Query psy10193
Match_columns 135
No_of_seqs 133 out of 1046
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 20:14:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10193.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10193hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rd1_A Putative outer membrane 88.0 1.2 4.2E-05 28.5 5.2 39 34-80 5-43 (62)
2 2k57_A Putative lipoprotein; s 86.9 1.2 4.3E-05 28.4 4.8 39 34-80 5-43 (61)
3 3bdu_A Putative lipoprotein; X 86.0 1.1 3.9E-05 28.7 4.2 39 34-80 5-43 (62)
4 2rb6_A Uncharacterized protein 85.9 1.5 5.3E-05 27.9 4.8 39 34-80 5-43 (61)
5 2jn0_A Hypothetical lipoprotei 83.2 1.6 5.4E-05 27.9 4.0 38 35-80 6-43 (61)
6 2ra2_A Putative lipoprotein; X 82.2 1.4 5E-05 28.3 3.5 39 34-80 6-44 (64)
7 3p34_A Serine/threonine-protei 52.3 25 0.00084 27.5 5.3 40 31-76 58-98 (232)
8 1xvs_A Protein APAG; MCSG APC2 45.5 51 0.0017 23.3 5.7 21 60-80 93-113 (126)
9 2f1e_A Protein APAG; APAG prot 44.2 47 0.0016 23.5 5.3 21 60-80 94-114 (127)
10 1tza_A APAG protein, SOR45; st 42.0 44 0.0015 23.9 4.9 21 60-80 93-113 (134)
11 1xq4_A Protein APAG; all beta 41.6 49 0.0017 23.9 5.2 21 60-80 98-118 (139)
12 3ca8_A Protein YDCF; two domai 37.9 25 0.00087 27.6 3.4 33 83-115 221-253 (266)
13 1twu_A Hypothetical protein YY 37.4 22 0.00076 23.3 2.6 18 64-82 116-133 (139)
14 4gym_A Glyoxalase/bleomycin re 34.2 35 0.0012 22.6 3.3 17 66-82 117-133 (149)
15 1q4k_B Serine/threonine-protei 33.6 75 0.0026 25.0 5.5 21 31-55 76-96 (259)
16 3tue_A Tryparedoxin peroxidase 32.9 85 0.0029 23.9 5.6 24 58-82 142-165 (219)
17 3bid_A UPF0339 protein NMB1088 28.6 45 0.0015 20.9 2.8 23 23-45 4-26 (64)
18 3rri_A Glyoxalase/bleomycin re 28.4 52 0.0018 21.1 3.2 20 66-85 112-131 (135)
19 3keb_A Probable thiol peroxida 26.1 72 0.0025 24.3 4.1 47 69-126 142-193 (224)
20 3ega_A Pellino-2, protein pell 25.2 1.5E+02 0.005 23.8 5.7 53 38-90 38-92 (263)
21 3sbc_A Peroxiredoxin TSA1; alp 21.3 1.6E+02 0.0056 22.2 5.2 24 59-83 139-162 (216)
No 1
>2rd1_A Putative outer membrane lipoprotein; X-RAY, NESG, Q7CQI7, STR87A, structural genomics, PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium LT2} SCOP: b.38.1.6
Probab=87.96 E-value=1.2 Score=28.52 Aligned_cols=39 Identities=26% Similarity=0.450 Sum_probs=29.9
Q ss_pred eEEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 34 FAFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 34 f~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
|--.+.||..-...|.++-. .-.|.|+|.+.+|+.+.|+
T Consensus 5 yvitt~DG~~IvT~gKP~~D--------~dTGm~sY~D~~G~~~qIn 43 (62)
T 2rd1_A 5 YVMTTKNGQTIVTQGKPQLD--------KETGMTSYTDQEGNQREIN 43 (62)
T ss_dssp EEEEETTSCEEEEESCCEEE--------TTTTEEEEECTTSCEEEEE
