Query psy10210
Match_columns 435
No_of_seqs 448 out of 3406
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 20:40:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/10210hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1383|consensus 100.0 1.3E-57 2.9E-62 434.3 33.1 370 54-431 3-375 (491)
2 COG0076 GadB Glutamate decarbo 100.0 7.9E-44 1.7E-48 357.0 30.0 323 102-429 28-361 (460)
3 PF00282 Pyridoxal_deC: Pyrido 100.0 8.6E-41 1.9E-45 329.7 28.6 317 103-428 8-353 (373)
4 TIGR01788 Glu-decarb-GAD gluta 100.0 1.4E-39 3.1E-44 325.6 33.4 314 105-428 15-344 (431)
5 PLN02590 probable tyrosine dec 100.0 1.2E-38 2.6E-43 324.6 31.2 318 103-427 99-445 (539)
6 PLN02263 serine decarboxylase 100.0 4.6E-38 9.9E-43 312.6 30.1 294 114-429 75-381 (470)
7 PLN03032 serine decarboxylase; 100.0 6.5E-37 1.4E-41 300.4 29.8 253 162-429 52-314 (374)
8 PLN02880 tyrosine decarboxylas 100.0 3.3E-36 7.2E-41 306.7 32.3 322 103-434 51-407 (490)
9 PRK02769 histidine decarboxyla 100.0 5.7E-36 1.2E-40 295.9 29.9 242 172-428 62-310 (380)
10 TIGR03799 NOD_PanD_pyr putativ 100.0 2.3E-35 5.1E-40 301.0 35.0 321 104-433 59-426 (522)
11 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.2E-33 4.7E-38 288.6 35.2 317 108-428 56-474 (608)
12 PRK13520 L-tyrosine decarboxyl 100.0 4E-30 8.8E-35 255.7 30.3 299 112-427 2-300 (371)
13 COG1104 NifS Cysteine sulfinat 100.0 6.7E-30 1.5E-34 245.1 27.5 259 145-429 14-283 (386)
14 TIGR03812 tyr_de_CO2_Arch tyro 100.0 7.4E-29 1.6E-33 246.9 31.7 304 114-428 2-306 (373)
15 COG0520 csdA Selenocysteine ly 100.0 3.6E-29 7.7E-34 248.6 26.8 266 145-434 35-327 (405)
16 cd06450 DOPA_deC_like DOPA dec 100.0 3.4E-28 7.4E-33 239.5 21.2 240 151-428 14-266 (345)
17 PLN02651 cysteine desulfurase 100.0 7.8E-27 1.7E-31 231.6 29.5 268 145-434 12-287 (364)
18 COG0436 Aspartate/tyrosine/aro 99.9 2.4E-26 5.2E-31 228.6 24.1 220 100-366 30-258 (393)
19 KOG1549|consensus 99.9 3.4E-26 7.4E-31 220.3 24.1 256 145-421 56-317 (428)
20 PRK09295 bifunctional cysteine 99.9 4E-26 8.6E-31 229.9 25.8 268 145-434 36-328 (406)
21 TIGR02006 IscS cysteine desulf 99.9 9.2E-26 2E-30 226.8 27.2 265 145-431 16-287 (402)
22 TIGR03392 FeS_syn_CsdA cystein 99.9 7E-26 1.5E-30 227.5 26.0 240 172-432 57-318 (398)
23 TIGR01977 am_tr_V_EF2568 cyste 99.9 1.6E-25 3.5E-30 223.1 28.4 266 145-433 13-296 (376)
24 TIGR03235 DNA_S_dndA cysteine 99.9 2E-25 4.4E-30 220.6 28.2 267 145-431 11-284 (353)
25 KOG0628|consensus 99.9 6.4E-26 1.4E-30 216.8 22.9 314 101-424 40-388 (511)
26 TIGR03531 selenium_SpcS O-phos 99.9 2.1E-25 4.5E-30 222.7 26.8 288 105-429 28-344 (444)
27 TIGR03402 FeS_nifS cysteine de 99.9 3.5E-25 7.6E-30 221.0 28.3 263 145-432 12-281 (379)
28 KOG0257|consensus 99.9 8.4E-26 1.8E-30 214.9 21.8 216 103-367 36-267 (420)
29 PRK04366 glycine dehydrogenase 99.9 9.1E-25 2E-29 223.5 30.9 305 106-429 45-368 (481)
30 PRK10874 cysteine sulfinate de 99.9 2.8E-25 6E-30 223.4 25.5 241 171-432 59-321 (401)
31 KOG0629|consensus 99.9 4.8E-26 1E-30 215.4 18.3 316 102-429 70-413 (510)
32 cd06453 SufS_like Cysteine des 99.9 3.7E-25 8.1E-30 220.3 25.8 266 145-432 12-300 (373)
33 TIGR03403 nifS_epsilon cystein 99.9 7.1E-25 1.5E-29 219.0 27.5 237 177-433 44-285 (382)
34 PLN02855 Bifunctional selenocy 99.9 5.6E-25 1.2E-29 222.7 26.7 236 173-433 74-335 (424)
35 TIGR01979 sufS cysteine desulf 99.9 7.3E-25 1.6E-29 220.5 27.3 271 146-434 32-322 (403)
36 PRK00451 glycine dehydrogenase 99.9 1.3E-24 2.8E-29 221.5 29.3 266 70-361 3-285 (447)
37 PRK14012 cysteine desulfurase; 99.9 4.6E-24 1E-28 214.7 27.9 235 175-430 49-288 (404)
38 PRK02948 cysteine desulfurase; 99.9 6.2E-24 1.3E-28 212.2 27.6 258 145-426 13-276 (381)
39 PF00266 Aminotran_5: Aminotra 99.9 6.5E-24 1.4E-28 211.3 26.7 270 145-433 12-301 (371)
40 TIGR01976 am_tr_V_VC1184 cyste 99.9 7.6E-24 1.6E-28 212.7 25.9 267 145-432 30-319 (397)
41 TIGR00461 gcvP glycine dehydro 99.9 2.8E-23 6.1E-28 220.7 30.5 300 113-428 467-784 (939)
42 cd06451 AGAT_like Alanine-glyo 99.9 2.9E-24 6.4E-29 212.5 21.2 238 169-426 26-275 (356)
43 PLN02409 serine--glyoxylate am 99.9 1.1E-23 2.5E-28 211.4 20.9 243 169-432 36-297 (401)
44 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.2E-22 2.5E-27 203.2 25.4 168 175-365 63-239 (387)
45 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 7.9E-23 1.7E-27 202.7 23.8 167 176-365 45-220 (361)
46 PLN02414 glycine dehydrogenase 99.9 2.7E-22 5.8E-27 215.9 28.6 292 112-427 504-823 (993)
47 PRK08361 aspartate aminotransf 99.9 1.2E-22 2.5E-27 203.7 23.0 215 101-365 36-257 (391)
48 PRK05367 glycine dehydrogenase 99.9 8.1E-22 1.8E-26 213.1 30.5 296 113-428 479-792 (954)
49 TIGR03540 DapC_direct LL-diami 99.9 2.1E-22 4.5E-27 201.3 24.0 218 101-366 32-258 (383)
50 TIGR02326 transamin_PhnW 2-ami 99.9 9.3E-23 2E-27 202.4 21.0 195 144-363 10-209 (363)
51 PLN00175 aminotransferase fami 99.9 2E-22 4.3E-27 203.1 23.2 218 100-365 56-279 (413)
52 cd00613 GDC-P Glycine cleavage 99.9 5.3E-22 1.1E-26 199.4 25.7 237 168-426 57-324 (398)
53 PRK13355 bifunctional HTH-doma 99.9 2.1E-22 4.6E-27 208.5 23.1 212 100-359 148-368 (517)
54 PRK06207 aspartate aminotransf 99.9 4.7E-22 1E-26 200.0 24.9 220 101-366 42-272 (405)
55 PRK09276 LL-diaminopimelate am 99.9 3.8E-22 8.2E-27 199.6 23.8 218 101-366 34-260 (385)
56 PRK05942 aspartate aminotransf 99.9 3.9E-22 8.5E-27 200.0 23.4 219 101-366 38-264 (394)
57 TIGR01814 kynureninase kynuren 99.9 9.6E-22 2.1E-26 197.9 25.3 231 175-426 71-328 (406)
58 PLN02368 alanine transaminase 99.9 2.1E-21 4.6E-26 194.3 27.1 191 136-366 100-316 (407)
59 COG1168 MalY Bifunctional PLP- 99.9 2.2E-22 4.7E-27 189.8 18.2 265 112-434 38-316 (388)
60 cd00615 Orn_deC_like Ornithine 99.9 3.1E-22 6.8E-27 192.7 19.9 282 117-426 2-292 (294)
61 PRK05764 aspartate aminotransf 99.9 1.2E-21 2.5E-26 196.6 24.3 220 100-366 33-259 (393)
62 PLN02231 alanine transaminase 99.9 2.5E-21 5.3E-26 199.7 27.1 215 110-366 138-376 (534)
63 PRK08912 hypothetical protein; 99.9 1.1E-21 2.4E-26 196.3 23.9 218 100-365 28-252 (387)
64 PLN00143 tyrosine/nicotianamin 99.9 2.2E-21 4.8E-26 195.4 26.0 217 99-361 33-259 (409)
65 PLN02187 rooty/superroot1 99.9 1.9E-21 4.2E-26 198.1 25.9 217 100-362 68-294 (462)
66 PRK06108 aspartate aminotransf 99.9 1.1E-21 2.5E-26 195.9 23.7 217 101-365 27-252 (382)
67 COG1167 ARO8 Transcriptional r 99.9 2.9E-22 6.3E-27 203.6 19.5 265 38-360 44-314 (459)
68 PRK07366 succinyldiaminopimela 99.9 1.9E-21 4.2E-26 194.7 24.9 220 101-366 33-260 (388)
69 PRK07681 aspartate aminotransf 99.9 1.3E-21 2.9E-26 196.5 23.5 218 101-366 35-260 (399)
70 PRK06348 aspartate aminotransf 99.9 1.6E-21 3.5E-26 195.0 23.7 217 101-365 32-254 (384)
71 PRK05957 aspartate aminotransf 99.9 4.1E-21 8.9E-26 192.3 25.8 219 101-366 30-254 (389)
72 PLN02656 tyrosine transaminase 99.9 3.6E-21 7.9E-26 193.8 25.4 216 99-360 32-257 (409)
73 PRK08068 transaminase; Reviewe 99.9 2.5E-21 5.4E-26 193.9 23.9 219 101-366 35-261 (389)
74 PTZ00433 tyrosine aminotransfe 99.9 3.6E-21 7.8E-26 194.1 24.3 223 98-360 33-265 (412)
75 PRK13479 2-aminoethylphosphona 99.9 3E-21 6.5E-26 191.9 23.3 172 171-361 33-209 (368)
76 PRK06290 aspartate aminotransf 99.9 5.7E-21 1.2E-25 192.1 25.3 220 100-366 46-272 (410)
77 PRK08960 hypothetical protein; 99.9 4.8E-21 1E-25 191.7 24.7 214 101-365 35-254 (387)
78 PRK07337 aminotransferase; Val 99.9 3.3E-21 7.2E-26 193.0 23.5 213 101-365 33-252 (388)
79 PTZ00377 alanine aminotransfer 99.9 5.9E-21 1.3E-25 196.1 25.5 210 114-366 90-324 (481)
80 PLN00145 tyrosine/nicotianamin 99.9 9.2E-21 2E-25 191.8 26.3 216 100-361 54-279 (430)
81 PRK09147 succinyldiaminopimela 99.9 5.4E-21 1.2E-25 191.9 24.5 219 100-365 31-265 (396)
82 TIGR01264 tyr_amTase_E tyrosin 99.9 1.4E-20 3.1E-25 189.2 26.8 213 101-360 34-256 (401)
83 PRK12414 putative aminotransfe 99.9 8.6E-21 1.9E-25 189.6 24.9 218 100-365 31-255 (384)
84 PRK07777 aminotransferase; Val 99.9 7.8E-21 1.7E-25 190.2 24.2 217 100-364 26-251 (387)
85 PRK07324 transaminase; Validat 99.9 2.3E-21 5E-26 192.9 20.1 209 101-366 29-243 (373)
86 PRK08636 aspartate aminotransf 99.9 7.6E-21 1.7E-25 191.2 24.0 219 101-366 36-269 (403)
87 PRK09082 methionine aminotrans 99.9 4.3E-21 9.4E-26 192.0 21.6 218 101-365 33-256 (386)
88 TIGR03537 DapC succinyldiamino 99.9 8.1E-21 1.8E-25 187.5 23.2 216 103-365 5-226 (350)
89 PRK07682 hypothetical protein; 99.9 9.8E-21 2.1E-25 188.9 23.3 218 101-365 23-246 (378)
90 PRK08363 alanine aminotransfer 99.9 9.9E-21 2.1E-25 190.2 23.1 212 100-358 32-251 (398)
91 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 4.8E-21 1E-25 189.2 20.5 171 172-361 28-203 (355)
92 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.2E-20 4.7E-25 185.8 25.3 168 176-366 52-228 (370)
93 PRK07309 aromatic amino acid a 99.9 1.4E-20 3E-25 188.6 23.8 219 100-366 32-258 (391)
94 COG0075 Serine-pyruvate aminot 99.9 1.2E-20 2.7E-25 182.7 21.7 243 167-428 30-283 (383)
95 PRK07550 hypothetical protein; 99.9 2.8E-20 6.1E-25 186.2 25.1 215 100-360 31-252 (386)
96 PRK06107 aspartate aminotransf 99.9 1.6E-20 3.5E-25 188.8 23.4 216 101-365 36-261 (402)
97 PRK07683 aminotransferase A; V 99.9 2.3E-20 4.9E-25 186.8 23.9 218 101-366 31-254 (387)
98 PRK09148 aminotransferase; Val 99.9 2.4E-20 5.2E-25 187.7 24.0 218 101-365 33-258 (405)
99 PRK06855 aminotransferase; Val 99.9 2.6E-20 5.7E-25 188.8 23.9 210 103-359 37-258 (433)
100 PRK15481 transcriptional regul 99.9 9.2E-21 2E-25 192.3 20.3 255 35-365 42-301 (431)
101 KOG0259|consensus 99.9 2.4E-20 5.2E-25 174.9 20.9 204 113-362 79-289 (447)
102 TIGR01265 tyr_nico_aTase tyros 99.9 1.2E-19 2.7E-24 182.5 27.4 216 100-361 33-258 (403)
103 cd06454 KBL_like KBL_like; thi 99.9 3E-20 6.6E-25 183.1 22.5 258 138-426 7-273 (349)
104 TIGR03538 DapC_gpp succinyldia 99.9 3.2E-20 6.9E-25 186.2 22.7 222 100-365 30-264 (393)
105 PRK12566 glycine dehydrogenase 99.9 1E-19 2.2E-24 192.5 27.2 300 111-427 478-792 (954)
106 PRK09265 aminotransferase AlaT 99.9 4.6E-20 9.9E-25 185.7 23.6 211 101-359 36-255 (404)
107 PRK06225 aspartate aminotransf 99.9 2.8E-20 6.1E-25 185.7 21.8 164 184-366 75-246 (380)
108 PRK13238 tnaA tryptophanase/L- 99.9 3E-20 6.6E-25 188.4 21.8 199 116-366 58-280 (460)
109 PRK06836 aspartate aminotransf 99.9 8.9E-20 1.9E-24 183.0 24.7 214 101-360 36-260 (394)
110 PLN02724 Molybdenum cofactor s 99.9 4.6E-20 9.9E-25 199.5 23.8 262 148-433 51-372 (805)
111 PLN02376 1-aminocyclopropane-1 99.9 2.3E-20 5E-25 191.3 20.4 192 136-365 87-300 (496)
112 PRK08175 aminotransferase; Val 99.9 1.2E-19 2.5E-24 182.2 24.0 218 101-366 32-258 (395)
113 COG4992 ArgD Ornithine/acetylo 99.9 4.9E-20 1.1E-24 177.0 20.1 266 126-428 38-325 (404)
114 PRK07568 aspartate aminotransf 99.9 1.1E-19 2.5E-24 182.4 23.8 215 101-365 33-256 (397)
115 PTZ00094 serine hydroxymethylt 99.8 1.2E-19 2.7E-24 184.7 23.3 227 172-425 77-321 (452)
116 TIGR01437 selA_rel uncharacter 99.8 6.5E-20 1.4E-24 181.5 20.7 248 145-432 26-288 (363)
117 TIGR01822 2am3keto_CoA 2-amino 99.8 2.1E-19 4.5E-24 180.3 24.1 251 145-426 54-312 (393)
118 PRK03317 histidinol-phosphate 99.8 6.5E-20 1.4E-24 182.3 19.5 217 102-366 30-249 (368)
119 PRK07179 hypothetical protein; 99.8 2.2E-19 4.8E-24 180.9 23.3 251 144-426 69-322 (407)
120 PRK14807 histidinol-phosphate 99.8 2.3E-19 5.1E-24 177.2 21.8 163 185-365 69-233 (351)
121 cd00609 AAT_like Aspartate ami 99.8 5.3E-19 1.2E-23 173.7 24.2 235 171-427 36-279 (350)
122 PRK04870 histidinol-phosphate 99.8 1.4E-19 3.1E-24 179.0 20.2 156 194-366 82-238 (356)
123 cd06502 TA_like Low-specificit 99.8 3.3E-20 7.1E-25 182.1 15.2 171 176-366 33-215 (338)
124 PF02347 GDC-P: Glycine cleava 99.8 1.2E-18 2.7E-23 171.2 25.8 327 70-429 2-364 (429)
125 PLN02450 1-aminocyclopropane-1 99.8 7.4E-20 1.6E-24 186.8 17.7 193 136-365 79-293 (468)
126 PRK05839 hypothetical protein; 99.8 6.8E-19 1.5E-23 175.3 23.6 214 99-366 25-253 (374)
127 PRK09257 aromatic amino acid a 99.8 2.1E-19 4.6E-24 180.4 19.4 214 100-358 28-260 (396)
128 TIGR01141 hisC histidinol-phos 99.8 3.2E-19 6.9E-24 175.9 19.7 170 179-366 58-231 (346)
129 PRK05367 glycine dehydrogenase 99.8 2.7E-18 5.9E-23 185.9 28.4 325 69-427 12-371 (954)
130 PRK09105 putative aminotransfe 99.8 6.9E-19 1.5E-23 174.9 22.1 169 178-366 81-254 (370)
131 PLN02607 1-aminocyclopropane-1 99.8 2.3E-19 5E-24 182.0 18.8 223 106-365 53-300 (447)
132 PRK06358 threonine-phosphate d 99.8 8.9E-19 1.9E-23 173.2 22.2 167 183-366 62-235 (354)
133 PRK02610 histidinol-phosphate 99.8 5.2E-19 1.1E-23 176.2 20.2 214 103-366 33-255 (374)
134 PRK01533 histidinol-phosphate 99.8 1.8E-19 4E-24 178.7 16.8 161 189-366 78-243 (366)
135 PLN02414 glycine dehydrogenase 99.8 5.4E-18 1.2E-22 182.8 28.9 261 69-362 37-316 (993)
136 COG1003 GcvP Glycine cleavage 99.8 3.9E-18 8.5E-23 162.8 24.3 300 107-428 40-363 (496)
137 cd01494 AAT_I Aspartate aminot 99.8 2.8E-19 6.2E-24 156.9 15.1 164 178-359 3-170 (170)
138 PRK08056 threonine-phosphate d 99.8 8.1E-19 1.8E-23 173.6 20.0 168 180-365 60-233 (356)
139 PRK03158 histidinol-phosphate 99.8 7.6E-19 1.6E-23 174.1 19.8 170 180-365 69-242 (359)
140 PRK09275 aspartate aminotransf 99.8 1.2E-18 2.5E-23 177.9 20.8 209 103-361 105-328 (527)
141 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.2E-18 2.5E-23 173.7 20.3 163 179-365 37-201 (379)
142 PRK05387 histidinol-phosphate 99.8 1.1E-18 2.5E-23 172.4 19.8 162 183-366 68-231 (353)
143 PRK01688 histidinol-phosphate 99.8 3.3E-19 7.1E-24 176.1 15.8 170 178-366 60-234 (351)
144 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 6.2E-19 1.4E-23 173.5 17.4 292 116-433 2-324 (417)
145 PRK08637 hypothetical protein; 99.8 1.8E-18 3.9E-23 173.2 21.1 188 135-360 36-243 (388)
146 PRK08776 cystathionine gamma-s 99.8 1.5E-18 3.3E-23 173.6 20.5 160 179-366 64-229 (405)
147 PRK00011 glyA serine hydroxyme 99.8 2.8E-18 6E-23 173.4 22.3 225 172-426 68-302 (416)
148 PRK04635 histidinol-phosphate 99.8 5E-19 1.1E-23 175.0 16.5 168 180-366 65-235 (354)
149 cd00378 SHMT Serine-glycine hy 99.8 2.7E-18 5.9E-23 172.7 22.1 201 145-366 32-244 (402)
150 PF00155 Aminotran_1_2: Aminot 99.8 4.4E-19 9.6E-24 175.9 16.1 208 113-366 19-242 (363)
151 PRK08861 cystathionine gamma-s 99.8 7.5E-19 1.6E-23 174.5 17.6 158 180-365 58-221 (388)
152 PLN03026 histidinol-phosphate 99.8 2.9E-18 6.2E-23 171.1 21.4 169 179-365 90-260 (380)
153 PTZ00376 aspartate aminotransf 99.8 8.6E-19 1.9E-23 176.4 17.7 192 136-363 65-272 (404)
154 PRK06939 2-amino-3-ketobutyrat 99.8 4.3E-18 9.4E-23 170.8 22.5 251 145-426 58-316 (397)
155 PRK09440 avtA valine--pyruvate 99.8 3.8E-18 8.2E-23 172.5 21.8 226 100-366 32-269 (416)
156 PRK07590 L,L-diaminopimelate a 99.8 5.5E-18 1.2E-22 170.9 22.4 213 101-364 37-268 (409)
157 PRK03321 putative aminotransfe 99.8 2E-18 4.3E-23 170.6 18.4 172 180-366 62-237 (352)
158 cd00616 AHBA_syn 3-amino-5-hyd 99.8 5.5E-18 1.2E-22 167.3 21.3 231 177-432 20-257 (352)
159 PRK03080 phosphoserine aminotr 99.8 1.4E-18 3E-23 173.2 17.0 167 169-363 42-212 (378)
160 PRK05166 histidinol-phosphate 99.8 4.2E-18 9.1E-23 169.5 20.2 172 180-366 76-253 (371)
161 PRK08045 cystathionine gamma-s 99.8 2.7E-18 5.9E-23 170.9 18.6 208 179-429 56-272 (386)
162 PRK08134 O-acetylhomoserine am 99.8 5.7E-18 1.2E-22 170.6 21.1 153 178-359 67-225 (433)
163 PRK00950 histidinol-phosphate 99.8 5.2E-18 1.1E-22 168.2 20.3 170 178-365 72-243 (361)
164 PRK02731 histidinol-phosphate 99.8 7.3E-18 1.6E-22 167.6 21.3 171 179-365 71-245 (367)
165 PRK07865 N-succinyldiaminopime 99.8 6.2E-18 1.4E-22 167.9 20.7 206 101-366 30-244 (364)
166 PLN02721 threonine aldolase 99.8 1.6E-18 3.4E-23 171.3 16.2 169 179-366 44-227 (353)
167 PRK08133 O-succinylhomoserine 99.8 2.9E-18 6.3E-23 171.2 18.2 158 178-363 64-226 (390)
168 cd00611 PSAT_like Phosphoserin 99.8 1.3E-18 2.7E-23 172.1 15.3 258 145-428 11-280 (355)
169 PRK08064 cystathionine beta-ly 99.8 2.6E-18 5.7E-23 171.5 17.6 160 178-366 57-222 (390)
170 PRK07811 cystathionine gamma-s 99.8 4E-18 8.7E-23 170.1 18.6 159 179-365 65-229 (388)
171 COG0079 HisC Histidinol-phosph 99.8 4.7E-18 1E-22 166.5 18.6 179 178-375 60-242 (356)
172 PRK05958 8-amino-7-oxononanoat 99.8 1.8E-17 3.8E-22 165.7 22.9 251 145-426 55-310 (385)
173 cd00617 Tnase_like Tryptophana 99.8 1.1E-17 2.4E-22 167.6 21.4 162 195-366 70-255 (431)
174 TIGR03801 asp_4_decarbox aspar 99.8 7.3E-18 1.6E-22 171.8 20.2 151 195-361 157-327 (521)
175 TIGR01825 gly_Cac_T_rel pyrido 99.8 1.7E-17 3.8E-22 165.9 22.8 251 144-426 48-304 (385)
176 TIGR02080 O_succ_thio_ly O-suc 99.8 4.6E-18 1E-22 169.1 18.4 160 179-366 55-220 (382)
177 PLN02822 serine palmitoyltrans 99.8 1.6E-17 3.4E-22 170.0 22.6 261 144-430 124-391 (481)
178 TIGR03588 PseC UDP-4-keto-6-de 99.8 7.5E-18 1.6E-22 168.2 19.7 164 179-365 33-204 (380)
179 TIGR01324 cysta_beta_ly_B cyst 99.8 8.2E-18 1.8E-22 166.9 19.7 155 181-364 56-216 (377)
180 TIGR01329 cysta_beta_ly_E cyst 99.8 4.3E-18 9.4E-23 169.3 17.6 159 178-365 50-214 (378)
181 PRK09028 cystathionine beta-ly 99.8 5.1E-18 1.1E-22 168.5 18.0 201 182-426 68-274 (394)
182 PRK07050 cystathionine beta-ly 99.8 3.2E-18 7E-23 170.9 16.7 160 179-366 69-234 (394)
183 KOG2862|consensus 99.8 1.5E-17 3.2E-22 152.4 19.3 261 144-428 24-300 (385)
184 PLN02242 methionine gamma-lyas 99.8 3.5E-18 7.6E-23 171.6 16.9 158 179-366 80-245 (418)
185 PRK08574 cystathionine gamma-s 99.8 5E-18 1.1E-22 169.0 17.8 158 180-366 58-221 (385)
186 PLN02672 methionine S-methyltr 99.8 2.2E-17 4.7E-22 178.6 24.0 165 194-366 755-932 (1082)
187 TIGR00858 bioF 8-amino-7-oxono 99.8 2.6E-17 5.6E-22 162.8 22.8 251 145-426 32-288 (360)
188 TIGR01328 met_gam_lyase methio 99.8 7.9E-18 1.7E-22 168.1 19.1 160 179-366 63-227 (391)
189 PRK14809 histidinol-phosphate 99.8 1.6E-17 3.6E-22 164.4 21.1 156 191-365 81-242 (357)
190 PRK03967 histidinol-phosphate 99.8 2.3E-17 5.1E-22 161.9 21.9 202 103-366 23-225 (337)
191 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3.1E-17 6.8E-22 162.9 22.5 163 180-366 36-202 (376)
192 PRK07908 hypothetical protein; 99.8 4.2E-17 9.2E-22 161.0 23.3 149 194-366 76-225 (349)
193 PRK08153 histidinol-phosphate 99.8 2E-17 4.4E-22 164.4 20.8 168 180-365 72-243 (369)
194 PRK06425 histidinol-phosphate 99.8 1.2E-17 2.6E-22 163.7 18.8 167 178-366 43-214 (332)
195 PRK06767 methionine gamma-lyas 99.8 1.1E-17 2.5E-22 166.9 18.9 211 179-430 65-282 (386)
196 PRK08249 cystathionine gamma-s 99.8 8.5E-18 1.9E-22 168.0 17.7 160 179-366 68-232 (398)
197 cd00614 CGS_like CGS_like: Cys 99.8 7.9E-18 1.7E-22 167.2 17.0 158 180-365 45-208 (369)
198 COG0399 WecE Predicted pyridox 99.8 4.8E-17 1E-21 158.1 21.9 232 170-428 33-270 (374)
199 PRK03244 argD acetylornithine 99.8 2.2E-17 4.9E-22 165.9 19.9 244 144-426 60-322 (398)
200 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.8E-17 3.8E-22 165.2 18.9 160 178-365 57-221 (380)
201 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.3E-16 2.7E-21 156.8 24.5 259 115-425 8-272 (346)
202 KOG0256|consensus 99.8 7.8E-18 1.7E-22 159.5 15.0 196 135-367 113-326 (471)
203 PRK01278 argD acetylornithine 99.8 7.1E-17 1.5E-21 161.7 22.7 252 144-426 48-314 (389)
204 TIGR03539 DapC_actino succinyl 99.8 6.5E-17 1.4E-21 160.1 22.1 205 101-365 24-237 (357)
205 PLN02509 cystathionine beta-ly 99.8 2.3E-17 5.1E-22 166.6 19.0 158 177-363 135-298 (464)
206 PRK07503 methionine gamma-lyas 99.8 1.2E-17 2.6E-22 167.5 16.7 159 179-366 69-233 (403)
207 PRK14808 histidinol-phosphate 99.8 7.7E-17 1.7E-21 158.1 22.0 201 101-366 22-223 (335)
208 PRK07504 O-succinylhomoserine 99.8 1.4E-17 3.1E-22 166.6 17.2 158 179-364 69-231 (398)
209 PRK07671 cystathionine beta-ly 99.8 1.9E-17 4E-22 164.6 17.7 160 178-366 53-218 (377)
210 TIGR01140 L_thr_O3P_dcar L-thr 99.8 1.8E-17 4E-22 162.3 17.1 159 180-366 52-215 (330)
211 PRK00854 rocD ornithine--oxo-a 99.8 1.5E-16 3.1E-21 160.1 23.6 248 144-426 58-327 (401)
212 PRK07392 threonine-phosphate d 99.8 8E-17 1.7E-21 159.7 21.3 157 191-365 73-236 (360)
213 PRK13392 5-aminolevulinate syn 99.8 1E-16 2.2E-21 161.8 22.3 256 141-425 58-318 (410)
214 PF01041 DegT_DnrJ_EryC1: DegT 99.8 1.2E-16 2.7E-21 158.4 22.4 249 147-429 6-263 (363)
215 PRK05968 hypothetical protein; 99.8 3.5E-17 7.5E-22 163.4 18.3 159 178-366 66-230 (389)
216 PRK06234 methionine gamma-lyas 99.8 2.3E-17 5.1E-22 165.3 17.1 155 182-365 71-233 (400)
217 TIGR01821 5aminolev_synth 5-am 99.8 1.5E-16 3.3E-21 160.1 22.9 253 144-426 60-318 (402)
218 PRK04781 histidinol-phosphate 99.8 5.2E-17 1.1E-21 161.1 19.2 172 178-366 62-241 (364)
219 PRK06460 hypothetical protein; 99.7 4.1E-17 8.8E-22 162.2 18.2 159 179-366 49-213 (376)
220 PRK08354 putative aminotransfe 99.7 1.3E-16 2.7E-21 155.0 21.2 148 180-358 45-196 (311)
221 PRK07810 O-succinylhomoserine 99.7 2.7E-17 5.9E-22 164.7 16.9 154 179-360 74-233 (403)
222 TIGR03542 DAPAT_plant LL-diami 99.7 1.6E-16 3.5E-21 159.9 22.6 210 100-360 35-262 (402)
223 PRK08247 cystathionine gamma-s 99.7 4.1E-17 8.8E-22 161.8 18.0 158 179-365 56-219 (366)
224 COG0160 GabT 4-aminobutyrate a 99.7 2.3E-16 4.9E-21 156.1 22.6 252 144-428 73-362 (447)
225 PRK06176 cystathionine gamma-s 99.7 3.5E-17 7.5E-22 162.7 16.9 158 179-365 54-217 (380)
226 PRK02627 acetylornithine amino 99.7 1.6E-16 3.4E-21 159.6 21.5 251 145-426 57-321 (396)
227 TIGR01364 serC_1 phosphoserine 99.7 4.7E-17 1E-21 160.0 17.0 230 169-429 31-270 (349)
228 PLN02397 aspartate transaminas 99.7 6.2E-17 1.4E-21 163.6 18.4 184 136-357 84-282 (423)
229 PRK09064 5-aminolevulinate syn 99.7 3.4E-16 7.5E-21 157.7 23.3 252 145-426 62-319 (407)
230 PRK08248 O-acetylhomoserine am 99.7 6.7E-17 1.5E-21 162.9 18.1 154 180-361 69-227 (431)
231 PLN02271 serine hydroxymethylt 99.7 3.4E-16 7.3E-21 157.5 22.8 235 171-426 190-451 (586)
232 PRK07582 cystathionine gamma-l 99.7 8E-17 1.7E-21 159.6 18.1 195 195-430 67-268 (366)
233 PRK05994 O-acetylhomoserine am 99.7 1.2E-16 2.7E-21 161.1 19.5 153 179-359 67-224 (427)
234 PLN03226 serine hydroxymethylt 99.7 5.8E-16 1.3E-20 157.6 24.0 238 172-431 77-337 (475)
235 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 2.7E-16 5.8E-21 156.6 20.8 159 182-365 38-200 (375)
236 PLN03227 serine palmitoyltrans 99.7 2.9E-16 6.2E-21 157.1 21.0 254 144-425 13-280 (392)
237 PRK05613 O-acetylhomoserine am 99.7 1.7E-16 3.6E-21 159.9 19.3 156 177-360 71-232 (437)
238 TIGR00461 gcvP glycine dehydro 99.7 2.2E-15 4.8E-20 160.9 28.5 325 71-428 2-360 (939)
239 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.9E-16 6.3E-21 158.3 20.8 157 178-362 60-221 (418)
240 cd00610 OAT_like Acetyl ornith 99.7 2.5E-16 5.4E-21 159.0 20.3 254 144-426 53-332 (413)
241 PRK07269 cystathionine gamma-s 99.7 9E-17 2E-21 158.8 16.6 165 171-366 54-220 (364)
242 PLN02483 serine palmitoyltrans 99.7 5.5E-16 1.2E-20 158.9 22.9 199 145-366 117-329 (489)
243 PRK05939 hypothetical protein; 99.7 1.3E-16 2.9E-21 159.3 17.8 150 182-359 54-207 (397)
244 PRK05355 3-phosphoserine/phosp 99.7 1.1E-16 2.3E-21 158.2 16.7 257 145-431 15-283 (360)
245 TIGR00707 argD acetylornithine 99.7 4.9E-16 1.1E-20 155.0 21.7 252 145-425 45-308 (379)
246 PRK13034 serine hydroxymethylt 99.7 8.7E-16 1.9E-20 154.7 23.0 199 145-364 41-249 (416)
247 PRK08114 cystathionine beta-ly 99.7 1.3E-16 2.8E-21 158.1 16.5 160 171-363 62-229 (395)
248 PRK13393 5-aminolevulinate syn 99.7 1.3E-15 2.8E-20 153.5 23.9 253 144-425 60-317 (406)
249 PRK15029 arginine decarboxylas 99.7 1.3E-15 2.9E-20 160.3 24.8 225 116-361 141-402 (755)
250 PRK07812 O-acetylhomoserine am 99.7 3E-16 6.5E-21 158.0 19.0 155 179-361 73-233 (436)
251 PRK05967 cystathionine beta-ly 99.7 1.7E-16 3.7E-21 157.3 16.9 205 181-429 70-283 (395)
252 PRK04073 rocD ornithine--oxo-a 99.7 1.2E-15 2.6E-20 153.2 23.0 250 144-426 57-326 (396)
253 PRK06702 O-acetylhomoserine am 99.7 7.5E-16 1.6E-20 154.4 20.8 150 171-351 61-214 (432)
254 PRK06084 O-acetylhomoserine am 99.7 4.1E-16 8.9E-21 157.0 19.0 154 179-360 62-220 (425)
255 TIGR00474 selA seryl-tRNA(sec) 99.7 2.1E-15 4.6E-20 152.0 23.9 196 145-360 94-302 (454)
256 PRK03715 argD acetylornithine 99.7 1.9E-15 4.1E-20 151.2 22.9 251 144-426 53-317 (395)
257 PRK05664 threonine-phosphate d 99.7 6.2E-16 1.3E-20 151.4 18.7 157 179-366 53-213 (330)
258 TIGR03246 arg_catab_astC succi 99.7 2E-15 4.3E-20 151.5 22.4 249 144-427 52-319 (397)
259 COG0403 GcvP Glycine cleavage 99.7 1.8E-14 3.8E-19 138.2 27.5 326 69-428 10-377 (450)
260 PRK05937 8-amino-7-oxononanoat 99.7 2.3E-15 5E-20 149.7 22.0 198 141-360 16-225 (370)
261 PTZ00125 ornithine aminotransf 99.7 2.6E-15 5.7E-20 150.9 22.4 255 144-426 48-318 (400)
262 PRK07049 methionine gamma-lyas 99.7 1.3E-15 2.9E-20 153.6 20.0 209 179-430 87-315 (427)
263 PRK06959 putative threonine-ph 99.7 1.1E-15 2.3E-20 150.2 18.8 160 178-366 56-219 (339)
264 KOG0634|consensus 99.7 6.2E-16 1.3E-20 147.8 16.3 220 195-434 126-374 (472)
265 TIGR01366 serC_3 phosphoserine 99.7 4.9E-16 1.1E-20 153.7 16.4 195 135-363 5-203 (361)
266 PRK15407 lipopolysaccharide bi 99.7 2.7E-15 5.9E-20 151.7 21.7 171 180-365 68-240 (438)
267 COG1103 Archaea-specific pyrid 99.7 2.7E-15 5.8E-20 135.1 18.2 195 183-402 69-273 (382)
268 PRK07505 hypothetical protein; 99.7 4.1E-15 8.9E-20 149.6 21.2 250 143-418 60-314 (402)
269 PRK09792 4-aminobutyrate trans 99.7 3.8E-15 8.3E-20 150.3 21.0 267 128-426 38-337 (421)
270 PLN02624 ornithine-delta-amino 99.7 8.4E-15 1.8E-19 149.8 23.4 248 144-426 92-364 (474)
271 PRK13578 ornithine decarboxyla 99.7 6.9E-15 1.5E-19 153.5 22.6 230 117-362 111-372 (720)
272 PRK05965 hypothetical protein; 99.7 7E-15 1.5E-19 149.7 21.9 278 127-428 43-364 (459)
273 PRK04311 selenocysteine syntha 99.7 1.5E-14 3.2E-19 146.4 24.1 199 145-364 99-310 (464)
274 PRK07482 hypothetical protein; 99.7 4.9E-15 1.1E-19 150.9 20.8 276 127-426 47-367 (461)
275 TIGR03372 putres_am_tran putre 99.7 9E-15 2E-19 147.6 22.3 249 144-426 92-366 (442)
276 PRK12381 bifunctional succinyl 99.7 6.4E-15 1.4E-19 148.3 21.2 247 144-426 56-322 (406)
277 COG0161 BioA Adenosylmethionin 99.7 2.5E-15 5.5E-20 147.8 17.1 277 128-427 42-362 (449)
278 PRK11522 putrescine--2-oxoglut 99.7 6.8E-15 1.5E-19 149.4 20.8 254 144-426 99-373 (459)
279 TIGR02618 tyr_phenol_ly tyrosi 99.7 4E-15 8.7E-20 147.2 18.0 238 170-431 70-332 (450)
280 PRK13580 serine hydroxymethylt 99.7 1.1E-14 2.5E-19 146.0 21.4 183 171-364 91-303 (493)
281 COG0156 BioF 7-keto-8-aminopel 99.7 1.1E-14 2.3E-19 142.8 20.5 250 144-424 54-311 (388)
282 PLN00144 acetylornithine trans 99.7 1.1E-14 2.4E-19 145.2 20.9 248 144-425 32-305 (382)
283 COG2873 MET17 O-acetylhomoseri 99.6 1.5E-14 3.3E-19 136.1 19.8 225 170-426 61-308 (426)
284 PRK12403 putative aminotransfe 99.6 2E-14 4.4E-19 146.3 22.1 259 144-426 71-367 (460)
285 PRK04612 argD acetylornithine 99.6 2.5E-14 5.3E-19 143.6 22.1 254 144-427 57-327 (408)
286 PRK06541 hypothetical protein; 99.6 3.3E-14 7.2E-19 144.7 23.2 277 128-428 50-367 (460)
287 PRK06943 adenosylmethionine--8 99.6 2E-14 4.4E-19 145.9 21.3 275 128-427 52-369 (453)
288 PRK10534 L-threonine aldolase; 99.6 1.6E-15 3.5E-20 148.7 12.8 167 180-367 39-217 (333)
289 PRK06058 4-aminobutyrate amino 99.6 1.8E-14 3.8E-19 146.5 20.7 268 127-426 53-358 (443)
290 TIGR00709 dat 2,4-diaminobutyr 99.6 2.6E-14 5.6E-19 145.1 21.7 267 128-427 37-345 (442)
291 PRK05964 adenosylmethionine--8 99.6 1E-14 2.3E-19 147.5 18.7 279 128-428 40-348 (423)
292 PLN02760 4-aminobutyrate:pyruv 99.6 3.6E-14 7.8E-19 145.6 22.5 266 143-427 105-408 (504)
293 PLN02955 8-amino-7-oxononanoat 99.6 3E-14 6.4E-19 142.9 21.2 213 137-365 107-336 (476)
294 PRK05093 argD bifunctional N-s 99.6 4.9E-14 1.1E-18 141.8 23.1 249 144-426 57-323 (403)
295 PRK08360 4-aminobutyrate amino 99.6 3E-14 6.5E-19 144.4 21.3 250 144-426 58-343 (443)
296 PRK07481 hypothetical protein; 99.6 3.4E-14 7.3E-19 144.4 21.2 261 144-427 59-361 (449)
297 TIGR01885 Orn_aminotrans ornit 99.6 8.9E-14 1.9E-18 139.9 24.1 251 144-427 54-327 (401)
298 COG2008 GLY1 Threonine aldolas 99.6 7.2E-15 1.5E-19 138.9 14.5 254 145-434 13-279 (342)
299 PRK06062 hypothetical protein; 99.6 5.5E-14 1.2E-18 142.9 21.7 268 127-426 50-357 (451)
300 PRK06916 adenosylmethionine--8 99.6 3.4E-14 7.3E-19 144.7 20.2 277 127-428 53-373 (460)
301 PRK07030 adenosylmethionine--8 99.6 5.1E-14 1.1E-18 143.4 21.5 276 127-427 44-363 (466)
302 PRK13360 omega amino acid--pyr 99.6 6.5E-14 1.4E-18 142.0 21.9 279 128-427 44-363 (442)
303 PRK02936 argD acetylornithine 99.6 3.1E-14 6.8E-19 142.0 19.4 246 144-425 46-305 (377)
304 COG3977 Alanine-alpha-ketoisov 99.6 5.9E-14 1.3E-18 128.2 19.0 222 101-366 33-269 (417)
305 PRK06917 hypothetical protein; 99.6 5.4E-14 1.2E-18 142.7 20.9 275 128-427 29-345 (447)
306 TIGR02407 ectoine_ectB diamino 99.6 7.3E-14 1.6E-18 140.6 21.7 266 128-426 33-334 (412)
307 PRK07678 aminotransferase; Val 99.6 7.3E-14 1.6E-18 142.0 21.7 272 127-425 44-358 (451)
308 COG0112 GlyA Glycine/serine hy 99.6 7.1E-14 1.5E-18 133.0 19.6 227 171-428 68-302 (413)
309 PRK08742 adenosylmethionine--8 99.6 6.6E-14 1.4E-18 142.6 21.0 276 128-427 62-384 (472)
310 PRK07495 4-aminobutyrate amino 99.6 9.5E-14 2.1E-18 140.1 21.8 269 127-427 37-338 (425)
311 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 2E-14 4.4E-19 142.2 16.6 209 171-426 55-271 (386)
312 PRK07483 hypothetical protein; 99.6 9.8E-14 2.1E-18 140.7 21.9 257 144-426 47-344 (443)
313 PF00464 SHMT: Serine hydroxym 99.6 2.8E-14 6E-19 140.2 17.1 228 171-427 62-317 (399)
314 PRK08117 4-aminobutyrate amino 99.6 8.4E-14 1.8E-18 141.3 21.3 250 144-426 60-346 (433)
315 PRK12566 glycine dehydrogenase 99.6 5.6E-13 1.2E-17 141.9 28.1 320 69-428 15-374 (954)
316 PRK06434 cystathionine gamma-l 99.6 1.7E-14 3.6E-19 143.1 15.3 160 170-365 63-229 (384)
317 PRK07480 putative aminotransfe 99.6 9.1E-14 2E-18 141.3 20.5 260 144-427 67-365 (456)
318 TIGR00700 GABAtrnsam 4-aminobu 99.6 6.5E-14 1.4E-18 141.5 19.2 267 128-426 31-336 (420)
319 KOG1402|consensus 99.6 8.9E-14 1.9E-18 128.6 18.1 251 145-428 77-349 (427)
320 PF00202 Aminotran_3: Aminotra 99.6 6.3E-14 1.4E-18 137.4 18.4 258 144-428 33-318 (339)
321 PRK06938 diaminobutyrate--2-ox 99.6 1.2E-13 2.6E-18 140.6 21.0 268 127-427 60-370 (464)
322 PRK05630 adenosylmethionine--8 99.6 7.4E-14 1.6E-18 140.7 19.1 276 127-427 37-348 (422)
323 PRK07986 adenosylmethionine--8 99.6 9E-14 1.9E-18 140.2 19.7 276 127-427 40-351 (428)
324 PRK08593 4-aminobutyrate amino 99.6 1.9E-13 4.1E-18 138.8 22.2 251 144-426 59-346 (445)
325 PRK09221 beta alanine--pyruvat 99.6 2.1E-13 4.6E-18 138.3 22.5 263 144-427 66-366 (445)
326 PRK05769 4-aminobutyrate amino 99.6 5E-13 1.1E-17 135.5 25.2 249 144-426 71-358 (441)
327 PRK09264 diaminobutyrate--2-ox 99.6 2.9E-13 6.3E-18 136.9 23.2 266 128-426 37-338 (425)
328 PRK07036 hypothetical protein; 99.6 2.8E-13 6E-18 138.2 23.1 260 144-427 68-369 (466)
329 KOG0258|consensus 99.6 3.8E-14 8.3E-19 133.7 15.3 224 55-316 11-262 (475)
330 PRK04013 argD acetylornithine/ 99.6 1.1E-13 2.5E-18 136.4 19.5 226 144-415 41-285 (364)
331 PRK15400 lysine decarboxylase 99.6 1.1E-13 2.4E-18 144.4 20.3 226 117-361 132-383 (714)
332 PRK06918 4-aminobutyrate amino 99.6 1.8E-13 3.9E-18 139.5 21.5 252 143-426 70-358 (451)
333 PRK15399 lysine decarboxylase 99.6 6.2E-13 1.3E-17 138.9 25.6 221 117-361 132-383 (713)
334 PRK12389 glutamate-1-semialdeh 99.6 1.9E-13 4.2E-18 138.2 21.4 248 144-426 70-341 (428)
335 PRK06777 4-aminobutyrate amino 99.6 1.4E-13 3.1E-18 138.9 20.3 267 128-426 38-337 (421)
336 PRK06105 aminotransferase; Pro 99.6 2E-13 4.3E-18 139.1 21.2 280 127-427 45-366 (460)
337 TIGR01365 serC_2 phosphoserine 99.6 6.1E-14 1.3E-18 138.2 16.3 260 135-430 5-283 (374)
338 COG0001 HemL Glutamate-1-semia 99.6 2.6E-13 5.7E-18 132.2 19.9 260 128-425 51-341 (432)
339 PRK05639 4-aminobutyrate amino 99.6 3E-13 6.5E-18 137.5 20.8 249 144-426 70-360 (457)
340 TIGR00713 hemL glutamate-1-sem 99.6 9.8E-14 2.1E-18 140.6 17.2 263 128-424 46-334 (423)
341 PRK06082 4-aminobutyrate amino 99.6 3.3E-13 7.2E-18 137.3 20.9 250 144-427 88-369 (459)
342 KOG1401|consensus 99.6 4.2E-13 9E-18 128.0 19.5 258 144-425 73-347 (433)
343 PRK04260 acetylornithine amino 99.5 5.6E-13 1.2E-17 132.9 21.3 244 145-425 46-303 (375)
344 PRK06931 diaminobutyrate--2-ox 99.5 3.9E-13 8.5E-18 136.8 20.4 267 127-426 55-363 (459)
345 PRK13237 tyrosine phenol-lyase 99.5 3.8E-13 8.3E-18 133.6 19.7 189 170-376 77-290 (460)
346 KOG0053|consensus 99.5 1.4E-13 3E-18 133.2 15.9 158 181-366 83-246 (409)
347 PRK06173 adenosylmethionine--8 99.5 3.6E-13 7.9E-18 135.9 19.6 274 128-426 42-352 (429)
348 PLN02482 glutamate-1-semialdeh 99.5 4.1E-13 9E-18 136.6 19.1 260 127-426 96-387 (474)
349 COG0626 MetC Cystathionine bet 99.5 2.6E-13 5.5E-18 133.0 16.6 202 183-426 71-279 (396)
350 PRK08088 4-aminobutyrate amino 99.5 8E-13 1.7E-17 133.8 19.8 251 144-426 58-338 (425)
351 PF01212 Beta_elim_lyase: Beta 99.5 5.9E-14 1.3E-18 133.8 9.9 193 144-364 7-212 (290)
352 COG3844 Kynureninase [Amino ac 99.5 1.4E-12 3.1E-17 120.7 18.4 231 170-423 71-319 (407)
353 KOG1368|consensus 99.5 1.1E-13 2.4E-18 126.3 10.2 208 141-376 31-254 (384)
354 PLN02452 phosphoserine transam 99.5 7.5E-13 1.6E-17 130.4 16.8 231 167-428 44-284 (365)
355 PRK08297 L-lysine aminotransfe 99.5 1.3E-12 2.8E-17 132.5 17.9 258 144-426 62-365 (443)
356 PRK00615 glutamate-1-semialdeh 99.5 1.7E-12 3.7E-17 131.0 18.4 265 127-425 50-341 (433)
357 TIGR00508 bioA adenosylmethion 99.5 5.2E-12 1.1E-16 127.7 21.1 260 143-427 61-354 (427)
358 PRK00062 glutamate-1-semialdeh 99.5 2E-12 4.3E-17 131.0 17.8 244 144-425 67-337 (426)
359 PRK06149 hypothetical protein; 99.5 4.5E-12 9.7E-17 140.1 21.5 251 144-427 600-886 (972)
360 PRK06148 hypothetical protein; 99.4 3.7E-12 8.1E-17 140.9 20.2 250 144-427 639-926 (1013)
361 KOG1404|consensus 99.4 1.7E-12 3.6E-17 123.0 14.2 261 135-428 58-354 (442)
362 TIGR00699 GABAtrns_euk 4-amino 99.4 1.5E-11 3.2E-16 124.6 22.1 271 128-426 56-388 (464)
363 PRK07046 aminotransferase; Val 99.4 9.3E-12 2E-16 126.5 19.9 264 128-426 73-364 (453)
364 COG1982 LdcC Arginine/lysine/o 99.4 6.9E-12 1.5E-16 126.3 18.5 170 175-361 70-248 (557)
365 PRK12462 phosphoserine aminotr 99.4 1.6E-11 3.4E-16 120.0 19.8 232 168-430 42-285 (364)
366 PLN02974 adenosylmethionine-8- 99.4 1.7E-11 3.8E-16 131.2 20.7 257 143-423 382-732 (817)
367 TIGR03251 LAT_fam L-lysine 6-t 99.4 1.3E-11 2.9E-16 125.0 18.8 258 144-426 55-358 (431)
368 KOG2040|consensus 99.4 3.8E-11 8.3E-16 119.8 18.0 258 156-428 562-835 (1001)
369 KOG1360|consensus 99.3 5.3E-11 1.2E-15 112.9 17.6 254 143-425 185-445 (570)
370 KOG1359|consensus 99.3 2.2E-11 4.7E-16 111.3 14.2 246 145-424 83-333 (417)
371 PRK06209 glutamate-1-semialdeh 99.3 1.4E-10 3E-15 117.5 17.8 265 128-425 46-328 (431)
372 COG1921 SelA Selenocysteine sy 99.2 1.3E-10 2.8E-15 112.3 14.2 189 189-405 79-271 (395)
373 KOG0633|consensus 99.2 2.3E-11 4.9E-16 109.4 7.7 211 194-432 87-305 (375)
374 TIGR02617 tnaA_trp_ase tryptop 99.2 5.4E-10 1.2E-14 110.1 16.2 241 170-424 73-342 (467)
375 PF06838 Met_gamma_lyase: Meth 99.2 2.7E-10 5.9E-15 108.0 12.1 148 200-366 79-244 (403)
376 PF05889 SLA_LP_auto_ag: Solub 99.1 6.1E-10 1.3E-14 107.7 13.5 231 174-428 55-293 (389)
377 COG1448 TyrB Aspartate/tyrosin 99.1 1.3E-09 2.8E-14 103.9 15.4 219 196-425 97-331 (396)
378 PF03841 SelA: L-seryl-tRNA se 99.0 2.2E-10 4.8E-15 109.8 4.3 170 179-366 51-232 (367)
379 KOG1357|consensus 99.0 1E-08 2.2E-13 99.2 14.4 250 149-429 157-424 (519)
380 KOG2467|consensus 99.0 1.2E-07 2.6E-12 89.6 20.0 270 112-427 51-338 (477)
381 PF12897 Aminotran_MocR: Alani 98.9 4.7E-08 1E-12 93.6 17.3 224 179-421 73-318 (425)
382 COG4100 Cystathionine beta-lya 98.8 3E-08 6.6E-13 91.3 11.0 148 201-366 91-255 (416)
383 KOG2040|consensus 98.8 4.2E-07 9E-12 91.6 18.4 251 70-353 55-315 (1001)
384 KOG1358|consensus 98.7 3.3E-07 7.1E-12 87.5 15.2 203 141-366 106-322 (467)
385 COG3033 TnaA Tryptophanase [Am 98.7 9.1E-07 2E-11 83.7 16.1 165 195-363 96-285 (471)
386 KOG1403|consensus 98.6 2.6E-07 5.6E-12 85.2 11.1 252 144-428 62-353 (452)
387 KOG3846|consensus 98.2 1.1E-05 2.3E-10 75.0 10.4 182 179-378 115-309 (465)
388 COG1932 SerC Phosphoserine ami 98.1 0.00012 2.5E-09 70.2 16.1 170 168-364 43-218 (365)
389 KOG1411|consensus 98.0 1.3E-05 2.9E-10 75.5 6.5 213 200-425 127-358 (427)
390 KOG3843|consensus 97.9 2.9E-05 6.2E-10 70.7 7.6 229 175-426 57-293 (432)
391 PLN02994 1-aminocyclopropane-1 97.9 3.3E-05 7.1E-10 66.5 7.4 66 139-237 88-153 (153)
392 KOG1412|consensus 97.7 0.001 2.2E-08 62.3 14.3 115 196-316 102-225 (410)
393 PF04864 Alliinase_C: Allinase 97.7 7.4E-05 1.6E-09 71.1 6.5 150 193-367 66-217 (363)
394 KOG1405|consensus 97.4 0.0011 2.3E-08 63.1 9.8 141 262-427 255-408 (484)
395 KOG0630|consensus 96.5 0.021 4.6E-07 56.8 10.4 187 225-428 231-432 (838)
396 KOG2790|consensus 96.3 0.12 2.5E-06 48.3 13.3 172 170-364 47-223 (370)
397 PLN02672 methionine S-methyltr 89.7 22 0.00047 40.4 17.9 192 65-310 361-565 (1082)
398 TIGR03573 WbuX N-acetyl sugar 87.3 12 0.00026 36.8 12.8 103 194-313 61-171 (343)
399 KOG1465|consensus 80.4 55 0.0012 31.2 23.6 103 194-310 163-272 (353)
400 COG2102 Predicted ATPases of P 77.4 17 0.00038 33.0 8.6 135 195-349 3-149 (223)
401 cd06448 L-Ser-dehyd Serine deh 76.1 54 0.0012 31.8 12.6 98 195-301 53-151 (316)
402 PLN02556 cysteine synthase/L-3 73.1 31 0.00067 34.3 10.2 86 195-287 113-198 (368)
403 COG2185 Sbm Methylmalonyl-CoA 71.8 22 0.00047 30.1 7.3 86 225-317 12-104 (143)
404 COG2515 Acd 1-aminocyclopropan 71.6 64 0.0014 30.9 11.1 117 195-315 65-193 (323)
405 COG0031 CysK Cysteine synthase 69.2 21 0.00046 34.2 7.6 88 192-286 61-153 (300)
406 PF13407 Peripla_BP_4: Peripla 68.9 33 0.00071 31.5 9.0 65 238-307 20-85 (257)
407 cd01018 ZntC Metal binding pro 68.6 54 0.0012 30.8 10.4 72 225-307 170-245 (266)
408 PLN00011 cysteine synthase 67.9 63 0.0014 31.4 11.0 53 195-254 71-123 (323)
409 COG0296 GlgB 1,4-alpha-glucan 67.4 4.2 9.2E-05 42.9 2.8 39 277-315 202-240 (628)
410 COG1737 RpiR Transcriptional r 67.0 1.2E+02 0.0026 28.8 16.9 56 244-307 154-209 (281)
411 PLN02565 cysteine synthase 65.7 66 0.0014 31.3 10.6 83 195-284 69-151 (322)
412 PLN03013 cysteine synthase 65.3 25 0.00054 35.7 7.6 84 195-285 177-260 (429)
413 cd01020 TroA_b Metal binding p 64.8 67 0.0015 30.1 10.2 74 226-306 154-236 (264)
414 PF05368 NmrA: NmrA-like famil 64.4 74 0.0016 28.8 10.3 73 229-307 27-99 (233)
415 TIGR00289 conserved hypothetic 62.5 59 0.0013 29.8 8.9 102 196-306 4-115 (222)
416 TIGR00290 MJ0570_dom MJ0570-re 62.1 67 0.0014 29.5 9.2 96 196-306 4-115 (223)
417 cd01561 CBS_like CBS_like: Thi 58.7 1.4E+02 0.003 28.4 11.3 101 195-302 55-158 (291)
418 COG1105 FruK Fructose-1-phosph 58.6 47 0.001 32.1 7.8 38 277-314 133-171 (310)
419 COG3453 Uncharacterized protei 57.1 40 0.00088 27.5 6.0 72 232-303 44-127 (130)
420 TIGR01139 cysK cysteine syntha 56.6 1.3E+02 0.0028 28.7 10.7 87 195-288 59-146 (298)
421 PRK12595 bifunctional 3-deoxy- 56.4 87 0.0019 31.0 9.6 77 234-314 213-299 (360)
422 PRK08329 threonine synthase; V 56.3 91 0.002 30.6 9.8 98 195-302 106-203 (347)
423 TIGR03581 EF_0839 conserved hy 55.8 1.4E+02 0.0031 27.2 9.7 61 246-314 149-214 (236)
424 TIGR01138 cysM cysteine syntha 54.0 1.1E+02 0.0024 29.1 9.8 54 195-255 61-114 (290)
425 cd00640 Trp-synth-beta_II Tryp 53.5 71 0.0015 29.4 8.2 98 195-301 52-149 (244)
426 PF14654 Epiglycanin_C: Mucin, 53.5 20 0.00044 27.8 3.5 23 21-43 13-35 (106)
427 PRK07476 eutB threonine dehydr 53.5 2E+02 0.0042 27.9 11.6 96 196-301 70-165 (322)
428 PF01297 TroA: Periplasmic sol 53.3 1.4E+02 0.003 27.7 10.2 122 172-307 100-227 (256)
429 PRK02991 D-serine dehydratase; 53.2 2.2E+02 0.0048 29.1 12.2 52 195-253 159-210 (441)
430 PRK11761 cysM cysteine synthas 52.7 1.5E+02 0.0032 28.4 10.4 53 195-254 65-117 (296)
431 cd01563 Thr-synth_1 Threonine 52.6 1.6E+02 0.0034 28.5 10.8 96 195-301 72-167 (324)
432 COG2870 RfaE ADP-heptose synth 52.4 43 0.00092 33.4 6.5 81 228-310 94-179 (467)
433 PF01902 ATP_bind_4: ATP-bindi 52.1 67 0.0014 29.4 7.5 99 196-306 4-115 (218)
434 PF02603 Hpr_kinase_N: HPr Ser 52.0 22 0.00048 29.3 4.0 40 264-309 73-112 (127)
435 PRK05638 threonine synthase; V 51.7 2E+02 0.0044 29.3 11.8 52 195-253 114-165 (442)
436 cd01455 vWA_F11C1-5a_type Von 50.8 31 0.00068 30.8 4.9 39 272-310 112-150 (191)
437 PF10087 DUF2325: Uncharacteri 50.3 1.2E+02 0.0025 23.5 8.1 70 234-308 11-81 (97)
438 cd01422 MGS Methylglyoxal synt 49.8 1.4E+02 0.003 24.1 8.8 60 245-307 44-106 (115)
439 cd01019 ZnuA Zinc binding prot 49.4 2.4E+02 0.0052 26.8 12.1 72 225-306 179-255 (286)
440 COG1184 GCD2 Translation initi 49.2 2.5E+02 0.0054 27.0 14.6 117 176-309 105-228 (301)
441 TIGR03679 arCOG00187 arCOG0018 48.7 1.3E+02 0.0029 27.3 9.0 96 197-306 2-116 (218)
442 PF04748 Polysacc_deac_2: Dive 48.2 2.1E+02 0.0046 25.9 10.2 93 203-306 105-206 (213)
443 TIGR01136 cysKM cysteine synth 47.3 2.2E+02 0.0049 27.1 10.8 53 195-254 60-112 (299)
444 PF02662 FlpD: Methyl-viologen 46.8 99 0.0021 25.4 7.1 55 247-303 29-91 (124)
445 PRK08638 threonine dehydratase 46.5 1E+02 0.0022 30.1 8.4 52 195-253 77-128 (333)
446 cd02070 corrinoid_protein_B12- 46.3 2.2E+02 0.0047 25.4 11.1 72 225-302 82-161 (201)
447 PRK10886 DnaA initiator-associ 45.3 1.9E+02 0.004 25.9 9.2 43 263-309 101-143 (196)
448 cd01017 AdcA Metal binding pro 45.2 2.7E+02 0.0059 26.3 13.1 72 225-306 171-247 (282)
449 smart00642 Aamy Alpha-amylase 44.2 20 0.00043 31.2 2.7 28 284-311 65-92 (166)
450 PRK02261 methylaspartate mutas 44.0 1.8E+02 0.0039 24.3 8.4 58 238-301 23-81 (137)
451 PF01008 IF-2B: Initiation fac 43.6 2.9E+02 0.0062 26.0 17.3 103 194-310 108-218 (282)
452 cd06305 PBP1_methylthioribose_ 43.5 1.3E+02 0.0027 27.7 8.3 64 238-306 21-84 (273)
453 cd06282 PBP1_GntR_like_2 Ligan 43.4 1.4E+02 0.0031 27.0 8.7 8 245-252 28-35 (266)
454 PF00532 Peripla_BP_1: Peripla 43.2 1.3E+02 0.0028 28.4 8.3 72 228-307 6-84 (279)
455 TIGR00288 conserved hypothetic 43.1 1.4E+02 0.0031 25.8 7.6 76 228-309 61-136 (160)
456 COG0552 FtsY Signal recognitio 41.0 1.3E+02 0.0027 29.4 7.7 106 203-315 153-273 (340)
457 COG0352 ThiE Thiamine monophos 40.8 46 0.001 30.2 4.6 49 262-310 24-73 (211)
458 TIGR01137 cysta_beta cystathio 39.4 3.2E+02 0.0069 27.7 11.1 54 195-255 64-117 (454)
459 cd01994 Alpha_ANH_like_IV This 39.4 2E+02 0.0044 25.6 8.5 98 196-306 3-118 (194)
460 COG1954 GlpP Glycerol-3-phosph 39.4 49 0.0011 28.8 4.2 47 261-312 12-60 (181)
461 TIGR02035 D_Ser_am_lyase D-ser 38.9 4.4E+02 0.0095 26.8 12.6 53 195-254 154-206 (431)
462 cd01562 Thr-dehyd Threonine de 38.8 2.7E+02 0.0058 26.5 9.9 53 195-254 67-119 (304)
463 PRK09545 znuA high-affinity zi 38.5 3.7E+02 0.008 25.9 11.8 71 227-307 205-280 (311)
464 cd01137 PsaA Metal binding pro 38.3 3.5E+02 0.0077 25.6 11.7 69 227-305 179-252 (287)
465 cd06319 PBP1_ABC_sugar_binding 38.3 1.6E+02 0.0034 27.1 8.1 65 238-307 21-85 (277)
466 PTZ00081 enolase; Provisional 37.9 1.4E+02 0.003 30.5 7.9 100 201-311 282-385 (439)
467 PLN02970 serine racemase 37.7 1.2E+02 0.0025 29.6 7.2 53 195-254 77-129 (328)
468 KOG3974|consensus 37.3 1.4E+02 0.0029 28.1 6.9 67 242-310 73-140 (306)
469 cd06318 PBP1_ABC_sugar_binding 37.3 2E+02 0.0043 26.5 8.6 65 238-307 21-85 (282)
470 TIGR00511 ribulose_e2b2 ribose 37.3 3.8E+02 0.0083 25.7 14.1 115 179-310 104-225 (301)
471 PRK08813 threonine dehydratase 37.0 2.5E+02 0.0054 27.7 9.4 52 195-253 83-134 (349)
472 PRK00509 argininosuccinate syn 37.0 1.4E+02 0.003 30.1 7.6 104 195-312 5-119 (399)
473 TIGR01501 MthylAspMutase methy 35.8 2E+02 0.0043 24.0 7.3 60 238-303 21-81 (134)
474 TIGR01060 eno phosphopyruvate 35.8 93 0.002 31.6 6.4 80 228-309 281-364 (425)
475 PF03652 UPF0081: Uncharacteri 35.7 1.1E+02 0.0023 25.6 5.7 57 257-313 35-99 (135)
476 PRK08535 translation initiatio 35.4 4.2E+02 0.009 25.6 14.2 115 179-310 109-230 (310)
477 PRK05678 succinyl-CoA syntheta 35.2 76 0.0016 30.4 5.3 78 229-313 48-127 (291)
478 cd01575 PBP1_GntR Ligand-bindi 35.1 2.8E+02 0.0062 25.0 9.3 12 242-253 25-36 (268)
479 PRK14101 bifunctional glucokin 34.7 6E+02 0.013 27.2 16.0 35 268-306 512-546 (638)
480 PF00128 Alpha-amylase: Alpha 34.5 23 0.00051 33.4 1.8 31 282-312 45-75 (316)
481 TIGR00789 flhB_rel flhB C-term 34.2 37 0.00081 25.7 2.4 28 289-316 27-54 (82)
482 TIGR02104 pulA_typeI pullulana 34.0 26 0.00056 37.4 2.1 36 279-314 219-254 (605)
483 TIGR02634 xylF D-xylose ABC tr 33.9 1.6E+02 0.0034 27.9 7.5 63 239-306 21-83 (302)
484 cd06292 PBP1_LacI_like_10 Liga 33.8 2.8E+02 0.0061 25.3 9.1 43 238-280 21-63 (273)
485 TIGR00640 acid_CoA_mut_C methy 33.8 2.4E+02 0.0051 23.4 7.5 72 225-302 2-81 (132)
486 PF13380 CoA_binding_2: CoA bi 33.5 82 0.0018 25.4 4.6 44 262-312 69-112 (116)
487 TIGR01361 DAHP_synth_Bsub phos 33.2 4.1E+02 0.009 24.9 13.9 77 234-314 120-206 (260)
488 PRK00077 eno enolase; Provisio 33.0 1.7E+02 0.0038 29.6 7.8 81 228-310 280-364 (425)
489 KOG2741|consensus 32.8 1.9E+02 0.0041 28.4 7.4 74 233-313 59-133 (351)
490 cd06309 PBP1_YtfQ_like Peripla 32.2 1.7E+02 0.0036 26.9 7.2 65 238-307 21-85 (273)
491 cd06322 PBP1_ABC_sugar_binding 32.0 2.3E+02 0.005 25.8 8.1 63 239-306 22-84 (267)
492 TIGR02402 trehalose_TreZ malto 32.0 35 0.00075 35.9 2.6 35 280-314 151-185 (542)
493 PRK07048 serine/threonine dehy 31.9 2.4E+02 0.0051 27.2 8.3 53 195-254 74-126 (321)
494 PRK10494 hypothetical protein; 31.8 97 0.0021 29.1 5.4 72 177-255 138-210 (259)
495 COG1504 Uncharacterized conser 31.8 1.2E+02 0.0026 24.4 4.9 49 258-308 47-95 (121)
496 PRK06450 threonine synthase; V 31.8 4E+02 0.0087 26.0 9.9 77 195-285 99-175 (338)
497 cd01538 PBP1_ABC_xylose_bindin 31.6 2.7E+02 0.0058 26.0 8.5 65 238-307 21-85 (288)
498 cd06320 PBP1_allose_binding Pe 31.2 2.4E+02 0.0051 25.9 8.0 65 238-307 21-87 (275)
499 PRK08246 threonine dehydratase 31.2 3.4E+02 0.0074 26.0 9.3 104 165-284 46-149 (310)
500 TIGR01536 asn_synth_AEB aspara 30.8 3E+02 0.0066 28.1 9.3 118 171-309 233-363 (467)
No 1
>KOG1383|consensus
Probab=100.00 E-value=1.3e-57 Score=434.35 Aligned_cols=370 Identities=41% Similarity=0.707 Sum_probs=348.5
Q ss_pred chhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCC
Q psy10210 54 TDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWK 133 (435)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~ 133 (435)
..++.+|+.+++|+.++++|.++..+++++++..+++...+........+...+|+++++-+++++.+.++.+.+.+ |.
T Consensus 3 ~~~l~~r~~~~~f~~l~~~p~v~~~i~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~-~~ 81 (491)
T KOG1383|consen 3 EEGLKKRLSGKVFKLLKKLPFVRVLIEKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGN-PR 81 (491)
T ss_pred chhHHHHhHHHHHHHHhhChHHHHHHHHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCC-cc
Confidence 36788999999999999999999999999999999999888877777777889999999999999999999987766 88
Q ss_pred CCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH
Q psy10210 134 HGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY 213 (435)
Q Consensus 134 ~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~ 213 (435)
.+..++.+|.+.++..+.+.+.++++ |++++|.+|..++++.++++|+++||+.+++.++..|+|||||+.++++.+
T Consensus 82 ~~~vS~~v~~~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~ 158 (491)
T KOG1383|consen 82 LGLASGVVYWGEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSY 158 (491)
T ss_pred cCeeeEEEecCCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHH
Confidence 89999999999999999999999997 899999999999999999999999999998889999999999999999999
Q ss_pred HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHH
Q psy10210 214 RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIG 292 (435)
Q Consensus 214 ~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~ 292 (435)
++.....+|+.+|+++++...|.++.+++++++++++.||++ .++++|+..+.+.+++||++++.+.|++|+|.+|+++
T Consensus 159 ~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve 238 (491)
T KOG1383|consen 159 RNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVE 238 (491)
T ss_pred HHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHH
Confidence 988877799999999999999999999999999999999999 7899999999999999999999999999999999999
Q ss_pred HHHHHHHH-cCCcEEEeccccchhhhcccccCCC-CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210 293 AIAKLGEK-YGIPVHVDCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370 (435)
Q Consensus 293 ~i~~la~~-~~~~livD~~~~~~~~~~~~~~g~~-~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~ 370 (435)
+|.+++.+ +++++|+|+|.|+|+.| +++. ..+|||+.+|+.++++++||||++|+|+|++++++++++..++.+
T Consensus 239 ~l~~l~~e~w~ipiHvDa~~GgFi~p----~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~ 314 (491)
T KOG1383|consen 239 KLADLLLEIWDIPIHVDACLGGFINP----AGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFF 314 (491)
T ss_pred HHHHHHHHHhCCceeecccCcccccc----ccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEE
Confidence 99999999 99999999999999997 2322 338999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
..+|.||.|+++|++|||+++.++++|++|..+|.+||.+..+++.+.++.+.++++++..
T Consensus 315 ~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~ 375 (491)
T KOG1383|consen 315 HTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKG 375 (491)
T ss_pred eccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999998888877766543
No 2
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-44 Score=356.98 Aligned_cols=323 Identities=31% Similarity=0.486 Sum_probs=273.3
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
......|+.+.+.++++.++......+...+ ++ ...+....+.+.......+.+..+...|..+++.+|+..++|.++
T Consensus 28 ~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~-~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~ 106 (460)
T COG0076 28 SDSRMAPEKGEPLEEVLDELAELLIKDELYL-DGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERV 106 (460)
T ss_pred hhhccCCccCCchhhHHHHHHHHhhcccccc-cCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHH
Confidence 3345778999999999999998855443332 32 222222234444455555555555566899999999999999999
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc---C---CCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK---G---ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~---g---~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
+.|+++++|++....+.+|+|||||+.+++.+.++...... + ...|+|+++..+|+++.|+++++|++++.+|+
T Consensus 107 v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~ 186 (460)
T COG0076 107 VNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT 186 (460)
T ss_pred HHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe
Confidence 99999999998777899999999999999999998875311 1 23689999999999999999999999999999
Q ss_pred CC-CccccHHHHHHHhhcCceE--EEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210 255 TS-SYTVDLAALQSAITGNTVM--LVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF 331 (435)
Q Consensus 255 ~~-~~~~d~~~l~~~i~~~~~~--v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~ 331 (435)
++ ++++|+++++++|++++.. |+.+.+++++|.+||+++|+++|++|++|+|||+|+|||+++|.+..+ .|++
T Consensus 187 ~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~----~~~f 262 (460)
T COG0076 187 VPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDG----RWDF 262 (460)
T ss_pred ccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccc----hhhc
Confidence 86 7999999999999999888 999999999999999999999999999999999999999999998776 4889
Q ss_pred CCCCccEEEecCCCCCCccCCcEEEEEeCC-ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210 332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDL-KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW 410 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~-~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~ 410 (435)
..++|||+++|+||||++|.|+|+++++|+ .+.+...+..+.+.++...+.++.+||++..++++|+.++.+|.+||.+
T Consensus 263 ~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~ 342 (460)
T COG0076 263 GLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRK 342 (460)
T ss_pred CCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHH
Confidence 999999999999999999999999999999 4666555555556665667788999999988899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCc
Q psy10210 411 ICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 411 ~~~~~~~~~~~~~~~l~~l 429 (435)
.+++..+.++++.+++..+
T Consensus 343 l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 343 LLDRTLELARYLAEELEKL 361 (460)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9998888888887776654
No 3
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=8.6e-41 Score=329.69 Aligned_cols=317 Identities=29% Similarity=0.384 Sum_probs=256.9
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+...+|+.+.+.+++++++.+.+......|.++.+.+..+. .+.....+.+.+....+.|.++++.+|...++|.++.+
T Consensus 8 ~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~-~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~ 86 (373)
T PF00282_consen 8 LDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPG-GPSPASILADLLASALNQNGFTWEASPAATEIEREVIR 86 (373)
T ss_dssp CHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---CHHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHH
T ss_pred CccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccC-CccHHHHHHHHHHhhhcccccccccccccccchHHHHH
Confidence 45577898899999999999999988888987877766654 46677788888888778889999999999999999999
Q ss_pred HHHHHhCCCC------CCceEEcCChHHHHHHHHHHHHHHhhh---hcC---CCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210 183 MCARMFNGGP------ETCGCMTSGGTESIMMACKAYRDYARE---EKG---ISLPEIVLPTTAHPAFDKAANYFGMKVK 250 (435)
Q Consensus 183 ~la~l~g~~~------~~~~~~t~ggteai~~a~~a~~~~~~~---~~g---~~~~~viv~~~~~~~~~~~~~~~g~~v~ 250 (435)
|+++++|.+. ...+++|+|||+|+..++.++|+.... .+| ..++.|++++.+|+++.+++..+|+.++
T Consensus 87 ~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~ 166 (373)
T PF00282_consen 87 WLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVR 166 (373)
T ss_dssp HHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEE
T ss_pred HHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEEE
Confidence 9999999982 247999999999999999999876543 245 4578899999999999999999999999
Q ss_pred EEecCCCccccHHHHHHHhhc---C---ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh--hccccc
Q psy10210 251 HIRLTSSYTVDLAALQSAITG---N---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA--PFMSAA 322 (435)
Q Consensus 251 ~vp~~~~~~~d~~~l~~~i~~---~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~--~~~~~~ 322 (435)
.||+++++++|+++|++++.+ + +.+|+.+.+++.+|.+||+++|.++|++|++|+|||+||||..+ ++.+
T Consensus 167 ~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~-- 244 (373)
T PF00282_consen 167 KIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYR-- 244 (373)
T ss_dssp EE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTG--
T ss_pred EecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccccc--
Confidence 999999999999999999864 2 55899999999999999999999999999999999999999443 3221
Q ss_pred CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCchHH
Q psy10210 323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSGGII 393 (435)
Q Consensus 323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~~~i 393 (435)
.+.+....+||+++|+|||++.|.++|+++++++..+...+...++|.+ +.+...++.+|| +...
T Consensus 245 -----~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~a 318 (373)
T PF00282_consen 245 -----HLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRA 318 (373)
T ss_dssp -----GGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHH
T ss_pred -----ccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-cchH
Confidence 2455566789999999999999999999999999876655545666665 235668899999 4445
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+.+|++|+.+|.+||.+++++..+.++++.+.+.+
T Consensus 319 lk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~ 353 (373)
T PF00282_consen 319 LKLWATLKSLGREGYRERIRRCIELARYLADRLRK 353 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 69999999999999999999999988877766544
No 4
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.4e-39 Score=325.64 Aligned_cols=314 Identities=23% Similarity=0.389 Sum_probs=255.2
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccc-cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210 105 LELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAV-YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM 183 (435)
Q Consensus 105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 183 (435)
..+|+.+.+++++++.+...+..+... ++.+.+.. ....|++.+++...+.. |..+|..+|...++|+++++|
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyld~~a--~~~~~~~~tt~~~p~~~~~~~~~l~~----~~~np~s~~~~~~le~~~~~~ 88 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSLDGNP--RLNLATFVTTWMEPEARKLMDETINK----NMIDKDEYPQTAEIENRCVNM 88 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhhcCCc--ceeeeeeeCCCCCHHHHHHHHHHHhc----CCCCcccCccHHHHHHHHHHH
Confidence 478999999999999999776543222 23333333 33478888888887764 344556678888999999999
Q ss_pred HHHHhCCC-C--CCceEEcCChHHHHHHHHHHHHHHhhh---hcC--CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 184 CARMFNGG-P--ETCGCMTSGGTESIMMACKAYRDYARE---EKG--ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 184 la~l~g~~-~--~~~~~~t~ggteai~~a~~a~~~~~~~---~~g--~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
+++++|++ + +..+.+|+|||||+++++.+++..... ..| ..++.|++++.+|+++.++++.+|++++.||++
T Consensus 89 la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d 168 (431)
T TIGR01788 89 LADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMD 168 (431)
T ss_pred HHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecC
Confidence 99999998 2 223456899999999999988754211 112 335689999999999999999999999999998
Q ss_pred CC-ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc------CCcEEEeccccchhhhcccccCCCCCC
Q psy10210 256 SS-YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY------GIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 256 ~~-~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~------~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
++ +.+|+++|+++++++|.+|+++++||.+|.++|+++|+++|+++ |+++|+|+||+++..+|.- +..+
T Consensus 169 ~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~----~~~~ 244 (431)
T TIGR01788 169 PGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVY----PDLE 244 (431)
T ss_pred CCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhC----CCch
Confidence 65 68999999999999999999999999999999999999999999 9999999999999987642 2336
Q ss_pred CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210 329 FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ 408 (435)
Q Consensus 329 ~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~ 408 (435)
+++...++|++++|+|||+++|+|+|++++++++.....+...++|.++...+.++.+||++..+++.|+.++.+|.+||
T Consensus 245 ~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~ 324 (431)
T TIGR01788 245 WDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGY 324 (431)
T ss_pred hhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHH
Confidence 77778899999999999988999999999998764433344466788876666789999998666689999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q psy10210 409 VWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 409 ~~~~~~~~~~~~~~~~~l~~ 428 (435)
.+.+++..+.++++.+.|.+
T Consensus 325 ~~i~~~~~~la~~l~~~L~~ 344 (431)
T TIGR01788 325 RKIMQNSLDVARYLAEEIAK 344 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999988887777665543
No 5
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.2e-38 Score=324.58 Aligned_cols=318 Identities=17% Similarity=0.194 Sum_probs=260.2
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+...+|+.+.+.+++++++.+.+.....+|.++.+.+..+ +.+.....+.+++....+.+...++.+|...++|.++.+
T Consensus 99 l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~-~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~ 177 (539)
T PLN02590 99 LPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYA-SSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLD 177 (539)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEecc-CCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHH
Confidence 3457789999999999999999998888998887777654 455556677777777667778899999999999999999
Q ss_pred HHHHHhCCCCC------CceEEcCChHHHHHHHHHHHHHHhhhhcC---CCCCeEEEeCCCchhHHHHHHHcCC---EEE
Q psy10210 183 MCARMFNGGPE------TCGCMTSGGTESIMMACKAYRDYAREEKG---ISLPEIVLPTTAHPAFDKAANYFGM---KVK 250 (435)
Q Consensus 183 ~la~l~g~~~~------~~~~~t~ggteai~~a~~a~~~~~~~~~g---~~~~~viv~~~~~~~~~~~~~~~g~---~v~ 250 (435)
|+++++|.++. ..+++|+|||+|+..++.++|+...++.| .++..|++++.+|+++.++++.+|+ +++
T Consensus 178 wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr 257 (539)
T PLN02590 178 WLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIR 257 (539)
T ss_pred HHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEE
Confidence 99999999864 46999999999999999999886544333 3455778899999999999999998 589
Q ss_pred EEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210 251 HIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA 322 (435)
Q Consensus 251 ~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~ 322 (435)
.||+| .++++|+++|+++|.+ .+.+|+.+.+++.+|.+||+++|+++|++||+|+|||+||||+++.+.+..
T Consensus 258 ~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r 337 (539)
T PLN02590 258 LLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYR 337 (539)
T ss_pred EEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhH
Confidence 99998 4689999999999964 368999999999999999999999999999999999999999987554322
Q ss_pred CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCchHH
Q psy10210 323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSGGII 393 (435)
Q Consensus 323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~~~i 393 (435)
.+......+||+++|+|||++.|.+||+++++++......+...++|.. ..+...++.+||++.+
T Consensus 338 -----~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~ra- 411 (539)
T PLN02590 338 -----KFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRS- 411 (539)
T ss_pred -----HHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHH-
Confidence 2223345679999999999999999999999997543222222222221 1245567889999876
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+..|++|+.+|.+||.+++++..+.++++.+.+.
