BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10208
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V7Y2|SGPL_DROME Sphingosine-1-phosphate lyase OS=Drosophila melanogaster GN=Sply
PE=2 SV=1
Length = 545
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 110/141 (78%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
Y+ T+ I++T +YIE+ +R +DG+FIFG PATSVIALGS+VF I+RLS L K GWN N
Sbjct: 405 YLEATKRIVDTARYIERGVRDIDGIFIFGKPATSVIALGSNVFDIFRLSDSLCKLGWNLN 464
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
+LQFP GIH+C+T MHTQPGVADKFI+DVR A IM++PG + G MA+YG + SIPDR
Sbjct: 465 ALQFPSGIHLCVTDMHTQPGVADKFIADVRSCTAEIMKDPGQPVVGKMALYGMAQSIPDR 524
Query: 123 SIIGDFTRYYIDATYYTPDSK 143
S+IG+ TR ++ + YYTP K
Sbjct: 525 SVIGEVTRLFLHSMYYTPSQK 545
>sp|Q5R4G0|SGPL1_PONAB Sphingosine-1-phosphate lyase 1 OS=Pongo abelii GN=SGPL1 PE=2 SV=1
Length = 568
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
YV T+ II+T ++++ EL ++ G+F+FG P SVIALGS F IYRLS+ + +GWN N
Sbjct: 416 YVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLN 475
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
LQFP IH CIT +H + VA +F+ D+RE + IM+NP + G+ A+YG + + DR
Sbjct: 476 QLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDR 535
Query: 123 SIIGDFTRYYIDATYYT 139
+++ + + ++D+ Y T
Sbjct: 536 NMVAELSSVFLDSLYST 552
>sp|O95470|SGPL1_HUMAN Sphingosine-1-phosphate lyase 1 OS=Homo sapiens GN=SGPL1 PE=1 SV=3
Length = 568
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
YV T+ II+T ++++ EL ++ G+F+FG P SVIALGS F IYRLS+ + +GWN N
Sbjct: 416 YVEATKQIIKTARFLKSELENIKGIFVFGNPQLSVIALGSRDFDIYRLSNLMTAKGWNLN 475
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
LQFP IH CIT +H + VA +F+ D+RE + IM+NP + G+ A+YG + + DR
Sbjct: 476 QLQFPPSIHFCITLLHARKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQTTVDR 535
Query: 123 SIIGDFTRYYIDATYYT 139
+++ + + ++D+ Y T
Sbjct: 536 NMVAELSSVFLDSLYST 552
>sp|Q8R0X7|SGPL1_MOUSE Sphingosine-1-phosphate lyase 1 OS=Mus musculus GN=Sgpl1 PE=2 SV=1
Length = 568
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 92/137 (67%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
YV T+ II+T ++++ EL ++ +FIFG P SVIALGS+ F IYRLS+ ++ +GWN N
Sbjct: 416 YVEATKQIIKTARFLKSELENIKNIFIFGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFN 475
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
LQFP IH CIT +HT+ VA +F+ D+RE + IM+NP + G+ A+YG + + DR
Sbjct: 476 YLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQATIDR 535
Query: 123 SIIGDFTRYYIDATYYT 139
++ + + ++D Y T
Sbjct: 536 KLVAEISSVFLDCLYTT 552
>sp|Q8CHN6|SGPL1_RAT Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus GN=Sgpl1 PE=2
SV=1
Length = 568
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
YV T+ II+T ++++ EL ++ +FI G P SVIALGS+ F IYRLS+ ++ +GWN N
Sbjct: 416 YVEATKQIIKTARFLKSELENIKNIFILGDPQLSVIALGSNDFDIYRLSNMMSAKGWNFN 475
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
LQFP IH CIT +HT+ VA +F+ D+RE + IM+NP + G+ A+YG + + DR
Sbjct: 476 YLQFPRSIHFCITLVHTRKRVAIQFLKDIRESVTQIMKNPKAKTTGMGAIYGMAQATIDR 535
Query: 123 SIIGDFTRYYIDATYYT 139
++ + + ++D+ Y T
Sbjct: 536 KMVAEISSVFLDSLYST 552
>sp|Q9C509|SGPL_ARATH Sphingosine-1-phosphate lyase OS=Arabidopsis thaliana GN=At1g27980
PE=2 SV=1
Length = 544
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