T ss_pred eEEEeCCCcEEEcCCCccee--------CCCCCEEEEcCCCCEEEEc
Confidence 44567888888777776532 3489999999999998875
No 2
>2k57_A Putative lipoprotein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pseudomonas syringae PV} SCOP: b.38.1.6
Probab=86.92 E-value=1.2 Score=28.38 Aligned_cols=39 Identities=15% Similarity=0.226 Sum_probs=29.0
Q ss_pred eEEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 34 FAFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 34 f~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
|--.+.||..-...|.++-. .-.|.|+|.|.+|+.+.|+
T Consensus 5 yvitt~DG~~IvT~gKP~~D--------~dTGmysY~D~~G~~~qIn 43 (61)
T 2k57_A 5 TVITLNDGREIQAVDTPKYD--------EESGFYEFKQLDGKQTRIN 43 (61)
T ss_dssp EEEEESSSCEEEESSCCEEC--------TTTCEEEEEBTTSCEEEEE
T ss_pred eEEEeCCCcEEEcCCCcccc--------CCCCCEEEEcCCCCEEEEc
Confidence 34467788877777666532 3489999999999998874
No 3
>3bdu_A Putative lipoprotein; X_RAY, NESG, Q6D8G1, structural genomics, PSI-2, protein structure initiative; 1.90A {Pectobacterium atrosepticum SCRI1043} SCOP: b.38.1.6
Probab=85.96 E-value=1.1 Score=28.67 Aligned_cols=39 Identities=26% Similarity=0.403 Sum_probs=29.7
Q ss_pred eEEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 34 FAFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 34 f~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
|--.+.||..-...|.++-. .-.|.|+|.|.+|+.+.|+
T Consensus 5 yvitt~DG~~IvT~gKP~~D--------~dTGmysY~D~~G~~~qIn 43 (62)
T 3bdu_A 5 YVLHTNDGRTIVAEGKPKVD--------DETGMISYTDAYGQQQQIN 43 (62)
T ss_dssp EEEEETTSCEEEEESCCEEC--------TTTSSEEEEBTTSCEEEEC
T ss_pred eEEEECCCcEEEcCCCccee--------CCCCCEEEEcCCCCEEEEc
Confidence 44567888888777776532 3489999999999998764
No 4
>2rb6_A Uncharacterized protein; NESG, Q8EI81_sheon, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.50A {Shewanella oneidensis} SCOP: b.38.1.6
Probab=85.85 E-value=1.5 Score=27.95 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=28.7
Q ss_pred eEEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 34 FAFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 34 f~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
|--.+.||..-...|.++-. .-.|.|+|.|.+|+.+.|+
T Consensus 5 yvitT~DG~~IvT~GKP~~D--------~dTGm~sY~D~~G~~~qIn 43 (61)
T 2rb6_A 5 YIMSTKDGKMITSDSKPKLD--------KTTGMYLYYDEDGREVMIK 43 (61)
T ss_dssp EEEEETTSCEEEESSCCEEE--------TTTTEEEEECTTSCEEEEE
T ss_pred EEEEeCCCcEEEcCCCcccc--------CCCCCEEEEcCCCCEEEEc
Confidence 34467788877766665521 3489999999999998875
No 5
>2jn0_A Hypothetical lipoprotein YGDR; solution structure, PSI-2 target, structural genomics, protein structure initiative; NMR {Escherichia coli} SCOP: b.38.1.6 PDB: 3fif_A