T Consensus 412 LklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~ 445 (539)
T PLN02590 412 LKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVA 445 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5999999999999999999999998887766553
No 6
>PLN02263 serine decarboxylase
Probab=100.00 E-value=4.6e-38 Score=312.63 Aligned_cols=294 Identities=21% Similarity=0.229 Sum_probs=234.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcCh----hHHHHHHHHHHHHHHHhC
Q psy10210 114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFP----GVCKMEAEVIKMCARMFN 189 (435)
Q Consensus 114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~~la~l~g 189 (435)
.+++++.+.+.+.....+ .++| ++....+ -..+.+.+. +...|...|-.++ ..+++|.++.+|+++++|
T Consensus 75 ~~~~l~~~~~~~~~~~~~----~~gY-p~n~~~d-~s~l~~~l~-~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g 147 (470)
T PLN02263 75 MASVLARYRKTLVERTKH----HLGY-PYNLDFD-YGALGQLQH-FSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 147 (470)
T ss_pred HHHHHHHHHHHHHhcccc----eeCC-CCcccCC-hhhHHHHHH-hhccCCCCccccCCcchhHHHHHHHHHHHHHHHhC
Confidence 477888888887765433 3344 3332111 122333332 2334455555554 699999999999999999
Q ss_pred CCC-CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHH
Q psy10210 190 GGP-ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSA 268 (435)
Q Consensus 190 ~~~-~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~ 268 (435)
.++ +..+++|+|||||+.+++.++|+... ++.+++++.+|+++.|+++++|++++.||+++++++|+++|+++
T Consensus 148 ~p~~~~~G~vtsGGTEaNL~Al~aARe~~~------~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~aL~~a 221 (470)
T PLN02263 148 IEKNEYWGYITNCGTEGNLHGILVGREVFP------DGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCADFKAK 221 (470)
T ss_pred CCCCCCeEEEeCcHHHHHHHHHHHHHhhcC------CcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHHHHHHH
Confidence 976 34799999999999999999998532 24689999999999999999999999999999999999999999
Q ss_pred hhcC---ceEEEEeCCCCCcccccCHHHHHHHHHHcCC-----cEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 269 ITGN---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI-----PVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 269 i~~~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~-----~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
|.++ +.+|+.+.+++++|.+||+++|+++|++||+ |+|||+||||+++||.+.. +++++..+ +||++
T Consensus 222 I~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~----~~~df~~~-vDSIs 296 (470)
T PLN02263 222 LLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA----PKVTFKKP-IGSVS 296 (470)
T ss_pred HHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc----cccCCCcC-ccEEE
Confidence 9754 5788899999999999999999999999997 9999999999999987652 46888765 99999
Q ss_pred ecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy10210 341 VDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYK 420 (435)
Q Consensus 341 ~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~ 420 (435)
+|+|||++.|.++|+++++++.+. .+...++|... ...++.|||++...+.+|++|+.+|.+||.++++++.+.++
T Consensus 297 vD~HK~l~~P~~cgvll~R~~~~~--~~~~~~~Yl~~--~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~ 372 (470)
T PLN02263 297 VSGHKFVGCPMPCGVQITRMEHIN--VLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAH 372 (470)
T ss_pred ECCccccCCCcCEEEEEEehhhHh--hhccChHhhCC--CCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999999999999999999975431 11223344333 23578999999877899999999999999999999999988
Q ss_pred HHHHhcCCc
Q psy10210 421 SCLQNLSDL 429 (435)
Q Consensus 421 ~~~~~l~~l 429 (435)
++.+.+.+.
T Consensus 373 ~l~~~l~~~ 381 (470)
T PLN02263 373 YLKDRLREA 381 (470)
T ss_pred HHHHHHHhC
Confidence 887776543
No 7
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=6.5e-37 Score=300.42 Aligned_cols=253 Identities=21% Similarity=0.262 Sum_probs=211.4
Q ss_pred CCCCCCCc-ChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH
Q psy10210 162 TNPLHPDI-FPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD 239 (435)
Q Consensus 162 ~~~~~~~~-~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~ 239 (435)
+||..... ....+++|+++++++++++|+++++ .+++|+|||||+.+++.++++... ++.|+++..+|+++.
T Consensus 52 gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~------~~~vi~s~~~H~Sv~ 125 (374)
T PLN03032 52 GDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFP------DGILYASRESHYSVF 125 (374)
T ss_pred CCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCC------CcEEEeCCCceeHHH
Confidence 44544322 2468999999999999999998764 479999999999999998875421 236999999999999
Q ss_pred HHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcC-----CcEEEeccc
Q psy10210 240 KAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-----IPVHVDCCL 311 (435)
Q Consensus 240 ~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-----~~livD~~~ 311 (435)
++++.+|++++.||++++|.+|+++|+++|++ +|.+|+++.++|++|.+||+++|+++|++|| +|+|+|+|+
T Consensus 126 kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~ 205 (374)
T PLN03032 126 KAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGAL 205 (374)
T ss_pred HHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccc
Confidence 99999999999999999999999999999987 4789999999999999999999999999996 589999999
Q ss_pred cchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCch
Q psy10210 312 GGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGG 391 (435)
Q Consensus 312 ~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~ 391 (435)
+++..+|... .+++++.. ++|++++|+||++++|+|+|+++++++.+. . .....+|... ...++.|||++.
T Consensus 206 gg~~~p~~~~----~~~~~~~~-~vDSis~s~HK~~g~P~g~G~ll~r~~~~~-~-~~~~~~Yl~~--~d~ti~gSR~g~ 276 (374)
T PLN03032 206 FGLMMPFVSR----APEVTFRK-PIGSVSVSGHKFLGCPMPCGVALTRKKHVK-A-LSQNVEYLNS--RDATIMGSRNGH 276 (374)
T ss_pred hhhhhhccCC----CcccCCCc-CCcEEEECcccccCCCcCeEEEEEEchhhH-h-hccCCcccCC--CCCcccCCCchH
Confidence 9999887643 23567764 799999999999877999999999975442 1 1123333332 236789999998
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 392 IIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 392 ~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
..+++|++|+.+|.+||.+.++++.+.++++.+.|.+.
T Consensus 277 ~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 277 APLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88899999999999999999999999988887776543
No 8
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=3.3e-36 Score=306.70 Aligned_cols=322 Identities=16% Similarity=0.182 Sum_probs=251.9
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+...+|+.+.+.+++++++.+.+.....+|.++.+.+..+. .+.....+++++....+.+...++.+|...++|.++.+
T Consensus 51 ~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~-~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~ 129 (490)
T PLN02880 51 LPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPS-NSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLD 129 (490)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccC-CCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHH
Confidence 34467888899999999999988888888988877776544 34445677777776656667778889999999999999
Q ss_pred HHHHHhCCCCC------CceEEcCChHHHHHHHHHHHHHHhhhhcC---CCCCeEEEeCCCchhHHHHHHHcCCE---EE
Q psy10210 183 MCARMFNGGPE------TCGCMTSGGTESIMMACKAYRDYAREEKG---ISLPEIVLPTTAHPAFDKAANYFGMK---VK 250 (435)
Q Consensus 183 ~la~l~g~~~~------~~~~~t~ggteai~~a~~a~~~~~~~~~g---~~~~~viv~~~~~~~~~~~~~~~g~~---v~ 250 (435)
|+++++|.+.. ..+++|+|||+|+.+++.++|+......| .++..|++++.+|+++.+++..+|+. ++
T Consensus 130 wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~ 209 (490)
T PLN02880 130 WLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCR 209 (490)
T ss_pred HHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEE
Confidence 99999999864 35899999999999999999986543333 34557888999999999999999994 88
Q ss_pred EEecCC--CccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210 251 HIRLTS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA 322 (435)
Q Consensus 251 ~vp~~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~ 322 (435)
.||+|. ++++|+++|+++|.+ .+.+|+.+.+++.+|.+||+++|+++|++||+|+|||+|||++++...
T Consensus 210 ~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~--- 286 (490)
T PLN02880 210 LLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICP--- 286 (490)
T ss_pred EeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCH---
Confidence 999974 679999999999964 368999999999999999999999999999999999999999876432
Q ss_pred CCCCCCCCCC---CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC---------CCCCCCccccCCCc
Q psy10210 323 GYPLPPFDFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG---------GNYGSPSVSGSRSG 390 (435)
Q Consensus 323 g~~~~~~d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g---------g~~~~~~~~gsr~~ 390 (435)
.++.. ..++||+++|+|||++.|.++|+++++++......+...++|.. ..+...++..+|+.
T Consensus 287 -----~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~ 361 (490)
T PLN02880 287 -----EYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRF 361 (490)
T ss_pred -----HHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcc
Confidence 11211 23579999999999999999999999986543222212222211 11333557678888
Q ss_pred hHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH---hcCCcccccC
Q psy10210 391 GIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ---NLSDLWLYLP 434 (435)
Q Consensus 391 ~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~---~l~~l~~~~p 434 (435)
.++ ..|++++.+|.++|.+++++..+.++++.+ +.++++...|
T Consensus 362 ~al-klw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~ 407 (490)
T PLN02880 362 RSL-KLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP 407 (490)
T ss_pred cHH-HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC
Confidence 775 999999999999999999966666555544 4455554433
No 9
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=5.7e-36 Score=295.89 Aligned_cols=242 Identities=24% Similarity=0.377 Sum_probs=208.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK 250 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~ 250 (435)
..+++|+++++++++++|+++++ .+++|+|||||+..++.+.++... +++|++++.+|+++.++++.+|++.+
T Consensus 62 ~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~------~~~ii~s~~~H~Sv~ka~~~lg~~~~ 135 (380)
T PRK02769 62 NSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFP------DGTLYYSKDTHYSVSKIARLLRIKSR 135 (380)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCC------CcEEEeCCCceehHHHHHHHcCCCCc
Confidence 47899999999999999997553 579999999999999988775321 35799999999999999999999999
Q ss_pred EEecCCCccccHHHHHHHhhcC---ceEEEEeCCCCCcccccCHHHHHHHHHHcC---CcEEEeccccchhhhcccccCC
Q psy10210 251 HIRLTSSYTVDLAALQSAITGN---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYG---IPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 251 ~vp~~~~~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~---~~livD~~~~~~~~~~~~~~g~ 324 (435)
.||++++|.+|+++|+++++++ |.+|++++++|++|.++|+++|+++|++|| +++|+|+||+++..+|.+..
T Consensus 136 ~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~-- 213 (380)
T PRK02769 136 VITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNP-- 213 (380)
T ss_pred eeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCcc--
Confidence 9999888999999999999886 999999999999999999999999999998 69999999999999887542
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
+++|+.. ++|++++|+|||+++|.|+|+++++++.+... ....+|... ...++.|||++..++++|++|+.+|
T Consensus 214 --~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~--~~~~~yl~~--~d~t~~GSR~g~~~l~lw~aL~~lg 286 (380)
T PRK02769 214 --PPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERI--SVDVDYIGS--RDQTISGSRNGHTALLLWAAIRSLG 286 (380)
T ss_pred --ccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhc--ccCccccCC--CCCCccCCCCcHHHHHHHHHHHHHC
Confidence 3688877 99999999999988899999999997654321 112334332 2357899999988889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 405 FEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
.+||.+.++++.+.++++.++|..
T Consensus 287 ~~G~~~~~~~~~~la~~l~~~L~~ 310 (380)
T PRK02769 287 SKGLRQRVQHCLDMAQYAVDRLQA 310 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999998888877754
No 10
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=2.3e-35 Score=301.00 Aligned_cols=321 Identities=19% Similarity=0.257 Sum_probs=254.0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHH
Q psy10210 104 FLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKM 183 (435)
Q Consensus 104 ~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 183 (435)
...+|+.+.+.+++++.+.+.+.....+|.++.+.+....+.|.+...+.+ +....+.|.+.++.+|...++|.++.+|
T Consensus 59 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~w 137 (522)
T TIGR03799 59 SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGM 137 (522)
T ss_pred ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHH
Confidence 346899999999999999888888889999888888887775655444554 3334456788899999999999999999
Q ss_pred HHHHhCCC------------CCCceEEcCChHHHHHHHHHHHHHHhhhh---------c---------CCCCCeEEEeCC
Q psy10210 184 CARMFNGG------------PETCGCMTSGGTESIMMACKAYRDYAREE---------K---------GISLPEIVLPTT 233 (435)
Q Consensus 184 la~l~g~~------------~~~~~~~t~ggteai~~a~~a~~~~~~~~---------~---------g~~~~~viv~~~ 233 (435)
++++++.. ....+++|+|||+|+..|+.++|+..... . |.++..|++++.
T Consensus 138 l~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~ 217 (522)
T TIGR03799 138 MHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSER 217 (522)
T ss_pred HHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCC
Confidence 99998532 22468999999999999999999864211 1 224678999999
Q ss_pred CchhHHHHHHHcCC---EEEEEecCCCccccHHHHHHHhh----cC--ceEEEEeCCCCCcccccCHHHHHHHHHHcCCc
Q psy10210 234 AHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAIT----GN--TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP 304 (435)
Q Consensus 234 ~~~~~~~~~~~~g~---~v~~vp~~~~~~~d~~~l~~~i~----~~--~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~ 304 (435)
+|+++.++++.+|+ +++.||+|+++++|+++|+++|. ++ +.+|+.+.+++.+|.+||+++|+++|++||+|
T Consensus 218 ~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~ 297 (522)
T TIGR03799 218 GHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCH 297 (522)
T ss_pred chHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCe
Confidence 99999999999998 79999999999999999999986 23 45666668899999999999999999999999
Q ss_pred EEEeccccchhhhcccccCCCCCCCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----CCCC
Q psy10210 305 VHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP----GGNY 379 (435)
Q Consensus 305 livD~~~~~~~~~~~~~~g~~~~~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~----gg~~ 379 (435)
+|||+||+++...+.+.. ..+. ..++|++++|+|||+++|.|+|+++++++.+.+. +...++|. +..+
T Consensus 298 lHVDaA~gg~~~~~~~~r------~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~-~~~~~~Yl~~~~~~d~ 370 (522)
T TIGR03799 298 FHVDAAWGGATLLSNTYR------HLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSA-IEHHAEYILRKGSKDL 370 (522)
T ss_pred EEEEchhhhHHHhCHHHH------HHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHH-hccCcchhcCCCCCcc
Confidence 999999998766432111 1122 2368999999999999999999999999876432 22223342 2235
Q ss_pred CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc---CCccccc
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL---SDLWLYL 433 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l---~~l~~~~ 433 (435)
+..++.|||++.++ +.|++++.+|.+||.+.+++..+.++++.+.+ ++++++.
T Consensus 371 ~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~ 426 (522)
T TIGR03799 371 GSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT 426 (522)
T ss_pred ccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec
Confidence 56788999999875 79999999999999999999888877776654 4555443
No 11
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.2e-33 Score=288.63 Aligned_cols=317 Identities=21% Similarity=0.332 Sum_probs=248.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHH
Q psy10210 108 PSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCAR 186 (435)
Q Consensus 108 P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~ 186 (435)
.......+++++++.+.+..+...|.++ .+-+..+. .+.+...+++.+....+.|...++.+|...++|.++.+|+|+
T Consensus 56 ~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~-~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~ 134 (608)
T TIGR03811 56 TKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGHMNS-ETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFAT 134 (608)
T ss_pred ccCccCHHHHHHHHHHHHhcCCCCCCCccceEEECcC-CCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHH
Confidence 3333567899999999888777888766 65555543 555666677777777777888999999999999999999999
Q ss_pred HhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh----hc-----------------------------------------
Q psy10210 187 MFNGGPETCGCMTSGGTESIMMACKAYRDYARE----EK----------------------------------------- 221 (435)
Q Consensus 187 l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~----~~----------------------------------------- 221 (435)
++|.++. .+.+|+|||+|+..++.++|+...- +.
T Consensus 135 l~G~~~~-~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~ 213 (608)
T TIGR03811 135 LMGYKNG-WGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSA 213 (608)
T ss_pred HhCCCCC-CeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcc
Confidence 9999874 8999999999999999999875310 00
Q ss_pred ----CCCC-CeEEEeCCCchhHHHHHHHcCC---EEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCccc
Q psy10210 222 ----GISL-PEIVLPTTAHPAFDKAANYFGM---KVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGT 287 (435)
Q Consensus 222 ----g~~~-~~viv~~~~~~~~~~~~~~~g~---~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~ 287 (435)
...+ .+++++...|+++.+++..+|+ .++.||+|+++++|+++|+++|.+ .+.+|+.+.+++.+|.
T Consensus 214 ~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Ga 293 (608)
T TIGR03811 214 RSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGA 293 (608)
T ss_pred ccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcc
Confidence 0111 2689999999999999999999 599999999999999999999864 3678999999999999
Q ss_pred ccCHHHHHHHH---HHcCC--cEEEeccccchhhh-cccccCCCCCCCC-----------C----------------CCC
Q psy10210 288 MDDIGAIAKLG---EKYGI--PVHVDCCLGGFLAP-FMSAAGYPLPPFD-----------F----------------SLP 334 (435)
Q Consensus 288 ~~~i~~i~~la---~~~~~--~livD~~~~~~~~~-~~~~~g~~~~~~d-----------~----------------~~~ 334 (435)
+||+++|+++| +++|+ |+|||+||||++.+ +....+... |++ | ...
T Consensus 294 iDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~-p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle 372 (608)
T TIGR03811 294 VDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFI-PYDDLQEVHAEYGVFTEKKEYISREVYNAYKAIS 372 (608)
T ss_pred cCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccccc-ccchhhcccccccccccccccccHhHHHHHhcCc
Confidence 99999999999 67888 69999999998632 222111100 110 1 135
Q ss_pred CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC---C----CCCCCCccccCCCchHHHHHHHHHHHh--cH
Q psy10210 335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP---G----GNYGSPSVSGSRSGGIIATCWAAMMYF--GF 405 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~---g----g~~~~~~~~gsr~~~~ia~~~a~l~~~--g~ 405 (435)
++||+++|+||+|+.|+++|++++|++.+++.. ....+|. + ...+..++.|||+++..+++|++++.+ |.
T Consensus 373 ~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~-~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~ 451 (608)
T TIGR03811 373 EAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVI-SYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNV 451 (608)
T ss_pred CceEEEeCcccccccCCCeEEEEEeCHHHHHHH-hcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCH
Confidence 689999999999999999999999999754421 1122221 1 123456789999998778999999998 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 406 EAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 406 ~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+||.+.+++..+.++.+.+.|..
T Consensus 452 ~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 452 TGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999998887776654
No 12
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.98 E-value=4e-30 Score=255.75 Aligned_cols=299 Identities=32% Similarity=0.517 Sum_probs=231.1
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210 112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191 (435)
Q Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~ 191 (435)
.++.++++.+.++.++ +..+. ..++.......|.+++++.+++... ...+..+++..+++.++++++++++|.+
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 2 LSEEEILEELEEYRSE-DLKYE-RILSSMCTEPHPIARKAHEMFLETN----LGDPGLFPGTAKLEEEAVEMLGELLHLP 75 (371)
T ss_pred CCHHHHHHHHHHHHhc-CCCHH-HeeeeeecCchHHHHHHHHHHHhcC----CCCcccCccHHHHHHHHHHHHHHHhCCC
Confidence 5688999999998876 44443 2444444445888888888877652 2222335678888999999999999987
Q ss_pred CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG 271 (435)
Q Consensus 192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~ 271 (435)
+. ++++|+||++++..+++++++.... ++++|++++++|+++.+.++..|++++.+|+++++.+|++++++++++
T Consensus 76 ~~-~~~~~~ggt~a~~~a~~~~~~~~~~----~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 150 (371)
T PRK13520 76 DA-YGYITSGGTEANIQAVRAARNLAKA----EKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDD 150 (371)
T ss_pred CC-CeEEecCcHHHHHHHHHHHHhhccC----CCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhh
Confidence 65 7899999999999999988754211 234699999999999999999999999999988888999999999998
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC
Q psy10210 272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK 351 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~ 351 (435)
++++|++++++|++|.+.|+++|.++|++||+++|+|++|+++..++... ...+++...++|++++++|||+.+|.
T Consensus 151 ~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~----~~~~~~~~~~vd~~~~s~~K~~~a~~ 226 (371)
T PRK13520 151 NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDD----PPNFDFSLPGVDSITIDPHKMGLAPI 226 (371)
T ss_pred CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcC----CCCccccCCCCceEEECCccccCccC
Confidence 89888888999999999999999999999999999999999887654321 12456666789999999999988888
Q ss_pred CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 352 GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 352 g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
++|+++++++++.+... ...+|..+. ......|++++..+++++++++.++.+++.+..++..+..+.+.+.|.
T Consensus 227 ~~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~ 300 (371)
T PRK13520 227 PAGGILFRDESYLDALA-VDTPYLTSK-KQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELK 300 (371)
T ss_pred CceEEEEcCHHHHHhhc-ccCccccCC-CCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888876554321 122232221 123456788888888999999999888877776666666655555444
No 13
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.97 E-value=6.7e-30 Score=245.09 Aligned_cols=259 Identities=24% Similarity=0.279 Sum_probs=202.9
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcCh-hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFP-GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.|++.+++...+... ++||...+.+. ..+++.++.|+.+|+++|+++ .+++|||||||+++++++........ + .
T Consensus 14 ~~~v~~~m~~~~~~~-fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~g~~~a~~~-~-~ 89 (386)
T COG1104 14 DPEVLEAMLPYLTEV-FGNPSSLHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIKGAALAYRN-A-Q 89 (386)
T ss_pred CHHHHHHHHHHHHhh-cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC-CeEEEecCCcHHHHHHHHhhHHhhhc-c-c
Confidence 788888888888776 66777665553 678899999999999999999 49999999999999999985433322 1 2
Q ss_pred CCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
++.+||++..+|+++.+.++++ |.+|.++|++.+|.+|+++|+++++++|.+|.+.+.||.+|++.|+++|+++|++
T Consensus 90 ~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~ 169 (386)
T COG1104 90 KGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKE 169 (386)
T ss_pred CCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHH
Confidence 3457999999999999999988 9999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
+++++|+|++++- +..|+|+...++|++++|.||+ +||+|+|+++++ +... ..|...||.
T Consensus 170 ~~i~fHvDAvQa~-----------Gkipi~~~~~~vD~ls~SaHK~-~GpkGiGaLyv~-~~~~-----~~p~i~GGg-- 229 (386)
T COG1104 170 RGILFHVDAVQAV-----------GKIPIDLEELGVDLLSFSAHKF-GGPKGIGALYVR-PGVR-----LEPLIHGGG-- 229 (386)
T ss_pred cCCeEEEehhhhc-----------CceeccccccCcceEEeehhhc-cCCCceEEEEEC-CCCc-----cCceeccCc--
Confidence 9999999999853 3448899888999999999999 799999997774 3332 244455553
Q ss_pred CCccccCCCc----hHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhc-CCc
Q psy10210 381 SPSVSGSRSG----GIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNL-SDL 429 (435)
Q Consensus 381 ~~~~~gsr~~----~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l-~~l 429 (435)
+..|-|+| ..+++.-.+++.. ..+...+++.++++.+.+.+.+. +.+
T Consensus 230 --QE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~ 283 (386)
T COG1104 230 --QERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDV 283 (386)
T ss_pred --CCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 33444444 3343333333222 23445566666666666666643 443
No 14
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=7.4e-29 Score=246.88 Aligned_cols=304 Identities=32% Similarity=0.555 Sum_probs=223.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCccccccc-CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210 114 RLEILELVSNYLARGHYDWKHGRVSGAVY-YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP 192 (435)
Q Consensus 114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~ 192 (435)
.+++++++.++.. +..++.++....... ...|...+++...+... ..+ +..+++..+++.++++++++++|+++
T Consensus 2 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (373)
T TIGR03812 2 EEEVLEELKEYRS-EDLKYSDGRILGSMCTNPHPIAVKAYDMFIETN-LGD---PGLFPGTKKIEEEVVGSLGNLLHLPD 76 (373)
T ss_pred HHHHHHHHHHHHh-cCCCCCCCcEEEEEeCCchHHHHHHHHHHhhcC-CCC---cccCccHHHHHHHHHHHHHHHhCCCC
Confidence 5788888888544 445554444222222 23555566666655442 122 23356778899999999999999976
Q ss_pred CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC
Q psy10210 193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN 272 (435)
Q Consensus 193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~ 272 (435)
. ++++++|+++++.+++.+++.... .+.++++|++++++|.++.++++..|++++.+|+++++.+|+++++++++++
T Consensus 77 ~-~~~~~~g~~~~~~~~~~~~~~~~~--~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~ 153 (373)
T TIGR03812 77 A-YGYIVSGGTEANIQAVRAAKNLAR--EEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDN 153 (373)
T ss_pred C-CeEEeccHHHHHHHHHHHHHHHHh--ccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhC
Confidence 5 788899999999999888764211 1112346999999999999999999999999999888889999999999888
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC
Q psy10210 273 TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG 352 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g 352 (435)
+..++...++||+|.+.++++|.++|+++|+++|+|++|+++..++... |...+++++...++|++++++|||+++|.+
T Consensus 154 ~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~-~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~ 232 (373)
T TIGR03812 154 TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKK-GYNPPPFDFSLPGVQSITIDPHKMGLSPIP 232 (373)
T ss_pred cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhc-CCCCCCccccCCCCCEEEECccccCCCcCC
Confidence 8655655689999999999999999999999999999999887654322 233346677777899999999999888988
Q ss_pred cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 353 SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 353 ~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+|.++++++++.+... ....|..+. ......|+|+...+++++++++.++++++.+..++..+..+++.+.|.+
T Consensus 233 ~G~~~~~~~~~~~~l~-~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 306 (373)
T TIGR03812 233 AGGILFRSKSYLKYLS-VDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKK 306 (373)
T ss_pred ceEEEEeCHHHHhhhc-ccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8887888777654321 122333221 1234457888888889999999999888777666666666655555544
No 15
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3.6e-29 Score=248.56 Aligned_cols=266 Identities=22% Similarity=0.231 Sum_probs=203.9
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH---HHhhh
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR---DYARE 219 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~---~~~~~ 219 (435)
+..+.+++.+.+..+. .|... ........+..++.|+.+++++|+++.++|++|.|+|+++.++..++. .++
T Consensus 35 p~~V~~a~~~~~~~~~-an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~g-- 111 (405)
T COG0520 35 PQAVLDAVAEYYRRYN-ANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPG-- 111 (405)
T ss_pred CHHHHHHHHHHHHhhc-CCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCC--
Confidence 3345555555554331 22221 122345667888999999999999975599999999999999999984 334
Q ss_pred hcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210 220 EKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA 295 (435)
Q Consensus 220 ~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~ 295 (435)
++||+++.+|++ +...++..|++++.+|+++++.+|++++++.++++|++|.+++.+|.||++.|+++|+
T Consensus 112 ------deIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~ 185 (405)
T COG0520 112 ------DEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIA 185 (405)
T ss_pred ------CEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHH
Confidence 459999999999 6667777899999999998999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP 375 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~ 375 (435)
++||++|++++||++|+. ++.++|+...|+|++.+|+|||++||.|+|++++++ ++.... .|...
T Consensus 186 ~la~~~ga~v~VDaaq~~-----------~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~-~~l~~l---~P~~~ 250 (405)
T COG0520 186 ELAHEHGALVLVDAAQAA-----------GHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRK-ELLEEL---EPFLG 250 (405)
T ss_pred HHHHHcCCEEEEECcccc-----------CccCCCchhcCCCEEEEcccccccCCCceEEEEEch-HHHhhc---CCccc
Confidence 999999999999999854 445899999999999999999999999999966665 444432 23333
Q ss_pred CCCCC---C------------CccccCCCchHHH---HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210 376 GGNYG---S------------PSVSGSRSGGIIA---TCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWLYLP 434 (435)
Q Consensus 376 gg~~~---~------------~~~~gsr~~~~ia---~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p 434 (435)
||... + ....|+.+...+. ++...++.+|.+.+.++.+++.+++.+.+++++++..|.|
T Consensus 251 gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~ 327 (405)
T COG0520 251 GGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGP 327 (405)
T ss_pred CCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Confidence 33210 0 1122344333333 3344455667777888888888888999999999988875
No 16
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=3.4e-28 Score=239.50 Aligned_cols=240 Identities=36% Similarity=0.486 Sum_probs=191.5
Q ss_pred HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC-CCCceEEcCChHHHHHHHHHHHHHHhhhh---c---CC
Q psy10210 151 LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG-PETCGCMTSGGTESIMMACKAYRDYAREE---K---GI 223 (435)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~-~~~~~~~t~ggteai~~a~~a~~~~~~~~---~---g~ 223 (435)
.+.+.+....+.+...++.++...++|+++++++++++|.+ ++.++++|+|||+|+.+++.+++.+...+ . ..
T Consensus 14 ~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~ 93 (345)
T cd06450 14 LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGI 93 (345)
T ss_pred HHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccccccc
Confidence 33333333323333446678899999999999999999987 44589999999999999999987642110 0 11
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKL 297 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~l 297 (435)
.+++|++++++|+++.++++..|++++.+|+++++.+|++++++++++ +++++++++++||+|.++++++|.++
T Consensus 94 ~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~ 173 (345)
T cd06450 94 DKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADL 173 (345)
T ss_pred CCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHH
Confidence 234789999999999999999999999999987789999999999987 88999999999999999999999999
Q ss_pred HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377 (435)
Q Consensus 298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg 377 (435)
|++||+++|+|++|+.+..++.... ..+....++|++++|+||++++|.|+|+++++
T Consensus 174 ~~~~~~~l~vD~a~~~~~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------------ 230 (345)
T cd06450 174 AEKYDLWLHVDAAYGGFLLPFPEPR-----HLDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------ 230 (345)
T ss_pred HHHhCCeEEEechhhHHHhhChhhH-----HHhcCccccCEEEEchhHhhCCCcchHHHHHH------------------
Confidence 9999999999999998876432211 11223357899999999998899999986554
Q ss_pred CCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 378 NYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
++++|++++.++.+++.++.++..+..+++.+.|.+
T Consensus 231 ---------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 266 (345)
T cd06450 231 ---------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRA 266 (345)
T ss_pred ---------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 368899999999999998888887776666665544
No 17
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=7.8e-27 Score=231.64 Aligned_cols=268 Identities=19% Similarity=0.181 Sum_probs=198.2
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC-CC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH-PD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~-~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.+++.+++.+.+... +.||.. .. ......++..++++.+++++|.+++ ++++|+|+|+++.+++.++......
T Consensus 12 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~~~~~~~~--- 86 (364)
T PLN02651 12 DPRVLDAMLPFLIEH-FGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKGVMHFYKD--- 86 (364)
T ss_pred CHHHHHHHHHHHHhC-CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhccC---
Confidence 455666666555432 233322 11 1234567788899999999998765 8999999999999999887532111
Q ss_pred CCCCeEEEeCCCchhHHHHHH---HcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAAN---YFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~---~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++++|++++.+|+++...+. ..|++++.+|+++++.+|+++++++++++++++++++++|+||.+.|+++|.++|+
T Consensus 87 -~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~ 165 (364)
T PLN02651 87 -KKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCR 165 (364)
T ss_pred -CCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHH
Confidence 23469999999998655443 45899999999888889999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
++|+++|+|++++.+.. ++++...|+|++++|+||| ++|.|+|+++++++.+.. ..+.+.||..
T Consensus 166 ~~g~~~~vD~a~~~g~~-----------~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~----l~p~~~g~~~ 229 (364)
T PLN02651 166 EKKVLFHTDAAQAVGKI-----------PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVR----LEPLMSGGGQ 229 (364)
T ss_pred HcCCEEEEEcchhhCCc-----------ccCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCC----CCccccCCCc
Confidence 99999999999975433 6788888999999999999 799999998888754432 2344444433
Q ss_pred CCCccccCCCchHHHHHHHHHHHhcH--HHHHHHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFGF--EAQVWICVRYHFNYKSCLQN-LSDLWLYLP 434 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g~--~g~~~~~~~~~~~~~~~~~~-l~~l~~~~p 434 (435)
......|+.+...++++.++++.+.. +...++.+++.+.+.+.+++ ++++..+.|
T Consensus 230 ~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~ 287 (364)
T PLN02651 230 ERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRAKLGGVRVNGP 287 (364)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECC
Confidence 22234677777777777777776632 44445556666666666553 566666654
No 18
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.4e-26 Score=228.57 Aligned_cols=220 Identities=19% Similarity=0.194 Sum_probs=176.7
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
.+.+..+-|+. ..|+.+.+.+.+.+..+. . +|++..|.++||+++++.+.+.....
T Consensus 30 vi~l~iG~Pd~-~~p~~i~~a~~~a~~~~~------~-~Y~~~~G~~~LReaia~~~~~~~~~~---------------- 85 (393)
T COG0436 30 VIDLSIGEPDF-PTPEHIIEAAIEALEEGG------T-HYTPSAGIPELREAIAEKYKRRYGLD---------------- 85 (393)
T ss_pred EEEeCCCCCCC-CCCHHHHHHHHHHHhccc------C-CCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence 46677788887 778899999998877532 1 55678899999999999999865421
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC---C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT---S 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~---~ 256 (435)
.++++++++|+|+++|+.+++.++.++||+ |++++|.|+.|....+..|++++.+|++ .
T Consensus 86 ----------~~~~~eiivt~Ga~~al~~~~~a~~~pGDe--------Vlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~ 147 (393)
T COG0436 86 ----------VDPEEEIIVTAGAKEALFLAFLALLNPGDE--------VLIPDPGYPSYEAAVKLAGGKPVPVPLDEEEN 147 (393)
T ss_pred ----------CCCCCeEEEeCCHHHHHHHHHHHhcCCCCE--------EEEeCCCCcCHHHHHHhcCCEEEEEeCCcCcc
Confidence 244446999999999999999999999998 9999999999999999999999999975 3
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC-CCCCCCCC
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY-PLPPFDFS 332 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~-~~~~~d~~ 332 (435)
++.+|+++++++++++|++|++++||||||.+ +.+++|+++|++||+++++||+|.++.+. +. ......+.
T Consensus 148 ~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd-----~~~~~s~~~~~ 222 (393)
T COG0436 148 GFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYD-----GAEHPSILELA 222 (393)
T ss_pred CCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccC-----CCCcCCHhhcC
Confidence 79999999999999999999999999999999 77999999999999999999999998762 21 11122222
Q ss_pred CC-CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 333 LP-GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 333 ~~-gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
.. ...+..-|++|.. ..+..+|+++..++++.+.
T Consensus 223 ~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~ 258 (393)
T COG0436 223 GARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAA 258 (393)
T ss_pred CCcceEEEEecccccccccccceeEeecChHHHHHH
Confidence 21 2344455788973 2346689977665655544
No 19
>KOG1549|consensus
Probab=99.95 E-value=3.4e-26 Score=220.27 Aligned_cols=256 Identities=20% Similarity=0.214 Sum_probs=192.6
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~ 223 (435)
++.+.+++.+++..+ +.||...-.+-......++.|+.+|+++|+++. +|+||+|+|||+.++++.... +++ .
T Consensus 56 ~~~Vldam~~~~~~~-~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~-dIiFts~ATEs~Nlvl~~v~~~~~~----~ 129 (428)
T KOG1549|consen 56 DPRVLDAMLPYLLEY-LGNPHSRSYGWKAEDAVEAAREQVAKLINADPS-DIVFTSGATESNNLVLKGVARFFGD----K 129 (428)
T ss_pred CHHHHHHHHHHHHHh-hcCCCccccchhhhHHHHHHHHHHHHHhCCCCC-cEEEeCCchHHHHHHHHHhhccccc----c
Confidence 788999999888765 456655512223334466789999999999998 599999999999999998742 232 1
Q ss_pred CCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
.+.+||+.+.+|++....++.+ |++++.+|++.++.+|++.++++|+++|+++.+.+.+|.+|++.|+++|.++|++
T Consensus 130 ~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~ 209 (428)
T KOG1549|consen 130 TKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQPVKEIVKICRE 209 (428)
T ss_pred ccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCccccccHHHHHHHhCc
Confidence 2337999999999988777665 9999999999889999999999999999999999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
+++.+|+|+||+ .++.++|....++|+++++.||| ++|+|+|+++++.+.- .....|...||.-.
T Consensus 210 ~~v~v~~DaAQa-----------vG~i~vDV~eln~D~~s~s~HK~-ygp~~iGaLYvr~~~~---~~~~~p~~~GGgq~ 274 (428)
T KOG1549|consen 210 EGVQVHVDAAQA-----------VGKIPVDVQELNADFLSISAHKI-YGPPGIGALYVRRKRP---RLRVEPPLSGGGQE 274 (428)
T ss_pred CCcEEEeehhhh-----------cCCccccHHHcCchheeeecccc-cCCCcceEEEEccCCC---cccccCcccCCccc
Confidence 999999999995 44568999999999999999999 7898899988886221 22246777777432
Q ss_pred CCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHH
Q psy10210 381 SPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKS 421 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~ 421 (435)
..--.|++........=++.+.. .......++++..+.+..
T Consensus 275 r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~ 317 (428)
T KOG1549|consen 275 RGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLM 317 (428)
T ss_pred cccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence 22223444433333333333332 223444555554444443
No 20
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.95 E-value=4e-26 Score=229.86 Aligned_cols=268 Identities=19% Similarity=0.233 Sum_probs=194.1
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.+.+.+++.+++.... .|+.. ....+...+...++++.+++++|..+++++++|+|+|+++.+++.++....-
T Consensus 36 ~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~---- 110 (406)
T PRK09295 36 PSQVIDAEAEFYRHGY-AAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNV---- 110 (406)
T ss_pred CHHHHHHHHHHHHhcC-CCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcC----
Confidence 3455566665554322 23221 1123446677778999999999985445899999999999999987631100
Q ss_pred CCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
.++++|++++++|++ +...++..|++++.+|+++++.+|+++++++++++|++|++++++||||.+.|+++|.++|
T Consensus 111 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~ 190 (406)
T PRK09295 111 RAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALA 190 (406)
T ss_pred CCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHH
Confidence 013459999998876 4556677899999999988888999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
+++|+++++|++|+.+. .++++...++|++++|+||+ +||.|+|++++++ ++.+.. +.+.+|.
T Consensus 191 ~~~~~~vivD~a~~~g~-----------~~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~~~~~g~ 253 (406)
T PRK09295 191 HQHGAKVLVDGAQAVMH-----------HPVDVQALDCDFYVFSGHKL-YGPTGIGILYVKE-ALLQEM----PPWEGGG 253 (406)
T ss_pred HHcCCEEEEEcccccCc-----------cccCchhcCCCEEEeehhhc-cCCCCcEEEEEch-HhHhhC----CCcccCC
Confidence 99999999999986442 25677777899999999995 7899999977665 443321 2222221
Q ss_pred -------------CC---CCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210 379 -------------YG---SPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYLP 434 (435)
Q Consensus 379 -------------~~---~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p 434 (435)
+. ..-..|+++...++++.++++.+ |.+...++.+++.+.+.+.+++++++..+.|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~ 328 (406)
T PRK09295 254 SMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGP 328 (406)
T ss_pred ceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 00 01134677777777777777665 5556666677777777776666776665543
No 21
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=9.2e-26 Score=226.83 Aligned_cols=265 Identities=18% Similarity=0.187 Sum_probs=188.0
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.+.+.+++.+.+... +.|+..... .....+...++++.+++++|.+++ ++++|+|+|+++.+++.++......
T Consensus 16 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l~~~~~~--- 90 (402)
T TIGR02006 16 DPRVAEKMMPYLTEK-FGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAIKGIAHFYKS--- 90 (402)
T ss_pred CHHHHHHHHHHHHhc-CCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhhcC---
Confidence 345555555554332 233332111 112345677888999999998765 8999999999999999887531111
Q ss_pred CCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++++|+++.++|+++..++ +..|++++.+|+++++.+|+++++++++++++++++++++||||.+.|+++|.++|+
T Consensus 91 -~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~ 169 (402)
T TIGR02006 91 -KGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICR 169 (402)
T ss_pred -CCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHH
Confidence 2346999999999977664 345999999999888889999999999989999999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
++|+++|+|++++.+.. ++++...++|++++|+||+ ++|.|+|+++++++..... .+.+.||.+
T Consensus 170 ~~g~~livD~a~a~g~~-----------~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~~~----~~~~~g~~~ 233 (402)
T TIGR02006 170 ERKVFFHVDAAQSVGKI-----------PINVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRVRL----EALIHGGGH 233 (402)
T ss_pred HcCCEEEEEcchhcCCc-----------ccCccccCCCEEEEehhhh-cCCCceEEEEEccCCCCCC----CceecCCCc
Confidence 99999999999864332 5677777899999999997 6899999988887654322 222333332
Q ss_pred CCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
......|+.+...+++..++++.+. .+...++.+++.+.+.+.++.++++..
T Consensus 234 ~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~ 287 (402)
T TIGR02006 234 ERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSIEEVYL 287 (402)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 2222245556555555556665542 333445555555556655555665544
No 22
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=7e-26 Score=227.54 Aligned_cols=240 Identities=20% Similarity=0.213 Sum_probs=179.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCC
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGM 247 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~ 247 (435)
...+...++++.+++++|.++.+++++|+|+|+++.+++.++....-. ++++|++++++|++ +...++..|+
T Consensus 57 ~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~----~gd~Vl~~~~~~~s~~~~~~~~~~~~g~ 132 (398)
T TIGR03392 57 SLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQ----PGDEIIVSEAEHHANLIPWLMVAQQTGA 132 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCC----CCCEEEECCcchhHHHHHHHHHHHHcCc
Confidence 345667789999999999864458999999999999999987421000 13459999999987 4566788899
Q ss_pred EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210 248 KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327 (435)
Q Consensus 248 ~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~ 327 (435)
+++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 133 ~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~----------- 201 (398)
T TIGR03392 133 KVVKLPIGADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG----------- 201 (398)
T ss_pred EEEEEecCCCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----------
Confidence 999999987788999999999999999999999999999999999999999999999999999964322
Q ss_pred CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC----------C-----CCccccCCCchH
Q psy10210 328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY----------G-----SPSVSGSRSGGI 392 (435)
Q Consensus 328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~----------~-----~~~~~gsr~~~~ 392 (435)
+++....++|++++|+||+ ++|.|+|+++.+ +++.+.. +.|.+|.. . ..-..|+.+...
T Consensus 202 ~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~ 275 (398)
T TIGR03392 202 PPDVQALDIDFYAFSGHKL-YGPTGIGVLYGK-TELLEAM----PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAG 275 (398)
T ss_pred CCChhhcCCCEEEEecccc-cCCCceEEEEEc-HHHHhhC----CCeecCCceEeeccccccccCCChhhccCCCCCHHH
Confidence 4566566799999999996 789999996655 4444331 22332210 0 011245666666
Q ss_pred HHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210 393 IATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 393 ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
++++.++++.+ |.+...++.+++.+.+.+.+++++++..+
T Consensus 276 ~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~ 318 (398)
T TIGR03392 276 VIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSF 318 (398)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 66777777665 44455566666666666666666665543
No 23
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=1.6e-25 Score=223.14 Aligned_cols=266 Identities=15% Similarity=0.160 Sum_probs=192.1
Q ss_pred hHhHHHHHHHHHHhhcCCCCC--CCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPL--HPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~--~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
++.+++++.+.+.... .++. .+.......+...++++.+++++|.++.+++++|+|+|+++.+++.++.++++.
T Consensus 13 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~--- 88 (376)
T TIGR01977 13 PDEVYEAMADFYKNYG-GSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDH--- 88 (376)
T ss_pred CHHHHHHHHHHHHhcC-CCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCE---
Confidence 3456666666655421 1111 111112334667788899999999876568999999999999999887666655
Q ss_pred CCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
|+++.++|+++. ..++..|++++.++.+.++.+|+++++++++++++++++++++||||.+.++++|.++|
T Consensus 89 -----vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~ 163 (376)
T TIGR01977 89 -----VITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELA 163 (376)
T ss_pred -----EEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHH
Confidence 999999998864 34556699999999887788999999999988999999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG- 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg- 377 (435)
+++|+++|+|++++.+.. ++++...++|++++++|||+++|.|+|+++++++..... ....|.+.
T Consensus 164 ~~~~~~livD~a~~~g~~-----------~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~---~~~~~~~~~ 229 (376)
T TIGR01977 164 QENGIFFILDAAQTAGVI-----------PIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP---LKSGGTGSH 229 (376)
T ss_pred HHcCCEEEEEhhhccCcc-----------CCCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCc---eecCCCccc
Confidence 999999999999965433 567777899999999999998999999988888753211 11111110
Q ss_pred --CC------CCCccccCCCchHHHHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210 378 --NY------GSPSVSGSRSGGIIATCWAAMMYFGFEA---QVWICVRYHFNYKSCLQNLSDLWLYL 433 (435)
Q Consensus 378 --~~------~~~~~~gsr~~~~ia~~~a~l~~~g~~g---~~~~~~~~~~~~~~~~~~l~~l~~~~ 433 (435)
.+ ......++.+...+++..++++.+...| ..++.+.+.+.+.+.+++++++..+.
T Consensus 230 ~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~ 296 (376)
T TIGR01977 230 SALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYG 296 (376)
T ss_pred cccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 00 0001234556666667777777665544 45555666666666666666655543
No 24
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=2e-25 Score=220.59 Aligned_cols=267 Identities=20% Similarity=0.146 Sum_probs=189.8
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.+.+.+++.+++... +.|+..... .....+...++++.+++++|.+++ ++++|+|+|+++.+++.++..+++. +
T Consensus 11 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l~~~~~~-~- 86 (353)
T TIGR03235 11 DPAVAEAMLPWLLEE-FGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGLARAGEQ-K- 86 (353)
T ss_pred CHHHHHHHHHHHHhc-CCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHHHHhccc-C-
Confidence 456677776666432 234432111 223456778899999999999765 8999999999999999988754332 1
Q ss_pred CCCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
.+++|+++..+|+++... ++..|++++.+|+++++.+|++++++++++++++|++++++||||.+.++++|.++|+
T Consensus 87 -g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~ 165 (353)
T TIGR03235 87 -GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLE 165 (353)
T ss_pred -CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHH
Confidence 124699999999986554 3446999999999888889999999999889999999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
++|+++|+|++++.+.. ++++...++|++++++||| ++|.|+|+++++++.+... ...+.+.++.+
T Consensus 166 ~~~~~~ivD~a~~~g~~-----------~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~--~~~~~~~~~~~ 231 (353)
T TIGR03235 166 AHEAFFHVDAAQVVGKI-----------TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPKA--PLKPIMFGGGQ 231 (353)
T ss_pred HcCCEEEEEchhhcCCc-----------cccccccCCCEEEeehhhc-CCCCceEEEEEccCccccc--ccCceeeCCCC
Confidence 99999999999864433 6677777899999999999 6899999988887643221 11222333222
Q ss_pred CCCccccCCCchHHHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYF--GFEAQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
......|+.+...+++..++++.+ +.+...++.+++.+.+.+.++. .++..
T Consensus 232 ~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~ 284 (353)
T TIGR03235 232 ERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT-LGVKL 284 (353)
T ss_pred cCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-CCeEE
Confidence 222334566666666666676655 3333444444444444444433 34443
No 25
>KOG0628|consensus
Probab=99.95 E-value=6.4e-26 Score=216.84 Aligned_cols=314 Identities=15% Similarity=0.161 Sum_probs=246.1
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
...+...|+.+.+.++|++++.+.+.++..+|.++.+..+-+.| ......+++.+......-.+.+-.+|..+++|.-+
T Consensus 40 ~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa~-~s~~siladmLs~~i~~vGFtW~ssPa~TELE~iv 118 (511)
T KOG0628|consen 40 DLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPAG-NSYPSILADMLSGGIGCVGFTWASSPACTELEVIV 118 (511)
T ss_pred hhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccCc-cchHHHHHHHHhcccccccceeecCcchHHHHHHH
Confidence 34556778888899999999999999999999988766544443 12223333444433333456677789999999999
Q ss_pred HHHHHHHhCCCC--------CCceEEcCChHHHHHHHHHHHHHHhhhh--cCC---------CCCeEEEeCCCchhHHHH
Q psy10210 181 IKMCARMFNGGP--------ETCGCMTSGGTESIMMACKAYRDYAREE--KGI---------SLPEIVLPTTAHPAFDKA 241 (435)
Q Consensus 181 ~~~la~l~g~~~--------~~~~~~t~ggteai~~a~~a~~~~~~~~--~g~---------~~~~viv~~~~~~~~~~~ 241 (435)
-+|++++++.|. +..+++..+++|+.+.++.+.|...-++ .+. .+-.+++++-+|.++.++
T Consensus 119 mDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka 198 (511)
T KOG0628|consen 119 MDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKA 198 (511)
T ss_pred HHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHh
Confidence 999999998763 2478888999999999999988665432 111 134578999999999999
Q ss_pred HHHcCCEEEEEecCCCccccHHHHHHHhhcC------ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210 242 ANYFGMKVKHIRLTSSYTVDLAALQSAITGN------TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315 (435)
Q Consensus 242 ~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~ 315 (435)
+...|++++.+|.|.++.++.+.|+++|.++ +.+++.+.+++.+...|++.+|..+|+++|+|+|||++|+|-.
T Consensus 199 ~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa 278 (511)
T KOG0628|consen 199 CLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSA 278 (511)
T ss_pred HhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhcccc
Confidence 9999999999999999999999999999763 5788888888877788999999999999999999999999876
Q ss_pred hhcccccCCCCCCCCCCCCC---ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-------CCCCCCccc
Q psy10210 316 APFMSAAGYPLPPFDFSLPG---VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-------GNYGSPSVS 385 (435)
Q Consensus 316 ~~~~~~~g~~~~~~d~~~~g---vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-------g~~~~~~~~ 385 (435)
+.+. .++....| +|++.++.|||+..--.|+.+++++.......+...|.+.- ..|...++.
T Consensus 279 ~iCp--------E~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~~~Dyrhwqip 350 (511)
T KOG0628|consen 279 FICP--------EFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGSAPDYRHWQIP 350 (511)
T ss_pred ccCH--------HHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhhccCCCccccccc
Confidence 6433 34433344 59999999999988889999999998555444433333322 235567788
Q ss_pred cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210 386 GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 386 gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~ 424 (435)
-+|++.++ ..|..++.+|-+++++++++..+.+++.-+
T Consensus 351 l~rRfRSL-KlWfv~R~~Gve~lq~~iR~h~~La~~fe~ 388 (511)
T KOG0628|consen 351 LGRRFRSL-KLWFVLRSYGVENLQNYIREHVRLAKEFET 388 (511)
T ss_pred cccchhhH-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 89999886 999999999999999999999887766544
No 26
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.94 E-value=2.1e-25 Score=222.65 Aligned_cols=288 Identities=19% Similarity=0.223 Sum_probs=211.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhCCCCCCC--------CCccccc--------ccCC---hHhHHHHHHHHHHhhcCCCCC
Q psy10210 105 LELPSQGRNRLEILELVSNYLARGHYDWK--------HGRVSGA--------VYYY---QQDLVDLLTEVFGLTSYTNPL 165 (435)
Q Consensus 105 ~~~P~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~--------~~~g---~~~l~~~i~~~~~~~~~~~~~ 165 (435)
..+|++|.+.+.|...+.+....+.++|. ++++++. .++| ..+|.+ .
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~--------------~ 93 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVA--------------P 93 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCcccccc--------------c
Confidence 46799999999999999999888888887 5555444 4444 222222 2
Q ss_pred CCCc--ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH
Q psy10210 166 HPDI--FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA 242 (435)
Q Consensus 166 ~~~~--~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~ 242 (435)
+|.. ++...++..++.+.+++++|.+.....++++||| .++.+++.+++.. +.++++||++..+|.+..+++
T Consensus 94 q~ka~gss~~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----~~~gd~VI~p~~th~S~~kAi 168 (444)
T TIGR03531 94 QPKAAGSSLLYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----RPKAKYVIWPRIDQKSCIKAI 168 (444)
T ss_pred CccccCccHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----CCCCCEEEEECcChHHHHHHH
Confidence 3322 2347788999999999999987544578899999 6888888887531 112346999999999999999
Q ss_pred HHcCCEEEEEec--C-CCccccHHHHHHHhhc---CceEEEEeCC-CCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210 243 NYFGMKVKHIRL--T-SSYTVDLAALQSAITG---NTVMLVGSMP-NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315 (435)
Q Consensus 243 ~~~g~~v~~vp~--~-~~~~~d~~~l~~~i~~---~~~~v~~~~p-~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~ 315 (435)
...|++++.+|+ + +++.+|+++++++|++ ++.++++..| ++++|..+|+++|+++|++||+|+|+|+||+.+.
T Consensus 169 ~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~ 248 (444)
T TIGR03531 169 STAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQS 248 (444)
T ss_pred HHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcC
Confidence 999999999995 3 6789999999999985 4455555555 4566788999999999999999999999998643
Q ss_pred hhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHH
Q psy10210 316 APFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIAT 395 (435)
Q Consensus 316 ~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~ 395 (435)
..+... ..-......+|++++|+||++..|.+.|+++++++++.+.. ...|.+.. .......
T Consensus 249 ~~~~~~-----~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i---~~~y~g~~----------~~s~~~~ 310 (444)
T TIGR03531 249 NKYMEL-----INKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEI---SKSYPGRA----------SASPSLD 310 (444)
T ss_pred hhhhhh-----hhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHH---HHhccCCC----------CChHHHH
Confidence 211100 00011111379999999999888888788778888876543 23343321 1122357
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 396 CWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 396 ~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
+|++++.+|.++|.+.+++..+.++.+.+.|.++
T Consensus 311 ~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 311 VLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999998888877776666554
No 27
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=3.5e-25 Score=221.02 Aligned_cols=263 Identities=22% Similarity=0.207 Sum_probs=190.4
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+++.+++.+.+.. .+.|+.... ..+...+...++++.+++++|.+++ ++++|+|+|+++.+++.++.....
T Consensus 12 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~~~~~~~----- 84 (379)
T TIGR03402 12 DPEVLEAMLPYFTE-YFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKSALAAQP----- 84 (379)
T ss_pred CHHHHHHHHHHHHh-cCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence 45677777776654 234444322 2245677788999999999999765 899999999999999998753111
Q ss_pred CCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
++++|+++..+|+++...+ +..|++++.+|+++++.+|+++++++++++++++++++++||||.+.|+++|.++|++
T Consensus 85 ~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~ 164 (379)
T TIGR03402 85 EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKE 164 (379)
T ss_pred CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHH
Confidence 1235999999999876544 3459999999998788899999999999999999999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
+|+++|+|++++.. ..++++...++|++++|+||+ ++|.|+|+++++++.. ..|.+.|+...
T Consensus 165 ~g~~vivD~~~~~g-----------~~~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~v~~~~~------~~p~~~g~~~~ 226 (379)
T TIGR03402 165 RGALFHTDAVQAVG-----------KIPIDLKEMNIDMLSLSGHKL-HGPKGVGALYIRKGTR------FRPLLRGGHQE 226 (379)
T ss_pred cCCEEEEECccccc-----------ccccCcccCCCCEEEEcHHHc-CCCCceEEEEECCCCC------CCCcccCCccC
Confidence 99999999998643 236788788999999999995 7999999988875431 23334433221
Q ss_pred CCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHh-cCCcccc
Q psy10210 381 SPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQN-LSDLWLY 432 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~-l~~l~~~ 432 (435)
...-.|+.+...+.+..++++.+- .+...++.+++.+.+.+.++. ++++..+
T Consensus 227 ~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 281 (379)
T TIGR03402 227 RGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLN 281 (379)
T ss_pred CCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe
Confidence 112245555555555555555442 233334555555566665553 5655544
No 28
>KOG0257|consensus
Probab=99.94 E-value=8.4e-26 Score=214.85 Aligned_cols=216 Identities=19% Similarity=0.128 Sum_probs=177.4
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+..+.|+. .+|+.+.+.+.+.+... ....|+...|.|+|++++++.+..+.+.+
T Consensus 36 LgqGfp~~-~~P~fv~ea~~~~~~~~------~~~qYt~~~G~p~L~~aL~k~~se~~~~~------------------- 89 (420)
T KOG0257|consen 36 LGQGFPDF-PPPKFVTEAAKNAAKEP------STNQYTRGYGLPQLRKALAKAYSEFYGGL------------------- 89 (420)
T ss_pred ccCCCCCC-CCcHHHHHHHHHHhccc------hhccccccCCchHHHHHHHHHHHHHhccc-------------------
Confidence 56677887 78899999999987752 34556677799999999999999865443
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-------
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT------- 255 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~------- 255 (435)
..++++|++|+|+.+++..++.+++++||+ |++.+|.|.+|.....+.|.+.+.||..
T Consensus 90 -------~~~~~eVlVT~GA~~ai~~~~~~l~~~GDe--------Vii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~ 154 (420)
T KOG0257|consen 90 -------LDPDDEVLVTAGANEAISSALLGLLNPGDE--------VIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVS 154 (420)
T ss_pred -------cCCcccEEEecCchHHHHHHHHHHcCCCCE--------EEEecCcchhhhhHHhhcCCcceeecccccccccc
Confidence 134458999999999999999999999998 9999999999999999999999999875
Q ss_pred -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF 331 (435)
Q Consensus 256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~ 331 (435)
.++.+|.++++.+++++|++|++++||||||.+ +.+++|+++|++||+++|+|++|..+++. |..+..+..
T Consensus 155 s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d-----~~~h~r~as 229 (420)
T KOG0257|consen 155 SSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYD-----GNKHIRIAS 229 (420)
T ss_pred CccccCChHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhC-----CCcceeeec
Confidence 468899999999999999999999999999999 78999999999999999999999887763 322334443
Q ss_pred CCCCc---cEEEecCCCCCCccCC--cEEEEEeCCcccccc
Q psy10210 332 SLPGV---TSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQ 367 (435)
Q Consensus 332 ~~~gv---d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~ 367 (435)
. +|. ++-+.|+.|+ ++-.| +||++. ++.+....
T Consensus 230 l-Pgm~ertitvgS~gKt-f~~TGWrlGW~ig-p~~L~~~~ 267 (420)
T KOG0257|consen 230 L-PGMYERTITVGSFGKT-FGVTGWRLGWAIG-PKHLYSAL 267 (420)
T ss_pred C-CchhheEEEeccccce-eeeeeeeeeeeec-hHHhhhhH
Confidence 3 554 6667789998 45544 699666 66665443
No 29
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=9.1e-25 Score=223.48 Aligned_cols=305 Identities=20% Similarity=0.212 Sum_probs=211.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccc--cccCChHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHH
Q psy10210 106 ELPSQGRNRLEILELVSNYLARGHYDWKHGRVSG--AVYYYQQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIK 182 (435)
Q Consensus 106 ~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~ 182 (435)
.+|+ .++.++++.+.+...++..... ...+. ....-.|.+.+.+.+.-.. ...+|++++ .+++..+++.++++
T Consensus 45 ~~~~--~se~~~~~~~~~l~~~n~~~~~-~~~g~G~~~~~~~p~i~~~~~~~~~~-~~~tpYq~e~~sqG~lel~~~~~~ 120 (481)
T PRK04366 45 ELPE--VSELEVVRHYTRLSQKNYGVDT-GFYPLGSCTMKYNPKINEKVARLPGF-AELHPLQPEETVQGALELMYELQE 120 (481)
T ss_pred CCCC--CCHHHHHHHHHHHHhcCCCCCc-ceecCcccCCCCCHHHHHHHHhCcch-hcCCCCCChhhhhHHHHHHHHHHH
Confidence 5676 8999999999998877543221 22222 2222367777877765222 244688887 78999999999999
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD 261 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d 261 (435)
++++++|.+. ..+..++|+.+...++..++.... .+|. ++++|+++++.|+++...++..|++++.+|+++++.+|
T Consensus 121 ~la~l~G~~~--~~l~~~~GA~a~~~~l~~~r~~~~-~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D 197 (481)
T PRK04366 121 WLKEITGMDA--VTLQPAAGAHGELTGLLMIRAYHE-ARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVD 197 (481)
T ss_pred HHHHHhCCCc--eEEEeCcHHHHHHHHHHHHHHHhh-ccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcC
Confidence 9999999863 233434454444443332221111 1221 35679999999999999999999999999998789999
Q ss_pred HHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 262 LAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 262 ~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
+++++++++++|++|++++|| |+|.+ +++++|+++|+++|+++++|+++....+ | ..+....|+|+++
T Consensus 198 ~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~------g----~~~~~~~GaD~~~ 266 (481)
T PRK04366 198 LEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL------G----KARPGDMGFDVVH 266 (481)
T ss_pred HHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhc------c----cCCccccCCCEEE
Confidence 999999999999999999998 89988 6899999999999999999999853322 1 2344566899999
Q ss_pred ecCCCCCCccCC-----cEEEEEeCCccccccccccCCCCCCCCC-----C----CccccCCCchHHHHHHHHHHHhcHH
Q psy10210 341 VDTHKYGFTPKG-----SSVVLYRDLKYKHCQYFVTSDWPGGNYG-----S----PSVSGSRSGGIIATCWAAMMYFGFE 406 (435)
Q Consensus 341 ~s~hK~~~~p~g-----~g~il~~~~~~~~~~~~~~~~~~gg~~~-----~----~~~~gsr~~~~ia~~~a~l~~~g~~ 406 (435)
+++|||+++|.| +|++.++++ +.+........+.+..|. . ..-+++..+..+.++|..+..+|.+
T Consensus 267 ~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~ 345 (481)
T PRK04366 267 LNLHKTFSTPHGGGGPGSGPVGVKEE-LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAE 345 (481)
T ss_pred EechhhcCCCCCCCCCCeeeeeehhh-hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHH
Confidence 999999876654 467666654 322210000001111000 0 0011122234556899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 407 AQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
|+++..+++.+.+.++.++|.++
T Consensus 346 Gl~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 346 GLREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhh
Confidence 99998888777777766666543
No 30
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.94 E-value=2.8e-25 Score=223.41 Aligned_cols=241 Identities=20% Similarity=0.216 Sum_probs=178.1
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcC
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFG 246 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g 246 (435)
....+...++++.+++++|+.+.+++++|+|+|+++.+++.++....-. ++++|++++++|++ +...++..|
T Consensus 59 ~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~----~gd~vl~~~~~~~s~~~~~~~~~~~~g 134 (401)
T PRK10874 59 QRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQ----PGDEIIVSEAEHHANLVPWLMVAQQTG 134 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCC----CcCEEEECCcchHHHHHHHHHHHHHhC
Confidence 3456677789999999999954458999999999999999987421000 12459999999976 556678889
Q ss_pred CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
++++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+..
T Consensus 135 ~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~---------- 204 (401)
T PRK10874 135 AKVVKLPLGADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF---------- 204 (401)
T ss_pred CEEEEEecCCCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccc----------
Confidence 9999999988888999999999999999999999999999999999999999999999999999864322
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC----------CC-----CCccccCCCch
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN----------YG-----SPSVSGSRSGG 391 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~----------~~-----~~~~~gsr~~~ 391 (435)
+++....++|++++|+||+ ++|.|+|+++.+ +++.+.. ..|.+|. +. ..-..|+.+..
T Consensus 205 -~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~ 277 (401)
T PRK10874 205 -PADVQALDIDFYAFSGHKL-YGPTGIGVLYGK-SELLEAM----SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVA 277 (401)
T ss_pred -cCCchhcCCCEEEEecccc-cCCCccEEEEEc-hHHHhcC----CCeecCCcceEeeccCccCCCCChhhccCCCcCHH
Confidence 4555566799999999996 789999996655 4544331 2232221 00 01123556655
Q ss_pred HHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210 392 IIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 392 ~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
.++++.+++..+ |.+...+++++..+.+.+.+++++++..+
T Consensus 278 ~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~ 321 (401)
T PRK10874 278 GVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSF 321 (401)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 566666666554 44445566666666666666666666544
No 31
>KOG0629|consensus
Probab=99.94 E-value=4.8e-26 Score=215.38 Aligned_cols=316 Identities=21% Similarity=0.190 Sum_probs=245.2
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhC----CCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210 102 EYFLELPSQGRNRLEILELVSNYLAR----GHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME 177 (435)
Q Consensus 102 ~~~~~~P~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 177 (435)
.+..++|+.+.+-++|++..++.+.- ++.+|.+...++. +......+++....++|.+.+++.|.+.-||
T Consensus 70 l~nlel~~~~esl~qil~~cr~tl~y~vKTgHprffNQl~~gl------D~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE 143 (510)
T KOG0629|consen 70 LFNLELRDQPESLAQILEDCRDTLKYSVKTGHPRFFNQLSSGL------DPIGLAGEWLTSTANTNMFTYEIAPVFVLME 143 (510)
T ss_pred HhCcccCCChhhHHHHHHHHHHHHHhhhccCCCcchhhhccCC------CHHHHHHHHHHhccCCCCceEEecceEEeeh
Confidence 44568899889999999999887653 2333333222222 3445666777778888999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh---hhcCC---CCCeEEEeCCCchhHHHHHHHcC---CE
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR---EEKGI---SLPEIVLPTTAHPAFDKAANYFG---MK 248 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~---~~~g~---~~~~viv~~~~~~~~~~~~~~~g---~~ 248 (435)
.++...+.++.|.+...++++++||+-++..++.+.+...- +.+|. +.-.+.+++.+|+++.+++..+| -.
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 99999999999998876899999999999999999875432 23443 33344567779999999999998 58
Q ss_pred EEEEecCCCccccHHHHHHHhhc---C---ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210 249 VKHIRLTSSYTVDLAALQSAITG---N---TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA 322 (435)
Q Consensus 249 v~~vp~~~~~~~d~~~l~~~i~~---~---~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~ 322 (435)
++.|++++.|++++++||+.|.+ + +.+|..+.+++-.|..||++.|+++|++|++|+|||+|+||+++....+.
T Consensus 224 c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R 303 (510)
T KOG0629|consen 224 CIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHR 303 (510)
T ss_pred eEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhH
Confidence 99999999999999999998853 3 68899999999999999999999999999999999999999776432221
Q ss_pred CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc------ccccCCCCC---CCCCCCccccCCCchHH
Q psy10210 323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ------YFVTSDWPG---GNYGSPSVSGSRSGGII 393 (435)
Q Consensus 323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~------~~~~~~~~g---g~~~~~~~~gsr~~~~i 393 (435)
. .+.. ...++|++.++||++++|..||+++++.+.++.+. |.++.+-.- -..+...+++.|....
T Consensus 304 ~----kl~G-iera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~- 377 (510)
T KOG0629|consen 304 H----KLTG-IERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDV- 377 (510)
T ss_pred h----hccC-ccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccH-
Confidence 1 1222 22369999999999999999999999998865542 222222111 1124466777777765
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 394 ATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 394 a~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
...|..|+.-|..||++++.++.+.++++.+++.+-
T Consensus 378 FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer 413 (510)
T KOG0629|consen 378 FKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLRER 413 (510)
T ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 489999999999999999999999988888776543
No 32
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=3.7e-25 Score=220.30 Aligned_cols=266 Identities=18% Similarity=0.156 Sum_probs=188.5
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC--CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH---Hhhh
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH--PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD---YARE 219 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~---~~~~ 219 (435)
.+.+.+++.+.+..+ +.+|.. ....+...+...++++.+++++|.++.+++++|+|+|+++.+++.++.. +++
T Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~- 89 (373)
T cd06453 12 PQPVIDAIVDYYRHY-NANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGD- 89 (373)
T ss_pred CHHHHHHHHHHHHhc-CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCC-
Confidence 345566666555443 233322 1223556777888999999999987445899999999999999999875 444
Q ss_pred hcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210 220 EKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA 295 (435)
Q Consensus 220 ~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~ 295 (435)
+|++++++|++. ...++..|++++.+|++.++.+|++++++++++++++|++++++||||.+.++++|.
T Consensus 90 -------~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~ 162 (373)
T cd06453 90 -------EIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIG 162 (373)
T ss_pred -------EEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHH
Confidence 499999999984 445667899999999988888999999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC-
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW- 374 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~- 374 (435)
++|++||+++|+|++++.+.. ++++...++|++++|+||++ ++.|+|+++.++ ++.+........|
T Consensus 163 ~~~~~~~~~li~D~a~~~~~~-----------~~~~~~~~~d~~~~s~~K~~-~~~g~g~~~~~~-~~~~~~~~~~~g~~ 229 (373)
T cd06453 163 EIAHEAGVPVLVDGAQSAGHM-----------PVDVQDLGCDFLAFSGHKML-GPTGIGVLYGKE-ELLEEMPPYGGGGE 229 (373)
T ss_pred HHHHHcCCEEEEEhhhhcCce-----------eeeccccCCCEEEecccccc-CCCCcEEEEEch-HHhhcCCCeecCCC
Confidence 999999999999999865433 44555668999999999995 558889866654 4433211111100
Q ss_pred -------CCCCCCCC---ccccCCCchHHHHHHHHHHHhcHHHHH---HHHHHHHHHHHHHHHhcCCcccc
Q psy10210 375 -------PGGNYGSP---SVSGSRSGGIIATCWAAMMYFGFEAQV---WICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 375 -------~gg~~~~~---~~~gsr~~~~ia~~~a~l~~~g~~g~~---~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
....+... ...++.+...+.+.+++++.++.+++. ++.++..+.+.+.+++++++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 300 (373)
T cd06453 230 MIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVY 300 (373)
T ss_pred ccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 00011100 112455556666778888777655554 44455555555555556555543
No 33
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=7.1e-25 Score=219.03 Aligned_cols=237 Identities=21% Similarity=0.172 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHcCCEEEEEe
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIR 253 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp 253 (435)
..+.++.+++.+|+.+.+++++|+|+|+++.++++++...... ...+++|+++..+|+++... ++..|++++.+|
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~--~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~ 121 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEIL--KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLP 121 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcc--cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEe
Confidence 3344445555666633458999999999999999987321000 00123599999999887655 445799999999
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
+++++.+|+++++++++++++++++++++||||.+.|+++|.++|+++|+++|+|++++... .++++..
T Consensus 122 ~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~-----------~~~~~~~ 190 (382)
T TIGR03403 122 INEQGTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGK-----------IPVDVQK 190 (382)
T ss_pred cCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCC-----------CccCccc
Confidence 98888899999999999999999999999999999999999999999999999999986332 2567777
Q ss_pred CCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHH
Q psy10210 334 PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWI 411 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~ 411 (435)
.++|++++|+||| +||.|+|++++++... ..+.+.|+.+......|+.+...+.++..+++... .+...++
T Consensus 191 ~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~------~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~ 263 (382)
T TIGR03403 191 AGVDFLSFSAHKF-HGPKGVGGLYIRKGVE------LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSH 263 (382)
T ss_pred cCCCEEEEcchhh-CCCCceEEEEECCCCC------CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHH
Confidence 8999999999998 7899999988776431 23444443322222345555555555555655442 2333455
Q ss_pred HHHHHHHHHHHHHhcCCccccc
Q psy10210 412 CVRYHFNYKSCLQNLSDLWLYL 433 (435)
Q Consensus 412 ~~~~~~~~~~~~~~l~~l~~~~ 433 (435)
.++..+.+.+.+++++++..+.
T Consensus 264 ~~~l~~~l~~~L~~~~~~~~~~ 285 (382)
T TIGR03403 264 VRRLRDRLEDALLELPDVFVVG 285 (382)
T ss_pred HHHHHHHHHHHHhcCCCEEEEC
Confidence 5556666666666666666553
No 34
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.94 E-value=5.6e-25 Score=222.73 Aligned_cols=236 Identities=19% Similarity=0.219 Sum_probs=180.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH----HHhhhhcCCCCCeEEEeCCCchh----HHHHHHH
Q psy10210 173 VCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR----DYAREEKGISLPEIVLPTTAHPA----FDKAANY 244 (435)
Q Consensus 173 ~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~----~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~ 244 (435)
..+...++++.+++++|.++++++++|+|+|+++.+++.++. .++ ++|++++++|++ +...++.
T Consensus 74 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~g--------d~vl~~~~~~~s~~~~~~~~a~~ 145 (424)
T PLN02855 74 ATDAYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPG--------DEVILSVAEHHSNIVPWQLVAQK 145 (424)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCc--------CEEEECCCccHHHHHHHHHHHHH
Confidence 345567888999999999654589999999999999988642 233 459999998886 4556677
Q ss_pred cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
.|++++.+|++.++.+|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+..
T Consensus 146 ~g~~v~~v~~~~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g---------- 215 (424)
T PLN02855 146 TGAVLKFVGLTPDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVP---------- 215 (424)
T ss_pred cCCEEEEEecCCCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcC----------
Confidence 8999999999866779999999999999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC------------C---CCccccCCC
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY------------G---SPSVSGSRS 389 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~------------~---~~~~~gsr~ 389 (435)
..++++...++|++++|+||+ +||.|+|++++++ ++.+.. +.|.+|.. . ..-..|+++
T Consensus 216 -~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~-~~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~ 288 (424)
T PLN02855 216 -HMPVDVQTLGADFLVASSHKM-CGPTGIGFLWGKS-DLLESM----PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPA 288 (424)
T ss_pred -CcCCCchhcCCCEEEeecccc-cCCCccEEEEEch-hhhhcC----CCEecCCCceeeeecCccccCCChhhccCCChH
Confidence 236677777899999999996 7899999977664 443321 22322211 0 001246677
Q ss_pred chHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210 390 GGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYL 433 (435)
Q Consensus 390 ~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~ 433 (435)
...++++.++++.+ |.+...++++++.+.+.+.+++++++..+.
T Consensus 289 ~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~ 335 (424)
T PLN02855 289 IGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYG 335 (424)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 77777777777754 666666677777777777777777776664
No 35
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=7.3e-25 Score=220.50 Aligned_cols=271 Identities=21% Similarity=0.206 Sum_probs=191.8
Q ss_pred HhHHHHHHHHHHhhcCCCCCCC--CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 146 QDLVDLLTEVFGLTSYTNPLHP--DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 146 ~~l~~~i~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
+.+.+++.+.+... +.++... ...+...+...++++.+++++|.++.+++++|+|+|+++.+++.++......
T Consensus 32 ~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~---- 106 (403)
T TIGR01979 32 QQVIDAVAEYYRNS-NANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLK---- 106 (403)
T ss_pred HHHHHHHHHHHHhC-CCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCC----
Confidence 44555555544432 2222211 1123345667788999999999984458999999999999999886321100
Q ss_pred CCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++++|++++++|++. ...++..|++++.+|+++++.+|+++++++++++|+++++++++||||.+.|+++|.++|+
T Consensus 107 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~ 186 (403)
T TIGR01979 107 AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAH 186 (403)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHH
Confidence 134599999998873 4566778999999999888889999999999999999999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP---- 375 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~---- 375 (435)
+||+++|+|++|+.+.. ++++...++|++++|+||+ +||.|+|++++++ ++.+........|.
T Consensus 187 ~~~~~~ivD~a~~~g~~-----------~~~~~~~~~d~~~~s~~K~-~gp~G~g~l~~~~-~~~~~~~~~~~g~~~~~~ 253 (403)
T TIGR01979 187 QVGAKVLVDGAQAVPHM-----------PVDVQALDCDFYVFSGHKM-YGPTGIGVLYGKE-ELLEQMPPFLGGGEMIAE 253 (403)
T ss_pred HcCCEEEEEchhhcCcc-----------ccCccccCCCEEEEecccc-cCCCCceEEEEch-HHHhcCCCeecCCCceee
Confidence 99999999999864432 5666667899999999997 6899999976654 44332111100000
Q ss_pred ----CCCCC---CCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210 376 ----GGNYG---SPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYLP 434 (435)
Q Consensus 376 ----gg~~~---~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p 434 (435)
...|. ..-..|+.+...+++++++++.+ |.+.+.+++.++.+.+.+.++.++++..+.|
T Consensus 254 ~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~ 322 (403)
T TIGR01979 254 VSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGP 322 (403)
T ss_pred cccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 00010 00113566666666777776554 5566777777777777777777777766543
No 36
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.94 E-value=1.3e-24 Score=221.50 Aligned_cols=266 Identities=20% Similarity=0.250 Sum_probs=192.6
Q ss_pred hhchhhHHHHHHHHHHHH----HHHHhhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCC-CCCCccc-ccccC
Q psy10210 70 RKIPAVRKKLEEETGKVA----KLFQDDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYD-WKHGRVS-GAVYY 143 (435)
Q Consensus 70 ~~lp~~~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 143 (435)
.++|.....+.++++.+. +++.+.++... .......+|+. .+..++++++.+....+... +.....+ |....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~lp~~-~~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~ 80 (447)
T PRK00451 3 PYIPHTEEDIREMLDAIGVKSIDELFADIPEEL-RLKRPLDLPPG-LSEMELLRHLRELAAKNKTAEEYPSFLGAGAYDH 80 (447)
T ss_pred CCCCCCHHHHHHHHHHhCCCCHHHHHHhCCHHH-HhCCCCCCCCC-CCHHHHHHHHHHHHhcCCCcCcCcccCcccccCC
Confidence 578887777888887554 45554444322 22334578986 59999999999887543211 1111222 22222
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKG 222 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g 222 (435)
+.|.....+...-......++++++.+++.++.+.+.++++++++|.+.+ ++.+|+|||+++..++.++. .+++
T Consensus 81 ~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~-~v~~~~g~t~~~~~~~~a~~~~~g~---- 155 (447)
T PRK00451 81 YIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVA-NASMYDGATALAEAALMAVRITKRK---- 155 (447)
T ss_pred cCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcc-eEEecCcHHHHHHHHHHHHHhcCCC----
Confidence 34444444432222222346778888999999999999999999999876 89999999999988888774 3444
Q ss_pred CCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
+|+++++.|+++..+++. .|++++.+|++++ .+|+++++++++++|++|++++| |+||.++|+++|.++|
T Consensus 156 ----~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a 229 (447)
T PRK00451 156 ----KVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIA 229 (447)
T ss_pred ----EEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHH
Confidence 499999999998887665 6999999999877 89999999999999999999999 8899999999999999
Q ss_pred HHcCCcEEE--eccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCC
Q psy10210 299 EKYGIPVHV--DCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDL 361 (435)
Q Consensus 299 ~~~~~~liv--D~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~ 361 (435)
+++|+++++ |.+..+.. ......++|+++.++|||+ +++.|+|+++++++
T Consensus 230 ~~~~~~~iv~~d~~~~g~~-------------~~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~ 285 (447)
T PRK00451 230 HAGGALFIVGVDPVSLGLL-------------KPPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK 285 (447)
T ss_pred HHCCCEEEEEcChHHhccC-------------CCcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH
Confidence 999999998 54432111 1123568999999999972 33347888666553
No 37
>PRK14012 cysteine desulfurase; Provisional
Probab=99.93 E-value=4.6e-24 Score=214.66 Aligned_cols=235 Identities=21% Similarity=0.226 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH---cCCEEEE
Q psy10210 175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---FGMKVKH 251 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~---~g~~v~~ 251 (435)
+...++++.+++++|.+++ ++++|+|+|+++.+++.++...... ++++|++++++|+++...++. .|++++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~l~~l~~~~~~----~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~ 123 (404)
T PRK14012 49 EAVDIARNQIADLIGADPR-EIVFTSGATESDNLAIKGAAHFYQK----KGKHIITSKTEHKAVLDTCRQLEREGFEVTY 123 (404)
T ss_pred HHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHHHHHHHHhhcC----CCCEEEEecCccHHHHHHHHHHHhCCCEEEE
Confidence 4566788899999998765 7999999999999999887521100 134599999999987665544 5999999
Q ss_pred EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC
Q psy10210 252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF 331 (435)
Q Consensus 252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~ 331 (435)
+++++++.+|++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+.. +++.
T Consensus 124 v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----------~~~~ 192 (404)
T PRK14012 124 LDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----------PIDL 192 (404)
T ss_pred EccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----------ccCc
Confidence 99988888999999999999999999999999999999999999999999999999999864332 4566
Q ss_pred CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh--cHHHHH
Q psy10210 332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF--GFEAQV 409 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~--g~~g~~ 409 (435)
...++|++++|+||+ ++|.|+|+++++++...+ ..+.+.|+........|+.+...+.+.-+++... +.+...
T Consensus 193 ~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~~----~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~ 267 (404)
T PRK14012 193 SKLKVDLMSFSAHKI-YGPKGIGALYVRRKPRVR----LEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATEN 267 (404)
T ss_pred ccCCCCEEEEehhhc-cCCCceEEEEEecCCCCC----CCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHH
Confidence 666899999999996 688899998888765432 2333344321111112333333333333343322 334445
Q ss_pred HHHHHHHHHHHHHHHhcCCcc
Q psy10210 410 WICVRYHFNYKSCLQNLSDLW 430 (435)
Q Consensus 410 ~~~~~~~~~~~~~~~~l~~l~ 430 (435)
++.+++.+.+.+.++.++++.
T Consensus 268 ~~~~~l~~~l~~~L~~~~~i~ 288 (404)
T PRK14012 268 ERIRALRDRLWNGIKDIEEVY 288 (404)
T ss_pred HHHHHHHHHHHHHHhcCCCEE
Confidence 555666666666666655544
No 38
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=6.2e-24 Score=212.20 Aligned_cols=258 Identities=23% Similarity=0.232 Sum_probs=182.6
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+.+.+++.+.+... +.|+... .......++..++++.+++++|.+++ ++++|+|+|+++.+++.++......
T Consensus 13 ~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~~~~~~~~~---- 86 (381)
T PRK02948 13 SKEALQTYQKAASQY-FGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQSLLNALPQ---- 86 (381)
T ss_pred CHHHHHHHHHHHHhc-CCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHHHHHhccC----
Confidence 456666766666542 2333221 12244567788899999999998765 8999999999999999888643111
Q ss_pred CCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
++++|+++..+|+++... ++..|++++.+|+++++.+|++++++++++++++|++++++||||.+.|+++|.++|++
T Consensus 87 ~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~ 166 (381)
T PRK02948 87 NKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKK 166 (381)
T ss_pred CCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHH
Confidence 134599999899886554 45569999999998888899999999998899999999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
+|+++|+|++++.. ..+++....++|+++.++||+ +||.|+|+++++++.... +...++...
T Consensus 167 ~~~~vivD~~~~~g-----------~~~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~~~~------~~~~~~~~~ 228 (381)
T PRK02948 167 YNVLFHSDCVQTFG-----------KLPIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQVRWK------PVFPGTTHE 228 (381)
T ss_pred cCCEEEEEChhhcc-----------ccccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCCCCC------CcccCCCCC
Confidence 99999999886422 235667777899999999997 789999997766542111 111111111
Q ss_pred CCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHhc
Q psy10210 381 SPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.....++.+...++++.++++.+. .+...+++++..+.+.+.++++
T Consensus 229 ~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 276 (381)
T PRK02948 229 KGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL 276 (381)
T ss_pred CCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 112334555556666666766542 2334455555555555555544
No 39
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=6.5e-24 Score=211.25 Aligned_cols=270 Identities=18% Similarity=0.167 Sum_probs=197.9
Q ss_pred hHhHHHHHHHHHHhhcCCCC--CCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNP--LHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~--~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
++.+.+++.+.+..+. .|+ ...+......++..++++.+++++|+++++++++++|+|+++..++.++..+...
T Consensus 12 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~--- 87 (371)
T PF00266_consen 12 PKSVLEAISDYLRNFY-ANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP--- 87 (371)
T ss_dssp BHHHHHHHHHHHHHSG-SSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT---
T ss_pred CHHHHHHHHHHHHHhh-hcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc---
Confidence 5567777777766542 334 2233456678888999999999999998558999999999999999999543221
Q ss_pred CCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
+++|++.+..|++.. ..++..|++++.+|.+.++.+|++++++++++++++|++++.+|.+|...|+++|.++|
T Consensus 88 --g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~ 165 (371)
T PF00266_consen 88 --GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLA 165 (371)
T ss_dssp --TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHH
T ss_pred --ccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhh
Confidence 345999999999965 44556799999999988889999999999999999999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG- 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg- 377 (435)
+++|+++++|++++.+. .++|+...++|++++|+|| ++||.|+|+++++++... ........|...
T Consensus 166 ~~~~~~~~vD~~~~~g~-----------~~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~-~~~p~~~~~~~~~ 232 (371)
T PF00266_consen 166 HEYGALLVVDAAQSAGC-----------VPIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIE-RLRPAKPGGGYLD 232 (371)
T ss_dssp HHTTSEEEEE-TTTTTT-----------SS--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHH-HHHTSSSSSSTTT
T ss_pred hccCCceeEechhcccc-----------ccccccccccceeeecccc-cCCCCchhhheehhhhhh-ccccccccccccc
Confidence 99999999999986443 3788989999999999999 689999999888875332 211111222100
Q ss_pred ----------CCCCCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210 378 ----------NYGSPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLYL 433 (435)
Q Consensus 378 ----------~~~~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~~ 433 (435)
.....-..|+.+...+++...+++.+ |.+.+.++..++.+.+.+.+++++.+..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 233 FPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG 301 (371)
T ss_dssp HHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred cccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence 00000113566666666666666665 455555666666666777777777766644
No 40
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.93 E-value=7.6e-24 Score=212.70 Aligned_cols=267 Identities=18% Similarity=0.126 Sum_probs=182.2
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC-CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH-PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++.+.+++.+.+.... .++.. +.......++..++++.+++++|.+++ ++++++|+++++.+++.++.....