Y+ T I+E K +E+ +R + LF+ G P +++A GS I+ ++ ++ +GW+ N
Sbjct: 412 YLQNTSKIMEASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLN 471
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
+LQ P IHICIT H V D F+ D+RE + + NPG G+ +YG + +PDR
Sbjct: 472 ALQRPNSIHICITLQHVP--VVDDFLRDLREAVETVKANPGPITGGLAPIYGAAGKMPDR 529
Query: 123 SIIGDFTRYYIDATY 137
++ + ++D+ Y
Sbjct: 530 GMVNELLVSFMDSQY 544
>sp|Q52RG7|SGPL_ORYSJ Sphingosine-1-phosphate lyase OS=Oryza sativa subsp. japonica
GN=SPL PE=2 SV=2
Length = 539
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
Y+ T I+E K I++ + + GLF+ G P +V+A GSD I+ ++ ++ +GW+ N
Sbjct: 407 YMENTGHIMEVSKKIQRGIEDIPGLFVIGKPDMTVVAFGSDSVDIFEVNDIMSSKGWHLN 466
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKSHSIPDR 122
+LQ P +HIC+T HT + ++F+ D+++ + + NPG G +YG + +PDR
Sbjct: 467 ALQRPNSLHICVTLQHTV--IYEEFLKDLKDSVDTVKANPGPISGGRAPIYGAAGKMPDR 524
Query: 123 SIIGDFTRYYIDAT 136
++ + ++DA+
Sbjct: 525 GMVRELLVEFMDAS 538
>sp|Q54RV9|SGPL_DICDI Sphingosine-1-phosphate lyase OS=Dictyostelium discoideum GN=sglA
PE=2 SV=1
Length = 528
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
++ + ++ET K I K L+S++G+ I G P V+A D +I+ ++ ++K+GW+ N
Sbjct: 387 FLEKAKGVMETTKKIIKGLQSINGVKIIGDPKAMVVAFTCD--NIFYVNDYMSKKGWHLN 444
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVREELAIIMQNPG-LQLEGVMAMYGKSHSIPD 121
+LQ P +H+C+T G+ FI D+++ + ++ N G L +G +YG +HS+PD
Sbjct: 445 ALQRPNSLHVCVTAKMI--GMESLFIEDLKDSIKLVKDNSGSLPKDGTAPIYGSAHSVPD 502
Query: 122 RSIIGDFTRYYIDATYYTPDSK 143
R ++G +ID TPD K
Sbjct: 503 REMVGTILSDFID-ELITPDYK 523
>sp|Q9Y194|SGPL_CAEEL Sphingosine-1-phosphate lyase OS=Caenorhabditis elegans GN=spl-1
PE=1 SV=1
Length = 552
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 3 YVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNTN 62
YV I++ + + +++ + + +G S++A + +IY +S + K GWN N
Sbjct: 410 YVRRCAQIVKHTRMLAEKIEKIKWIKPYGKSDVSLVAFSGNGVNIYEVSDKMMKLGWNLN 469
Query: 63 SLQFPVGIHICITHMHTQPGVADKFISDVR---EELAIIMQNPGLQLEGVMAMYGKSHSI 119
+LQ P IHIC+T V + F D+ EELA + G+ AMYG + +
Sbjct: 470 TLQNPAAIHICLTINQANEEVVNAFAVDLEKICEELAAKGEQKADS--GMAAMYGMAAQV 527
Query: 120 PDRSIIGDFTRYYIDATYYTPDS 142
P +S++ + YIDATY P S
Sbjct: 528 P-KSVVDEVIALYIDATYSAPPS 549
>sp|Q5ZTI6|SGPL_LEGPH Probable sphingosine-1-phosphate lyase OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=lpg2176 PE=3 SV=2
Length = 601
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 16/155 (10%)
Query: 3 YVNTTRSIIETVKYIEKELRSM---------DGLFIFGTPATSVIALGSDVFHIYRLSSG 53
Y +SII I+KEL ++ + ++++G P S++ S+ + + ++
Sbjct: 423 YQEIAKSIITLRNAIQKELTTLLEEGNGLTSEDIYVYGNPQWSILGFRSNTCNAHFIADE 482
Query: 54 LNKRGWNTNSLQFPVGIHICITHMHTQ-PGVADKFISDVREELAIIMQN--PGLQLEGVM 110
L KRGW N LQ P G H+C+TH+HT G +FI D+RE + I ++N PG + G +
Sbjct: 483 LEKRGWKLNLLQNPDGFHLCLTHVHTLVKGFETQFIKDLREAV-IDVKNYPPGKKPSGNV 541
Query: 111 AMYGKSHSIP---DRSIIGDFTRYYIDATYYTPDS 142
+YG +P R I + + ++ T +P S
Sbjct: 542 KVYGAVGMMPIELQREICKQYQKARLNYTSASPGS 576
>sp|Q5WUR6|SGPL_LEGPL Probable sphingosine-1-phosphate lyase OS=Legionella pneumophila
(strain Lens) GN=lpl2102 PE=3 SV=1
Length = 605
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 3 YVNTTRSIIETVKYIEKELRSM---------DGLFIFGTPATSVIALGSDVFHIYRLSSG 53
Y +SII+ I+KEL ++ + ++++G P S++ S+ + + ++
