BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10209
(106 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9U6A1|PROS_DROVI Homeobox protein prospero OS=Drosophila virilis GN=pros PE=3 SV=1
Length = 1556
Score = 176 bits (445), Expect = 5e-44, Method: Composition-based stats.
Identities = 83/106 (78%), Positives = 92/106 (86%), Gaps = 5/106 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQAV+EG+ +DL ++G+ E+YRVLNLHYNRNNHIEV P NFRFV+EQTL
Sbjct: 1456 MEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEV-----PQNFRFVVEQTL 1510
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQLE 106
REFF+AIQ GKD E SWKKSIYKIISRMDDPVPEYFKSPNFLEQLE
Sbjct: 1511 REFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQLE 1556
>sp|P29617|PROS_DROME Homeobox protein prospero OS=Drosophila melanogaster GN=pros PE=1
SV=3
Length = 1703
Score = 172 bits (436), Expect = 6e-43, Method: Composition-based stats.
Identities = 82/106 (77%), Positives = 91/106 (85%), Gaps = 5/106 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQAV+EG+ +DL ++G+ E+YRVLNLHYNRNNHIEV P NFRFV+E TL
Sbjct: 1603 MEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEV-----PQNFRFVVESTL 1657
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQLE 106
REFF+AIQ GKD E SWKKSIYKIISRMDDPVPEYFKSPNFLEQLE
Sbjct: 1658 REFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFLEQLE 1703
>sp|P34522|HM26_CAEEL Homeobox protein ceh-26 OS=Caenorhabditis elegans GN=ceh-26 PE=3
SV=2
Length = 594
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 82/106 (77%), Gaps = 5/106 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEK+ARQA++EG+ D+ VS + E+++VLN HYNRNNHI + P FV+++TL
Sbjct: 493 MEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHI-----KAPDRLVFVVQETL 547
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQLE 106
REF AI+ GKD EPSWKK+IYK+I+R++D +P++FK PNFLE+LE
Sbjct: 548 REFHDAIKQGKDIEPSWKKTIYKVINRLEDQIPDFFKEPNFLERLE 593
>sp|P48437|PROX1_MOUSE Prospero homeobox protein 1 OS=Mus musculus GN=Prox1 PE=1 SV=2
Length = 737
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQA+++GV E+L ++ +CE+YR LN+HYN+ N EV P F V + TL
Sbjct: 635 MEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV-----PERFLEVAQITL 689
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 105
REFF AI GKD +PSWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 690 REFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
>sp|Q92786|PROX1_HUMAN Prospero homeobox protein 1 OS=Homo sapiens GN=PROX1 PE=1 SV=2
Length = 737
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQA+++GV E+L ++ +CE+YR LN+HYN+ N EV P F V + TL
Sbjct: 635 MEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV-----PERFLEVAQITL 689
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 105
REFF AI GKD +PSWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 690 REFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 734
>sp|Q91018|PROX1_CHICK Prospero homeobox protein 1 OS=Gallus gallus GN=PROX1 PE=2 SV=1
Length = 736
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQA+++GV E+L ++ +CE+YR LN+HYN+ N EV P F V + TL
Sbjct: 634 MEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEV-----PERFLEVAQITL 688
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 105
REFF AI GKD +PSWKK+IYK+I ++D VPE FKSPN L++L
Sbjct: 689 REFFNAIIAGKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQEL 733
>sp|Q8BII1|PROX2_MOUSE Prospero homeobox protein 2 OS=Mus musculus GN=Prox2 PE=2 SV=1
Length = 593
Score = 109 bits (272), Expect = 5e-24, Method: Composition-based stats.
Identities = 55/105 (52%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEKYARQA+S+G+ +A+ L V + E++RVLN HYN+ N EV P F + TL
Sbjct: 491 MEKYARQALSDGITNAQALAVLRDSELFRVLNTHYNKGNDFEV-----PDCFLEIAALTL 545
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNFLEQL 105
+EFF+A+ GKD +PSWKK IYK+IS++D VPE KSP+FL L
Sbjct: 546 KEFFRAVLAGKDSDPSWKKPIYKVISKLDSDVPEMLKSPSFLPGL 590
>sp|Q3B8N5|PROX2_HUMAN Prospero homeobox protein 2 OS=Homo sapiens GN=PROX2 PE=2 SV=3
Length = 592
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 68/101 (67%), Gaps = 5/101 (4%)
Query: 1 MEKYARQAVSEGVLHAEDLHVSGECEIYRVLNLHYNRNNHIEVCGPQVPTNFRFVIEQTL 60
MEK ARQA+S+GV + + L V E+++ LN+HYN+ N EV P F + TL
Sbjct: 495 MEKSARQAISDGVTNPKMLVVLRNSELFQALNMHYNKGNDFEV-----PDCFLEIASLTL 549
Query: 61 REFFKAIQDGKDQEPSWKKSIYKIISRMDDPVPEYFKSPNF 101
+EFF+A+ G+D +PSWKK IYKIIS++D +PE FKS ++
Sbjct: 550 QEFFRAVSAGRDSDPSWKKPIYKIISKLDSDIPEIFKSSSY 590
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,345,166
Number of Sequences: 539616
Number of extensions: 1679234
Number of successful extensions: 3387
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3371
Number of HSP's gapped (non-prelim): 11
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)