T Consensus 30 p~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-~v~~~~~~t~~l~~~~~~~~~~~~----- 102 (397)
T TIGR01976 30 PQSVADAVSAALTRSN-ANRGGAYESSRRADQVVDDAREAVADLLNADPP-EVVFGANATSLTFLLSRAISRRWG----- 102 (397)
T ss_pred CHHHHHHHHHHHHhcC-CCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEeCCHHHHHHHHHHHHHhcCC-----
Confidence 3455555555554321 11111 111234556678888999999998766 799999999999888877632111
Q ss_pred CCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCC-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTS-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
++++|++++++|++.. ..++..|++++.+|+++ ++.+|++++++++++++++|++++|+||||.+.|+++|.++|
T Consensus 103 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~ 182 (397)
T TIGR01976 103 PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELV 182 (397)
T ss_pred CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHH
Confidence 1235999999998743 55677899999999874 788999999999998999999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
++||+++++|++++.. ..++++...++|++++|+||| +||. +|+++.++ ++.+........|....
T Consensus 183 ~~~~~~~ivD~a~~~~-----------~~~~~~~~~~~d~~~~s~~K~-~g~~-~G~l~~~~-~~~~~l~~~~~~~~~~~ 248 (397)
T TIGR01976 183 HAAGALVVVDAVHYAP-----------HGLIDVQATGADFLTCSAYKF-FGPH-MGILWGRP-ELLMNLPPYKLTFSYDT 248 (397)
T ss_pred HHcCCEEEEehhhhcc-----------ccCCCHHHcCCCEEEEechhh-cCCc-eEEEEEcH-HHHhhCCCccccCccCC
Confidence 9999999999998432 125566667899999999999 4664 78866654 44333222223332221
Q ss_pred CCCCccccCCCchHHHHHHHHHHHhcHH-----------------HHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210 379 YGSPSVSGSRSGGIIATCWAAMMYFGFE-----------------AQVWICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~~-----------------g~~~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
....-..|+++...+++..++++.+... ...++..+..+.+.+.+++++++..+
T Consensus 249 ~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~ 319 (397)
T TIGR01976 249 GPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLY 319 (397)
T ss_pred CcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 1111235677777777777777665332 23344444455555555555555544
No 41
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.93 E-value=2.8e-23 Score=220.70 Aligned_cols=300 Identities=16% Similarity=0.149 Sum_probs=226.4
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCcccccccCC-hHhHHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCC
Q psy10210 113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYY-QQDLVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNG 190 (435)
Q Consensus 113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~ 190 (435)
++.++++.+.+..+++..- ..+..+.+.+.. .+...+.+......+....|++|+ ..++..+++.++.+|+++++|.
T Consensus 467 sE~e~~r~~~~L~~kn~~~-~~~fi~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm 545 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLAL-NNSMIPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF 545 (939)
T ss_pred CHHHHHHHHHHHHhcCCCc-cccCCCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence 7889999999887765321 124445445543 667777775555666667899998 7899999999999999999999
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i 269 (435)
+. ..+..++|+.+...++.++|.+.+. +|. .+.+|++|...|.+....++..|++++.||++++|.+|+++|++++
T Consensus 546 d~--~Sl~p~aGA~gE~agL~aiR~y~~~-rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i 622 (939)
T TIGR00461 546 DA--ISLQPNSGAQGEYAGLRVIRSYHES-RGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKA 622 (939)
T ss_pred CC--cccCCchHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHH
Confidence 84 4577788888888888888776544 443 4677999999998888889999999999999989999999999999
Q ss_pred hc---CceEEEEeCCCCCcccccC-HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC
Q psy10210 270 TG---NTVMLVGSMPNFPYGTMDD-IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK 345 (435)
Q Consensus 270 ~~---~~~~v~~~~p~nptG~~~~-i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK 345 (435)
++ ++++|++++|+| +|.+++ +++|.++|+++|.++++|.++..... ...+....|+|++.+|.||
T Consensus 623 ~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~----------~l~~Pg~~GaDi~~~s~HK 691 (939)
T TIGR00461 623 EQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQV----------GLTSPGDLGADVCHLNLHK 691 (939)
T ss_pred hhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCC----------CCCCccccCCCEEEecCCc
Confidence 74 899999999999 899966 99999999999999999999854211 1223356789999999999
Q ss_pred CCC-----ccCCcEEEEEeCCcccccccc--c--cCCCCCCC--CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 346 YGF-----TPKGSSVVLYRDLKYKHCQYF--V--TSDWPGGN--YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 346 ~~~-----~p~g~g~il~~~~~~~~~~~~--~--~~~~~gg~--~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
+++ ||+|+|++.++++ +...... . ..+..+.. .+.-+-.+++.+..+..+|+.++.+|.+|+.+..+.
T Consensus 692 tf~~P~G~GGPg~G~i~vr~~-L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ 770 (939)
T TIGR00461 692 TFCIPHGGGGPGMGPIGVKSH-LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVV 770 (939)
T ss_pred cCCCCCCCCCCCeEEEEEhhh-chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 767 5566799888864 3222100 0 00111100 010111245555666789999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q psy10210 415 YHFNYKSCLQNLSD 428 (435)
Q Consensus 415 ~~~~~~~~~~~l~~ 428 (435)
...++.++.++|.+
T Consensus 771 ailnAnYl~~rL~~ 784 (939)
T TIGR00461 771 AILNANYMATRLKD 784 (939)
T ss_pred HHHHHHHHHHHhhc
Confidence 88888888777754
No 42
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.93 E-value=2.9e-24 Score=212.52 Aligned_cols=238 Identities=13% Similarity=0.078 Sum_probs=176.1
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHcC
Q psy10210 169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYFG 246 (435)
Q Consensus 169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~g 246 (435)
.++...++..++++.+++++|.+++..+++|+|||+++.+++.++..+++. |++++++|++ +...++..|
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~--------vl~~~~~~~~~~~~~~~~~~g 97 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDK--------VLVGVNGVFGDRWADMAERYG 97 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCE--------EEEecCCchhHHHHHHHHHhC
Confidence 355677888899999999999966556889999999999999998766665 9999988876 467788899
Q ss_pred CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
++++.+|+++++.+|++++++.+++ ++++|++++++||+|.+.++++|.++|+++|+++++|++++.+.
T Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~---------- 167 (356)
T cd06451 98 ADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGG---------- 167 (356)
T ss_pred CCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccC----------
Confidence 9999999987788999999999987 89999999999999999999999999999999999999975321
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc--ccCCCCCC-----CC-C-CCccccCCCchHHHHH
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF--VTSDWPGG-----NY-G-SPSVSGSRSGGIIATC 396 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~--~~~~~~gg-----~~-~-~~~~~gsr~~~~ia~~ 396 (435)
.+++....++|+++.++||++++|.|+|+++.+++ +.+.... ....|... .+ + .....++.+...++++
T Consensus 168 -~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~ 245 (356)
T cd06451 168 -EPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYAL 245 (356)
T ss_pred -ccccccccCccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHH
Confidence 24455556789999999999888999999777654 4332211 01111100 00 0 0122334444445666
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 397 WAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 397 ~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.++++.+..+++.+..++..+..+.+.+.|
T Consensus 246 ~aal~~l~~~~~~~~~~~~~~~~~~l~~~L 275 (356)
T cd06451 246 REALDLILEEGLENRWARHRRLAKALREGL 275 (356)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 777777766666555555555544444444
No 43
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.92 E-value=1.1e-23 Score=211.35 Aligned_cols=243 Identities=16% Similarity=0.074 Sum_probs=179.3
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcC
Q psy10210 169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFG 246 (435)
Q Consensus 169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g 246 (435)
..+.+.++..++++.+++++|.+++..++++++||+++..++.++.+++++ |+++++.|++. ...++..|
T Consensus 36 ~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~--------Vlv~~~~~~~~~~~~~~~~~g 107 (401)
T PLN02409 36 RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDK--------VVSFRIGQFSLLWIDQMQRLN 107 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCE--------EEEeCCCchhHHHHHHHHHcC
Confidence 367788889999999999999976667899999999999999887777766 99999999774 57788889
Q ss_pred CEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHH--HHHcCCcEEEeccccchhhhccc
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKL--GEKYGIPVHVDCCLGGFLAPFMS 320 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~l--a~~~~~~livD~~~~~~~~~~~~ 320 (435)
++++.++.+.++.+|++++++++++ ++++|++++++||||.+.|+++|.++ |+++|+++++|++++.+
T Consensus 108 ~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g------ 181 (401)
T PLN02409 108 FDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIG------ 181 (401)
T ss_pred CceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccC------
Confidence 9999999886556899999999985 78999999999999999999999999 99999999999998532
Q ss_pred ccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc-----ccCCCCCC--CCCCC-ccccCCCchH
Q psy10210 321 AAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF-----VTSDWPGG--NYGSP-SVSGSRSGGI 392 (435)
Q Consensus 321 ~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~-----~~~~~~gg--~~~~~-~~~gsr~~~~ 392 (435)
..++++...++|+++.++|||+++|.|+|+++++++.+ +.... ...+|... .+... ...++.+...
T Consensus 182 -----~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~ 255 (401)
T PLN02409 182 -----ALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKAL-EASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQL 255 (401)
T ss_pred -----CccccccccCccEEEEcCccccCcCCCcceeEECHHHH-HHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHH
Confidence 23778878899999999999988999999977665432 22110 11111000 00000 0122444444
Q ss_pred HHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210 393 IATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 393 ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
+.++.++++.+ |.+...++.+++.+.+.+.++.+ +++.+
T Consensus 256 ~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~ 297 (401)
T PLN02409 256 LYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC 297 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 55666666655 44555555555555566555554 44443
No 44
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.91 E-value=1.2e-22 Score=203.20 Aligned_cols=168 Identities=20% Similarity=0.200 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
....++++.+++++|.+ .+++|+|+++++.+++.++..+++. |+++.++|.+...+++..|++++.+|+
T Consensus 63 ~~~~~l~~~lA~~~g~~---~~~~~~g~t~a~~~al~~l~~~gd~--------Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 131 (387)
T PRK09331 63 PPIADFHEDLAEFLGMD---EARVTHGAREGKFAVMHSLCKKGDY--------VVLDGLAHYTSYVAAERAGLNVREVPK 131 (387)
T ss_pred hHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHhcCCCCE--------EEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 34667778888889874 4688999999999999999777666 999999999998889999999999998
Q ss_pred --CCCccccHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 255 --TSSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 255 --~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
++++.+|++++++++++ ++++|++++|+|++|.+.++++|.++|++||+++|+|++|+.+..
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~--------- 202 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM--------- 202 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc---------
Confidence 66788999999999863 689999999999999999999999999999999999999975433
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~ 365 (435)
+++....|+|+++.|+||++.+|.|+|++++++ ++.+
T Consensus 203 --~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~ 239 (387)
T PRK09331 203 --PVDGKKLGADFIVGSGHKSMAASAPSGVLATTE-EYAD 239 (387)
T ss_pred --CCCHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHHh
Confidence 556666789999999999988888999866654 4433
No 45
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.91 E-value=7.9e-23 Score=202.71 Aligned_cols=167 Identities=17% Similarity=0.159 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
...++++.+++++|. +++++|+|+++++.+++.++..+++. |+++.++|.+...+++..|++++.+|++
T Consensus 45 ~~~~l~~~la~~~g~---~~i~~~~g~t~al~~~l~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (361)
T cd06452 45 PIKDFHHDLAEFLGM---DEARVTPGAREGKFAVMHSLCEKGDW--------VVVDGLAHYTSYVAAERAGLNVREVPNT 113 (361)
T ss_pred hHHHHHHHHHHHcCC---ceEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCcchHHHHHHHhcCCEEEEEecC
Confidence 345666788888887 37899999999999999998777766 9999999999888899999999999997
Q ss_pred CC--ccccHHHHHHHhh-------cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 256 SS--YTVDLAALQSAIT-------GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 256 ~~--~~~d~~~l~~~i~-------~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
.+ +.+|+++++++++ +++++|++++|+||+|.+.++++|.++|+++|+++|+|++|+.+..
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~---------- 183 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM---------- 183 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc----------
Confidence 54 4899999999886 3789999999999999999999999999999999999999974322
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~ 365 (435)
+++....++|+++.|+||++++|.++|+++.+ +++.+
T Consensus 184 -~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~-~~~~~ 220 (361)
T cd06452 184 -PVSGKELGADFIVGSGHKSMAASAPIGVLATT-EEWAD 220 (361)
T ss_pred -CCCHHHcCCCEEEecCCccccCCCCeEEEEEC-HHHHH
Confidence 34444557899999999997777888986665 44443
No 46
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=2.7e-22 Score=215.85 Aligned_cols=292 Identities=14% Similarity=0.095 Sum_probs=216.2
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCccccc--ccCChHhHHHHHHHHHHhhcCCCCCCCCc-ChhHHHHHHHHHHHHHHHh
Q psy10210 112 RNRLEILELVSNYLARGHYDWKHGRVSGA--VYYYQQDLVDLLTEVFGLTSYTNPLHPDI-FPGVCKMEAEVIKMCARMF 188 (435)
Q Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~l~ 188 (435)
.++.++++.+.+..+++-.- ..+...-+ ...-+|........+ ..+...+|+.|.. .++..++..++++++++++
T Consensus 504 ~se~~~~r~~~~l~~~~~~~-~~~~~plgsctmk~n~~~~~~~~~~-~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~ 581 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSL-VHSMIPLGSCTMKLNATTEMMPVTW-PEFANIHPFAPVDQAQGYQEMFEDLGDLLCEIT 581 (993)
T ss_pred cCHHHHHHHHHHHhhccccc-ccCCccCcccccccCchhhhhhhcC-cchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788999888877664221 12222211 111256555555443 4455667887755 4899999999999999999
Q ss_pred CCCCCCceEEcCChH----HHHHHHHHHHHHH-hhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHH
Q psy10210 189 NGGPETCGCMTSGGT----ESIMMACKAYRDY-AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLA 263 (435)
Q Consensus 189 g~~~~~~~~~t~ggt----eai~~a~~a~~~~-~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~ 263 (435)
|. +.+.++++++ +++.++++++.+. |+. .+.+|+++..+|.+....+...|++++.+|++++|.+|++
T Consensus 582 g~---~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~----~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~G~vDle 654 (993)
T PLN02414 582 GF---DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDH----HRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAKGNINIE 654 (993)
T ss_pred CC---CeEEEcCCCcHHHHHHHHHHHHHHHhccCCC----CCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCCCCcCHH
Confidence 99 3799999998 9999999999654 432 3557999999999999999999999999999989999999
Q ss_pred HHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 264 ALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 264 ~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
+|++++++ ++++|++++|+|-+|..+++++|.++|+++|+.+++|+++..... ...+....|+|++.
T Consensus 655 ~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~----------~l~~p~~~GaD~~~ 724 (993)
T PLN02414 655 ELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV----------GLTSPGFIGADVCH 724 (993)
T ss_pred HHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc----------CcCCccccCCCEEE
Confidence 99999984 789999999999999999999999999999999999999854321 13344567899999
Q ss_pred ecCCCCCCccC-----CcEEEEEeCCccccccccccCCCCCCCCC------CCccccCCCc------hHHHHHHHHHHHh
Q psy10210 341 VDTHKYGFTPK-----GSSVVLYRDLKYKHCQYFVTSDWPGGNYG------SPSVSGSRSG------GIIATCWAAMMYF 403 (435)
Q Consensus 341 ~s~hK~~~~p~-----g~g~il~~~~~~~~~~~~~~~~~~gg~~~------~~~~~gsr~~------~~ia~~~a~l~~~ 403 (435)
++.||++++|. |+|++.+++ .+... .|.|.-+..+ ...-.|+++. ..+..+|+.++.+
T Consensus 725 ~s~HK~f~~P~G~GGPg~G~l~~~~-~L~p~----lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~l 799 (993)
T PLN02414 725 LNLHKTFCIPHGGGGPGMGPIGVKK-HLAPF----LPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMM 799 (993)
T ss_pred ecCCccCCcCcccCCCCeeeEEEch-hhccc----CCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHH
Confidence 99999766554 589976665 44332 3444311100 1111355443 4455788889999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 404 GFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 404 g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
|.+|+++..+....++.++.++|.
T Consensus 800 G~~Gl~~~a~~a~~nAnYl~~rL~ 823 (993)
T PLN02414 800 GSEGLTDASKIAILNANYMAKRLE 823 (993)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998877777777666666653
No 47
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.2e-22 Score=203.68 Aligned_cols=215 Identities=22% Similarity=0.200 Sum_probs=163.0
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|..++ ++.+.+.+.+..... ..+|.+..|.+++++++++++......+
T Consensus 36 i~l~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~----------------- 90 (391)
T PRK08361 36 ISLGIGEPDFDT-PKNIKEAAKRALDEG-------WTHYTPNAGIPELREAIAEYYKKFYGVD----------------- 90 (391)
T ss_pred EEcCCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence 445556666544 567777777765532 2345566789999999999887542211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|.++...+...|++++.+|+++ ++
T Consensus 91 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~g~~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 152 (391)
T PRK08361 91 ---------VDV-DNVIVTAGAYEATYLAFESLLEEGDE--------VIIPDPAFVCYVEDAKIAEAKPIRIPLREENEF 152 (391)
T ss_pred ---------CCc-ccEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCCcccHHHHHHcCCEEEEEecCCccCC
Confidence 133 38999999999999999998877766 99999999999999999999999999974 46
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|++++++.++++++++++++|+||||.+-+ +++|.++|+++++++|+|++|+.+... +....+.......
T Consensus 153 ~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~ 227 (391)
T PRK08361 153 QPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYE-----GAKHYPMIKYAPD 227 (391)
T ss_pred CCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeC-----CCCCCCHhhcCCC
Confidence 79999999999989999999999999999965 899999999999999999999887642 1111111111223
Q ss_pred ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
.++++.|++|. ++..| +|+++.. +++.+
T Consensus 228 ~~i~~~s~SK~-~~~~GlRiG~~~~~-~~~~~ 257 (391)
T PRK08361 228 NTILANSFSKT-FAMTGWRLGFVIAP-EQVIK 257 (391)
T ss_pred CEEEEecCchh-cCCcHhhhhhhccC-HHHHH
Confidence 57888999998 45445 8996664 44443
No 48
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=8.1e-22 Score=213.10 Aligned_cols=296 Identities=16% Similarity=0.133 Sum_probs=209.8
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCcccccccC-ChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHhCC
Q psy10210 113 NRLEILELVSNYLARGHYDWKHGRVSGAVYY-YQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMFNG 190 (435)
Q Consensus 113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~g~ 190 (435)
++.++++.+.+..+++......-..-|+.+. -+|.....+..+ ..+....|++| +.+++..+++.++.+|+++++|.
T Consensus 479 sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p~~~~~~~~~-~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG~ 557 (954)
T PRK05367 479 SETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNAAAEMIPITW-PEFANLHPFAPAEQAAGYRELIDQLEAWLAEITGY 557 (954)
T ss_pred CHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCHHHHHHHHhC-ccccccCCCChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 6789999999988775332211122233333 255555555543 33444578998 88999999999999999999998
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i 269 (435)
+. ..+..+||+.+...++.+++..... +|. ++++|++++..|.+....+...|++++.+|++.+|.+|+++|++++
T Consensus 558 d~--~sl~~~~ga~ge~agL~a~r~~~~~-~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~L~~~i 634 (954)
T PRK05367 558 DA--VSLQPNAGAQGEYAGLLAIRAYHES-RGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDDLRAKA 634 (954)
T ss_pred CC--EEECccHHHHHHHHHHHHHHHHhhc-cCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHHHHHHH
Confidence 63 2344557788887877777654332 343 3567999999999999999999999999999988999999999999
Q ss_pred hc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCC
Q psy10210 270 TG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHK 345 (435)
Q Consensus 270 ~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK 345 (435)
++ ++.+|++++|++- |.+ +|+++|+++|+++|+++|+|+++......+ ......|+|++++|+||
T Consensus 635 ~~~~~~la~V~it~pst~-G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l----------~~pg~~GADi~~~s~HK 703 (954)
T PRK05367 635 EEHADNLAAIMITYPSTH-GVFEETIREICEIVHEHGGQVYLDGANMNAQVGL----------ARPGDIGADVSHLNLHK 703 (954)
T ss_pred hccCCCeEEEEEEcCCCC-eeecCCHHHHHHHHHHcCCEEEEECcChhhccCC----------CChhhcCCCEEEecCcc
Confidence 65 4788999999985 665 899999999999999999999996544321 12235689999999999
Q ss_pred CCCccC-----CcEEEEEeCCccccccccccCCCCCCC-C---CCCccccCCC--chHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 346 YGFTPK-----GSSVVLYRDLKYKHCQYFVTSDWPGGN-Y---GSPSVSGSRS--GGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 346 ~~~~p~-----g~g~il~~~~~~~~~~~~~~~~~~gg~-~---~~~~~~gsr~--~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
|++.|. |+|.+.+++ .+... .+.+..+. . +...+..+.- +..+..+|+.++.+|.+|+++.++.
T Consensus 704 ~f~~P~G~GGPg~G~l~vr~-~l~p~----lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 704 TFCIPHGGGGPGVGPIGVKA-HLAPF----LPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred cCCCCcCCCCCceEEEeecc-ccccc----CCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 975554 466877774 33221 23332110 0 0111111111 1233458999999999999999997
Q ss_pred HHHHHHHHHHhcCC
Q psy10210 415 YHFNYKSCLQNLSD 428 (435)
Q Consensus 415 ~~~~~~~~~~~l~~ 428 (435)
...++.++.++|.+
T Consensus 779 ~~~~A~Yl~~~L~~ 792 (954)
T PRK05367 779 AILNANYIAKRLKD 792 (954)
T ss_pred HHHHHHHHHHHHHh
Confidence 77777776666643
No 49
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=2.1e-22 Score=201.29 Aligned_cols=218 Identities=15% Similarity=0.145 Sum_probs=162.3
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|..+. ++.+.+.+.+.+... ....|..+.|.+++++++++++.+.....
T Consensus 32 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~----------------- 87 (383)
T TIGR03540 32 ISLGIGDPDLPT-PKHIVEALCKAAENP------ENHRYPSYEGMLAYRQAVADWYKRRFGVE----------------- 87 (383)
T ss_pred EEeCCCCCCCCC-CHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHhhCCC-----------------
Confidence 455566676533 567788887766532 12346667789999999999987642221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C-Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S-SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~-~~ 258 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++ + ++
T Consensus 88 ---------~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~ 150 (383)
T TIGR03540 88 ---------LDPETEVLSLIGSKEGIAHIPLAFVNPGDI--------VLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGF 150 (383)
T ss_pred ---------CCCCCeEEECCCcHHHHHHHHHHhCCCCCE--------EEEeCCCCcchHHHHHhcCCEEEEEecCcccCC
Confidence 123336899999999999999999877776 9999999999999999999999999997 3 45
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~ 333 (435)
.+|++++++++.+++++|++++||||||.+ +.+++|+++|++||+++++|++|+.+.+. +...+++ .+. .
T Consensus 151 ~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~-----~~~~~~~~~~~~~ 225 (383)
T TIGR03540 151 LPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFD-----GYKAPSFLEVDGA 225 (383)
T ss_pred ccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccC-----CCCCcCcccCCCc
Confidence 679999999988899999999999999999 45899999999999999999999877541 1111111 111 1
Q ss_pred CCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~ 366 (435)
....+...|+.|.. +. ..+|+++ .++++.+.
T Consensus 226 ~~~~i~~~SfSK~~-g~~GlRiG~~i-~~~~l~~~ 258 (383)
T TIGR03540 226 KDVGIEFHSLSKTY-NMTGWRIGMAV-GNADLIAG 258 (383)
T ss_pred ccCEEEEEeccccc-CCccceeeEEe-CCHHHHHH
Confidence 12346667888984 44 4489964 55565543
No 50
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.90 E-value=9.3e-23 Score=202.37 Aligned_cols=195 Identities=13% Similarity=0.063 Sum_probs=153.5
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
|+-.+.+.+.+++.... . + ..+...+...++++.+++++|++++ +++++|+|||+++..++.++..+++.
T Consensus 10 gp~~~~~~v~~~~~~~~-~---~--~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~--- 80 (363)
T TIGR02326 10 GPLTTSRTVKEAMLFDW-C---T--WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGK--- 80 (363)
T ss_pred CCCCCCHHHHHHhCCCC-C---C--CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCe---
Confidence 44445555555544321 1 1 1245677788899999999999764 47999999999999999998655544
Q ss_pred CCCCeEEEe-CCCchh-HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLP-TTAHPA-FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~-~~~~~~-~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
+++. ...|.. +...++..|++++.+|+++++.+|++++++++++ +++++.+++++||||.+.|+++|.++|
T Consensus 81 -----vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~ 155 (363)
T TIGR02326 81 -----LLVVINGAYGARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLA 155 (363)
T ss_pred -----EEEEeCChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHH
Confidence 5554 445554 3577888999999999988888999999999875 457788999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY 363 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~ 363 (435)
++||+++++|++++.+ ..++++...++|+++.++|||+++|.|+|+++++++.+
T Consensus 156 ~~~g~~livD~~~~~g-----------~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~ 209 (363)
T TIGR02326 156 HRHGKVTIVDAMSSFG-----------GIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAEL 209 (363)
T ss_pred HHcCCEEEEEcccccc-----------CcccchhhcCccEEEecCccccccCCcceEEEECHHHH
Confidence 9999999999987532 23677777789999999999988999999988776543
No 51
>PLN00175 aminotransferase family protein; Provisional
Probab=99.90 E-value=2e-22 Score=203.06 Aligned_cols=218 Identities=17% Similarity=0.131 Sum_probs=167.1
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
.+.+..+.|+.+ +++.+.+.+.+.+..+ ...|....|.+++++++++++......+
T Consensus 56 ~i~l~~G~P~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~Lr~aia~~~~~~~g~~---------------- 111 (413)
T PLN00175 56 AINLGQGFPNFD-GPDFVKEAAIQAIRDG-------KNQYARGFGVPELNSAIAERFKKDTGLV---------------- 111 (413)
T ss_pred eEecCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCcCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence 466777888863 4567788887776542 2346677799999999999987643221
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY 258 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~ 258 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|.|+.+...++..|++++.+|++ +++
T Consensus 112 ----------~~~~~~I~vt~G~~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 173 (413)
T PLN00175 112 ----------VDPEKEVTVTSGCTEAIAATILGLINPGDE--------VILFAPFYDSYEATLSMAGAKIKTVTLRPPDF 173 (413)
T ss_pred ----------CCCCCCEEEeCCHHHHHHHHHHHhCCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEECCcccC
Confidence 133336999999999999999998887776 9999999999999999999999999997 467
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LP 334 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~ 334 (435)
.+|++++++++.+++++|++++|+||||.+ +++++|.++|++|++++|+|++|..+.+. +. .. ....+. ..
T Consensus 174 ~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~--~~-~~--s~~~~~~~~ 248 (413)
T PLN00175 174 AVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFE--GD-HI--SMASLPGMY 248 (413)
T ss_pred CCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccC--Cc-cc--ChhhCCCCc
Confidence 899999999998899999999999999999 57889999999999999999999887642 10 11 111111 12
Q ss_pred CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
+..+++.|+.|... ....+|+++. ++++..
T Consensus 249 ~~vi~i~SfSK~~~~~G~RiG~~v~-~~~l~~ 279 (413)
T PLN00175 249 ERTVTMNSLGKTFSLTGWKIGWAIA-PPHLTW 279 (413)
T ss_pred CcEEEEecchhhccCcchheeeeEe-CHHHHH
Confidence 34567778999853 3466899665 444443
No 52
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.90 E-value=5.3e-22 Score=199.38 Aligned_cols=237 Identities=20% Similarity=0.196 Sum_probs=160.6
Q ss_pred CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHH-HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210 168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKA-YRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG 246 (435)
Q Consensus 168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a-~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g 246 (435)
..+.+..++..++++++++++|.+.+ +++++++|+++...++.+ ...++ ++++|+++++.|+++..++...|
T Consensus 57 ~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~~~~~~~~~~~~------~gd~Vl~~~~~h~~~~~~~~~~~ 129 (398)
T cd00613 57 EISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAEAAGLAAIRAYH------KRNKVLVPDSAHPTNPAVARTRG 129 (398)
T ss_pred hhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHHHHHHHHHhccc------CCCEEEEcCccCcchHHHHHHhc
Confidence 33567778888899999999988654 566676555554544444 34431 13459999999999988888877
Q ss_pred ----CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC-HHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210 247 ----MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD-IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA 321 (435)
Q Consensus 247 ----~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~-i~~i~~la~~~~~~livD~~~~~~~~~~~~~ 321 (435)
++++.+|+++++.+|+++++++++++|++|++++|+ |+|.+.+ +++|.++|++||+++|+|++++.+..
T Consensus 130 ~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~----- 203 (398)
T cd00613 130 EPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTG----- 203 (398)
T ss_pred ccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccC-----
Confidence 999999987777899999999999999999999986 8999977 59999999999999999998864322
Q ss_pred cCCCCCCCCCCCCCccEEEecCCCCCCcc-----CCcEEEEEeCCccccccccccCCCCCCC------------------
Q psy10210 322 AGYPLPPFDFSLPGVTSISVDTHKYGFTP-----KGSSVVLYRDLKYKHCQYFVTSDWPGGN------------------ 378 (435)
Q Consensus 322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-----~g~g~il~~~~~~~~~~~~~~~~~~gg~------------------ 378 (435)
+.+....++|+++.|+|||+ +| .++|+++.+ +++.+........|....
T Consensus 204 ------~~~~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 275 (398)
T cd00613 204 ------LKPPGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVK-KELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIR 275 (398)
T ss_pred ------CCChHHcCCCEEEeeccccC-CCCCCCCCceeEEEEh-hhhHhhCCCCeeccccccCCCcceEEecccchhhcc
Confidence 22333457999999999996 55 456775554 444432111111111100
Q ss_pred --CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 379 --YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 379 --~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.++.++ .+.+....+.++++++.++.+++.+..++..+....+.++|
T Consensus 276 ~e~~~~~~-~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L 324 (398)
T cd00613 276 REKATSNI-CTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRL 324 (398)
T ss_pred cccccccc-eecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 011111 12233344567778888888887755554444444443333
No 53
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.90 E-value=2.1e-22 Score=208.51 Aligned_cols=212 Identities=16% Similarity=0.132 Sum_probs=160.9
Q ss_pred CCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210 100 GLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME 177 (435)
Q Consensus 100 ~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 177 (435)
.+.+..+.|. ...+|+++++.+.+.+.. ..+|....|.+++|+++++++...... .
T Consensus 148 ~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--------~~~Y~~~~G~~~lReaia~~~~~~~~~-~------------- 205 (517)
T PRK13355 148 ILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--------TEGYSDSKGLFSARKAIMQYAQLKGLP-N------------- 205 (517)
T ss_pred eEEecCcCCCcCCCCCCHHHHHHHHHHhhc--------CCCCCCCcChHHHHHHHHHHHHhcCCC-C-------------
Confidence 3555666664 224577888888776542 124667779999999999998664211 1
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-- 255 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-- 255 (435)
.++ ++|++|+|+++++.+++.++.+++|. |++++|+|+.+...++..|++++.++++
T Consensus 206 ------------~~~-~~I~it~G~~eal~~~~~~l~~~Gd~--------Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~ 264 (517)
T PRK13355 206 ------------VDV-DDIYTGNGVSELINLSMSALLDDGDE--------VLIPSPDYPLWTACVNLAGGTAVHYRCDEQ 264 (517)
T ss_pred ------------CCh-hHEEEeCcHHHHHHHHHHHhCCCCCE--------EEEcCCCCcCHHHHHHHCCCEEEEeecCcc
Confidence 123 38999999999999999999888877 9999999999999999999999999987
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
.++.+|++++++++++++++|++++||||||.+ +.+++|+++|++||++||+||+|..+.+. +..+.++...
T Consensus 265 ~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~-----~~~~~s~~~~ 339 (517)
T PRK13355 265 SEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMD-----GLEHTSIASL 339 (517)
T ss_pred cCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCC-----CCCcccHHHh
Confidence 357899999999999999999999999999999 45899999999999999999999987642 1111111111
Q ss_pred CCCccEE-EecCCCC-CCccCCcEEEEEe
Q psy10210 333 LPGVTSI-SVDTHKY-GFTPKGSSVVLYR 359 (435)
Q Consensus 333 ~~gvd~~-~~s~hK~-~~~p~g~g~il~~ 359 (435)
.+.+.++ ..|++|. +.+...+|+++..
T Consensus 340 ~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 340 APDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred CCCCeEEEEecchhhccCcccceEEEEee
Confidence 1233233 3578897 3455668997764
No 54
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.7e-22 Score=200.00 Aligned_cols=220 Identities=19% Similarity=0.196 Sum_probs=165.9
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|....++..+.+.+.+.+... +..+|....|.+++++++++++.......
T Consensus 42 i~l~~g~~~~~~p~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~LR~aia~~l~~~~g~~----------------- 98 (405)
T PRK06207 42 VDFSHGDVDAHEPTPGAFELFSAGVERG------GVQAYTEYRGDADIRELLAARLAAFTGAP----------------- 98 (405)
T ss_pred eecCCcCCCCCCCCHHHHHHHHHHHhcC------CCccCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 4566667764345567788887766532 23456667789999999999887653221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-----
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT----- 255 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~----- 255 (435)
.++++++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++
T Consensus 99 ---------~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~--------Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~ 161 (405)
T PRK06207 99 ---------VDAADELIITPGTQGALFLAVAATVARGDK--------VAIVQPDYFANRKLVEFFEGEMVPVQLDYLSAD 161 (405)
T ss_pred ---------CCCCCCEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEEeccccCcc
Confidence 123248999999999999999999888877 9999999999999999999999999985
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF 331 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~ 331 (435)
.++.+|+++++++++++++++++++||||||.+ +++++|+++|++||+++++|++|+.+.+. +...+++ .+
T Consensus 162 ~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~-----~~~~~~~~~~ 236 (405)
T PRK06207 162 KRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYD-----GTSYTHLRAL 236 (405)
T ss_pred cCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----CCCCCchhcC
Confidence 257899999999998889999999999999999 46889999999999999999999987642 1111111 11
Q ss_pred C-CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 332 S-LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 332 ~-~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
. ...-.+++.|++|... +...+|+++ .++++.+.
T Consensus 237 ~~~~~~vi~i~SfSK~~~lpGlRiG~ii-~~~~l~~~ 272 (405)
T PRK06207 237 PIDPENVITIMGPSKTESLSGYRLGVAF-GSPAIIDR 272 (405)
T ss_pred CCCcCcEEEEecchhhccCcccceEEEE-cCHHHHHH
Confidence 1 1223467778999843 335589965 45555443
No 55
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.90 E-value=3.8e-22 Score=199.58 Aligned_cols=218 Identities=15% Similarity=0.180 Sum_probs=161.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|.. .+++.+.+.+.+.+... ....|....|.+++++++++++......+
T Consensus 34 i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~----------------- 89 (385)
T PRK09276 34 ISLGIGDPDL-PTPDHIIEAMCKAVEDP------ENHQYPSYEGMLEFRKAVADWYKRRFGVE----------------- 89 (385)
T ss_pred EEecCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence 4455566665 34567788887766532 12345566788999999999987642221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++++++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++. ++
T Consensus 90 ---------~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~ 152 (385)
T PRK09276 90 ---------LDPETEVISLIGSKEGIAHIPLAFVNPGDV--------VLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGF 152 (385)
T ss_pred ---------CCCCCcEEEccCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcChHHHHHHcCCEEEEEecCCCCCC
Confidence 123335889999999999999999887776 99999999999999999999999999863 46
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~ 333 (435)
.+|++++++.+.+++++|++++||||||.+ +++++|+++|++||+++++|++|..+.+. +...+++ .+. .
T Consensus 153 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~ 227 (385)
T PRK09276 153 LPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYD-----GYKPPSFLEVPGA 227 (385)
T ss_pred cCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecC-----CCCCCChhccCCC
Confidence 689999999888899999999999999999 45799999999999999999999887541 1111111 111 1
Q ss_pred CCccEEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGFTP--KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p--~g~g~il~~~~~~~~~ 366 (435)
.+..+...|+.|. ++. ..+|+++ .++++.+.
T Consensus 228 ~~~~i~~~S~SK~-~g~~GlRiG~~i-~~~~l~~~ 260 (385)
T PRK09276 228 KDVGIEFHSLSKT-YNMTGWRIGFAV-GNADLIAG 260 (385)
T ss_pred cCCEEEEecchhh-cCCcchhheeee-CCHHHHHH
Confidence 2345667788898 444 4489965 55555443
No 56
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.9e-22 Score=200.02 Aligned_cols=219 Identities=15% Similarity=0.165 Sum_probs=162.3
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|.. .+|.++++.+.+.+... ....|....|.+++++++++++...... .
T Consensus 38 i~l~~g~p~~-~~p~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~~~-~---------------- 93 (394)
T PRK05942 38 IDLGMGNPDG-AAPQPVIEAAIAALADP------QNHGYPPFEGTASFRQAITDWYHRRYGV-E---------------- 93 (394)
T ss_pred EEcCCCCCCC-CCCHHHHHHHHHHHhCC------CCccCCCCCCCHHHHHHHHHHHHHHHCC-C----------------
Confidence 4555666776 35666777776655421 1345667778999999999998764221 1
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|+|+.+...+...|++++.+|++. ++
T Consensus 94 ---------~~~~~~i~vt~G~~~al~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 156 (394)
T PRK05942 94 ---------LDPDSEALPLLGSKEGLTHLALAYVNPGDV--------VLVPSPAYPAHFRGPLIAGAQIYPIILKPENDW 156 (394)
T ss_pred ---------cCCCCeEEEccChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCEEEEeecCCccCC
Confidence 123335889999999999999999887776 99999999999998999999999999973 46
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~-~ 333 (435)
.+|++++++.++++++++++++||||||.+ +.+++|.++|++||+++|+|++|+.+... +....+ .++. .
T Consensus 157 ~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-----~~~~~~~~~~~~~ 231 (394)
T PRK05942 157 LIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFD-----GYQPTSLLEIPGA 231 (394)
T ss_pred ccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccC-----CCCCCChhhCCCc
Confidence 799999999998899999999999999999 45899999999999999999999887641 111111 1111 1
Q ss_pred CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
.+..+.+.|+.|.. .++.++|+++. ++++.+.
T Consensus 232 ~~~~i~~~SfSK~~~~~GlRiG~i~~-~~~l~~~ 264 (394)
T PRK05942 232 KDIGVEFHTLSKTYNMAGWRVGFVVG-NRHIIQG 264 (394)
T ss_pred cccEEEEecchhccCChhhheeeeec-CHHHHHH
Confidence 23445567788963 34466899654 5555443
No 57
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.90 E-value=9.6e-22 Score=197.95 Aligned_cols=231 Identities=16% Similarity=0.128 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEE-
Q psy10210 175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKV- 249 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v- 249 (435)
.+..+.++ + +++|++++ ++++|+|+|+++.+++.++..+++ ++.+|++++.+|++.. ..++..|+++
T Consensus 71 ~~~~~~~~-~-~l~g~~~~-~v~~~~~~t~~l~~~~~~~~~~~~-----~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~ 142 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKED-EVVVMNTLTINLHLLLASFYKPTP-----KRYKILLEAKAFPSDHYAIESQLQLHGLTVE 142 (406)
T ss_pred hhhhhhcc-c-cccCCCCC-cEEEeCCchHHHHHHHHHhcCCcC-----CccEEEecCCCCChHHHHHHHHHHhcCCCcc
Confidence 33333333 4 78998765 899999999999999988743321 1235888889999833 3456678887
Q ss_pred ---EEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 250 ---KHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 250 ---~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
+.++.++++.+|++++++.+. ++|++|++++++|.+|.+.|+++|.++|+++|+++++|++++.+..
T Consensus 143 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~------- 215 (406)
T TIGR01814 143 ESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV------- 215 (406)
T ss_pred cceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-------
Confidence 566666667889999988874 6899999999999999999999999999999999999999975443
Q ss_pred CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC----------C---CCccccCCCc
Q psy10210 324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY----------G---SPSVSGSRSG 390 (435)
Q Consensus 324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~----------~---~~~~~gsr~~ 390 (435)
++++...|+|++++++|||+++|+| |.++++++..... ......|.+... . ..-..|+.+.
T Consensus 216 ----~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~-~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~ 289 (406)
T TIGR01814 216 ----PLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTE-RPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPI 289 (406)
T ss_pred ----ccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhc-CCCCCcccCCCCccccccccccCCCccceeeCCccH
Confidence 6788788999999999999877778 6656665543221 111223322110 0 0001355555
Q ss_pred hHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 391 GIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 391 ~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
..++++.++++.+ |.+...++.+.+.+++.+.++++
T Consensus 290 ~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 328 (406)
T TIGR01814 290 LSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKAR 328 (406)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 5655666666654 56666677777777777666554
No 58
>PLN02368 alanine transaminase
Probab=99.90 E-value=2.1e-21 Score=194.31 Aligned_cols=191 Identities=13% Similarity=0.078 Sum_probs=146.9
Q ss_pred cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-
Q psy10210 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR- 214 (435)
Q Consensus 136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~- 214 (435)
...|....|.+++|+++++++.+.... . .++ +++++|+|+++++.+++.++.
T Consensus 100 ~~~Y~~~~G~~~LR~aia~~~~~~~g~-~-------------------------~~~-~~I~it~Ga~~al~~~~~~l~~ 152 (407)
T PLN02368 100 LGAYSDSRGLPGVRKEVAEFIERRDGY-P-------------------------SDP-ELIFLTDGASKGVMQILNAVIR 152 (407)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCC-C-------------------------CCh-hhEEEcccHHHHHHHHHHHHcC
Confidence 445777778999999999988764221 1 123 389999999999999999987
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhhc------CceEEEEeCCCCCcc
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAITG------NTVMLVGSMPNFPYG 286 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG 286 (435)
++++. |++++|+|+.+...++..|++++.+|+++ ++.+|++++++++++ +++++++++||||||
T Consensus 153 ~pGd~--------Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG 224 (407)
T PLN02368 153 GEKDG--------VLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTG 224 (407)
T ss_pred CCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCC
Confidence 67776 99999999999999999999999999873 478999999999874 689999999999999
Q ss_pred cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC-CCCCC-----CC----CCCCccEEEecCCCCCC--ccC
Q psy10210 287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY-PLPPF-----DF----SLPGVTSISVDTHKYGF--TPK 351 (435)
Q Consensus 287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~-~~~~~-----d~----~~~gvd~~~~s~hK~~~--~p~ 351 (435)
.+ +.+++|+++|++||++||+||+|+.+.+. +. +..++ ++ ...+-.++..|++|..+ .+.
T Consensus 225 ~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~-----~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~Gl 299 (407)
T PLN02368 225 QCLSEANLREILKFCYQERLVLLGDEVYQQNIYQ-----DERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQ 299 (407)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEccccccccC-----CCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCcc
Confidence 99 77889999999999999999999988652 10 11110 01 01123455668999742 457
Q ss_pred CcEEEEE--eCCccccc
Q psy10210 352 GSSVVLY--RDLKYKHC 366 (435)
Q Consensus 352 g~g~il~--~~~~~~~~ 366 (435)
.+|+++. .++++.+.
T Consensus 300 RiGy~i~~~~~~~li~~ 316 (407)
T PLN02368 300 RGGYFEMTNIPPKTVEE 316 (407)
T ss_pred ceEEEEEeCCCHHHHHH
Confidence 7899775 35555443
No 59
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.89 E-value=2.2e-22 Score=189.83 Aligned_cols=265 Identities=17% Similarity=0.128 Sum_probs=194.9
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210 112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191 (435)
Q Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~ 191 (435)
..|++|++.+++.++. |-++|. .+.+++.+++.+++..+.... ..
T Consensus 38 ~~pp~i~~Al~~rvdh-------GvfGY~--~~~~~~~~ai~~w~~~r~~~~--------------------------i~ 82 (388)
T COG1168 38 PTPPEIIEALRERVDH-------GVFGYP--YGSDELYAAIAHWFKQRHQWE--------------------------IK 82 (388)
T ss_pred CCCHHHHHHHHHHHhc-------CCCCCC--CCCHHHHHHHHHHHHHhcCCC--------------------------CC
Confidence 5678999999998875 344444 457889999999988754332 13
Q ss_pred CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C--CccccHHHHHHH
Q psy10210 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S--SYTVDLAALQSA 268 (435)
Q Consensus 192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~--~~~~d~~~l~~~ 268 (435)
+ +.+++++|.--++.++++++.+++|. |++..|.|++|.++.+..|-++...|+- + .+.+|+++||++
T Consensus 83 ~-e~i~~~p~VVpgi~~~I~~~T~~gd~--------Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~ 153 (388)
T COG1168 83 P-EWIVFVPGVVPGISLAIRALTKPGDG--------VVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKA 153 (388)
T ss_pred c-ceEEEcCcchHhHHHHHHHhCcCCCe--------eEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHH
Confidence 3 47999999999999999999999998 9999999999999999999999999985 3 456799999998
Q ss_pred hhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC---ccEEEe
Q psy10210 269 ITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG---VTSISV 341 (435)
Q Consensus 269 i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g---vd~~~~ 341 (435)
+.+ +++++++|+||||+|.+ +++.+|.+||++||+.||+||.|+.+++. |..+.++.....+ ..+.+.
T Consensus 154 ~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~-----g~~h~~~a~ls~~~a~~~it~~ 228 (388)
T COG1168 154 FVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLG-----GHKHIPFASLSERFADNSITLT 228 (388)
T ss_pred HhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccccccc-----CCCccchhhcChhhhcceEEEe
Confidence 875 56999999999999999 89999999999999999999999999884 4333344322222 245555
Q ss_pred cCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc--HHHHHHHHHHHHHH
Q psy10210 342 DTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG--FEAQVWICVRYHFN 418 (435)
Q Consensus 342 s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g--~~g~~~~~~~~~~~ 418 (435)
+..|... +...++.+++.+++++.+.......-.. +..+...+.+.-++.+.=+ .+.+.+.++++.+.
T Consensus 229 saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~---------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~ 299 (388)
T COG1168 229 SASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGL---------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDY 299 (388)
T ss_pred eccccccchhhhheeEEecCHHHHHHHHHHHHHhcC---------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 6789743 4466888899999875442111111111 1122222223333333221 35677888888888
Q ss_pred HHHHHH-hcCCcccccC
Q psy10210 419 YKSCLQ-NLSDLWLYLP 434 (435)
Q Consensus 419 ~~~~~~-~l~~l~~~~p 434 (435)
++..++ .+|++....|
T Consensus 300 ~~~~l~~~~P~v~v~~p 316 (388)
T COG1168 300 VADFLNKHLPGVKVTEP 316 (388)
T ss_pred HHHHHHhhCCCcEEecC
Confidence 888887 4788877655
No 60
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.89 E-value=3.1e-22 Score=192.69 Aligned_cols=282 Identities=17% Similarity=0.136 Sum_probs=181.8
Q ss_pred HHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHH-HHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCc
Q psy10210 117 ILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTE-VFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195 (435)
Q Consensus 117 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~-~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~ 195 (435)
+++.+.++..++...|+-+...++... .+.+++.+.+ .+.. ..+..-.-|..-.-.....++++.+++++|.+. .
T Consensus 2 ~~~~l~~~~~~~~~~~h~pgh~~g~~~-~~~~~~~~~~~~~~~-d~~~~~~~d~l~~~~g~i~~~~~~~A~~~ga~~--~ 77 (294)
T cd00615 2 LFEALKEYAKRGIISFHVPGHKGGRGF-RKSFYEFYGENLFKA-DVTELTGLDDLLDPTGPIKEAQELAARAFGAKH--T 77 (294)
T ss_pred hHHHHHHHHhCCCccccCCCCCCCCCc-CHHHHHHhccchhhc-ccCCCCCCCCCCCCChHHHHHHHHHHHHhCCCC--E
Confidence 567778877776666654433322211 3334443321 1111 011100011111123456777788999998753 4
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C----ccccHHHHHHHh
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S----YTVDLAALQSAI 269 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~----~~~d~~~l~~~i 269 (435)
+++|+|+|+++..++.++..+++. |+++.++|.++..++...|++++.++.+. + +.+|++++++++
T Consensus 78 ~~~~~Gst~a~~~~l~al~~~gd~--------Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l 149 (294)
T cd00615 78 FFLVNGTSSSNKAVILAVCGPGDK--------ILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKAL 149 (294)
T ss_pred EEEcCcHHHHHHHHHHHcCCCCCE--------EEEeCCchHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHH
Confidence 566999999999999998877776 99999999999999999999999998752 2 368999999999
Q ss_pred hc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC
Q psy10210 270 TG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG 347 (435)
Q Consensus 270 ~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~ 347 (435)
++ +++++++++| |++|.+.|+++|.++|+++|+++++|++|+.+.. |. +..+.+....|+|+++.|+||++
T Consensus 150 ~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~-~~-----~~~~~~~~~~~~div~~S~hK~l 222 (294)
T cd00615 150 IEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFR-FH-----PILPSSAAMAGADIVVQSTHKTL 222 (294)
T ss_pred HhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhc-cC-----cccCcchhhcCCcEEEEchhccc
Confidence 64 6899999998 6799999999999999999999999999986432 11 11133444568999999999997
Q ss_pred CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.++.+.|++..+++............. ...+|.+...++++-++.+.+..+| .+..++..+.+.++.+++
T Consensus 223 ~g~~~~~~l~~~~~~~~~~~~~~~~~~--------~~ttsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l 292 (294)
T cd00615 223 PALTQGSMIHVKGDLVNPDRVNEALNL--------HQSTSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEI 292 (294)
T ss_pred chHhHHHHHHhCCCcCCHHHHHHHHHH--------HCCCCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHH
Confidence 677777776666552221111101000 0123445555556556665554333 334455555555554443
No 61
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.2e-21 Score=196.62 Aligned_cols=220 Identities=16% Similarity=0.121 Sum_probs=163.4
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|..+ +++++.+.+.+.+... ...|....|.+.+++.+++.+...... .
T Consensus 33 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~--------------- 88 (393)
T PRK05764 33 VISLGAGEPDFD-TPEHIKEAAIEALDDG-------KTKYTPAAGIPELREAIAAKLKRDNGL-D--------------- 88 (393)
T ss_pred EEEeCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCcCCCCChHHHHHHHHHHHHHHhCC-C---------------
Confidence 345666777764 3467888887776532 223556668899999999988664321 1
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~ 257 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|..+..+++..|++++.+|++ .+
T Consensus 89 ----------~~~-~~i~~~~g~~~a~~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 149 (393)
T PRK05764 89 ----------YDP-SQVIVTTGAKQALYNAFMALLDPGDE--------VIIPAPYWVSYPEMVKLAGGVPVFVPTGEENG 149 (393)
T ss_pred ----------CCH-HHEEEeCCcHHHHHHHHHHhcCCCCE--------EEecCCCCcchHHHHHHcCCEEEEEecCcccC
Confidence 123 38999999999999999998777666 9999999999999999999999999987 35
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+.+|+++++++++++++++++++|+||||.+ +++++|.++|++||+++++|++|+.+.+. +....+.........
T Consensus 150 ~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~~~~~~~~~~~~~~ 227 (393)
T PRK05764 150 FKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYD--GAEFTSIASLSPELR 227 (393)
T ss_pred CcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeC--CCCcccHHHcCCCCc
Confidence 6789999999998889999999999999998 57999999999999999999999877541 110000011111223
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
+.++...|++|.. +..| +|+++ .++++.+.
T Consensus 228 ~~~i~~~s~SK~~-~~~G~RiG~i~-~~~~~~~~ 259 (393)
T PRK05764 228 DRTITVNGFSKAY-AMTGWRLGYAA-GPKELIKA 259 (393)
T ss_pred CCEEEEecCcccc-cCccceeEEEe-cCHHHHHH
Confidence 4577788899984 4334 78855 55555443
No 62
>PLN02231 alanine transaminase
Probab=99.89 E-value=2.5e-21 Score=199.71 Aligned_cols=215 Identities=13% Similarity=0.121 Sum_probs=155.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhC
Q psy10210 110 QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFN 189 (435)
Q Consensus 110 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g 189 (435)
....|.++++++.+.+..... .....|+...|.+++|+++++++.+.... +
T Consensus 138 ~~~fp~~~i~~a~~~l~~~~~---~~~~~Y~~s~G~~~lReaIA~~~~~r~g~-~------------------------- 188 (534)
T PLN02231 138 HGLFSADAIERAWQILDQIPG---RATGAYSHSQGIKGLRDAIAAGIEARDGF-P------------------------- 188 (534)
T ss_pred cccCCHHHHHHHHHHHHhcCC---ccccCcCCCCCcHHHHHHHHHHHHhccCC-C-------------------------
Confidence 334555777777665543210 12344667778888888888887664221 1
Q ss_pred CCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHH
Q psy10210 190 GGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQ 266 (435)
Q Consensus 190 ~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~ 266 (435)
.++ ++|++|+|+++++.+++.+++. +++. |+++.|+|+.+...++..|++++.+|+++ ++.+|+++++
T Consensus 189 ~~p-e~I~iT~Ga~~ai~~~~~~l~~~~gd~--------Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le 259 (534)
T PLN02231 189 ADP-NDIFLTDGASPAVHMMMQLLIRSEKDG--------ILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELK 259 (534)
T ss_pred CCc-ccEEEeCCHHHHHHHHHHHhccCCCCE--------EEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHH
Confidence 233 3899999999999999999874 5666 99999999999999999999999999973 4789999999
Q ss_pred HHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC-----
Q psy10210 267 SAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF----- 331 (435)
Q Consensus 267 ~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~----- 331 (435)
+++++ +++++++++|+||||.+ +.+++|+++|++||++||+||+|..+.+.- +....++ .+
T Consensus 260 ~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~----~~~~~s~~~~~~~~g 335 (534)
T PLN02231 260 KQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVP----DKKFHSFKKVARSMG 335 (534)
T ss_pred HHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC----CCCcccHHHHHhhhc
Confidence 99865 68999999999999999 789999999999999999999999876520 1111111 00
Q ss_pred -CCCCccEEE-ecCCCCCC--ccCCcEEEEEe--CCccccc
Q psy10210 332 -SLPGVTSIS-VDTHKYGF--TPKGSSVVLYR--DLKYKHC 366 (435)
Q Consensus 332 -~~~gvd~~~-~s~hK~~~--~p~g~g~il~~--~~~~~~~ 366 (435)
....+..++ .|+.|..+ ++..+|++... ++++.+.
T Consensus 336 ~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~ 376 (534)
T PLN02231 336 YGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQ 376 (534)
T ss_pred cccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHH
Confidence 011223444 48899533 45778997663 4555543
No 63
>PRK08912 hypothetical protein; Provisional
Probab=99.89 E-value=1.1e-21 Score=196.30 Aligned_cols=218 Identities=17% Similarity=0.112 Sum_probs=165.0
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|+.+ .|.++++.+.+.+... ...|....|.+++++++++++......+
T Consensus 28 ~i~l~~g~p~~~-~p~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---------------- 83 (387)
T PRK08912 28 AINLGQGFPDDP-GPEDVRRAAADALLDG-------SNQYPPMMGLPELRQAVAAHYARFQGLD---------------- 83 (387)
T ss_pred eEEccCCCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence 355667778764 4567888777765431 3456677789999999999987643221
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY 258 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~ 258 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++ +++
T Consensus 84 ----------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 145 (387)
T PRK08912 84 ----------LDPETEVMVTSGATEALAAALLALVEPGDE--------VVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHW 145 (387)
T ss_pred ----------CCCcccEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecCcccC
Confidence 123237999999999999999998877766 9999999999999999999999999997 467
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~ 333 (435)
.+|++++++.++++++++++++|+||||.+ +++++|.++|++|++++|+|++|+.+.+. +....++ .+. .
T Consensus 146 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~ 220 (387)
T PRK08912 146 RLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFD-----GRRHIPLMTLPGM 220 (387)
T ss_pred cCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccC-----CCCCcChhhCCCc
Confidence 899999999998899999999999999998 46888999999999999999999877542 1111111 111 1
Q ss_pred CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.+.++++.|++|... ....+|+++.. +++.+
T Consensus 221 ~~~~i~~~S~SK~~g~~GlRiG~~~~~-~~~~~ 252 (387)
T PRK08912 221 RERTVKIGSAGKIFSLTGWKVGFVCAA-PPLLR 252 (387)
T ss_pred cCceEEEeechhhccCcCceeEEEecC-HHHHH
Confidence 245788889999842 22458996654 44443
No 64
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.89 E-value=2.2e-21 Score=195.38 Aligned_cols=217 Identities=18% Similarity=0.161 Sum_probs=167.1
Q ss_pred CCCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210 99 AGLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK 175 (435)
Q Consensus 99 ~~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
..+.+..+.|+. -.+|..+.+.+.+.+... ....|.+..|.+++++++++++...... .
T Consensus 33 ~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~-~----------- 94 (409)
T PLN00143 33 LAISFGFGDPSCFECFRTTNIAEDAIVEAVRSA------KFNSYAPTGGILPARRAIADYLSNDLPY-Q----------- 94 (409)
T ss_pred ceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc------CCCCCCCCCCCHHHHHHHHHHHHhhcCC-C-----------
Confidence 345666777871 256778888888776642 1234667779999999999998764321 1
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++
T Consensus 95 --------------~~~-~~I~it~G~~~al~~~~~~l~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~~~~~ 151 (409)
T PLN00143 95 --------------LSP-DDVYLTLGCKHAAEIIIKVLARPEAN--------ILLPRPGFPDVETYAIFHHLEIRHFDLL 151 (409)
T ss_pred --------------CCH-hhEEEecChHHHHHHHHHHHcCCCCE--------EEEcCCCCcCHHHHHHHcCCEEEEEecc
Confidence 133 38999999999999999999888776 9999999999999999999999999985
Q ss_pred --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-
Q psy10210 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF- 329 (435)
Q Consensus 256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~- 329 (435)
+++.+|++++++++.++++++++++||||||.+ +.+++|+++|++|++++++|++|..+.+. +....++
T Consensus 152 ~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-----~~~~~~~~ 226 (409)
T PLN00143 152 PEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFG-----SKPFVPMG 226 (409)
T ss_pred CCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccC-----CCCCcchh
Confidence 456799999999998889999999999999999 56889999999999999999999987652 1111121
Q ss_pred CCCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210 330 DFSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL 361 (435)
Q Consensus 330 d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~ 361 (435)
.+....-.+++.|+.|. +.+...+|+++..++
T Consensus 227 ~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p 259 (409)
T PLN00143 227 LFASIVPVITLGSISKRWMIPGWGLGWLVTCDP 259 (409)
T ss_pred hhcccCcEEEEccchhhcCCCccceEEEEeeCc
Confidence 11111224566789998 555678999877544
No 65
>PLN02187 rooty/superroot1
Probab=99.89 E-value=1.9e-21 Score=198.13 Aligned_cols=217 Identities=20% Similarity=0.188 Sum_probs=164.9
Q ss_pred CCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210 100 GLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM 176 (435)
Q Consensus 100 ~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
.+.+..+-|+. ..++.++.+.+.+.+..+. ...|.+..|.+++++++++++...... .
T Consensus 68 vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~------~~~Y~~~~G~~~lR~aiA~~~~~~~~~-~------------ 128 (462)
T PLN02187 68 ILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGK------GNSYGPGAGILPARRAVADYMNRDLPH-K------------ 128 (462)
T ss_pred eEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCC------CCCCCCCCChHHHHHHHHHHHHHhcCC-C------------
Confidence 34444555652 2456788888888776431 234667778999999999998764221 1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~- 255 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+.
T Consensus 129 -------------~~~-~~I~it~G~~~al~~~~~~l~~pGd~--------Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~ 186 (462)
T PLN02187 129 -------------LTP-EDIFLTAGCNQGIEIVFESLARPNAN--------ILLPRPGFPHYDARAAYSGLEVRKFDLLP 186 (462)
T ss_pred -------------CCc-ccEEEeCCHHHHHHHHHHHhcCCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEeCcc
Confidence 234 38999999999999999999888877 9999999999999999999999999984
Q ss_pred -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D 330 (435)
Q Consensus 256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d 330 (435)
+++.+|+++++++++++++++++++||||||.+ +.+++|+++|++||+++|+||+|+.+.+. +....++ .
T Consensus 187 ~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~-----~~~~~s~~~ 261 (462)
T PLN02187 187 EKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG-----DNPFVSMGK 261 (462)
T ss_pred ccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccC-----CCCceeHHH
Confidence 568899999999998899999999999999998 56899999999999999999999987652 1111111 1
Q ss_pred CCCCCccEEEecCCCC-CCccCCcEEEEEeCCc
Q psy10210 331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDLK 362 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~ 362 (435)
+....-.++..|+.|. +.+...+|+++..+++
T Consensus 262 ~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~ 294 (462)
T PLN02187 262 FASIVPVLTLAGISKGWVVPGWKIGWIALNDPE 294 (462)
T ss_pred hccCCcEEEEecchhhcCCccceeEEEEecCch
Confidence 1111124555688998 5555778997775543
No 66
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=195.87 Aligned_cols=217 Identities=21% Similarity=0.161 Sum_probs=163.3
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+. .+++.+.+.+.+.+... ...|....|.+++++++++++.+....+
T Consensus 27 i~l~~g~~~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~la~~~~~~~~~~----------------- 81 (382)
T PRK06108 27 LPLWFGESDL-PTPDFIRDAAAAALADG-------ETFYTHNLGIPELREALARYVSRLHGVA----------------- 81 (382)
T ss_pred EEecCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 4556666765 34567888888776542 2335566789999999999887643211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---C
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS---S 257 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~---~ 257 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++. +
T Consensus 82 ---------~~~-~~i~~t~g~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 143 (382)
T PRK06108 82 ---------TPP-ERIAVTSSGVQALMLAAQALVGPGDE--------VVAVTPLWPNLVAAPKILGARVVCVPLDFGGGG 143 (382)
T ss_pred ---------cCc-ceEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCccchHHHHHHCCCEEEEeeCCCCCCC
Confidence 133 38999999999999999998877766 99999999999999999999999999862 4
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSL 333 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~ 333 (435)
+.+|++++++.++++++++++++|+||||.+ +++++|.++|+++|+++|+|++|+++.+.. +...+ ..++..
T Consensus 144 ~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~----~~~~~~~~~~~~ 219 (382)
T PRK06108 144 WTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP----GGRAPSFLDIAE 219 (382)
T ss_pred ccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC----CCCCCCHhhcCC
Confidence 5799999999998889999999999999988 578999999999999999999999886520 11111 122222
Q ss_pred -CCccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210 334 -PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 334 -~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~ 365 (435)
....++..|++|.. .++.++|+++.+ +++.+
T Consensus 220 ~~~~~i~~~S~SK~~g~~G~RiG~~~~~-~~~~~ 252 (382)
T PRK06108 220 PDDRIIFVNSFSKNWAMTGWRLGWLVAP-PALGQ 252 (382)
T ss_pred CcCCEEEEeechhhccCcccceeeeeCC-HHHHH
Confidence 12457778999973 334568996654 44443
No 67
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.89 E-value=2.9e-22 Score=203.59 Aligned_cols=265 Identities=17% Similarity=0.143 Sum_probs=190.9
Q ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHHH
Q psy10210 38 TTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLEI 117 (435)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~i 117 (435)
....-|..|..+|+|+.+..+ -+........++.+....... ........|..+.|+....|.+.
T Consensus 44 Tv~~ay~~L~~~G~i~~~~gs-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~f~~g~p~~~~fp~~~ 108 (459)
T COG1167 44 TVSRAYEELEARGYIESRPGS-------------APPSGRPVRLELLKPSDPELL--EDDPSVIDFAGGLPDPSLFPLEA 108 (459)
T ss_pred HHHHHHHHHHhCcceeeccCC-------------Ccccccccccchhhhhhcccc--cCCCceecCCCCCCCcccCCHHH
Confidence 346688999999999988754 111111111111111111000 22233456777778777778777
Q ss_pred HHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceE
Q psy10210 118 LELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGC 197 (435)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~ 197 (435)
+++........... .....|....|.++|++++++.+....+.+ +.++ +|+
T Consensus 109 ~~~~~~~~~~~~~~--~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~--------------------------~~~~-~Ii 159 (459)
T COG1167 109 LRRALARVLRNYGA--SLALQYGPTAGLPELREAIAAYLLARRGIS--------------------------CEPE-QIV 159 (459)
T ss_pred HHHHHHHHHhhcch--hhhhcCCCCCCcHHHHHHHHHHHHHhcCCc--------------------------cCcC-eEE
Confidence 77666554432111 114556666899999999999988432221 2444 899
Q ss_pred EcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEE
Q psy10210 198 MTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVML 276 (435)
Q Consensus 198 ~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v 276 (435)
+|+|+++|+.++++.+.++||. |++++|+|+....+++..|++++.||+|++| +|++++++.+.. +++++
T Consensus 160 iT~G~q~al~l~~~~l~~pGd~--------v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G-~~~e~le~~~~~~~~k~~ 230 (459)
T COG1167 160 ITSGAQQALDLLLRLLLDPGDT--------VLVEDPTYPGALQALEALGARVIPVPVDEDG-IDPEALEEALAQWKPKAV 230 (459)
T ss_pred EeCCHHHHHHHHHHHhCCCCCE--------EEEcCCCcHHHHHHHHHcCCcEEecCCCCCC-CCHHHHHHHHhhcCCcEE
Confidence 9999999999999999999888 9999999999999999999999999999766 999999999875 56666
Q ss_pred EEe-CCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccC
Q psy10210 277 VGS-MPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPK 351 (435)
Q Consensus 277 ~~~-~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~ 351 (435)
+++ +.+||||.+ +..++|.++|++||++||+|+.|+.+.+. +.+.+++ .....+-.+...|++|.+....
T Consensus 231 y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~-----~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl 305 (459)
T COG1167 231 YVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYD-----GPPPPPLKALDAPGRVIYLGSFSKTLAPGL 305 (459)
T ss_pred EECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcC-----CCCCCChHhhCCCCCEEEEeeehhhccccc
Confidence 655 889999999 67789999999999999999999988652 2222222 3333466788889999976668
Q ss_pred CcEEEEEeC
Q psy10210 352 GSSVVLYRD 360 (435)
Q Consensus 352 g~g~il~~~ 360 (435)
++|+++...
T Consensus 306 RlG~vv~p~ 314 (459)
T COG1167 306 RLGYVVAPP 314 (459)
T ss_pred ceeeeeCCH
Confidence 999966554
No 68
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.89 E-value=1.9e-21 Score=194.67 Aligned_cols=220 Identities=11% Similarity=0.046 Sum_probs=163.1
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|.. .+++++.+.+.+.+... ....|....|.+++++++++++......+
T Consensus 33 i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~----------------- 88 (388)
T PRK07366 33 IDLSLGSSDL-PAPAHALEAIAQSLHDP------STHGYLLFHGTLDFREAAAQWYEQRFGLA----------------- 88 (388)
T ss_pred EEeCCCCCCC-CCCHHHHHHHHHHHhCc------ccCCCCCCCCCHHHHHHHHHHHHHhhCCc-----------------
Confidence 4455566665 33567777777765421 23456667789999999999987642211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.+++.++++|+|+++++.+++.+++++++. |++++|+|+.+...++..|++++.+|+++ ++
T Consensus 89 ---------~~~~~~I~it~Gs~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 151 (388)
T PRK07366 89 ---------VDPETEVLPLIGSQEGTAHLPLAVLNPGDF--------ALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDF 151 (388)
T ss_pred ---------CCCcCeEEECCCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEECCCccCC
Confidence 233326999999999999999999888877 99999999999999999999999999973 35
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLP 334 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~ 334 (435)
.+|++++++.+.++++++++++||||||.+ +.+++|+++|++||++||+||+|..+.+. +.. ..+. ......
T Consensus 152 ~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~--~~~--~~~~~~~~~~~ 227 (388)
T PRK07366 152 LPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFD--GEV--EPPSILQADPE 227 (388)
T ss_pred CCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccC--CCC--CCCChhhCCCC
Confidence 688999988887789999999999999999 67888999999999999999999988652 110 0111 111111
Q ss_pred -CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 335 -GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 335 -gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
...+++.|+.|.. .+...+|+++ .++++.+.
T Consensus 228 ~~~vi~~~SfSK~~g~~GlRiG~~v-~~~~li~~ 260 (388)
T PRK07366 228 KSVSIEFFTLSKSYNMGGFRIGFAI-GNAQLIQA 260 (388)
T ss_pred cccEEEEeecccccCCcchhheehc-CCHHHHHH
Confidence 1245667899984 3457789965 55555543
No 69
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-21 Score=196.51 Aligned_cols=218 Identities=13% Similarity=0.116 Sum_probs=160.8
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+. .+++.+.+.+.+.+... ...+|. ..|.+++++++++++.......
T Consensus 35 i~l~~g~p~~-~~~~~~~~~~~~~~~~~------~~~~y~-~~G~~~lr~aia~~~~~~~g~~----------------- 89 (399)
T PRK07681 35 IDLSIGNPDM-PPADFVREEMVHTANQK------ESYGYT-LSGIQEFHEAVTEYYNNTHNVI----------------- 89 (399)
T ss_pred EEeCCCCCCC-CCCHHHHHHHHHHHhcc------ccCCCC-CCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence 4555566765 34566777777765431 122232 3689999999999987643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++++++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++ ++
T Consensus 90 ---------~~~~~~I~it~G~~~al~~~~~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~ 152 (399)
T PRK07681 90 ---------LNADKEVLLLMGSQDGLVHLPMVYANPGDI--------ILVPDPGYTAYETGIQMAGATSYYMPLKKENDF 152 (399)
T ss_pred ---------CCCCCeEEECCCcHHHHHHHHHHhCCCCCE--------EEECCCCccchHHHHHhcCCEEEEEecCCCCCC
Confidence 233248999999999999999999887776 99999999999999999999999999973 35
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~-~ 333 (435)
.+|++++++++.+++++|++++||||||.+ +.+++|+++|++||+++|+|++|+.+.+. +....+ ..+. .
T Consensus 153 ~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~-----~~~~~~~~~~~~~ 227 (399)
T PRK07681 153 LPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFD-----GNKPISFLSVPGA 227 (399)
T ss_pred cCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeC-----CCCCCChhhCCCC
Confidence 789999999988889999999999999999 55889999999999999999999987642 111111 1111 1
Q ss_pred CCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
....++..|++|... ....+|+++ .++++.+.
T Consensus 228 ~~~~i~~~S~SK~~~~~GlRiG~~i-~~~~l~~~ 260 (399)
T PRK07681 228 KEVGVEINSLSKSYSLAGSRIGYMI-GNEEIVRA 260 (399)
T ss_pred cccEEEEeecccccCCccceeEEEe-cCHHHHHH
Confidence 123566678999842 335589965 45555543
No 70
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-21 Score=194.95 Aligned_cols=217 Identities=15% Similarity=0.131 Sum_probs=161.2
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
.++..+.|..+ ++.++++.+.+.... ....|....|.+++++++++++......
T Consensus 32 i~l~~g~p~~~-~~~~~~~~~~~~~~~-------~~~~Y~~~~G~~~lr~~ia~~~~~~~~~------------------ 85 (384)
T PRK06348 32 IDLSLGDPDLI-TDESIINAAFEDAKK-------GHTRYTDSGGDVELIEEIIKYYSKNYDL------------------ 85 (384)
T ss_pred EEcCCCCCCCC-CCHHHHHHHHHHHhc-------CCCCCCCCCCcHHHHHHHHHHHHHHhCC------------------
Confidence 45566667653 345666655544332 1345667778899999999998754221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~ 258 (435)
+.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++ +++
T Consensus 86 --------~~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 148 (384)
T PRK06348 86 --------SFKR-NEIMATVGACHGMYLALQSILDPGDE--------VIIHEPYFTPYKDQIEMVGGKPIILETYEEDGF 148 (384)
T ss_pred --------CCCh-hhEEEcCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcchHHHHHHcCCEEEEecCCcCcCC
Confidence 1233 38999999999999999999877776 9999999999999999999999999874 456
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|++++++++++++++|++++||||||.+ +++++|.++|++||+++++|++|+++... .. ..+...++. ..+
T Consensus 149 ~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~-~~~~~~~~~-~~~ 224 (384)
T PRK06348 149 QINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFY--ED-FVPMATLAG-MPE 224 (384)
T ss_pred cCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeC--CC-ccchhhcCC-CcC
Confidence 799999999998889999999999999999 57899999999999999999999988642 10 001011111 123
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
-.++..|+.|... +...+|+++.. +++.+
T Consensus 225 ~vi~~~SfSK~~~l~GlRiG~~v~~-~~~~~ 254 (384)
T PRK06348 225 RTITFGSFSKDFAMTGWRIGYVIAP-DYIIE 254 (384)
T ss_pred cEEEEecchhccCCccccceeeecC-HHHHH
Confidence 3566778999843 45778996654 44433
No 71
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.89 E-value=4.1e-21 Score=192.30 Aligned_cols=219 Identities=18% Similarity=0.130 Sum_probs=161.3
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|.. .+++.+.+.+.+..... ....|....|.+++++++++.+..+....
T Consensus 30 ~~l~~g~~~~-~~~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~----------------- 85 (389)
T PRK05957 30 ISLGQGVVSY-PPPPEAIEALNNFLANP------ENHKYQAVQGIPPLLEAITQKLQQDNGIE----------------- 85 (389)
T ss_pred EEccCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 4455556664 45667788887766431 12345566788889888888776543221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV 260 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~ 260 (435)
.++.+++++|+|+++++..++.++.++++. |++++|.|..+...++..|++++.+|.++++.+
T Consensus 86 ---------~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 148 (389)
T PRK05957 86 ---------LNNEQAIVVTAGSNMAFMNAILAITDPGDE--------IILNTPYYFNHEMAITMAGCQPILVPTDDNYQL 148 (389)
T ss_pred ---------CCCCCeEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCc
Confidence 122348999999999999999988777766 999999999998888999999999999877889
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV 336 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv 336 (435)
|++++++++++++++|++++|+||||.+-+ +++|.++|++||+++++|++|+.+... +. .. ...... ....-
T Consensus 149 d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~--~~-~~-~~~~~~~~~~~~ 224 (389)
T PRK05957 149 QPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYD--GV-KH-FSPGSIPGSGNH 224 (389)
T ss_pred CHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCC--CC-Cc-cChhhCCCccCc
Confidence 999999999989999999999999999854 999999999999999999999987642 10 10 011111 11123
Q ss_pred cEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
.+.+.|+.|. ++..| +|+++.. +++.+.
T Consensus 225 ~i~~~S~SK~-~g~~GlRiG~~~~~-~~~~~~ 254 (389)
T PRK05957 225 TISLYSLSKA-YGFASWRIGYMVIP-IHLLEA 254 (389)
T ss_pred EEEEecchhh-ccCccceeEEEecC-HHHHHH
Confidence 4566778898 45444 8996654 454433
No 72
>PLN02656 tyrosine transaminase
Probab=99.89 E-value=3.6e-21 Score=193.84 Aligned_cols=216 Identities=20% Similarity=0.139 Sum_probs=166.4
Q ss_pred CCCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210 99 AGLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK 175 (435)
Q Consensus 99 ~~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
+.+.+..+.|+. ..+|+.+.+.+.+.+... ....|.+..|.+++++++++++...... .
T Consensus 32 ~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~-~----------- 93 (409)
T PLN02656 32 RVISLGMGDPTAYSCFHTTHVAQEAVVDALQSN------KFNGYAPTVGLPQARRAIAEYLSRDLPY-K----------- 93 (409)
T ss_pred eeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHHHhcCC-C-----------
Confidence 345666677761 256678888888776642 2345667779999999999998764221 1
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++
T Consensus 94 --------------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~i~~~ 150 (409)
T PLN02656 94 --------------LSL-DDVFITSGCTQAIDVALSMLARPGAN--------ILLPRPGFPIYELCAAFRHLEVRYVDLL 150 (409)
T ss_pred --------------CCc-ccEEEeCChHHHHHHHHHHHhCCCCe--------EEEeCCCCCcHHHHHHHcCCEEEEEeCC
Confidence 233 38999999999999999999877776 9999999999999999999999999985
Q ss_pred --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-
Q psy10210 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF- 329 (435)
Q Consensus 256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~- 329 (435)
+++.+|+++++++++++++++++++|+||||.+ +++++|+++|++||+++|+|++|+.+.+. +....++
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~ 225 (409)
T PLN02656 151 PEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFG-----SNPFVPMG 225 (409)
T ss_pred CcCCCCCCHHHHHHHhccCceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccC-----CCCcccHH
Confidence 356799999999998899999999999999999 68999999999999999999999987642 1111121
Q ss_pred CCCCCCccEEEecCCCC-CCccCCcEEEEEeC
Q psy10210 330 DFSLPGVTSISVDTHKY-GFTPKGSSVVLYRD 360 (435)
Q Consensus 330 d~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~ 360 (435)
.+....-.+...|+.|. +.+...+|+++..+
T Consensus 226 ~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~ 257 (409)
T PLN02656 226 VFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTD 257 (409)
T ss_pred HhcccCcEEEEcccchhccCcceeEEEEEEeC
Confidence 11111224566789997 55557899987754
No 73
>PRK08068 transaminase; Reviewed
Probab=99.89 E-value=2.5e-21 Score=193.94 Aligned_cols=219 Identities=12% Similarity=0.098 Sum_probs=161.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+. .+++.+.+.+.+.+... ....|.+..|.+++++++++++...... +
T Consensus 35 i~l~~~~p~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~~~~~~g~-~---------------- 90 (389)
T PRK08068 35 INLGQGNPDQ-PTPEHIVEALQEAAENP------ANHKYSPFRGYPFLKEAAADFYKREYGV-T---------------- 90 (389)
T ss_pred EEecCCCCCC-CCCHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHHHhCC-C----------------
Confidence 4555666765 33456777777765532 1234556778999999999998754221 1
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++ ++
T Consensus 91 ---------~~~~~~i~it~G~~~~l~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~ 153 (389)
T PRK08068 91 ---------LDPETEVAILFGGKAGLVELPQCLMNPGDT--------ILVPDPGYPDYLSGVALARAQFETMPLIAENNF 153 (389)
T ss_pred ---------CCCCccEEEcCCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEeecccccCC
Confidence 123337999999999999999998877776 99999999999999999999999999973 46
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCC-CC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDF-SL 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~-~~ 333 (435)
.+|++++++++.+++++|++++||||||.+ +.+++|.++|++|++++|+|++|+.+... +....+ ... ..
T Consensus 154 ~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~-----~~~~~s~~~~~~~ 228 (389)
T PRK08068 154 LPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFD-----GQKPVSFLQTPGA 228 (389)
T ss_pred CCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccC-----CCCCcChhhCCCc
Confidence 789999999998889999999999999999 56788999999999999999999876431 100001 111 11
Q ss_pred CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
....+++.|+.|.. .+...+|+++ .++++.+.
T Consensus 229 ~~~~i~~~S~SK~~g~~GlRiG~~~-~~~~l~~~ 261 (389)
T PRK08068 229 KDVGIELYTLSKTFNMAGWRVAFAV-GNESVIEA 261 (389)
T ss_pred cCCEEEEecchhccCCccceeEeEe-cCHHHHHH
Confidence 22346677899984 2445689965 55665543
No 74
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.88 E-value=3.6e-21 Score=194.13 Aligned_cols=223 Identities=15% Similarity=0.165 Sum_probs=166.4
Q ss_pred CCCCccccCCCCCC---CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHH
Q psy10210 98 NAGLEYFLELPSQG---RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVC 174 (435)
Q Consensus 98 ~~~~~~~~~~P~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (435)
...+.+..+.|+.. .+++.+.+.+.+.+... ....|....|.+++++++++++......++-..
T Consensus 33 ~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~------~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~------- 99 (412)
T PTZ00433 33 KSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQ------ECNGYPPTVGSPEAREAVATYWRNSFVHKESLK------- 99 (412)
T ss_pred CCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcC------CCCCCCCCCCcHHHHHHHHHHHHhhcccccccc-------
Confidence 34567777888742 46778888887766532 123466667899999999999876422100000
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
...++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+
T Consensus 100 -------------~~~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~ 157 (412)
T PTZ00433 100 -------------STIKK-DNVVLCSGVSHAILMALTALCDEGDN--------ILVPAPGFPHYETVCKAYGIEMRFYNC 157 (412)
T ss_pred -------------CCCCh-hhEEEeCChHHHHHHHHHHhcCCCCE--------EEEccCCcccHHHHHHHcCCEEEEEec
Confidence 00123 48999999999999999999877776 999999999999999999999999998
Q ss_pred C--CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-
Q psy10210 255 T--SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP- 328 (435)
Q Consensus 255 ~--~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~- 328 (435)
+ .++.+|++++++++++++++|++++||||||.+ +++++|+++|++||+++|+|++|..+.+. +...++
T Consensus 158 ~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~ 232 (412)
T PTZ00433 158 RPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFN-----GATFTSV 232 (412)
T ss_pred CccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccC-----CCCccch
Confidence 6 357899999999998899999999999999987 67899999999999999999999987642 111111
Q ss_pred CCCCCCCccEEEecCCCCC-CccCCcEEEEEeC
Q psy10210 329 FDFSLPGVTSISVDTHKYG-FTPKGSSVVLYRD 360 (435)
Q Consensus 329 ~d~~~~gvd~~~~s~hK~~-~~p~g~g~il~~~ 360 (435)
..+....-.+++.|+.|.. .+...+|+++..+
T Consensus 233 ~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~ 265 (412)
T PTZ00433 233 ADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVD 265 (412)
T ss_pred hhccCCCceEEEccchhhcCCCCeeEEEEEEeC
Confidence 1111111235667899974 4557889987643
No 75
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.88 E-value=3e-21 Score=191.92 Aligned_cols=172 Identities=17% Similarity=0.184 Sum_probs=144.2
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH--HHHHHHcCC
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF--DKAANYFGM 247 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~--~~~~~~~g~ 247 (435)
+...+...++++.+++++|.+++ ..+++|++||+++..++.++..+++. +++.++.+++. ...++..|+
T Consensus 33 ~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~--------vlv~~~~~~~~~~~~~~~~~g~ 104 (368)
T PRK13479 33 DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGK--------VLVPDNGAYGARIAQIAEYLGI 104 (368)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCe--------EEEEeCCchHHHHHHHHHHcCC
Confidence 33456788999999999998653 46889999999999999998766655 88887777664 477888999
Q ss_pred EEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 248 KVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 248 ~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
+++.+|+++++.+|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++- +
T Consensus 105 ~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-----------g 173 (368)
T PRK13479 105 AHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-----------G 173 (368)
T ss_pred cEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-----------C
Confidence 999999987778999999999864 457899999999999999999999999999999999977632 2
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~ 361 (435)
..++++...++|+++.++|||+++|.|+|+++++++
T Consensus 174 ~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~ 209 (368)
T PRK13479 174 AIPIDIAELGIDALISSANKCIEGVPGFGFVIARRS 209 (368)
T ss_pred CccccccccCceEEEecCccccccCCCceEEEECHH
Confidence 235677677899999999999889999999777654
No 76
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.88 E-value=5.7e-21 Score=192.12 Aligned_cols=220 Identities=14% Similarity=0.130 Sum_probs=163.0
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|..+. ++.+.+.+.+.+.... ...|. ..|.+++++++++++........
