDELSFRKSQVLKILNM--EDD-MNWYRAELDG-----KEGLIPSNY 52 (376)
Q Consensus 4 ~al~~y~~~~~~eLsf~~Gd~i~v~~~--~~~-~~W~~~~~~g-----~~G~vP~ny 52 (376)
..-|.|+...+.-|+|.+||++.|+.. +.. .+|.-++... ..|++|...
T Consensus 508 RtHFE~Eke~P~gL~FtrGeVFrvvDTLy~GklG~WLAvRiG~dlrE~ErGiIPNks 564 (1027)
T KOG3580|consen 508 RTHFECEKETPQGLAFTRGEVFRVVDTLYDGKLGNWLAVRIGNDLRELERGIIPNKS 564 (1027)
T ss_pred eeeeeecCCCCccccccccceeeeeecccCCCCcceEEEeecccHHHHhcccCCCcc
Confidence 445778889999999999999999985 222 2466666322 469999643
No 144
>KOG4384|consensus
Probab=25.87 E-value=63 Score=29.81 Aligned_cols=56 Identities=23% Similarity=0.529 Sum_probs=45.8
Q ss_pred hhhhcccCCC--CCCCceeccCCCEEEEEecCCCcceeeeeCCeeeeeeccccccccc
Q psy10189 156 LVQALYDFTP--QEPGELEFRRGDVITVTDRSDQHWWHGEIGARKGLFPATYILNMED 211 (376)
Q Consensus 156 ~~~al~~~~~--~~~~eL~~~~g~~i~v~~~~~~~w~~~~~~~~~G~~P~~~v~~~~~ 211 (376)
.+++.-+|.+ .+.++|.+++|+++.++.+..-+-|.+-++++.|.|+--||..+..
T Consensus 138 ~~~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~~~kv~~f~~~~v~~~s~ 195 (361)
T KOG4384|consen 138 RARVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGLLNNKVGSFKFIYVDVISE 195 (361)
T ss_pred cccccccCCCCcccccchhhcccchhhccccCccccccccccCcccccccceeccccc
Confidence 3444445554 4678899999999999999999999999999999999999877643
No 145
>KOG3667|consensus
Probab=22.97 E-value=1.2e+02 Score=30.73 Aligned_cols=57 Identities=23% Similarity=0.345 Sum_probs=39.8
Q ss_pred cccccccccccCCHHHHHHHhcCCCCccEEEeecCCCCCceEEEEEeCC-eeEEEEEE
Q psy10189 54 EMKNHDWYYGRITRADAERLLSNKHEGAFLIRVSESSPGDFSLSVKCSD-GVQHFKVL 110 (376)
Q Consensus 54 e~~~~~w~~g~isr~~ae~~l~~~~~G~flvR~s~~~~~~~~Ls~~~~~-~v~h~~I~ 110 (376)
.+..+..-.|.+++..+.+++...++|+|++|.|.+.-|..++...... ...++.|.
T Consensus 559 ~Lw~dg~Imgfinkq~~~~ll~~~~~GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~ 616 (682)
T KOG3667|consen 559 PLWNDGVIMGFINKQQERALLMTKPDGTFLLRFSASEEGGITIAWVEDQKQNLIMMIM 616 (682)
T ss_pred HHhhcceeeeecchhhhhhhhhcCCCCCceeeeeccccCceeEEecccccccceeEec
Confidence 3444455677889999999999999999999999887776665443322 22344444
No 146
>KOG1026|consensus
Probab=22.21 E-value=36 Score=35.10 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=22.9
Q ss_pred CCCCccccccceeee-ecCCCCCCccceecc
Q psy10189 346 EPGELEFRRDLKIKR-RKSAKTKDETTVREQ 375 (376)
Q Consensus 346 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 375 (376)
+..-++|.+.++..+ +||+|+||+|=-+|+
T Consensus 477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~ 507 (774)
T KOG1026|consen 477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEA 507 (774)
T ss_pred ccceeEechhheeehhhhcCchhhhhhhhhc
Confidence 345677888777666 999999999976653
No 147
>KOG3725|consensus
Probab=21.91 E-value=40 Score=29.43 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.3
Q ss_pred eEEEeccCCCCCCCCccccccceeee
Q psy10189 335 LVQALYDFTPQEPGELEFRRDLKIKR 360 (376)
Q Consensus 335 ~~~~~~~~~~~~~~~l~~~~~~~~~~ 360 (376)
..+++|||.+..+.||++..+++|.-
T Consensus 319 kArVlyDYdAa~s~ElslladeiitV 344 (375)
T KOG3725|consen 319 KARVLYDYDAALSQELSLLADEIITV 344 (375)
T ss_pred ceeeeecccccchhhhhhhhcceEEE
Confidence 36779999999999999999877653
Done!