Probab=83.19 E-value=1.6 Score=27.91 Aligned_cols=38 Identities=21% Similarity=0.356 Sum_probs=27.7
Q ss_pred EEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 35 AFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 35 ~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
--.+.||..-...|.++-. .-.|.|+|.|.+|+.+.|+
T Consensus 6 vitT~DG~~IvT~GKP~~D--------~dTGm~sY~D~~G~~~qIn 43 (61)
T 2jn0_A 6 VMATKDGRMILTDGKPEID--------DDTGLVSYHDQQGNAMQIN 43 (61)
T ss_dssp EEEETTSCEEEBCCCCEEE--------TTTTEEEEEBTTSCEEEEE
T ss_pred EEEeCCCcEEEcCCCcccc--------CCCCCEEEEcCCCCEEEEc
Confidence 3457778776666655421 3589999999999998875
No 6
>2ra2_A Putative lipoprotein; X-RAY, NESG, STR88A, Q7CPV8, structural genomics, PSI-2, protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.38.1.6
Probab=82.17 E-value=1.4 Score=28.34 Aligned_cols=39 Identities=21% Similarity=0.429 Sum_probs=28.0
Q ss_pred eEEEcCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEE
Q psy10193 34 FAFETGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 34 f~Ye~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~ 80 (135)
|--.+.||..-...|..+-. .-.|.|+|.|.+|+.+.|+
T Consensus 6 yVitt~DG~~IvT~GKP~~D--------~dTGm~sY~D~~G~~~qIn 44 (64)
T 2ra2_A 6 YVMHTNDGRSIVTDGKPQTD--------NDTGMISYKDANGNKQQIN 44 (64)
T ss_dssp EEEEETTSCEEECSSCCEEC--------TTTCSEEEECTTSCEEEEC
T ss_pred EEEEeCCCcEEEcCCCcccc--------CCCCCEEEEcCCCCEEEEc
Confidence 44467788876666655421 3589999999999988764
No 7
>3p34_A Serine/threonine-protein kinase PLK1; phosphoprotein binding domain, PLK1, kinase, transferase; HET: TPO; 1.40A {Homo sapiens} PDB: 3p2z_A* 3p2w_A* 3p35_A* 3p36_A* 3p37_A* 3q1i_A* 4e67_A* 4e9c_A* 4e9d_A* 2ogq_A 2ojs_A* 2ojx_A 3bzi_A* 3mhn_A* 3mhq_A 3mq8_B* 4h5x_B 4h70_B* 4h71_B* 4hco_B* ...
Probab=52.33 E-value=25 Score=27.51 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=26.3
Q ss_pred CeeeEEEcCCCceEEEeeeeecCCccccccc-eeeeEEEEECCCCcE
Q psy10193 31 TYKFAFETGNGIAVQEQGALKNAGQKDLEAQ-TAQGQSSYTSPDGTP 76 (135)
Q Consensus 31 ~Y~f~Ye~~dG~~~~E~G~~k~~G~~~~~~~-~v~GsYsy~~pDG~~ 76 (135)
.|-|+|..+||. .|.+.|.++ .-.+ .-...+.|+..+|+.
T Consensus 58 KYG~GYqLsdgs----vGVlFND~T--~mil~~~~~~v~Y~~~~~~~ 98 (232)
T 3p34_A 58 KYGLGYQLCDNS----VGVLFNDST--RLILYNDGDSLQYIERDGTE 98 (232)
T ss_dssp TTEEEEEETTSC----EEEEETTSC--EEEECTTSSEEEEECTTCCE
T ss_pred ccceEEEecCCc----EEEEEcCCc--eEEEcCCCceEEEEcCCCcE
Confidence 588999999999 699998876 1111 123445555555543
No 8
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=45.48 E-value=51 Score=23.31 Aligned_cols=21 Identities=19% Similarity=0.257 Sum_probs=17.6
Q ss_pred cceeeeEEEEECCCCcEEEEE
Q psy10193 60 AQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 60 ~~~v~GsYsy~~pDG~~~~V~ 80 (135)
...++|+|.++++||....|.