T Consensus 46 ~i~L~~g~p~~~~-~~~~~~~l~~~~~~~~------~~~Y~-~~G~~~lr~aia~~~~~~~g~~~--------------- 102 (410)
T PRK06290 46 LIDMGVGEPDEMA-DESVVEVLCEEAKKPE------NRGYA-DNGIQEFKEAAARYMEKVFGVKD--------------- 102 (410)
T ss_pred eEEcCCCCCCCCC-CHHHHHHHHHHHhCCC------CCCCC-CCCcHHHHHHHHHHHHHHcCCCc---------------
Confidence 4556667777644 4567777776554221 22233 36899999999999876432110
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~ 257 (435)
.+++.++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++ +
T Consensus 103 ----------~~~~~~I~it~Gs~~al~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~ 164 (410)
T PRK06290 103 ----------IDPVTEVIHSIGSKPALAMLPSCFINPGDV--------TLMTVPGYPVTGTHTKYYGGEVYNLPLLEENN 164 (410)
T ss_pred ----------CCCcceEEEccCHHHHHHHHHHHhCCCCCE--------EEEeCCCCccHHHHHHHcCCEEEEEecCCCcC
Confidence 123337999999999999999999888776 99999999999999999999999999973 4
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-C
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-L 333 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~ 333 (435)
+.+|++++++++.+++++|++++||||||.+ +.+++|.++|++||++|++|++|+.+.+. +......... .
T Consensus 165 ~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~-----~~~~s~~~~~~~ 239 (410)
T PRK06290 165 FLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFD-----GKPLSFLSVPGA 239 (410)
T ss_pred CcCCHHHHHHhhcccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeC-----CCCcChhcCCCc
Confidence 6789999999988889999999999999999 55889999999999999999999987541 1110111111 1
Q ss_pred CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
.+.+++..|+.|.. .+...+|+++ .++++...
T Consensus 240 ~~~~I~i~SfSK~~g~~GlRiG~ii-~~~~l~~~ 272 (410)
T PRK06290 240 KEVGVEIHSLSKAYNMTGWRLAFVV-GNELIVKA 272 (410)
T ss_pred cccEEEEeechhhcCCchhheEeEE-eCHHHHHH
Confidence 24568888999984 2445689955 45555443
No 77
>PRK08960 hypothetical protein; Provisional
Probab=99.88 E-value=4.8e-21 Score=191.74 Aligned_cols=214 Identities=14% Similarity=0.105 Sum_probs=160.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|.. .+|..+.+.+.+.+... ...|....|.+++++++++++.......
T Consensus 35 i~l~~g~~~~-~~~~~v~~a~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~----------------- 89 (387)
T PRK08960 35 IHLEIGEPDF-TTAEPIVAAGQAALAAG-------HTRYTAARGLPALREAIAGFYAQRYGVD----------------- 89 (387)
T ss_pred EEeCCCCCCC-CCCHHHHHHHHHHHhcC-------CCccCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 4455566664 34778888888877632 2345566789999999999887542211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|.+++.+|++. ++
T Consensus 90 ---------~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 151 (387)
T PRK08960 90 ---------VDP-ERILVTPGGSGALLLASSLLVDPGKH--------WLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRY 151 (387)
T ss_pred ---------CCh-hhEEEccCcHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHhcCCeEEEEecCcccCC
Confidence 233 38999999999999999999877776 99999999999999999999999999873 45
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|+++++++++++++++++++||||||.+ +.+++|+++|++||+++++|++|.++.+. +. ..+.... ..
T Consensus 152 ~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~--~~---~~~~~~~--~~ 224 (387)
T PRK08960 152 QLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYG--VD---AASVLEV--DD 224 (387)
T ss_pred CCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccC--CC---CCChhhc--cC
Confidence 799999999999899999999999999998 55778888999999999999999886541 10 0111111 12
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
-.++..|++|..+ +...+|+++.. +++.+
T Consensus 225 ~vi~~~S~SK~~g~~GlRiG~~~~~-~~~~~ 254 (387)
T PRK08960 225 DAFVLNSFSKYFGMTGWRLGWLVAP-PAAVP 254 (387)
T ss_pred CEEEEeecccccCCcccEEEEEEcC-HHHHH
Confidence 2456678999842 33458996654 44443
No 78
>PRK07337 aminotransferase; Validated
Probab=99.88 E-value=3.3e-21 Score=192.98 Aligned_cols=213 Identities=16% Similarity=0.133 Sum_probs=158.5
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+.+ .+..+.+.+.+.+... ...|....|.+++++++++++.......
T Consensus 33 i~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~----------------- 87 (388)
T PRK07337 33 IHMGIGEPDFT-APEPVVEAAARALRRG-------VTQYTSALGLAPLREAIAAWYARRFGLD----------------- 87 (388)
T ss_pred EEeCCcCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 45566667653 3456777777765432 2335556688999999999887542211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++ +++++|+|+++|+.+++.++.++++. |++++|+|+++...++..|++++.+|++. ++
T Consensus 88 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 149 (388)
T PRK07337 88 ---------VAP-ERIVVTAGASAALLLACLALVERGDE--------VLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERF 149 (388)
T ss_pred ---------CCh-HhEEEecCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEeecCCccCC
Confidence 133 38999999999999999998877776 99999999999999999999999999973 56
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|++++++.+++++++|++++|+||||.+ +++++|.++|+++++++++|++|.++... +......+ .+
T Consensus 150 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~---~~ 221 (388)
T PRK07337 150 QLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYD-----AAPVSALS---LG 221 (388)
T ss_pred cCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccC-----CCCcChhh---cc
Confidence 899999999999899999999999999998 56899999999999999999999876431 11101111 12
Q ss_pred ccEE-EecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 336 VTSI-SVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~-~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.+++ +.|++|... ....+|+++.. +++.+
T Consensus 222 ~~vi~~~S~SK~~~~~G~RiG~~~~~-~~l~~ 252 (388)
T PRK07337 222 DDVITINSFSKYFNMTGWRLGWLVVP-EALVG 252 (388)
T ss_pred CCEEEEEechhhcCCchhheeeeecC-HHHHH
Confidence 3444 558899842 33558996654 44433
No 79
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.88 E-value=5.9e-21 Score=196.10 Aligned_cols=210 Identities=16% Similarity=0.145 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC
Q psy10210 114 RLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE 193 (435)
Q Consensus 114 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~ 193 (435)
|..+++.+.+.+.... .+...|....|.+++|+++++++...... + .++
T Consensus 90 P~~~~~~~~~~~~~~~----~~~~~Y~~~~G~~~LR~aia~~~~~~~g~-~-------------------------~~~- 138 (481)
T PTZ00377 90 PADVVARAKEYLNAIG----GGTGAYTDSAGYPFVRKAVAAFIERRDGV-P-------------------------KDP- 138 (481)
T ss_pred CHHHHHHHHHHHHhCC----CcccCcCcccCCHHHHHHHHHHHHHhcCC-C-------------------------CCh-
Confidence 4466666655444321 12344666667888888888777653221 1 233
Q ss_pred CceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh
Q psy10210 194 TCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT 270 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~ 270 (435)
++|++|+|+++++.+++.++. +++|. |++++|+|+.+...++..|++++.+|++ +++.+|+++++++++
T Consensus 139 ~~I~it~Ga~~al~~~~~~l~~~~gD~--------Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~ 210 (481)
T PTZ00377 139 SDIFLTDGASSGIKLLLQLLIGDPSDG--------VMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYE 210 (481)
T ss_pred hhEEEcCCHHHHHHHHHHHhccCCCCE--------EEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHH
Confidence 489999999999999999997 67776 9999999999999999999999999987 346899999999987
Q ss_pred c------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-----CCCCC--
Q psy10210 271 G------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-----DFSLP-- 334 (435)
Q Consensus 271 ~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-----d~~~~-- 334 (435)
+ +++++++++||||||.+ +.+++|+++|++||+++|+|++|+.+.+. + +.+..++ ++...
T Consensus 211 ~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~--~--~~~~~s~~~~~~~l~~~~~ 286 (481)
T PTZ00377 211 QAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYD--G--EKPFISFRKVLLELPAEYN 286 (481)
T ss_pred HHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccC--C--CCCcccHHHHHHhhccccc
Confidence 5 78999999999999999 55999999999999999999999887541 0 1111111 11111
Q ss_pred -Cc-cEEEecCCCCCC--ccCCcEEEEE--eCCccccc
Q psy10210 335 -GV-TSISVDTHKYGF--TPKGSSVVLY--RDLKYKHC 366 (435)
Q Consensus 335 -gv-d~~~~s~hK~~~--~p~g~g~il~--~~~~~~~~ 366 (435)
+. .++..|+.|..+ .+..+|+++. .++++.+.
T Consensus 287 ~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~ 324 (481)
T PTZ00377 287 TDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQ 324 (481)
T ss_pred CCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHH
Confidence 12 244558999533 4567899766 25555443
No 80
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=9.2e-21 Score=191.78 Aligned_cols=216 Identities=21% Similarity=0.173 Sum_probs=162.4
Q ss_pred CCccccCCCCC---CCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210 100 GLEYFLELPSQ---GRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM 176 (435)
Q Consensus 100 ~~~~~~~~P~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
.+.+..+-|+. ..+++++.+.+.+.+..+. ...|....|.+++++++++.+...... .
T Consensus 54 ~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~~~-~------------ 114 (430)
T PLN00145 54 VLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGK------YNSYSTCVGLLPARRAIAEYLSRDLPY-E------------ 114 (430)
T ss_pred eeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCc------CCCCCCCccCHHHHHHHHHHHhhccCC-C------------
Confidence 34444555541 2456778888888776421 224556678999999999988653221 1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~- 255 (435)
.++ +++++|+|+++|+.+++.++.++++. |++++|+|+.+...+...|++++.+++.
T Consensus 115 -------------~~~-~~v~it~G~~~al~l~~~~l~~~Gd~--------Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~ 172 (430)
T PLN00145 115 -------------LST-DDIYLTAGCAQAIEIIMSVLAQPGAN--------ILLPRPGYPLYEARAVFSGLEVRHFDLLP 172 (430)
T ss_pred -------------CCh-hhEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEeeCCc
Confidence 133 38999999999999999999877776 9999999999999999999999999874
Q ss_pred -CCccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D 330 (435)
Q Consensus 256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d 330 (435)
+++.+|+++++++++++++++++++||||||.+- .+++|.++|++||+++|+|++|+.+.+. +....++ .
T Consensus 173 ~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~-----~~~~~~~~~ 247 (430)
T PLN00145 173 ERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFG-----SKPFVPMGV 247 (430)
T ss_pred ccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccC-----CCCccchhh
Confidence 4688999999999999999999999999999994 5889999999999999999999987642 1111121 1
Q ss_pred CCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210 331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL 361 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~ 361 (435)
+......+...|+.|. +.....+|+++..++
T Consensus 248 ~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~ 279 (430)
T PLN00145 248 FGEVAPVLTLGSISKRWVVPGWRLGWIATCDP 279 (430)
T ss_pred hcccCcEEEEeccccccCCCCeeEEEEEEecc
Confidence 1112234566689998 444577899877543
No 81
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.88 E-value=5.4e-21 Score=191.95 Aligned_cols=219 Identities=17% Similarity=0.156 Sum_probs=162.4
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
.+.+..+.|+.+ +++.+.+.+.+.+. ....|....|.+++++++++++.+....+.+
T Consensus 31 ~i~l~~~~p~~~-~~~~~~~~~~~~~~--------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-------------- 87 (396)
T PRK09147 31 PISLSIGEPKHP-TPAFIKDALAANLD--------GLASYPTTAGLPALREAIAAWLERRYGLPAL-------------- 87 (396)
T ss_pred eEecCCCCCCCC-CCHHHHHHHHHHhh--------hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcC--------------
Confidence 445566667653 35667777766543 1344666778999999999998764221101
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHH---hhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDY---AREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~---~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~ 256 (435)
++++++++|+|+++++.++++++.++ ++. |++++|+|+.+...++..|++++.||+++
T Consensus 88 -----------~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~vp~~~ 148 (396)
T PRK09147 88 -----------DPATQVLPVNGSREALFAFAQTVIDRDGPGPL--------VVCPNPFYQIYEGAALLAGAEPYFLNCDP 148 (396)
T ss_pred -----------CccceEEECCChHHHHHHHHHHHcCCCCCCCE--------EEEcCCCccchHHHHHhcCCEEEEeccCc
Confidence 23337999999999999999999887 555 99999999999999999999999999973
Q ss_pred --CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-C-
Q psy10210 257 --SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-F- 329 (435)
Q Consensus 257 --~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~- 329 (435)
++.+|++++++.+.++++++++++||||||.+ +.+++|+++|++|+++|++|++|+.+.+. .. .+... +
T Consensus 149 ~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~--~~--~~~~~~~~ 224 (396)
T PRK09147 149 ANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFD--EA--APPLGLLE 224 (396)
T ss_pred cccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccC--CC--CCCchhhh
Confidence 46799999998887889999999999999999 67899999999999999999999987642 10 00000 1
Q ss_pred -----CCCCCCccEEEecCCC-CCCccCCcEEEEEeCCcccc
Q psy10210 330 -----DFSLPGVTSISVDTHK-YGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 330 -----d~~~~gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~ 365 (435)
+.....-.++..|+.| ++.+...+|+++ .++++.+
T Consensus 225 ~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~-~~~~l~~ 265 (396)
T PRK09147 225 AAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA-GDAALLK 265 (396)
T ss_pred hccccCccccccEEEEeccccccCCccceeeeec-CCHHHHH
Confidence 0001123477778999 555567889955 4455543
No 82
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.88 E-value=1.4e-20 Score=189.19 Aligned_cols=213 Identities=19% Similarity=0.262 Sum_probs=162.4
Q ss_pred CccccCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210 101 LEYFLELPS---QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME 177 (435)
Q Consensus 101 ~~~~~~~P~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 177 (435)
..+..+.|+ .-.+++.+.+.+.+.+... ....|.+..|.+++++++++.+..... .+
T Consensus 34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~Y~~~~g~~~lr~aia~~~~~~~~--~~------------ 93 (401)
T TIGR01264 34 IKLSIGDPTVFGNLPTDPEVMQAMKDSLDSG------KYNGYAPTVGALSAREAIASYYHNPDG--PI------------ 93 (401)
T ss_pred eecCCCCCCCcCCCCCCHHHHHHHHHHHhcc------CCCCCCCCCCCHHHHHHHHHHHhhcCC--CC------------
Confidence 455666675 2345667788777765532 123466777899999999999876321 11
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-- 255 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-- 255 (435)
++ +++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.++++
T Consensus 94 -------------~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~ 151 (401)
T TIGR01264 94 -------------EA-DDVVLCSGCSHAIEMCIAALANAGQN--------ILVPRPGFPLYETLAESMGIEVKLYNLLPD 151 (401)
T ss_pred -------------CH-HHEEECcChHHHHHHHHHHhCCCCCE--------EEEeCCCChhHHHHHHHcCCEEEEeecCCc
Confidence 22 37999999999999999999877666 9999999999999999999999999886
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF 331 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~ 331 (435)
+++.+|+++++++++++++++++++|+||||.+ +++++|+++|+++|+++++|++|.+|.+. +...+++ .+
T Consensus 152 ~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~ 226 (401)
T TIGR01264 152 KSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFS-----GATFEPLASL 226 (401)
T ss_pred cCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccC-----CcccccHHHc
Confidence 357899999999998889999999999999999 57999999999999999999999988652 1111121 11
Q ss_pred CCCCccEEEecCCCC-CCccCCcEEEEEeC
Q psy10210 332 SLPGVTSISVDTHKY-GFTPKGSSVVLYRD 360 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~-~~~p~g~g~il~~~ 360 (435)
....-.+++.|+.|. +.+...+|+++..+
T Consensus 227 ~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 227 SSTVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCCCcEEEEccCcccCCCccceEEEEEecC
Confidence 111114567789995 66667899987765
No 83
>PRK12414 putative aminotransferase; Provisional
Probab=99.88 E-value=8.6e-21 Score=189.63 Aligned_cols=218 Identities=17% Similarity=0.135 Sum_probs=162.1
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
.+.+..+.|.. .+++.+.+.+.+..... ...|.+..|.+++++++++++....+..
T Consensus 31 ~i~l~~g~p~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~---------------- 86 (384)
T PRK12414 31 ALNLSQGAPNF-APDPALVEGVARAMRDG-------HNQYAPMAGIAALREALAEKTERLYGAR---------------- 86 (384)
T ss_pred eEEcCCCCCCC-CCCHHHHHHHHHHHHhC-------CCCcCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence 34556666765 34566777777655431 2345566788899998888876643221
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY 258 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~ 258 (435)
.++++++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.+|++ +++
T Consensus 87 ----------~~~~~~i~it~g~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 148 (384)
T PRK12414 87 ----------YDPASEVTVIASASEGLYAAISALVHPGDE--------VIYFEPSFDSYAPIVRLQGATPVAIKLSPEDF 148 (384)
T ss_pred ----------CCCCCcEEEECChHHHHHHHHHHhcCCCCE--------EEEeCCCccchHHHHHHcCCEEEEEecCcccc
Confidence 122247999999999999999999887776 9999999999999999999999999987 467
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~ 333 (435)
.+|++++++++++++++|++++||||||.+ +++++|.++|++||+++++|++|..+.+. +....++ .+. .
T Consensus 149 ~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~-----~~~~~~~~~~~~~ 223 (384)
T PRK12414 149 RVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFD-----GARHHSMARHREL 223 (384)
T ss_pred ccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCC-----CCCccCcccCcCc
Confidence 899999999998899999999999999998 78999999999999999999999876541 1111111 111 1
Q ss_pred CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.+-.+++.|++|..+ ....+|+++.. +++.+
T Consensus 224 ~~~~i~~~SfSK~~~~pGlRiG~~v~~-~~l~~ 255 (384)
T PRK12414 224 AERSVIVSSFGKSYHVTGWRVGYCLAP-AELMD 255 (384)
T ss_pred cCcEEEEecccccccCccceEEEEecC-HHHHH
Confidence 123467778999742 44668996654 45443
No 84
>PRK07777 aminotransferase; Validated
Probab=99.88 E-value=7.8e-21 Score=190.21 Aligned_cols=217 Identities=19% Similarity=0.141 Sum_probs=162.1
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|+... +.++++.+.+.+... ...|....|.+++++++++.+.......
T Consensus 26 ~i~l~~g~p~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~---------------- 81 (387)
T PRK07777 26 AVNLGQGFPDEDG-PPEMLEAAQEAIAGG-------VNQYPPGPGIPELRAAIAAQRRRRYGLE---------------- 81 (387)
T ss_pred eEEccCCCCCCCC-CHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence 3556667787755 456777777665432 2345566789999999998876542221
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC---
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--- 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--- 256 (435)
..+++++++|+|+++++.+++.++.++++. |+++.|+|+.+..+++..|.+++.+|+++
T Consensus 82 ----------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 143 (387)
T PRK07777 82 ----------YDPDTEVLVTVGATEAIAAAVLGLVEPGDE--------VLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGR 143 (387)
T ss_pred ----------CCCCCcEEEeCCcHHHHHHHHHHhcCCCCE--------EEEeCCCchhhHHHHHHCCCEEEEeecCCccC
Confidence 123336999999999999999988776666 99999999999999999999999999863
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CC
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FS 332 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~ 332 (435)
++.+|++++++++.+++++|++++|+||||.+ +++++|.++|++|++++++|++|+++.+. +....++. +.
T Consensus 144 ~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~-----~~~~~~~~~~~ 218 (387)
T PRK07777 144 GFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFD-----GARHLPLATLP 218 (387)
T ss_pred CCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccC-----CCCcccHhhCC
Confidence 45699999999998899999999999999998 56999999999999999999999887642 11111221 11
Q ss_pred -CCCccEEEecCCCCCC-ccCCcEEEEEeCCccc
Q psy10210 333 -LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYK 364 (435)
Q Consensus 333 -~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~ 364 (435)
..+.+++..|++|... ....+|+++. ++++.
T Consensus 219 ~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~ 251 (387)
T PRK07777 219 GMRERTVTISSAAKTFNVTGWKIGWACG-PAPLI 251 (387)
T ss_pred CCcCcEEEEeechhhccCcCceeEEEec-CHHHH
Confidence 1346788889999843 2345788654 44444
No 85
>PRK07324 transaminase; Validated
Probab=99.88 E-value=2.3e-21 Score=192.90 Aligned_cols=209 Identities=13% Similarity=0.048 Sum_probs=157.0
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+-|+. .+|..+ +.+.+.+... ...|+...|.+++++++++++..
T Consensus 29 ~~~~~~e~~~-~~~~~~-~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~~~~---------------------- 77 (373)
T PRK07324 29 DSLTLEELLA-LAGKNP-EAFYQELGQK-------KLTYGWIEGSPEFKEAVASLYQN---------------------- 77 (373)
T ss_pred CCCcHHHHHh-ccCcch-HHHHHHHhcC-------CccCCCCCCCHHHHHHHHHHhcC----------------------
Confidence 4455566655 455566 6666665432 34566777999999999987742
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~ 258 (435)
.++ +++++|+|+++++.+++.++.++++. |+++.|+|..+...++..|++++.+|++. ++
T Consensus 78 ---------~~~-~~vi~t~G~~~al~~~~~~l~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~ 139 (373)
T PRK07324 78 ---------VKP-ENILQTNGATGANFLVLYALVEPGDH--------VISVYPTYQQLYDIPESLGAEVDYWQLKEENGW 139 (373)
T ss_pred ---------CCh-hhEEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHcCCEEEEEecccccCC
Confidence 123 38999999999999999999887776 99999999999999999999999999973 45
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|+++++++++++++++++++|+||||.+-+ +++|+++|++||+++++|++|.++... +......+. ..
T Consensus 140 ~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~-----~~~~s~~~~--~~ 212 (373)
T PRK07324 140 LPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED-----GSTPSIADL--YE 212 (373)
T ss_pred CCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-----CCCCChhhc--cC
Confidence 68999999999889999999999999999955 999999999999999999999876541 100011121 12
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
-.+...|++|... ....+|+++. ++++.+.
T Consensus 213 ~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~ 243 (373)
T PRK07324 213 KGISTNSMSKTYSLPGIRVGWIAA-NEEVIDI 243 (373)
T ss_pred CEEEEecchhhcCCccceeEEEec-CHHHHHH
Confidence 2355668889743 3355799665 5655543
No 86
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.88 E-value=7.6e-21 Score=191.24 Aligned_cols=219 Identities=16% Similarity=0.151 Sum_probs=160.9
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+.. .|.++++.+.+..... ....|....|.+++|+++++++.......
T Consensus 36 ~~l~~g~p~~~-~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~----------------- 91 (403)
T PRK08636 36 IDFSMGNPDGP-TPQHIIDKLCESAQKP------KTHGYSVSKGIYKLRLAICNWYKRKYNVD----------------- 91 (403)
T ss_pred EEcCCcCCCCC-CCHHHHHHHHHHhcCC------ccCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 44555667764 4666777776655321 23456677799999999999987643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~ 258 (435)
.+++.++++|+|+++++.+++.+++++++. |++++|+|+.+...++..|++++.+|++ +++
T Consensus 92 ---------~~~~~~I~it~G~~~al~~~~~~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 154 (403)
T PRK08636 92 ---------LDPETEVVATMGSKEGYVHLVQAITNPGDV--------AIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDF 154 (403)
T ss_pred ---------CCCCCeEEECCChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEeccccccC
Confidence 123226999999999999999999988877 9999999999999999999999999985 446
Q ss_pred cccHHHH----HHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 259 TVDLAAL----QSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 259 ~~d~~~l----~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
.+|++.+ +++++ .+++++++++||||||.+ +.+++|+++|++|++++|+|++|+.+.+. +...++
T Consensus 155 ~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-----~~~~~~ 229 (403)
T PRK08636 155 ELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFD-----GYKTPS 229 (403)
T ss_pred ccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccC-----CCCCCC
Confidence 7887754 55554 478999999999999999 67899999999999999999999987541 111111
Q ss_pred C-CCC-CCCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 329 F-DFS-LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 329 ~-d~~-~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
+ ... .....+.+.|+.|.. .+...+|+++ .++++.+.
T Consensus 230 ~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv-~~~~li~~ 269 (403)
T PRK08636 230 ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV-GNKKLVGA 269 (403)
T ss_pred hhcCCCccccEEEEEecccccCCccceeeeee-CCHHHHHH
Confidence 1 111 112345567899985 3557789955 55555443
No 87
>PRK09082 methionine aminotransferase; Validated
Probab=99.88 E-value=4.3e-21 Score=191.97 Aligned_cols=218 Identities=16% Similarity=0.113 Sum_probs=162.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|+.+. ++.+.+.+.+..... ...|....|.+++++++++.+.+.....
T Consensus 33 i~l~~g~~~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~~a~~l~~~~~~~----------------- 87 (386)
T PRK09082 33 INLSQGFPDFDG-PPYLVEALAYAMAAG-------HNQYPPMTGVAALREAIAAKTARLYGRQ----------------- 87 (386)
T ss_pred EEecCCCCCCCC-CHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence 455666676533 456777777765432 2345566788999999988877643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCcc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYT 259 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~ 259 (435)
.+++.++++|+|+++|+.+++.++.++++. |++++|+|.++...++..|++++.+|++ +++.
T Consensus 88 ---------~~~~~~i~~t~G~~~al~~~~~~~~~~gd~--------Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (386)
T PRK09082 88 ---------YDADSEITVTAGATEALFAAILALVRPGDE--------VIVFDPSYDSYAPAIELAGGRAVRVALQPPDFR 150 (386)
T ss_pred ---------CCCCCcEEEeCCHHHHHHHHHHHHcCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEEecCccccc
Confidence 122237999999999999999998877776 9999999999999999999999999997 5678
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCC
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG 335 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g 335 (435)
+|+++++++++++++++++++|+||||.+ +++++|.++|++||+++|+|++|+.+.+. +..+ ....... ..+
T Consensus 151 ~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~--~~~~--~s~~~~~~~~~ 226 (386)
T PRK09082 151 VDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFD--GAGH--ASVLRHPELRE 226 (386)
T ss_pred CCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccC--CCCC--CChhhCcCccC
Confidence 99999999998899999999999999987 78999999999999999999999877552 1100 0111111 123
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
..++..|++|..+ ....+|+++. ++++.+
T Consensus 227 ~~i~~~S~SK~~~~~G~RiG~iv~-~~~l~~ 256 (386)
T PRK09082 227 RAFVVSSFGKTYHVTGWKVGYCVA-PAALSA 256 (386)
T ss_pred cEEEEeechhhccchhhhhhhhhC-CHHHHH
Confidence 4677778999842 3356799554 455544
No 88
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.88 E-value=8.1e-21 Score=187.50 Aligned_cols=216 Identities=14% Similarity=0.111 Sum_probs=156.6
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+..+.|..+. ++++.+.+.+.... ...|....|.+++++++++++......+
T Consensus 5 ~~~g~p~~~~-~~~~~~~~~~~~~~--------~~~Y~~~~G~~~lr~aia~~~~~~~g~~------------------- 56 (350)
T TIGR03537 5 FGTGDPKEPT-PPFIRKALIDAVPE--------VSQYPSALGTKALREAISGWFERRFGVK------------------- 56 (350)
T ss_pred ccCCCCCCCC-CHHHHHHHHHHHhc--------cCCCCCCCCCHHHHHHHHHHHHHHhCCC-------------------
Confidence 3445565433 45677777665321 2335566789999999999987642211
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTV 260 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~ 260 (435)
.+++.++++|+|+++++.+++.++.++++. +++|++++|+|+.+...++..|++++.+|++ .++.+
T Consensus 57 -------~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~-----~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 124 (350)
T TIGR03537 57 -------LDPDAQVLPSAGSKEAIFHFPLVFIDPEED-----RRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLL 124 (350)
T ss_pred -------CCCCCcEEEcCChHHHHHHHHHHHcCCCCC-----CceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCcc
Confidence 123237999999999999999998876631 2359999999999999999999999999996 34568
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
|++++++++.++++++++++|+||||.+-+ +++|.++|++||+++++|++|+.+... .......-....-.
T Consensus 125 d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~------~~~~~~~~~~~~~~ 198 (350)
T TIGR03537 125 RLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG------EPPHSALEVGIENV 198 (350)
T ss_pred CHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC------CCCCchhhcCcCCE
Confidence 999999999889999999999999999844 999999999999999999999876431 11111110011234
Q ss_pred EEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210 338 SISVDTHKYG-FTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 338 ~~~~s~hK~~-~~p~g~g~il~~~~~~~~ 365 (435)
++..|++|.. .....+|+++ .++++.+
T Consensus 199 i~~~s~SK~~g~~GlRiG~~~-~~~~~~~ 226 (350)
T TIGR03537 199 LAFHSLSKRSGMTGYRSGFVA-GDEKLIS 226 (350)
T ss_pred EEEeecccccCCccccceeee-cCHHHHH
Confidence 6666899973 2334578865 5555544
No 89
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=9.8e-21 Score=188.90 Aligned_cols=218 Identities=16% Similarity=0.114 Sum_probs=161.4
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|+.+ ++..+.+.+.+.+... ...|....|.+++++++++++......+
T Consensus 23 i~l~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~----------------- 77 (378)
T PRK07682 23 ISLGVGEPDFV-TPWNVREASIRSLEQG-------YTSYTANAGLLELRQEIAKYLKKRFAVS----------------- 77 (378)
T ss_pred EEeCCCCCCCC-CCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC-----------------
Confidence 45566667654 3445666666654421 2345566789999999999987643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~ 258 (435)
.++++++++|+|+++|+.++++++.++++. |++++|+|+.+...++..|.+++.+|++ +++
T Consensus 78 ---------~~~~~~i~~t~G~~~al~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 140 (378)
T PRK07682 78 ---------YDPNDEIIVTVGASQALDVAMRAIINPGDE--------VLIVEPSFVSYAPLVTLAGGVPVPVATTLENEF 140 (378)
T ss_pred ---------CCCCCcEEEeCChHHHHHHHHHHhCCCCCE--------EEEeCCCchhhHHHHHHcCCEEEEeecCCccCC
Confidence 123337999999999999999999877776 9999999999999999999999999985 357
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+|++++++++.++++++++++|+||||.+ +++++|.++|++|++++|+|++|+.+... .. ..+...++ ....
T Consensus 141 ~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~-~~~~~~~~-~~~~ 216 (378)
T PRK07682 141 KVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYD--EA-YTSFASIK-GMRE 216 (378)
T ss_pred CCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccC--CC-CCChhhcc-cccC
Confidence 899999999998899999999999999998 56999999999999999999999987652 10 00001111 1112
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
-.++..|++|... .+..+|+++. ++++.+
T Consensus 217 ~~i~~~S~SK~~~~~GlR~G~~~~-~~~~i~ 246 (378)
T PRK07682 217 RTILISGFSKGFAMTGWRLGFIAA-PVYFSE 246 (378)
T ss_pred CEEEEecCcccccChhhhhhhhhc-CHHHHH
Confidence 3577778999843 2345899665 455544
No 90
>PRK08363 alanine aminotransferase; Validated
Probab=99.87 E-value=9.9e-21 Score=190.17 Aligned_cols=212 Identities=15% Similarity=0.123 Sum_probs=158.8
Q ss_pred CCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHH
Q psy10210 100 GLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKME 177 (435)
Q Consensus 100 ~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e 177 (435)
.+.+..+.|. .-.+++.+.+.+.+.+... ...|....|.+++++++++++...... .
T Consensus 32 ~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~g~-~------------- 90 (398)
T PRK08363 32 VIRLNIGDPVKFDFQPPEHMKEAYCRAIKEG-------HNYYGPSEGLPELREAIVKREKRKNGV-D------------- 90 (398)
T ss_pred eEEEeCCCCCcCCCCCCHHHHHHHHHHHHcC-------CCCCCCCCCcHHHHHHHHHHHHHhcCC-C-------------
Confidence 3556667773 2235677888887766532 123445668999999999988764221 1
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE-ecC-
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI-RLT- 255 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v-p~~- 255 (435)
.++ +++++|+|+++++.+++.++.++++. |++++|+|..+...++..|.+++.+ +.+
T Consensus 91 ------------~~~-~~i~it~G~~~al~~~~~~~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~ 149 (398)
T PRK08363 91 ------------ITP-DDVRVTAAVTEALQLIFGALLDPGDE--------ILIPGPSYPPYTGLVKFYGGVPVEYRTIEE 149 (398)
T ss_pred ------------CCh-hhEEEeCCHHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCEEEEeccccc
Confidence 233 38999999999999999999877776 9999999999999999999998888 555
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
+++.+|+++++++++++++++++++||||||.+ +++++|.++|+++|+++|+|++|+.+.+. +.......+.
T Consensus 150 ~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-----~~~~~~~~~~ 224 (398)
T PRK08363 150 EGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-----GKHVSPGSLT 224 (398)
T ss_pred cCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-----CcccCHHHcC
Confidence 456789999999998899999999999999998 45999999999999999999999876541 1000011111
Q ss_pred CCCccEEEecCCCC-CCccCCcEEEEE
Q psy10210 333 LPGVTSISVDTHKY-GFTPKGSSVVLY 358 (435)
Q Consensus 333 ~~gvd~~~~s~hK~-~~~p~g~g~il~ 358 (435)
...-.+++.|++|. +.++.++|+++.
T Consensus 225 ~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 225 KDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred cCCcEEEEecchhccCCccceEEEEEE
Confidence 11124556789998 555678999777
No 91
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=4.8e-21 Score=189.22 Aligned_cols=171 Identities=16% Similarity=0.180 Sum_probs=140.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC-CCchh-HHHHHHHcCCE
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT-TAHPA-FDKAANYFGMK 248 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~-~~~~~-~~~~~~~~g~~ 248 (435)
...++..++++.+++++|++++. ++++++|||+++..++.++..+++. +++.+ +.|.. +...++..|++
T Consensus 28 ~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~--------vi~~~~~~~~~~~~~~a~~~g~~ 99 (355)
T TIGR03301 28 EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGK--------LLVLINGAYGERLAKICEYLGIP 99 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCe--------EEEECCCchhhHHHHHHHHcCCc
Confidence 34577889999999999998653 5788999999999999998755544 55554 45544 56778889999
Q ss_pred EEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 249 VKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 249 v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
++.++.++++.+|++++++++.+ +++++++++++||+|.+.++++|.++|++||+++++|++++.+.
T Consensus 100 ~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~----------- 168 (355)
T TIGR03301 100 HTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGA----------- 168 (355)
T ss_pred eEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCC-----------
Confidence 99999887788999999999874 45678889999999999999999999999999999999875321
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~ 361 (435)
.++++...++|+++.++||++++|.|+|+++++++
T Consensus 169 ~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~ 203 (355)
T TIGR03301 169 IPIDIEELDVDALIASANKCLEGVPGFGFVIARRD 203 (355)
T ss_pred cccchhhcCccEEEecCCcccccCCceeEEEECHH
Confidence 25566667899999999999778899999777654
No 92
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.87 E-value=2.2e-20 Score=185.76 Aligned_cols=168 Identities=21% Similarity=0.219 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
...++++.+|+++|.++ +.+++|+++++..++.++.++++. |+++.+.|++....++..|++++.+|.+
T Consensus 52 ~~~~~~e~lA~~~g~~~---~~i~~g~~~a~~~~~~~l~~~gd~--------Vl~~~~~h~s~~~~~~~~g~~~~~~~~~ 120 (370)
T TIGR02539 52 PIHDFLEDLAEFLGMDE---ARVTHGAREGKFAVMHALCKEGDW--------VVLDGLAHYTSYVAAERAGLNVKEVPHT 120 (370)
T ss_pred HHHHHHHHHHHHhCCCc---eEEECChHHHHHHHHHHhhCCCCE--------EEECCcccHHHHHHHHHcCCEEEEEecC
Confidence 34455667889998863 567899999999999999876665 9999999999888899999999999986
Q ss_pred --CCccccHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 256 --SSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 256 --~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
+++.+|++++++++++ ++++|++++|+||+|.+.++++|.++|++||+++++|++|+.+..
T Consensus 121 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~---------- 190 (370)
T TIGR02539 121 GHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRM---------- 190 (370)
T ss_pred CcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCc----------
Confidence 3578999999999863 678999999999999999999999999999999999999975432
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
+.+....++|+++.++||++.++.++|+++.+ +++.+.
T Consensus 191 -~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~-~~~i~~ 228 (370)
T TIGR02539 191 -PVSAKEIGADFIVGSGHKSMAASGPCGVLGMS-EEWEDI 228 (370)
T ss_pred -CCCHHHcCCCEEEeeCcccccCCCCEEEEEEC-HHHHhh
Confidence 23333446899999999996555667886554 555444
No 93
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.87 E-value=1.4e-20 Score=188.59 Aligned_cols=219 Identities=19% Similarity=0.182 Sum_probs=160.6
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
.+.+..+.|+. .+++.+.+.+.+..... ...|.+..|.+++++++++++......+
T Consensus 32 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~---------------- 87 (391)
T PRK07309 32 ILKLTLGEPDF-TTPDHVKEAAKRAIDAN-------QSHYTGMAGLLELRQAAADFVKEKYNLD---------------- 87 (391)
T ss_pred eEEcCCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCcHHHHHHHHHHHHHHhCCC----------------
Confidence 35566666765 33556777777665432 1235566688999999999887542221
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Cc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SY 258 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~ 258 (435)
..+++++++|+|+++++.+++.++..+++. |++++|+|..+...++..|++++.+|+++ ++
T Consensus 88 ----------~~~~~~i~it~G~~~al~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 149 (391)
T PRK07309 88 ----------YAPENEILVTIGATEALSASLTAILEPGDK--------VLLPAPAYPGYEPIVNLVGAEIVEIDTTENDF 149 (391)
T ss_pred ----------CCCCCcEEEeCChHHHHHHHHHHhcCCCCE--------EEEeCCCCcchHHHHHHcCCEEEEEecCCcCC
Confidence 123348999999999999999998777766 99999999999999999999999999874 46
Q ss_pred cccHHHHHHHhhc---CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITG---NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 259 ~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
.+|++++++++++ +++++++++|+||||.+ +++++|.++|++||+++|+|++|+.+... +....+..-.
T Consensus 150 ~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~-----~~~~~~~~~~ 224 (391)
T PRK07309 150 VLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYT-----GEPHVSIAEY 224 (391)
T ss_pred cCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeC-----CCCCCCHHHh
Confidence 7999999999864 68999999999999997 56999999999999999999999987641 1111111101
Q ss_pred CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 333 LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
...-.++..|++|... ....+|+++. ++++.+.
T Consensus 225 ~~~~~i~~~S~SK~~g~~GlRvG~~v~-~~~~~~~ 258 (391)
T PRK07309 225 LPDQTILINGLSKSHAMTGWRIGLIFA-PAEFTAQ 258 (391)
T ss_pred ccCCEEEEecChhhccCccceeEEEEe-CHHHHHH
Confidence 1233567778999842 3355899554 4555443
No 94
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.2e-20 Score=182.72 Aligned_cols=243 Identities=14% Similarity=0.094 Sum_probs=199.5
Q ss_pred CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHH
Q psy10210 167 PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANY 244 (435)
Q Consensus 167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~ 244 (435)
.+..|.+.++..++.+.+...|+....+..+++++||.+++.++.++..++++ |++.....++ +.+.+++
T Consensus 30 ~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdk--------VLv~~nG~FG~R~~~ia~~ 101 (383)
T COG0075 30 GHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDK--------VLVVVNGKFGERFAEIAER 101 (383)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCe--------EEEEeCChHHHHHHHHHHH
Confidence 36678899999999999999999886567889999999999999999998887 8888877766 7899999
Q ss_pred cCCEEEEEecCCCccccHHHHHHHhhc--CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhccccc
Q psy10210 245 FGMKVKHIRLTSSYTVDLAALQSAITG--NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAA 322 (435)
Q Consensus 245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~--~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~ 322 (435)
+|++++.+..+..-.+|++++++++++ +.++|.++|..++||...|+++|+++|++||..++||++-+
T Consensus 102 ~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS---------- 171 (383)
T COG0075 102 YGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS---------- 171 (383)
T ss_pred hCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc----------
Confidence 999999999887778999999999984 46899999999999999999999999999999999999964
Q ss_pred CCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC------CCC-CccccCCCchHHHH
Q psy10210 323 GYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN------YGS-PSVSGSRSGGIIAT 395 (435)
Q Consensus 323 g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~------~~~-~~~~gsr~~~~ia~ 395 (435)
++..+++...+|+|++..+++|++.+|+|.|++.++++.+........+.|.-.. +.. .....+.+...+.+
T Consensus 172 -~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~a 250 (383)
T COG0075 172 -LGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYA 250 (383)
T ss_pred -CCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHH
Confidence 3445889999999999999999999999999999998765332111111111000 001 23345666677888
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 396 CWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 396 ~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
...+++.+-++|+.++.+++.+......+.+..
T Consensus 251 L~~al~~i~~EGle~r~~RH~~~~~a~r~~~~a 283 (383)
T COG0075 251 LREALDLILEEGLEARIARHRRLAEALRAGLEA 283 (383)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999998887777776653
No 95
>PRK07550 hypothetical protein; Provisional
Probab=99.87 E-value=2.8e-20 Score=186.15 Aligned_cols=215 Identities=16% Similarity=0.089 Sum_probs=159.8
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|.. .++..+.+.+.+..... ....|....|.+++++++++.+......+
T Consensus 31 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~---------------- 87 (386)
T PRK07550 31 LIDLSQAVPGY-PPPPELLRALAEAAADP------AAHLYGPVEGLPELREAYAAHYSRLYGAA---------------- 87 (386)
T ss_pred eEEeCCCCCCC-CCCHHHHHHHHHHHhCc------CCcCCCCCCCCHHHHHHHHHHHHHHhCCC----------------
Confidence 35566666665 34667777777765421 12345566789999999999887643321
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SS 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~ 257 (435)
..+ +++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.+|++ .+
T Consensus 88 ----------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 148 (386)
T PRK07550 88 ----------ISP-EQVHITSGCNQAFWAAMVTLAGAGDE--------VILPLPWYFNHKMWLDMLGIRPVYLPCDEGPG 148 (386)
T ss_pred ----------CCc-ceEEEecCcHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHhcCCEEEEEecCCCcC
Confidence 123 48999999999999999999877776 9999999999999999999999999997 35
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+.+|++++++++++++++|++++||||||.+ +++++|.++|++||+++|+|++|+.|... .+.....+.....
T Consensus 149 ~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~----~~~~~~~~~~~~~ 224 (386)
T PRK07550 149 LLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSG----GGAPHDLFADPDW 224 (386)
T ss_pred CCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccC----CCCCcchhhCCCc
Confidence 6689999999999899999999999999998 45899999999999999999999877431 0111111211111
Q ss_pred C-ccEEEecCCCCCC-ccCCcEEEEEeC
Q psy10210 335 G-VTSISVDTHKYGF-TPKGSSVVLYRD 360 (435)
Q Consensus 335 g-vd~~~~s~hK~~~-~p~g~g~il~~~ 360 (435)
+ -.+...|++|..+ +..++|+++..+
T Consensus 225 ~~~~i~~~S~SK~~g~~G~RiG~i~~~~ 252 (386)
T PRK07550 225 DDTLVHLYSFSKSYALTGHRVGAVVASP 252 (386)
T ss_pred cccEEEEecchhhccCcccceEeeecCH
Confidence 2 2455778999743 345689966644
No 96
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.6e-20 Score=188.79 Aligned_cols=216 Identities=14% Similarity=0.081 Sum_probs=159.4
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|..+. ++.+.+.+.+.+... ...|....|.+++++++++.+.++....
T Consensus 36 i~l~~g~p~~~~-~~~~~~~~~~~~~~~-------~~~Y~~~~G~~~lr~~ia~~l~~~~g~~----------------- 90 (402)
T PRK06107 36 VDLTVGEPDFDT-PDHIKQAAVAAIERG-------ETKYTLVNGTPALRKAIIAKLERRNGLH----------------- 90 (402)
T ss_pred EEcCCCCCCCCC-CHHHHHHHHHHHHcC-------CCCCCCCCCCHHHHHHHHHHHHHhcCCC-----------------
Confidence 456667777644 455777777766532 2456677899999999999887643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSY 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~ 258 (435)
..+ +++++|+|+++|+.+++.++.++++. |++++|+|..+...+...+.+++.++++ +++
T Consensus 91 ---------~~~-~~i~~t~G~~~al~~~~~~~~~~gd~--------vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~ 152 (402)
T PRK06107 91 ---------YAD-NEITVGGGAKQAIFLALMATLEAGDE--------VIIPAPYWVSYPDMVLANDGTPVIVACPEEQGF 152 (402)
T ss_pred ---------CCh-hhEEEeCCHHHHHHHHHHHhcCCCCE--------EEEecCCCcCHHHHHHHcCCEEEEecCCcccCC
Confidence 123 38999999999999999988777776 9999999999998888889998888885 346
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCC---C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFD---F 331 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d---~ 331 (435)
.+|++++++++.++++++++++|+||||.+ +++++|+++|++| ++++|+|++|+.+.+. +.+.+.+. .
T Consensus 153 ~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~-----~~~~~~~~~~~~ 227 (402)
T PRK06107 153 KLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFD-----DEPTPHLLAAAP 227 (402)
T ss_pred CCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccC-----CCCCCCHHHhCc
Confidence 789999999998889999999999999988 5688899999998 9999999999876431 11111111 1
Q ss_pred CCCCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 332 SLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
...+-.+...|++|... ....+|+++ .++++.+
T Consensus 228 ~~~~~vi~~~S~SK~~~~pGlRiG~~~-~~~~~~~ 261 (402)
T PRK06107 228 ELRDRVLVTNGVSKTYAMTGWRIGYAA-GPADLIA 261 (402)
T ss_pred CccCCEEEEeccchhhcCcccceeeee-cCHHHHH
Confidence 11123455667899842 235579955 4555544
No 97
>PRK07683 aminotransferase A; Validated
Probab=99.87 E-value=2.3e-20 Score=186.82 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=162.6
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|.. ..++.+.+.+.+.+... ...|....|.+++++++++++......+
T Consensus 31 i~l~~~~p~~-~~~~~~~~a~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~l~~~~g~~----------------- 85 (387)
T PRK07683 31 ISLTIGQPDF-PTPSHVKEAAKRAITEN-------YTSYTHNAGLLELRKAACNFVKDKYDLH----------------- 85 (387)
T ss_pred EEecCCCCCC-CCCHHHHHHHHHHHhcC-------CCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 4556666764 33567777777766532 2345566789999999999887542211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCcc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYT 259 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~ 259 (435)
.+++.++++|+|+++|+.+++.++.++++. |++++|+|+.+...++..|++++.+|++ +++.
T Consensus 86 ---------~~~~~~I~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 148 (387)
T PRK07683 86 ---------YSPESEIIVTIGASEAIDIAFRTILEPGTE--------VILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFR 148 (387)
T ss_pred ---------CCCCCcEEEeCChHHHHHHHHHHhCCCCCE--------EEEcCCCccchHHHHHHcCCEEEEeecCcccCC
Confidence 123237999999999999999998776666 9999999999999999999999999987 4567
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCC
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPG 335 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~g 335 (435)
+|.+++++.++++++++++++|+||||.+ +++++|.++|+++|+++|+|++|+.+.+. +. ..+...+ ...+
T Consensus 149 ~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~--~~---~~~~~~~~~~~~ 223 (387)
T PRK07683 149 LTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYE--QP---HTSIAHFPEMRE 223 (387)
T ss_pred CCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeC--CC---cCChhhccCCcC
Confidence 78999999998899999999999999998 56999999999999999999999987541 11 1111122 1223
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
-.++..|+.|..+ +...+|+++. ++++.+.
T Consensus 224 ~vi~~~s~SK~~~~pGlRiG~i~~-~~~l~~~ 254 (387)
T PRK07683 224 KTIVINGLSKSHSMTGWRIGFLFA-PSYLAKH 254 (387)
T ss_pred CeEEEeeccccccCccceeEEEEc-CHHHHHH
Confidence 4567788999854 3466899654 4454443
No 98
>PRK09148 aminotransferase; Validated
Probab=99.87 E-value=2.4e-20 Score=187.66 Aligned_cols=218 Identities=12% Similarity=0.054 Sum_probs=155.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|+.+. +..+++.+.+.+... ....|....|.+++++++++++......+
T Consensus 33 i~l~~~~p~~~~-~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~----------------- 88 (405)
T PRK09148 33 IDLGMGNPDLPT-PQHIVDKLCETAQDP------RTHRYSASKGIPGLRRAQAAYYARRFGVK----------------- 88 (405)
T ss_pred EEcCCCCCCCCC-CHHHHHHHHHHHcCc------ccCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 455666776544 567777777665421 13456666789999999999997643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC--c
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS--Y 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~--~ 258 (435)
.+++.++++|+|+++++.+++.+++++++. |++++|+|+.+...+...|++++.+|++.+ +
T Consensus 89 ---------~~~~~~I~it~G~~~al~~~~~~l~~~gd~--------Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~ 151 (405)
T PRK09148 89 ---------LNPDTQVVATLGSKEGFANMAQAITAPGDV--------ILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF 151 (405)
T ss_pred ---------CCCCCcEEEcCChHHHHHHHHHHhcCCCCE--------EEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC
Confidence 123337999999999999999999888777 999999999999999999999999998743 3
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS-L 333 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~-~ 333 (435)
..++++..+...++++++++++||||||.+ +.+++|.++|++||+++++|++|+.+.+. + ...+.+ .+. .
T Consensus 152 ~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~--~---~~~~s~~~~~~~ 226 (405)
T PRK09148 152 FPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFD--G---NPPPSVLQVPGA 226 (405)
T ss_pred ccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcC--C---CCCCChhhCCCc
Confidence 334444333334678999999999999999 45688999999999999999999987641 1 111111 111 1
Q ss_pred CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.+..+...|++|... ....+|+++ .++++.+
T Consensus 227 ~~~~i~~~SfSK~~~~pGlR~G~~v-~~~~~i~ 258 (405)
T PRK09148 227 KDVTVEFTSMSKTFSMAGWRMGFAV-GNERLIA 258 (405)
T ss_pred cCcEEEEeccccccCCcchheeeee-CCHHHHH
Confidence 234556788999843 335689965 5555544
No 99
>PRK06855 aminotransferase; Validated
Probab=99.87 E-value=2.6e-20 Score=188.83 Aligned_cols=210 Identities=12% Similarity=0.053 Sum_probs=153.9
Q ss_pred cccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 103 YFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 103 ~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+..+.|. ...+|..+.+.+.+.+.. ...+.|.+..|.+++|+++++++.+....+
T Consensus 37 ~~~G~p~~~~~~~p~~~~~a~~~~~~~------~~~~~Y~~~~G~~~LReaia~~~~~~~g~~----------------- 93 (433)
T PRK06855 37 ENIGDPIAKGEKIPDWMKEIVAELVMD------DKSYGYCPTKGVLETREFLAELNNKRGGAQ----------------- 93 (433)
T ss_pred cccCCCcccCCCCCHHHHHHHHHHhhc------CCCCCCCCCCCCHHHHHHHHHHHHhccCCC-----------------
Confidence 3445562 225566777777776543 134567778899999999999997753221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-HHcCCEEEEEecC--CC
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-NYFGMKVKHIRLT--SS 257 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-~~~g~~v~~vp~~--~~ 257 (435)
.++ +++++|+|+++++.+++. +.++++. |++++|+|+.+.... ...|++++.+|++ ++
T Consensus 94 ---------~~~-~~I~it~G~~~al~~~~~-l~~~Gd~--------Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~ 154 (433)
T PRK06855 94 ---------ITP-DDIIFFNGLGDAIAKIYG-LLRREAR--------VIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENN 154 (433)
T ss_pred ---------CCH-hHEEEcCcHHHHHHHHHH-hcCCCCe--------EEEeCCCCchHHHHHHHhcCCeEEEEecccccC
Confidence 233 389999999999999985 6666666 999999999977553 4558899999986 34
Q ss_pred ccccHHHHHHHhh--cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CC
Q psy10210 258 YTVDLAALQSAIT--GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DF 331 (435)
Q Consensus 258 ~~~d~~~l~~~i~--~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~ 331 (435)
+.+|++++++++. ++++++++++|+||||.+ +.+++|+++|++||++||+|++|+.+.+. +...+++ .+
T Consensus 155 ~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~-----~~~~~sl~~~ 229 (433)
T PRK06855 155 WYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYN-----GKKTVPLSEV 229 (433)
T ss_pred CCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccC-----CCCCCCHHHH
Confidence 6789999999986 467899999999999999 67889999999999999999999988642 1111121 11
Q ss_pred CCCCccEEEecCCCCCC-ccCCcEEEEEe
Q psy10210 332 SLPGVTSISVDTHKYGF-TPKGSSVVLYR 359 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~~~-~p~g~g~il~~ 359 (435)
...+..+...|+.|... ....+|+++..
T Consensus 230 ~~~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 230 IGDVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred cCcCCeEEEecCccccCCCcceEEEEEEe
Confidence 11122466778999853 44778998763
No 100
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.87 E-value=9.2e-21 Score=192.31 Aligned_cols=255 Identities=11% Similarity=0.001 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCH
Q psy10210 35 SVLTTVYVYESLFSRDPFDTDSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNR 114 (435)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 114 (435)
+.-.+...|+.|.++|+|..++..+.+++.... ...... . ........+..+.|+....|
T Consensus 42 sr~tv~~a~~~L~~~g~i~~~~~~G~~v~~~~~---------~~~~~~----~-------~~~~~~i~L~~g~p~~~~~p 101 (431)
T PRK15481 42 NRNTVAAAYKRLVTAGLAQSQGRNGTVIRGSPS---------PVALEG----G-------DPGTPLHDLAGGNPDPQRLP 101 (431)
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCCceEEccCcc---------hhhhcc----c-------CCcchhhhhhcCCCChhHhH
Confidence 334456678888888888776655555432110 000000 0 00001123444555543323
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC
Q psy10210 115 LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194 (435)
Q Consensus 115 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~ 194 (435)
.+.+.+.+.... ...|....|.+++++++++++.... .+++
T Consensus 102 -~~~~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~~~~~~------------------------------~~~~ 142 (431)
T PRK15481 102 -DLSRYFARLSRT--------PRLYGDAPVSPELHAWAARWLRDDC------------------------------PVAF 142 (431)
T ss_pred -HHHHHHHHhhhh--------hhhcCCcCCCHHHHHHHHHHHhhcc------------------------------CCcC
Confidence 344444443221 1235555677788888877765421 1223
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
++++|+|+++++.+++.++.+++|. |++++|+|+.+...++..|++++.+|+++++ +|+++++++++++++
T Consensus 143 ~Iiit~G~~~al~~~~~~l~~pgd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~~k 213 (431)
T PRK15481 143 EIDLTSGAIDAIERLLCAHLLPGDS--------VAVEDPCFLSSINMLRYAGFSASPVSVDAEG-MQPEKLERALAQGAR 213 (431)
T ss_pred eEEEecCcHHHHHHHHHHhCCCCCE--------EEEeCCCcHHHHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcCCC
Confidence 8999999999999999999888877 9999999999999999999999999997655 899999999988888
Q ss_pred EEEEe-CCCCCccccc---CHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCc
Q psy10210 275 MLVGS-MPNFPYGTMD---DIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFT 349 (435)
Q Consensus 275 ~v~~~-~p~nptG~~~---~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~ 349 (435)
+++++ +||||||.+- .+++|.++|++| +++|++|++|+.+... +. .+.+.. ...-.++..|++|...+
T Consensus 214 ~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~-----~~-~~~~~~-~~~~vi~~~SfSK~~~~ 286 (431)
T PRK15481 214 AVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSS-----PY-HSVIPQ-TTQRWALIRSVSKALGP 286 (431)
T ss_pred EEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccC-----CC-CCCCcC-CCCCEEEEeeeccccCC
Confidence 88887 9999999994 456999999999 9999999999988531 11 111221 11234667789998544
Q ss_pred cCCcEEEEEeCCcccc
Q psy10210 350 PKGSSVVLYRDLKYKH 365 (435)
Q Consensus 350 p~g~g~il~~~~~~~~ 365 (435)
...+|+++ .++++..
T Consensus 287 GlRiG~~i-~~~~~~~ 301 (431)
T PRK15481 287 DLRLAFVA-SDSATSA 301 (431)
T ss_pred CceeEEEe-CCHHHHH
Confidence 46679855 4555543
No 101
>KOG0259|consensus
Probab=99.86 E-value=2.4e-20 Score=174.87 Aligned_cols=204 Identities=24% Similarity=0.274 Sum_probs=159.0
Q ss_pred CHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC
Q psy10210 113 NRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP 192 (435)
Q Consensus 113 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~ 192 (435)
+..+..+++.+.+..+ ..-+|++..|.+.-|+++++.+.+.. .+.+ .+
T Consensus 79 ts~~a~~Av~~al~Sg------k~N~Yaps~G~~~AR~AVAeYl~~~l-~~kl-------------------------~a 126 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSG------KGNGYAPSVGILPARRAVAEYLNRDL-PNKL-------------------------TA 126 (447)
T ss_pred CCHHHHHHHHHHHhcC------CCCCcCCccccHHHHHHHHHHhhcCC-CCcc-------------------------Cc
Confidence 3455666666666643 24456777799999999999865421 2222 22
Q ss_pred CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec--CCCccccHHHHHHHhh
Q psy10210 193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL--TSSYTVDLAALQSAIT 270 (435)
Q Consensus 193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~--~~~~~~d~~~l~~~i~ 270 (435)
+++++|+|.++|+.+++.++.+++.. |++|.|.|+-|...+.+.|++++.+.. +++|++|++.+|.+++
T Consensus 127 -~DV~ltsGC~qAIe~~i~~LA~p~aN--------ILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D 197 (447)
T KOG0259|consen 127 -DDVVLTSGCSQAIELAISSLANPGAN--------ILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD 197 (447)
T ss_pred -CceEEeccchHHHHHHHHHhcCCCCc--------eecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc
Confidence 38999999999999999999888776 999999999999999999999999986 3789999999999999
Q ss_pred cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe-cCCCC
Q psy10210 271 GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV-DTHKY 346 (435)
Q Consensus 271 ~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~-s~hK~ 346 (435)
+||.++++.+|+||.|.+ +.+++|+++|+++++++|.||+|+.+++. +-+..|..--..-|-++++ +..|-
T Consensus 198 ENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg-----~~pfvpmg~fssiVPVitlggisKr 272 (447)
T KOG0259|consen 198 ENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFG-----DKPFVPMGKFSSIVPVITLGGISKR 272 (447)
T ss_pred cCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecC-----CCCccchhhccccCceEeecccccc
Confidence 999999999999999999 78999999999999999999999998873 1111122111122445555 46663
Q ss_pred CCcc-CCcEEEEEeCCc
Q psy10210 347 GFTP-KGSSVVLYRDLK 362 (435)
Q Consensus 347 ~~~p-~g~g~il~~~~~ 362 (435)
...| -.+||++..|+.
T Consensus 273 W~VPGWRlGWi~~hD~~ 289 (447)
T KOG0259|consen 273 WIVPGWRLGWIALHDPR 289 (447)
T ss_pred cccCCceeeeEEEeccc
Confidence 2444 578999988875
No 102
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.86 E-value=1.2e-19 Score=182.46 Aligned_cols=216 Identities=21% Similarity=0.229 Sum_probs=161.3
Q ss_pred CCccccCCCC---CCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHH
Q psy10210 100 GLEYFLELPS---QGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKM 176 (435)
Q Consensus 100 ~~~~~~~~P~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (435)
...+..+.|. .-.+++++.+.+.+.+.... ...|....|.+++++++++.+...... .
T Consensus 33 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~~~-~------------ 93 (403)
T TIGR01265 33 IIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGK------FNGYAPSVGALAAREAVAEYLSSDLPG-K------------ 93 (403)
T ss_pred eEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHHhhcCC-C------------
Confidence 4555666664 23556778888887765321 124556678899999999888753211 1
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~- 255 (435)
.++ +++++|+|+|+|+.+++.++.++++. |++++|+|..+...++..|++++.++++
T Consensus 94 -------------~~~-~~ii~t~G~t~al~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 151 (403)
T TIGR01265 94 -------------LTA-DDVVLTSGCSQAIEICIEALANPGAN--------ILVPRPGFPLYDTRAAFSGLEVRLYDLLP 151 (403)
T ss_pred -------------CCH-HHEEEecChHHHHHHHHHHhCCCCCE--------EEEeCCCchhHHHHHHHcCCEEEEecCCc
Confidence 122 37999999999999999998766665 9999999999999999999999999875
Q ss_pred -CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-C
Q psy10210 256 -SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D 330 (435)
Q Consensus 256 -~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d 330 (435)
+++.+|+++++++++++++++++++|+||||.+ +++++|.++|+++|+++|+|++|+.+.+. +....++ .
T Consensus 152 ~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~ 226 (403)
T TIGR01265 152 EKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFG-----DAPFIPMAS 226 (403)
T ss_pred ccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-----CCCccchhh
Confidence 457899999999998899999999999999999 46999999999999999999999988642 1111111 1
Q ss_pred CCCCCccEEEecCCCC-CCccCCcEEEEEeCC
Q psy10210 331 FSLPGVTSISVDTHKY-GFTPKGSSVVLYRDL 361 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~ 361 (435)
+....-.+++.|+.|. +.....+|+++..++
T Consensus 227 ~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~ 258 (403)
T TIGR01265 227 FASIVPVLSLGGISKRWVVPGWRLGWIIIHDP 258 (403)
T ss_pred hccCCcEEEEeecccccCCCcceEEEEEEeCc
Confidence 1111113556689997 444577899877654
No 103
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.86 E-value=3e-20 Score=183.12 Aligned_cols=258 Identities=14% Similarity=0.082 Sum_probs=173.2
Q ss_pred cccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210 138 SGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR 214 (435)
Q Consensus 138 ~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~ 214 (435)
++..|-| +|++.+++.+.+..+.. +........+......++++.+++++|.+ ..+++++|++++..++.++.
T Consensus 7 ~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~la~~~~~~---~~iv~~sg~~a~~~~~~~~~ 82 (349)
T cd06454 7 CSNDYLGLANHPEVIEAAKEALDKYGV-GAGGSRLISGTSDLHEELEEELAEFHGKE---AALVFSSGYAANDGVLSTLA 82 (349)
T ss_pred ccCCccccCCCHHHHHHHHHHHHHhCC-CCCCcCeecCCchHHHHHHHHHHHHhCCC---CEEEeccHHHHHHHHHHHhc
Confidence 3344444 68899999988876422 11111122345666778888899999874 34666777899998888887
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-----CceEEEEeCCCCCccccc
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-----NTVMLVGSMPNFPYGTMD 289 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-----~~~~v~~~~p~nptG~~~ 289 (435)
++++. |++++++|+++...++..|++++.++. +|.+++++++++ +++++++++++||+|...
T Consensus 83 ~~gd~--------Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~ 149 (349)
T cd06454 83 GKGDL--------IISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIA 149 (349)
T ss_pred CCCCE--------EEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCcc
Confidence 66665 999999999999999999999988763 477788888764 578899999999999999
Q ss_pred CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210 290 DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF 369 (435)
Q Consensus 290 ~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~ 369 (435)
++++|.++|+++|+++|+|++|+.+.... .+.....++....+.|+++.|+||+ +++.| |+++ .++++.+....
T Consensus 150 ~~~~i~~~~~~~~~~livD~a~~~g~~~~---~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~g-G~i~-~~~~~~~~~~~ 223 (349)
T cd06454 150 PLPELVDLAKKYGAILFVDEAHSVGVYGP---HGRGVEEFGGLTDDVDIIMGTLGKA-FGAVG-GYIA-GSKELIDYLRS 223 (349)
T ss_pred CHHHHHHHHHHcCCEEEEEccccccccCC---CCCChhhhccccccCcEEEeechhh-hcccC-CEEE-CCHHHHHHHHH
Confidence 99999999999999999999997443321 0111112333445789999999998 45555 6644 45555433211
Q ss_pred ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210 370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l 426 (435)
....+. ..++.+...++++.++++.+.. +...+++++..+.+.+.++++
T Consensus 224 ~~~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 224 YARGFI--------FSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred hchhhh--------ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 111111 1123333344556666666533 445666666666666666554
No 104
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=3.2e-20 Score=186.17 Aligned_cols=222 Identities=16% Similarity=0.181 Sum_probs=162.4
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|..+ +++.+.+.+.+... . ...|....|.+++++++++++......+.
T Consensus 30 ~i~l~~~~p~~~-~~~~~~~a~~~~~~-~-------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~--------------- 85 (393)
T TIGR03538 30 PIALSIGEPKHP-TPAFVLEALRENLH-G-------LSTYPTTKGLPELRQAIARWLERRFDLPT--------------- 85 (393)
T ss_pred eEEecCCCCCCC-CCHHHHHHHHHHhh-c-------cCCCCCCCCCHHHHHHHHHHHHHhhCCcc---------------
Confidence 345566667763 45677777776543 1 23455677899999999999876432210
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~ 257 (435)
|.++++++++|+|+++++.+++.++.++++. ..|++++|+|+.+...++..|++++.+|+++ +
T Consensus 86 ---------~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~------~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 150 (393)
T TIGR03538 86 ---------GVDPERHVLPVNGTREALFAFAQAVINPGQA------PLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENG 150 (393)
T ss_pred ---------cCCCCceEEECCCcHHHHHHHHHHHcCCCCc------ceEEecCCCCcchHHHHHhcCCeEEEeeccccCC
Confidence 0133337999999999999999999877753 2389999999999999999999999999963 3
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC--CCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF--DFS 332 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~--d~~ 332 (435)
+.+|++++++++.++++++++++||||||.+ +.+++|+++|++|+++|++|++|..+... + +...++. ...
T Consensus 151 ~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~--~--~~~~~~~~~~~~ 226 (393)
T TIGR03538 151 FLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFD--E--GNPPAGLLQAAA 226 (393)
T ss_pred CCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccC--C--CCCCcCHHHhcc
Confidence 6789999999988889999999999999999 56899999999999999999999877541 0 0000010 000
Q ss_pred -----CCCccEEEecCCC-CCCccCCcEEEEEeCCcccc
Q psy10210 333 -----LPGVTSISVDTHK-YGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 333 -----~~gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~ 365 (435)
...-.+++.|+.| ++.+...+|+++. ++++.+
T Consensus 227 ~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~-~~~l~~ 264 (393)
T TIGR03538 227 QLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG-DAEILK 264 (393)
T ss_pred cccccccccEEEEecchhhcCCcccceEEEec-CHHHHH
Confidence 1112467778999 5666678999654 455443
No 105
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.86 E-value=1e-19 Score=192.51 Aligned_cols=300 Identities=16% Similarity=0.140 Sum_probs=204.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCcccccc-cCChHhHHHHHHHHHHhhcCCCCCCC-CcChhHHHHHHHHHHHHHHHh
Q psy10210 111 GRNRLEILELVSNYLARGHYDWKHGRVSGAV-YYYQQDLVDLLTEVFGLTSYTNPLHP-DIFPGVCKMEAEVIKMCARMF 188 (435)
Q Consensus 111 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~l~~~i~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~la~l~ 188 (435)
..++.++++.+.+..+++..--....+-|+. ..-.+.. ..+-.....|...+|++| +..++..++..++.+++++++
T Consensus 478 ~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~-~~~p~s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l~eLt 556 (954)
T PRK12566 478 HHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATS-EMIPITWPEFAQLHPFAPREQAEGYRAMIDELEAWLCAIT 556 (954)
T ss_pred CCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHH-hhhcccchhhhcCCCCCchhhhcCHHHHHHHHHHHHHHHH
Confidence 3688999999999877653211111111110 0001111 111113344455589999 889999999999999999999
Q ss_pred CCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHH
Q psy10210 189 NGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266 (435)
Q Consensus 189 g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~ 266 (435)
|.+.. .+. .+|+.+...++.+++.+... +|. .+.+|+++...|.+....+...|++++.+|++++|.+|+++|+
T Consensus 557 Gmd~~---Sl~p~sGA~gE~A~Lmair~yh~~-~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G~iDle~L~ 632 (954)
T PRK12566 557 GFDAI---CMQPNSGAQGEYAGLLAIRRYHRS-RGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDGNVDLDDLK 632 (954)
T ss_pred CCCeE---eecCCchHHHHHHHHHHHHHHHHh-cCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCCCcCHHHHH
Confidence 99743 444 47788888888888765544 554 3678999999997777778889999999999988999999999
Q ss_pred HHhh---cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEec
Q psy10210 267 SAIT---GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVD 342 (435)
Q Consensus 267 ~~i~---~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s 342 (435)
++++ +++++|++++|++-.+..+++++|.++|+++|+++++|.++.-... .++ ....|+|++.++
T Consensus 633 a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~-----------~l~~Pg~~GADi~~~s 701 (954)
T PRK12566 633 AKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV-----------GLARPADIGADVSHMN 701 (954)
T ss_pred HHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc-----------CCCChhhcCCCEEEec
Confidence 9997 6889999999998555557799999999999999999999852211 233 356799999999
Q ss_pred CCCCCCccCCcEEEEEeCCccccccccccCCCCC----CC---CCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210 343 THKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG----GN---YGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415 (435)
Q Consensus 343 ~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g----g~---~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~ 415 (435)
+|||+++|.|.|...++.=...+....+.+.|++ |. .++.+-.++-.+..+..+|..++.+|.+ +.+.....
T Consensus 702 ~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~a 780 (954)
T PRK12566 702 LHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVA 780 (954)
T ss_pred CCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHH
Confidence 9999888887766554441222221123344432 11 1112222333334456888889999998 66666545
Q ss_pred HHHHHHHHHhcC
Q psy10210 416 HFNYKSCLQNLS 427 (435)
Q Consensus 416 ~~~~~~~~~~l~ 427 (435)
..++.++.++|.
T Consensus 781 ilnAnYla~rL~ 792 (954)
T PRK12566 781 ILSANYLANQLG 792 (954)
T ss_pred HHHHHHHHHHhH
Confidence 555555555553
No 106
>PRK09265 aminotransferase AlaT; Validated
Probab=99.86 E-value=4.6e-20 Score=185.69 Aligned_cols=211 Identities=18% Similarity=0.144 Sum_probs=155.9
Q ss_pred CccccCCCCC-C-CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210 101 LEYFLELPSQ-G-RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA 178 (435)
Q Consensus 101 ~~~~~~~P~~-~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~ 178 (435)
..+..+.|.. + .++.++.+.+.+.... ...|....|.+++++++++++......
T Consensus 36 i~l~~g~p~~~~~~~~~~i~~~~~~~~~~--------~~~Y~~~~G~~~lr~~ia~~~~~~~~~---------------- 91 (404)
T PRK09265 36 LKLNIGNPAPFGFEAPDEILRDVIRNLPT--------AQGYSDSKGLFSARKAIMQYYQQKGIP---------------- 91 (404)
T ss_pred EEecCCCCCcCCCCCCHHHHHHHHHHhhc--------CCCCCCCCCcHHHHHHHHHHHhccCCC----------------
Confidence 4455555532 1 3567788877765431 234566778899999999988643211
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--C
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--S 256 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~ 256 (435)
+.++ +++++|+|+++++.+++.++.++++. |++++|+|..+..+++..|.+++.++++ .
T Consensus 92 ----------~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~ 152 (404)
T PRK09265 92 ----------DVDV-DDIYIGNGVSELIVMAMQALLNNGDE--------VLVPAPDYPLWTAAVSLSGGKPVHYLCDEEA 152 (404)
T ss_pred ----------CCCc-ccEEEeCChHHHHHHHHHHhCCCCCE--------EEEeCCCCcChHHHHHHcCCEEEEEeccccc
Confidence 1233 38999999999999999998777776 9999999999999999999999999876 3
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
++.+|++++++++++++++|++++|+||||.+-+ +++|.++|++||+++++|++|+.+.+. +....++....
T Consensus 153 ~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~ 227 (404)
T PRK09265 153 GWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYD-----GAVHISIASLA 227 (404)
T ss_pred CCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCC-----CCCcCCHHHcC
Confidence 5679999999999889999999999999999855 999999999999999999999987541 11111111111
Q ss_pred CCccE-EEecCCCCC-CccCCcEEEEEe
Q psy10210 334 PGVTS-ISVDTHKYG-FTPKGSSVVLYR 359 (435)
Q Consensus 334 ~gvd~-~~~s~hK~~-~~p~g~g~il~~ 359 (435)
..... ...|+.|.. .+...+|+++..
T Consensus 228 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 255 (404)
T PRK09265 228 PDLLCVTFNGLSKAYRVAGFRVGWMVLS 255 (404)
T ss_pred CCceEEEEecchhhccCcccceEEEEEe
Confidence 22233 445678984 344668997764
No 107
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=2.8e-20 Score=185.73 Aligned_cols=164 Identities=18% Similarity=0.205 Sum_probs=127.3
Q ss_pred HHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C--Cccc
Q psy10210 184 CARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S--SYTV 260 (435)
Q Consensus 184 la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~--~~~~ 260 (435)
+++++|.+++ ++++|+|+++++.+++.++..+++. |++++|+|..+...++..|++++.+|++ + ++.+
T Consensus 75 ia~~l~~~~~-~v~~~~g~t~al~~~~~~~~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 145 (380)
T PRK06225 75 ILKDLGLDDD-EALITAGATESLYLVMRAFLSPGDN--------AVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL 145 (380)
T ss_pred HHHhcCCCCC-cEEEeCCHHHHHHHHHHHhcCCCCE--------EEEcCCCCcchHHHHHHhCceEEeeccccccCCccC
Confidence 3333444554 8999999999999999998766665 9999999999999999999999999974 2 4689
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
|+++++++++++++++++++|+||||.+ +++++|.++|++||+++|+|++|++|... . .+.........
T Consensus 146 d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~------~--~~~~~~~~~~~ 217 (380)
T PRK06225 146 TPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE------H--TLAAEYAPEHT 217 (380)
T ss_pred CHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc------C--CchhhcCCCCE
Confidence 9999999999899999999999999997 67999999999999999999999876431 1 11111112345
Q ss_pred EEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
+...+++|++ ++.| +|+++.+ +++.+.
T Consensus 218 i~~~s~SK~~-g~~G~RiG~i~~~-~~l~~~ 246 (380)
T PRK06225 218 VTSYSFSKIF-GMAGLRIGAVVAT-PDLIEV 246 (380)
T ss_pred EEEeechhhc-CCccceeEEEecC-HHHHHH
Confidence 6666888985 5444 6996654 455443
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=3e-20 Score=188.44 Aligned_cols=199 Identities=18% Similarity=0.211 Sum_probs=146.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCc
Q psy10210 116 EILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETC 195 (435)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~ 195 (435)
.+.+.+.+.+..+ ...|+...|.+++++++++.+.. ..
T Consensus 58 a~~~a~~~a~~~g-------~~~Y~~~~g~~~Lreaia~~~~~-----------------------------------~~ 95 (460)
T PRK13238 58 AMSDRQWAAMMRG-------DEAYAGSRSYYRLEDAVKDIFGY-----------------------------------PY 95 (460)
T ss_pred hhhHHHHHHHHhC-------CcccCCCCCHHHHHHHHHHHhCC-----------------------------------Cc
Confidence 4666666666543 22455666788888888776642 15
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--------C--ccccHHHH
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--------S--YTVDLAAL 265 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--------~--~~~d~~~l 265 (435)
+++|+||++|+.+++.++.++|| |++++|.|..+...++..|++++.+|+++ . |.+|++++
T Consensus 96 vv~t~ggt~A~~~~~~all~pGD---------Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~L 166 (460)
T PRK13238 96 TIPTHQGRAAEQILFPVLIKKGD---------VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKL 166 (460)
T ss_pred EEECCCHHHHHHHHHHHhCCCCC---------EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHH
Confidence 89999999999999999876553 88999999999888999999999999852 2 34999999
Q ss_pred HHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccc--cCCCCCCCC-C---
Q psy10210 266 QSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA--AGYPLPPFD-F--- 331 (435)
Q Consensus 266 ~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~--~g~~~~~~d-~--- 331 (435)
++++++ +|++|++++|+||+| .+ +++++|.++|++||+++|+|+|+..--..|... .++...... .
T Consensus 167 e~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~ 246 (460)
T PRK13238 167 EALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIARE 246 (460)
T ss_pred HHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhh
Confidence 999984 799999999999998 45 678999999999999999999874311111111 111111110 0
Q ss_pred CCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 332 SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 332 ~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
.....|++++|+||.+++|.| |+++.+++++.+.
T Consensus 247 ~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~ 280 (460)
T PRK13238 247 MFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTE 280 (460)
T ss_pred hcccCcEEEEecccCCCCcce-eEEEcChHHHHHH
Confidence 012369999999999999887 8877777666554
No 109
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.86 E-value=8.9e-20 Score=182.97 Aligned_cols=214 Identities=18% Similarity=0.156 Sum_probs=161.2
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+. .+++.+.+.+.+...... .....|....|.+++++.+++++...... .
T Consensus 36 ~~l~~g~p~~-~~~~~v~~a~~~~~~~~~----~~~~~y~~~~g~~~lr~~ia~~l~~~~~~-~---------------- 93 (394)
T PRK06836 36 FDFSLGNPSV-PPPAAVKEALRELAEEED----PGLHGYMPNAGYPEVREAIAESLNRRFGT-P---------------- 93 (394)
T ss_pred EEecCcCCCC-CCCHHHHHHHHHHHhcCC----cCcccCCCCCCCHHHHHHHHHHHHHHhCC-C----------------
Confidence 4455566765 456778888877665321 11234556678999999999988764221 1
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC-cc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YT 259 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~-~~ 259 (435)
+++ +++++|+|+++++..++.++..+++. |++++|+|..+...++..|++++.+|++++ +.
T Consensus 94 ---------~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~ 155 (394)
T PRK06836 94 ---------LTA-DHIVMTCGAAGALNVALKAILNPGDE--------VIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQ 155 (394)
T ss_pred ---------CCc-CcEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCCCccHHHHHHHcCCEEEEEecCCccCc
Confidence 233 38999999999999999998776665 999999999999999999999999999854 78
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHH------cCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~------~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
+|+++++++++++++++++++|+||||.+ +++++|.++|++ ||+++++|++|..+... +...+.+
T Consensus 156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~- 229 (394)
T PRK06836 156 PDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYD-----GAEVPYI- 229 (394)
T ss_pred CCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccC-----CCCCCCh-
Confidence 99999999999899999999999999998 568888889999 89999999999987541 1111111
Q ss_pred CCCCCccEEEecCCCCCC-ccCCcEEEEEeC
Q psy10210 331 FSLPGVTSISVDTHKYGF-TPKGSSVVLYRD 360 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~ 360 (435)
....+-.++..|++|... ...++|+++..+
T Consensus 230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~ 260 (394)
T PRK06836 230 FKYYDNSIVVYSFSKSLSLPGERIGYIAVNP 260 (394)
T ss_pred HHccCcEEEEecchhhccCcceeeEEEecCH
Confidence 111223577778999743 346789966654
No 110
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.86 E-value=4.6e-20 Score=199.48 Aligned_cols=262 Identities=17% Similarity=0.082 Sum_probs=182.9
Q ss_pred HHHHHHHHHHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHH-HHhhhhcCCC
Q psy10210 148 LVDLLTEVFGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYR-DYAREEKGIS 224 (435)
Q Consensus 148 l~~~i~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~-~~~~~~~g~~ 224 (435)
+.+++.+.+.. .+.||.... .+....++..++++.+++++|+++++ .+++|+|+|+|+.++..++. .++
T Consensus 51 V~~~~~~~~~~-~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~g------- 122 (805)
T PLN02724 51 LEAALADFSSN-VYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSE------- 122 (805)
T ss_pred HHHHHHHHHhh-ccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCC-------
Confidence 33333333332 344554321 23456778899999999999997764 68999999999999988762 223
Q ss_pred CCeEEEeCCCchhHH---HHHHHcCCEEEEEecC--------CCccccH--HHHHHHh----------hcCceEEEEeCC
Q psy10210 225 LPEIVLPTTAHPAFD---KAANYFGMKVKHIRLT--------SSYTVDL--AALQSAI----------TGNTVMLVGSMP 281 (435)
Q Consensus 225 ~~~viv~~~~~~~~~---~~~~~~g~~v~~vp~~--------~~~~~d~--~~l~~~i----------~~~~~~v~~~~p 281 (435)
++|+++...|++.. ..++..|++++.+|++ ..+.+++ +++++.+ .++|++|++++.
T Consensus 123 -d~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~v 201 (805)
T PLN02724 123 -SHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSE 201 (805)
T ss_pred -CeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEcc
Confidence 45999888898854 3345569999999886 3344443 5676653 245789999999
Q ss_pred CCCcccccCHHHHHHHHHHc--------CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCc
Q psy10210 282 NFPYGTMDDIGAIAKLGEKY--------GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS 353 (435)
Q Consensus 282 ~nptG~~~~i~~i~~la~~~--------~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~ 353 (435)
+|.+|.+.|++.|.++++.. ++++++|++++.. +.++|+...++|++++|+|||+++|.|+
T Consensus 202 sN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g-----------~~piDv~~~~~Dfl~~S~HK~~GgP~G~ 270 (805)
T PLN02724 202 CNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCG-----------TSPPDLSRYPADFVVVSFYKIFGYPTGL 270 (805)
T ss_pred ccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcC-----------CCCCChhhcCCCEEEEecceeccCCCCc
Confidence 99999999999775555532 3579999998543 3478988889999999999997669999
Q ss_pred EEEEEeCCccccccccccCCCCCCCCC-----------------CCccccCCCchHHHHHHHHHHH---hcHHHHHHHHH
Q psy10210 354 SVVLYRDLKYKHCQYFVTSDWPGGNYG-----------------SPSVSGSRSGGIIATCWAAMMY---FGFEAQVWICV 413 (435)
Q Consensus 354 g~il~~~~~~~~~~~~~~~~~~gg~~~-----------------~~~~~gsr~~~~ia~~~a~l~~---~g~~g~~~~~~ 413 (435)
|+++++++.+ .. ..|.+.||... ..-..|+.+...++++.++++. +|.+.+.++.+
T Consensus 271 G~L~vr~~~~-~~---l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~ 346 (805)
T PLN02724 271 GALLVRRDAA-KL---LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTW 346 (805)
T ss_pred eEEEEehhhh-hh---hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 9988886433 22 23444444210 0113466776666666666554 57777888888
Q ss_pred HHHHHHHHHHHhcC------Cccccc
Q psy10210 414 RYHFNYKSCLQNLS------DLWLYL 433 (435)
Q Consensus 414 ~~~~~~~~~~~~l~------~l~~~~ 433 (435)
++.+++.+.+++++ .+..|.
T Consensus 347 ~L~~~l~~~L~~l~~~~g~~~v~iyg 372 (805)
T PLN02724 347 ALTHYVANSLRNLKHGNGAPVCVLYG 372 (805)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcC
Confidence 88888888888776 466664
No 111
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.86 E-value=2.3e-20 Score=191.33 Aligned_cols=192 Identities=16% Similarity=0.147 Sum_probs=144.9
Q ss_pred cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH
Q psy10210 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD 215 (435)
Q Consensus 136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~ 215 (435)
...|..+.|.+++++++++++.+..... . ..++ ++|++|+|+++++.+++.++.+
T Consensus 87 ~~~y~~~~G~~~LR~aiA~~l~~~~g~~-v-----------------------~v~p-e~Ivit~Ga~~al~~l~~~l~~ 141 (496)
T PLN02376 87 IANFQDYHGLKKFRQAIAHFMGKARGGK-V-----------------------TFDP-ERVVMSGGATGANETIMFCLAD 141 (496)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHhCCC-C-----------------------cCCh-hhEEEccchHHHHHHHHHHhCC
Confidence 3456777899999999999987643210 0 0234 3899999999999999999999
Q ss_pred HhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--CCccccHHHHHHHhh------cCceEEEEeCCCCCcc
Q psy10210 216 YAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--SSYTVDLAALQSAIT------GNTVMLVGSMPNFPYG 286 (435)
Q Consensus 216 ~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~~~~~d~~~l~~~i~------~~~~~v~~~~p~nptG 286 (435)
+|+. |++++|+|+.+...++ ..|++++.||++ +++.+|++++++++. .++++|++++|+||||
T Consensus 142 pGD~--------Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG 213 (496)
T PLN02376 142 PGDV--------FLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLG 213 (496)
T ss_pred CCCE--------EEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCC
Confidence 8887 9999999999998877 589999999996 457899999976542 3689999999999999
Q ss_pred cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC---C----CCC--CCCccEEEecCCCCC-CccCCc
Q psy10210 287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP---F----DFS--LPGVTSISVDTHKYG-FTPKGS 353 (435)
Q Consensus 287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~---~----d~~--~~gvd~~~~s~hK~~-~~p~g~ 353 (435)
.+ +.+++|+++|++|++++|+||+|+.+++. +...++ + +.. ......++.|++|.+ ..+..+
T Consensus 214 ~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~-----~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRv 288 (496)
T PLN02376 214 TMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFA-----GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRV 288 (496)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEEcCccccccC-----CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceE
Confidence 99 66888999999999999999999987642 111111 1 110 011223466899974 345778
Q ss_pred EEEEEeCCcccc
Q psy10210 354 SVVLYRDLKYKH 365 (435)
Q Consensus 354 g~il~~~~~~~~ 365 (435)
|+++..++.+..