Sbjct: 423 YQEIAKSIIKLRNAIQKELTALVEEGNGLTSEDIYVYGNPQWSILGFRSNTCNAHFIADE 482
Query: 54 LNKRGWNTNSLQFPVGIHICITHMHTQ-PGVADKFISDVREELAIIMQN--PGLQLEGVM 110
L KRGW N LQ P G H+C+TH+HT G +FI D+RE + I ++N PG + G +
Sbjct: 483 LEKRGWKLNLLQNPDGFHLCLTHVHTLVRGFETQFIKDLREAV-IDVKNYPPGKKASGNV 541
Query: 111 AMYGKSHSIP---DRSIIGDFTRYYIDAT 136
+YG +P + I + + +D T
Sbjct: 542 KVYGAVGMMPIELQKEICKQYQKARLDFT 570
>sp|Q5X3A8|SGPL_LEGPA Probable sphingosine-1-phosphate lyase OS=Legionella pneumophila
(strain Paris) GN=lpp2128 PE=3 SV=1
Length = 605
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 16/149 (10%)
Query: 3 YVNTTRSIIETVKYIEKELRSM---------DGLFIFGTPATSVIALGSDVFHIYRLSSG 53
Y +SII I+KEL ++ + ++++G P S++ S+ + + ++
Sbjct: 423 YQEIAKSIIRLRNAIQKELTALVEEGNGLTSEDIYVYGNPQWSILGFRSNTCNAHFIADE 482
Query: 54 LNKRGWNTNSLQFPVGIHICITHMHTQPGVAD-KFISDVREELAIIMQN--PGLQLEGVM 110
L KRGW N LQ P G H+C+TH+HT G + +FI D+RE + I ++N PG + G +
Sbjct: 483 LEKRGWKLNLLQNPDGFHLCLTHVHTLVGSFETQFIKDLREAV-IDVKNYPPGKKPSGNV 541
Query: 111 AMYGKSHSIP---DRSIIGDFTRYYIDAT 136
+YG +P + I + + +D T
Sbjct: 542 KVYGAVGMMPVELQKEICKQYQKARLDFT 570
>sp|Q05567|SGPL_YEAST Sphingosine-1-phosphate lyase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DPL1 PE=1 SV=1
Length = 589
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 3 YVNTTRSIIETV----KYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRG 58
Y+ + + I+ KYI++ + ++ I G P SVI+ S +I+ LS L+K+G
Sbjct: 443 YIESCQEIVGAAMKFKKYIQENIPDLN---IMGNPRYSVISFSSKTLNIHELSDRLSKKG 499
Query: 59 WNTNSLQFPVGIHICITHM--HTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYGKS 116
W+ N+LQ PV +H+ T + H + D + V+E + P +G A+YG +
Sbjct: 500 WHFNALQKPVALHMAFTRLSAHVVDEICDILRTTVQELKSESNSKP--SPDGTSALYGVA 557
Query: 117 HSIPDRSIIGDFTRYYIDATY 137
S+ + ++DA Y
Sbjct: 558 GSVKTAGVADKLIVGFLDALY 578
>sp|Q9TZL0|TBX31_CAEEL Putative T-box protein 31 OS=Caenorhabditis elegans GN=tbx-31 PE=4
SV=1
Length = 747
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Query: 56 KRGWNTNSLQFPVGIHICITHMHTQPGVADKFI-SDVREELAIIMQNPGLQLEGVMAMYG 114
K+ + N ++PV I+ IT G + S + I + G +EGV+ +
Sbjct: 665 KKDFPENVNKYPVAINSLITEAIASNGTNQVLLTSKYPSDCTIRFRKCGFMIEGVLVVKK 724
Query: 115 KSHSIPDRSIIGDFTR 130
K I DR I+G+ R
Sbjct: 725 KETVIIDRQILGELNR 740
>sp|Q54IJ3|GADB_DICDI Glutamate decarboxylase B OS=Dictyostelium discoideum GN=gadB PE=2
SV=1
Length = 463
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 16 YIEKELRSMDGLFIF---GTPATSVIAL-------GSDVFHIYRLSSGLNKRGWNTNSLQ 65
+I KEL+ M G+F GT A + +F++Y LS L RGW S
Sbjct: 348 FIGKELKKM-GIFDLIYDGTGALPGVCWTISKNLPSEPLFNLYDLSEKLRSRGWQVASYS 406
Query: 66 FPVGIH------ICITHMHTQPGVADKFISDVREELAIIMQNPGLQ 105
P ++ + I H ++ ++ F+ DV+ + ++P L+
Sbjct: 407 LPSSMNDVVVSRVVIRHGFSR-DLSSLFVKDVQNAIEYFQKHPILR 451
>sp|Q4L885|ECFA1_STAHJ Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=ecfA1 PE=3 SV=1
Length = 270
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Query: 68 VGIHICI--THMHTQPGVADKFISDVREELAIIMQNPGLQLEGVMAMYG-----KSHSIP 120
VGI I T + Q +++ D+RE + I+ QNP Q G + Y ++H++P
Sbjct: 57 VGIEIATNGTIIFNQSPISNNDFKDIREHVGIVFQNPENQFVGSIVKYDVAFGLENHAVP 116
>sp|Q8Z2H1|COAD_SALTI Phosphopantetheine adenylyltransferase OS=Salmonella typhi GN=coaD
PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B5BI08|COAD_SALPK Phosphopantetheine adenylyltransferase OS=Salmonella paratyphi A