T Consensus 93 ~G~M~G~y~m~~~~G~~F~v~ 113 (126)
T 1xvs_A 93 VGVMQGQYLMIDEQGESFTVE 113 (126)
T ss_dssp EEEEEEEEEEECTTSCEEEEE
T ss_pred cEEEEEEEEEEECCCCEEEEE
Confidence 458999999999999977654
No 9
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=44.17 E-value=47 Score=23.47 Aligned_cols=21 Identities=24% Similarity=0.322 Sum_probs=17.5
Q ss_pred cceeeeEEEEECCCCcEEEEE
Q psy10193 60 AQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 60 ~~~v~GsYsy~~pDG~~~~V~ 80 (135)
...++|+|.++++||....|.
T Consensus 94 ~G~M~G~y~m~~~~G~~F~v~ 114 (127)
T 2f1e_A 94 QGQMQGHYDMVADDGTEFIAP 114 (127)
T ss_dssp CEEEEEEEEEEETTCCEEEEE
T ss_pred cEEEEEEEEEEECCCCEEEEE
Confidence 458999999999999877654
No 10
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=42.02 E-value=44 Score=23.94 Aligned_cols=21 Identities=14% Similarity=0.107 Sum_probs=17.6
Q ss_pred cceeeeEEEEECCCCcEEEEE
Q psy10193 60 AQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 60 ~~~v~GsYsy~~pDG~~~~V~ 80 (135)
...++|+|.++++||....|.
T Consensus 93 ~G~M~G~y~m~~~~G~~F~v~ 113 (134)
T 1tza_A 93 FGIMYGTYGMVSESGEHFNAI 113 (134)
T ss_dssp EEEEEEEEEEEETTCCEEEEE
T ss_pred ceEEEEEEEEEECCCCEEEEE
Confidence 458999999999999877654
No 11
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=41.61 E-value=49 Score=23.86 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=17.4
Q ss_pred cceeeeEEEEECCCCcEEEEE
Q psy10193 60 AQTAQGQSSYTSPDGTPIQTQ 80 (135)
Q Consensus 60 ~~~v~GsYsy~~pDG~~~~V~ 80 (135)
...++|+|.++++||....|.
T Consensus 98 ~G~M~G~y~m~~~~G~~F~v~ 118 (139)
T 1xq4_A 98 IGTMRGTYHCVGENGIPFEVP 118 (139)
T ss_dssp EEEEEEEEEEEETTSCEEEEE
T ss_pred ceEEEEEEEEEeCCCCEEEEE
Confidence 458999999999999876654
No 12
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=37.85 E-value=25 Score=27.58 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=25.8
Q ss_pred eCCCCcccccCCCCCCCCCCHHHHHHHHhcccc
Q psy10193 83 ADETGYHASGAHLPTPPPIPDEIAKAIATLPKL 115 (135)
Q Consensus 83 ADenGf~p~g~~lP~pPpip~~i~~al~~~~~~ 115 (135)
-++|||-|.|...=...+||++|..|.+.+.++
T Consensus 221 ~~~~gYgp~~~gf~~~~~iP~~V~~A~~~l~~~ 253 (266)
T 3ca8_A 221 DDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHD 253 (266)
T ss_dssp CSTTSSSTTTTCSSCCCCCCHHHHHHHHHHHTC
T ss_pred hcccccCccCCCccccCcCCHHHHHHHHHHHHh
Confidence 568999998765555567999999999887654
No 13
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=37.40 E-value=22 Score=23.34 Aligned_cols=18 Identities=28% Similarity=0.254 Sum_probs=14.4
Q ss_pred eeEEEEECCCCcEEEEEEE
Q psy10193 64 QGQSSYTSPDGTPIQTQWY 82 (135)
Q Consensus 64 ~GsYsy~~pDG~~~~V~Yt 82 (135)
.|.| +.||||..+++...