T Consensus 289 G~li~~~~~l~~ 300 (496)
T PLN02376 289 GIVYSFNDSVVS 300 (496)
T ss_pred EEEEECCHHHHH
Confidence 997766665544
No 112
>PRK08175 aminotransferase; Validated
Probab=99.85 E-value=1.2e-19 Score=182.22 Aligned_cols=218 Identities=15% Similarity=0.154 Sum_probs=158.2
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|... .+..+++.+.+..... ....|....|.+++++++++++.+.....
T Consensus 32 i~l~~g~p~~~-~~~~~~~~~~~~~~~~------~~~~Y~~~~G~~~lr~aia~~~~~~~g~~----------------- 87 (395)
T PRK08175 32 IDFSMGNPDGP-TPPHIVEKLCEVAQRP------DTHGYSTSRGIPRLRRAISRWYQDRYDVD----------------- 87 (395)
T ss_pred EEcCCCCCCCC-CCHHHHHHHHHHHhCC------CcCCCCCCCCCHHHHHHHHHHHHHHhCCC-----------------
Confidence 34555667763 4556777777665431 23456677799999999999987642211
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV 260 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~ 260 (435)
+++++++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++++ .
T Consensus 88 ---------~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~ 149 (395)
T PRK08175 88 ---------IDPESEAIVTIGSKEGLAHLMLATLDHGDT--------VLVPNPSYPIHIYGAVIAGAQVRSVPLVEGV-D 149 (395)
T ss_pred ---------CCCCCcEEEccCcHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHHcCCeEEEEecccCC-C
Confidence 133337999999999999999988877776 9999999999999899999999999987543 3
Q ss_pred cHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCC-
Q psy10210 261 DLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFS- 332 (435)
Q Consensus 261 d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~- 332 (435)
+.++++++++ ++++++++++|+||||.+ +.+++|.++|++||+++|+|++|+.+... +...+++ .+.
T Consensus 150 ~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~-----~~~~~~~~~~~~ 224 (395)
T PRK08175 150 FFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYD-----GWKAPSIMQVPG 224 (395)
T ss_pred cHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccC-----CCCCcchhcCCC
Confidence 5788888776 378999999999999998 45689999999999999999999876541 1111111 111
Q ss_pred CCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 333 LPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
..+..+.+.|+.|..+ ....+|+++ .++++.+.
T Consensus 225 ~~~~~i~~~S~SK~~g~pGlRiG~~~-~~~~l~~~ 258 (395)
T PRK08175 225 AKDVAVEFFTLSKSYNMAGWRIGFMV-GNPELVSA 258 (395)
T ss_pred cccCEEEEeeccccccCcchhheeee-CCHHHHHH
Confidence 1234466788999853 335679855 55666543
No 113
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=4.9e-20 Score=177.03 Aligned_cols=266 Identities=17% Similarity=0.081 Sum_probs=198.0
Q ss_pred hCCCCCCCCCcccccccC-C--hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCCh
Q psy10210 126 ARGHYDWKHGRVSGAVYY-Y--QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGG 202 (435)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~-g--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~gg 202 (435)
+.++..|.+-..++++.. | +|.+.+++.++.++....+.+- ..+...++.+.+++..+ . .+.++++++|
T Consensus 38 D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~------~~~~~~~la~~L~~~s~-~-~d~vff~NSG 109 (404)
T COG4992 38 DQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF------YNEPQAELAEKLVELSP-F-ADRVFFCNSG 109 (404)
T ss_pred CCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc------CChHHHHHHHHHHhhCc-c-ccEEEEcCCc
Confidence 345556665555555544 4 8999999999888765443321 22445566777777776 2 3489999999
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHh
Q psy10210 203 TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i 269 (435)
+||++.|++.+|.++. +..+++||....+|++-...+-..+. .++++|. -|+++++++|
T Consensus 110 aEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf-----nDi~al~~ai 181 (404)
T COG4992 110 AEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF-----NDIEALEAAI 181 (404)
T ss_pred HHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC-----CCHHHHHHHh
Confidence 9999999999998875 34467799988888873332222221 2333333 2899999999
Q ss_pred hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecC
Q psy10210 270 TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDT 343 (435)
Q Consensus 270 ~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~ 343 (435)
+++|++|++...+-..|++ +.++++.++|++||+++|.||+|.|+ |+....|.+...|| |+++..
T Consensus 182 ~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~--------GRTGk~fA~e~~gV~PDI~tla- 252 (404)
T COG4992 182 DEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL--------GRTGKLFAYEHYGVEPDILTLA- 252 (404)
T ss_pred ccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCC--------CccchHHHHHHhCCCCCEEEee-
Confidence 9999999999999988888 67999999999999999999999987 44445666666676 777766
Q ss_pred CCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210 344 HKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL 423 (435)
Q Consensus 344 hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~ 423 (435)
|.++|..++|.++.+ +..... +.+.-.|.+|+..++++ +++.++++.+..+++.+++++..+.+.+.+
T Consensus 253 -K~LgGG~PigA~la~-~~~~~~---~~~G~HgSTfGGNpLac-------Av~~a~l~~l~~e~ll~~v~~~g~~~~~~L 320 (404)
T COG4992 253 -KALGGGFPIGAMLAT-EEIASA---FTPGDHGSTFGGNPLAC-------AVALAVLEVLLEEGLLENVREKGEYLLQRL 320 (404)
T ss_pred -ccccCCccceeeEEc-hhhhhc---CCCCcccCCCCcCHHHH-------HHHHHHHHHHcchhHHHHHHHHHHHHHHHH
Confidence 877777889998887 443332 45666676666655554 788899999999999999999999988888
Q ss_pred HhcCC
Q psy10210 424 QNLSD 428 (435)
Q Consensus 424 ~~l~~ 428 (435)
+++..
T Consensus 321 ~~l~~ 325 (404)
T COG4992 321 RELKR 325 (404)
T ss_pred HHHhh
Confidence 87543
No 114
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-19 Score=182.43 Aligned_cols=215 Identities=16% Similarity=0.167 Sum_probs=157.5
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|..+. ++.+.+.+.+... . ...|....|.+++++++++.+.... .
T Consensus 33 i~l~~~~~~~~~-~~~~~~a~~~~~~-~-------~~~Y~~~~g~~~lr~~ia~~~~~~~-~------------------ 84 (397)
T PRK07568 33 YHLNIGQPDIKT-PEVFFEAIKNYDE-E-------VLAYSHSQGIPELREAFAKYYKKWG-I------------------ 84 (397)
T ss_pred EEecCCCCCCCC-CHHHHHHHHHHhc-C-------CcCcCCCCCCHHHHHHHHHHHHHhC-C------------------
Confidence 345556666533 5667777665432 1 2345567789999999999887421 1
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCc-
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSY- 258 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~- 258 (435)
+.++ +++++|+|+++++.+++.++.++++. |++++|.|..+...++..|++++.+|++ +++
T Consensus 85 --------~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~ 147 (397)
T PRK07568 85 --------DVEP-DEILITNGGSEAILFAMMAICDPGDE--------ILVPEPFYANYNGFATSAGVKIVPVTTKIEEGF 147 (397)
T ss_pred --------CCCc-ceEEEcCChHHHHHHHHHHhcCCCCE--------EEEecCCCccHHHHHHHcCCEEEEeecCcccCC
Confidence 1233 38999999999999999988776666 9999999999998899999999999986 333
Q ss_pred c-ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCC
Q psy10210 259 T-VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSL 333 (435)
Q Consensus 259 ~-~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~ 333 (435)
. .+++++++++++++++|++++|+||||.+ +++++|+++|+++|+++|+|++|+++.+. +...+ ...+..
T Consensus 148 ~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~-----~~~~~s~~~~~~ 222 (397)
T PRK07568 148 HLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYD-----GLKYTSALSLEG 222 (397)
T ss_pred CCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccC-----CCCccChhhcCC
Confidence 3 35799999998899999999999999998 46899999999999999999999987542 11111 112211
Q ss_pred -CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 334 -PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 334 -~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
..-.+++.|++|... ....+|+++..++++.+
T Consensus 223 ~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~ 256 (397)
T PRK07568 223 LEDRVIIIDSVSKRYSACGARIGCLISKNKELIA 256 (397)
T ss_pred CcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence 222456678999743 34678997776666554
No 115
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=184.69 Aligned_cols=227 Identities=15% Similarity=0.108 Sum_probs=155.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEc---CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPETCGCMT---SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY---- 244 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t---~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~---- 244 (435)
...++|..+++.++++||++++ ++.++ +||++++.+++.++.++++. |++.+..|.+....+..
T Consensus 77 ~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt~an~~v~~al~~~gd~--------Ii~~~~ehg~~l~~~~~l~~~ 147 (452)
T PTZ00094 77 VVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGSPANFAVYTALLQPHDR--------IMGLDLPSGGHLTHGFYTAKK 147 (452)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchHHHHHHHHHHhcCCCCE--------EEecccccCCccccccccccc
Confidence 3456666789999999999765 55555 89999999999999766665 99988888886544321
Q ss_pred ------cCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhh
Q psy10210 245 ------FGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAP 317 (435)
Q Consensus 245 ------~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~ 317 (435)
.+.++..++++.+|.+|++++++++.+ +++++++. ++.+|...|+++|.++|+++|+++++|++|+.+..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~ 225 (452)
T PTZ00094 148 KVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVA 225 (452)
T ss_pred ccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhcccc
Confidence 123444566676789999999999964 66776654 334899999999999999999999999999877663
Q ss_pred cccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc-ccccCCCCCCCCCCCccccCCCchHHHHH
Q psy10210 318 FMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ-YFVTSDWPGGNYGSPSVSGSRSGGIIATC 396 (435)
Q Consensus 318 ~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~-~~~~~~~~gg~~~~~~~~gsr~~~~ia~~ 396 (435)
. +..+.++ .++|++++|+|||++||.| |+++++++ ..... ........ +.+.|+.....+++.
T Consensus 226 ~------~~~~~~~--~~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~~~~------p~~~G~~~~~~iaal 289 (452)
T PTZ00094 226 A------GVLPSPF--PYADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIENKINEAVF------PGLQGGPHNHQIAAI 289 (452)
T ss_pred C------CCCCCCC--CCCcEEEcCCccCCCCCCc-eEEEEecc-cchHHHHhhccccC------CCCCCCchHHHHHHH
Confidence 1 1112222 3799999999999889998 77777654 22110 00000000 112234444456677
Q ss_pred HHHHHHhcH---HHHHHHHHHHHHHHHHHHHh
Q psy10210 397 WAAMMYFGF---EAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 397 ~a~l~~~g~---~g~~~~~~~~~~~~~~~~~~ 425 (435)
.++++.+.. +.+.+++.++.+.+.+.+++
T Consensus 290 ~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~ 321 (452)
T PTZ00094 290 AVQLKEVQSPEWKEYAKQVLKNAKALAAALEK 321 (452)
T ss_pred HHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 777777633 44566666666666655544
No 116
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.85 E-value=6.5e-20 Score=181.53 Aligned_cols=248 Identities=17% Similarity=0.131 Sum_probs=167.7
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh----
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE---- 220 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~---- 220 (435)
.+++.+++.+....+ -...++..++++.+++++|.+ ++++|+|+|+|+.+++.++.++||..
T Consensus 26 ~~~v~~a~~~~~~~~-----------~~~~~~~~~~~~~~a~~~g~~---~~~~~~g~t~al~~al~al~~~Gd~~~~~~ 91 (363)
T TIGR01437 26 SDEVADAQKRGAQNY-----------FEIKELVNKTGEYIANLLGVE---DAVIVSSASAGIAQSVAAVITRGNRYLVEN 91 (363)
T ss_pred CHHHHHHHHHHHhcC-----------CCHHHHHHHHHHHHHHhhCCC---eEEEEcCHHHHHHHHHHHHhcCCCcchhhc
Confidence 566777776664331 023466777888889999864 57999999999999999998877620
Q ss_pred --c-CCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEE-EeCCCCCcccccCHH
Q psy10210 221 --K-GISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLV-GSMPNFPYGTMDDIG 292 (435)
Q Consensus 221 --~-g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~-~~~p~nptG~~~~i~ 292 (435)
+ -..+++|+++.|.|..+ ...+...|+++++++.+ +.+|+++++++++++|++++ +++++||+|.+.+++
T Consensus 92 ~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~ 169 (363)
T TIGR01437 92 LHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVE 169 (363)
T ss_pred ccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHH
Confidence 0 11245799999777654 56778889999998863 56999999999999998766 567889999999999
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS 372 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~ 372 (435)
+|.++|++||+++|+|++|+.-+ ......|+|++++|+||++.||. .|+++ .++++.+.. .+
T Consensus 170 ~i~~~a~~~gi~vivD~a~~~~~-------------~~~~~~g~D~~~~S~~K~l~gp~-~G~l~-~~~~~i~~~---~~ 231 (363)
T TIGR01437 170 DAAQVAQEHNLPLIVDAAAEEDL-------------QKYYRLGADLVIYSGAKAIEGPT-SGLVL-GKKKYIEWV---KL 231 (363)
T ss_pred HHHHHHHHcCCeEEEECCCCCch-------------HHHHHcCCCEEEEeCCcccCCCc-eEEEE-EcHHHHHHH---Hh
Confidence 99999999999999999996110 01112368999999999888887 68755 455444331 11
Q ss_pred CCCCCCCCCCccccCCCchHHHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q psy10210 373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYF---GFEAQVWICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~---g~~g~~~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
.+.+.. .... .++ ..++++.+++..+ +.+...++.++ .+.+.+.+++++++..+
T Consensus 232 ~~~~~~-~~~~-~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~-~~~l~~~L~~i~g~~~~ 288 (363)
T TIGR01437 232 QSKGIG-RAMK-VGK---ENILGLTAALEQYLSTGKESGAEMVAK-LTPFIEALNTLKGVSAS 288 (363)
T ss_pred ccCCCc-ceec-cCH---HHHHHHHHHHHHHHccCcccHHHHHHH-HHHHHHHHhcCCCeEEE
Confidence 122211 0000 111 1234444555443 44444444443 44566667777776554
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.85 E-value=2.1e-19 Score=180.29 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=172.0
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++++++.+.+.++...++... ...+..+...++++.+++++|.+ ++++++||++|+..++.++.+++|.
T Consensus 54 ~~~v~~~~~~~~~~~~~~~~~s~-~~~G~~~~~~~le~~ia~~~g~~---~~ii~~~~~~a~~~~~~~l~~~gd~----- 124 (393)
T TIGR01822 54 HPDLIQAAKDALDEHGFGMSSVR-FICGTQDIHKELEAKIAAFLGTE---DTILYASCFDANGGLFETLLGAEDA----- 124 (393)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcC-cccCChHHHHHHHHHHHHHhCCC---cEEEECchHHHHHHHHHHhCCCCCE-----
Confidence 78889988888876533332222 22344666778888999999873 4677789999999999888777766
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
|++++++|+++...++..+.+.+.++ ..|++++++++++ ++++|++++++||+|.+.++++|.++|
T Consensus 125 ---vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la 196 (393)
T TIGR01822 125 ---IISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLA 196 (393)
T ss_pred ---EEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHH
Confidence 99999999999999888887765543 3789999988874 788999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg 377 (435)
++||+++|+|++|+.+... ..|.+.. ..+. ..++|+++.|+||++.++ ..|++ +.++++.+........+
T Consensus 197 ~~~~~~li~De~~~~g~~~---~~~~~~~~~~~~-~~~~di~~~s~sK~l~g~-r~G~~-~~~~~~~~~l~~~~~~~--- 267 (393)
T TIGR01822 197 DKYDALVMVDECHATGFLG---PTGRGSHELCGV-MGRVDIITGTLGKALGGA-SGGFT-TARKEVVELLRQRSRPY--- 267 (393)
T ss_pred HHcCCEEEEECCccccCcC---CCCCchHHhcCC-CCCCeEEEEEChHHhhCC-CcEEE-EeCHHHHHHHHHhCccc---
Confidence 9999999999999643321 1111111 1222 236899999999995444 45874 45555544321111111
Q ss_pred CCCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhc
Q psy10210 378 NYGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l 426 (435)
...++.+...++++.++++.+. .+...+++++..+.+.+.++++
T Consensus 268 -----~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (393)
T TIGR01822 268 -----LFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA 312 (393)
T ss_pred -----eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 1123333333444555665542 2456666777777776666653
No 118
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=6.5e-20 Score=182.32 Aligned_cols=217 Identities=12% Similarity=-0.018 Sum_probs=158.4
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHH
Q psy10210 102 EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVI 181 (435)
Q Consensus 102 ~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 181 (435)
.+..+.|.. .+++.+.+.+.+.+..... ....| +..|.+++++++++++.+.... +
T Consensus 30 ~l~~~~~~~-~~~~~~~~al~~~l~~~~~----~~~~Y-~~~g~~~lr~aia~~~~~~~~~-~----------------- 85 (368)
T PRK03317 30 RLNTNENPY-PPSPALVADIAEAVAEAAA----GLNRY-PDRDAVALRADLAAYLTAQTGV-G----------------- 85 (368)
T ss_pred EecCCCCCC-CCCHHHHHHHHHHHhhhhh----hhccC-CCCchHHHHHHHHHHhhhhccC-C-----------------
Confidence 344455555 4556688888776553211 12223 3457888999999888764322 1
Q ss_pred HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210 182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD 261 (435)
Q Consensus 182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d 261 (435)
.++ +++++|+|+++++.+++.++.++++. |+++.|+|+.+...++..|.+++.+|.++++.+|
T Consensus 86 --------~~~-~~I~it~G~~~~l~~~~~~~~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d 148 (368)
T PRK03317 86 --------LTV-ENVWAANGSNEILQQLLQAFGGPGRT--------ALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLD 148 (368)
T ss_pred --------CCh-hhEEECCCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCC
Confidence 233 38999999999999999999888877 9999999999999999999999998877778899
Q ss_pred HHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCCccEE
Q psy10210 262 LAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPGVTSI 339 (435)
Q Consensus 262 ~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~gvd~~ 339 (435)
++++++++. .+++++++++|+||||.+-+.+++.++++.+++++|+||+|++|... |.. ...... ...-.++
T Consensus 149 ~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~-----~~~-~~~~~~~~~~~~i~ 222 (368)
T PRK03317 149 VDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRS-----GTP-SALTLLPEYPRLVV 222 (368)
T ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhccc-----CCc-CHHHHHHhCCCEEE
Confidence 999999987 47889999999999999999999999999999999999999987431 110 111111 1122345
Q ss_pred EecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 340 SVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 340 ~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
+.|+.|... +...+|+++ .++++.+.
T Consensus 223 ~~SfSK~~g~~GlRiG~~~-~~~~~~~~ 249 (368)
T PRK03317 223 SRTMSKAFAFAGGRLGYLA-AAPAVVDA 249 (368)
T ss_pred EEechhhhccchhhhhhhh-CCHHHHHH
Confidence 558999743 345678865 45555443
No 119
>PRK07179 hypothetical protein; Provisional
Probab=99.84 E-value=2.2e-19 Score=180.89 Aligned_cols=251 Identities=14% Similarity=0.056 Sum_probs=170.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++++++.+.+.++. .++.....+..-.....++.+.+++++|.+ .+++|+||++|+.++++++..+++.
T Consensus 69 ~~p~v~~a~~~~~~~~~-~~~~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~sG~~An~~~l~~l~~~g~~---- 140 (407)
T PRK07179 69 GHPDIIKAQIAALQEEG-DSLVMSAVFLHDDSPKPQFEKKLAAFTGFE---SCLLCQSGWAANVGLLQTIADPNTP---- 140 (407)
T ss_pred CCHHHHHHHHHHHHHhC-CCCCccccccCCchHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHhCCCCCE----
Confidence 58999999999998752 222211122222234455567888889874 4588999999999999998766655
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~ 302 (435)
|+++.+.|.+....++..|++++.++. .|++++++++++ ++++|++++++||+|.+.++++|.++|++||
T Consensus 141 ----v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~ 211 (407)
T PRK07179 141 ----VYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVDIAEEFG 211 (407)
T ss_pred ----EEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHHHHHHcC
Confidence 999999999998888888988765542 589999999976 5789999999999999999999999999999
Q ss_pred CcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCC
Q psy10210 303 IPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGS 381 (435)
Q Consensus 303 ~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~ 381 (435)
+++|+|++|+.+.. +..|.+.. .++.. .++|+++.|+||.+ ++. +|+++.+ +++.+.........
T Consensus 212 ~~livDea~~~g~~---g~~g~g~~~~~~~~-~~vdi~~~S~sK~~-g~~-~G~l~~~-~~~~~~~~~~~~~~------- 277 (407)
T PRK07179 212 CVLVVDESHSLGTH---GPQGAGLVAELGLT-SRVHFITASLAKAF-AGR-AGIITCP-RELAEYVPFVSYPA------- 277 (407)
T ss_pred CEEEEECcccccCc---CCCCCchHHhcCCC-CCCCEEEeechHhh-hcc-CeEEEeC-HHHHHHHHHhCcCe-------
Confidence 99999999975433 11121100 12221 35799999999985 553 6886654 45433321111110
Q ss_pred CccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210 382 PSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 382 ~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l 426 (435)
...++.....++++.++++.+.. +...+++++..+.+.+.++++
T Consensus 278 -~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~ 322 (407)
T PRK07179 278 -IFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL 322 (407)
T ss_pred -eeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 01123333444455556665533 245566777777777776665
No 120
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=2.3e-19 Score=177.16 Aligned_cols=163 Identities=17% Similarity=0.132 Sum_probs=129.2
Q ss_pred HHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHH
Q psy10210 185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAA 264 (435)
Q Consensus 185 a~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~ 264 (435)
+++++.+++ ++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.+|+++++.+|+++
T Consensus 69 a~~~~~~~~-~i~it~G~~~~l~~~~~~l~~~gd~--------Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 139 (351)
T PRK14807 69 ARYCSVVPT-NIFVGNGSDEIIHLIMLAFINKGDV--------VIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGS 139 (351)
T ss_pred HHHhCCCcc-cEEEecCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHH
Confidence 333344444 8999999999999999998877776 9999999999999999999999999998778899999
Q ss_pred HHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecC
Q psy10210 265 LQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDT 343 (435)
Q Consensus 265 l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~ 343 (435)
+++++++ ++++|++++|+||||.+-+.+++.++|++++.++++|++|.++. +....+. .....-.++..|+
T Consensus 140 l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-------~~~~~~~-~~~~~~vi~~~S~ 211 (351)
T PRK14807 140 FIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-------GNTIVDV-INEFENLIVLRTL 211 (351)
T ss_pred HHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-------ccchHHH-hhhCCCEEEEecc
Confidence 9999975 89999999999999999999999999999888999999998752 1111111 1111235677789
Q ss_pred CCCCC-ccCCcEEEEEeCCcccc
Q psy10210 344 HKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 344 hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
+|... ....+|+++ .++++.+
T Consensus 212 SK~~~~~GlRiG~~v-~~~~~~~ 233 (351)
T PRK14807 212 SKAFGLAGLRVGYAV-ANENILK 233 (351)
T ss_pred hHhcccchhceeeee-cCHHHHH
Confidence 99843 446789955 4555544
No 121
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.84 E-value=5.3e-19 Score=173.72 Aligned_cols=235 Identities=18% Similarity=0.107 Sum_probs=157.3
Q ss_pred hhHHHHHHHHHHHHHHHhCC-CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE
Q psy10210 171 PGVCKMEAEVIKMCARMFNG-GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV 249 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~-~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v 249 (435)
++..+++..+.+++...++. ....++++++|+|+++..++.++..+++. |++++++|.++..+++..|.++
T Consensus 36 ~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~--------vl~~~~~~~~~~~~~~~~~~~~ 107 (350)
T cd00609 36 PGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDE--------VLVPDPTYPGYEAAARLAGAEV 107 (350)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCE--------EEEcCCCchhHHHHHHHCCCEE
Confidence 33444444444444444332 12247999999999999999998766655 9999999999999999999999
Q ss_pred EEEecCCCccccH--HHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 250 KHIRLTSSYTVDL--AALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 250 ~~vp~~~~~~~d~--~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
+.+|.++++..+. +.+++.+++++++|++++++||+|.+.+ +++|.++|+++|+++|+|++|+++..... ..
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~---~~ 184 (350)
T cd00609 108 VPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGE---PP 184 (350)
T ss_pred EEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc---cc
Confidence 9999986666655 6777777789999999999999999965 55556899999999999999988765211 00
Q ss_pred CCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF 403 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~ 403 (435)
. ........+.|++..|+||+.+ ++.++|+++.+++++.+....... +. .++.+.....+....++..
T Consensus 185 ~-~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~l~~~ 253 (350)
T cd00609 185 P-ALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLP-YT---------TSGPSTLSQAAAAAALDDG 253 (350)
T ss_pred c-cccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHH-hc---------ccCCChHHHHHHHHHHhCc
Confidence 0 0123345567899999999865 456789977766455443211111 11 1122333333455555554
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 404 --GFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 404 --g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+.+...+++++..+.+.+.+++..
T Consensus 254 ~~~~~~~~~~~~~~~~~l~~~L~~~~ 279 (350)
T cd00609 254 EEHLEELRERYRRRRDALLEALKELG 279 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334445555555555655555543
No 122
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=1.4e-19 Score=179.05 Aligned_cols=156 Identities=19% Similarity=0.216 Sum_probs=123.3
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-cC
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-GN 272 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-~~ 272 (435)
+++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.+|+++++.+|++++++++. .+
T Consensus 82 ~~I~~t~G~~~~i~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~ 153 (356)
T PRK04870 82 ADVLLGNGSDELIQLLALACAKPGAT--------VLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHR 153 (356)
T ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCE--------EEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCC
Confidence 37999999999999999998877776 9999999999999999999999999998778899999999986 48
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCC
Q psy10210 273 TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKG 352 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g 352 (435)
++++++++|+||||.+-+.+++.++++..++++|+|++|..|... +. .+.. ....-.+++.|++|++..+..
T Consensus 154 ~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~-----~~-~~~~--~~~~~vi~~~S~SK~~~~GlR 225 (356)
T PRK04870 154 PALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGD-----SW-LPRL--ARFPNLLVMRTVSKLGLAGLR 225 (356)
T ss_pred CCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCc-----ch-HHHH--hhCCCEEEEecchhhhhHHHh
Confidence 899999999999999977777777777668899999999876421 10 0011 111235677789997544566
Q ss_pred cEEEEEeCCccccc
Q psy10210 353 SSVVLYRDLKYKHC 366 (435)
Q Consensus 353 ~g~il~~~~~~~~~ 366 (435)
+|+++ .++++.+.
T Consensus 226 iG~~i-~~~~~i~~ 238 (356)
T PRK04870 226 LGYLA-GHPAWIAE 238 (356)
T ss_pred hhhhh-CCHHHHHH
Confidence 89955 44555443
No 123
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.84 E-value=3.3e-20 Score=182.14 Aligned_cols=171 Identities=20% Similarity=0.193 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEE
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHI 252 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~v 252 (435)
...++++.+++++| + .++++++|||+++.+++.++.++++. |++++++|.++.. .+...|++++.+
T Consensus 33 ~~~~l~~~~a~~~g--~-~~~~~~~~gt~a~~~~~~~l~~~gd~--------v~~~~~~~~~~~~~~~~~~~~g~~~~~v 101 (338)
T cd06502 33 TTAKLEARAAELFG--K-EAALFVPSGTAANQLALAAHTQPGGS--------VICHETAHIYTDEAGAPEFLSGVKLLPV 101 (338)
T ss_pred HHHHHHHHHHHHhC--C-CeEEEecCchHHHHHHHHHhcCCCCe--------EEEecCcceeeecCCcHHHHcCceEEee
Confidence 34566678888888 3 37889999999999999998777666 9999999987543 345689999999
Q ss_pred ecCCCccccHHHHHHHhhc-------CceEEEEeCCCCCccc--ccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 253 RLTSSYTVDLAALQSAITG-------NTVMLVGSMPNFPYGT--MDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 253 p~~~~~~~d~~~l~~~i~~-------~~~~v~~~~p~nptG~--~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
|.+. +.+|++++++++++ ++++|++++|+||.|. .+++++|+++|++||+++|+|++|..+.... .|
T Consensus 102 ~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~---~~ 177 (338)
T cd06502 102 PGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAA---LG 177 (338)
T ss_pred cCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHh---cC
Confidence 9864 77999999999975 7899999999998553 3788999999999999999999986543311 12
Q ss_pred CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
. .......++|+++.++||++++| | |.+++.++++.+.
T Consensus 178 ~---~~~~~~~~~d~~~~s~sK~~~~~-~-g~~~~~~~~~~~~ 215 (338)
T cd06502 178 V---ALKTYKSGVDSVSFCLSKGGGAP-V-GAVVVGNRDFIAR 215 (338)
T ss_pred C---CHHHHHhcCCEEEEeccccCCCc-c-ceEEECCHHHHHH
Confidence 1 12222246799999999996545 4 3446666666544
No 124
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.84 E-value=1.2e-18 Score=171.24 Aligned_cols=327 Identities=19% Similarity=0.226 Sum_probs=193.3
Q ss_pred hhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCC
Q psy10210 70 RKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYY 144 (435)
Q Consensus 70 ~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g 144 (435)
|++|...+.++++|+.+. +++. +.++.... ..-...+|+. .++.++++.+.+...++.. .....+.+.|..
T Consensus 2 ryi~~t~~~~~~ML~~iG~~sieeL~~~~IP~~i~-~~~~~~lp~~-~sE~e~~r~~~~la~kN~~--~~~fiG~G~y~~ 77 (429)
T PF02347_consen 2 RYIPPTDEDIQEMLDAIGVKSIEELFDSDIPEEIR-LKKPLNLPEP-LSEYELLRHLERLASKNKS--YTSFIGAGSYTH 77 (429)
T ss_dssp ------HHHHHHHHHHCT-SSTGGGG-TTS-GGG--SS-----------HHHHHHHHHHHHTTS----TTS---CTTT--
T ss_pred CCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHhhc-CCCCCCCCCC-CCHHHHHHHHHHHHhcCCC--CCccccccccCc
Confidence 688998899999998875 3444 33333221 1123466765 8999999999999887654 234444444443
Q ss_pred -hHhHHHH-HHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 145 -QQDLVDL-LTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 145 -~~~l~~~-i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.|...+. +.+.-+-.....|++|+.+++..++..|...++++++|.+-. +.-+..|+|.+-..++.+.+....+
T Consensus 78 ~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdva-NaSlyd~atA~aEa~~ma~r~~~~~--- 153 (429)
T PF02347_consen 78 YVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVA-NASLYDGATAAAEAMLMAVRATKRK--- 153 (429)
T ss_dssp ---HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHHHHHHHHTT----
T ss_pred eeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCcc-CCCCCChhHHHHHHHHHHHHhcccC---
Confidence 5665555 554433322335999999999999999999999999999754 5677888887777776666543321
Q ss_pred CCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
+.+|+++...|+.+....+. .|++++.+|.++++..| ++++.+|++.+||+ .|.++++++|.+++
T Consensus 154 --~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~ 222 (429)
T PF02347_consen 154 --RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNPNT-FGVFEDIKEIADIA 222 (429)
T ss_dssp ----EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTEEEEEEESS-T-TSB--THHHHHHHH
T ss_pred --CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCeEEEEeecCCC-CceEeeHHHHHHHH
Confidence 45699999999998875544 58999999988777666 67899999999998 99998899999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC-----CccCCcEEEEEeCCcccccc----cc
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG-----FTPKGSSVVLYRDLKYKHCQ----YF 369 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~-----~~p~g~g~il~~~~~~~~~~----~~ 369 (435)
+++|..+++ .+- .. ..+.-.+| ...|+|+++.+ ||.+ +|++++|++.++++ +.+.. .-
T Consensus 223 h~~gal~~~-~ad--~~-----aL~~l~~P---ge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~lPGRiVG 289 (429)
T PF02347_consen 223 HAAGALVIV-GAD--PN-----ALGGLKSP---GEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQLPGRIVG 289 (429)
T ss_dssp HHTT-EEEE-CGG--CC-----GCCTC--G---GGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGGS-S-EEE
T ss_pred HHcCCEEEE-ecC--HH-----HHhCcCCh---hhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhhCCCceec
Confidence 999999887 431 10 01111122 34589999555 5543 34456899888876 33221 00
Q ss_pred ccCCCCCCCC----------------CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 370 VTSDWPGGNY----------------GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 370 ~~~~~~gg~~----------------~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
...|-.|... ++.++ ||-.+.....++..+..+|.+|+++..+++.+++.++.++|.++
T Consensus 290 ~t~D~~G~~~~~ltLqtREQHIrReKAtSNI-ctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T PF02347_consen 290 QTKDADGKRAFVLTLQTREQHIRREKATSNI-CTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI 364 (429)
T ss_dssp EEEBCCCSCCEEEE-GGGTCHHHGCCSTT----SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred ccccccccceeeeccccccccccccchhhhh-hhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122222110 01111 11111222356677889999999999999999999999998886
No 125
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=7.4e-20 Score=186.85 Aligned_cols=193 Identities=16% Similarity=0.146 Sum_probs=145.6
Q ss_pred cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH
Q psy10210 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD 215 (435)
Q Consensus 136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~ 215 (435)
...|..+.|.+++++++++++..+.... . ..++ ++|++|+|+++++.+++.++++
T Consensus 79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~-~-----------------------~v~~-~~Iiit~Ga~~al~~l~~~l~~ 133 (468)
T PLN02450 79 LALFQDYHGLPAFKNALAEFMSEIRGNK-V-----------------------TFDP-NKLVLTAGATSANETLMFCLAE 133 (468)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhhCCC-C-----------------------CcCh-HHeEEccChHHHHHHHHHHhCC
Confidence 3446677799999999999997643211 1 0133 3899999999999999999998
Q ss_pred HhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCcc
Q psy10210 216 YAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPYG 286 (435)
Q Consensus 216 ~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG 286 (435)
+++. |++++|+|+.+...+. ..|++++.+|++ +++.+|++++++++.+ +++++++++||||||
T Consensus 134 pGd~--------Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG 205 (468)
T PLN02450 134 PGDA--------FLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLG 205 (468)
T ss_pred CCCE--------EEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCC
Confidence 8887 9999999999988887 589999999985 5667888999988864 789999999999999
Q ss_pred cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC---------CCCCccEEEecCCCCCC-ccCCc
Q psy10210 287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF---------SLPGVTSISVDTHKYGF-TPKGS 353 (435)
Q Consensus 287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~---------~~~gvd~~~~s~hK~~~-~p~g~ 353 (435)
.+ +.+++|.++|++|++++|+||+|+.+.+. +. .+. ..... ....-.++..|+.|... ++..+
T Consensus 206 ~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~--~~-~~~-s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRi 281 (468)
T PLN02450 206 TTTTRTELNLLVDFITAKNIHLISDEIYSGTVFD--SP-GFV-SVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRV 281 (468)
T ss_pred cccCHHHHHHHHHHHHHCCcEEEEEccccccccC--CC-Ccc-cHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccE
Confidence 99 67889999999999999999999987542 00 000 00111 01223466778999743 55788
Q ss_pred EEEEEeCCcccc
Q psy10210 354 SVVLYRDLKYKH 365 (435)
Q Consensus 354 g~il~~~~~~~~ 365 (435)
|+++..++.+.+
T Consensus 282 G~li~~~~~l~~ 293 (468)
T PLN02450 282 GAIYSNDEMVVS 293 (468)
T ss_pred EEEEECCHHHHH
Confidence 997665444433
No 126
>PRK05839 hypothetical protein; Provisional
Probab=99.83 E-value=6.8e-19 Score=175.30 Aligned_cols=214 Identities=16% Similarity=0.061 Sum_probs=151.4
Q ss_pred CCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210 99 AGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA 178 (435)
Q Consensus 99 ~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~ 178 (435)
....+..+.|..+. ++.+.+.+.+.... ...|....|.+++++++++++...... .
T Consensus 25 ~~i~l~~~~p~~~~-~~~~~~a~~~~~~~--------~~~Y~~~~G~~~lr~aia~~l~~~~g~-~-------------- 80 (374)
T PRK05839 25 KGLDLTIGEPQFET-PKFIQDALKNNAHL--------LNKYPKSAGEESLREAQRGFFKRRFKI-E-------------- 80 (374)
T ss_pred CeEEcCCCCCCCCC-CHHHHHHHHHHhhc--------cCCCCCCCCCHHHHHHHHHHHHHHhCC-C--------------
Confidence 34555666676543 45666666554321 234556678999999999998764322 1
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH--HhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD--YAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~--~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~ 256 (435)
.++ +++++|+|+++++..++.++.. .++. |++++|+|+.+...++..|++++.+|++.
T Consensus 81 -----------~~~-~~I~it~G~~~al~~~~~~~~~~~~gd~--------vlv~~P~y~~~~~~~~~~g~~v~~v~~~~ 140 (374)
T PRK05839 81 -----------LKE-NELIPTFGTREVLFNFPQFVLFDKQNPT--------IAYPNPFYQIYEGAAIASRAKVLLMPLTK 140 (374)
T ss_pred -----------CCc-ceEEEecCcHHHHHHHHHHHhcCCCCCE--------EEECCCCchhhHHHHHhcCCEEEEeeccc
Confidence 133 4899999999999999888752 4454 99999999999999999999999999973
Q ss_pred --CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CC
Q psy10210 257 --SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FD 330 (435)
Q Consensus 257 --~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d 330 (435)
++.+|+++.+ + +++++|++++||||||.+ +.+++|+++|++||+++++||+|+.+... + ..+. .+
T Consensus 141 ~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~-----~-~~~s~~~ 211 (374)
T PRK05839 141 ENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYEN-----T-PPPSLLE 211 (374)
T ss_pred ccCCcCCcchhh--h-ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccC-----C-CCCCHhh
Confidence 3555554432 2 468999999999999999 67889999999999999999999986421 0 1111 11
Q ss_pred C------CCCCccEEEecCCCC-CCccCCcEEEEEeCCccccc
Q psy10210 331 F------SLPGVTSISVDTHKY-GFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 331 ~------~~~gvd~~~~s~hK~-~~~p~g~g~il~~~~~~~~~ 366 (435)
. ...+-.+++.|+.|. +.+...+|+++. ++++.+.
T Consensus 212 ~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~-~~~~~~~ 253 (374)
T PRK05839 212 ASILVGNESFKNVLVINSISKRSSAPGLRSGFIAG-DASILKK 253 (374)
T ss_pred hhcccCccccCcEEEEeccccccCCccceeEEEec-CHHHHHH
Confidence 1 011234667789995 566688999665 4555443
No 127
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.83 E-value=2.1e-19 Score=180.41 Aligned_cols=214 Identities=12% Similarity=0.077 Sum_probs=151.8
Q ss_pred CCccccCCCCC--CCCH--HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHH
Q psy10210 100 GLEYFLELPSQ--GRNR--LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCK 175 (435)
Q Consensus 100 ~~~~~~~~P~~--~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (435)
.+++..+.|.. ...| +.+.+.+.+..... ....|.+..|.+++|+++++++...... .
T Consensus 28 ~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~------~~~~Y~~~~G~~~lR~aia~~~~~~~~~-~----------- 89 (396)
T PRK09257 28 KVNLGVGVYKDEQGRTPVLRAVKKAEARLLETE------TTKNYLPIEGLAAYRQAVQELLFGADSP-A----------- 89 (396)
T ss_pred cEecceeeEECCCCCEeccHHHHHHHHHhcccc------cCCCcCCCCCCHHHHHHHHHHhcCCCCc-c-----------
Confidence 35566665411 1223 55666666544321 2345777889999999999998653211 0
Q ss_pred HHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHH--HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEE
Q psy10210 176 MEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYR--DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKH 251 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~--~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~ 251 (435)
.++ +++ ++|+|+++|+.++++++. ++|+. |++++|+|+.+...++..|++++.
T Consensus 90 --------------~~~-~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~--------Vlv~~P~y~~~~~~~~~~g~~~v~ 146 (396)
T PRK09257 90 --------------LAA-GRVATVQTPGGTGALRVGADFLKRAFPDAK--------VWVSDPTWPNHRAIFEAAGLEVKT 146 (396)
T ss_pred --------------ccc-CeEEEEecCCccHHHHHHHHHHHHhCCCCe--------EEECCCCcccHHHHHHHcCCcEEE
Confidence 122 255 999999999999997763 57776 999999999999999999999999
Q ss_pred Eec-C-CCccccHHHHHHHhh---cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 252 IRL-T-SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 252 vp~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
+|+ + +++.+|++++++++. ++++++++++||||||.+ +.+++|+++|++||+++++|++|.++.... +.
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~-- 223 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGL-EE-- 223 (396)
T ss_pred EeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccch-HH--
Confidence 998 3 457899999999876 346777779999999999 778999999999999999999998875310 00
Q ss_pred CCCCCC-CCCC-CCccEEEecCCCCCCc-cCCcEEEEE
Q psy10210 324 YPLPPF-DFSL-PGVTSISVDTHKYGFT-PKGSSVVLY 358 (435)
Q Consensus 324 ~~~~~~-d~~~-~gvd~~~~s~hK~~~~-p~g~g~il~ 358 (435)
...++ .+.. ..-.+++.|+.|.... ...+|++++
T Consensus 224 -~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 224 -DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred -HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 00011 1111 1124667789998432 466899764
No 128
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.83 E-value=3.2e-19 Score=175.85 Aligned_cols=170 Identities=17% Similarity=0.172 Sum_probs=132.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~ 258 (435)
++++.+++++|.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++++
T Consensus 58 ~lr~~ia~~~~~~~~-~i~~~~G~~~~l~~~~~~l~~~gd~--------v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 128 (346)
T TIGR01141 58 ELKQALADYYGVDPE-QILLGNGSDEIIELLIRAFLEPGDA--------VLVPPPTYSMYEISAKIHGAEVVKVPLDEDG 128 (346)
T ss_pred HHHHHHHHHhCcChH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCCHHHHHHHHHHcCCeEEEeccCCCC
Confidence 455666667766554 8999999999999999888766655 9999999999998999999999999998778
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCC-CCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g 335 (435)
.+|++++++++++++++|++++|+||||.+.+++++.++|+.+ ++++++|++|+.+... + .+.+.. ...
T Consensus 129 ~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~-----~---~~~~~~~~~~ 200 (346)
T TIGR01141 129 QLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE-----P---STLPLLAEYP 200 (346)
T ss_pred CCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC-----c---cHHHHHhhCC
Confidence 8999999999888999999999999999999999999998877 9999999999865321 0 011111 112
Q ss_pred ccEEEecCCCCCCc-cCCcEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGFT-PKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~ 366 (435)
.+++..|++|++.. +.++|+++. ++++.+.
T Consensus 201 ~~i~~~S~sK~~g~~G~r~G~~~~-~~~~~~~ 231 (346)
T TIGR01141 201 NLIVLRTLSKAFGLAGLRIGYAIA-NAEIIDA 231 (346)
T ss_pred CEEEEehhhHhhhchhhhceeeec-CHHHHHH
Confidence 35667788999522 345799665 4555443
No 129
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.83 E-value=2.7e-18 Score=185.92 Aligned_cols=325 Identities=15% Similarity=0.121 Sum_probs=213.0
Q ss_pred hhhchhhHHHHHHHHHHHH----HHHHhh-hhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC
Q psy10210 69 ARKIPAVRKKLEEETGKVA----KLFQDD-IKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY 143 (435)
Q Consensus 69 ~~~lp~~~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (435)
.|++|...+.+++||+.+. +++.+. ++... ...-..++|+. .++.++++.+.+...++.. + ....+.+.|.
T Consensus 12 ~~~i~~~~~~~~~ml~~~g~~s~~~l~~~~iP~~i-~~~~~l~lp~~-~sE~e~~~~~~~la~~N~~-~-~~~ig~G~y~ 87 (954)
T PRK05367 12 RRHIGPSAADQQAMLAALGADSLDALIDQAVPASI-RLAEPLDLPAA-LSEAEALAELRAIASKNKV-F-RSYIGQGYYG 87 (954)
T ss_pred ccCCCcCHHHHHHHHHhcCCCCHHHHhhhhCCHHH-hcCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-C-CcccCCCCCC
Confidence 5788988888999888664 455554 33221 11123467764 8999999999998887543 2 1233333332
Q ss_pred -ChHh-HHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210 144 -YQQD-LVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK 221 (435)
Q Consensus 144 -g~~~-l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~ 221 (435)
-.|. +.+.+.+.-+-+....|++++.+++..+...+.++++++++|++.. ++.++.++|.+...++.+.+-...
T Consensus 88 ~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~a-naSl~d~aTAa~ea~~~a~~~~~~--- 163 (954)
T PRK05367 88 THTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIA-NASLLDEATAAAEAMALAKRVSKS--- 163 (954)
T ss_pred CcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChh-hccccccHHHHHHHHHHhhhhccC---
Confidence 2555 4355554322222336999999999999999999999999999876 899999999999988877642211
Q ss_pred CCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210 222 GISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297 (435)
Q Consensus 222 g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l 297 (435)
++++|++++..|++.... ++..|++++.+|.+.+ ++ ++++.++++.+|++ +|.+.|+++|+++
T Consensus 164 --~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~~~~~~vlvq~p~~-~G~i~d~~~i~~~ 230 (954)
T PRK05367 164 --KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------HDDVFGVLLQYPGT-SGEVRDYTALIAA 230 (954)
T ss_pred --CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------cccEEEEEEecCCC-CeeeccHHHHHHH
Confidence 035699999999996654 4667999999997542 11 34677777777755 9999999999999
Q ss_pred HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC-----CcEEEEEeCCccccccccccC
Q psy10210 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK-----GSSVVLYRDLKYKHCQYFVTS 372 (435)
Q Consensus 298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~-----g~g~il~~~~~~~~~~~~~~~ 372 (435)
|+++|+++++|+.+..... ..+....|+|+++.++|||| .|. ++|++.++++ +.+.......
T Consensus 231 ah~~Gal~~vda~~~Al~~-----------l~~pge~GaDi~vgs~qkfg-~P~g~GGP~aGflavr~~-~~r~lpgriv 297 (954)
T PRK05367 231 AHARGALVAVAADLLALTL-----------LTPPGEMGADIAVGSAQRFG-VPMGFGGPHAAYFAVRDA-YKRSMPGRIV 297 (954)
T ss_pred HHHcCCEEEEEehhhhccC-----------CCChhhcCCCEEEeeCcccC-CCCCCCCCCEEEEEECHH-HHhhCCCCee
Confidence 9999999999996633322 12456779999999999994 443 5999888764 3332211111
Q ss_pred CC----CCCC-CC----C-----CccccCCCch---HHHHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 373 DW----PGGN-YG----S-----PSVSGSRSGG---IIATCWA--AMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 373 ~~----~gg~-~~----~-----~~~~gsr~~~---~ia~~~a--~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
.| .|.. |. + .-..++.+.. .+.+..+ .+.++|.+|+.+..+++...+.++.++|.
T Consensus 298 G~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~ 371 (954)
T PRK05367 298 GVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLR 371 (954)
T ss_pred eeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22 1211 10 0 0000111111 1112222 24667888888877777777666666554
No 130
>PRK09105 putative aminotransferase; Provisional
Probab=99.83 E-value=6.9e-19 Score=174.86 Aligned_cols=169 Identities=17% Similarity=0.089 Sum_probs=128.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~ 257 (435)
.++++.+++.+|.+++ +|++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|.+++
T Consensus 81 ~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~~~~~l~~~gd~--------Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~ 151 (370)
T PRK09105 81 DDLRTLFAAQEGLPAD-HVMAYAGSSEPLNYAVLAFTSPTAG--------LVTADPTYEAGWRAADAQGAPVAKVPLRAD 151 (370)
T ss_pred HHHHHHHHHHhCcChh-hEEEcCChHHHHHHHHHHHcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEecCCCC
Confidence 3455556666676665 8999999999999999999877776 999999999999999999999999999877
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
+.+|++++++. .++++++++++||||||.+-+.+++.++++. +++++++||+|..|.. + ....++....
T Consensus 152 ~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~------~--~s~~~~~~~~ 222 (370)
T PRK09105 152 GAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD------A--PSVVDLVAQR 222 (370)
T ss_pred CCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc------C--cchHHHHhhC
Confidence 88999999877 5678999999999999999777777766653 4899999999976531 0 0112222223
Q ss_pred cc-EEEecCCCCCCcc--CCcEEEEEeCCccccc
Q psy10210 336 VT-SISVDTHKYGFTP--KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd-~~~~s~hK~~~~p--~g~g~il~~~~~~~~~ 366 (435)
.+ ++..|++|. +|. ..+|+++ .++++.+.
T Consensus 223 ~~vi~~~SfSK~-~g~~GlRiG~~v-~~~~~i~~ 254 (370)
T PRK09105 223 KDLIVLRTFSKL-YGMAGMRLGLAA-ARPDLLAK 254 (370)
T ss_pred CCEEEEecccHh-hcCCccceeeee-cCHHHHHH
Confidence 34 444578898 444 4489966 44555443
No 131
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=2.3e-19 Score=181.96 Aligned_cols=223 Identities=13% Similarity=0.075 Sum_probs=157.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhCCC---CC--CCCCcccccccCChHhHHHHHHHHHHhhcCCC-CCCCCcChhHHHHHHH
Q psy10210 106 ELPSQGRNRLEILELVSNYLARGH---YD--WKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTN-PLHPDIFPGVCKMEAE 179 (435)
Q Consensus 106 ~~P~~~~~~~~i~~~~~~~~~~~~---~~--~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~-~~~~~~~~~~~~~e~~ 179 (435)
+.-++.+..+++.+.+.+...... .. -......|..+.|.+++|+++++.+.++.... ++
T Consensus 53 ~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v-------------- 118 (447)
T PLN02607 53 GLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARF-------------- 118 (447)
T ss_pred echhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCc--------------
Confidence 445555666677776665432110 00 01112335567789999999999998753221 11
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC--C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT--S 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~--~ 256 (435)
++ +++++|+|+++++.+++.+++++++. |++++|.|+.+...+. ..|++++.|+++ +
T Consensus 119 -----------~p-~~Ivit~G~t~al~~l~~~l~~pGD~--------Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~ 178 (447)
T PLN02607 119 -----------DP-DRIVLTAGATAANELLTFILADPGDA--------LLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSN 178 (447)
T ss_pred -----------CH-HHeEEcCChHHHHHHHHHHhCCCCCE--------EEEcCCCCcchHHHHHhcCCcEEEEEeCCCCC
Confidence 33 38999999999999999999988887 9999999999988776 579999999986 3
Q ss_pred CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC-
Q psy10210 257 SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL- 326 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~- 326 (435)
++.+|++++++++.+ +++++++++|+||||.+ +.+++|.++|++|++++|+||+|+.+++. + ..+..
T Consensus 179 ~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~--~-~~f~S~ 255 (447)
T PLN02607 179 NFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFS--A-SEFVSV 255 (447)
T ss_pred CCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccC--C-CCcccH
Confidence 467899999998864 78999999999999999 56899999999999999999999886542 0 00000
Q ss_pred CC----CCCCC-CCccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 327 PP----FDFSL-PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 327 ~~----~d~~~-~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.. .+... ..-..+..|+.|..+ .+..+|+++..++.+..
T Consensus 256 ~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~ 300 (447)
T PLN02607 256 AEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVT 300 (447)
T ss_pred HHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHH
Confidence 00 00001 122355678899743 45778997765655543
No 132
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=8.9e-19 Score=173.19 Aligned_cols=167 Identities=16% Similarity=0.159 Sum_probs=124.7
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--Cccc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTV 260 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~ 260 (435)
.+++.++.+++ ++++|+|+++++.+++.++ .+ +. |++++|+|+.+...++..|++++.+|++. ++.+
T Consensus 62 ~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~~-~~-~~--------v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 130 (354)
T PRK06358 62 RIASFEQLDLE-NVILGNGATELIFNIVKVT-KP-KK--------VLILAPTFAEYERALKAFDAEIEYAELTEETNFAA 130 (354)
T ss_pred HHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CC-Cc--------EEEecCChHHHHHHHHHcCCeeEEEeCccccCCCc
Confidence 33333444554 8999999999999999886 22 34 99999999999999999999999999873 4578
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV 336 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv 336 (435)
| +++.+.+.++++++++++||||||.+ +.+++|.++|++|++++++|++|..|... +...+.+.. ....-
T Consensus 131 d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~-----~~~~~~~~~~~~~~~ 204 (354)
T PRK06358 131 N-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEE-----NETISMINYLENFKN 204 (354)
T ss_pred c-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCC-----ccchhHHHhccCCCC
Confidence 8 66666667789999999999999999 56899999999999999999999887642 111111111 11122
Q ss_pred cEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
.++..|+.|..+ +...+|+++..++.+.+.
T Consensus 205 vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~ 235 (354)
T PRK06358 205 LIIIRAFTKFFAIPGLRLGYGLTSNKNLAEK 235 (354)
T ss_pred EEEEEechhhccCcchhheeeecCCHHHHHH
Confidence 466678999854 457789977666555433
No 133
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=5.2e-19 Score=176.17 Aligned_cols=214 Identities=14% Similarity=0.041 Sum_probs=149.1
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+..+.|.. .+++.+.+.+.+.+.... . ...| +..|.+++++++++++.+.... ..
T Consensus 33 l~~~~~~~-~~~~~~~~~~~~~~~~~~-~----~~~Y-~~~G~~~Lr~aia~~~~~~~~~-~~----------------- 87 (374)
T PRK02610 33 LDTNEFPY-DLPPDLKQKLAWLYQQGI-E----SNRY-PDGGHEALKQAIAEYVNESAAG-SS----------------- 87 (374)
T ss_pred ecCCCCCC-CCCHHHHHHHHHHHhhcc-c----ccCC-CCCchHHHHHHHHHHhCccccc-cC-----------------
Confidence 44455655 344577888877655321 0 1123 3458899999999988764210 00
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Ccccc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYTVD 261 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~~d 261 (435)
..++ +++++|+|+++++.+++.++..+++. +|++++|+|+.+...++..|++++.+|+++ ++.+|
T Consensus 88 ------~v~~-~~I~it~Ga~~al~~~~~~~~~~g~~-------~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d 153 (374)
T PRK02610 88 ------QITP-ANISVGNGSDELIRSLLIATCLGGEG-------SILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEID 153 (374)
T ss_pred ------CCCH-HHEEEcCChHHHHHHHHHHHcCCCCC-------eEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCC
Confidence 0233 38999999999999888877655541 399999999999999999999999999874 57899
Q ss_pred HHHHHHHhh----cCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 262 LAALQSAIT----GNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 262 ~~~l~~~i~----~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
++++++++. .+++++++++||||||.+-+ +++|.++| +++++|+|++|..|... . ....+. ..
T Consensus 154 ~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~-----~-~~~~~~--~~ 223 (374)
T PRK02610 154 LAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT-----T-LVGELA--QH 223 (374)
T ss_pred HHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc-----c-hHHHHh--cC
Confidence 999999886 47899999999999999944 45555544 48999999999877421 0 000111 11
Q ss_pred CccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
.-.++..|+.|.. .+...+|+++ .++++.+.
T Consensus 224 ~~~ivi~SfSK~~g~~GlRiG~~v-~~~~l~~~ 255 (374)
T PRK02610 224 PNWVILRTFSKAFRLAAHRVGYAI-GHPELIAV 255 (374)
T ss_pred CCEEEEEecchhccCcccceeeee-cCHHHHHH
Confidence 1135667899985 3457789965 45555443
No 134
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.82 E-value=1.8e-19 Score=178.66 Aligned_cols=161 Identities=16% Similarity=0.116 Sum_probs=121.0
Q ss_pred CCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHH
Q psy10210 189 NGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSA 268 (435)
Q Consensus 189 g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~ 268 (435)
|.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++ ++.+|+++++++
T Consensus 78 ~~~~~-~I~vt~Gs~e~i~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~ 147 (366)
T PRK01533 78 HVKME-QVLCGSGLDEVIQIISRAVLKAGDN--------IVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSV 147 (366)
T ss_pred CCCcc-eEEECCCHHHHHHHHHHHhcCCCCE--------EEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHH
Confidence 34444 8999999999999999999877776 9999999999999999999999999986 456999999999
Q ss_pred hhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCccEEEecCC
Q psy10210 269 ITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGVTSISVDTH 344 (435)
Q Consensus 269 i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gvd~~~~s~h 344 (435)
++++++++++++||||||.+-+ +++|+++|++++ ++++||+|..|... + +.. ..... ...+-.+++.|+.
T Consensus 148 ~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~--~--~~~-~~~~~~~~~~~vi~~~SfS 221 (366)
T PRK01533 148 VDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTA--K--DFP-ETLPLLEKHKNILVLRTFS 221 (366)
T ss_pred hCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc--c--cCc-chhHHhccCCCEEEEeCch
Confidence 9889999999999999999955 555555555655 67889999876531 0 000 01111 1122356777899
Q ss_pred CCCC-ccCCcEEEEEeCCccccc
Q psy10210 345 KYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 345 K~~~-~p~g~g~il~~~~~~~~~ 366 (435)
|... ++..+|+++ .++++.+.
T Consensus 222 K~~~l~GlRiG~~i-~~~~~~~~ 243 (366)
T PRK01533 222 KAYGLASFRVGYAV-GHEELIEK 243 (366)
T ss_pred HHhcChHHHHhHHh-CCHHHHHH
Confidence 9843 446689855 45665543
No 135
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=5.4e-18 Score=182.81 Aligned_cols=261 Identities=14% Similarity=0.155 Sum_probs=187.1
Q ss_pred hhhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCC--CCCCHHHHHHHHHHHHhCCCCCCCCCcccccc
Q psy10210 69 ARKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPS--QGRNRLEILELVSNYLARGHYDWKHGRVSGAV 141 (435)
Q Consensus 69 ~~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 141 (435)
.|++|...+.+++||+.+. +++. +.++... ... ...+|+ .+.++.++++.+.+...++.. +. .+.+.+.
T Consensus 37 ~r~i~~~~~~~~~ML~~ig~~s~d~l~~~~iP~~i-~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~-~~-~fiG~G~ 112 (993)
T PLN02414 37 RRHNSATPEEQKAMAEYCGFDSLDALIDATVPKSI-RLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV-FK-SYIGMGY 112 (993)
T ss_pred hccCCcCHHHHHHHHHhcCccCHHHHhhccCCHHH-hcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc-cc-cccCCCC
Confidence 5899999899999998664 4555 3333322 111 346772 458999999999998876543 22 1222222
Q ss_pred cC--ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh
Q psy10210 142 YY--YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE 219 (435)
Q Consensus 142 ~~--g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~ 219 (435)
|. -++.+.+.+.+..+.+....|++++.+++..+...+.+.++++++|++.. ++.++.++|.+...++.+.+-.
T Consensus 113 y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~a-naSL~d~aTAaaea~~~a~~~~--- 188 (993)
T PLN02414 113 YNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMS-NASLLDEGTAAAEAMAMCNNIL--- 188 (993)
T ss_pred CCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChh-hEeecCChHHHHHHHHHHHhcc---
Confidence 22 24455477777665444446999999999999999999999999999876 8999999999999888776421
Q ss_pred hcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHH
Q psy10210 220 EKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIA 295 (435)
Q Consensus 220 ~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~ 295 (435)
+| ++++|++++..|++....+ +..|++++.+|.+.. + ...+.+..+++..|++ +|.+.|+++|+
T Consensus 189 -~g-~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~~~v~~vlvq~P~~-~G~v~dv~~I~ 256 (993)
T PLN02414 189 -KG-KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSSGDVCGVLVQYPAT-DGEVLDYAEFV 256 (993)
T ss_pred -cC-CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------cccCceEEEEEecCCC-CeEEcCHHHHH
Confidence 11 2356999999999976554 456999999987431 1 1123456666667665 99999999999
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccCC-----cEEEEEeCCc
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPKG-----SSVVLYRDLK 362 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~g-----~g~il~~~~~ 362 (435)
++|+++|+++++ +|..-... ++ +....|+|+++.++|||| +|.| +|++.++++-
T Consensus 257 ~~ah~~GaL~iV-aad~lal~-----------~l~~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~ 316 (993)
T PLN02414 257 KNAHANGVKVVM-ATDLLALT-----------MLKPPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY 316 (993)
T ss_pred HHHHHcCCEEEE-EECHHHhc-----------CCCCHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHH
Confidence 999999999999 55432221 23 356679999999999997 5544 7997777653
No 136
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.82 E-value=3.9e-18 Score=162.80 Aligned_cols=300 Identities=17% Similarity=0.199 Sum_probs=218.6
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCCCCCCccc-c-cccCChHhHHHHHHHHHHhhcCCCCCCCCc-ChhHHHHHHHHHHH
Q psy10210 107 LPSQGRNRLEILELVSNYLARGHYDWKHGRVS-G-AVYYYQQDLVDLLTEVFGLTSYTNPLHPDI-FPGVCKMEAEVIKM 183 (435)
Q Consensus 107 ~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ 183 (435)
.|....++.++++.+.+..+++.. -..+... | +...-+|.+....+ .+..+...+|++|+. .++..++..++.+|
T Consensus 40 ~~~Pe~SE~e~~Rh~~rLs~kn~a-vd~~m~PLGSCTMK~Np~~e~~~~-~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~ 117 (496)
T COG1003 40 PPLPEHSETEMVRHYTRLSQKDLA-VDRGMIPLGSCTMKLNPKAEMKPA-TWPEFANIHPFQPEEQVQGYLELIYELQEW 117 (496)
T ss_pred CCCccccHHHHHHHHHHHHhcccc-cccCccCCcccccccCchhhcccc-cccchhhcCCCCChHHHHHHHHHHHHHHHH
Confidence 344447889999999888776421 1112111 1 11112444433333 344566678888866 48999999999999
Q ss_pred HHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcccc
Q psy10210 184 CARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVD 261 (435)
Q Consensus 184 la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d 261 (435)
++++.|.+. +.+. +.|.++=...+.+++.+... +|. .+.++++|+.+|......|.+.|.+|+.|+++++|.+|
T Consensus 118 L~~ITG~Da---vsLQP~AGAqGE~aGll~Ir~YHe~-rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~VD 193 (496)
T COG1003 118 LKEITGMDA---VSLQPNAGAQGEYAGLLAIRAYHES-RGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGNVD 193 (496)
T ss_pred HHHhcCCce---eeccCCCCcchhhHHHHHHHHHHHH-cCCCcCcEEEeeccccCCChhhHhhcCceEEEEecCCCCCcc
Confidence 999999964 3444 56788888888888877766 554 67889999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 262 LAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 262 ~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
+++|+++..+++.++.+++||+ .|.. ++|.+|+++.+++|..|..|.+---.+. | .....+.|.|++-
T Consensus 194 lddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~v------G----~~rPGd~G~DV~H 262 (496)
T COG1003 194 LDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIV------G----LARPGDMGFDVVH 262 (496)
T ss_pred HHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhh------c----cccccccccceEE
Confidence 9999999999999999999988 8999 7899999999999999999998533222 2 2334456899999
Q ss_pred ecCCCCCCcc-----CCcEEEEEeCCccccccccccCC----CCCCCC----CCC-ccccC----CCchHHHHHHHHHHH
Q psy10210 341 VDTHKYGFTP-----KGSSVVLYRDLKYKHCQYFVTSD----WPGGNY----GSP-SVSGS----RSGGIIATCWAAMMY 402 (435)
Q Consensus 341 ~s~hK~~~~p-----~g~g~il~~~~~~~~~~~~~~~~----~~gg~~----~~~-~~~gs----r~~~~ia~~~a~l~~ 402 (435)
++.||++..| +|+|-|.++. .+... .|. ..++.| ... ++.-+ -++..+..+|+.++.
T Consensus 263 lNLHKTF~iPHGGGGPG~GPvgVk~-~L~pf----LP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~ 337 (496)
T COG1003 263 LNLHKTFCIPHGGGGPGAGPVGVKA-HLAPF----LPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRM 337 (496)
T ss_pred eecccccccCCCCCCCCCCceehHh-hcccc----CCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHH
Confidence 9999985444 5677766663 33322 111 122221 111 11111 123456789999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+|.+|+++..+.-.-++.+..++|++
T Consensus 338 mG~~GL~~ase~AvLNANYia~rL~~ 363 (496)
T COG1003 338 MGADGLKQASEVAVLNANYIARRLKG 363 (496)
T ss_pred HhHHHHHHHHHHHHHhHHHHHHHhhh
Confidence 99999999999888888888888775
No 137
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.82 E-value=2.8e-19 Score=156.91 Aligned_cols=164 Identities=21% Similarity=0.217 Sum_probs=132.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH-HHHHHcCCEEEEEecCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD-KAANYFGMKVKHIRLTS 256 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~-~~~~~~g~~v~~vp~~~ 256 (435)
.++++.++++++.+. +++++++|||+|+.+++++++.+++. |+++++.|++.. ..+...|++++.++.+.
T Consensus 3 ~~~~~~l~~~~~~~~-~~~~~~~~~t~a~~~~~~~~~~~~~~--------v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 73 (170)
T cd01494 3 EELEEKLARLLQPGN-DKAVFVPSGTGANEAALLALLGPGDE--------VIVDANGHGSRYWVAAELAGAKPVPVPVDD 73 (170)
T ss_pred HHHHHHHHHHcCCCC-CcEEEeCCcHHHHHHHHHHhCCCCCE--------EEEeecccceehhhHHHhcCCEEEEeccCC
Confidence 467788999997443 47899999999999999998765444 999999999988 88899999999999875
Q ss_pred CccccH--HHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 257 SYTVDL--AALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 257 ~~~~d~--~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
++..+. +.+++.. .++++++++++++|++|...++++|.++|+++|+++|+|++|+++..... ..+...
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~--------~~~~~~ 145 (170)
T cd01494 74 AGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAP--------GVLIPE 145 (170)
T ss_pred CCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccccc--------cccccc
Confidence 443333 3554433 46889999999999999999999999999999999999999998766321 134445
Q ss_pred CCccEEEecCCCCCCccCCcEEEEEe
Q psy10210 334 PGVTSISVDTHKYGFTPKGSSVVLYR 359 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g~g~il~~ 359 (435)
.++|+++.|+||++.+ .|+|++++|
T Consensus 146 ~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 146 GGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccCCEEEEEcccccCC-CceEEEEeC
Confidence 6799999999999644 789997764
No 138
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.82 E-value=8.1e-19 Score=173.64 Aligned_cols=168 Identities=17% Similarity=0.160 Sum_probs=123.6
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--S 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~ 257 (435)
+++.+++.++.+++ ++++|+|+++++.+++.++ .++ . +++.+|+|..+...++..|++++.+|+++ +
T Consensus 60 lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~~~~l-~~g-~--------viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 128 (356)
T PRK08056 60 LHQALARHHQVPAS-WILAGNGETESIFAVVSGL-KPR-R--------AMIVTPGFAEYRRALQQVGCEIRRYSLREADG 128 (356)
T ss_pred HHHHHHHHhCcChh-hEEECCCHHHHHHHHHHHh-CCC-C--------EEEeCCCcHHHHHHHHHcCCeEEEEecccccC
Confidence 33344444444554 8999999999999999876 332 3 78889999999999999999999999863 3
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+.+| +++.+.+.++++++++++||||||.+-+ +++|+++|+++++++++|++|.+|... +....+. +...
T Consensus 129 ~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~-~~~~ 201 (356)
T PRK08056 129 WQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPD-----ETGFIPQ-LADN 201 (356)
T ss_pred CCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCc-----chHHHHH-hccC
Confidence 4555 4566667788999999999999999955 888999999999999999999887531 1000011 1122
Q ss_pred CccEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
..++++.|++|+.. ....+|+++..++++.+
T Consensus 202 ~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~ 233 (356)
T PRK08056 202 PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA 233 (356)
T ss_pred CCEEEEEechhhccCcchhheeeecCCHHHHH
Confidence 35678889999854 33678997765555543
No 139
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=7.6e-19 Score=174.09 Aligned_cols=170 Identities=16% Similarity=0.074 Sum_probs=129.3
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.++++++.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...+...|++++.+|++ ++.
T Consensus 69 lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~--------v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~ 138 (359)
T PRK03158 69 LRTKVAKHLGVDEE-QLLFGAGLDEVIQMISRALLNPGTN--------TVMAEPTFSQYRHNAIIEGAEVREVPLK-DGG 138 (359)
T ss_pred HHHHHHHHhCCCHH-HEEECCCHHHHHHHHHHHHhCCCCE--------EEEcCCCHHHHHHHHHHcCCeEEEEecC-CCC
Confidence 33444444455543 8999999999999999998777766 9999999999999999999999999997 577
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCC-CCCCc
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPGV 336 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~gv 336 (435)
+|+++++++++++++++++++|+||||.+-+.+++.++++. +|+++|+||+|..+... +.....+.. ...+.
T Consensus 139 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~ 213 (359)
T PRK03158 139 HDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTA-----EDYPDTLPLLEKYEN 213 (359)
T ss_pred cCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCC-----cccccHHHHHHhcCC
Confidence 99999999998899999999999999999888888888876 59999999999887541 100001111 11234
Q ss_pred cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.++..|+.|..+ ....+|+++. ++++.+
T Consensus 214 vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~ 242 (359)
T PRK03158 214 LIVLRTFSKAYGLAALRVGYGIA-SEELIE 242 (359)
T ss_pred EEEEEechHhhcCcchhhehhcC-CHHHHH
Confidence 567778999842 2355699654 455544
No 140
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.2e-18 Score=177.89 Aligned_cols=209 Identities=16% Similarity=0.115 Sum_probs=148.3
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+..+.|+. .+|+.+.+ +.+.+. +. .|.+..|.+++++++++.+..........+
T Consensus 105 l~~g~p~~-~~~~~v~e-~~~~~~-~~--------~Y~~~~g~~~lreaia~~~~~~~~~~~~~~--------------- 158 (527)
T PRK09275 105 YVRDQLGF-DADEFVYE-LVDGII-GD--------NYPVPDRMLKHTEKIVKDYLRQEMCGGRPP--------------- 158 (527)
T ss_pred hcCCCCCC-CCCHHHHH-HHHHHh-cC--------CCCCCCCCHHHHHHHHHHHHHhhccCCCCC---------------
Confidence 44566765 33555666 444443 21 366778999999999986654211111100
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHH-----HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC--EEEEEecC
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKA-----YRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM--KVKHIRLT 255 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a-----~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~--~v~~vp~~ 255 (435)
++++++++|+|+++++..++.+ +.++||. |++++|.|+.+...++..|. +++.++.+
T Consensus 159 --------~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~--------Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~ 222 (527)
T PRK09275 159 --------KGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDK--------IALMTPIFTPYLEIPELPRYDLEVVHINAD 222 (527)
T ss_pred --------CCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCE--------EEEeCCChHHHHHHHHHcCCCeEEEEeecC
Confidence 1134899999999999999987 4667776 99999999999999888865 44555544
Q ss_pred --CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 256 --SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 256 --~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
.++.+|++++++++++++++|++++||||||.+ +.+++|+++|++ ++++||+|++|+.|...+. ..
T Consensus 223 ~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~-------s~ 295 (527)
T PRK09275 223 EENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFR-------SL 295 (527)
T ss_pred cccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccccc-------CH
Confidence 358899999999999999999999999999999 568899999965 4999999999998753111 01
Q ss_pred CCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCC
Q psy10210 329 FDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDL 361 (435)
Q Consensus 329 ~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~ 361 (435)
... .+.-.+++.|++|... .+..+|+++..++
T Consensus 296 ~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 296 FAV-LPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred HHh-CCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 111 2234567778899842 3355799766554
No 141
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.81 E-value=1.2e-18 Score=173.73 Aligned_cols=163 Identities=20% Similarity=0.220 Sum_probs=129.0
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S 256 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~ 256 (435)
++++.+++++|.+ .+++|+|||+|+.+++.++ ..++++ |++++++|.++..++...|++++.++++ +
T Consensus 37 ~le~~la~~~g~~---~~v~~~sgt~al~lal~al~~~~Gd~--------Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~ 105 (379)
T PRK11658 37 ALEQAFCQLTGNQ---HAIAVSSATAGMHITLMALGIGPGDE--------VITPSLTWVSTLNMIVLLGATPVMVDVDRD 105 (379)
T ss_pred HHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHcCCCCCCE--------EEECCCcHHHHHHHHHHcCCEEEEEecCCC
Confidence 4444666677664 4688899999999999998 566665 9999999999999999999999999998 4
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
++.+|+++++++++++|++|+ |+|++|...++++|.++|++||+++|+|++++.+.... | ......|+
T Consensus 106 ~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~----~-----~~~g~~g~ 173 (379)
T PRK11658 106 TLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYK----G-----RHIGARGT 173 (379)
T ss_pred cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeEC----C-----eecCCCCC
Confidence 567999999999999999887 55569999999999999999999999999997443211 1 11223467
Q ss_pred cEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210 337 TSISVDTHKYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 337 d~~~~s~hK~~~~p~g~g~il~~~~~~~~ 365 (435)
++++++.+|.+.++.| |+++.+++++.+
T Consensus 174 ~~~Sf~~~K~l~~g~G-G~v~~~~~~~~~ 201 (379)
T PRK11658 174 AIFSFHAIKNITCAEG-GLVVTDDDELAD 201 (379)
T ss_pred EEEeCCCCCcCcccCc-eEEEECCHHHHH
Confidence 8899999998655543 666666666544
No 142
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.1e-18 Score=172.41 Aligned_cols=162 Identities=15% Similarity=0.157 Sum_probs=124.2
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccH
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDL 262 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~ 262 (435)
.++++++.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|+++++.+|+
T Consensus 68 aia~~~~~~~~-~I~it~G~~~al~~~~~~l~~~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 138 (353)
T PRK05387 68 AIAAYYGLDPE-QVFVGNGSDEVLAHAFLAFFNHDRP--------LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDV 138 (353)
T ss_pred HHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCH
Confidence 33333444443 8999999999999999999888877 99999999999999999999999999987888999
Q ss_pred HHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe
Q psy10210 263 AALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV 341 (435)
Q Consensus 263 ~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~ 341 (435)
+++++ +++++++++||||||.+.+.+++.++++.+ ++++++|++|..|.. ....+. ......+++..
T Consensus 139 ~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~-------~~~~~~-~~~~~~~i~~~ 206 (353)
T PRK05387 139 EDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG-------ESAIPL-IDRYPNLLVVQ 206 (353)
T ss_pred HHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC-------cchHHH-HhhCCCEEEEE
Confidence 98864 467899999999999999999999998876 999999999976421 111111 11112367788
Q ss_pred cCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 342 DTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 342 s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
|++|... ....+|+++ .++++.+.
T Consensus 207 S~SK~~~~~GlR~G~~~-~~~~~~~~ 231 (353)
T PRK05387 207 TFSKSRSLAGLRVGFAI-GHPELIEA 231 (353)
T ss_pred ehhHhhcchhhhceeee-cCHHHHHH
Confidence 9999743 335689955 45555443
No 143
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=3.3e-19 Score=176.07 Aligned_cols=170 Identities=16% Similarity=0.148 Sum_probs=129.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~ 256 (435)
.++++++++.+|.+++ ++++|+|+++++.+++.++.+++ +. |++++|+|..+...++..|++++.+|+++
T Consensus 60 ~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~~~~g~~~--------vli~~P~y~~y~~~~~~~G~~~~~v~~~~ 130 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAFCEPGKDA--------ILYCPPTYGMYSVSAETIGVEIRTVPTLD 130 (351)
T ss_pred HHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCCE--------EEEcCCCHHHHHHHHHHcCCEEEEeecCC
Confidence 3566677888887765 89999999999999999987665 44 99999999999999999999999999987
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCC-CC
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SL 333 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~ 333 (435)
++.+|++++++++ +++++|++++||||||.+-+.+++.++++.. ++++|+||+|..|... . ...++ ..
T Consensus 131 ~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~---~-----s~~~~~~~ 201 (351)
T PRK01688 131 NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQ---A-----SLAGWLAE 201 (351)
T ss_pred CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCC---C-----ChHHHHhh
Confidence 7899999999988 5899999999999999996666655555432 6889999999877521 0 00111 11
Q ss_pred CCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
.+-.++.-|++|.. .++.++|+++ .++++.+.
T Consensus 202 ~~n~iv~rSfSK~~glaGlRiGy~i-~~~~~i~~ 234 (351)
T PRK01688 202 YPHLVILRTLSKAFALAGLRCGFTL-ANEEVINL 234 (351)
T ss_pred CCCEEEEecchHhhcCHHHHHhHHh-CCHHHHHH
Confidence 12246667899963 2345578855 55555443
No 144
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=6.2e-19 Score=173.51 Aligned_cols=292 Identities=18% Similarity=0.202 Sum_probs=182.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHh----hcC-CCCCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210 116 EILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGL----TSY-TNPLHPDIFPGVCKMEAEVIKMCARMFNG 190 (435)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~----~~~-~~~~~~~~~~~~~~~e~~~~~~la~l~g~ 190 (435)
.+++.+.++.+.+...|+-+...++.......+.+...+.+.. ... +..-.-|..-.-.....+..+.+|+.||+
T Consensus 2 Pl~~aL~~y~~~~~~~fh~PGHk~G~~~~~~p~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~eAe~~aA~~fGA 81 (417)
T PF01276_consen 2 PLFEALKKYAEEGPYSFHMPGHKGGRGFDKSPAGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIKEAEELAARAFGA 81 (417)
T ss_dssp HHHHHHHHHHHTT-EESSSSTTTTTTCGGGSHHHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHHHHHHHHHHHHTE
T ss_pred cHHHHHHHHHhCCCceeecCccCCCCCCCcchHHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHHHHHHHHHHhcCC
Confidence 3678888888887777765544443322222334444333321 111 11111111112234566777899999998
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----ccccH---
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YTVDL--- 262 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~~d~--- 262 (435)
+. .-++++|+|.+|..++.+++.+++. |+++..+|-++..++...|+.+++++.. +. +.+++
T Consensus 82 d~--t~flvnGsT~g~~a~i~a~~~~gd~--------VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi~~~i~~~~~ 151 (417)
T PF01276_consen 82 DK--TFFLVNGSTSGNQAMIMALCRPGDK--------VLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGIIGGISPDEF 151 (417)
T ss_dssp SE--EEEESSHHHHHHHHHHHHHTTTTCE--------EEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-BEEB-GGGG
T ss_pred Ce--EEEEecCchHHHHHHHHHhcCCCCE--------EEEcCCcHHHHHHHHHHcCCeEEEecCCccccCCccCCChhhh
Confidence 75 5789999999999999999999888 9999999999999999999999999764 21 24566
Q ss_pred --HHHHHHhhcC--c---eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 263 --AALQSAITGN--T---VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 263 --~~l~~~i~~~--~---~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
+.+++++.++ . +++++++|++ .|.+.|+++|+++|++++++|+||||+|+... |.. .+-+....|
T Consensus 152 ~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~-F~~------lp~~a~~~g 223 (417)
T PF01276_consen 152 NEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFG-FHP------LPRSALALG 223 (417)
T ss_dssp SHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGG-CSG------GGTTCSSTT
T ss_pred hHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEcccccccc-CCC------Cccchhhcc
Confidence 8999999753 3 4499999988 89999999999999999999999999987654 221 123334557
Q ss_pred cc-------EEEecCCCCCCccCCcEEEEEeCCc-cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh-cHH
Q psy10210 336 VT-------SISVDTHKYGFTPKGSSVVLYRDLK-YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF-GFE 406 (435)
Q Consensus 336 vd-------~~~~s~hK~~~~p~g~g~il~~~~~-~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~-g~~ 406 (435)
+| +++.|+||.+.+...++++.+++.. +........-... ...|++...+|.+-.+.+.+ +.+
T Consensus 224 ad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~--------~TTSPSY~lmASlD~a~~~m~~~~ 295 (417)
T PF01276_consen 224 ADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMH--------QTTSPSYPLMASLDVARAQMEEEE 295 (417)
T ss_dssp SS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHH--------S-SS--HHHHHHHHHHHHHHSHHH
T ss_pred CccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHH--------cCCChHHHHHHHHHHHHHHHhhhh
Confidence 78 9999999998888999999999986 3222111111100 11355555666666666666 333
Q ss_pred H--HHHHHHHHHHHHHHHHHhcCCccccc
Q psy10210 407 A--QVWICVRYHFNYKSCLQNLSDLWLYL 433 (435)
Q Consensus 407 g--~~~~~~~~~~~~~~~~~~l~~l~~~~ 433 (435)
| +.+...+..+.+++.++.+.++..+.
T Consensus 296 G~~l~~~~i~~a~~~R~~i~~~~~~~~~~ 324 (417)
T PF01276_consen 296 GRELLEEAIELAEEFRKKINRLNDIWGFK 324 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence 3 22333333444555553335554443
No 145
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=1.8e-18 Score=173.18 Aligned_cols=188 Identities=15% Similarity=0.103 Sum_probs=138.8
Q ss_pred CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR 214 (435)
Q Consensus 135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~ 214 (435)
..++|.+..|.+++|+++++.+..... ...+ ++.+++++|+|+++++.+++.++.
T Consensus 36 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~--~~~~-----------------------~~~~~I~it~G~~~al~~~~~~l~ 90 (388)
T PRK08637 36 EIFPYAPPQGIPELRDLWQEKMLRENP--SLSG-----------------------KKMSLPIVTNALTHGLSLVADLFV 90 (388)
T ss_pred cccCCCCCCCCHHHHHHHHHHHhccCc--cccc-----------------------cccceeeEccchHHHHHHHHHHhc
Confidence 356677888999999999988765321 1111 122478999999999999999998
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHHHHHH-HcCCEEEEEecC-CCccccHHHHHHHhh----cCceEEEEeCCCCCcccc
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFDKAAN-YFGMKVKHIRLT-SSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTM 288 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~g~~v~~vp~~-~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~ 288 (435)
++++. |++++|+|+.+...+. ..|++++.+|+. +++.+|+++++++++ +.+.++++++||||||.+
T Consensus 91 ~~gd~--------Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~ 162 (388)
T PRK08637 91 DQGDT--------VLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYT 162 (388)
T ss_pred CCCCE--------EEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCC
Confidence 88877 9999999999998754 689999999984 556789999999886 456678888999999988
Q ss_pred ---cCHHHHHHHHHH-----cCCcEEEeccccchhhhcccccCCCCCCC-C-C--CCCCccEE-EecCCC-CCCccCCcE
Q psy10210 289 ---DDIGAIAKLGEK-----YGIPVHVDCCLGGFLAPFMSAAGYPLPPF-D-F--SLPGVTSI-SVDTHK-YGFTPKGSS 354 (435)
Q Consensus 289 ---~~i~~i~~la~~-----~~~~livD~~~~~~~~~~~~~~g~~~~~~-d-~--~~~gvd~~-~~s~hK-~~~~p~g~g 354 (435)
+.+++|+++|++ |++++|+||+|.++.+. +...++. . + ....+-.+ +.|+.| ++.+...+|
T Consensus 163 ~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~-----~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG 237 (388)
T PRK08637 163 PTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYE-----DSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVG 237 (388)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccC-----CccchhhHHHhhcccccceEEEeccccccCCCcccceE
Confidence 678888888875 89999999999988652 1111111 1 0 11123223 237778 455557899
Q ss_pred EEEEeC
Q psy10210 355 VVLYRD 360 (435)
Q Consensus 355 ~il~~~ 360 (435)
++++..