(strain AKU_12601) GN=coaD PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|Q5PC10|COAD_SALPA Phosphopantetheine adenylyltransferase OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=coaD PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|A9MKP0|COAD_SALAR Phosphopantetheine adenylyltransferase OS=Salmonella arizonae
(strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=coaD PE=3
SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|Q81E30|SYI2_BACCR Isoleucine--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=ileS2 PE=3 SV=2
Length = 1033
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 31 GTPATSVIALGSDVFHIYRLSSGLNKRGWNTNSLQFPVGIHICITHMHTQPGVADKFISD 90
TP V+ G DV SG + NT + Q+ V + +T Q GVA +FI
Sbjct: 905 ATPEGEVVVTGEDVLVEKVAKSGFS----NTTNGQYTVMLDTNVTEELLQEGVAREFIRA 960
Query: 91 VRE 93
V+E
Sbjct: 961 VQE 963
>sp|B5EXD9|COAD_SALA4 Phosphopantetheine adenylyltransferase OS=Salmonella agona (strain
SL483) GN=coaD PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|Q8ZL48|COAD_SALTY Phosphopantetheine adenylyltransferase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=coaD PE=3 SV=1
Length = 159
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B4TZX6|COAD_SALSV Phosphopantetheine adenylyltransferase OS=Salmonella schwarzengrund
(strain CVM19633) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|A9MVM9|COAD_SALPB Phosphopantetheine adenylyltransferase OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B4SXD6|COAD_SALNS Phosphopantetheine adenylyltransferase OS=Salmonella newport
(strain SL254) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B4T9B9|COAD_SALHS Phosphopantetheine adenylyltransferase OS=Salmonella heidelberg
(strain SL476) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B5RGF3|COAD_SALG2 Phosphopantetheine adenylyltransferase OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B5R5F8|COAD_SALEP Phosphopantetheine adenylyltransferase OS=Salmonella enteritidis
PT4 (strain P125109) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|B5FM58|COAD_SALDC Phosphopantetheine adenylyltransferase OS=Salmonella dublin (strain
CT_02021853) GN=coaD PE=3 SV=1
Length = 159
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 86 KFISDVREELAIIMQNPGL--QLEGVMAMYGKSHSIPDRSIIGDFTRYYIDATYYTPDS 142
+ ++D E+ + N L QLE V M K S S++ + R+ D T++ PD+
Sbjct: 91 RAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDN 149
>sp|Q5JJ82|MFNA_PYRKO L-tyrosine decarboxylase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=mfnA PE=3 SV=1
Length = 384
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/96 (18%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 2 SYVNTTRSIIETVKYIEKELRSMDGLFIFGTPATSVIALGSDVFHIYRLSSGLNKRGWNT 61
Y + +E ++ EL+ + G+++ P ++++ GS+ RGW
Sbjct: 293 GYKEVVKEKMELARWFASELKKIPGIYLIREPVLNIVSFGSEKLEELEKEL--KARGWGV 350
Query: 62 NS----LQFPVGIHICITHMHTQPGVADKFISDVRE 93
++ ++ V H+ H+ ++F+ D+RE
Sbjct: 351 SAHRGYIRIVVMPHVKREHL-------EEFLRDLRE 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,838,988
Number of Sequences: 539616
Number of extensions: 2080957
Number of successful extensions: 3946
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 3927
Number of HSP's gapped (non-prelim): 32
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)