T Consensus 116 ~g~~-~~DPdG~~iel~~~ 133 (139)
T 1twu_A 116 GGVT-IEDPDGWRIVFMNS 133 (139)
T ss_dssp SEEE-EECTTCCEEEEESS
T ss_pred CCeE-EECCCCCEEEEEEc
Confidence 4567 99999999988654
No 14
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=34.24 E-value=35 Score=22.65 Aligned_cols=17 Identities=24% Similarity=0.503 Sum_probs=13.8
Q ss_pred EEEEECCCCcEEEEEEE
Q psy10193 66 QSSYTSPDGTPIQTQWY 82 (135)
Q Consensus 66 sYsy~~pDG~~~~V~Yt 82 (135)
+..+.||||..+++.|-
T Consensus 117 ~~~f~DPDGn~iEi~~~ 133 (149)
T 4gym_A 117 GRSFHDLDGHLWEVMWM 133 (149)
T ss_dssp EEEEECTTCCEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEE
Confidence 34578999999999874
No 15
>1q4k_B Serine/threonine-protein kinase PLK; six-stranded anti-parallel beta sheet with one alpha helix, transferase; HET: TPO; 2.30A {Homo sapiens} SCOP: d.223.1.2 d.223.1.2
Probab=33.64 E-value=75 Score=24.99 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=18.2
Q ss_pred CeeeEEEcCCCceEEEeeeeecCCc
Q psy10193 31 TYKFAFETGNGIAVQEQGALKNAGQ 55 (135)
Q Consensus 31 ~Y~f~Ye~~dG~~~~E~G~~k~~G~ 55 (135)
.|-|+|..+||. .|.+.|.++
T Consensus 76 KYG~GYqLsdgs----vGvlFND~T 96 (259)
T 1q4k_B 76 KYGLGYQLCDNS----VGVLFNDST 96 (259)
T ss_dssp TTEEEEEETTSC----EEEEETTSC
T ss_pred ccceeEEecCCc----EEEEEeCCc
Confidence 488999999999 788988775
No 16
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=32.89 E-value=85 Score=23.88 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=17.4
Q ss_pred cccceeeeEEEEECCCCcEEEEEEE
Q psy10193 58 LEAQTAQGQSSYTSPDGTPIQTQWY 82 (135)
Q Consensus 58 ~~~~~v~GsYsy~~pDG~~~~V~Yt 82 (135)
..++.++|.| .||+||+++.+.+.
T Consensus 142 ~~g~~~R~tF-iIDp~g~Ir~~~~~ 165 (219)
T 3tue_A 142 SQGVAYRGLF-IIDPHGMLRQITVN 165 (219)
T ss_dssp TTTEECEEEE-EECTTSBEEEEEEE
T ss_pred CCCeeEEEEE-EECCCCeEEEEEEe
Confidence 3456778886 68999998887644
No 17
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=28.62 E-value=45 Score=20.90 Aligned_cols=23 Identities=13% Similarity=0.263 Sum_probs=17.2
Q ss_pred eccCCCCCCeeeEEEcCCCceEE
Q psy10193 23 VNEPPVDGTYKFAFETGNGIAVQ 45 (135)
Q Consensus 23 ~~~~~~dG~Y~f~Ye~~dG~~~~ 45 (135)
+...+.+|.|.|.+...||...-
T Consensus 4 ei~~~~~G~frfrLka~NGevI~ 26 (64)
T 3bid_A 4 EIYKDAKGEYRWRLKAANHEIIA 26 (64)
T ss_dssp EEEECTTSCEEEEEECTTSCEEE
T ss_pred EEEECCCCCEEEEEEeCCCCEEE
Confidence 33456788999999988887654
No 18
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=28.45 E-value=52 Score=21.11 Aligned_cols=20 Identities=15% Similarity=0.365 Sum_probs=16.6
Q ss_pred EEEEECCCCcEEEEEEEeCC
Q psy10193 66 QSSYTSPDGTPIQTQWYADE 85 (135)
Q Consensus 66 sYsy~~pDG~~~~V~YtADe 85 (135)
+..+.||||..+++....|+
T Consensus 112 ~~~~~DPdGn~iel~~~~~~ 131 (135)
T 3rri_A 112 TFFLIDPSNNLLEFKYYFDD 131 (135)
T ss_dssp EEEEECTTCCEEEEEEESSG
T ss_pred EEEEECCCCCEEEEEEECCh
Confidence 56788999999999877764
No 19
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=26.09 E-value=72 Score=24.30 Aligned_cols=47 Identities=15% Similarity=-0.031 Sum_probs=21.6
Q ss_pred EECCCCcEEEEEEEeCCCCcccccCCCCCCCCCCHHHHHHHHhccc-----ccCCCCCCCCCC
Q psy10193 69 YTSPDGTPIQTQWYADETGYHASGAHLPTPPPIPDEIAKAIATLPK-----LVEENYAPNPQP 126 (135)
Q Consensus 69 y~~pDG~~~~V~YtADenGf~p~g~~lP~pPpip~~i~~al~~~~~-----~p~~~~~~~~~~ 126 (135)
.+|+||+++.+....+ +...|-.++++++|..+.. .|+.-++.+.+.