T Consensus 238 ~~~~~~ 243 (388)
T PRK08637 238 FITFGT 243 (388)
T ss_pred EEEEcc
Confidence 987653
No 146
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.5e-18 Score=173.64 Aligned_cols=160 Identities=19% Similarity=0.210 Sum_probs=127.3
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~ 254 (435)
++++.++++.|.+ ..+++++|++++.+++.++..+++. |+++.|.|.+ +...++..|.+++.++.
T Consensus 64 ~Le~~lA~l~g~~---~~v~~~sG~~Ai~~~l~all~pGD~--------Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 64 LLGEALAELEGGA---GGVITATGMGAINLVLNALLQPGDT--------LVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred HHHHHHHHHhCCC---ceEEEcCHHHHHHHHHHHHhCCCCE--------EEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 3556777778763 2367777799999999999877776 9999999987 44455666888888764
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+.... ..+++ .
T Consensus 133 -----~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~---------~~pl~---~ 195 (405)
T PRK08776 133 -----TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL---------QKPLE---F 195 (405)
T ss_pred -----CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCccccc---------CCccc---c
Confidence 378999999988999999999999999999999999999999999999999964321 12333 4
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
|+|+.+.|.||++.++.+ .|+++.+++++.+.
T Consensus 196 gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~ 229 (405)
T PRK08776 196 GADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ 229 (405)
T ss_pred cCCEEEecCceeecCCCCceEEEEEeCCHHHHHH
Confidence 889999999999766654 47767777766543
No 147
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.81 E-value=2.8e-18 Score=173.45 Aligned_cols=225 Identities=14% Similarity=0.039 Sum_probs=148.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH-----HHHHcC
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK-----AANYFG 246 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~-----~~~~~g 246 (435)
...++|..+++.+++++|.+.. +++++ +||+|+..++.++.++++. |+++.++|.++.. .+...|
T Consensus 68 ~~~~~e~~~~~~la~~~g~~~~-~i~~~-sgt~al~~~l~~l~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~~~g 137 (416)
T PRK00011 68 YVDVVEQLAIDRAKELFGAEYA-NVQPH-SGSQANAAVYFALLKPGDT--------ILGMDLAHGGHLTHGSPVNFSGKL 137 (416)
T ss_pred HHHHHHHHHHHHHHHHhCCCce-eeecC-CchHHHHHHHHHhcCCCCE--------EEEeccccCCccccccccccccce
Confidence 4556666678899999998764 45554 5688999999998777766 9999999976432 122346
Q ss_pred CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 247 MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 247 ~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
++++.+|++ +++.+|++++++++++ ++++++++++++ |...++++|.++|++||+++|+|++|+.+.... |
T Consensus 138 ~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~----g- 210 (416)
T PRK00011 138 YNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAA----G- 210 (416)
T ss_pred eeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCccCHHHHHHHHHHcCCEEEEECcchhccccc----C-
Confidence 788888887 4688999999999975 788888876544 566799999999999999999999986433210 1
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
..+.++. ++|+++.|+||++.||.| |+++++++++.+........+. + ++.....+++..+++....
T Consensus 211 -~~~~~~~--~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~~~---~------~~~~~~~~aa~~~a~~~~~ 277 (416)
T PRK00011 211 -VHPSPVP--HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFPGI---Q------GGPLMHVIAAKAVAFKEAL 277 (416)
T ss_pred -ccCCCCC--CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCccc---c------CCccHHHHHHHHHHHHHHH
Confidence 1122332 689999999998666665 6767766665543211111111 1 1122223344444444433
Q ss_pred H---HHHHHHHHHHHHHHHHHHHhc
Q psy10210 405 F---EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 405 ~---~g~~~~~~~~~~~~~~~~~~l 426 (435)
. +.+.++.+++.+.+.+.++++
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~~L~~~ 302 (416)
T PRK00011 278 EPEFKEYAQQVVKNAKALAEALAER 302 (416)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhC
Confidence 3 344555555555566655553
No 148
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=5e-19 Score=175.01 Aligned_cols=168 Identities=20% Similarity=0.179 Sum_probs=126.5
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~ 258 (435)
+++.+++.+|.+++ ++++|+|+++++.+++.++..++ +. |++++|+|+.+...++..|++++.+|+++++
T Consensus 65 Lr~aia~~~~~~~~-~I~it~Gs~~~i~~~~~~~~~~g~d~--------vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~ 135 (354)
T PRK04635 65 LINAYSAYAGVAPE-QILTSRGADEAIELLIRAFCEPGQDS--------IACFGPTYGMYAISAETFNVGVKALPLTADY 135 (354)
T ss_pred HHHHHHHHhCcCHH-HEEEeCCHHHHHHHHHHHhcCCCCCe--------EEEcCCChHHHHHHHHHcCCEEEEEecCCCC
Confidence 44455555566665 89999999999999999988776 55 9999999999999999999999999998778
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
.+|++.+++ + +++++|++++||||||.+-+.+++.++++.. ++++++|++|..|... . . ...+...... -
T Consensus 136 ~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~---~-s--~~~~~~~~~~-~ 206 (354)
T PRK04635 136 QLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPE---Y-S--VADLLASYPN-L 206 (354)
T ss_pred CCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccC---c-c--hHHHHhhCCC-E
Confidence 899998873 4 6899999999999999998888888888763 6999999999876421 0 0 0011001112 3
Q ss_pred EEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 338 SISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
++..|++|+.+ ++.++|+++. ++++.+.
T Consensus 207 iv~~S~SK~~~l~GlRlG~~i~-~~~~~~~ 235 (354)
T PRK04635 207 VVLRTLSKAFALAGARCGFTLA-NEELIEI 235 (354)
T ss_pred EEEechHHHhhhhHHHHhhhhC-CHHHHHH
Confidence 55678999832 3455799654 5555543
No 149
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.81 E-value=2.7e-18 Score=172.71 Aligned_cols=201 Identities=15% Similarity=0.140 Sum_probs=140.1
Q ss_pred hHhHHHHHHHHHH-hhcCCCCCCC--CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210 145 QQDLVDLLTEVFG-LTSYTNPLHP--DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK 221 (435)
Q Consensus 145 ~~~l~~~i~~~~~-~~~~~~~~~~--~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~ 221 (435)
.|.+++++.+.+. ++..+++.+. ...+...+++..+++.+++++|.+.. .++++ ||++|+..++.++.++++.
T Consensus 32 ~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt~a~~~~l~~l~~~Gd~-- 107 (402)
T cd00378 32 SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGSQANLAVYFALLEPGDT-- 107 (402)
T ss_pred CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcHHHHHHHHHHhcCCCCE--
Confidence 4556666554432 2222222222 12345566776678888999998753 45544 5789999999999877776
Q ss_pred CCCCCeEEEeCCCchhHHHH-----HHHcCCEEEEEecC-C--CccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHH
Q psy10210 222 GISLPEIVLPTTAHPAFDKA-----ANYFGMKVKHIRLT-S--SYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIG 292 (435)
Q Consensus 222 g~~~~~viv~~~~~~~~~~~-----~~~~g~~v~~vp~~-~--~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~ 292 (435)
|++++|+|+++... ++..|.+++.++++ + ++.+|++++++++. ++++++++++++|| ...+++
T Consensus 108 ------Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~ 179 (402)
T cd00378 108 ------IMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--RPIDFK 179 (402)
T ss_pred ------EEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--CCcCHH
Confidence 99999999875433 56678888777765 2 68899999999985 57899998888775 567999
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
+|+++|++||+++|+|++|...... .|. .+.++. ++|+++.|+||++.||.| |+++++++++.+.
T Consensus 180 ~I~~l~~~~~~~li~D~a~~~g~~~----~g~--~~~~~~--~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~ 244 (402)
T cd00378 180 RFREIADEVGAYLLVDMAHVAGLVA----GGV--FPNPLP--GADVVTTTTHKTLRGPRG-GLILTRKGELAKK 244 (402)
T ss_pred HHHHHHHhcCCEEEEEccchhhhhh----ccc--CCCccc--CCcEEEeccccCCCCCCc-eEEEeccHHHHHH
Confidence 9999999999999999996332221 021 122222 679999999998656665 6667766455443
No 150
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.81 E-value=4.4e-19 Score=175.90 Aligned_cols=208 Identities=15% Similarity=0.178 Sum_probs=151.5
Q ss_pred CHHHHHHHHHH-HHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210 113 NRLEILELVSN-YLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191 (435)
Q Consensus 113 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~ 191 (435)
.+.++++++.+ .... .....|....|.+++++++++++...... + .+
T Consensus 19 ~~~~~~~~~~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~-~-------------------------~~ 66 (363)
T PF00155_consen 19 PPPAAIKAAIRGAATS------SSFLGYPPPQGYPELREAIADFLGRRYGV-P-------------------------VD 66 (363)
T ss_dssp HHHHHHHHHHHHHHHH------TGCTSSTCTTHHHHHHHHHHHHHHHHHTH-H-------------------------TT
T ss_pred chHHHHHHHHHHhhcc------cccccCCCchhhHHHHHHHHHHhhhccCc-c-------------------------cc
Confidence 44555555554 2222 23556778888999999999998842211 1 12
Q ss_pred CCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210 192 PETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA 268 (435)
Q Consensus 192 ~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~ 268 (435)
++.++++++|+++++..+...+ .++++. |++++|+|+.+...++..|++++.+|++ .++.+|++++++.
T Consensus 67 ~~~~i~~~~G~~~~~~~~~~~~~~~~~~~--------vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 138 (363)
T PF00155_consen 67 PEANILVTSGAQAALFLLLRLLKINPGDT--------VLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEA 138 (363)
T ss_dssp GGEGEEEESHHHHHHHHHHHHHHSSTTSE--------EEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHH
T ss_pred cceEEEEecccccchhhhhhccccccccc--------ceecCCccccccccccccCceeeeccccccccccccccccccc
Confidence 3237888888888888888777 345555 9999999999999999999999999975 6788999999999
Q ss_pred hhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCc-c
Q psy10210 269 ITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGV-T 337 (435)
Q Consensus 269 i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gv-d 337 (435)
+++ +++++++++|+||||.+ +++++|+++|++||+++++|++|+.+...-. ++. + ......+. .
T Consensus 139 l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~---~~~--~~~~~~~~~~~v 213 (363)
T PF00155_consen 139 LDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP---DFG--PIRSLLDEDDNV 213 (363)
T ss_dssp HHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS---HTH--HHHGHHTTTSTE
T ss_pred cccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCC---ccC--cccccccccccc
Confidence 987 67899999999999998 6677777779999999999999998866310 000 0 11112222 4
Q ss_pred EEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 338 SISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
+++.|++|..+ ....+|+++. ++++.+.
T Consensus 214 i~~~S~SK~~g~~GlRvG~i~~-~~~~~~~ 242 (363)
T PF00155_consen 214 IVVGSLSKSFGLPGLRVGYIVA-PPELIER 242 (363)
T ss_dssp EEEEESTTTTTSGGGTEEEEEE-EHHHHHH
T ss_pred eeeeeccccccccccccccccc-hhhhhhh
Confidence 77789999743 3356899777 5555544
No 151
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=7.5e-19 Score=174.52 Aligned_cols=158 Identities=20% Similarity=0.204 Sum_probs=126.3
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLT 255 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~ 255 (435)
+.+.+|++.|. +++++|+||++|+.+++.++.++++. |+++.+.|.+.... ....|++++.++.
T Consensus 58 Le~~lA~leg~---e~ivvt~gg~~Ai~~~l~all~~Gd~--------Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~- 125 (388)
T PRK08861 58 LEQTLSELESG---KGAVVTNCGTSALNLWVSALLGPDDL--------IVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ- 125 (388)
T ss_pred HHHHHHHHhCC---CeEEEECCHHHHHHHHHHHHcCCCCE--------EEEcCCchHHHHHHHHHHHhcCCeEEEEECC-
Confidence 44566777764 37999999999999999998877766 99999999874433 3334677777752
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.|+++++++++++|++|++++|+||||.+.++++|.++|+++|+++++|++|+.... ..|++ .|
T Consensus 126 ----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~---------~~pl~---~G 189 (388)
T PRK08861 126 ----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVL---------QKPLE---LG 189 (388)
T ss_pred ----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccc---------CCCcc---cC
Confidence 488999999999999999999999999999999999999999999999999975432 12443 48
Q ss_pred ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
+|+++.|+|||+.|+.+ .|+++.+++++.+
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~ 221 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAE 221 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecHHHHHH
Confidence 99999999999877765 4666666655543
No 152
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.9e-18 Score=171.11 Aligned_cols=169 Identities=16% Similarity=0.027 Sum_probs=133.1
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~ 258 (435)
++++.+++++|.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|.++++
T Consensus 90 ~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~~~~~~~~~gd~--------Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~ 160 (380)
T PLN03026 90 RLRAALAEDSGLESE-NILVGCGADELIDLLMRCVLDPGDK--------IIDCPPTFGMYVFDAAVNGAEVIKVPRTPDF 160 (380)
T ss_pred HHHHHHHHHhCcChh-hEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCEEEEeecCCCC
Confidence 466667777777665 8999999999999999998777766 9999999999999999999999999988778
Q ss_pred cccHHHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 259 TVDLAALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 259 ~~d~~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
.+|++++++++ ++++++|++++||||||.+-+.+++.++++.. +++++||+|..|... +.. ........-.
T Consensus 161 ~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-----~~~--~~~~~~~~~v 232 (380)
T PLN03026 161 SLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-----ESR--MKWVKKYDNL 232 (380)
T ss_pred CcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-----cch--HHHHHhCCCE
Confidence 89999999998 67899999999999999999999999999764 899999999877431 100 0011112335
Q ss_pred EEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 338 SISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 338 ~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
++..|++|..+ ++.++|+++ .++++.+
T Consensus 233 iv~~SfSK~~glaGlRiGy~~-~~~~~i~ 260 (380)
T PLN03026 233 IVLRTFSKRAGLAGLRVGYGA-FPLSIIE 260 (380)
T ss_pred EEEecchHhhcCccccceeee-cCHHHHH
Confidence 67788999732 445679855 4455543
No 153
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.81 E-value=8.6e-19 Score=176.39 Aligned_cols=192 Identities=11% Similarity=0.077 Sum_probs=139.9
Q ss_pred cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceE--EcCChHHHHHHHHH--
Q psy10210 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGC--MTSGGTESIMMACK-- 211 (435)
Q Consensus 136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~--~t~ggteai~~a~~-- 211 (435)
...|.+..|.+++|+++++++...... . .+++ +++ .|.|+++|+.+++.
T Consensus 65 ~~~Y~~~~G~~~lR~aia~~~~~~~~~-~-------------------------~~~~-~v~~~~t~G~~~al~~~~~~l 117 (404)
T PTZ00376 65 DKEYLPIEGLQSFIEAAQKLLFGEASY-A-------------------------LAEK-RIATVQALSGTGALRLGFEFL 117 (404)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCcc-c-------------------------cccC-eEEEeeccCcchHHHHHHHHH
Confidence 466778889999999999988543111 1 1233 677 58999999988876
Q ss_pred -HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210 212 -AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAIT---GNTVMLVGSMPNFPY 285 (435)
Q Consensus 212 -a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt 285 (435)
++.++|+. |++++|+|+.+...++..|++++.+|+. +++.+|++.+++++. ++++++++++|||||
T Consensus 118 ~~~~~~Gd~--------Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPT 189 (404)
T PTZ00376 118 KRFLPAGTT--------VYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPT 189 (404)
T ss_pred HHhcCCCCE--------EEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 44556665 9999999999999999999999999983 457899999999885 346788889999999
Q ss_pred ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEE--Ee
Q psy10210 286 GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVL--YR 359 (435)
Q Consensus 286 G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il--~~ 359 (435)
|.+ +++++|+++|++|++++++|++|..+..............++. ...-.++..|++|... ....+|+++ +.
T Consensus 190 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~ 268 (404)
T PTZ00376 190 GVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE-RGVEFLVAQSFSKNMGLYGERIGALHIVCA 268 (404)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh-cCCcEEEEEeCCCcccccccccceEEEEeC
Confidence 999 6788999999999999999999988765210000000001110 1112466678999854 346789974 45
Q ss_pred CCcc
Q psy10210 360 DLKY 363 (435)
Q Consensus 360 ~~~~ 363 (435)
++++
T Consensus 269 ~~~~ 272 (404)
T PTZ00376 269 NKEE 272 (404)
T ss_pred CHHH
Confidence 6553
No 154
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.80 E-value=4.3e-18 Score=170.80 Aligned_cols=251 Identities=11% Similarity=0.025 Sum_probs=165.9
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|.+.+++.+.+...... ...+....+..++..++++++++++|.+ +++++|+| ++++..++.++.++++.
T Consensus 58 ~~~i~~a~~~~~~~~~~~-~~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~~~~~~~l~~~gd~----- 128 (397)
T PRK06939 58 HPELIAAAKAALDSHGFG-MASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDANGGLFETLLGKEDA----- 128 (397)
T ss_pred CHHHHHHHHHHHHHcCCC-CcccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHHHHHHHHhCCCCCE-----
Confidence 567777777777653221 1122223456677788888899988864 36777776 88999999888777766
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
|++++|+|+++...++..|++++.++. .|++++++.+++ ++++|+..+..|++|..+++++|.++|
T Consensus 129 ---vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la 200 (397)
T PRK06939 129 ---IISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLA 200 (397)
T ss_pred ---EEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHH
Confidence 999999999999999999998887764 478888887763 678888888899999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg 377 (435)
++||+++|+|++|+.+... ..+.+.. ..+. ..++|+++.|+||++.++ ..|+++. ++++.+........+.
T Consensus 201 ~~~~~~li~De~~~~g~~~---~~~~~~~~~~~~-~~~~~i~~~S~sK~~~g~-r~G~v~~-~~~~~~~l~~~~~~~~-- 272 (397)
T PRK06939 201 DKYDALVMVDDSHAVGFVG---ENGRGTVEHFGV-MDRVDIITGTLGKALGGA-SGGYTAG-RKEVIDWLRQRSRPYL-- 272 (397)
T ss_pred HHhCCEEEEECcccccCcC---CCCCCHHHHcCC-CCCCcEEEEECHHHhCcc-CceEEEe-CHHHHHHHHHhCcccc--
Confidence 9999999999999632221 1111000 1111 235789999999996455 4588554 4555443211111111
Q ss_pred CCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210 378 NYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l 426 (435)
..++......+++.++++.+.. +...++.++..+.+.+.++.+
T Consensus 273 ------~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 273 ------FSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred ------ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 1122223333445555555422 345566666666666666554
No 155
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.80 E-value=3.8e-18 Score=172.49 Aligned_cols=226 Identities=15% Similarity=0.164 Sum_probs=148.3
Q ss_pred CCccccCCCCCCCCHHHH-HHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEI-LELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEA 178 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~ 178 (435)
.+.+..+.|.....+.+. .+.+.+.+.... .......|....|.+++|+++++++..+....
T Consensus 32 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~--------------- 94 (416)
T PRK09440 32 AIMLGGGNPAHIPEMEDYFRDLLADLLASGK--LTEALGNYDGPQGKDELIEALAALLNERYGWN--------------- 94 (416)
T ss_pred ceeccCCCCCccCCHHHHHHHHHHHHhcCcc--cccccccCCCCCCCHHHHHHHHHHHHHHhCCC---------------
Confidence 355666777753444444 444444443211 11223457777899999999999987643221
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEE-eCCCchhHHHHHHHcCC----EEEEEe
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVL-PTTAHPAFDKAANYFGM----KVKHIR 253 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv-~~~~~~~~~~~~~~~g~----~v~~vp 253 (435)
.++ ++|++|+|+++++.+++.++.+++.. .+++.|++ .+|+|+.+...+...+. ....++
T Consensus 95 -----------v~~-~~I~it~Ga~~al~~~~~~l~~~~~~---~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~ 159 (416)
T PRK09440 95 -----------ISP-QNIALTNGSQSAFFYLFNLFAGRRAD---GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIEL 159 (416)
T ss_pred -----------CCh-hhEEEccChHHHHHHHHHHHhccccC---CCCCeEEEecCCCchhhHHHhhccCceeeccccccc
Confidence 233 38999999999999999998753110 01234999 69999999887664442 223334
Q ss_pred cCC---CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210 254 LTS---SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327 (435)
Q Consensus 254 ~~~---~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~ 327 (435)
++. ++.+|+++++ +.++++++++++||||||.+ +.+++|+++|++|++++|+|++|+.+.... ...
T Consensus 160 ~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~----- 231 (416)
T PRK09440 160 LPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFS----- 231 (416)
T ss_pred ccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chh-----
Confidence 432 3578999987 46678999999999999999 668899999999999999999997532110 000
Q ss_pred CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
.......+-.++..|++|++.+...+|+++ .++++.+.
T Consensus 232 ~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i-~~~~l~~~ 269 (416)
T PRK09440 232 EATPLWNPNIILCMSLSKLGLPGVRCGIVI-ADEEIIEA 269 (416)
T ss_pred hcCccccCCeEEEecccccCCCcceEEEEe-CCHHHHHH
Confidence 000001123466678999866667899955 45555443
No 156
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.80 E-value=5.5e-18 Score=170.87 Aligned_cols=213 Identities=11% Similarity=0.023 Sum_probs=149.2
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|+.+ +++.+.+.+.+.+...... .....|.+..|.+++++++++++...... .
T Consensus 37 i~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~LR~aia~~~~~~~g~-~---------------- 96 (409)
T PRK07590 37 IRLGIGDVTQP-LPPAVIEAMHKAVDEMGTA--ETFRGYGPEQGYDFLREKIAENDYQARGC-D---------------- 96 (409)
T ss_pred EEecCcCCCCC-CCHHHHHHHHHHHhccccc--CCccCCCCCCCCHHHHHHHHHHHHHhcCC-c----------------
Confidence 45556667763 4456777777766542111 12456667789999999999987653221 1
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE-----------E
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK-----------V 249 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~-----------v 249 (435)
.++ +++++|+|+++++.+++ .+.++++. |++++|+|+.+...++..|.+ +
T Consensus 97 ---------~~~-~~I~it~Ga~~al~~l~-~~~~~gd~--------V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~ 157 (409)
T PRK07590 97 ---------ISA-DEIFISDGAKCDTGNIL-DIFGPDNT--------IAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGI 157 (409)
T ss_pred ---------CCh-hhEEECCCHHHHHHHHH-HhcCCCCE--------EEEeCCCCcchHHHHHHcCCcccccccccccce
Confidence 234 38999999999999865 44456665 999999999999999999987 8
Q ss_pred EEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 250 KHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 250 ~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
+.+|++. ++..|++ .+++++|++++||||||.+ +.+++|+++|++||++|++||+|+.+... +.
T Consensus 158 ~~v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-----~~ 226 (409)
T PRK07590 158 VYLPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISD-----PS 226 (409)
T ss_pred eEeecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccC-----CC
Confidence 8999873 2334432 2578999999999999999 67889999999999999999999987541 11
Q ss_pred CCCCC-CCCC-CCccEEEecCCCCC-CccCCcEEEEEeCCccc
Q psy10210 325 PLPPF-DFSL-PGVTSISVDTHKYG-FTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 325 ~~~~~-d~~~-~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~ 364 (435)
..+++ .+.. .+..++..|+.|.. .+...+|+++.. +++.
T Consensus 227 ~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~-~~li 268 (409)
T PRK07590 227 LPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP-KELK 268 (409)
T ss_pred CCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC-HHHh
Confidence 11111 1111 12345567899985 355778996654 4443
No 157
>PRK03321 putative aminotransferase; Provisional
Probab=99.80 E-value=2e-18 Score=170.62 Aligned_cols=172 Identities=16% Similarity=0.093 Sum_probs=130.5
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.++++++.+++ ++++|+|+++++..++.++.++++. |+++.|+|..+...++..|++++.+|+++++.
T Consensus 62 lr~~ia~~~~~~~~-~I~~~~G~~~~l~~~~~~~~~~gd~--------Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~~ 132 (352)
T PRK03321 62 LRAALAEHLGVPPE-HVAVGCGSVALCQQLVQATAGPGDE--------VIFAWRSFEAYPILVQVAGATPVQVPLTPDHT 132 (352)
T ss_pred HHHHHHHHhCcCHH-HEEECCCHHHHHHHHHHHhcCCCCE--------EEeCCCCHHHHHHHHHHcCCEEEEccCCCCCC
Confidence 34444455554543 8999999999999999888777766 99999999999889999999999999986678
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCC-Cc
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-GV 336 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-gv 336 (435)
+|+++++++++++++++++++|+||||.+-+.+++.++|++ +++++++|++|+++... +.....+..... .-
T Consensus 133 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 133 HDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRD-----DDVPDGLELVRDHPN 207 (352)
T ss_pred CCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccC-----cCCCcHHHHHhhCCC
Confidence 99999999998899999999999999999999999999987 59999999999987641 110011111111 22
Q ss_pred cEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
.+++.|+.|..+ ....+|+++. ++++.+.
T Consensus 208 vi~~~S~SK~~g~~GlRiG~~v~-~~~~~~~ 237 (352)
T PRK03321 208 VVVLRTFSKAYGLAGLRVGYAVG-HPEVIAA 237 (352)
T ss_pred EEEEecchHHhhhHHHhhhhhcC-CHHHHHH
Confidence 355568899843 2345889654 4555543
No 158
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.80 E-value=5.5e-18 Score=167.30 Aligned_cols=231 Identities=17% Similarity=0.157 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
..++++.+++++|.+ ++++++|||+|+.+++.++. .+++. |+++.++|.++..++...|++++.++++
T Consensus 20 ~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l~~~~gd~--------vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 88 (352)
T cd00616 20 VREFEKAFAEYLGVK---YAVAVSSGTAALHLALRALGIGPGDE--------VIVPSFTFVATANAILLLGATPVFVDID 88 (352)
T ss_pred HHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHcCCCCCCE--------EEeCCcchHHHHHHHHHcCCeEEEEecC
Confidence 345556777888752 57888899999999999873 45544 9999999999999999999999999998
Q ss_pred C-CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 256 S-SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 256 ~-~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+ ++.+|++++++++++++++|++++ ++|.+.++++|.++|+++|+++|+|++|+.+.... +. +.. .
T Consensus 89 ~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~----~~---~~~---~ 155 (352)
T cd00616 89 PDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYK----GR---KVG---T 155 (352)
T ss_pred CCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeEC----CE---Ecc---c
Confidence 5 788999999999988999998765 58999999999999999999999999997443210 10 011 1
Q ss_pred CccEEEec--CCCCCCccCCcEEEEEeCCccccccccccCCCCCCC---CCCCccccCCCchHHHHHHHHHHHhcHHHHH
Q psy10210 335 GVTSISVD--THKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN---YGSPSVSGSRSGGIIATCWAAMMYFGFEAQV 409 (435)
Q Consensus 335 gvd~~~~s--~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~---~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~ 409 (435)
..|+.++| .||++.++. .|+++++++++.+............. +.......+-....+.++.+....-+.+...
T Consensus 156 ~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~ 234 (352)
T cd00616 156 FGDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEII 234 (352)
T ss_pred CcceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHH
Confidence 12555555 559963343 36667776665432111100000000 0000111111111222222222223345566
Q ss_pred HHHHHHHHHHHHHHHhcCCcccc
Q psy10210 410 WICVRYHFNYKSCLQNLSDLWLY 432 (435)
Q Consensus 410 ~~~~~~~~~~~~~~~~l~~l~~~ 432 (435)
++.+++.+.+.+.++.++++..+
T Consensus 235 ~~~~~~~~~~~~~L~~~~g~~~~ 257 (352)
T cd00616 235 ARRREIAERYKELLADLPGIRLP 257 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCccCC
Confidence 66677777777777777766654
No 159
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=1.4e-18 Score=173.17 Aligned_cols=167 Identities=12% Similarity=-0.015 Sum_probs=131.4
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH-HH-HHHHc
Q psy10210 169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF-DK-AANYF 245 (435)
Q Consensus 169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~-~~-~~~~~ 245 (435)
..+.+.++..++++.+++++|.+++.+++++ +|||++++.++.++..+++. .++....|.+- .. +++..
T Consensus 42 r~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~--------~vi~~g~f~~~~~~~~~~~~ 113 (378)
T PRK03080 42 RQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRV--------DHLAWESFGSKWATDVVKQL 113 (378)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcc--------eEEEeCHHHHHHHHHHHhhc
Confidence 3467888999999999999998655567777 49999999999988542122 34445566663 33 34677
Q ss_pred CC-EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 246 GM-KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 246 g~-~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
|+ +++.++.+.++.+|+++++ . ++.|.+++.+|.||.+.|+++|++ +++|+++++|++++.+..
T Consensus 114 g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~-------- 178 (378)
T PRK03080 114 KLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL-------- 178 (378)
T ss_pred CCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccC--------
Confidence 99 9999988766778877643 2 567899999999999999999999 889999999999865433
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY 363 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~ 363 (435)
++|+.. +|++++++|||+++|.|+|+++++++.+
T Consensus 179 ---pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~ 212 (378)
T PRK03080 179 ---PLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAV 212 (378)
T ss_pred ---CCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHH
Confidence 677764 8999999999988999999988886543
No 160
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=4.2e-18 Score=169.49 Aligned_cols=172 Identities=18% Similarity=0.170 Sum_probs=130.8
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.+++.+|.+++ ++++|+|+++++.+++.++.++++. |+++.|+|+.+...++..|++++.+|+++++.
T Consensus 76 lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~~~~~gd~--------vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~ 146 (371)
T PRK05166 76 LREAIAARTGVPAD-RIILGNGSEDLIAVICRAVLRPGDR--------VVTLYPSFPLHEDYPTMMGARVERVTVTPDLG 146 (371)
T ss_pred HHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCeEEEeecCCCCC
Confidence 44455555565554 8999999999999999998777766 99999999999999999999999999987788
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCC-CCC-CCCC
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDF-SLPG 335 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~-~~~g 335 (435)
+|+++++++++++++++++++|+||||.+-+.+++.++++. .++++++|++|..+.. +...++ +.. ...+
T Consensus 147 ~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~------~~~~~~~~~~~~~~~ 220 (371)
T PRK05166 147 FDLDALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA------GDDYPSALTLLKARG 220 (371)
T ss_pred CCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC------CcCcccHHHHHhhcC
Confidence 99999999998899999999999999999666655555543 4889999999998763 111111 111 1111
Q ss_pred -ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 336 -VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 -vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
-.++..|+.|... +...+|+++..++++.+.
T Consensus 221 ~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~ 253 (371)
T PRK05166 221 LPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGL 253 (371)
T ss_pred CCEEEEeechHhhhcchhheeeeecCCHHHHHH
Confidence 2456778999843 446789977777766544
No 161
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=2.7e-18 Score=170.92 Aligned_cols=208 Identities=17% Similarity=0.113 Sum_probs=146.1
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~ 254 (435)
++++.++++.|.+ .+++++||++++.+++.++.++++. |++++|.|++....+ ...|.++..++
T Consensus 56 ~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l~~~GD~--------Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 56 VVQRALAELEGGA---GAVLTNTGMSAIHLVTTVFLKPGDL--------LVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred HHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHcCCCCE--------EEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 3445677777642 5899999999999999998877776 999999999744332 22345666654
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
..|++++++++++++++|++++|+||||.+.++++|.++|+++|+++++|++|+.+.. ..++ ..
T Consensus 124 ----~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~---------~~pl---~~ 187 (386)
T PRK08045 124 ----QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL---------QNPL---AL 187 (386)
T ss_pred ----CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc---------CCch---hh
Confidence 2589999999999999999999999999999999999999999999999999975432 1133 34
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHH
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC 412 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~ 412 (435)
|+|+++.|+|||+.|+.+ .|+++.+++++.+...... ...|. . .....+|.+++.+. .+..++
T Consensus 188 gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~-~~~g~---------~---~~p~~~~l~~rgl~--tl~~R~ 252 (386)
T PRK08045 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWA-NNIGV---------T---GGAFDSYLLLRGLR--TLVPRM 252 (386)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHH-HhcCC---------C---CCHHHHHHHHhhhc--cHHHHH
Confidence 789999999999877765 5776666666544321111 11111 0 11236676666664 355555
Q ss_pred HHHHHHHHH---HHHhcCCc
Q psy10210 413 VRYHFNYKS---CLQNLSDL 429 (435)
Q Consensus 413 ~~~~~~~~~---~~~~l~~l 429 (435)
++..+.+.. .++.-+.+
T Consensus 253 ~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 253 ELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCE
Confidence 555555444 44444544
No 162
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=5.7e-18 Score=170.58 Aligned_cols=153 Identities=22% Similarity=0.263 Sum_probs=123.7
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp 253 (435)
.++++.++++.|... .++|++||+|+.+++.++..+++. ||++...|.+....+ ...|++++.++
T Consensus 67 ~~le~~lA~l~g~~~---av~~sSGt~Al~~al~~ll~~Gd~--------Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 135 (433)
T PRK08134 67 AVLEERVAALEGGVG---AIATASGQAALHLAIATLMGAGSH--------IVASSALYGGSHNLLHYTLRRFGIETTFVK 135 (433)
T ss_pred HHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHHhCCCCE--------EEEeCCccHHHHHHHHHHHhhCCeEEEEEC
Confidence 344557777887653 588999999999999988766665 999999998764443 45799999998
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
++ |+++++++++++|++|++++++||+|.+.|+++|.++|+++|+++++|++++.... ..++ .
T Consensus 136 ~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~---------~~pl---~ 198 (433)
T PRK08134 136 PG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL---------LRPF---E 198 (433)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence 64 79999999999999999999999999999999999999999999999999864322 1122 4
Q ss_pred CCccEEEecCCCCCCccCC--cEEEEEe
Q psy10210 334 PGVTSISVDTHKYGFTPKG--SSVVLYR 359 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g--~g~il~~ 359 (435)
.|+|+++.|.|||+ +|.| +|.+++.
T Consensus 199 ~GaD~vv~S~tK~l-~g~g~~~gG~v~~ 225 (433)
T PRK08134 199 HGADLVYHSATKFL-GGHGTAIGGVLVD 225 (433)
T ss_pred cCCCEEEecccccc-CCCCCceEEEEEe
Confidence 58999999999995 5544 4555554
No 163
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=5.2e-18 Score=168.20 Aligned_cols=170 Identities=19% Similarity=0.145 Sum_probs=131.4
Q ss_pred HHHHHHHHHHhCCCCCCceEE-cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCM-TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS 256 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~-t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~ 256 (435)
.++++.+++++|.+++ ++++ |+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|.++
T Consensus 72 ~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 142 (361)
T PRK00950 72 PELREALSKYTGVPVE-NIIVGGDGMDEVIDTLMRTFIDPGDE--------VIIPTPTFSYYEISAKAHGAKPVYAKREE 142 (361)
T ss_pred HHHHHHHHHHhCCCHH-HEEEeCCCHHHHHHHHHHHhcCCCCE--------EEEcCCChHHHHHHHHHcCCEEEEeecCC
Confidence 4555666677777665 7888 788899999999888766665 99999999999999999999999999877
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
++.+|++++++.++++++++++++|+||||.+.+.+++.++|+++|+++|+|++|++|.- ....++. ....-
T Consensus 143 ~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-------~~~~~~~-~~~~~ 214 (361)
T PRK00950 143 DFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-------YDYTPLA-LEYDN 214 (361)
T ss_pred CCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-------cchHHHH-HhcCC
Confidence 778999999999988899999999999999999999999999999999999999987641 0011111 01112
Q ss_pred cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.++..|++|..+ ....+|+++. ++++.+
T Consensus 215 vi~~~S~SK~~g~~GlRiG~~~~-~~~~~~ 243 (361)
T PRK00950 215 LIIGRTFSKVFGLAGLRIGYGFV-PEWLID 243 (361)
T ss_pred EEEEEeehHhhcCchhhcchhcC-CHHHHH
Confidence 355668889742 2245788654 444443
No 164
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=7.3e-18 Score=167.56 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=130.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~ 258 (435)
++++.+++++|.+++ ++++|+|+++++.+++.++.++++. |++++|+|..+...++..|++++.+|. +++
T Consensus 71 ~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~~~~~l~~~gd~--------vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~ 140 (367)
T PRK02731 71 ELKAALAEKFGVDPE-RIILGNGSDEILELLARAYLGPGDE--------VIYSEHGFAVYPIAAQAVGAKPVEVPA-KDY 140 (367)
T ss_pred HHHHHHHHHhCcCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEEecCCHHHHHHHHHHcCCeEEEecc-cCC
Confidence 566667777777654 8999999999999999888766665 999999999999888999999999998 457
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCC-C
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-G 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-g 335 (435)
.+|++++++++++++++|++++|+||||.+-+.+++.++++.+ |+++++|++|..+... +.....++.... .
T Consensus 141 ~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~-----~~~~~~~~~~~~~~ 215 (367)
T PRK02731 141 GHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR-----KDYEDGLELVAKFP 215 (367)
T ss_pred CCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC-----cCcccHHHHHhhcC
Confidence 7999999999988999999999999999999889999988875 8999999999876541 100011221111 1
Q ss_pred ccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYG-FTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~-~~p~g~g~il~~~~~~~~ 365 (435)
-.+++.|+.|.. .++.++|+++. ++++.+
T Consensus 216 ~~i~~~S~SK~~g~~G~RiG~l~~-~~~~~~ 245 (367)
T PRK02731 216 NVVVTRTFSKAYGLAGLRVGYGIA-PPEIID 245 (367)
T ss_pred CEEEEeeehHhhcCcccceeeeeC-CHHHHH
Confidence 245556788973 23456799655 455544
No 165
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.79 E-value=6.2e-18 Score=167.85 Aligned_cols=206 Identities=15% Similarity=0.095 Sum_probs=143.1
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|.. ..++.+.+.+.+.... ..|....|.+++++++++++.+....+..
T Consensus 30 i~l~~~~p~~-~~~~~~~~~~~~~~~~---------~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~--------------- 84 (364)
T PRK07865 30 VDLSVGTPVD-PVPPVIQEALAAAADA---------PGYPTTAGTPELREAIVGWLARRRGVTGL--------------- 84 (364)
T ss_pred EEcCCCCCCC-CCCHHHHHHHHHHHhh---------CCCCCccCCHHHHHHHHHHHHHHcCCCCC---------------
Confidence 4455566654 3345566666554321 14556678999999999998764322111
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
++ +++++|+|+++++.+++.++ .++++. |++++|+|+.+...++..|++++.++.
T Consensus 85 ----------~~-~~I~it~G~~~~i~~~~~~l~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~~~~----- 140 (364)
T PRK07865 85 ----------DP-AAVLPVIGSKELVAWLPTLLGLGPGDV--------VVIPELAYPTYEVGARLAGATVVRADS----- 140 (364)
T ss_pred ----------Cc-ccEEEccChHHHHHHHHHHHcCCCCCE--------EEECCCCcccHHHHHHhcCCEEEecCC-----
Confidence 23 38999999999999988877 566666 999999999999999999999887752
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC----
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS---- 332 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~---- 332 (435)
++++. .+++++|++++|+||||.+ +++++|.++|++||+++++|++|+.+... +.....++..
T Consensus 141 --~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~ 210 (364)
T PRK07865 141 --LTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWD-----AEPVSILDPRVCGG 210 (364)
T ss_pred --hhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccC-----CCCCccccccccCC
Confidence 22322 2578999999999999988 66889999999999999999999876541 1111111111
Q ss_pred CCCccEEEecCCCCC-CccCCcEEEEEeCCccccc
Q psy10210 333 LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~~ 366 (435)
...-.+++.|++|.. .....+|+++ .++++.+.
T Consensus 211 ~~~~~i~~~S~SK~~~~~GlRiG~i~-~~~~~~~~ 244 (364)
T PRK07865 211 DHTGLLAVHSLSKQSNLAGYRAGFVA-GDPALVAE 244 (364)
T ss_pred ccceEEEEeechhccCCCceeeEEEe-cCHHHHHH
Confidence 112357778899984 3345689854 55565443
No 166
>PLN02721 threonine aldolase
Probab=99.79 E-value=1.6e-18 Score=171.26 Aligned_cols=169 Identities=17% Similarity=0.178 Sum_probs=124.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchhHHH---HHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPAFDK---AANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~~~~---~~~~~g~~v~~vp~ 254 (435)
++++.+++++|.+ .++++++|++++..++.++.+ +++. |++++++|.+..+ .+...|++++.+|.
T Consensus 44 ~l~~~la~~~~~~---~~~~~~~Gs~a~~~~l~~~~~~~gd~--------Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 112 (353)
T PLN02721 44 RLEEEMAKIFGKE---AALFVPSGTMGNLISVLVHCDVRGSE--------VILGDNSHIHLYENGGISTLGGVHPRTVKN 112 (353)
T ss_pred HHHHHHHHHhCCc---eeEEecCccHHHHHHHHHHccCCCCe--------EEEcCccceehhcccchhhhcCceeEecCC
Confidence 3445566666653 357778889898888888765 6665 9999999977665 57778999999998
Q ss_pred CCCccccHHHHHHHhh-------cCceEEEEeC-CCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 255 TSSYTVDLAALQSAIT-------GNTVMLVGSM-PNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~-------~~~~~v~~~~-p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
++++.+|+++++++++ +++++|++++ ++||+|.+ +++++|.++|++||+++|+|++|..+...+ .+
T Consensus 113 ~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~---~~ 189 (353)
T PLN02721 113 NEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVA---LG 189 (353)
T ss_pred CcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhh---hC
Confidence 8888899999999998 5889999976 57889987 348999999999999999999875322100 11
Q ss_pred CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
. +.+....++|++++++||++.+|. |++++.++++...
T Consensus 190 ~---~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~ 227 (353)
T PLN02721 190 V---PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRK 227 (353)
T ss_pred C---CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHh
Confidence 1 122123468999999999965554 4446667776543
No 167
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.79 E-value=2.9e-18 Score=171.23 Aligned_cols=158 Identities=20% Similarity=0.215 Sum_probs=124.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp 253 (435)
.++++.+++++|.+ .+++|+||++|+.+++.++.++++. |+++++.|.+.. ..+...|++++.++
T Consensus 64 ~~le~~la~l~g~~---~~v~~ssG~~Ai~~al~al~~~Gd~--------Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 64 TMFQERLAALEGAE---ACVATASGMAAILAVVMALLQAGDH--------VVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 44556778888764 4688999999999999998877776 999999887744 45667899999998
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
++ |+++++++++++|++|++++|+||+|.+.++++|.++|++||+++++|++++.... ..++ .
T Consensus 133 ~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~---------~~pl---~ 195 (390)
T PRK08133 133 LT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL---------QQPL---K 195 (390)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence 64 78999999999999999999999999999999999999999999999999864322 1122 3
Q ss_pred CCccEEEecCCCCCCccC-CcEEEEEeCCcc
Q psy10210 334 PGVTSISVDTHKYGFTPK-GSSVVLYRDLKY 363 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~ 363 (435)
.|+|+++.|+||+..++. ..|.+++.+++.
T Consensus 196 ~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~ 226 (390)
T PRK08133 196 LGADVVIHSATKYLDGQGRVLGGAVVGSKEL 226 (390)
T ss_pred hCCcEEEeecceeecCCcceEeEEEEcCHHH
Confidence 378999999999954432 243435455544
No 168
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.79 E-value=1.3e-18 Score=172.06 Aligned_cols=258 Identities=11% Similarity=0.001 Sum_probs=161.3
Q ss_pred hHhHHHHHHHHHHhhcCCCCCC---CCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCC-hHHHHHHHHHHHHHHhhhh
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLH---PDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSG-GTESIMMACKAYRDYAREE 220 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~---~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~g-gteai~~a~~a~~~~~~~~ 220 (435)
++++++++.+.+..+....... .+..+.+.++..++++.+++++|.+.+.++++|+| +|+++++++.++..+++.
T Consensus 11 p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~- 89 (355)
T cd00611 11 PEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT- 89 (355)
T ss_pred CHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe-
Confidence 4556666655553321111111 12235667888899999999999865568899877 999999999998542221
Q ss_pred cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc-c-HHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV-D-LAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~-d-~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
..+|++....|. +.+.++..|++++.+++++++.. + ++..+..+++++++|.+++..|.||.. +. +++
T Consensus 90 ----~~~i~~g~~~~~-~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~--~~---~i~ 159 (355)
T cd00611 90 ----ADYVVTGAWSAK-AAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVE--FD---EVP 159 (355)
T ss_pred ----EEEEECCHHHHH-HHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEE--cc---eec
Confidence 223444322222 34467888999999998654333 4 333334567889999999999999997 22 455
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC-C
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG-G 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g-g 377 (435)
+.||++++||++++.+. .++|+...++ ...+.||+ +||.|+|+++++++.+.+.. ...+.+.. .
T Consensus 160 ~~~g~~~~VDa~qs~g~-----------~~idv~~~~~--~~ss~~K~-lGP~G~g~l~~~~~~~~~~~-~~~~~~~~~~ 224 (355)
T cd00611 160 DTGGVPLVADMSSNILS-----------RPIDVSKFGV--IYAGAQKN-LGPAGVTVVIVRKDLLGKAR-KITPSMLNYK 224 (355)
T ss_pred ccCCCeEEEEccccccC-----------CCCCHHHhCE--EEeecccc-cCCCceEEEEECHHHHhhcc-cCCCCcccHH
Confidence 56999999999986543 3777766554 44669997 68999999888775443211 11111110 0
Q ss_pred C-CCCCccccCCCchHHHHHHHHHHHhcHH-HHHH---HHHHHHHHHHHHHHhcCC
Q psy10210 378 N-YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVW---ICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 378 ~-~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~---~~~~~~~~~~~~~~~l~~ 428 (435)
. .......++.+...+.++.++++.+..+ |+.+ +.+++.+.+.+.++++++
T Consensus 225 ~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g 280 (355)
T cd00611 225 THADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG 280 (355)
T ss_pred HHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 0 0111224566666777888888876544 4544 444555555555555544
No 169
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=2.6e-18 Score=171.54 Aligned_cols=160 Identities=16% Similarity=0.207 Sum_probs=125.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp 253 (435)
.++++.++++.|.+. . +++++|+.++.+++. +..+++. |+++++.|++. ...++..|++++.++
T Consensus 57 ~~le~~lA~l~g~~~--~-v~~~sG~~ai~~~l~-~l~~Gd~--------Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 124 (390)
T PRK08064 57 EALEDIIAELEGGTK--G-FAFASGMAAISTAFL-LLSKGDH--------VLISEDVYGGTYRMITEVLSRFGIEHTFVD 124 (390)
T ss_pred HHHHHHHHHHhCCCC--e-EEECCHHHHHHHHHH-HhCCCCE--------EEEccCccchHHHHHHHHHHHcCCEEEEEC
Confidence 345567788888753 3 455666889988886 5555655 99999988753 355667899999998
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+... .+. .
T Consensus 125 ~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---------~~~---~ 187 (390)
T PRK08064 125 MT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQ---------KPL---D 187 (390)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCccccc---------Cch---h
Confidence 63 789999999999999999999999999999999999999999999999998754321 122 3
Q ss_pred CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
.|+|+++.|+||+..|+.| .|+++++++++.+.
T Consensus 188 ~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~ 222 (390)
T PRK08064 188 LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQK 222 (390)
T ss_pred hCCcEEEeecceeccCCccceeEEEEeCCHHHHHH
Confidence 4789999999999777776 47777776665543
No 170
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=4e-18 Score=170.10 Aligned_cols=159 Identities=23% Similarity=0.253 Sum_probs=124.8
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g~~v~~vp~ 254 (435)
++++.++++.|.+. .+++++|++|+.+++.++.++++. |+++++.|.+....+. ..|++++.++.
T Consensus 65 ~Le~~lA~~~g~~~---~i~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 65 ALEEQLAALEGGAY---GRAFSSGMAATDCLLRAVLRPGDH--------IVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred HHHHHHHHHhCCCc---eEEeCCHHHHHHHHHHHHhCCCCE--------EEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 34456777777654 355567799999999999887776 9999999997544332 35777777764
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+.+.. ..++ ..
T Consensus 134 -----~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~---------~~p~---~~ 196 (388)
T PRK07811 134 -----SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL---------QQPL---AL 196 (388)
T ss_pred -----CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc---------CCch---hh
Confidence 489999999999999999999999999999999999999999999999999875432 1122 24
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
|+|+++.|++|++.+|.+ .|+++.+++++.+
T Consensus 197 gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~ 229 (388)
T PRK07811 197 GADVVVHSTTKYIGGHSDVVGGALVTNDEELDE 229 (388)
T ss_pred CCcEEEecCceeecCCCCcEEEEEEECCHHHHH
Confidence 789999999999766644 4777777766544
No 171
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.79 E-value=4.7e-18 Score=166.51 Aligned_cols=179 Identities=18% Similarity=0.217 Sum_probs=141.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~ 257 (435)
.++++.+++.+|..+.+++++++|++|.+.+.+++++.+++. |+++.|+|..|...++..|++++.+|.++
T Consensus 60 ~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~--------vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~- 130 (356)
T COG0079 60 RELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDT--------VLIPEPTFSMYEIAAQLAGAEVVKVPLKE- 130 (356)
T ss_pred HHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCE--------EEEcCCChHHHHHHHHhcCCeEEEecccc-
Confidence 455666777777334348999999999999999999998887 99999999999999999999999999987
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCC-CC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LP 334 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~ 334 (435)
+..|++.+.+++.+++++|++++||||||..-+.++|.+++..- +.++++||+|..|.-+. ..... ..
T Consensus 131 ~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~---------~~~l~~~~ 201 (356)
T COG0079 131 FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPES---------SLELLKYP 201 (356)
T ss_pred cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCch---------hhhhccCC
Confidence 99999999999999999999999999999996666666665543 88999999999875410 11111 11
Q ss_pred CccEEEecCCC-CCCccCCcEEEEEeCCccccccccccCCCC
Q psy10210 335 GVTSISVDTHK-YGFTPKGSSVVLYRDLKYKHCQYFVTSDWP 375 (435)
Q Consensus 335 gvd~~~~s~hK-~~~~p~g~g~il~~~~~~~~~~~~~~~~~~ 375 (435)
.--++.=++.| ||+++..+|+ .+.++++........++|.
T Consensus 202 ~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~ 242 (356)
T COG0079 202 PNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFN 242 (356)
T ss_pred CCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCC
Confidence 21345557889 6677788999 7788887766555566664
No 172
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.79 E-value=1.8e-17 Score=165.68 Aligned_cols=251 Identities=13% Similarity=0.056 Sum_probs=164.6
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++.+++.+.+..+...++ .+....+......++++.++++++. + +.+++++|++++..++.++.++++.
T Consensus 55 ~~~v~~a~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~--~-~~i~~~~g~~~~~~~l~~~~~~gd~----- 125 (385)
T PRK05958 55 HPRLIAAAQQAARRYGAGSG-GSRLVTGNSPAHEALEEELAEWFGA--E-RALLFSSGYAANLAVLTALAGKGDL----- 125 (385)
T ss_pred CHHHHHHHHHHHHhcCCCCC-CcCcccCCcHHHHHHHHHHHHHhCC--C-cEEEECcHHHHHHHHHHHhCCCCCE-----
Confidence 57788888888765432211 1122223455677788889998874 2 4566667788888888777666665
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
|++++++|+++..++...|++++.+|. .|++++++.+++ ++.++++.+++|++|...++++|.++|++|
T Consensus 126 ---V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~ 197 (385)
T PRK05958 126 ---IVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRH 197 (385)
T ss_pred ---EEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHh
Confidence 999999999999999999999988874 378899998865 367777778999999999999999999999
Q ss_pred CCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 302 GIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 302 ~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
|+++|+|++|+.+.+.. .|..... ........+++..|+||++ ++.| |++ +.++++.+........+.
T Consensus 198 ~~~li~De~~~~g~~~~---~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G-g~~-~~~~~~~~~~~~~~~~~~----- 266 (385)
T PRK05958 198 GAWLLVDEAHGTGVLGP---QGRGLAAEAGLAGEPDVILVGTLGKAL-GSSG-AAV-LGSETLIDYLINRARPFI----- 266 (385)
T ss_pred CCEEEEECcccccccCC---CCCchHHhhCCCCCCceEEEEechhhc-ccCC-cEE-EcCHHHHHHHHHhCccce-----
Confidence 99999999997654321 1111111 1122222357778899994 6666 664 445554432111111111
Q ss_pred CCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210 381 SPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l 426 (435)
..++.+....++++++++.+.. +...+++.+..+.+.+.++.+
T Consensus 267 ---~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 267 ---FTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRAL 310 (385)
T ss_pred ---ecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 1112223344566667766543 355666666666666666653
No 173
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=1.1e-17 Score=167.58 Aligned_cols=162 Identities=17% Similarity=0.175 Sum_probs=123.5
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC----------CccccHHH
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS----------SYTVDLAA 264 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~----------~~~~d~~~ 264 (435)
.+++|+||++|+.+++.++.++||. | +++|.|.++...+...|++++.+++++ .|.+|+++
T Consensus 70 ~vv~t~~Gt~Al~la~~al~~pGD~--------V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~ 140 (431)
T cd00617 70 HIIPTHQGRGAENILFSILLKPGRT--------V-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAK 140 (431)
T ss_pred eEEEcCCHHHHHHHHHHHhCCCCCE--------E-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHH
Confidence 6899999999999999999887765 6 688999999999999999999999862 24599999
Q ss_pred HHHHhhcC----ceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhccc--ccCCCCCCCC-C--
Q psy10210 265 LQSAITGN----TVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMS--AAGYPLPPFD-F-- 331 (435)
Q Consensus 265 l~~~i~~~----~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~--~~g~~~~~~d-~-- 331 (435)
++++|+++ +++|+++.|+||+ |.+ +++++|.++|++||++||.|+++...-..|.+ ..|+...++. .
T Consensus 141 Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~ 220 (431)
T cd00617 141 LEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAR 220 (431)
T ss_pred HHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHH
Confidence 99999865 7899999999998 777 56788999999999999999996532221211 1122111111 0
Q ss_pred C-CCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 332 S-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 332 ~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
. ....|++++|+||.+.+|.| |+++.+++++.+.
T Consensus 221 e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~~~ 255 (431)
T cd00617 221 EMFSYADGCTMSAKKDGLVNIG-GFLALRDDELYEE 255 (431)
T ss_pred HhhccCCEEEEEeecCCCCccc-eEEEeCcHHHHHH
Confidence 0 12369999999998777764 6777777656544
No 174
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.79 E-value=7.3e-18 Score=171.83 Aligned_cols=151 Identities=17% Similarity=0.121 Sum_probs=119.4
Q ss_pred ceEEcCChHHHHHHHHHH-----HHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc--CCEEEEEecCC--C-----ccc
Q psy10210 195 CGCMTSGGTESIMMACKA-----YRDYAREEKGISLPEIVLPTTAHPAFDKAANYF--GMKVKHIRLTS--S-----YTV 260 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a-----~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~--g~~v~~vp~~~--~-----~~~ 260 (435)
++++|+|+++|+..++.+ +.++||. |++++|+|+.+...++.. |++++.++.+. + +.+
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~--------Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~ 228 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDK--------IALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQY 228 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCE--------EEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCC
Confidence 799999999999999887 4566665 999999999999998876 67777777752 2 789
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
|+++++++++++++++++++|+||||.+ +.+++|+++|++| +++||+|++|+.|...+. . .... .+.
T Consensus 229 d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~---s----l~~~-~~~ 300 (521)
T TIGR03801 229 PDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFR---S----LFAE-LPY 300 (521)
T ss_pred CHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccccc---c----hhhh-CCC
Confidence 9999999988899999999999999999 5688899999987 999999999998764211 0 1111 223
Q ss_pred ccEEEecCCCCC-CccCCcEEEEEeCC
Q psy10210 336 VTSISVDTHKYG-FTPKGSSVVLYRDL 361 (435)
Q Consensus 336 vd~~~~s~hK~~-~~p~g~g~il~~~~ 361 (435)
-.+++.|+.|.. .....+|+++..++
T Consensus 301 ~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 301 NTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred CEEEEEcchhhccCchhhhhhhhcCch
Confidence 457777899984 24466899776554
No 175
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.79 E-value=1.7e-17 Score=165.85 Aligned_cols=251 Identities=13% Similarity=0.038 Sum_probs=164.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|.+.+++.+.+.+.... ...+....+..++..++++.+++++|.+ .++++|+| ++++..++.++.++++.
T Consensus 48 ~~~~~~~a~~~~~~~~~~~-~~~~~~~~g~~~l~~~l~~~l~~~~g~~--~~i~~~sG-~~a~~~a~~~~~~~gd~---- 119 (385)
T TIGR01825 48 DHPRLKEAAAQAIQQYGVG-AGAVRTIAGTLRLHEELEEKLAKFKKTE--AALVFQSG-FNTNQGVLSALLRKGDI---- 119 (385)
T ss_pred CCHHHHHHHHHHHHHcCCC-CCccCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcH-HHHHHHHHHHhCCCCCE----
Confidence 3677777777776543211 1222234456677778888888888753 25666655 78888888888776665
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
|+++++.|+++...+...|+++..++ .+|++++++.+.+ ++++|++++++||+|.+.++++|.++|+
T Consensus 120 ----vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~ 190 (385)
T TIGR01825 120 ----VLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAE 190 (385)
T ss_pred ----EEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHH
Confidence 99999999999888888888877664 3678888887753 6889999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCC-CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYP-LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~-~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
+||+++|+|++|+.+.+.. .+.+ ...++.. .++|++..+++|++ ++.| |++ +.++++.+........+..+
T Consensus 191 ~~~~~li~De~~~~~~~~~---~~~~~~~~~~~~-~~~~i~~~s~sK~~-~~~g-G~~-~~~~~~~~~~~~~~~~~~~~- 262 (385)
T TIGR01825 191 RYGAVTYVDDAHGSGVMGE---AGRGTVHHFGLE-DKVDIQVGTLSKAI-GVVG-GYA-AGHKELIEYLKNRARPFLFS- 262 (385)
T ss_pred HhCCEEEEECcccccCcCC---CCCccHhhcCCC-cCCcEEEEeccHHh-hcCC-CEE-ecCHHHHHHHHHhCcccccc-
Confidence 9999999999997665421 1110 0112332 56788999999995 5544 664 44455443321111112111
Q ss_pred CCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhc
Q psy10210 379 YGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 379 ~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+..+....+++.+++..+. .....++.++..+.+.+.++++
T Consensus 263 -------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 263 -------TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred -------CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 1112222334555555442 2345666666667676666654
No 176
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=4.6e-18 Score=169.12 Aligned_cols=160 Identities=18% Similarity=0.161 Sum_probs=125.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~ 254 (435)
++++.++++.|. +++++|+||++|+.+++.++.++++. |+++.|.|.+....+ ...++++..++.
T Consensus 55 ~le~~lA~l~g~---~~v~~~~gg~~Ai~~~l~all~~GD~--------Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 55 LLQQALAELEGG---AGAVVTNTGMSAIHLVTTALLGPDDL--------LVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred HHHHHHHHHhCC---CcEEEEcCHHHHHHHHHHHHcCCCCE--------EEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 345567777763 36899999999999999999877776 999999998754433 223556655542
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||||.+.++++|.++|+++|+++++|++|+.+... .++ ..
T Consensus 124 -----~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~---------~pl---~~ 186 (382)
T TIGR02080 124 -----GDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQ---------NPL---AL 186 (382)
T ss_pred -----CCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccC---------Cch---hh
Confidence 3789999999999999999999999999999999999999999999999999754321 122 23
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
|+|+++.|++||+.|+.+ .|+++.+++++.+.
T Consensus 187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~ 220 (382)
T TIGR02080 187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE 220 (382)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCCHHHHHH
Confidence 789999999999777665 67767777765443
No 177
>PLN02822 serine palmitoyltransferase
Probab=99.78 E-value=1.6e-17 Score=170.00 Aligned_cols=261 Identities=14% Similarity=0.086 Sum_probs=176.4
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++++++.+.+.++... ...+..+-+..+...++++.++++++.+ +.+++++|++ ++..++.++.++++.
T Consensus 124 ~~~~i~ea~~~al~~~G~g-~~g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s~G~~-a~~sai~a~~~~gd~---- 195 (481)
T PLN02822 124 GNEKIKESCTSALEKYGVG-SCGPRGFYGTIDVHLDCETKIAKFLGTP--DSILYSYGLS-TIFSVIPAFCKKGDI---- 195 (481)
T ss_pred CCHHHHHHHHHHHHHhCCC-CcccCccccCHHHHHHHHHHHHHHhCCC--CEEEECCHHH-HHHHHHHHhCCCCCE----
Confidence 5899999999999886432 2223334456777888889999999864 3688888776 678888888777665
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC--CccccHHHHHHHhh--cCc-eEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS--SYTVDLAALQSAIT--GNT-VMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~--~~~~d~~~l~~~i~--~~~-~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
|++....|.++..++...|.+++.++.++ ++..+++++++... +++ ++|+++.+++++|.+.++++|.++|
T Consensus 196 ----Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~ 271 (481)
T PLN02822 196 ----IVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLK 271 (481)
T ss_pred ----EEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHH
Confidence 88898899999899999999999998652 12222333322221 234 7999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg 377 (435)
++||+++++||+|+.+++ +..|.+.. -++.....+|+++.|++|. ++..| |+++ .++++.+.+..... +
T Consensus 272 ~k~~~~LIvDEa~s~gvl---G~~G~G~~e~~~v~~~~~dii~~s~sKa-lg~~G-G~i~-g~~~ii~~~~~~~~---~- 341 (481)
T PLN02822 272 EKYRFRVLLDESNSFGVL---GKSGRGLSEHFGVPIEKIDIITAAMGHA-LATEG-GFCT-GSARVVDHQRLSSS---G- 341 (481)
T ss_pred HHcCCEEEEECCcccccc---CCCCCChHHHcCCCCCCCeEEEecchhh-hhhCC-eEEE-cCHHHHHHHHhcCC---c-
Confidence 999999999999985544 22222211 1112123579999999999 46665 7744 55555544321111 1
Q ss_pred CCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210 378 NYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNLSDLW 430 (435)
Q Consensus 378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l~~l~ 430 (435)
.+..++.+....+++.++++.+.. +...+++++..+.+.+.+++++++.
T Consensus 342 ----~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~ 391 (481)
T PLN02822 342 ----YVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLS 391 (481)
T ss_pred ----eeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 122333344444455567766544 5667777888888888777765543
No 178
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.78 E-value=7.5e-18 Score=168.22 Aligned_cols=164 Identities=20% Similarity=0.178 Sum_probs=126.0
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S 256 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~ 256 (435)
++++.+++++|.. ..++++|||+|+.+++.++ ..+++. |++++++|.++..++...|++++.++++ +
T Consensus 33 ~le~~la~~~g~~---~~v~~~sgt~al~~~l~al~~~~Gd~--------Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~ 101 (380)
T TIGR03588 33 AFEEALAEYVGAK---YAVAFNSATSALHIACLALGVGPGDR--------VWTTPITFVATANCALYCGAKVDFVDIDPD 101 (380)
T ss_pred HHHHHHHHHHCCC---eEEEEcCHHHHHHHHHHHcCCCCCCE--------EEeCCcchHHHHHHHHHcCCEEEEEecCCC
Confidence 3445566667664 3466678999999999988 455655 9999999999999999999999999997 5
Q ss_pred CccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 257 SYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 257 ~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
++.+|+++++++++ ++|++|++++ ++|...++++|.++|++||+++|+|++++.+.. +. + .++..
T Consensus 102 ~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~-~~---~---~~~g~- 170 (380)
T TIGR03588 102 TGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAALAKKHGLKIIEDASHALGAE-YG---G---KPVGN- 170 (380)
T ss_pred cCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHHHHHcCCEEEEECCCcccCc-cC---C---EeCCC-
Confidence 77899999999998 7889888654 589999999999999999999999999976532 11 1 01110
Q ss_pred CCCccEEEecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210 333 LPGVTSISVDTH--KYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 333 ~~gvd~~~~s~h--K~~~~p~g~g~il~~~~~~~~ 365 (435)
....|..++|+| |++..+.| |+++++++++.+
T Consensus 171 ~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~~ 204 (380)
T TIGR03588 171 CRYADATVFSFHPVKIITTAEG-GAVTTNDEELAE 204 (380)
T ss_pred ccccceEEEecCCCCcccccCc-eEEEECCHHHHH
Confidence 012389999988 88655544 666777776554
No 179
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=8.2e-18 Score=166.85 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=122.3
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCC
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTS 256 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~ 256 (435)
.+.++++.|.+ .+++++||++|+..++.++.+++|. |+++++.|++.... .+..|+++..++.+
T Consensus 56 E~~lA~l~g~~---~~~~~~sG~~Ai~~al~all~~GD~--------Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~- 123 (377)
T TIGR01324 56 QDAMCELEGGA---GCYLYPSGLAAVTNSILAFVKAGDH--------VLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL- 123 (377)
T ss_pred HHHHHHHhCCC---cEEEECcHHHHHHHHHHHhcCCCCE--------EEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC-
Confidence 34566666653 6788999999999999999887776 99999999886543 35568888777532
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
+.++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.... ..++ ..|+
T Consensus 124 ----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~---------~~pl---~~ga 187 (377)
T TIGR01324 124 ----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL---------FKPL---EHGV 187 (377)
T ss_pred ----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---------cCcc---ccCc
Confidence 23789999999999999999999999999999999999999999999999975433 1133 4589
Q ss_pred cEEEecCCCCCCccCC--cEEEEEeCCccc
Q psy10210 337 TSISVDTHKYGFTPKG--SSVVLYRDLKYK 364 (435)
Q Consensus 337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~ 364 (435)
|+++.|.+||+.|+.+ .|+ ++.+++..
T Consensus 188 Divv~S~tK~l~G~~d~~gG~-v~~~~~~~ 216 (377)
T TIGR01324 188 DISIQAGTKYLVGHSDIMIGT-VVANARTW 216 (377)
T ss_pred eEEEecCceeccCCCCceEEE-EEeCHHHH
Confidence 9999999999777654 355 44555443
No 180
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=4.3e-18 Score=169.29 Aligned_cols=159 Identities=17% Similarity=0.206 Sum_probs=126.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp 253 (435)
.++++.+++++|.+ .++++++|+.|+.+++. +.++++. |+++++.|.++.. .+...|++++.++
T Consensus 50 ~~le~~la~l~g~~---~~l~~~sG~~al~~~l~-ll~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd 117 (378)
T TIGR01329 50 TALESLLAKLDKAD---RAFAFSSGMAALDVITR-LLNNGDE--------IIAGDDLYGGTDRLLTQVVPRSGVVVVHVD 117 (378)
T ss_pred HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHH-HhCCCCE--------EEEcCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 45566777888773 45677777889887765 5566655 9999999988654 4566799999998
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
++ |+++++++++++|++|++++|+||+|.+.|+++|+++|++||+++++|++++.... ..+++
T Consensus 118 ~~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~---------~~~l~--- 180 (378)
T TIGR01329 118 TT-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL---------CNPLE--- 180 (378)
T ss_pred CC-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc---------CChhh---
Confidence 63 78999999999999999999999999999999999999999999999999854321 12332
Q ss_pred CCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
.|+|+++.|.|||++||.+ .|+++.+++++.+
T Consensus 181 ~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~ 214 (378)
T TIGR01329 181 LGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAK 214 (378)
T ss_pred cCCcEEEEecceeccCCccceeEEEEeCcHHHHH
Confidence 3889999999999888766 7887777766533
No 181
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=5.1e-18 Score=168.47 Aligned_cols=201 Identities=14% Similarity=0.054 Sum_probs=141.8
Q ss_pred HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEecCCC
Q psy10210 182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRLTSS 257 (435)
Q Consensus 182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~~~~ 257 (435)
+.++++.+.. ++++++||++|+..++.++.+++|. |+++++.|.++... ...+|+++..++.+
T Consensus 68 ~~iA~le~~~---~~~~~~sG~~Ai~~~l~all~~GD~--------Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-- 134 (394)
T PRK09028 68 AAIVELEGGA---GTALYPSGAAAISNALLSFLKAGDH--------LLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-- 134 (394)
T ss_pred HHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEECCCcHHHHHHHHHhhhhcceEEEEECCC--
Confidence 4455555442 5789999999999999999888877 99999999886653 34568888777532
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
+.+.++++++++|++|++++|+||+|.+.++++|+++|+++|+++++|++|+..+. ..|+ ..|+|
T Consensus 135 ---~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~---------~~Pl---~~GaD 199 (394)
T PRK09028 135 ---IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN---------SRPF---EMGVD 199 (394)
T ss_pred ---CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc---------CCcc---ccCce
Confidence 45789999999999999999999999999999999999999999999999975321 1244 45999
Q ss_pred EEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210 338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415 (435)
Q Consensus 338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~ 415 (435)
++..|.|||+.|+.+ .|+ ++.++++.+..... ....|. .. ..-.+|..++- ...+.-|+++.
T Consensus 200 ivv~S~tK~l~Gh~d~~~G~-~~~~~~~~~~l~~~-~~~~G~----------~~--~p~~a~l~~rg--l~TL~lR~~~~ 263 (394)
T PRK09028 200 ISIQAATKYIVGHSDVMLGT-ATANEKHWDQLREH-SYLMGQ----------CT--SPDDVYLAMRG--LRTLGVRLAQH 263 (394)
T ss_pred EEEEeCCeEecCCCCEEEEE-EECCHHHHHHHHHH-HHhcCC----------CC--CHHHHHHHHcc--cCcHHHHHHHH
Confidence 999999999877743 254 45655543321111 111121 11 11356655544 44566666666
Q ss_pred HHHHHHHHHhc
Q psy10210 416 HFNYKSCLQNL 426 (435)
Q Consensus 416 ~~~~~~~~~~l 426 (435)
.+.+....+.|
T Consensus 264 ~~na~~la~~L 274 (394)
T PRK09028 264 EKNALKVANWL 274 (394)
T ss_pred HHHHHHHHHHH
Confidence 66655554443
No 182
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=3.2e-18 Score=170.93 Aligned_cols=160 Identities=18% Similarity=0.156 Sum_probs=128.4
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~ 254 (435)
++++.++++.|.+ .+++++||++|+.+++.++.++++. |+++++.|.++.. .+...|++++.++.
T Consensus 69 ~Le~~lA~l~g~~---~~l~~~sgt~Ai~~~l~al~~~GD~--------Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 69 ALAQRLAEIEGGR---HALLQPSGLAAISLVYFGLVKAGDD--------VLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred HHHHHHHHHhCCC---eEEEeccHHHHHHHHHHHHhCCCCE--------EEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 3445677777753 6899999999999999999877776 9999999998653 56677999988864
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
. +.++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+.... ......
T Consensus 138 ~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~------------~~~l~~ 200 (394)
T PRK07050 138 L-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA------------FKPFEH 200 (394)
T ss_pred C-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc------------cCHHHc
Confidence 2 45788999999999999999999999999999999999999999999999865432 122234
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
|+|+.+.|.+|+..+..+ .|+++.+++++.+.
T Consensus 201 GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~ 234 (394)
T PRK07050 201 GVDISVQALTKYQSGGSDVLMGATITADAELHAK 234 (394)
T ss_pred CCeEEEEECCceecCCCCeeEEEEEECCHHHHHH
Confidence 789999999999755544 57777777766543
No 183
>KOG2862|consensus
Probab=99.78 E-value=1.5e-17 Score=152.36 Aligned_cols=261 Identities=15% Similarity=0.133 Sum_probs=203.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
|+..+...+.+++.. |.-.+.+|.+.++..++.+-+...|....+.-.++..+|+.+.+.|+..+..++|.
T Consensus 24 GPsnl~~~V~~A~~~-----~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~---- 94 (385)
T KOG2862|consen 24 GPSNLSGRVQEAMSR-----PSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDN---- 94 (385)
T ss_pred CCcCCCHHHHHhhcC-----CccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCe----
Confidence 333444555555543 44446678888999999999998888776666788888999999999999998887
Q ss_pred CCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccC-HHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDD-IGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~-i~~i~~la~ 299 (435)
|++....-.+ +.+.+++.|++|..|+.+....+.++.+.+.+.. +++++++++..+.||+..| ++.+.++|+
T Consensus 95 ----vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~ 170 (385)
T KOG2862|consen 95 ----VLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCH 170 (385)
T ss_pred ----EEEEEechHHHHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhh
Confidence 8877776555 6677899999999999887788999999999976 5799999999999999977 788899999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc---c-----ccccc
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH---C-----QYFVT 371 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~---~-----~~~~~ 371 (435)
+|+++++||.+-+- +..+|.+.++|||+....++|.+.+|.|.|++.++++.+.. . .+++.
T Consensus 171 k~~~lllVD~VaSl-----------ggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd 239 (385)
T KOG2862|consen 171 KHEALLLVDTVASL-----------GGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFD 239 (385)
T ss_pred cCCeEEEEechhhc-----------CCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEe
Confidence 99999999998543 33478888999999999999999999999998888875421 1 22233
Q ss_pred CCCCCCCC---CCCcc-ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 372 SDWPGGNY---GSPSV-SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 372 ~~~~gg~~---~~~~~-~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
..|.+-.| +.+.. ..+.+...+.+..++|..+-++|+.+.++++.+..+.+...+++
T Consensus 240 ~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~ 300 (385)
T KOG2862|consen 240 ILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEA 300 (385)
T ss_pred HHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333222 22222 24556667778889999999999999999999988877666554
No 184
>PLN02242 methionine gamma-lyase
Probab=99.78 E-value=3.5e-18 Score=171.62 Aligned_cols=158 Identities=15% Similarity=0.134 Sum_probs=124.5
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH-----HHcCCEEEEEe
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA-----NYFGMKVKHIR 253 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~-----~~~g~~v~~vp 253 (435)
++.+.+++++|.. .+++|+||++|+.+++.++.++++. |+++.+.|..+...+ +..|++++.++
T Consensus 80 ~LE~~lA~l~g~~---~~l~~~sG~~Ai~~al~al~~~GD~--------Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d 148 (418)
T PLN02242 80 NLGRQMAALEGTE---AAYCTASGMSAISSVLLQLCSSGGH--------VVASNTLYGGTHALLAHFLPRKCNITTTFVD 148 (418)
T ss_pred HHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEcCCcHHHHHHHHHHhhhhccCceEEEcC
Confidence 4455778888775 4578999999999999999888877 999999998876654 34687877776
Q ss_pred cCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
. .|++++++++++ ++++|++++|+||||.+.++++|.++|++||+++|+|++|+.+.. +..
T Consensus 149 ~-----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~-------------~~~ 210 (418)
T PLN02242 149 I-----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL-------------SPA 210 (418)
T ss_pred C-----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC-------------CHH
Confidence 4 289999999988 499999999999999999999999999999999999999965432 112
Q ss_pred CCCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 333 LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
..|+|+++.|++|+..++.. .|+ ++.++++.+.
T Consensus 211 ~~g~divv~S~SK~l~g~g~~~gG~-iv~~~~li~~ 245 (418)
T PLN02242 211 RLGADVVVHSISKFISGGADIIAGA-VCGPAELVNS 245 (418)
T ss_pred HcCCcEEEEeCccccCCCCCceEEE-EEcCHHHHHH
Confidence 23689999999999544432 366 4455555443
No 185
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=5e-18 Score=169.04 Aligned_cols=158 Identities=18% Similarity=0.134 Sum_probs=125.2
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH---HHcCCEEEEEecCC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA---NYFGMKVKHIRLTS 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~---~~~g~~v~~vp~~~ 256 (435)
+++.+++++|.+ .+++++||++|+..++.++..+++. |+++.+.|.+....+ ...|++++.++
T Consensus 58 lE~~lA~l~g~~---~~l~~~sG~~Ai~~~l~~ll~~GD~--------Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~--- 123 (385)
T PRK08574 58 LEEALAKLEGGV---DALAFNSGMAAISTLFFSLLKAGDR--------VVLPMEAYGTTLRLLKSLEKFGVKVVLAY--- 123 (385)
T ss_pred HHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHHhCCCCE--------EEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence 445677777753 5678899999999999998877776 999999999977665 34577776653
Q ss_pred CccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 257 SYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
+|++++++++++ ++++|++++|+||+|.+.|+++|.++|+++|+++++|++++..+. ..+. ..|
T Consensus 124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~---------~~~l---~~G 188 (385)
T PRK08574 124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLL---------YRPL---RHG 188 (385)
T ss_pred ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---hhC
Confidence 368899999988 899999999999999999999999999999999999999864322 1122 357
Q ss_pred ccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
+|+++.|++|++.||.. .|+++++++++.+.
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~ 221 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEE 221 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECcHHHHHH
Confidence 89999999999766643 36567777765443
No 186
>PLN02672 methionine S-methyltransferase
Probab=99.78 E-value=2.2e-17 Score=178.57 Aligned_cols=165 Identities=14% Similarity=0.151 Sum_probs=125.3
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG 271 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~ 271 (435)
+++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|++ +++.+|++++++++.+
T Consensus 755 e~IIvt~Gs~elL~lll~aLl~pGD~--------VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~ 826 (1082)
T PLN02672 755 TEFVYGDTSLALFNKLVLCCVQEGGT--------LCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLET 826 (1082)
T ss_pred CEEEEeCCHHHHHHHHHHHHcCCCCE--------EEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence 47999999999999999999988887 9999999999999999999999999996 3678999999999976
Q ss_pred -CceEEEEeCCC-CCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC--CCCC--C-CccEEEe
Q psy10210 272 -NTVMLVGSMPN-FPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF--DFSL--P-GVTSISV 341 (435)
Q Consensus 272 -~~~~v~~~~p~-nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~--d~~~--~-gvd~~~~ 341 (435)
+++++++++|| ||||.+ +.+++|+++|++||++||+|++|+++.+...........+. .+.. + ...++..
T Consensus 827 ~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~ 906 (1082)
T PLN02672 827 VKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLG 906 (1082)
T ss_pred CCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEe
Confidence 45689999997 999999 78999999999999999999999977652100000000000 0000 0 1234455
Q ss_pred cCCC-CCCccCCcEEEEEeCCccccc
Q psy10210 342 DTHK-YGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 342 s~hK-~~~~p~g~g~il~~~~~~~~~ 366 (435)
|+.| ++.++..+|+++..++++.+.
T Consensus 907 SfSKkf~lpGLRIGylIap~~eLi~~ 932 (1082)
T PLN02672 907 GLSTELLSGGHEFGFLALNDSVLIDA 932 (1082)
T ss_pred CcHHhhccHHHHheeEEeCCHHHHHH
Confidence 7775 555567789977666555543
No 187
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.78 E-value=2.6e-17 Score=162.82 Aligned_cols=251 Identities=14% Similarity=0.062 Sum_probs=160.8
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++.+++.+.+..+..... .+....+......++++.++++++.+ +.+++++| ++++..++.++.++++.
T Consensus 32 ~~~v~~a~~~~~~~~~~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~G-~~~~~~~l~~~~~~gd~----- 102 (360)
T TIGR00858 32 HPEVIQAAQQGAEQYGAGST-ASRLVSGNSPLHEELEEELAEWKGTE--AALLFSSG-YLANVGVISALVGKGDL----- 102 (360)
T ss_pred CHHHHHHHHHHHHhcCCCCC-CcCcccCCcHHHHHHHHHHHHHhCCC--CEEEECch-HHHHHHHHHHhCCCCCE-----
Confidence 46777777776654321110 01111222345566777788877743 25566555 67777777777666555
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
|++++|+|+++...++..|++++.++. +|++++++.+++ +++++++.+++|++|.+.++++|.++|++
T Consensus 103 ---v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~ 174 (360)
T TIGR00858 103 ---ILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAER 174 (360)
T ss_pred ---EEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHH
Confidence 999999999999999999999988873 588899988864 47899999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
+|+++|+|++|+.+.+.. .+.+.. ..+....+.+++..|++|+ +++.| |+++ .++++.+........|.
T Consensus 175 ~~~~li~De~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~s~sK~-~~~~g-G~~~-~~~~~~~~~~~~~~~~~---- 244 (360)
T TIGR00858 175 YGAWLMVDDAHGTGVLGE---DGRGTLEHFGLKPEPVDIQVGTLSKA-LGSYG-AYVA-GSQALIDYLINRARTLI---- 244 (360)
T ss_pred cCcEEEEECcccccCcCC---CCCchHHhcCCCccCCcEEEEechhh-hhccC-cEEE-cCHHHHHHHHHhCccce----
Confidence 999999999997654321 011100 1122223578889999998 56666 7744 45554433111111111
Q ss_pred CCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHhc
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~~l 426 (435)
..++.+...++++.++++.+.. +...++.++..+.+.+.++++
T Consensus 245 ----~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 245 ----FSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred ----ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 1112222333455566654432 345666777777777776664
No 188
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.78 E-value=7.9e-18 Score=168.08 Aligned_cols=160 Identities=16% Similarity=0.152 Sum_probs=125.5
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~ 254 (435)
++++.+++++|.+. .+++++|+.|+.+++.++..+++. |+++.+.|.+ +...+...|++++.+++
T Consensus 63 ~le~~lA~l~g~~~---av~~~sG~~Ai~~~l~al~~~Gd~--------Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 63 NLEGRIAFLEGTEA---AVATSSGMGAIAATLLTILKAGDH--------LISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred HHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCE--------EEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 34457788887753 578888899999999988777776 9999998765 44555667999988886
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+.. + .++ ..
T Consensus 132 ~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~------~---~~~---~~ 194 (391)
T TIGR01328 132 A-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPML------T---NPV---AL 194 (391)
T ss_pred C-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhcc------C---Cch---hc
Confidence 4 78999999999999999999999999999999999999999999999999975432 1 122 34
Q ss_pred CccEEEecCCCCCCccCC-cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG-SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g-~g~il~~~~~~~~~ 366 (435)
++|+++.|++|++.++.+ .|.+++.++++.+.
T Consensus 195 g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~ 227 (391)
T TIGR01328 195 GVDVVVHSATKYIGGHGDVVAGLICGKAELLQQ 227 (391)
T ss_pred CCCEEEccccccccCCCCceEEEEEcCHHHHHH
Confidence 789999999999655433 23346666665543
No 189
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.6e-17 Score=164.41 Aligned_cols=156 Identities=14% Similarity=0.175 Sum_probs=116.7
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHH
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSA 268 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~ 268 (435)
+++ ++++|+|+++++.++++++.++++. |++++|+|..+...+...|++++.+|++ +++.+|++++++.
T Consensus 81 ~~~-~I~it~G~~~al~~~~~~~~~~gd~--------V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~ 151 (357)
T PRK14809 81 SPE-QVWLANGGDGALDYLARAMLDPGDT--------VLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDA 151 (357)
T ss_pred Ccc-eEEECCCHHHHHHHHHHHhcCCCCE--------EEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHh
Confidence 443 8999999999999999999888877 9999999999998899999999999986 3467788888776
Q ss_pred hhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEecCCC
Q psy10210 269 ITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVDTHK 345 (435)
Q Consensus 269 i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s~hK 345 (435)
. ++++++++++||||||.+-+.+++.++++.. ++++|+||+|+.+... + .... .....-.++..|+.|
T Consensus 152 ~-~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~-----~---~~~~~~~~~~~vi~~~SfSK 222 (357)
T PRK14809 152 Y-DGERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAER-----P---SAVALVEERDDVAVLRTFSK 222 (357)
T ss_pred h-cCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCC-----c---hhHHHHhhCCCEEEEecchh
Confidence 5 4688999999999999996666666655543 7899999999987531 1 0111 111122455668899
Q ss_pred CCC-ccCCcEEEEEeCCcccc
Q psy10210 346 YGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 346 ~~~-~p~g~g~il~~~~~~~~ 365 (435)
... ....+|+++.. +++.+
T Consensus 223 ~~~~~GlRiG~~~~~-~~~~~ 242 (357)
T PRK14809 223 AYGLAGLRLGYAVVP-EEWAD 242 (357)
T ss_pred HhcCcchhheeeecC-HHHHH
Confidence 843 34678996654 44544
No 190
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=2.3e-17 Score=161.95 Aligned_cols=202 Identities=16% Similarity=0.097 Sum_probs=143.6
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHH
Q psy10210 103 YFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIK 182 (435)
Q Consensus 103 ~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 182 (435)
+..+.|.. .++.++++.+.+.+.... ...| +..|.+++++++++++.