T Consensus 142 vID~dG~I~~~~~~~~-----------~~~~pd~~evl~~L~~l~~~~~~~~~~~~~~~~~~~ 193 (224)
T 3keb_A 142 LADAANVVHYSERLAN-----------TRDFFDFDAIEKLLQEGEQQAMAAEREAAEARQEQD 193 (224)
T ss_dssp EECTTCBEEEEEECSB-----------TTCCCCHHHHHHHHHHHHHHC---------------
T ss_pred EEcCCCEEEEEEecCC-----------CCCCCCHHHHHHHHHHhhhcccccChhhhhhhhhhh
Confidence 5678888776554433 2223446788888876643 444445555544
No 20
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=25.25 E-value=1.5e+02 Score=23.78 Aligned_cols=53 Identities=13% Similarity=0.198 Sum_probs=34.8
Q ss_pred cCCCceEEEeeeeecCCccccccceeeeEEEEECCCCcEEEEEEEeCCC--Cccc
Q psy10193 38 TGNGIAVQEQGALKNAGQKDLEAQTAQGQSSYTSPDGTPIQTQWYADET--GYHA 90 (135)
Q Consensus 38 ~~dG~~~~E~G~~k~~G~~~~~~~~v~GsYsy~~pDG~~~~V~YtADen--Gf~p 90 (135)
..||++....=.+........-...-+-|-||+-.-.+.+.|.|+.|.+ =||.
T Consensus 38 ~aNGVkpS~~~~v~~p~~~kav~~~~~Hsisytlsr~~~VvVeY~~D~~tDMFQI 92 (263)
T 3ega_A 38 KANGVKPSTVHMISTPQASKAISCKGQHSISYTLSRNQTVVVEYTHDKDTDMFQV 92 (263)
T ss_dssp SCCEEEEEEEEEEECCTTCCCCCBTTBEEEEEECSSSEEEEEEEEEETTEEEEEE
T ss_pred ccCCccccceEEecCcccchhhhccccceEEEEecCCceeeeeeecCCCcchhhh
Confidence 4678876554444322210011124588999999999999999999964 5665
No 21
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=21.32 E-value=1.6e+02 Score=22.20 Aligned_cols=24 Identities=17% Similarity=0.165 Sum_probs=16.8
Q ss_pred ccceeeeEEEEECCCCcEEEEEEEe
Q psy10193 59 EAQTAQGQSSYTSPDGTPIQTQWYA 83 (135)
Q Consensus 59 ~~~~v~GsYsy~~pDG~~~~V~YtA 83 (135)
.++..+|.| .||+||+++.+.+..
T Consensus 139 ~g~~~R~tF-iID~~G~Ir~~~v~~ 162 (216)
T 3sbc_A 139 EGVALRGLF-IIDPKGVIRHITIND 162 (216)
T ss_dssp TTEECEEEE-EECTTSBEEEEEEEC
T ss_pred CCceeeEEE-EECCCCeEEEEEEcC
Confidence 345677775 589999887766543
Done!