T Consensus 23 l~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~Y-~~~g~~~lr~~ia~~~~------------------------- 69 (337)
T PRK03967 23 LDKNENPF-DLPEELKEEIFEELKRVP------FNRY-PHITSDPLREAIAEFYG------------------------- 69 (337)
T ss_pred ecCCCCCC-CCCHHHHHHHHHHhhcCc------cccC-CCCCHHHHHHHHHHHhC-------------------------
Confidence 33344443 334567777766554311 1122 23467777777776653
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccH
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDL 262 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~ 262 (435)
.++ +++++|+|+++++.+++.++ +++. |++++|+|..+...++..|++++.+|+++++.+|+
T Consensus 70 -------~~~-~~I~~t~G~~~~l~~~~~~~--~gd~--------V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~ 131 (337)
T PRK03967 70 -------LDA-ENIAVGNGSDELISYLVKLF--EGKH--------IVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDG 131 (337)
T ss_pred -------cCc-ceEEEcCCHHHHHHHHHHHh--CCCe--------EEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCH
Confidence 234 38999999999999887765 4555 99999999999999999999999999987788999
Q ss_pred HHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210 263 AALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD 342 (435)
Q Consensus 263 ~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s 342 (435)
+++++.+ ++++++++++|+||||.+-+.++|.++++ +++++|+|++|..|... .. .+. .....-.+++.|
T Consensus 132 ~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~-----~~--~~~-~~~~~~vi~l~S 201 (337)
T PRK03967 132 ERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGK-----SL--IGL-IDEYPNLILLRT 201 (337)
T ss_pred HHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhccc-----ch--HHH-HhhCCCEEEEec
Confidence 9998865 57889999999999999999999999995 79999999999876420 00 011 001112456678
Q ss_pred CCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 343 THKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 343 ~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
+.|... +...+|+++. ++++.+.
T Consensus 202 ~SK~~~l~GlRiG~iv~-~~~~i~~ 225 (337)
T PRK03967 202 FSKAFGLAGIRAGYAIA-NEEIIDA 225 (337)
T ss_pred chHhhcchhhhheeeec-CHHHHHH
Confidence 999843 4467899665 4555443
No 191
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.78 E-value=3.1e-17 Score=162.94 Aligned_cols=163 Identities=19% Similarity=0.188 Sum_probs=122.2
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-C
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-S 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~ 257 (435)
+.+++++++|. +.+++|+|||+|+.+++.++ ..++++ |++++++|.++..++...|++++.+++++ +
T Consensus 36 ~e~~la~~~g~---~~~v~~~sgt~aL~~~l~al~~~pGd~--------Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~ 104 (376)
T TIGR02379 36 CETWLENRTGT---KKALLTPSCTAALEMAALLLDIQPGDE--------VIMPSYTFVSTANAFVLRGAKIVFVDIRPDT 104 (376)
T ss_pred HHHHHHHHhCC---CeEEEeCCHHHHHHHHHHHcCCCCcCE--------EEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 33445555554 26899999999999999887 556665 99999999999999999999999999984 4
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
+.+|+++++++++++|++|+ |+||+|...++++|.++|++||+++|+|++|+.+.. +. |. +.. .. .|
T Consensus 105 ~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~-~~---~~---~~g-~~--~~ 171 (376)
T TIGR02379 105 MNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMST-YK---GR---ALG-SI--GH 171 (376)
T ss_pred CCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCc-cC---Cc---ccC-CC--CC
Confidence 78999999999999999987 566799999999999999999999999999975432 11 11 111 00 14
Q ss_pred EEEecCC--CCCCccCCcEEEEEeCCccccc
Q psy10210 338 SISVDTH--KYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 338 ~~~~s~h--K~~~~p~g~g~il~~~~~~~~~ 366 (435)
+.++|+| |.+......|+++++++++.+.
T Consensus 172 ~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~ 202 (376)
T TIGR02379 172 LGTFSFHETKNYTSGGEGGALLINDQAFIER 202 (376)
T ss_pred EEEEeCCCCCcCcccCCceEEEECCHHHHHH
Confidence 4555544 4432221347778888776554
No 192
>PRK07908 hypothetical protein; Provisional
Probab=99.78 E-value=4.2e-17 Score=160.96 Aligned_cols=149 Identities=13% Similarity=0.079 Sum_probs=110.9
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCc
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNT 273 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~ 273 (435)
+++++|+|+++++.+++. + .+ +. +++..|+|..+...++..|++++.+|+++++.+|++++ .+++
T Consensus 76 ~~I~it~Ga~~al~~~~~-l-~~-~~--------viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~~~~ 140 (349)
T PRK07908 76 DEVLLLAGAAEGFALLAR-L-RP-RR--------AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----PDDA 140 (349)
T ss_pred hhEEECCCHHHHHHHHHh-c-CC-Ce--------EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----ccCC
Confidence 389999999999998887 3 33 23 78889999999999999999999999986678888754 4578
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCC
Q psy10210 274 VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKG 352 (435)
Q Consensus 274 ~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g 352 (435)
+++++++||||||.+-+.++|.++|++ +.++|+|++|+.+.. +. .+++.-....-.++..|++|... .+..
T Consensus 141 ~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~------~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlR 212 (349)
T PRK07908 141 DLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVP------GE-PESLAGDDLPGVLVLRSLTKTWSLAGLR 212 (349)
T ss_pred CEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhcc------CC-ccccccccCCCEEEEeecccccCCccce
Confidence 899999999999999999999999964 789999999987632 11 11111111122344448999632 4456
Q ss_pred cEEEEEeCCccccc
Q psy10210 353 SSVVLYRDLKYKHC 366 (435)
Q Consensus 353 ~g~il~~~~~~~~~ 366 (435)
+|+++. ++++.+.
T Consensus 213 iG~~~~-~~~~~~~ 225 (349)
T PRK07908 213 VGYALG-APDVLAR 225 (349)
T ss_pred eeeeec-CHHHHHH
Confidence 799664 4555443
No 193
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=2e-17 Score=164.43 Aligned_cols=168 Identities=17% Similarity=0.110 Sum_probs=124.1
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.+++.++.+++ ++++|+|+++++.+++.++.++++. |++++|+|+.+...++..|++++.+|.++++
T Consensus 72 Lr~~ia~~~~~~~~-~I~it~G~~~~l~~~~~~~~~~gd~--------vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~~- 141 (369)
T PRK08153 72 LRHALAAHHGVAPE-NIMVGEGIDGLLGLIVRLYVEPGDP--------VVTSLGAYPTFNYHVAGFGGRLVTVPYRDDR- 141 (369)
T ss_pred HHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHhcCCCCE--------EEECCCcchHHHHHHHHcCCeEEEeeCCCCC-
Confidence 34444444455554 8999999999999999998888776 9999999999999999999999999987554
Q ss_pred ccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 260 VDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 260 ~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
+|++++++.+. .+++++++++|+||||.+-+.+++.++++. +++++++||+|+.+... + ...+++.. ..-
T Consensus 142 ~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~-----~-~~~~~~~~-~~~ 214 (369)
T PRK08153 142 EDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPA-----G-AAPPIDTD-DPN 214 (369)
T ss_pred CCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCc-----c-cchhhhhc-CCC
Confidence 89999887664 678999999999999999666666666554 38999999999876531 1 01122211 123
Q ss_pred cEEEecCCCCCC-ccCCcEEEEEeCCcccc
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~~~~~~~~ 365 (435)
.++..|+.|..+ +...+|+++. ++++.+
T Consensus 215 ~i~~~SfSK~~g~~GlRiG~~v~-~~~~~~ 243 (369)
T PRK08153 215 VIRMRTFSKAYGLAGARVGYAIG-APGTIK 243 (369)
T ss_pred EEEEecchHhccCcchheeeeec-CHHHHH
Confidence 466778999843 3456799665 445543
No 194
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.77 E-value=1.2e-17 Score=163.66 Aligned_cols=167 Identities=13% Similarity=0.076 Sum_probs=122.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~ 257 (435)
.++++.+++.+|.++. ++++|+|+++++.+++.. .+++ . |++++|+|+.+...++..|++++.+|+++
T Consensus 43 ~~lr~~ia~~~~~~~~-~I~it~Gs~~~l~~~~~~-~~~~-~--------vv~~~P~y~~y~~~~~~~G~~v~~vp~~~- 110 (332)
T PRK06425 43 TDIEDQIKIYTQGLKI-KVLIGPGLTHFIYRLLSY-INVG-N--------IIIVEPNFNEYKGYAFTHGIRISALPFNL- 110 (332)
T ss_pred HHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHHH-hCCC-c--------EEEeCCChHHHHHHHHHcCCeEEEEeCCc-
Confidence 3555666677777655 899999999999999864 4432 3 88889999999999999999999999874
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SL 333 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~ 333 (435)
...|.+.+++ .+++++++++||||||.+ +.+++|.++|++|++++++||+|..|... +.. ..... ..
T Consensus 111 ~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~-----~~~-~~~~~~~~ 181 (332)
T PRK06425 111 INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPN-----RAE-EDVLLNRS 181 (332)
T ss_pred ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccc-----cch-hHHHHhcc
Confidence 3456555543 478999999999999998 56888899999999999999999988541 100 00111 11
Q ss_pred CCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
.+-.+++.|+.|..+ +...+|+++. ++++.+.
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~-~~~li~~ 214 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIAT-DDYNMKI 214 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeec-CHHHHHH
Confidence 123566678999743 4466899655 4555443
No 195
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.77 E-value=1.1e-17 Score=166.88 Aligned_cols=211 Identities=14% Similarity=0.083 Sum_probs=141.4
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~ 254 (435)
++++.+++++|.+ ..+++++|+.++.+++.++.++++. |+++.+.|.+....+ ...|+++..++.
T Consensus 65 ~Le~~lA~l~G~~---~al~~~sG~~Ai~~~l~al~~~Gd~--------Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 65 LFEERMAVLEGGE---EALAFGSGMAAISATLIGFLKAGDH--------IICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred HHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 3455777788763 3466677788999999988877776 999999888754443 334666665543
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++|+|++|+.... ..++ ..
T Consensus 134 -----~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~---------~~pl---~~ 196 (386)
T PRK06767 134 -----ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL---------QRPL---EL 196 (386)
T ss_pred -----CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---hc
Confidence 378999999999999999999999999999999999999999999999999864322 1132 34
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHH-HHHH
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA-QVWI 411 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g-~~~~ 411 (435)
|+|+++.|++|++.++.. .|+++.+++.+.+........ .|+. -+ ...+|+.++.+..-. -.++
T Consensus 197 g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~-~g~~---------~~---~~~a~l~~~~L~tl~~r~~~ 263 (386)
T PRK06767 197 GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKD-IGGI---------MA---PFDAWLLLRGLKTLAVRMDR 263 (386)
T ss_pred CCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHH-hCCC---------CC---HHHHHHHHcCCCcHHHHHHH
Confidence 789999999999655433 466555443332211111111 1211 01 124565655554322 2244
Q ss_pred HHHHHHHHHHHHHhcCCcc
Q psy10210 412 CVRYHFNYKSCLQNLSDLW 430 (435)
Q Consensus 412 ~~~~~~~~~~~~~~l~~l~ 430 (435)
.++..+.+.+.+++.+++.
T Consensus 264 ~~~~a~~la~~L~~~p~v~ 282 (386)
T PRK06767 264 HCDNAEKIVSFLKNHDAVE 282 (386)
T ss_pred HHHHHHHHHHHHHcCCCcc
Confidence 4555555666667777765
No 196
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=8.5e-18 Score=168.01 Aligned_cols=160 Identities=15% Similarity=0.094 Sum_probs=124.4
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~ 254 (435)
++++.++++.|.+ ..+++++|++|+.+++.++..+++. |+++.+.|.+... .+...|++++.++.
T Consensus 68 ~le~~lA~l~g~~---~~i~~ssG~~Ai~~~l~all~~GD~--------Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 136 (398)
T PRK08249 68 AFEEKVRILEGAE---AATAFSTGMAAISNTLYTFLKPGDR--------VVSIKDTYGGTNKIFTEFLPRMGVDVTLCET 136 (398)
T ss_pred HHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHhcCCCCE--------EEEcCCchHHHHHHHHHHHhhCCeEEEEcCC
Confidence 4455777778764 3577777899999999988877776 9999999997543 45567888877663
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+.. ..+. ..
T Consensus 137 -----~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~---------~~~l---~~ 199 (398)
T PRK08249 137 -----GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN---------QNPL---AL 199 (398)
T ss_pred -----CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc---------CCch---hh
Confidence 589999999999999999999999999999999999999999999999999975432 1122 24
Q ss_pred CccEEEecCCCCCCccC-CcEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPK-GSSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~ 366 (435)
++|+++.|++|+..++. ..|.+++.++++.+.
T Consensus 200 ~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~ 232 (398)
T PRK08249 200 GADLVIHSATKFLSGHADALGGVVCGSKELMEQ 232 (398)
T ss_pred CCCEEeccCceecCCCCCceEEEEECCHHHHHH
Confidence 78999999999964443 233446666665543
No 197
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.77 E-value=7.9e-18 Score=167.23 Aligned_cols=158 Identities=21% Similarity=0.158 Sum_probs=124.5
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEecC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLT 255 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~ 255 (435)
+.+.+++++|.+ ..+++++|++|+..++.++..+++. |+++.+.|.+... .+...|+++..++.+
T Consensus 45 le~~la~l~g~~---~a~~~~sG~~Ai~~~l~~l~~~gd~--------Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 113 (369)
T cd00614 45 LEKKLAALEGGE---AALAFSSGMAAISTVLLALLKAGDH--------VVASDDLYGGTYRLFERLLPKLGIEVTFVDPD 113 (369)
T ss_pred HHHHHHHHHCCC---CEEEEcCHHHHHHHHHHHHcCCCCE--------EEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence 444666777653 4678888999999999999877776 9999999988553 345678898888754
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
|++++++++++++++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+.. ..++ ..|
T Consensus 114 -----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~---------~~~~---~~g 176 (369)
T cd00614 114 -----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL---------QRPL---ELG 176 (369)
T ss_pred -----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc---------CChh---hhC
Confidence 58999999988999999999999999999999999999999999999999876532 1123 237
Q ss_pred ccEEEecCCCCCCccC--CcEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGFTPK--GSSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~--g~g~il~~~~~~~~ 365 (435)
+|+++.|++|++.++. ..|+++.+++++.+
T Consensus 177 ~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~ 208 (369)
T cd00614 177 ADIVVHSATKYIGGHSDVIAGVVVGSGEALIQ 208 (369)
T ss_pred CcEEEeccceeccCCCCceEEEEEeCcHHHHH
Confidence 8999999999965543 25776655535543
No 198
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=4.8e-17 Score=158.06 Aligned_cols=232 Identities=18% Similarity=0.125 Sum_probs=156.3
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK 248 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~ 248 (435)
.|.++++|+ .+++++|.. ..+.+++||.|+.++++++. .++| +||+|+-+|.+...++.+.|++
T Consensus 33 G~~v~~FE~----~~ae~~G~k---~ava~~sgT~AL~laL~al~ig~GD--------eVI~ps~TfvATan~i~~~Ga~ 97 (374)
T COG0399 33 GPFVRRFEQ----AFAEYLGVK---YAVAVSSGTAALHLALLALAIGPGD--------EVIVPSFTFVATANAVLLVGAK 97 (374)
T ss_pred ChHHHHHHH----HHHHHhCCC---eEEEecChHHHHHHHHHhcCCCCCC--------EEEecCCchHHHHHHHHHcCCe
Confidence 344555554 667777775 46889999999999999763 4555 4999999999999999999999
Q ss_pred EEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210 249 VKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327 (435)
Q Consensus 249 v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~ 327 (435)
++.|++| +++.+|++.+|++|+++|++|+..+- .|...++++|.++|++||++||+|+|++-+..- .|...-
T Consensus 98 PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y----~gk~vG 170 (374)
T COG0399 98 PVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRHGLPVIEDAAQAHGATY----KGKKVG 170 (374)
T ss_pred EEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHcCCeEEEEcchhccCee----cCcccc
Confidence 9999999 67999999999999999999997765 788899999999999999999999999765431 111100
Q ss_pred CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCC----CCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210 328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWP----GGNYGSPSVSGSRSGGIIATCWAAMMYF 403 (435)
Q Consensus 328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~----gg~~~~~~~~gsr~~~~ia~~~a~l~~~ 403 (435)
.+ ..+-++|+-.+|.+... ..|+++++|+++.+........-. .-.|....+...-+-..+.++....+.-
T Consensus 171 t~----Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~ 245 (374)
T COG0399 171 SF----GDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLE 245 (374)
T ss_pred cc----cceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHH
Confidence 11 12567777788986444 458888888877654221110000 0011111111111222222333222222
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 404 GFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 404 g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
..+.+.++-+++.+.+.+.+++++.
T Consensus 246 ~l~~~~~~R~~~a~~Y~~~l~~~~~ 270 (374)
T COG0399 246 RLDEINERRREIAQIYAEALKGLPG 270 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3455666666666666666666654
No 199
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=2.2e-17 Score=165.87 Aligned_cols=244 Identities=16% Similarity=0.099 Sum_probs=164.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+...... . ++ .....++.+.++++++.+..+++++++||++|+..+++.++.+++.
T Consensus 60 ~~p~v~~ai~~~~~~~~~~~~-~---~~--~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~---- 129 (398)
T PRK03244 60 AHPAVVEAVTRQLATLGHVSN-L---FA--TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRT---- 129 (398)
T ss_pred CCHHHHHHHHHHHHhccCccC-c---cC--CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCC----
Confidence 368999999998886432111 1 11 1223577788888887543348999999999999999998876532
Q ss_pred CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD 290 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~ 290 (435)
+|+..+++|+++...+.. .|. ++..+|. .|++++++.+.+++++|+++.++||+|.+.+
T Consensus 130 ---~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~ 201 (398)
T PRK03244 130 ---KIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPP 201 (398)
T ss_pred ---eEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCC
Confidence 477777788876444332 232 2223332 3789999998778999999999999999854
Q ss_pred ----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 291 ----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 291 ----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
+++|.++|++||+++|+||+|++|.. .| ..+.+...+ .|+++++ |.+.++.++|+++.+++ +.
T Consensus 202 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr-----~g---~~~~~~~~~~~pDi~t~s--K~l~~G~~ig~~~~~~~-~~ 270 (398)
T PRK03244 202 PAGYLAAAREITDRHGALLVLDEVQTGIGR-----TG---AWFAHQHDGVTPDVVTLA--KGLGGGLPIGACLAFGP-AA 270 (398)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCcc-----cc---hHHhhhhhCCCCCEEEEc--hhhhCCcccEEEEEcHH-HH
Confidence 89999999999999999999987632 12 112111122 4776664 98655567899777654 43
Q ss_pred cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.. .....+.+ ..+ +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus 271 ~~~---~~~~~~~t-----~~~--~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 271 DLL---TPGLHGST-----FGG--NPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred hhc---cCCCCcCC-----CCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc
Confidence 321 11112222 222 22334677778887877888999999988888888765
No 200
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.77 E-value=1.8e-17 Score=165.21 Aligned_cols=160 Identities=20% Similarity=0.204 Sum_probs=125.4
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp 253 (435)
.++++.+++++|.+ .++++++|++|+.+++.++.++++. |+++.+.|.+ +...+...|++++.++
T Consensus 57 ~~le~~la~l~g~~---~~~~~~sG~~Ai~~al~al~~~Gd~--------Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~ 125 (380)
T TIGR01325 57 AAFEERIAALEGAE---RAVATATGMSAIQAALMTLLQAGDH--------VVASRSLFGSTVGFISEILPRFGIEVSFVD 125 (380)
T ss_pred HHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence 34556777788773 4688999999999999998877776 9999988865 3445677899999988
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
.+ |++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+.. ..++ .
T Consensus 126 ~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~---------~~pl---~ 188 (380)
T TIGR01325 126 PT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVL---------QQPL---K 188 (380)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---h
Confidence 64 78999999988999999999999999999999999999999999999999975432 1133 3
Q ss_pred CCccEEEecCCCCCCccC-CcEEEEEeCCcccc
Q psy10210 334 PGVTSISVDTHKYGFTPK-GSSVVLYRDLKYKH 365 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~ 365 (435)
.|+|+++.|++|++.++. ..|.+++.++++.+
T Consensus 189 ~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~ 221 (380)
T TIGR01325 189 LGADVVVYSATKHIDGQGRVMGGVIAGSEELMA 221 (380)
T ss_pred hCCCEEEeeccceecCCCCeEEEEEEeCHHHHH
Confidence 378999999999965542 23333555555443
No 201
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.77 E-value=1.3e-16 Score=156.78 Aligned_cols=259 Identities=16% Similarity=0.122 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC
Q psy10210 115 LEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET 194 (435)
Q Consensus 115 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~ 194 (435)
+..++.+++....++.+ +...|-....+|.++++..+.+..+. +..++..++++.+|+++|.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~---~~~~ylgl~~~~~~~~~~~~~~~~~~-----------g~~~~~~~Le~~lA~~~g~~~e- 72 (346)
T TIGR03576 8 EKALEIIREKISRGGRD---SLYDLTGLAGGFKIDEEDLELLETYV-----------GPAIFEEKVQELGREHLGGPEE- 72 (346)
T ss_pred HHHHHHHHHHHhccCCc---cccccccCCCChhHHHHHHHHHHHhc-----------CCHHHHHHHHHHHHHHcCCCcc-
Confidence 34455666655554322 22233344458999999998888762 3448888999999999999765
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEe---CCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLP---TTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG 271 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~---~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~ 271 (435)
++++++||++++..++.++.++++. |+++ .|+|+++...++..|+++... .|+++++. .+
T Consensus 73 ~ilv~~gg~~a~~~~~~al~~~gd~--------Vli~~~d~p~~~s~~~~~~l~ga~~~~~-------~~l~~l~~--~~ 135 (346)
T TIGR03576 73 KILVFNRTSSAILATILALEPPGRK--------VVHYLPEKPAHPSIPRSCKLAGAEYFES-------DELSELKK--ID 135 (346)
T ss_pred eEEEECCHHHHHHHHHHHhCCCCCE--------EEECCCCCCCchhHHHHHHHcCCEEecc-------CCHHHHhh--Cc
Confidence 8999999999999999999888776 8864 579999999999999986332 24454433 24
Q ss_pred CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC
Q psy10210 272 NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF 348 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~ 348 (435)
++++|+++. ++++|.+ +++++|+++|++||+++++|++|+.++.... +.+ + ....++|+++.+++|++.
T Consensus 136 ~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~---~~~--~--~~~~~~divv~s~SKala 207 (346)
T TIGR03576 136 GTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLY---GQP--P--ALDLGADLVVTSTDKLMD 207 (346)
T ss_pred CceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccC---CCC--C--HHHcCCcEEEeccchhcc
Confidence 678888765 6889998 8999999999999999999999987754210 111 1 112357888899999643
Q ss_pred ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 349 TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 349 ~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
|+. .|+++ .++++.+........|.. +-+....+++.++++.+..+...+..++..+.+.+++++
T Consensus 208 G~r-~G~v~-~~~~li~~l~~~~~~~~~----------s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 208 GPR-GGLLA-GRKELVDKIKSVGEQFGL----------EAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred ccc-eEEEE-eCHHHHHHHHHhhcCccc----------CccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 554 57755 555555443323333211 112223345566666655555555555555555555543
No 202
>KOG0256|consensus
Probab=99.77 E-value=7.8e-18 Score=159.48 Aligned_cols=196 Identities=15% Similarity=0.151 Sum_probs=150.5
Q ss_pred CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR 214 (435)
Q Consensus 135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~ 214 (435)
....+..|+|.+.+++++++.+..... |+... +|+ ++++|+|+|.++...+-.+.
T Consensus 113 ~la~fqdy~Gl~~frqa~A~Fm~~~r~-~~v~f-----------------------dP~-~~Vv~~G~T~ane~l~fcLa 167 (471)
T KOG0256|consen 113 ELAMFQDYHGLPSFRQAVAEFMERARG-NRVKF-----------------------DPE-RVVVTNGATSANETLMFCLA 167 (471)
T ss_pred hHhhcccccCchHHHHHHHHHHHHHhC-CCCcc-----------------------Ccc-ceEEecccchhhHHHHHHhc
Confidence 344567889999999999999987543 33332 444 79999999999999999999
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CCEEEEEecC--CCccccHHHHHHHhhc------CceEEEEeCCCCCc
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFDKAANYF-GMKVKHIRLT--SSYTVDLAALQSAITG------NTVMLVGSMPNFPY 285 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~~v~~vp~~--~~~~~d~~~l~~~i~~------~~~~v~~~~p~npt 285 (435)
++|+. .++|.|.|+++..-++.. |++++.|.++ ++++++++++|+++.+ +++.|++++|+||.
T Consensus 168 dpgda--------fLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPL 239 (471)
T KOG0256|consen 168 DPGDA--------FLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPL 239 (471)
T ss_pred CCCce--------eeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCC
Confidence 99998 999999999998777665 8899888886 6789999999988863 67999999999999
Q ss_pred ccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-----CCCCCCCCccEEEecCCCCCC-ccCCcEEE
Q psy10210 286 GTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-----PFDFSLPGVTSISVDTHKYGF-TPKGSSVV 356 (435)
Q Consensus 286 G~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-----~~d~~~~gvd~~~~s~hK~~~-~p~g~g~i 356 (435)
|++ +.+..+.++|.++++.+|+||+|++-++... ++... ..++ .+.-.-+..|..|=++ .+...|++
T Consensus 240 G~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~---~F~Sv~ev~~~~~~-~~~rvHivyslSKD~GlpGfRvGvi 315 (471)
T KOG0256|consen 240 GTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKS---EFRSVLEVRKDPHL-DPDRVHIVYSLSKDFGLPGFRVGVI 315 (471)
T ss_pred CCccCHHHHHHHHHHHhhcceEEEeehhhcccccCcc---CceEHHHHhhcccc-CCCcEEEEEEeccccCCCceEEEEE
Confidence 999 6677888889999999999999998776311 21100 0111 2233456677888633 33567998
Q ss_pred EEeCCcccccc
Q psy10210 357 LYRDLKYKHCQ 367 (435)
Q Consensus 357 l~~~~~~~~~~ 367 (435)
+..+++.....
T Consensus 316 YS~ne~VvsaA 326 (471)
T KOG0256|consen 316 YSNNEDVVSAA 326 (471)
T ss_pred EecChHHHHHH
Confidence 88877766543
No 203
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.76 E-value=7.1e-17 Score=161.71 Aligned_cols=252 Identities=19% Similarity=0.090 Sum_probs=164.4
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+....... ...+...++.+.++++.+. +++++++||++|+..++++++..... +|.
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~~~al~~ar~~~~~-~G~ 117 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVSNL------YRIPEQERLAERLVENSFA---DKVFFTNSGAEAVECAIKTARRYHYG-KGH 117 (389)
T ss_pred CCHHHHHHHHHHHHhcCccccc------cCChHHHHHHHHHHhhCCC---CEEEEcCCcHHHHHHHHHHHHHHHHh-cCC
Confidence 4899999999998763222111 1234455666777777632 37999999999999999999765322 332
Q ss_pred -CCCeEEEeCCCchhHHHHHHHcCCEEEEE----ecCCCcc----ccHHHHHHHhhcCceEEEEeCCCCCcccc----cC
Q psy10210 224 -SLPEIVLPTTAHPAFDKAANYFGMKVKHI----RLTSSYT----VDLAALQSAITGNTVMLVGSMPNFPYGTM----DD 290 (435)
Q Consensus 224 -~~~~viv~~~~~~~~~~~~~~~g~~v~~v----p~~~~~~----~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~ 290 (435)
.+++|++.++.|+++...+...+...... |..+++. .|++++++++++++++|+++.+++++|.. ++
T Consensus 118 ~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~~~~~~~ 197 (389)
T PRK01278 118 PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIRPAPDEF 197 (389)
T ss_pred CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCcCCCHHH
Confidence 34679999999998776665554332221 2112222 58999999998899999999988888843 68
Q ss_pred HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccc
Q psy10210 291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY 368 (435)
Q Consensus 291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~ 368 (435)
+++|.++|++||+++|+||+|+++... |. .+.....+ .|++++ .|.+.+....|+++.+++ +.+..
T Consensus 198 l~~l~~l~~~~g~~lI~DEv~~g~g~~-----g~---~~~~~~~~~~pdi~t~--sK~l~~G~~ig~~~~~~~-~~~~~- 265 (389)
T PRK01278 198 LKGLRQLCDENGLLLIFDEVQCGMGRT-----GK---LFAHEWAGVTPDIMAV--AKGIGGGFPLGACLATEE-AAKGM- 265 (389)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcC-----Cc---ceeecccCCCCCEEEE--ehhccCCcceEEEEEcHH-HHhcc-
Confidence 999999999999999999999976331 21 11111112 365554 587544456888666543 33221
Q ss_pred cccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 369 FVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 369 ~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.....+.++ .+ +....+++.++++.+..+++.++++++.+.+++.++.+
T Consensus 266 --~~~~~~~t~-----~~--~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l 314 (389)
T PRK01278 266 --TPGTHGSTY-----GG--NPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL 314 (389)
T ss_pred --CCCCCCCCC-----Cc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 111112221 12 22333567777888767778888888877777776654
No 204
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.76 E-value=6.5e-17 Score=160.14 Aligned_cols=205 Identities=15% Similarity=0.093 Sum_probs=139.8
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
..+..+.|..+ .++.+.+.+.+... ...|....|.+++++++++++..+....
T Consensus 24 i~l~~~~p~~~-~~~~~~~~~~~~~~---------~~~Y~~~~G~~~lr~~ia~~~~~~~~~~----------------- 76 (357)
T TIGR03539 24 VDLSVGTPVDP-VPPLIRAALAAAAD---------APGYPQTWGTPELREAIVDWLERRRGVP----------------- 76 (357)
T ss_pred EEccCCCCCCC-CCHHHHHHHHHHHh---------hCCCCcccCCHHHHHHHHHHHHHhcCCC-----------------
Confidence 34455556543 34455555554322 1234456688999999999887643221
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
|.++ +++++|+|+++++.+++.++ .++++. |++++|+|+.+...++..|++++.++
T Consensus 77 --------~~~~-~~I~it~G~~~~i~~~~~~l~~~~gd~--------Vl~~~p~y~~~~~~~~~~g~~~~~v~------ 133 (357)
T TIGR03539 77 --------GLDP-TAVLPVIGTKELVAWLPTLLGLGPGDT--------VVIPELAYPTYEVGALLAGATPVAAD------ 133 (357)
T ss_pred --------CCCc-CeEEEccChHHHHHHHHHHHcCCCCCE--------EEECCCCcHHHHHHHHhcCCEEeccC------
Confidence 0233 38999999999999988877 566666 99999999999999999999887764
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC----
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS---- 332 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~---- 332 (435)
|++.+. .+++++|++++|+||||.+ +++++|.++|++||+++|+|++|+.+... +.....++..
T Consensus 134 -~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-----~~~~~~~~~~~~~~ 204 (357)
T TIGR03539 134 -DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWE-----GRPVSILDPRVCGG 204 (357)
T ss_pred -ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccC-----CCCccceecccCCC
Confidence 222222 2578999999999999998 46888999999999999999999876531 1111111111
Q ss_pred CCCccEEEecCCCCC-CccCCcEEEEEeCCcccc
Q psy10210 333 LPGVTSISVDTHKYG-FTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~-~~p~g~g~il~~~~~~~~ 365 (435)
...-.++..|++|.. .+...+|+++ .++++.+
T Consensus 205 ~~~~vi~~~S~SK~~~~~G~R~G~~i-~~~~~~~ 237 (357)
T TIGR03539 205 DHTGLLAVHSLSKRSNLAGYRAGFVA-GDPALVA 237 (357)
T ss_pred ccccEEEEeccccccCCCceeEEEEe-cCHHHHH
Confidence 011246677899983 3445578865 5555544
No 205
>PLN02509 cystathionine beta-lyase
Probab=99.76 E-value=2.3e-17 Score=166.62 Aligned_cols=158 Identities=18% Similarity=0.192 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEE
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHI 252 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~v 252 (435)
..++.++++++.|.+ ..+++++|+.++.+++ .+.++||. |+++++.|.++.. .+...|++++.+
T Consensus 135 ~~aLE~~lA~leg~e---~ai~~~SG~aAi~~il-~ll~~GD~--------VI~~~~~y~~t~~ll~~~l~~~G~~v~~v 202 (464)
T PLN02509 135 RDALESLLAKLDKAD---RAFCFTSGMAALSAVT-HLIKNGEE--------IVAGDDVYGGSDRLLSQVVPRSGVVVKRV 202 (464)
T ss_pred HHHHHHHHHHHhCCC---EEEEeCcHHHHHHHHH-HHhCCCCE--------EEEcCCchhhHHHHHHHHHHHCCeEEEEe
Confidence 455666777777643 4577778888886655 45666666 9999999998763 345679998888
Q ss_pred ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
+. .|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++++.... + .+.
T Consensus 203 d~-----~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~------~---~pl--- 265 (464)
T PLN02509 203 NT-----TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL------S---RPL--- 265 (464)
T ss_pred CC-----CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc------C---Chh---
Confidence 64 368999999999999999999999999999999999999999999999999865432 1 122
Q ss_pred CCCccEEEecCCCCCCccCC--cEEEEEeCCcc
Q psy10210 333 LPGVTSISVDTHKYGFTPKG--SSVVLYRDLKY 363 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~ 363 (435)
..|+|+++.|.+||+.|+.+ .|+++++++.+
T Consensus 266 ~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l 298 (464)
T PLN02509 266 ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKL 298 (464)
T ss_pred hcCCcEEEecCcccccCCCccceeEEEeccHHH
Confidence 34789999999999877665 56666666554
No 206
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.76 E-value=1.2e-17 Score=167.46 Aligned_cols=159 Identities=22% Similarity=0.242 Sum_probs=124.8
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~ 254 (435)
++++.++++.|++. .+++++|+.|+.+++.++..+++. |+++.+.|.. +...+...|++++.+++
T Consensus 69 ~le~~lA~l~g~~~---~i~~~sG~~Al~~~l~~ll~~Gd~--------Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 69 LLEQRMASLEGGEA---AVALASGMGAITATLWTLLRPGDE--------VIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred HHHHHHHHHhCCCc---EEEEcCHHHHHHHHHHHHcCCCCE--------EEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 34457788888753 477778899999999988777776 9999998865 33456678999998876
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+.. ..++. .
T Consensus 138 ~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~---------~~~l~---~ 200 (403)
T PRK07503 138 T-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL---------QRPLE---L 200 (403)
T ss_pred C-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCchh---h
Confidence 3 78999999999999999999999999999999999999999999999999975422 12332 4
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
++|+++.|++|++.++.+ .|+++ .++++.+.
T Consensus 201 g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~ 233 (403)
T PRK07503 201 GADLVVHSATKYLGGHGDITAGLVV-GGKALADR 233 (403)
T ss_pred CCCEEEccccccccCCCceeEEEEE-cCHHHHHH
Confidence 789999999999655432 56644 66665443
No 207
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=7.7e-17 Score=158.09 Aligned_cols=201 Identities=14% Similarity=0.087 Sum_probs=142.1
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|.. .+|..+++.+.+.+..+ ..++++..|.+++++++++++....
T Consensus 22 i~l~~~~~~~-~~p~~~~~~~~~~~~~~-------~~~~Y~~~~~~~Lr~aia~~~~~~~-------------------- 73 (335)
T PRK14808 22 TYLALNENPF-PFPEDLVDEVFRRLNSD-------TLRIYYDSPDEELIEKILSYLDTDF-------------------- 73 (335)
T ss_pred eEecCCCCCC-CCCHHHHHHHHHHhhhh-------hhhcCCCCChHHHHHHHHHHhCCCC--------------------
Confidence 4455555665 34456777777655432 1121122368899999998886531
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccc
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTV 260 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~ 260 (435)
.++ +++++|+|+++++.+++.++ +. |++++|+|+.+..+++..|++++.+|+++++.+
T Consensus 74 ---------~~~-~~i~it~Ga~~~i~~~~~~~----d~--------v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 131 (335)
T PRK14808 74 ---------LSK-NNVSVGNGADEIIYVMMLMF----DR--------SVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI 131 (335)
T ss_pred ---------CCc-ceEEEcCCHHHHHHHHHHHh----Cc--------EEECCCCHHHHHHHHHHcCCeEEEecCCCcCCC
Confidence 123 38999999999999999876 44 999999999999999999999999999877765
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
+... + ++++++++++||||||.+-+.+++.+++ ++++++++||+|..|.- . .. .+... ...-.+++
T Consensus 132 ~~~~----~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~----~-~~-~~~~~--~~~~vi~~ 197 (335)
T PRK14808 132 PEVN----V-GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHG----E-SY-VDLLK--KYENLAVI 197 (335)
T ss_pred ChhH----c-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcC----C-ch-HHHHH--hCCCEEEE
Confidence 5432 2 3578999999999999998888998888 58999999999987631 0 00 00111 11135666
Q ss_pred ecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 341 VDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 341 ~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
.|+.|... +...+|+++. ++++.+.
T Consensus 198 ~S~SK~~~l~GlRvG~~v~-~~~~~~~ 223 (335)
T PRK14808 198 RTFSKAFSLAAQRIGYVVS-SEKFIDA 223 (335)
T ss_pred EechhhccCcccceEEEEe-CHHHHHH
Confidence 78999844 3467899665 4455443
No 208
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.76 E-value=1.4e-17 Score=166.57 Aligned_cols=158 Identities=17% Similarity=0.146 Sum_probs=123.5
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~ 254 (435)
++++.+++++|.+.. .++++|+.++..++.+..++++. |+++++.|.++... +...|++++.++
T Consensus 69 ~Le~~lA~l~G~~~~---~~~~sG~~Ai~~~l~~~l~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd- 136 (398)
T PRK07504 69 MFEKRMCALEGAEDA---RATASGMAAVTAAILCQVKAGDH--------VVAARALFGSCRYVVETLLPRYGIESTLVD- 136 (398)
T ss_pred HHHHHHHHHhCCCee---eEecCHHHHHHHHHHHHhCCCCE--------EEEcCCchhHHHHHHHHHHhhcCeEEEEEC-
Confidence 445677788887643 56788899999888887777766 99999999975433 445688888885
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
..|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+... .+. ..
T Consensus 137 ----~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~---------~~~---~~ 200 (398)
T PRK07504 137 ----GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ---------KPL---EL 200 (398)
T ss_pred ----CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC---------Cch---hh
Confidence 26899999999999999999999999999999999999999999999999999754321 122 33
Q ss_pred CccEEEecCCCCCCccC-CcEEEEEeCCccc
Q psy10210 335 GVTSISVDTHKYGFTPK-GSSVVLYRDLKYK 364 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~ 364 (435)
|+|+++.|+||++.++. ..|.+++.+++..
T Consensus 201 gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i 231 (398)
T PRK07504 201 GAHIVVYSATKHIDGQGRCLGGVVLSDKAWI 231 (398)
T ss_pred CCCEEEeeccccccCCccceEEEEEeCcHHH
Confidence 78999999999965542 3554455555543
No 209
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.9e-17 Score=164.60 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=122.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp 253 (435)
.++++.++++.|.+. .+++++|+.++..++ ++..+++. |+++++.|.+.. ..+...|++++.++
T Consensus 53 ~~Le~~lA~l~g~~~---~~~~~sG~aai~~~~-~~l~~Gd~--------Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 53 AALEELIAVLEGGHA---GFAFGSGMAAITAVM-MLFSSGDH--------VILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred HHHHHHHHHHhCCCc---eEEeCCHHHHHHHHH-HHhCCCCE--------EEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 445567788887643 355666788887665 45556665 999999998533 23455799998887
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
. .|+++++++++++|++|++++|+||+|.+.++++|.++|+++|+++++|++|+.... ..++ .
T Consensus 121 ~-----~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~---------~~p~---~ 183 (377)
T PRK07671 121 T-----SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYW---------QSPI---S 183 (377)
T ss_pred C-----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---h
Confidence 4 389999999999999999999999999999999999999999999999999864322 1133 3
Q ss_pred CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
.|+|+++.|.+|++.||.+ .|+++++++++.+.
T Consensus 184 ~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~ 218 (377)
T PRK07671 184 LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAED 218 (377)
T ss_pred hCCeEEEecCcccccCCccceeEEEEeCcHHHHHH
Confidence 4789999999999777754 46667767665443
No 210
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.76 E-value=1.8e-17 Score=162.25 Aligned_cols=159 Identities=16% Similarity=0.055 Sum_probs=118.3
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.+++++|.+++ ++++|+|+++++..+..++ .++ . |++++|+|..+...++..|++++.+|
T Consensus 52 lr~~la~~~~~~~~-~i~~t~G~~~~i~~~~~~l-~~g-~--------vl~~~p~y~~~~~~~~~~g~~~~~~~------ 114 (330)
T TIGR01140 52 LRAAAAAYYGLPAA-SVLPVNGAQEAIYLLPRLL-APG-R--------VLVLAPTYSEYARAWRAAGHEVVELP------ 114 (330)
T ss_pred HHHHHHHHhCCChh-hEEECCCHHHHHHHHHHHh-CCC-e--------EEEeCCCcHHHHHHHHHcCCEEEEeC------
Confidence 34444444554443 8999999999999976653 333 3 99999999999999999999998887
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccccC---HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC-CCCC
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDD---IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF-SLPG 335 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~-~~~g 335 (435)
|++++++.+ ++++++++++|+||||.+-+ +++|+++|+++|+++|+|++|.++... . ...+. ...+
T Consensus 115 -d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~------~--~~~~~~~~~~ 184 (330)
T TIGR01140 115 -DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD------A--SLAPQAARFP 184 (330)
T ss_pred -CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc------c--chhhHhccCC
Confidence 788899888 46789999999999999954 788889999999999999999877531 0 01111 1124
Q ss_pred ccEEEecCCCCCCcc-CCcEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~ 366 (435)
-+++..|++|+.+.| .++|+++.+ +++.+.
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~~-~~~~~~ 215 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVAH-PALLAR 215 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeCC-HHHHHH
Confidence 568888999984323 557996654 445443
No 211
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.76 E-value=1.5e-16 Score=160.14 Aligned_cols=248 Identities=17% Similarity=0.105 Sum_probs=163.1
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+.....+. .. .+...++.+.++++++. +.++++++|++|+..|+++++..+..++|.
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~--~~----~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~e~al~~a~~~~~~~~g~ 128 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRA--FR----NDQLAPLYEELAALTGS---HKVLPMNSGAEAVETAIKAVRKWGYEVKGV 128 (401)
T ss_pred CCHHHHHHHHHHHhhccccccc--cC----CHHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 4899999999998875433221 11 23445566677777764 278999999999999999998765332343
Q ss_pred C--CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210 224 S--LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM 288 (435)
Q Consensus 224 ~--~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~ 288 (435)
+ +++|++.+..|++....+...+. .+..+|. .|++++++++.+++++|++++++||+|.+
T Consensus 129 ~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~i~~~~~aii~e~~~~~~G~~ 203 (401)
T PRK00854 129 PEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-----GDAEALEAAITPNTVAFLVEPIQGEAGVI 203 (401)
T ss_pred CCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-----CCHHHHHHHhCCCeEEEEEccccCCCCCc
Confidence 3 35788888777775433332221 2233331 47899999999899999999999999998
Q ss_pred cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCcc-CCcEEEEEeCC
Q psy10210 289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTP-KGSSVVLYRDL 361 (435)
Q Consensus 289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p-~g~g~il~~~~ 361 (435)
.+ +++|.++|++||+++|+||+|+++... |. .+..... ..|.++++ |++.+. ..+|+++.++
T Consensus 204 ~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~-----g~---~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~- 272 (401)
T PRK00854 204 IPPAGYFTRVRELCTANNVTLILDEIQTGLGRT-----GK---LLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNS- 272 (401)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC-----ch---HhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcH-
Confidence 54 999999999999999999999865321 10 1111111 24777765 875544 3567766554
Q ss_pred ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 362 KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 362 ~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
++.+.. .....+.++ .+ +....+++.++|+.+..++..++.+++.+.+.+.++.+
T Consensus 273 ~~~~~l---~~~~~~~t~-----~~--~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 273 EVLGVL---KPGQHGSTF-----GG--NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred HHHhcc---cCCCCCCCC-----Cc--CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 443321 111222222 12 22334567777777766667888888888888877765
No 212
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.75 E-value=8e-17 Score=159.66 Aligned_cols=157 Identities=21% Similarity=0.182 Sum_probs=116.7
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc-----ccHHHH
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT-----VDLAAL 265 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~-----~d~~~l 265 (435)
+++ ++++|+|+++++.+++.++. +++. |++++|+|+.+...++..|++++.+|++.++. .+++++
T Consensus 73 ~~~-~I~it~G~~~~i~~~~~~l~-~g~~--------vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~ 142 (360)
T PRK07392 73 PPE-WILPGNGAAELLTWAGRELA-QLRA--------VYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTL 142 (360)
T ss_pred Chh-hEEECCCHHHHHHHHHHHhC-CCCe--------EEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHH
Confidence 443 89999999999999998864 4555 99999999999999999999999999974332 466666
Q ss_pred HHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC-CCCCCccEEEecCC
Q psy10210 266 QSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD-FSLPGVTSISVDTH 344 (435)
Q Consensus 266 ~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d-~~~~gvd~~~~s~h 344 (435)
++.. ++++++++++||||||.+-+.++|.++++++++ +++||+|..|... +....... .....-.++..|+.
T Consensus 143 ~~~~-~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~-----~~~~s~~~~~~~~~~vi~i~S~S 215 (360)
T PRK07392 143 PPQL-TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPP-----DAEQSLIPCLAEYPNLIILRSLT 215 (360)
T ss_pred HHhc-cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccC-----ccccchHHHhhcCCCEEEEEech
Confidence 6553 468999999999999999889999999999985 6779999988642 10000111 11112245667899
Q ss_pred CCCC-ccCCcEEEEEeCCcccc
Q psy10210 345 KYGF-TPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 345 K~~~-~p~g~g~il~~~~~~~~ 365 (435)
|... +...+|+++.. +++.+
T Consensus 216 K~~~l~GlRiG~~v~~-~~~~~ 236 (360)
T PRK07392 216 KFYSLPGLRLGYAIAH-PDRLQ 236 (360)
T ss_pred hhhcCCchheeeeeCC-HHHHH
Confidence 9854 55778996654 44443
No 213
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=1e-16 Score=161.76 Aligned_cols=256 Identities=14% Similarity=0.017 Sum_probs=155.6
Q ss_pred ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210 141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE 220 (435)
Q Consensus 141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~ 220 (435)
....+|++++++.+.+.++...... .....+......++++.+++++|.+ +.++++ +|++|+..++.++....
T Consensus 58 ~l~~~p~v~~a~~~~~~~~~~~~~~-s~~~~~~~~~~~~Le~~la~~~g~~--~~i~~~-sG~~a~~~~i~~l~~~~--- 130 (410)
T PRK13392 58 GMGQHPDVIGAMVDALDRYGAGAGG-TRNISGTSHPHVLLERELADLHGKE--SALLFT-SGYVSNDAALSTLGKLL--- 130 (410)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCCch-hhhcccChHHHHHHHHHHHHHhCCC--CEEEEC-cHHHHHHHHHHHHhcCC---
Confidence 3334789999999988775322111 1111223334557888999999853 245555 55788888888664310
Q ss_pred cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHH
Q psy10210 221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAK 296 (435)
Q Consensus 221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~ 296 (435)
+++.|+++...|.++...++..|+++..++.+ |.+++++.+. +++++|++++|+||+|.+.++++|.+
T Consensus 131 ---~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~ 202 (410)
T PRK13392 131 ---PGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICD 202 (410)
T ss_pred ---CCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHH
Confidence 12347777778999888888899988777632 3444444443 57899999999999999999999999
Q ss_pred HHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210 297 LGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG 376 (435)
Q Consensus 297 la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g 376 (435)
+|++||+++++|++|+.+.+. ..|.+.....-....+|+++.+++|.. +..| |++ +.++++.+........|..
T Consensus 203 l~~~~~~~livDea~~~g~~g---~~g~g~~~~~~~~~~~div~~tlsK~~-g~~G-G~~-~~~~~~~~~l~~~~~~~~~ 276 (410)
T PRK13392 203 LADRYNALTYVDEVHAVGLYG---ARGGGIAERDGLMDRIDMIQGTLAKAF-GCLG-GYI-AASADLIDFVRSFAPGFIF 276 (410)
T ss_pred HHHHcCCEEEEECCccccCcC---CCCCchhhhccCCCCCcEEEEEChHhh-hccc-chh-hcCHHHHHHHHHhCcchhc
Confidence 999999999999999844321 112111111111234688888999984 4444 664 4455554432222232221
Q ss_pred CCCCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHh
Q psy10210 377 GNYGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~ 425 (435)
..+.+....+++.++++.+... ...++.++..+.+.+.+++
T Consensus 277 --------s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 318 (410)
T PRK13392 277 --------TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNA 318 (410)
T ss_pred --------cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 1112223334555666654322 2234444555555555554
No 214
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.75 E-value=1.2e-16 Score=158.39 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=151.4
Q ss_pred hHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH-HHhhhhcCCCC
Q psy10210 147 DLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR-DYAREEKGISL 225 (435)
Q Consensus 147 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~-~~~~~~~g~~~ 225 (435)
+..+++.+.+.....++ ..+.+.++|. .+++++|.. .++.+++||.|+.+++.++. .+++
T Consensus 6 e~~~~v~~~l~s~~~~~-----~g~~~~~fE~----~~a~~~g~~---~~~~~~sgt~Al~~al~~l~~~~gd------- 66 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWLST-----YGPYVEEFEK----EFAEYFGVK---YAVAVSSGTSALHLALRALGLGPGD------- 66 (363)
T ss_dssp HHHHHHHHHHHHTCCSS-----SSHHHHHHHH----HHHHHHTSS---EEEEESSHHHHHHHHHHHTTGGTTS-------
T ss_pred HHHHHHHHHHHhCCccC-----CCHHHHHHHH----HHHHHhCCC---eEEEeCChhHHHHHHHHhcCCCcCc-------
Confidence 44556666666532221 1445555555 556667643 67999999999999999963 3344
Q ss_pred CeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCc
Q psy10210 226 PEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIP 304 (435)
Q Consensus 226 ~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~ 304 (435)
+|++|..++++...++...|++++.++++ +++.+|+++++++++++|++|++++. .|...++++|.++|+++|++
T Consensus 67 -eVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~ 142 (363)
T PF01041_consen 67 -EVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIP 142 (363)
T ss_dssp -EEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-E
T ss_pred -eEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCc
Confidence 59999999999999999999999999999 89999999999999999999998876 78888999999999999999
Q ss_pred EEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC-CCCC---CCCC
Q psy10210 305 VHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS-DWPG---GNYG 380 (435)
Q Consensus 305 livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~-~~~g---g~~~ 380 (435)
||+|+|++-+...-.+..| .+ ..+-++++...|.+.++.| |+++++++++.++...... .+.. ..|.
T Consensus 143 lIeD~a~a~g~~~~g~~~G----~~----gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 213 (363)
T PF01041_consen 143 LIEDAAQAFGARYKGRPVG----SF----GDIAIFSFHPTKIITTGEG-GAVVTNDPELAERARALRNHGRSRDAFRRYR 213 (363)
T ss_dssp EEEE-TTTTT-EETTEETT----SS----SSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTE
T ss_pred EEEccccccCceeCCEecc----CC----CCceEecCCCCCCCcCCCC-eeEEecHHHHHHHhhhhhccCcCcccccccc
Confidence 9999999865432111111 11 1133444445688644444 8888888776544221111 1000 0000
Q ss_pred C---CccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 381 S---PSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 381 ~---~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
. +... .|.. .+.++.+..+.-..+...++-+++.+.+.+.++.++.+
T Consensus 214 ~~~~~g~n-~rm~-~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~ 263 (363)
T PF01041_consen 214 HELPPGYN-FRMS-ELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGI 263 (363)
T ss_dssp ESSSS--B--B-B-HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTE
T ss_pred ccccCCcc-cccH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCc
Confidence 0 0111 1222 22233333333334555666666666677777666654
No 215
>PRK05968 hypothetical protein; Provisional
Probab=99.75 E-value=3.5e-17 Score=163.45 Aligned_cols=159 Identities=16% Similarity=0.151 Sum_probs=124.1
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp 253 (435)
.++++.+++++|.+. .+++++|+.|+.+++.++..++++ |+++.+.|.+. ...+...|++++.++
T Consensus 66 ~~le~~lA~l~g~~~---av~~~sG~~Ai~~al~al~~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd 134 (389)
T PRK05968 66 RAFEEMLAKLEGAED---ARGFASGMAAISSTVLSFVEPGDR--------IVAVRHVYPDAFRLFETILKRMGVEVDYVD 134 (389)
T ss_pred HHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHHHhCCCCE--------EEEeCCCchHHHHHHHHHHHHcCceEEEeC
Confidence 344567788888753 355677789999999888777776 99999998873 356677899999887
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
.+ |++++++++ ++|++|++++|+|+++.+.++++|.++|++||+++++|++|+.+... .+. .
T Consensus 135 ~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~---------~p~---~ 196 (389)
T PRK05968 135 GR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ---------RPI---T 196 (389)
T ss_pred CC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc---------Cch---h
Confidence 43 789999988 67899999999999999999999999999999999999998765321 122 2
Q ss_pred CCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 334 PGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
.|+|+++.|++|++.+|.+ .|+ ++.++++.+.
T Consensus 197 ~g~Divv~S~tK~l~g~~~~~gG~-i~~~~~~~~~ 230 (389)
T PRK05968 197 LGVDLVIHSASKYLGGHSDTVAGV-VAGSKEHIAR 230 (389)
T ss_pred cCCcEEEeeccccccCCCCeEEEE-EEECHHHHHH
Confidence 4789999999999777654 465 5566665443
No 216
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.75 E-value=2.3e-17 Score=165.25 Aligned_cols=155 Identities=17% Similarity=0.188 Sum_probs=121.9
Q ss_pred HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCCC
Q psy10210 182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTSS 257 (435)
Q Consensus 182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~~ 257 (435)
+.+++++|.+ ..++++||++|+..++.++.++++. |+++.+.|.+.. ..++..|++++.++.+
T Consensus 71 ~~iA~~~g~~---~~l~~~sG~~Ai~~al~~ll~~Gd~--------Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 137 (400)
T PRK06234 71 NKLALLEGGE---AAVVAASGMGAISSSLWSALKAGDH--------VVASDTLYGCTFALLNHGLTRYGVEVTFVDTS-- 137 (400)
T ss_pred HHHHHHhCCC---cEEEEcCHHHHHHHHHHHHhCCCCE--------EEEecCccchHHHHHHHHHhhCCeEEEEECCC--
Confidence 3555556543 5688999999999999988877776 999999887743 4456789999998753
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
|+++++++++++|++|++++|+||+|.+.++++|.++|+++ |+++++|++|+.+.. + .++ ..+
T Consensus 138 ---d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~------~---~~l---~~g 202 (400)
T PRK06234 138 ---NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI------Q---RPL---QLG 202 (400)
T ss_pred ---CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc------C---Cch---hhC
Confidence 79999999999999999999999999999999999999997 999999999976533 1 123 237
Q ss_pred ccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 336 VTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
+|+++.|++|++.++.. .|+++.+ +++.+
T Consensus 203 ~Divv~S~sK~l~g~g~~~gG~v~~~-~~~~~ 233 (400)
T PRK06234 203 ADVVVHSATKYLNGHGDVIAGFVVGK-EEFIN 233 (400)
T ss_pred CcEEEeeccccccCCCCceeEEEEec-HHHHH
Confidence 89999999999654432 4775544 45443
No 217
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.75 E-value=1.5e-16 Score=160.09 Aligned_cols=253 Identities=13% Similarity=0.024 Sum_probs=160.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++.+++.+++.++....... ....+......++.+.+++++|.+ ..+++++|++|+..++.++....
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~s-~~~~g~~~~~~~Le~~la~~~g~~---~~l~~~sG~~an~~ai~~l~~~~------ 129 (402)
T TIGR01821 60 QHPEVLQAMHETLDKYGAGAGGT-RNISGTNIPHVELEAELADLHGKE---SALVFTSGYVANDATLATLAKII------ 129 (402)
T ss_pred CCHHHHHHHHHHHHHcCCCCcch-hhhhCCcHHHHHHHHHHHHHhCCC---eEEEECchHHHHHHHHHHhhCCC------
Confidence 48999999999998754332211 111123445567888889999853 35666777999999998876421
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++..|+.....|.+....+...|+++..++. .|++++++.++ +++++|++++++||+|.+.++++|.++|+
T Consensus 130 ~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~ 204 (402)
T TIGR01821 130 PGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEICDLAD 204 (402)
T ss_pred CCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHH
Confidence 1123555556888888888888888766653 36677777765 26789999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
+||+++++|++|+.+++ ...|.+... .+. ...+|++..++.|.+ +..| |+++ .++++.+........+.
T Consensus 205 ~~~~~livDea~~~G~~---g~~g~g~~~~~~~-~~~~div~~t~sKa~-g~~G-G~i~-~~~~~~~~l~~~~~~~~--- 274 (402)
T TIGR01821 205 KYGALTYLDEVHAVGLY---GPRGGGIAERDGL-MHRIDIIEGTLAKAF-GVVG-GYIA-ASRKLIDAIRSYAPGFI--- 274 (402)
T ss_pred HcCCEEEEeCccccccc---CCCCCccchhccC-CCCCeEEEEechhhh-ccCC-ceee-cCHHHHHHHHHhCcCce---
Confidence 99999999999984433 111221111 111 124688888999984 5444 6644 44454433211112111
Q ss_pred CCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhc
Q psy10210 379 YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 379 ~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l 426 (435)
..++.+....+++.++++.+... ...++.++..+.+.+.++++
T Consensus 275 -----~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 275 -----FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred -----ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 11223333445666777765433 34445556666666666654
No 218
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=5.2e-17 Score=161.13 Aligned_cols=172 Identities=13% Similarity=0.148 Sum_probs=126.9
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT- 255 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~- 255 (435)
.++++.+++++|.+++ ++++|+|+++++.+++.++..++ +. |++++|+|..+...++..|++++.+|++
T Consensus 62 ~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~~~~g~~~--------vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 132 (364)
T PRK04781 62 PGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRALCVPGRDA--------VLVTPPVFGMYAVCARLQNAPLVEVPLVD 132 (364)
T ss_pred HHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHhcCCCCCe--------EEEcCCChHHHHHHHHHcCCEEEEEecCC
Confidence 3455566666666654 89999999999999999987766 44 9999999999999999999999999984
Q ss_pred --CCccccHHHHHHH-hhcCceEEEEeCCCCCcccccCHHHHHHHHHH--cCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 256 --SSYTVDLAALQSA-ITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK--YGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 256 --~~~~~d~~~l~~~-i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~--~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
+++.+|++++.+. .++++++|++++||||||.+-+.+++.++++. +++++|+|++|..|... . . .....+
T Consensus 133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~---~-~-~~~~~~ 207 (364)
T PRK04781 133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDV---P-S-AVGLLA 207 (364)
T ss_pred CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCC---c-c-hHHHHh
Confidence 2346789888654 46789999999999999999777777666654 47999999999987531 0 0 000111
Q ss_pred CCCCCccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 331 FSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
...-.++..|+.|..+ +...+|+++ .++++.+.
T Consensus 208 --~~~~vi~~~SfSK~~gl~GlRvGy~v-~~~~l~~~ 241 (364)
T PRK04781 208 --RYDNLAVLRTLSKAHALAAARIGSLI-ANAELIAV 241 (364)
T ss_pred --hCCCEEEEecChhhcccccceeeeee-CCHHHHHH
Confidence 1122466778999743 457789955 55565544
No 219
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=4.1e-17 Score=162.22 Aligned_cols=159 Identities=14% Similarity=0.098 Sum_probs=118.4
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCc----hhHHHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAH----PAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~----~~~~~~~~~~g~~v~~vp~ 254 (435)
++++.+++++|.+. + +++++|++++..++.++.++++. |+++.+.| ..+...++..|++++.++.
T Consensus 49 ~L~~~lA~l~g~~~--~-v~~~sG~~ai~~~l~al~~~Gd~--------Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~ 117 (376)
T PRK06460 49 ELTKKIVELENAEM--G-VAFSSGMGAISTTALALLKPGNS--------VLVHRDMFGRSYRFFTDYLKNWGVNVDASNP 117 (376)
T ss_pred HHHHHHHHHhCCCc--E-EEeCCHHHHHHHHHHHHhCCCCE--------EEEecCCcCcHHHHHHHHHHhhCcEEEEECC
Confidence 45567778887753 3 44466689999999998877776 99987654 4466778888999988876
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
++ .+.+++.+++++++|++++|+||+|.+.++++|.++|+++|+++++|++|+.+.. ..+. ..
T Consensus 118 ~~-----~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~---------~~~l---~~ 180 (376)
T PRK06460 118 GS-----DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN---------QKPL---EL 180 (376)
T ss_pred CC-----HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc---------CChh---hc
Confidence 42 2345555667899999999999999999999999999999999999999875321 0122 23
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
++|+++.|++|+..|+.+ .|+ ++.++++.+.
T Consensus 181 ~~divv~S~sK~l~G~~~~~~G~-~~~~~~l~~~ 213 (376)
T PRK06460 181 GADIVVHSASKFLAGHNDVIAGL-AAGYGKLLNV 213 (376)
T ss_pred CCCEEEeecceeccCCCCceEEE-EecCHHHHHH
Confidence 689999999999544332 566 5566665543
No 220
>PRK08354 putative aminotransferase; Provisional
Probab=99.75 E-value=1.3e-16 Score=155.01 Aligned_cols=148 Identities=14% Similarity=0.123 Sum_probs=115.2
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCcc
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYT 259 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~ 259 (435)
+++.+++.+| +++++|+|+++++.+++..+. +++. |++++|+|+.+...++..|++++.++
T Consensus 45 l~~~ia~~~~----~~I~vt~G~~~al~~~~~~~~-~gd~--------vlv~~P~y~~~~~~~~~~g~~~~~~~------ 105 (311)
T PRK08354 45 LEEEFSKLFG----EPIVITAGITEALYLIGILAL-RDRK--------VIIPRHTYGEYERVARFFAARIIKGP------ 105 (311)
T ss_pred HHHHHHHHHC----CCEEECCCHHHHHHHHHHhhC-CCCe--------EEEeCCCcHHHHHHHHHcCCEEeecC------
Confidence 4456666665 279999999999998875443 5555 99999999999999999999997764
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
+|++.+++++. +++++++++||||||.+ +.+++|.++|+++|+++|+||+|.+|... +. ..+ ..-
T Consensus 106 ~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~-----~~---~~~---~~~ 173 (311)
T PRK08354 106 NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKK-----PE---SPE---GEN 173 (311)
T ss_pred CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccc-----cc---ccC---CCc
Confidence 57888888876 56789999999999998 56888889999999999999999988652 10 111 223
Q ss_pred cEEEecCCCCCC-ccCCcEEEEE
Q psy10210 337 TSISVDTHKYGF-TPKGSSVVLY 358 (435)
Q Consensus 337 d~~~~s~hK~~~-~p~g~g~il~ 358 (435)
.+++.|+.|... +...+|+++.
T Consensus 174 vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 174 IIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred EEEEeccHhhcCCccceeeeeee
Confidence 566678899843 4466898765
No 221
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.75 E-value=2.7e-17 Score=164.68 Aligned_cols=154 Identities=15% Similarity=0.123 Sum_probs=121.7
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~ 254 (435)
++.+.++++.|.+ ..+++++|+.|+..++.++..+++. |+++...|.+ +...++..|++++.++.
T Consensus 74 ~le~~lA~l~g~~---~al~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 74 MFEERLRLIEGAE---ACFATASGMSAVFTALGALLGAGDR--------LVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred HHHHHHHHHhCCC---cEEEECChHHHHHHHHHHHhCCCCE--------EEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 4455677888764 5688899999999999988877776 9988865533 45667778999999874
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.... ..+. ..
T Consensus 143 -----~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~---------~~~~---~~ 205 (403)
T PRK07810 143 -----EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLL---------QRGL---PL 205 (403)
T ss_pred -----CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcccc---------CChh---hc
Confidence 389999999999999999999999999999999999999999999999999874432 1122 34
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeC
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRD 360 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~ 360 (435)
|+|+++.|.+|++.+... .|+++.++
T Consensus 206 gaDivv~S~tK~l~g~g~~~gG~v~~~~ 233 (403)
T PRK07810 206 GADVVVYSGTKHIDGQGRVLGGAILGDR 233 (403)
T ss_pred CCcEEEccCCceecCCcCceeEEEEeCh
Confidence 789999999999544321 36655443
No 222
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.75 E-value=1.6e-16 Score=159.86 Aligned_cols=210 Identities=13% Similarity=0.087 Sum_probs=143.8
Q ss_pred CCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHH
Q psy10210 100 GLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAE 179 (435)
Q Consensus 100 ~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~ 179 (435)
...+..+.|..+ .+..+.+.+.+.+...... .....|.+..|.+++++++++.+....
T Consensus 35 ~i~l~~~~~~~~-~~~~v~~~~~~~~~~~~~~--~~~~~Y~p~~g~~~lr~aia~~~~~~~------------------- 92 (402)
T TIGR03542 35 IIRLGIGDTTQP-LPASVIEAFHNAVDELASE--ETFRGYGPEQGYPFLREAIAENDYRGR------------------- 92 (402)
T ss_pred eEEcCCCCCCCC-CCHHHHHHHHHHHhccccc--ccccCCCCCCCCHHHHHHHHHHHHhcC-------------------
Confidence 345555666653 3556777777766532110 112345566789999999998753310
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCC-----------E
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGM-----------K 248 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~-----------~ 248 (435)
.++ +++++|+|+++++.+++ .+..+++. |++++|+|..+...++..|+ +
T Consensus 93 ----------~~~-d~I~it~Ga~~al~~l~-~l~~~gd~--------Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~ 152 (402)
T TIGR03542 93 ----------IDP-EEIFISDGAKCDVFRLQ-SLFGSDNT--------VAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSK 152 (402)
T ss_pred ----------CCH-HHEEECCCcHHHHHHHH-HhcCCCCE--------EEEeCCCCcchHHHHHHcCCccccccccccce
Confidence 123 38999999999999864 44455555 99999999999999999999 9
Q ss_pred EEEEecCC--CccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 249 VKHIRLTS--SYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 249 v~~vp~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
++.+|+++ ++..|++. .+++++|++++||||||.+ +.+++|.++|++||+++|+|++|..|... . .
T Consensus 153 ~~~v~~~~~~~~~~~~~~-----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~--~--~ 223 (402)
T TIGR03542 153 ITYLPCTKENNFIPDLPE-----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD--P--S 223 (402)
T ss_pred EEEeecchhhCCCCCccc-----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC--C--C
Confidence 99999863 34444321 1578999999999999999 56899999999999999999999987541 0 0
Q ss_pred CCCCCCCCCC-CCccEEEecCCCCC-CccCCcEEEEEeC
Q psy10210 324 YPLPPFDFSL-PGVTSISVDTHKYG-FTPKGSSVVLYRD 360 (435)
Q Consensus 324 ~~~~~~d~~~-~gvd~~~~s~hK~~-~~p~g~g~il~~~ 360 (435)
.+.+...... .+..+.+.|+.|.. .....+|+++..+
T Consensus 224 ~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~ 262 (402)
T TIGR03542 224 LPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPK 262 (402)
T ss_pred CCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecH
Confidence 0001111111 12345567889974 3446789966644
No 223
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.75 E-value=4.1e-17 Score=161.85 Aligned_cols=158 Identities=20% Similarity=0.227 Sum_probs=122.7
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~ 254 (435)
++++.++++.|.+. .++++||++++.+++ ++..+++. |+++++.|++. ...++..|++++.++.
T Consensus 56 ~le~~la~l~g~~~---~~~~~sG~~ai~~~~-~ll~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 56 VLEQAIADLEGGDQ---GFACSSGMAAIQLVM-SLFRSGDE--------LIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred HHHHHHHHHhCCCc---EEEEcCHHHHHHHHH-HHhCCCCE--------EEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 45557788888754 378888899999876 45556665 99999999873 4455668999988875
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.++++|.++|++||+++++|++|+.... ..+. ..
T Consensus 124 -----~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~---------~~p~---~~ 186 (366)
T PRK08247 124 -----ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL---------QRPL---EE 186 (366)
T ss_pred -----CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc---------cCch---hc
Confidence 388999999999999999999999999999999999999999999999999854322 1122 24
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
|+|+++.|++|+..++.+ .|+++.+++++.+
T Consensus 187 g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~ 219 (366)
T PRK08247 187 GADIVIHSATKYLGGHNDVLAGLVVAKGQELCE 219 (366)
T ss_pred CCcEEEeecceeccCCCceeeeEEecChHHHHH
Confidence 789999999999765543 4665555455543
No 224
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.75 E-value=2.3e-16 Score=156.13 Aligned_cols=252 Identities=18% Similarity=0.146 Sum_probs=179.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|.+.+++.+++.+....+.... ..+...++.+.+.+++..+....++++++|+||++.|++.++.....
T Consensus 73 ~hP~Vv~Av~~q~~~~~h~~~~~~-----~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr---- 143 (447)
T COG0160 73 NHPRVVEAVKRQLAKLNHTHTRDL-----YYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGR---- 143 (447)
T ss_pred CCHHHHHHHHHHHHHhhcccCCcc-----cchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCC----
Confidence 389999999999988654432211 11556667777888776544457999999999999999999876543
Q ss_pred CCCeEEEeCCCchhHHHHHH-HcCC-------------EEEEEecCCCcc------------ccHHHHHHHhhc------
Q psy10210 224 SLPEIVLPTTAHPAFDKAAN-YFGM-------------KVKHIRLTSSYT------------VDLAALQSAITG------ 271 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~-~~g~-------------~v~~vp~~~~~~------------~d~~~l~~~i~~------ 271 (435)
+.||....+|++....+. ..|. .+.++|....++ -..+.+++.+..
T Consensus 144 --~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~ 221 (447)
T COG0160 144 --PGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE 221 (447)
T ss_pred --CcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence 459998888888443332 2221 366676542221 123445554432
Q ss_pred CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCC
Q psy10210 272 NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHK 345 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK 345 (435)
++.++++...+...|.+ +.++++.++|++||+++|+||+|.|| |+....|.+...|+ |+++++ |
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~--------GRTG~~fa~E~~gv~PDivt~a--K 291 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF--------GRTGKMFAFEHFGVEPDIVTLA--K 291 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC--------CccccchhhhhcCCCCCEEEec--c
Confidence 57899999999988888 66999999999999999999999998 44445788888886 888887 8
Q ss_pred CCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 346 ~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
-+.+..+.|.++.+. ++.+. .+.-.+++|+..+ .+.+++.|+++.+..+++.++++++.+++++.+++
T Consensus 292 ~ig~G~Pl~avv~r~-ei~~~----~~g~~~~Tf~GNp-------va~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~ 359 (447)
T COG0160 292 SLGGGLPLSAVVGRA-EIMDW----PPGGHGGTFGGNP-------VACAAALAVLDVIEEENLLERAAELGEYLRDRLEE 359 (447)
T ss_pred cccCCCceeEEeccH-Hhccc----CCcccCCCCCcCH-------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHH
Confidence 766677788866664 43321 2222233332222 23478899999999999999999999999988887
Q ss_pred cCC
Q psy10210 426 LSD 428 (435)
Q Consensus 426 l~~ 428 (435)
|++
T Consensus 360 l~~ 362 (447)
T COG0160 360 LQE 362 (447)
T ss_pred HHh
Confidence 654
No 225
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=3.5e-17 Score=162.74 Aligned_cols=158 Identities=18% Similarity=0.174 Sum_probs=121.0
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~ 254 (435)
++++.++++.|.+. .+++++|+.|+.+++ ++.++++. |+++++.|++.. ..+...|++++.++.
T Consensus 54 ~Le~~la~l~g~~~---al~~~SG~~Al~~~l-~~l~pGd~--------Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 54 ALEELIADLEGGVK---GFAFASGLAGIHAVF-SLFQSGDH--------VLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred HHHHHHHHHhCCCC---EEEECCHHHHHHHHH-HHcCCCCE--------EEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 34456777777543 366677788998666 45566665 999999988643 445667888888874
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|+++++++++++|++|++++|+||+|.+.|+++|.++|++||+++++|++|+.... + .+. ..
T Consensus 122 -----~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~------~---~p~---~~ 184 (380)
T PRK06176 122 -----SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY------Q---NPL---LL 184 (380)
T ss_pred -----CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCcccccc------C---Ccc---cc
Confidence 379999999999999999999999999999999999999999999999999975422 1 133 34
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
|+|+++.|.+|++.+|.. .|+++.+++++..
T Consensus 185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~ 217 (380)
T PRK06176 185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ 217 (380)
T ss_pred CCCEEEecCceeccCCccceeeEEEecHHHHHH
Confidence 899999999999766643 4666666665543
No 226
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.74 E-value=1.6e-16 Score=159.64 Aligned_cols=251 Identities=19% Similarity=0.127 Sum_probs=163.9
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|.+.+++.+.+........ ....+...++.++++++.+. +++++|+||++|+.+++++++.+++. .+..
T Consensus 57 ~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~~~al~~a~~~~~~-~~~~ 126 (396)
T PRK02627 57 HPKLVEAIQEQAAKLIHTSN------LYYIEPQEELAEKLVELSGM---DKVFFCNSGAEANEAAIKLARKYGHK-KGIE 126 (396)
T ss_pred CHHHHHHHHHHHhhcccccc------ccCCHHHHHHHHHHHhhcCC---CEEEECCCcHHHHHHHHHHHHHHhcc-cCCC
Confidence 58899999988876322111 11245667777888888654 38999999999999999999877654 4445
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCE-EE---EEecCCCc----cccHHHHHHHhhcCceEEEEeCCCCCcccc----cCHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMK-VK---HIRLTSSY----TVDLAALQSAITGNTVMLVGSMPNFPYGTM----DDIG 292 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~-v~---~vp~~~~~----~~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i~ 292 (435)
+++|++.++.|+++...+...+.. .. ..|...+. ..|++++++++.+++++|++++++||+|.. +.++
T Consensus 127 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~ 206 (396)
T PRK02627 127 KPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQ 206 (396)
T ss_pred CCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHH
Confidence 578999999988865554443322 11 11221111 128999999998889999999999999943 5699
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~ 370 (435)
+|.++|++||+++|+||+|++|... |. .+.+...+ .|++++ .|...++..+|+++.++ ++.+..
T Consensus 207 ~l~~l~~~~~~~lI~DE~~~g~g~~-----g~---~~~~~~~~~~pdi~t~--sK~~~~G~rig~~~~~~-~~~~~~--- 272 (396)
T PRK02627 207 ALRELCDENGILLILDEVQTGMGRT-----GK---LFAYQHYGIEPDIMTL--AKGLGGGVPIGAVLAKE-KVADVF--- 272 (396)
T ss_pred HHHHHHHHcCCEEEEechhcCCCcc-----Cc---eeeehhcCCCCCEEEE--cchhhCCcccEEEEEcH-HHHhcc---
Confidence 9999999999999999999986331 21 11111122 366655 48754446689966654 443321
Q ss_pred cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
....... +..+ +....+++.++++.+..+++.+++++..+.+++.+.++
T Consensus 273 ~~~~~~~-----t~~~--~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T PRK02627 273 TPGDHGS-----TFGG--NPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLREL 321 (396)
T ss_pred CCCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1111 22233566677777766777778877777776665543
No 227
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.74 E-value=4.7e-17 Score=160.00 Aligned_cols=230 Identities=13% Similarity=0.027 Sum_probs=156.1
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCC-hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHHHc
Q psy10210 169 IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSG-GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAANYF 245 (435)
Q Consensus 169 ~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~g-gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~~~ 245 (435)
..+.+.++..++++.++++++.+.+.++++++| ||+|++.++.++..++++ +++......+ +.+.++..
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~--------~l~i~~G~fg~r~~~~a~~~ 102 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKV--------ADYIVTGAWSKKAAKEAKKY 102 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe--------EEEEECCHHHHHHHHHHHHh
Confidence 356677888899999999999755556777765 999999999998766655 6555555555 67888889
Q ss_pred CCEEEEEecCCC----ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210 246 GMKVKHIRLTSS----YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA 321 (435)
Q Consensus 246 g~~v~~vp~~~~----~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~ 321 (435)
|+ +..+..++. ..+|+++++ +++++++|.+++..|.||+..+ ++++.++++++||++++.+
T Consensus 103 g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g------- 167 (349)
T TIGR01364 103 GV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNIL------- 167 (349)
T ss_pred CC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEcccccc-------
Confidence 99 777775422 235666554 3568899999999999999855 6777789999999998543
Q ss_pred cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--CCCCccccCCCchHHHHHHHH
Q psy10210 322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--YGSPSVSGSRSGGIIATCWAA 399 (435)
Q Consensus 322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--~~~~~~~gsr~~~~ia~~~a~ 399 (435)
+.++|+.. .|++++|+||+ ++|.|+|+++++++.+.+... ..+.+..-. ....+..++.+...+.+..++
T Consensus 168 ----~~~id~~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~a 239 (349)
T TIGR01364 168 ----SRPIDVSK--FGLIYAGAQKN-IGPAGLTVVIVRKDLLGRASR-ITPSMLNYKIHAENDSMYNTPPTFAIYVSGLV 239 (349)
T ss_pred ----CccCCHHH--ccEEEEecccc-cCCCceEEEEECHHHHhhccc-CCCCcchHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 33677654 56999999998 579999998888765432111 111110000 001122356667777788888
Q ss_pred HHHhcHH-HHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 400 MMYFGFE-AQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 400 l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
++.+..+ |+.++.++..+..+.+++.+.++
T Consensus 240 l~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~ 270 (349)
T TIGR01364 240 FKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS 270 (349)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 8877555 45555555555544444444433
No 228
>PLN02397 aspartate transaminase
Probab=99.74 E-value=6.2e-17 Score=163.60 Aligned_cols=184 Identities=11% Similarity=0.034 Sum_probs=127.8
Q ss_pred cccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC----CceEEcCChHHHHHHHHH
Q psy10210 136 RVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE----TCGCMTSGGTESIMMACK 211 (435)
Q Consensus 136 ~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~----~~~~~t~ggteai~~a~~ 211 (435)
..+|++..|.+++|+++++++...... +. +++ .+++.++| +.++..++.
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~-~~-------------------------~~~~i~~~~i~~g~G-a~~l~~~~~ 136 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSP-AI-------------------------KENRVATVQCLSGTG-SLRLGAEFL 136 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCc-hh-------------------------hcCeeEeeecccchH-HHHHHHHHH
Confidence 346778889999999999988543211 00 111 01222332 233445555
Q ss_pred HHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C-CCccccHHHHHHHhh---cCceEEEEeCCCCCcc
Q psy10210 212 AYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T-SSYTVDLAALQSAIT---GNTVMLVGSMPNFPYG 286 (435)
Q Consensus 212 a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~-~~~~~d~~~l~~~i~---~~~~~v~~~~p~nptG 286 (435)
++.++|+. |++++|+|+.+...++..|++++.+|+ + +++.+|++.+++.+. ++++++++++||||||
T Consensus 137 ~~~~pGd~--------Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG 208 (423)
T PLN02397 137 ARFYPGST--------IYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTG 208 (423)
T ss_pred HHhCCCCE--------EEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCC
Confidence 55456665 999999999999999999999999998 3 457899998888775 5678999999999999
Q ss_pred cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCC-ccEEEecCCCCCC-ccCCcEEEE
Q psy10210 287 TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPG-VTSISVDTHKYGF-TPKGSSVVL 357 (435)
Q Consensus 287 ~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~g-vd~~~~s~hK~~~-~p~g~g~il 357 (435)
.+ +.+++|+++|++||+++++|++|.++.+. +. ..+..+ ..+...+ -.+++.|+.|... ....+|+++
T Consensus 209 ~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~--~~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 209 VDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASG--DL-DADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEecccCCccCC--ch-hhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 99 77889999999999999999999988641 00 000001 1111112 2455668999843 346679975
No 229
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.74 E-value=3.4e-16 Score=157.74 Aligned_cols=252 Identities=12% Similarity=0.050 Sum_probs=159.7
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++.+++.+.+.++.... .......+......++++.+++++|.+ ..++.++|++|+..++..+.... +
T Consensus 62 ~p~v~~a~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~la~~~g~~---~~~~~~sG~~an~~ai~~l~~~~------~ 131 (407)
T PRK09064 62 HPKVIEAMIEALDRCGAGA-GGTRNISGTNHYHVELERELADLHGKE---AALVFTSGYVSNDATLSTLAKLI------P 131 (407)
T ss_pred CHHHHHHHHHHHHHcCCCC-CCcCcCccCHHHHHHHHHHHHHHhCCC---cEEEECcHHHHHHHHHHHHhCCC------C
Confidence 7899999999887753321 111112233556677778888888742 34555667889998888875421 1
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
+..|+.....|.+....+...++++..++. .|++++++.++ +++++|++++++||+|.+.++++|.++|++
T Consensus 132 ~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~ 206 (407)
T PRK09064 132 DCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIAEICDLADK 206 (407)
T ss_pred CCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHHHHHHHHHH
Confidence 123555556788887888888888766653 36777777775 468899999999999999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
||+++++||+|+.+.+ ...|.+... .+. ...+|+++.+++|. +++.| |+++ .++++.+........|.
T Consensus 207 ~~~~livDEa~~~G~~---g~~g~g~~~~~~~-~~~~div~~t~sKa-~g~~G-G~~~-~~~~~~~~l~~~~~~~~---- 275 (407)
T PRK09064 207 YNALTYLDEVHAVGMY---GPRGGGIAERDGL-MDRIDIIEGTLAKA-FGVMG-GYIA-GSAALVDAVRSYAPGFI---- 275 (407)
T ss_pred cCCEEEEECCCccccc---CCCCCChHHhcCC-CCCCeEEEEecchh-hhccC-ceEe-cCHHHHHHHHHhCcccc----
Confidence 9999999999974332 112222111 111 12458888899998 46555 6644 45554432211112211
Q ss_pred CCCccccCCCchHHHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHhc
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFGFEA-QVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g-~~~~~~~~~~~~~~~~~~l 426 (435)
...+.+....+++.++++.+...+ ..+++++..+.+.+.++++
T Consensus 276 ----~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 319 (407)
T PRK09064 276 ----FTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA 319 (407)
T ss_pred ----ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 111223333456667777665433 3466666777777766653
No 230
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=6.7e-17 Score=162.87 Aligned_cols=154 Identities=23% Similarity=0.226 Sum_probs=123.2
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHcCCEEEEEecC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~g~~v~~vp~~ 255 (435)
+.+.++++.|.+ ..++|+||+.|+..++.++.++++. |+++++.|++ +...++..|++++.++.
T Consensus 69 Le~~lA~leg~~---~al~~~sG~~Ai~~al~~ll~~GD~--------Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~- 136 (431)
T PRK08248 69 FEKRIAALEGGI---GALAVSSGQAAITYSILNIASAGDE--------IVSSSSLYGGTYNLFAHTLPKLGITVKFVDP- 136 (431)
T ss_pred HHHHHHHHhCCC---cEEEECCHHHHHHHHHHHHhCCCCE--------EEEccCchhhHHHHHHHHHHhCCEEEEEECC-
Confidence 444677777753 5689999999999999998877776 9999998876 34456678999999985
Q ss_pred CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 256 SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 256 ~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.|++++++++++++++|++++|+||||.+.|+++|.++|+++|+++++|++++... ...++ ..|
T Consensus 137 ----~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~---------~~~pl---~~g 200 (431)
T PRK08248 137 ----SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY---------LLRPI---EHG 200 (431)
T ss_pred ----CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc---------cCChh---HcC
Confidence 37899999999999999999999999999999999999999999999999985321 11232 458
Q ss_pred ccEEEecCCCCCCccC-CcEEEEEeCC
Q psy10210 336 VTSISVDTHKYGFTPK-GSSVVLYRDL 361 (435)
Q Consensus 336 vd~~~~s~hK~~~~p~-g~g~il~~~~ 361 (435)
+|+++.|.||++.++. .+|.+++.+.
T Consensus 201 aDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 201 ADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred CCEEEEcCccccCCCCCceEEEEEeCC
Confidence 9999999999965553 2566566443
No 231
>PLN02271 serine hydroxymethyltransferase
Probab=99.74 E-value=3.4e-16 Score=157.53 Aligned_cols=235 Identities=15% Similarity=0.088 Sum_probs=165.3
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC---CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH------
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPE---TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA------ 241 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~---~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~------ 241 (435)
..+.++|.-+.+...++||++.. .++-.. +|+.|+..++.++.+++|. |+..+..|.++...
T Consensus 190 ~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PGD~--------IL~ldl~~GGHlshg~~~~~ 260 (586)
T PLN02271 190 QYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPGDR--------IMGLDSPSGGHMSHGYYTPG 260 (586)
T ss_pred hhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCCCE--------EEEecCCCCCchhccccccc
Confidence 34668888889999999997763 244433 7899999999999999887 88877766654332
Q ss_pred ---HHHcCCEEEEEe--cC-CCccccHHHHHH-HhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccch
Q psy10210 242 ---ANYFGMKVKHIR--LT-SSYTVDLAALQS-AITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314 (435)
Q Consensus 242 ---~~~~g~~v~~vp--~~-~~~~~d~~~l~~-~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~ 314 (435)
+...|..+..+| ++ +++.+|.+++++ +...++++|++.+..+| ..-|++++.++|+++|+++++|.+|..+
T Consensus 261 g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aG 338 (586)
T PLN02271 261 GKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISG 338 (586)
T ss_pred ccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECccccc
Confidence 244566666665 65 678999999998 66789999999888887 5689999999999999999999999887
Q ss_pred hhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC----C-------CCCc
Q psy10210 315 LAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN----Y-------GSPS 383 (435)
Q Consensus 315 ~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~----~-------~~~~ 383 (435)
+.+- +.-..|++ ++|+++.++|||+.||.| |+++++++. ........-.|.+.. + .-|.
T Consensus 339 LIa~----g~~~sP~~----~aDvvt~TTHKtLrGPrG-G~I~~r~~~-~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPg 408 (586)
T PLN02271 339 LVAA----KECVNPFD----YCDIVTSTTHKSLRGPRG-GIIFYRKGP-KLRKQGMLLSHGDDNSHYDFEEKINFAVFPS 408 (586)
T ss_pred cccc----CcCCCCCc----CCcEEEeCCcccCCCCCc-eEEEecccc-cccccCCccccccccccHHHHHHhhcccCCc
Confidence 7631 11111333 589999999999999999 887886531 111000011111110 0 0133
Q ss_pred cccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 384 VSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 384 ~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.|+.-...+|+...+++......|.+..+++.++++.+.+.|
T Consensus 409 lqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L 451 (586)
T PLN02271 409 LQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASAL 451 (586)
T ss_pred cccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 4444444556777777887766777777777777777776665
No 232
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.74 E-value=8e-17 Score=159.62 Aligned_cols=195 Identities=15% Similarity=0.087 Sum_probs=133.5
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhh
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAIT 270 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~ 270 (435)
+.+++++|++|+.+++.++.++++. |+++++.|..+...+ ...|++++.++.++++. .+.
T Consensus 67 ~~v~~~sG~~Ai~~~l~all~~Gd~--------Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~--------~~~ 130 (366)
T PRK07582 67 EALVFPSGMAAITAVLRALLRPGDT--------VVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE--------AAL 130 (366)
T ss_pred CEEEECCHHHHHHHHHHHhcCCCCE--------EEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH--------Hhc
Confidence 4677777889999999988777766 999999998876544 44699999998753221 234
Q ss_pred cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc
Q psy10210 271 GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP 350 (435)
Q Consensus 271 ~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p 350 (435)
+++++|++++|+||+|.+.++++|.++|+++|+++++|++|+.. .+..+++ .|+|+++.|+|||+.|+
T Consensus 131 ~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~---------~~~~p~~---~g~Divv~S~sK~l~G~ 198 (366)
T PRK07582 131 AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATP---------LGQRPLE---LGADLVVASDTKALTGH 198 (366)
T ss_pred cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCc---------cccCchh---cCCcEEEecccccccCC
Confidence 68999999999999999999999999999999999999998531 1122444 37899999999997777
Q ss_pred CC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHH-HHHHHHHHHHHHHHHhcC
Q psy10210 351 KG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQV-WICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 351 ~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~-~~~~~~~~~~~~~~~~l~ 427 (435)
.| .|+++.+++++.+...... ...|. ... ...+|..++.+..-..+ ++..++.+.+.+.+++.+
T Consensus 199 ~g~~~G~v~~~~~~l~~~l~~~~-~~~g~----------~~~--~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p 265 (366)
T PRK07582 199 SDLLLGYVAGRDPELMAAVERWR-LLAGA----------IPG--PFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHP 265 (366)
T ss_pred CCeeEEEEEcCcHHHHHHHHHHH-HHhCC----------CCC--HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 76 4876666666544321111 11111 111 13566666655532222 444445555556666666
Q ss_pred Ccc
Q psy10210 428 DLW 430 (435)
Q Consensus 428 ~l~ 430 (435)
.+.
T Consensus 266 ~v~ 268 (366)
T PRK07582 266 AVR 268 (366)
T ss_pred Ccc
Confidence 654
No 233
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=1.2e-16 Score=161.09 Aligned_cols=153 Identities=20% Similarity=0.211 Sum_probs=123.7
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~ 254 (435)
++.+.++++.|.. ..+++++|++|+.+++.++..+++. |+++.+.|.+.. ..+...|++++.++.
T Consensus 67 ~le~~lA~l~g~~---~al~~~SG~~Ai~~al~all~pGd~--------VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 67 VLEERVAALEGGT---AALAVASGHAAQFLVFHTLLQPGDE--------FIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred HHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHHhCCCCE--------EEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 4455777778765 3688899999999999999877776 999999998743 446778999998875
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++++|++++.... ..++ ..
T Consensus 136 ~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~---------~~pl---~~ 198 (427)
T PRK05994 136 D-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL---------IRPI---EH 198 (427)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc---------CCcc---cc
Confidence 3 78999999999999999999999999999999999999999999999999864321 1233 35
Q ss_pred CccEEEecCCCCCCccCC-cEEEEEe
Q psy10210 335 GVTSISVDTHKYGFTPKG-SSVVLYR 359 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g-~g~il~~ 359 (435)
|+|+++.|.|||+.++.+ .|.+++.
T Consensus 199 gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 199 GADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CCcEEEEcCccccCCCCCcEEEEEEe
Confidence 899999999999665543 4554553
No 234
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.73 E-value=5.8e-16 Score=157.61 Aligned_cols=238 Identities=17% Similarity=0.109 Sum_probs=149.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEE---cCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC---Cchh---HHHHH
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPETCGCM---TSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT---AHPA---FDKAA 242 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~~~~~---t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~---~~~~---~~~~~ 242 (435)
...++|..+++..+++|+.... ...+ .++|+.|+..++.++.+++|. |+..+. .|.+ .....
T Consensus 77 ~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~AN~av~~aL~~pgD~--------Il~~d~~~gGhl~H~~~~~g~ 147 (475)
T PLN03226 77 YIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPANFAVYTALLQPHDR--------IMGLDLPHGGHLSHGYQTDGK 147 (475)
T ss_pred hHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHHHHHHHHHhCCCCCE--------EEECCCCcCcchhhhhhhccc
Confidence 4567777778888899988765 2222 378899999999999988887 887442 3333 22222
Q ss_pred HHcCCEE--E--EEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210 243 NYFGMKV--K--HIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA 316 (435)
Q Consensus 243 ~~~g~~v--~--~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~ 316 (435)
+..+... . .++.+ +++.+|++++++++.. ++++|++.. ++ +|...|+++|.++|++||+++++|++|+.++.
T Consensus 148 ~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~~-S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli 225 (475)
T PLN03226 148 KISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAGA-SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLV 225 (475)
T ss_pred ccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEec-Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcc
Confidence 2222222 2 33344 6788999999998863 677666533 33 67788999999999999999999999988776
Q ss_pred hcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC---CC--CCCCCCCCccccCCCch
Q psy10210 317 PFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS---DW--PGGNYGSPSVSGSRSGG 391 (435)
Q Consensus 317 ~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~---~~--~gg~~~~~~~~gsr~~~ 391 (435)
+.. +.+ .++ .++|+++.++||++.||.| |+++++++ .......... ++ .-.....+...++.+..
T Consensus 226 ~~~---~~~-~p~----~~~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~ 295 (475)
T PLN03226 226 AAQ---EAA-SPF----EYCDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNH 295 (475)
T ss_pred cCC---CCC-CCC----CCCeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhccccCCccCCCchHH
Confidence 321 111 122 2699999999999889998 77777653 2211000000 00 00000012233444555
Q ss_pred HHHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 392 IIATCWAAMMYFG---FEAQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 392 ~ia~~~a~l~~~g---~~g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
.+++..++++.+- .+.|.+++.++.+.+.+.+.+ .++..
T Consensus 296 ~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l 337 (475)
T PLN03226 296 TIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKL 337 (475)
T ss_pred HHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEE
Confidence 5667777777764 445566666666666665554 34443
No 235
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=2.7e-16 Score=156.64 Aligned_cols=159 Identities=18% Similarity=0.182 Sum_probs=120.1
Q ss_pred HHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCC-Ccc
Q psy10210 182 KMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTS-SYT 259 (435)
Q Consensus 182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~-~~~ 259 (435)
+++++.+|. +++++|+||++|+.+++.++ .++++. |+++.++|+++..++...|++++.+++++ ++.
T Consensus 38 ~~la~~~g~---~~~v~~~sgt~al~~~l~~~~~~~Gd~--------Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~ 106 (375)
T PRK11706 38 QWLEQRFGS---AKVLLTPSCTAALEMAALLLDIQPGDE--------VIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMN 106 (375)
T ss_pred HHHHHHhCC---CeEEEECCHHHHHHHHHHHhCCCCCCE--------EEECCCCcHHHHHHHHHcCCEEEEEecCCCcCC
Confidence 344555554 27899999999999988766 355555 99999999999999999999999999984 467
Q ss_pred ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEE
Q psy10210 260 VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSI 339 (435)
Q Consensus 260 ~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~ 339 (435)
+|++++++++++++++|++++ ++|...++++|.++|++||+++|+|++|+.+.. +. |. +.. . ..|.-
T Consensus 107 ~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~-~~---~~---~~g--~-~~~~~ 173 (375)
T PRK11706 107 IDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST-YK---GR---ALG--T-IGHIG 173 (375)
T ss_pred cCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc-cC---Ce---eee--c-CcCEE
Confidence 999999999999999998764 589999999999999999999999999976542 11 11 110 0 12555
Q ss_pred EecCC--CCCCccCCcEEEEEeCCcccc
Q psy10210 340 SVDTH--KYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 340 ~~s~h--K~~~~p~g~g~il~~~~~~~~ 365 (435)
++|+| |.+..+.| |+++++++++.+
T Consensus 174 ~~Sf~~~K~l~~g~g-G~~~~~~~~~~~ 200 (375)
T PRK11706 174 CFSFHETKNYTAGEG-GALLINDPALIE 200 (375)
T ss_pred EEeCCCCccccccCC-eEEEECCHHHHH
Confidence 66666 98533333 555666666543
No 236
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.73 E-value=2.9e-16 Score=157.09 Aligned_cols=254 Identities=13% Similarity=0.053 Sum_probs=161.9
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++++++.+.+.++.... ..+..+-+......++++.+++++|.+. .+++++| +.++..++.++.+++|.
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~-~~sr~~yg~~~~~~~LE~~lA~~~g~e~--al~~~sG-~~a~~~~i~~l~~~GD~---- 84 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGS-CGPRGFYGTIDAHLELEQCMAEFLGTES--AILYSDG-ASTTSSTVAAFAKRGDL---- 84 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCC-cccccccCChHHHHHHHHHHHHHhCCCc--EEEecCc-HHHHHHHHHHhCCCCCE----
Confidence 47899999999988754332 2222222333466777888999998752 4555554 55666888888777776
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-----------cCceEEEEeCCCCCcccccCHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-----------GNTVMLVGSMPNFPYGTMDDIG 292 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-----------~~~~~v~~~~p~nptG~~~~i~ 292 (435)
|+++++.|.++...+...+++++.++.++ .-|++.+.+.+. +++++|+++.+.||+|.+.+++
T Consensus 85 ----Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~ 158 (392)
T PLN03227 85 ----LVVDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLK 158 (392)
T ss_pred ----EEEeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHH
Confidence 99999999999888888888887777532 123444443442 3688999999999999999999
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCC-CCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFS-LPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~-~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~ 370 (435)
+|.++|++||+++|+|++++.... ...|.+.. -+... ..++|+++.+.+|+ ++|.| |+++ .++++.+...
T Consensus 159 ~i~~l~~~~g~~livDe~~~~g~~---g~~G~g~~~~~g~~p~~~~Div~~slsk~-~g~~g-g~v~-~~~~~~~~~~-- 230 (392)
T PLN03227 159 ELVALKEEFHYRLILDESFSFGTL---GKSGRGSLEHAGLKPMVHAEIVTFSLENA-FGSVG-GMTV-GSEEVVDHQR-- 230 (392)
T ss_pred HHHHHHHHcCCEEEEECccccccc---CCCCCcHHHHcCCCCCCCceEEEeechhh-hhccC-cEEe-cCHHHHHHHH--
Confidence 999999999999999999972222 11121100 01111 23789999999998 56664 5544 4445443211
Q ss_pred cCCCCCCCCCCCccccCCCchHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAM-MYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
....+ .+..++-+....+++.+++ ..+..+...++++++.+++.+.+++
T Consensus 231 -~~~~~-----~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 231 -LSGSG-----YCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred -HhCcC-----ccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 10111 1222332222222333333 3344556777778777777777763
No 237
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=1.7e-16 Score=159.93 Aligned_cols=156 Identities=19% Similarity=0.172 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEE
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHI 252 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~v 252 (435)
..++++.++++.|.. ..+++++|+.|+.+++.++..+++. ||++...|.+.. ..+...|++++.+
T Consensus 71 ~~~le~~la~l~g~~---~~v~fsSG~~Ai~~al~~ll~~Gd~--------VI~~~~~y~~t~~~~~~~l~~~Gi~v~~v 139 (437)
T PRK05613 71 VEALENRIASLEGGV---HAVAFASGQAAETAAILNLAGAGDH--------IVTSPRLYGGTETLFLVTLNRLGIEVTFV 139 (437)
T ss_pred HHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHhcCCCCE--------EEECCCccHHHHHHHHHHHHhcCeEEEEE
Confidence 344556778888773 3456666679999888887666665 999999999863 4457789999999
Q ss_pred ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC
Q psy10210 253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS 332 (435)
Q Consensus 253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~ 332 (435)
+ +. .|+++++++++++|++|+++.+.||+|.+.|+++|.++|+++|+++|+|++++.+.. .+..
T Consensus 140 d-~~---~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~------------~~p~ 203 (437)
T PRK05613 140 E-NP---DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL------------VRPL 203 (437)
T ss_pred C-CC---CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc------------cChH
Confidence 7 32 288999999999999999999999999999999999999999999999999864322 1222
Q ss_pred CCCccEEEecCCCCCCccC--CcEEEEEeC
Q psy10210 333 LPGVTSISVDTHKYGFTPK--GSSVVLYRD 360 (435)
Q Consensus 333 ~~gvd~~~~s~hK~~~~p~--g~g~il~~~ 360 (435)
..|+|++++|+|||+ +|. ++|.+++.+
T Consensus 204 ~~GaDivv~S~~K~l-~G~gd~~gG~vv~~ 232 (437)
T PRK05613 204 ELGADVVVASLTKFY-TGNGSGLGGVLIDG 232 (437)
T ss_pred HhCCCEEEeecccee-cCCCcceeEEEEec
Confidence 458999999999995 554 345555544
No 238
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.73 E-value=2.2e-15 Score=160.91 Aligned_cols=325 Identities=13% Similarity=0.124 Sum_probs=207.0
Q ss_pred hchhhHHHHHHHHHHHH----HHHHhh-hhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC--
Q psy10210 71 KIPAVRKKLEEETGKVA----KLFQDD-IKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY-- 143 (435)
Q Consensus 71 ~lp~~~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-- 143 (435)
++-...+.+++||+.+. +++.+. ++... ...-..++|+. .++.++++.+.+...++.. + ..+.+.+.|.
T Consensus 2 h~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~i-~~~~~l~lp~~-~sE~e~~~~~~~la~~N~~-~-~~fig~G~y~~~ 77 (939)
T TIGR00461 2 HLGPSPSDQKKMLKTMGYSDLNALIEQLVPPNI-LKRRPLQLEAP-SKEYEALAHLKKIASKNHK-F-KSYIGMGYYGTI 77 (939)
T ss_pred CCCcCHHHHHHHHHhcCCCCHHHHhhccCCHHH-hcCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-c-cccCCCCcCCCc
Confidence 34344556677776543 444444 22211 11112467774 7999999999998877532 1 1222222222
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
-++.+.+.+.+.-+-+....|++++.+++..++..+...++++++|.+.. +..+..++|.+...++.+.+... +
T Consensus 78 ~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~d~atA~aEa~~~a~~~~~----~- 151 (939)
T TIGR00461 78 LPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVA-NASLLDEGTAAAEAMALSFNVSK----K- 151 (939)
T ss_pred CChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChh-hhhccchhhHHHHHHHHHHHhhc----C-
Confidence 24555546654333222336999999999999999999999999999875 77889999988887777764321 1
Q ss_pred CCCeEEEeCCCchhHHHHH----HHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++.+|++++..|+...... +..|++++.++ ++++++.+ +++++++.+|++ .|.++|+++|+++++
T Consensus 152 ~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h 220 (939)
T TIGR00461 152 KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALH 220 (939)
T ss_pred CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHH
Confidence 2457999999999976544 46788888874 34566555 588899999987 999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC----ccCCcEEEEEeCCcccccccc----cc
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF----TPKGSSVVLYRDLKYKHCQYF----VT 371 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~----~p~g~g~il~~~~~~~~~~~~----~~ 371 (435)
+.|.+++++.-.-.+.. ..+..+.|+|+++.+.++||. |.++.|++.++++ +.+..-. ..
T Consensus 221 ~~gal~~~~ad~~al~l-----------l~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~-l~r~lPgrivG~s 288 (939)
T TIGR00461 221 SHKSLVSVAADLMALTL-----------LTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDE-YNRKMPGRIVGVS 288 (939)
T ss_pred HcCCEEEEEechHHhCC-----------cCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHh-hHhhCCCCceeEE
Confidence 99999999776543322 233445689999888888854 3344788777765 3222100 00
Q ss_pred CCCCCCC-CC----C--CccccCCC------chHHHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 372 SDWPGGN-YG----S--PSVSGSRS------GGIIATCWAA--MMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 372 ~~~~gg~-~~----~--~~~~gsr~------~~~ia~~~a~--l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
.+-.|.. |. + ..+.--+. +..+.+..++ +.++|.+|+++..+++..++..+.+.|.+
T Consensus 289 ~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~ 360 (939)
T TIGR00461 289 KDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN 360 (939)
T ss_pred ecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111110 00 0 00000001 1122222333 77899999999888888777766665544
No 239
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=2.9e-16 Score=158.26 Aligned_cols=157 Identities=19% Similarity=0.179 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEe
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIR 253 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp 253 (435)
.++++.++++.|.+ ..+++++|++|+..++.++..+++. |+++++.|.+. ...+...|++++.++
T Consensus 60 ~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~~l~~~Gd~--------Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 60 DVLEQRIAALEGGV---AALAVASGQAAITYAILNLAQAGDN--------IVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred HHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 35566778888763 5689999999999999998877776 99999988763 445677899999988
Q ss_pred cCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 254 LTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 254 ~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
.+ |++++++++++++++|++++|+||+|.+.|+++|.++|++||+++++|++|+.+.. ..++ .
T Consensus 129 ~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~---------~~~l---~ 191 (418)
T TIGR01326 129 PD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL---------CRPI---D 191 (418)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc---------CCch---h
Confidence 53 89999999999999999999999999999999999999999999999999974321 1122 3
Q ss_pred CCccEEEecCCCCCCcc-CCcEEEEEeCCc
Q psy10210 334 PGVTSISVDTHKYGFTP-KGSSVVLYRDLK 362 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p-~g~g~il~~~~~ 362 (435)
.|+|+++.|++|++.++ ..+|+++++.+.
T Consensus 192 ~g~Divv~S~sK~l~g~G~~lGg~v~~~~~ 221 (418)
T TIGR01326 192 HGADIVVHSATKYIGGHGTAIGGVIVDGGK 221 (418)
T ss_pred cCCeEEEECccccccCCccceEEEEEeccc
Confidence 47899999999996443 336776776544
No 240
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.73 E-value=2.5e-16 Score=158.99 Aligned_cols=254 Identities=17% Similarity=0.079 Sum_probs=167.5
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+..... +.. .....+...++.+.++++++.+.+ ++++++||++|+..++++++....
T Consensus 53 ~~p~v~~a~~~~~~~~~~---~~~--~~~~~~~~~~l~~~l~~~~~~~~~-~v~~~~sgsea~~~al~~~~~~~~----- 121 (413)
T cd00610 53 NHPEVVEALKEQLAKLTH---FSL--GFFYNEPAVELAELLLALTPEGLD-KVFFVNSGTEAVEAALKLARAYTG----- 121 (413)
T ss_pred CCHHHHHHHHHHHHhCcC---ccC--cccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHHHHHHHHHHHHHHcC-----
Confidence 589999999998864211 111 112457788888999999986444 899999999999999999874321
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCC------CccccHHHHHHHhhc---CceEEEEeCC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTS------SYTVDLAALQSAITG---NTVMLVGSMP 281 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~------~~~~d~~~l~~~i~~---~~~~v~~~~p 281 (435)
+++|++.++.|++....+... + .+++.+|.+. ++..|++++++.+.+ ++++++++..
T Consensus 122 -~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~ 200 (413)
T cd00610 122 -RKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPI 200 (413)
T ss_pred -CCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccc
Confidence 245999999888855443332 1 2356666552 234589999999876 5678888777
Q ss_pred CCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEE
Q psy10210 282 NFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL 357 (435)
Q Consensus 282 ~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il 357 (435)
++++|.+.+ +++|.++|++||+++|+||+|+++.. .|.. ..++......|++++| |++.++.++|+++
T Consensus 201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~-----~g~~-~~~~~~~~~~d~~t~s--K~l~~g~~~g~~~ 272 (413)
T cd00610 201 QGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGR-----TGKM-FAFEHFGVEPDIVTLG--KGLGGGLPLGAVL 272 (413)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Ccch-hhHhhcCCCCCeEEEc--ccccCccccEEEE
Confidence 788898755 99999999999999999999987522 1110 0111111124666555 9866667789866
Q ss_pred EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
. ++++.+.. ........+ +. +.+....+++.++++.+..+.+.++++++.+.+.+.++.+
T Consensus 273 ~-~~~~~~~~-~~~~~~~~~-----t~--~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 273 G-REEIMDAF-PAGPGLHGG-----TF--GGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLREL 332 (413)
T ss_pred E-cHHHHHhh-ccCCCCCCC-----CC--CcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 5 45554431 000111111 11 1223344677788888877778888888888888777655
No 241
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.73 E-value=9e-17 Score=158.77 Aligned_cols=165 Identities=21% Similarity=0.168 Sum_probs=119.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVK 250 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~ 250 (435)
|...++|+ .++++.|. +.+++++||++|+.+++. +.+++|. |+++.+.|.+....+.....+-
T Consensus 54 p~~~~le~----~lA~leg~---~~~v~~~sG~aAi~~~l~-~l~~GD~--------VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 54 PTRAKLEE----TLAAIESA---DYALATSSGMSAIVLAFS-VFPVGSK--------VVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred ccHHHHHH----HHHHHhCC---CeEEEeCCHHHHHHHHHH-HhCCCCE--------EEEecCCcCchHHHHHHHHhcC-
Confidence 44445444 55666654 368999999999999994 5566665 9999998877544332221000
Q ss_pred EEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 251 HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 251 ~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
.+.+ ++..|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++|+.... ..|+
T Consensus 117 ~~~~--~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~---------~~pl- 184 (364)
T PRK07269 117 RFHF--TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIY---------QRPI- 184 (364)
T ss_pred cEEE--EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc---------CCch-
Confidence 1111 133589999999999999999999999999999999999999999999999999753221 1233
Q ss_pred CCCCCccEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 331 FSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 331 ~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
..|+|+++.|.+|++.|+.. .|+++.+++++.+.
T Consensus 185 --~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~ 220 (364)
T PRK07269 185 --ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEK 220 (364)
T ss_pred --hhCCcEEEecCceeccCCCcccceEEEeCcHHHHHH
Confidence 35899999999999766544 47767677766543
No 242
>PLN02483 serine palmitoyltransferase
Probab=99.73 E-value=5.5e-16 Score=158.95 Aligned_cols=199 Identities=13% Similarity=0.064 Sum_probs=137.1
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
++...+++.+++.++... ...+...-+......++++.+|+++|.+. .+++++ |..++..++.++.++++.
T Consensus 117 ~~~~~~~~~~ai~~~g~~-~~~sr~~~g~~~~~~ele~~lA~~~g~~~--ai~~~~-G~~an~~~i~al~~~Gd~----- 187 (489)
T PLN02483 117 DEYCTPRVIESLKKYSAS-TCSSRVDGGTTKLHRELEELVARFVGKPA--AIVFGM-GYATNSTIIPALIGKGGL----- 187 (489)
T ss_pred CHHHHHHHHHHHHHhCCC-CCccccccCCcHHHHHHHHHHHHHhCCCc--EEEECC-HHHHHHHHHHHhCCCCCE-----
Confidence 355677777777765322 11222223445667778888999998532 455555 577777888888877776
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-------cCc-----e-EEEEeCCCCCcccccCH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-------GNT-----V-MLVGSMPNFPYGTMDDI 291 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-------~~~-----~-~v~~~~p~nptG~~~~i 291 (435)
|++++++|+++...++..|++++.+|.+ |++++++.+. +++ + +|+++...|++|.+.++
T Consensus 188 ---Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l 259 (489)
T PLN02483 188 ---IISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKL 259 (489)
T ss_pred ---EEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCH
Confidence 9999999999999999999999999864 3455554443 222 4 45555666899999999
Q ss_pred HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
++|.++|++||+++++||+|+.+.. ...|.+.. .++....++|++..+++|. +++.| |+ ++.++++.+.
T Consensus 260 ~~I~~la~~~~~~livDEa~s~g~~---G~~G~g~~~~~~v~~~~~dI~~~SfSKs-~g~~G-G~-i~~~~~li~~ 329 (489)
T PLN02483 260 PEIVAVCKKYKAYVYLDEAHSIGAV---GKTGRGVCELLGVDPADVDIMMGTFTKS-FGSCG-GY-IAGSKELIQY 329 (489)
T ss_pred HHHHHHHHHcCCEEEEECcCccCcc---CCCCCchHHhcCCCcccCcEEEEecchh-cccCc-eE-EEcCHHHHHH
Confidence 9999999999999999999974332 12222211 1222234689999999998 56665 77 4455665544
No 243
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=1.3e-16 Score=159.27 Aligned_cols=150 Identities=16% Similarity=0.089 Sum_probs=118.7
Q ss_pred HHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---HHHHHHcCCEEEEEecCCCc
Q psy10210 182 KMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 182 ~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~~~~~~~g~~v~~vp~~~~~ 258 (435)
+.++++.|... .+++++|+.|+..++.++.++++. |+++++.|++. ...++..|++++.+++
T Consensus 54 ~~la~leg~~~---~v~~ssG~~Ai~~~l~all~~Gd~--------Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~---- 118 (397)
T PRK05939 54 AKITKMEGGVG---TVCFATGMAAIAAVFLTLLRAGDH--------LVSSQFLFGNTNSLFGTLRGLGVEVTMVDA---- 118 (397)
T ss_pred HHHHHHhCCCe---EEEeCCHHHHHHHHHHHHcCCCCE--------EEECCCccccHHHHHHHHHhcCCEEEEECC----
Confidence 35566666643 356666799999999998877776 99999988753 3456678999999986
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccE
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTS 338 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~ 338 (435)
.|+++++++++++|++|++++|+||+|.+.|+++|+++|+++|+++++|++++... .++....|+|+
T Consensus 119 -~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~------------~~~~~~~gaDi 185 (397)
T PRK05939 119 -TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPW------------LFRPKDVGASL 185 (397)
T ss_pred -CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccccc------------ccCccccCCEE
Confidence 37899999999999999999999999999999999999999999999999986431 23344458999
Q ss_pred EEecCCCCCCccCC-cEEEEEe
Q psy10210 339 ISVDTHKYGFTPKG-SSVVLYR 359 (435)
Q Consensus 339 ~~~s~hK~~~~p~g-~g~il~~ 359 (435)
+..|+||++.++.. +|.++..
T Consensus 186 vv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 186 VINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred EEecCeecccCCCCeEEEEEec
Confidence 99999999655422 3554543
No 244
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.72 E-value=1.1e-16 Score=158.19 Aligned_cols=257 Identities=10% Similarity=0.003 Sum_probs=170.2
Q ss_pred hHhHHHHHHHHHHhhc---CCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210 145 QQDLVDLLTEVFGLTS---YTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREE 220 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~---~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~ 220 (435)
++++++++.+.+..+. .+.+...+..+.+.++..++++.+++++|.+.+. .++++++||.+++.++..+..++++
T Consensus 15 p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~- 93 (360)
T PRK05355 15 PEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKK- 93 (360)
T ss_pred CHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCe-
Confidence 4555555555443211 1112223456677889999999999999985433 4555588899999999998876655
Q ss_pred cCCCCCeEEEeCCCchh--HHHHHHHcCCEEEEEecCC-CccccHHHHHH-HhhcCceEEEEeCCCCCccccc-CHHHHH
Q psy10210 221 KGISLPEIVLPTTAHPA--FDKAANYFGMKVKHIRLTS-SYTVDLAALQS-AITGNTVMLVGSMPNFPYGTMD-DIGAIA 295 (435)
Q Consensus 221 ~g~~~~~viv~~~~~~~--~~~~~~~~g~~v~~vp~~~-~~~~d~~~l~~-~i~~~~~~v~~~~p~nptG~~~-~i~~i~ 295 (435)
+++......+ +.+.++..|.. ..++.+. .+..+..++++ ++++++++|.+++..|.||... ++++|
T Consensus 94 -------~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i- 164 (360)
T PRK05355 94 -------ADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT- 164 (360)
T ss_pred -------EEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc-
Confidence 5444444443 56778888865 6666553 55566666666 7878899999999999999996 77776
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc--cCC
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV--TSD 373 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~--~~~ 373 (435)
||++++||++++.+. .++|+.. .|++++|+||+ +||.|+|+++++++.+.+..... ..+
T Consensus 165 -----~g~l~vVDavss~g~-----------~~idv~~--~d~~~~ssqK~-lgP~Glg~l~~s~~~l~~~~~~~~~~~~ 225 (360)
T PRK05355 165 -----GDVPLVADMSSDILS-----------RPIDVSK--FGLIYAGAQKN-IGPAGLTIVIVREDLLGRALPSIPSMLD 225 (360)
T ss_pred -----CCCcEEEEcCccccC-----------ccCCHHH--ccEEEEecccc-ccCCceEEEEECHHHHhhcccCCChHHH
Confidence 899999999986443 3677654 46999999998 57999999888876553311100 000
Q ss_pred CCCCCCCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 374 WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 374 ~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
|... .......++.+...+.++.++++.+..+ |+.++.++..+..+.+++.+.++..
T Consensus 226 ~~~~-~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~ 283 (360)
T PRK05355 226 YKTH-ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF 283 (360)
T ss_pred HHHH-HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0000 0112234677777777888888887666 5666666666655555555554443
No 245
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.72 E-value=4.9e-16 Score=155.03 Aligned_cols=252 Identities=15% Similarity=0.046 Sum_probs=161.7
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|.+.+++.+.+......... + ..+...++.+.+++++|.+ ++++++||++|+.+++++++..... +|.+
T Consensus 45 ~p~v~~a~~~~~~~~~~~~~~----~--~~~~~~~l~~~la~~~g~~---~~~~~~sg~~a~~~a~~~~~~~~~~-~~~~ 114 (379)
T TIGR00707 45 HPKLVEALKEQLEKLVHVSNL----Y--YTEPQEELAEKLVEHSGAD---RVFFCNSGAEANEAALKLARKYTGD-KGKE 114 (379)
T ss_pred CHHHHHHHHHHHhhccccccc----c--CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHhhc-cCCC
Confidence 688999998888764221111 1 2345667778888888763 7999999999999999987543221 1222
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEE----EEecCCCccc----cHHHHHHHhhcCceEEEEeCCCCCcccc----cCHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVK----HIRLTSSYTV----DLAALQSAITGNTVMLVGSMPNFPYGTM----DDIG 292 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~----~vp~~~~~~~----d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i~ 292 (435)
+++|++++++|+.+...+...+.... ..|+..+... |++++++.+++++++|+++++++++|.. ++++
T Consensus 115 ~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~~~~~~l~ 194 (379)
T TIGR00707 115 KKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNPASAEFLK 194 (379)
T ss_pred CCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCccCCHHHHH
Confidence 45699999999887766665554322 1233222222 8999999998889999998887777864 4589
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS 372 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~ 372 (435)
+|.++|++||+++|+||+|+++... |.. .++.......|+++ ++|...++.++|+++.+ +++.+... .
T Consensus 195 ~i~~l~~~~~~~~i~De~~~~~~~~-----g~~-~~~~~~~~~~d~~t--~sK~~~~G~riG~~~~~-~~~~~~~~---~ 262 (379)
T TIGR00707 195 ALREICKDKDALLIFDEVQTGIGRT-----GKF-FAYEHYGIEPDIIT--LAKGLGGGVPIGATLAK-EEVAEAFT---P 262 (379)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcc-----chh-hhHHhcCCCCCEEE--EcccccCCcccEEEEEc-HHHHhhhc---C
Confidence 9999999999999999999876331 110 01111111235554 46986555678986654 55544321 1
Q ss_pred CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
...+.. .. -+....+++.++++.+...++.+++++..+.+.+.+++
T Consensus 263 ~~~~~~-----~~--~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (379)
T TIGR00707 263 GDHGST-----FG--GNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEE 308 (379)
T ss_pred CCCCCC-----CC--CCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 111111 11 12334457777788776667778888877777766654
No 246
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.72 E-value=8.7e-16 Score=154.74 Aligned_cols=199 Identities=16% Similarity=0.157 Sum_probs=136.9
Q ss_pred hHhHHHHHHHHH-HhhcCCCCCCCC--cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210 145 QQDLVDLLTEVF-GLTSYTNPLHPD--IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK 221 (435)
Q Consensus 145 ~~~l~~~i~~~~-~~~~~~~~~~~~--~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~ 221 (435)
+|.+++++...+ .++..+.+...- ..+...++|.-+.+.+++++|.+. ..+++++|+.|+..++.++..++|.
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A~~~~l~al~~~GD~-- 116 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQANGAVYLALLKPGDT-- 116 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHHHHHHHHHhcCCCCE--
Confidence 566666666664 443222111111 025677777777789999998763 3456789999999999999888877
Q ss_pred CCCCCeEEEeCCCchh-HHHHHHH--cCCEE--EEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHH
Q psy10210 222 GISLPEIVLPTTAHPA-FDKAANY--FGMKV--KHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAI 294 (435)
Q Consensus 222 g~~~~~viv~~~~~~~-~~~~~~~--~g~~v--~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i 294 (435)
|++++..|.+ +...++. .+... ..++++ .++.+|++++++.+.. ++++|+++.+. +|...|+++|
T Consensus 117 ------Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~dl~~l 188 (416)
T PRK13034 117 ------ILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELDFARF 188 (416)
T ss_pred ------EEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--cccccCHHHH
Confidence 9999999977 2222221 12222 344444 4567899999998854 67888876554 4677899999
Q ss_pred HHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 295 AKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 295 ~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
.++|++||+++++|++++.++... |. ..... .++|++++++||++.||.| |+++.+++.+.
T Consensus 189 ~~la~~~g~~livD~Aha~G~~~~----g~--~~~~~--~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~ 249 (416)
T PRK13034 189 REIADEVGALLMVDMAHIAGLVAA----GE--HPNPF--PHAHVVTTTTHKTLRGPRG-GMILTNDEEIA 249 (416)
T ss_pred HHHHHHcCCEEEEeCcccccCccc----CC--CCCCC--CCceEEEEeCcccCCCCCC-eEEEECcHHHH
Confidence 999999999999999998766531 21 11122 3589999999999777877 66566665543
No 247
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.3e-16 Score=158.11 Aligned_cols=160 Identities=13% Similarity=0.073 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcC
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFG 246 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g 246 (435)
|....+|. .++++-|+. ..+++++|+.|+.+++.++.++++. |++++..|.+....+ +.+|
T Consensus 62 Pt~~~le~----~la~LEg~~---~a~~~~SGmaAi~~~~~~ll~~GD~--------Vv~~~~~Yg~t~~l~~~~l~~~G 126 (395)
T PRK08114 62 LTHFSLQE----AMCELEGGA---GCALYPCGAAAVANAILAFVEQGDH--------VLMTGTAYEPTQDFCSKILSKLG 126 (395)
T ss_pred hhHHHHHH----HHHHHhCCC---eEEEEhHHHHHHHHHHHHHcCCCCE--------EEEeCCCcHHHHHHHHHHHHhcC
Confidence 44555554 556666553 4677888999999999998877776 999999998866554 5679
Q ss_pred CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC--CcEEEeccccchhhhcccccCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG--IPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~--~~livD~~~~~~~~~~~~~~g~ 324 (435)
+++..++. .|.++++++++++|++|++++|+||+|.+.|+++|+++|+++| ++++||.+++...
T Consensus 127 i~v~~vd~-----~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~--------- 192 (395)
T PRK08114 127 VTTTWFDP-----LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGV--------- 192 (395)
T ss_pred cEEEEECC-----CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcccc---------
Confidence 99998874 3678999999999999999999999999999999999999985 9999999986432
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCcc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKY 363 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~ 363 (435)
.++....|+|+++.|.|||++|+. +.|++ +.+++.
T Consensus 193 ---~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v-~~~~~~ 229 (395)
T PRK08114 193 ---LFKALDFGIDISIQAGTKYLVGHSDAMIGTA-VANARC 229 (395)
T ss_pred ---ccCHHHcCCcEEEEcCcccccCCCcceeEEE-EcCHHH
Confidence 245556699999999999988884 56754 444443
No 248
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.72 E-value=1.3e-15 Score=153.51 Aligned_cols=253 Identities=12% Similarity=-0.009 Sum_probs=159.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++++++.+++.++.... .......+..+...++.+.+++++|.+ ..+++++|++|+..++.++....
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~-~~s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~~An~~ai~~l~~~~------ 129 (406)
T PRK13393 60 QHPAVLAAMHEALDTCGAGA-GGTRNISGTNHYHVLLEAELADLHGKE---AALLFTSGYVSNWAALSTLGSRL------ 129 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCC-cccccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHHHhhcCC------
Confidence 38999999999998754322 111112233446677888999999863 44556666789999998764310
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
++..|++....|.++...++..|.+++.+|. .|++++++.+. +++++|++++++|++|.+.|+++|.++|+
T Consensus 130 ~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~ 204 (406)
T PRK13393 130 PGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAEICDVAE 204 (406)
T ss_pred CCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHHHHHHHH
Confidence 1234777778999988888888988877764 36667776664 35789999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNY 379 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~ 379 (435)
+||+++++|++|+.+++ ...|.+..........+|++..++.|.. +..| |++ +.++++.+........|.
T Consensus 205 ~~~~~livDea~~~g~~---g~~G~g~~~~~~~~~~~~i~~~tlsKa~-g~~G-G~~-~~~~~~~~~l~~~~~~~~---- 274 (406)
T PRK13393 205 KHGAMTYLDEVHAVGLY---GPRGGGIAEREGLADRLTIIEGTLAKAF-GVMG-GYI-TGSAALCDFIRSFASGFI---- 274 (406)
T ss_pred HcCCEEEEECCcccccc---CCCCCchhhhcCCCCCCeEEEEeCchhh-cccC-cee-eCCHHHHHHHHHhCcCce----
Confidence 99999999999984433 1122211001111233678878899984 5444 664 445554433211111111
Q ss_pred CCCccccCCCchHHHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHh
Q psy10210 380 GSPSVSGSRSGGIIATCWAAMMYFGFEAQ-VWICVRYHFNYKSCLQN 425 (435)
Q Consensus 380 ~~~~~~gsr~~~~ia~~~a~l~~~g~~g~-~~~~~~~~~~~~~~~~~ 425 (435)
..++.+....+++.++++.+...+. .++.++..+++.+.+++
T Consensus 275 ----~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~ 317 (406)
T PRK13393 275 ----FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDK 317 (406)
T ss_pred ----ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 1233444444566677776543321 23334555555555554
No 249
>PRK15029 arginine decarboxylase; Provisional
Probab=99.72 E-value=1.3e-15 Score=160.28 Aligned_cols=225 Identities=20% Similarity=0.170 Sum_probs=162.9
Q ss_pred HHHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHH-HHHh------hcCCCCCCCCcChhHHHHHHHHHHHH
Q psy10210 116 EILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTE-VFGL------TSYTNPLHPDIFPGVCKMEAEVIKMC 184 (435)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~-~~~~------~~~~~~~~~~~~~~~~~~e~~~~~~l 184 (435)
.+++.+.++.+.+...|+-+...++... -.| .+.+..-+ .+.. ....+.+++ .....+..+..
T Consensus 141 pl~~aL~~y~~~~~~~fH~PGHk~G~~~~~~~~~~~~~~f~G~~~~~~Dlt~ev~glD~L~~p------~G~I~eAq~~a 214 (755)
T PRK15029 141 PLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDH------TGAFGESEKYA 214 (755)
T ss_pred HHHHHHHHHHcCCCceeeCCCCCCCCCCCCCchhHHHHHHhccchhhccccccccCCCCCCCC------CcHHHHHHHHH
Confidence 4788899998888777765554433321 122 23333211 1111 011122222 24566777889
Q ss_pred HHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----cc
Q psy10210 185 ARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YT 259 (435)
Q Consensus 185 a~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~ 259 (435)
|+.||++. .-++++|+|.+|..++.+++.+++. |+++..+|-++..++...|+.+++++.. +. +.
T Consensus 215 A~~fgA~~--t~FlvNGST~gn~a~i~a~~~~gd~--------Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi~~~ 284 (755)
T PRK15029 215 ARVFGADR--SWSVVVGTSGSNRTIMQACMTDNDV--------VVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGP 284 (755)
T ss_pred HHHhCCCc--EEEEeCChhHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeEEEecccccccCCccC
Confidence 99999875 5799999999999999999988887 9999999999999999999999999754 21 23
Q ss_pred cc-----HHHHHHHhhcC--ce--------EEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 260 VD-----LAALQSAITGN--TV--------MLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 260 ~d-----~~~l~~~i~~~--~~--------~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
++ ++.+++++.++ .+ ++++++|++ .|.+.++++|+++|++++++|+||||||+... |.. .+
T Consensus 285 i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~-F~~--~~ 360 (755)
T PRK15029 285 IYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYAR-FNP--IY 360 (755)
T ss_pred CCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccc-cCc--cc
Confidence 44 88999988642 33 899999988 89999999999999999999999999998653 211 11
Q ss_pred CCCCCCC-----CCCCcc-EEEecCCCCCCccCCcEEEEEeCC
Q psy10210 325 PLPPFDF-----SLPGVT-SISVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 325 ~~~~~d~-----~~~gvd-~~~~s~hK~~~~p~g~g~il~~~~ 361 (435)
+. ...+ ...|+| +++.|+||.+.+...++++.++++
T Consensus 361 p~-~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 361 AD-HYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred cc-cccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 10 0112 125788 888899999888888899988765
No 250
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=3e-16 Score=158.00 Aligned_cols=155 Identities=19% Similarity=0.185 Sum_probs=121.8
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g~~v~~vp~ 254 (435)
++.+.++++.|.+ ..+++++|+.|+.+++.++..+++. |+++...|.+.... +...|++++.++
T Consensus 73 ~Le~~lA~l~g~~---~av~~sSG~aAi~~al~all~~Gd~--------Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 73 VVEQRIAALEGGV---AALLLASGQAAETFAILNLAGAGDH--------IVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred HHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHHhCCCCE--------EEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 4455777888765 3588888999999999998877776 99999888875543 344688887775
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+. .|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|++++||++++.... ..++ ..
T Consensus 141 d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~---------~~pl---~~ 205 (436)
T PRK07812 141 DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL---------IRPL---EH 205 (436)
T ss_pred CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---------CCch---hc
Confidence 22 389999999999999999999999999999999999999999999999999864322 1122 45
Q ss_pred CccEEEecCCCCCCccCC--cEEEEEeCC
Q psy10210 335 GVTSISVDTHKYGFTPKG--SSVVLYRDL 361 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g--~g~il~~~~ 361 (435)
|+|+++.|+||+++ +.| +|.+++.+.
T Consensus 206 GaDivv~S~tK~lg-g~G~~i~G~vv~~~ 233 (436)
T PRK07812 206 GADIVVHSATKYLG-GHGTAIAGVIVDGG 233 (436)
T ss_pred CCCEEEEecccccC-CCCCeEEEEEEcCC
Confidence 89999999999964 444 455555443
No 251
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.7e-16 Score=157.32 Aligned_cols=205 Identities=14% Similarity=0.035 Sum_probs=140.7
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHH----HHHHcCCEEEEEecCC
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDK----AANYFGMKVKHIRLTS 256 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~----~~~~~g~~v~~vp~~~ 256 (435)
++.++.+-+.+ ..+++++|++|+..++.++.++||. |+++++.|.++.. .++.+|+++..++.+
T Consensus 70 e~~la~le~~~---~~v~~sSG~aAi~~~l~all~~GD~--------Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~- 137 (395)
T PRK05967 70 CKAIDALEGSA---GTILVPSGLAAVTVPFLGFLSPGDH--------ALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE- 137 (395)
T ss_pred HHHHHHHhCCC---CEEEECcHHHHHHHHHHHhcCCCCE--------EEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-
Confidence 33444554432 3466666899999999999888887 9999999999764 457789999888643
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
+.+.++++++++|++|++++|+||++.+.|+++|+++|+++|+++++|++|+..+. ......|+
T Consensus 138 ----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~------------~~pl~~Ga 201 (395)
T PRK05967 138 ----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY------------FRPLDFGV 201 (395)
T ss_pred ----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee------------cChhHcCC
Confidence 35779999999999999999999999999999999999999999999999975432 22333599
Q ss_pred cEEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
|++..|..||..|-.+ .|+ ++.+++..+........ .|. - .....+|..+ -|.+.+.-|+++
T Consensus 202 Divv~S~tKy~~Gh~d~~~G~-v~~~~~~~~~l~~~~~~-~G~----------~--~~p~da~l~~--rgl~Tl~lR~~~ 265 (395)
T PRK05967 202 DISIHAATKYPSGHSDILLGT-VSANEKCWPQLLEAHGT-LGL----------C--AGPDDTYQIL--RGLRTMGIRLEH 265 (395)
T ss_pred CEEEEecccccCCCCCeeEEE-EEcCHHHHHHHHHHHHH-cCC----------C--CCHHHHHHHH--cCcccHHHHHHH
Confidence 9999999999544322 355 44444432221111111 111 1 1112566444 445566666666
Q ss_pred HHHHHHHH---HHhcCCc
Q psy10210 415 YHFNYKSC---LQNLSDL 429 (435)
Q Consensus 415 ~~~~~~~~---~~~l~~l 429 (435)
..+.+... +++-+.+
T Consensus 266 ~~~na~~lA~~L~~hp~v 283 (395)
T PRK05967 266 HRKSALEIARWLEGRPDV 283 (395)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 66665444 4444555
No 252
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.71 E-value=1.2e-15 Score=153.23 Aligned_cols=250 Identities=18% Similarity=0.067 Sum_probs=162.1
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+....+.. ...+...++.+.++++.+. +.++++++|+||+..|++.++......+|.
T Consensus 57 ~~p~v~~ai~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~---~~~~~~~SGseA~e~Alk~a~~~~~~~~g~ 127 (396)
T PRK04073 57 RHPKIIQALKDQADKVTLTSRA------FHSDQLGPWYEKVAKLTGK---DMVLPMNTGAEAVETAIKAARRWAYDVKGV 127 (396)
T ss_pred CCHHHHHHHHHHHhhccccccc------cCCHHHHHHHHHHHhcCCC---CeEEEcCChHHHHHHHHHHHHHHhhhccCC
Confidence 4899999999998874332211 1223445566777777653 378999999999999999998763322232
Q ss_pred --CCCeEEEeCCCchhHH-HHHHHcCCE------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210 224 --SLPEIVLPTTAHPAFD-KAANYFGMK------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM 288 (435)
Q Consensus 224 --~~~~viv~~~~~~~~~-~~~~~~g~~------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~ 288 (435)
.+.+|+..+.+|++.. .+....+.. +..+|. .|++++++++++++++|+++.++||+|.+
T Consensus 128 ~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~viiep~~~~~G~~ 202 (396)
T PRK04073 128 EPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAITPNTAAFLVEPIQGEAGIN 202 (396)
T ss_pred CCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcccCeEEEEEcCccCCCCCc
Confidence 2456888877777643 333332211 222332 27899999998899999999999999998
Q ss_pred cC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCcc
Q psy10210 289 DD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKY 363 (435)
Q Consensus 289 ~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~ 363 (435)
-+ +++|.++|++||+++|+||+|.++... |.. ..++......|+++++ |...++ ..+|+++.+ +++
T Consensus 203 ~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~-----g~~-~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~~~~-~~i 273 (396)
T PRK04073 203 IPPEGFLKAARELCKEENVLFIADEIQTGLGRT-----GKL-FACDWDNVTPDMYILG--KALGGGVFPISCVAAN-RDI 273 (396)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC-----cHH-HHhhhcCCCCCEEEec--ccccCCCCcceEEEEc-HHH
Confidence 33 899999999999999999999976331 110 0112222235777764 874443 567886554 454
Q ss_pred ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+.. .....+.+ ..+ +....+++.++|+.+..+++.++.++..+.+.+.++++
T Consensus 274 ~~~~---~~~~~~~t-----~~~--~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 274 LGVF---TPGSHGST-----FGG--NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred Hhhh---cCCCCCCC-----CCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 4331 11112222 222 22233566677877767788888888888888877765
No 253
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=7.5e-16 Score=154.36 Aligned_cols=150 Identities=15% Similarity=0.136 Sum_probs=122.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----HHHcC
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----ANYFG 246 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----~~~~g 246 (435)
|.+..+|+ .++++.|.. ..+.+++|+.|+.+++.++..+||. ||++.+.|.+.... +..+|
T Consensus 61 Ptv~~lE~----~la~leg~~---~av~~~SG~aAi~~al~all~~GD~--------VI~~~~~Y~~T~~~~~~~l~~~G 125 (432)
T PRK06702 61 PTLAAFEQ----KLAELEGGV---GAVATASGQAAIMLAVLNICSSGDH--------LLCSSTVYGGTFNLFGVSLRKLG 125 (432)
T ss_pred cHHHHHHH----HHHHHhCCC---cEEEECCHHHHHHHHHHHhcCCCCE--------EEECCCchHHHHHHHHHHHHHCC
Confidence 44555444 566667664 4688999999999999998877776 99999999875555 67789
Q ss_pred CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
+++..+.. .+|+++++++|+++|++|++++|+||++.+.|+++|.++|+++|+++++|++++...+
T Consensus 126 i~v~~vd~----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~---------- 191 (432)
T PRK06702 126 IDVTFFNP----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL---------- 191 (432)
T ss_pred CEEEEECC----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh----------
Confidence 99988853 3689999999999999999999999999999999999999999999999999752211
Q ss_pred CCCCCCCCCccEEEecCCCCCCccC
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPK 351 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~ 351 (435)
......|+|+++.|..||..|..
T Consensus 192 --~~pl~~GADIvv~S~TKy~~Ghs 214 (432)
T PRK06702 192 --CQAFEHGANIIVHSTTKYIDGHA 214 (432)
T ss_pred --CChhhcCCCEEEEccccccCCCc
Confidence 22335589999999999976653
No 254
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=4.1e-16 Score=157.03 Aligned_cols=154 Identities=19% Similarity=0.184 Sum_probs=119.2
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~ 254 (435)
++.+.++++.|.. ..+++++|++|+.+++.++.++++. |+++.+.|.+....+.. .|+++..++.
T Consensus 62 ~Le~~lA~l~g~~---~~l~~ssG~~Ai~~al~al~~~Gd~--------Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 62 VLEQRVAALEGGV---GALAVASGMAAITYAIQTIAEAGDN--------IVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred HHHHHHHHHhCCC---ceeEehhHHHHHHHHHHHHhCCCCE--------EEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 3455677777753 4578889999999999999877776 99999998865544432 4666666653
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
.|++++++++++++++|++++|+||+|.+.++++|.++|++||+++++|++++.... ..++ ..
T Consensus 131 -----~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~---------~~p~---~~ 193 (425)
T PRK06084 131 -----DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVL---------CRPF---EH 193 (425)
T ss_pred -----CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc---------CChh---hc
Confidence 489999999999999999999999999999999999999999999999999974322 1122 34
Q ss_pred CccEEEecCCCCCCccC-CcEEEEEeC
Q psy10210 335 GVTSISVDTHKYGFTPK-GSSVVLYRD 360 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~-g~g~il~~~ 360 (435)
|+|+++.|++||+.++. ..|.+++.+
T Consensus 194 gaDivv~S~tK~l~G~g~~~gG~v~~~ 220 (425)
T PRK06084 194 GADIVVHSLTKYIGGHGTSIGGIVVDS 220 (425)
T ss_pred CCCEEEECchhcccccccceeEEEEeC
Confidence 79999999999976552 234445543
No 255
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.71 E-value=2.1e-15 Score=152.03 Aligned_cols=196 Identities=18% Similarity=0.233 Sum_probs=138.7
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcC-hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIF-PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+++.+++.+++..+. | +.++.. .........+++.+++++|++. .+++++|+.|+.+++.+ ..++++
T Consensus 94 ~~~vieAv~~~~~~y~--~-l~~~l~~g~~g~r~~~le~~lA~l~gae~---alvv~sg~aAi~l~l~~-l~~Gde---- 162 (454)
T TIGR00474 94 AEEAIEAVTDAARGYS--N-LEYDLETGKRGSRYSHVEGLLCELTGAED---ALVVNNNAAAVLLALNT-LAKGKE---- 162 (454)
T ss_pred CHHHHHHHHHHHhccc--c-hhccccccccchHHHHHHHHHHHHhCCCc---EEEECCHHHHHHHHHHH-hCCcCE----
Confidence 5778888888877542 2 222211 1122335678889999999864 35677889999988855 344544
Q ss_pred CCCeEEEeCCCchh------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCc--cc--ccCHHH
Q psy10210 224 SLPEIVLPTTAHPA------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPY--GT--MDDIGA 293 (435)
Q Consensus 224 ~~~~viv~~~~~~~------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt--G~--~~~i~~ 293 (435)
||+++..|.. +...++..|++++.++.+ ...|+++++++++++|++|++++++|++ |. +.|+++
T Consensus 163 ----VIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~ 236 (454)
T TIGR00474 163 ----VIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAE 236 (454)
T ss_pred ----EEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHH
Confidence 9999877642 344667789999998764 2358999999999999999999999985 64 679999
Q ss_pred HHHHHHHcCCcEEEeccccchhhhcccccCCCCCC--CCCCCCCccEEEecCCCCCCccCCcEEEEEeC
Q psy10210 294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP--FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD 360 (435)
Q Consensus 294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~--~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~ 360 (435)
|+++|++||+++++|.+.|.+ .+. ...|.+..| .+....|+|++++|+|||++||. .|+++.++
T Consensus 237 I~~la~~~g~~vivD~~sG~l-~~~-~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~ 302 (454)
T TIGR00474 237 LVALGREHGLPVMEDLGSGSL-VDL-SRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKK 302 (454)
T ss_pred HHHHHHHcCCeEEEECCCccc-ccc-hhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECH
Confidence 999999999999999864432 110 001222222 24556799999999999977775 67766554
No 256
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=1.9e-15 Score=151.16 Aligned_cols=251 Identities=16% Similarity=0.059 Sum_probs=167.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.++..+....+. ....+.+.++.+.+++..+. +.++++++|+||+..|++.++..... ++.
T Consensus 53 ~~p~v~~a~~~q~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~f~~SGseA~e~Aik~ar~~~~~-~~~ 122 (395)
T PRK03715 53 CNPGMVEALAAQAEKLINPSP------AFYNEPMAKLAGLLTQHSCF---DKVFFANSGAEANEGAIKLARKWGRK-HKN 122 (395)
T ss_pred CCHHHHHHHHHHHHhcccccc------cccCHHHHHHHHHHhhccCC---CEEEEeCCcHHHHHHHHHHHHHHhhc-cCC
Confidence 389999999998876432221 12346667777777766432 37999999999999999999866432 222
Q ss_pred CCCeEEEeCCCchhH-HHHHHHcCCEEE---EEecCCCc----cccHHHHHHHhhcCceEEEEeCCCCCcccccC----H
Q psy10210 224 SLPEIVLPTTAHPAF-DKAANYFGMKVK---HIRLTSSY----TVDLAALQSAITGNTVMLVGSMPNFPYGTMDD----I 291 (435)
Q Consensus 224 ~~~~viv~~~~~~~~-~~~~~~~g~~v~---~vp~~~~~----~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~----i 291 (435)
.+++|+..+..|++. ..++...|.... ..|....+ ..|++++++.+.+++++|+++..++..|.+.+ +
T Consensus 123 ~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~~~~~l 202 (395)
T PRK03715 123 GAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPATREFM 202 (395)
T ss_pred CCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccCCHHHH
Confidence 345688888777764 344443342211 11111111 24789999999888999999988888888754 9
Q ss_pred HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210 292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF 369 (435)
Q Consensus 292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~ 369 (435)
++|.++|++||+++|+||+++||-. .|. .+.+... ..|+++++ |.+.++.++|.++.++ ++..
T Consensus 203 ~~l~~l~~~~~~llI~DEv~tG~GR-----tG~---~~a~~~~gv~PDi~t~g--K~lg~G~p~~av~~~~-~i~~---- 267 (395)
T PRK03715 203 QQLRALTKQHGLLLIVDEVQTGCGR-----TGT---LFAYELSGIEPDIMTLG--KGIGGGVPLAALLAKA-EVAV---- 267 (395)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCC-----Ccc---hhhHhhcCCCCceeeeh--hhhhCCcceEEEEEcc-cccc----
Confidence 9999999999999999999997522 232 2222222 24887775 7655546678876655 4421
Q ss_pred ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.+...+++| .+. ....+++.++++.+.++++.++++++.+.+++.++++
T Consensus 268 ~~~~~~~~T~-----~g~--pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 268 FEAGDQGGTY-----NGN--PLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLEL 317 (395)
T ss_pred ccCCCcCCCC-----CCC--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 1222233332 232 3345788899999988889999999999988887765
No 257
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.70 E-value=6.2e-16 Score=151.42 Aligned_cols=157 Identities=12% Similarity=-0.010 Sum_probs=113.8
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCc
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~ 258 (435)
++++.+++.++. +++++|+|+++++.+++. ..+++. |++++|+|+.+...++..|++++.+|++
T Consensus 53 ~Lr~~ia~~~~~---~~I~it~Gs~~al~~~~~--~~~gd~--------v~v~~P~y~~~~~~~~~~g~~~~~v~~~--- 116 (330)
T PRK05664 53 GLEAAARAYYGA---PQLLPVAGSQAAIQALPR--LRAPGR--------VGVLSPCYAEHAHAWRRAGHQVRELDEA--- 116 (330)
T ss_pred HHHHHHHHHhCC---CCEEECcCHHHHHHHHHH--ccCCCE--------EEEcCCChHHHHHHHHHcCCeEEEechh---
Confidence 344555555543 389999999999998864 245554 9999999999999999999999999863
Q ss_pred cccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 259 TVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 259 ~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
++++++ ++++++++++||||||.+ +++++|+++|+++++++++||+|..+.. .. ....+....
T Consensus 117 -----~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~------~~--s~~~~~~~~ 182 (330)
T PRK05664 117 -----EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP------QH--SLAACAHRP 182 (330)
T ss_pred -----hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC------cc--cccccccCC
Confidence 344555 367889999999999999 5678888888999999999999976531 00 111211111
Q ss_pred ccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 336 VTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 336 vd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
-.+++.|++|..+ +...+|+++. ++++.+.
T Consensus 183 ~vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~ 213 (330)
T PRK05664 183 GLIVLRSFGKFFGLAGARLGFVLA-EPALLRA 213 (330)
T ss_pred CEEEEeeccccccCCCcceEEEEe-CHHHHHH
Confidence 2366778999853 4577899665 4555543
No 258
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.70 E-value=2e-15 Score=151.52 Aligned_cols=249 Identities=16% Similarity=0.049 Sum_probs=163.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+....... ...+...++.+.++++++. +.++++++|+||+..|++.++.....+.+.
T Consensus 52 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~Alk~ar~~~~~~~~~ 122 (397)
T TIGR03246 52 AHPELVKALIEQADKLWHIGNG------YTNEPVLRLAKKLVDATFA---DKVFFCNSGAEANEAALKLARRYALDKHGA 122 (397)
T ss_pred CCHHHHHHHHHHHHhcccccCc------cCCHHHHHHHHHHHhhCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCC
Confidence 4899999999998863221110 1134456677778887753 378999999999999999998764332233
Q ss_pred CCCeEEEeCCCchhHHHH-HHHcCC------------EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210 224 SLPEIVLPTTAHPAFDKA-ANYFGM------------KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-- 288 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~-~~~~g~------------~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-- 288 (435)
.+++|+..+..|++.... ....+. .+..+|. .|++++++++.+++++|+++.++++.|.+
T Consensus 123 ~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aavi~Epi~~~~G~~~~ 197 (397)
T TIGR03246 123 DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALISDKTCAVIVEPIQGEGGVVPA 197 (397)
T ss_pred CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhccCeEEEEEecccCCCCCcCC
Confidence 456788888777775333 333232 1222322 37899999998889999999877777754
Q ss_pred --cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 289 --DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 289 --~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
+++++|.++|++||+++|+||+|.|+.. .|. .+.....| +|++++ .|.+.+...+|+++.++ ++.
T Consensus 198 ~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr-----~G~---~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~-~i~ 266 (397)
T TIGR03246 198 DPAFLKGLRELCDRHNALLIFDEVQTGVGR-----TGE---LYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTT-EIA 266 (397)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhcCCc-----ccc---chhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcH-HHH
Confidence 6699999999999999999999987732 121 11212222 477765 48754446678866654 443
Q ss_pred cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+.. .....+.+| .+ +....+++.+++..+..+++.+++++..+++.+.++++.
T Consensus 267 ~~~---~~~~~~~t~-----~~--~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 267 AHL---KVGTHGTTY-----GG--NPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKIN 319 (397)
T ss_pred Hhc---cCCCcCCCC-----CC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 321 111122222 22 222346777888888777888888888888888777653
No 259
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.70 E-value=1.8e-14 Score=138.16 Aligned_cols=326 Identities=17% Similarity=0.178 Sum_probs=213.5
Q ss_pred hhhchhhHHHHHHHHHHHH----HHHHh-hhhhcCCCC-ccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCccccccc
Q psy10210 69 ARKIPAVRKKLEEETGKVA----KLFQD-DIKQNNAGL-EYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVY 142 (435)
Q Consensus 69 ~~~lp~~~~~i~~~~~~~~----~~~~~-~~~~~~~~~-~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (435)
-+..|.. ....++|+.+. +++.. .++++.... .-...+|. ++++.++++++++...++. .+ ..+.+.+.|
T Consensus 10 rh~~P~~-~d~~~ML~~iG~~Sld~L~~~~IP~~Ir~~~~~~~~~~~-~~sE~e~l~~l~~ia~kN~-~~-~sfiG~GyY 85 (450)
T COG0403 10 RHIGPSS-ADQQEMLAAIGVSSLDELFSQDIPPSIRKKLDTLLPLPK-PLSEYEALAELKEIASKNK-VF-TSFIGAGYY 85 (450)
T ss_pred cCCCCCh-HHHHHHHHHcCCCCHHHHhhccCCHHHHhcccccCCCCC-CCCHHHHHHHHHHHHhcCc-hh-hhhccCccc
Confidence 3456766 66777777654 44544 444432211 00112333 3799999999999988765 22 223333333
Q ss_pred C-ChHhHHH-HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210 143 Y-YQQDLVD-LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE 220 (435)
Q Consensus 143 ~-g~~~l~~-~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~ 220 (435)
. ..|.+.. .+.+.-+-+....|++|+.+++..+...+...++++++|.+-. +-.+-.++|.+-+.++.+.+..+.+
T Consensus 86 ~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VA-NASm~DeaTAaAEAm~ma~r~~k~k- 163 (450)
T COG0403 86 DTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVA-NASMLDEATAAAEAMLMAKRVTKKK- 163 (450)
T ss_pred CCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcc-cchhhhhHHHHHHHHHHHHHhhcCc-
Confidence 2 2455544 5543322222335999999999999999999999999999875 7788899998888888877654422
Q ss_pred cCCCCCeEEEeCCCchhHHHHHHHc----CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcc-cccCHHHHH
Q psy10210 221 KGISLPEIVLPTTAHPAFDKAANYF----GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYG-TMDDIGAIA 295 (435)
Q Consensus 221 ~g~~~~~viv~~~~~~~~~~~~~~~----g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG-~~~~i~~i~ 295 (435)
+.+++++...|+......+.. |.+++.++.+ |+++++++.+.++.++++.+|++ .| ...++++|.
T Consensus 164 ----~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d~~~l~ 233 (450)
T COG0403 164 ----RNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESADDGDVFGVLVQYPNT-FGIVEEDLRALI 233 (450)
T ss_pred ----CceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhccccCeEEEEEecCCC-CCccchhHHHHH
Confidence 456999999999987776653 6777777754 78888888335899999999997 77 558899999
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCCcccccccccc
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDLKYKHCQYFVT 371 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~~~~~~~~~~~ 371 (435)
+.++++|.++++=.---.+.+ -.+| ...|+|+.+.+++-+| +|++.+|++.++++-.++ .
T Consensus 234 ~~~h~~~al~~v~aDplaL~L--------L~pP---Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~-----m 297 (450)
T COG0403 234 EAAHSAGALVIVAADPLALGL--------LKPP---GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQ-----M 297 (450)
T ss_pred HHHhhcCCEEEEEechhHhhc--------cCCc---cccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhc-----C
Confidence 999999998876432211111 1122 3458999999999885 333447887777654332 2
Q ss_pred CCCCCCCCCCCccccCCCc-----------------------hHHH--HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 372 SDWPGGNYGSPSVSGSRSG-----------------------GIIA--TCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 372 ~~~~gg~~~~~~~~gsr~~-----------------------~~ia--~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
|...-|. +..-.|.|.. .++. .+-..+.++|.+|+++..+++.+.+..+.++|
T Consensus 298 PGRlVG~--S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L 375 (450)
T COG0403 298 PGRLVGV--SVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGL 375 (450)
T ss_pred CCceeee--eecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 3332221 1111122111 1111 12223567899999999999999888888877
Q ss_pred CC
Q psy10210 427 SD 428 (435)
Q Consensus 427 ~~ 428 (435)
.+
T Consensus 376 ~~ 377 (450)
T COG0403 376 KE 377 (450)
T ss_pred hh
Confidence 73
No 260
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.70 E-value=2.3e-15 Score=149.72 Aligned_cols=198 Identities=14% Similarity=0.083 Sum_probs=132.6
Q ss_pred ccCChHhHHHHHHHHHHhhcC------CCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210 141 VYYYQQDLVDLLTEVFGLTSY------TNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR 214 (435)
Q Consensus 141 ~~~g~~~l~~~i~~~~~~~~~------~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~ 214 (435)
.+.-+|++.+++.+.+..+.. ..........+..+...++++.+++++|.+. .+++++| +.++...+..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG-~~a~~~~~~~~~ 92 (370)
T PRK05937 16 GFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSG-YMANLGLCAHLS 92 (370)
T ss_pred CCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECCh-HHHHHHHHHHhC
Confidence 334478889988888877631 2222333344567888999999999999853 4555555 566654444332
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh------cCceEEEEeCCCCCcccc
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT------GNTVMLVGSMPNFPYGTM 288 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~------~~~~~v~~~~p~nptG~~ 288 (435)
.++ +.|++....|.+...+++......+.++ ..|+++++++++ +++.+|++++++|++|.+
T Consensus 93 ~~~--------d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i 159 (370)
T PRK05937 93 SVT--------DYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTL 159 (370)
T ss_pred CCC--------CEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCc
Confidence 233 3477778899998888877643333333 368999999886 346678889999999999
Q ss_pred cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeC
Q psy10210 289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRD 360 (435)
Q Consensus 289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~ 360 (435)
.|+++|.++|+++|+++|+|++|+.+.++.. +.+. .........+.+..+++|. +||.|+++ ++.+
T Consensus 160 ~pl~eI~~l~~~~~~~livDea~~~G~~g~~---g~g~-~~~~~~~~~~~~~~tlsK~-~g~~G~~v-l~~~ 225 (370)
T PRK05937 160 APLEQIIALSKKYHAHLIVDEAHAMGIFGDD---GKGF-CHSLGYENFYAVLVTYSKA-LGSMGAAL-LSSS 225 (370)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCC---CCch-HHhhCCCCCcEEEEechhh-hhcCceEE-EcCH
Confidence 9999999999999999999999986544211 1100 0001111223456677798 68888776 4443
No 261
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.69 E-value=2.6e-15 Score=150.95 Aligned_cols=255 Identities=16% Similarity=0.058 Sum_probs=161.3
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++.+++.+.+.......+. + ..+...++.+.++++++. +.++++++|++|+..+++.++..+..++|.
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~----~--~~~~~~~~~~~l~~~~~~---~~~~~~~SGs~A~e~al~~~~~~~~~~~~~ 118 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRA----F--YNDVLGLAEKYITDLFGY---DKVLPMNSGAEAGETALKFARKWGYEVKGI 118 (400)
T ss_pred CCHHHHHHHHHHHHhccccccc----c--cCHHHHHHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhccCC
Confidence 4899999999988764332211 1 123556777777887765 268899999999999999988665444454
Q ss_pred --CCCeEEEeCCCchhHHHH-HHHcCCEEE---EEecCCC----ccccHHHHHHHhh-cCceEEEEeCCCCCcccccC--
Q psy10210 224 --SLPEIVLPTTAHPAFDKA-ANYFGMKVK---HIRLTSS----YTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDD-- 290 (435)
Q Consensus 224 --~~~~viv~~~~~~~~~~~-~~~~g~~v~---~vp~~~~----~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~-- 290 (435)
.+..|++.+.+|++.... ....+.... ..|..++ ...|++++++++. +++++|+++.++||+|.+-+
T Consensus 119 ~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~ 198 (400)
T PTZ00125 119 PENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDD 198 (400)
T ss_pred CCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCH
Confidence 345688888877774333 332221110 0011000 1138999999996 67999999999999999855
Q ss_pred --HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccC-CcEEEEEeCCcccccc
Q psy10210 291 --IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQ 367 (435)
Q Consensus 291 --i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~ 367 (435)
+++|.++|++||+++|+|++|+++... |.. ...+......|+++++ |.+.++. ++|+++.++ ++.+..
T Consensus 199 ~~l~~l~~l~~~~~~lli~Dev~~g~g~~-----G~~-~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~-~~~~~~ 269 (400)
T PTZ00125 199 GYLKQVYELCKKYNVLLIVDEIQTGLGRT-----GKL-LAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND-DVMLVI 269 (400)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcc-----chh-hHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH-HHHhhc
Confidence 999999999999999999999875321 110 0111111124777765 8865553 788866655 443321
Q ss_pred ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 368 YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 368 ~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.....+.+ ..+ +....+++.++++.+..+++.++.+++.+.+.+.++++
T Consensus 270 ---~~~~~~~t-----~~~--~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l 318 (400)
T PTZ00125 270 ---KPGEHGST-----YGG--NPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKEL 318 (400)
T ss_pred ---cCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 11111111 112 22233456667777766677888888877777776654
No 262
>PRK07049 methionine gamma-lyase; Validated
Probab=99.69 E-value=1.3e-15 Score=153.57 Aligned_cols=209 Identities=16% Similarity=0.105 Sum_probs=142.7
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHH----HHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAA----NYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~----~~~g~~v~~vp~ 254 (435)
.+.+.++++.|.+ ++++++||++|+.+++.++.++++. |++++|.|..+...+ +..|++++.++.
T Consensus 87 ~Le~~lA~leg~~---~~iv~~sG~~Ai~~~l~al~~~Gd~--------Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 87 IVEDRLAVYEGAE---SAALFSSGMSAIATTLLAFVRPGDV--------ILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred HHHHHHHHHhCCC---cEEEEccHHHHHHHHHHHHhCCCCE--------EEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 3445677777643 5788899999999999999988887 999999999986653 567988777762
Q ss_pred CCCccccHHHHHHHhh-----cCceEEEEeCCCCCcccccCHHHHHHHHHH------cCCcEEEeccccchhhhcccccC
Q psy10210 255 TSSYTVDLAALQSAIT-----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK------YGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~-----~~~~~v~~~~p~nptG~~~~i~~i~~la~~------~~~~livD~~~~~~~~~~~~~~g 323 (435)
..|++++++++. +++++|++++|+||||.+-++++|.+++++ +++++++|++|.++...
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~------ 225 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQ------ 225 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccC------
Confidence 146777776664 479999999999999999999999999988 89999999998654321
Q ss_pred CCCCCCCCCCCCccEEEecCCCCCCccC--CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH
Q psy10210 324 YPLPPFDFSLPGVTSISVDTHKYGFTPK--GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM 401 (435)
Q Consensus 324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~--g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~ 401 (435)
.++ ..|+|+++.|++|+..|.. .+|++ +.++++.+........+ |+ ......+|++++
T Consensus 226 ---~pl---~~g~divv~S~SK~~gG~~glr~G~v-v~~~~l~~~l~~~~~~~-g~------------~ls~~~a~l~~r 285 (427)
T PRK07049 226 ---KPL---EHGADLSVYSLTKYVGGHSDLVAGAV-LGRKALIRQVRALRSAI-GT------------QLDPHSCWMLGR 285 (427)
T ss_pred ---Ccc---ccCCCEEEEcCceeecCCCCcEEEEE-ECCHHHHHHHHHHHHhc-CC------------CCCHHHHHHHHc
Confidence 123 2368999999999965433 35774 45555544322222222 11 011135676666
Q ss_pred HhcHHHHHHHHHHHHHH---HHHHHHhcCCcc
Q psy10210 402 YFGFEAQVWICVRYHFN---YKSCLQNLSDLW 430 (435)
Q Consensus 402 ~~g~~g~~~~~~~~~~~---~~~~~~~l~~l~ 430 (435)
.+. .+..++++..+. +.+.+++.+++.
T Consensus 286 ~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~ 315 (427)
T PRK07049 286 SLE--TLVLRMERANRNARAVAEFLRDHPKVE 315 (427)
T ss_pred CCC--hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 653 344455544444 444455555553
No 263
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.69 E-value=1.1e-15 Score=150.19 Aligned_cols=160 Identities=14% Similarity=0.082 Sum_probs=114.5
Q ss_pred HHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC
Q psy10210 178 AEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS 257 (435)
Q Consensus 178 ~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~ 257 (435)
.++++.+++.+|.++.+++++|+|+++++.++.. +.+++ . |++++|+|+.+...++..|++++.+|.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~~~~g-~--------v~v~~P~y~~y~~~~~~~g~~~~~v~~~~- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-LLPRG-R--------VGIAPLAYSEYAPAFARHGHRVVPLDEAA- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-hcCCC-e--------EEEcCCCcHHHHHHHHHCCCEEEeecccc-
Confidence 4677788888888754599999999999986654 33332 2 88999999999999999999999888653
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCccccc---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMD---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP 334 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~ 334 (435)
+. +.+.++++++++||||||.+- .++++++.|++++.++++||+|..|... .. ..... ...
T Consensus 125 -----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s--~~~~~-~~~ 188 (339)
T PRK06959 125 -----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA----AS--LAAHT-DRP 188 (339)
T ss_pred -----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc----cc--chhcc-CCC
Confidence 22 223457899999999999994 4555666677889999999999987431 00 00111 112
Q ss_pred CccEEEecCCCCCC-ccCCcEEEEEeCCccccc
Q psy10210 335 GVTSISVDTHKYGF-TPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 335 gvd~~~~s~hK~~~-~p~g~g~il~~~~~~~~~ 366 (435)
+ .++..|+.|..+ +...+|+++. ++++.+.
T Consensus 189 ~-vi~l~SfSK~~gl~GlRiGy~v~-~~~li~~ 219 (339)
T PRK06959 189 G-LVVLRSVGKFFGLAGVRAGFVLA-APALLAA 219 (339)
T ss_pred C-EEEEecChhhcCCcchheEEEec-CHHHHHH
Confidence 2 366778999743 5577899664 5566544
No 264
>KOG0634|consensus
Probab=99.69 E-value=6.2e-16 Score=147.81 Aligned_cols=220 Identities=15% Similarity=0.153 Sum_probs=151.9
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG--- 271 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--- 271 (435)
++++|+|.|.++..+++.++++++. |++...+|++.....+..|++++.|++|++| ++++.|++.+..
T Consensus 126 diiit~G~t~~l~~~l~~~~N~gd~--------vlie~~ty~~AL~s~~a~gv~~ipv~md~~G-i~pE~l~~il~~w~~ 196 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRTLINRGDH--------VLIEEYTYPSALQSMEALGVKIIPVKMDQDG-IDPESLEEILSNWKP 196 (472)
T ss_pred eEEEecCCchHHHHHHHHhhcCCCc--------eEEecccchHHHHhccccCceEEeccccCCC-CCHHHHHHHHhcCCc
Confidence 7999999999999999999999998 9999999999999999999999888888766 899999998853
Q ss_pred ------Cc-eEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhh-cccccCCCCCCC-----------
Q psy10210 272 ------NT-VMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAP-FMSAAGYPLPPF----------- 329 (435)
Q Consensus 272 ------~~-~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~-~~~~~g~~~~~~----------- 329 (435)
++ .+..+..++||||.. +..++|.+||++|++++++|+.|.-+-.. +........+.+
T Consensus 197 ~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~ 276 (472)
T KOG0634|consen 197 GSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVP 276 (472)
T ss_pred ccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcC
Confidence 23 456677899999988 67889999999999999999999643221 000000011111
Q ss_pred ---CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210 330 ---DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406 (435)
Q Consensus 330 ---d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~ 406 (435)
+....|-.+=.-|+.|....+...|+ +..++.++++.... +. .+..+ .++..-...++.++.+|.+
T Consensus 277 sflslDtdGrVIr~dSFSKiiaPGlRlG~-it~~~~~l~ril~~------ae---~~t~~-pSg~sq~iv~a~l~~wgqe 345 (472)
T KOG0634|consen 277 SFLSLDTDGRVIRNDSFSKIIAPGLRLGW-ITGNSLFLKRILDL------AE---VATSG-PSGFSQGIVYAMLKRWGQE 345 (472)
T ss_pred CcccccccccEEeccchhhhhcCcceeEE-eecCHHHHHHHhhh------cc---eeecC-cccccHHHHHHHHHHHHHH
Confidence 11122222223357898533377899 55555444332111 00 11111 3333334678899999999
Q ss_pred HHHHHHHHHHHHHHHHHHh-cCCcccccC
Q psy10210 407 AQVWICVRYHFNYKSCLQN-LSDLWLYLP 434 (435)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~-l~~l~~~~p 434 (435)
||.+++.++...+..+... +..+..|+|
T Consensus 346 G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp 374 (472)
T KOG0634|consen 346 GFLRWIQHLRSSYTERRNALLSALDKYLP 374 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999988776655442 344444444
No 265
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.69 E-value=4.9e-16 Score=153.71 Aligned_cols=195 Identities=12% Similarity=-0.009 Sum_probs=136.2
Q ss_pred CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHH
Q psy10210 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAY 213 (435)
Q Consensus 135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~ 213 (435)
+.+.-++..-++++++++..... .-....+..+.+.++..++++.+++++|.+++.+++++ +|||.++++++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~----~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l 80 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAA----SLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL 80 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCc----cccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc
Confidence 34444455556666666542210 01112356788899999999999999998655567775 66999999999888
Q ss_pred HHHhhhhcCCCCCeEEEeCCCchh-HHHHHHHc--CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccC
Q psy10210 214 RDYAREEKGISLPEIVLPTTAHPA-FDKAANYF--GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDD 290 (435)
Q Consensus 214 ~~~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~--g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~ 290 (435)
... +. +++..-.|.. +.+.+... +.++..++.+.+..++. .+++++++|++++.+|.||.+.|
T Consensus 81 ~~~-~~--------l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lV~~~h~et~tG~~~p 146 (361)
T TIGR01366 81 IEK-KS--------LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QADPGVDVIAWAHNETSTGVAVP 146 (361)
T ss_pred ccc-cc--------cEEecCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccCCCCCEEEEcccCCccceecc
Confidence 521 11 4555555654 44455542 23677777654333333 35678999999999999999999
Q ss_pred HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210 291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKY 363 (435)
Q Consensus 291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~ 363 (435)
+++| ++++|+++++|++++.+ +.++|+.. +|++++++||++++|.|.++++++++.+
T Consensus 147 i~~I---~~~~g~~~iVDavqs~g-----------~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~ 203 (361)
T TIGR01366 147 VRRP---EGSDDALVVIDATSGAG-----------GLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAAL 203 (361)
T ss_pred cccc---cccCCCeEEEEcCcccc-----------CCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHH
Confidence 9887 58899999999998543 34677653 8999999999976667777766666543
No 266
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.69 E-value=2.7e-15 Score=151.68 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=125.5
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS 257 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~ 257 (435)
+++.+++++|.+ .+++++|||+|+.+++.++........++ ++++||+++++|+++..++...|++++.++++ .+
T Consensus 68 fe~~lA~~~g~~---~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~ 144 (438)
T PRK15407 68 FEKKLAEFLGVR---YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPT 144 (438)
T ss_pred HHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCc
Confidence 444556666653 57899999999999999874221111121 24569999999999999999999999999997 67
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
+.+|+++++++++++|++|+++++ +|...++++|.++|++||+++|+|++++-+...-.+..| .+ ..+.
T Consensus 145 ~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G----~~----gd~~ 213 (438)
T PRK15407 145 YNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTG----TF----GDIA 213 (438)
T ss_pred CCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeee----cc----CceE
Confidence 889999999999999999998874 677889999999999999999999999766442111111 11 1123
Q ss_pred EEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210 338 SISVDTHKYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 338 ~~~~s~hK~~~~p~g~g~il~~~~~~~~ 365 (435)
++++...|.+....| |+++++++++.+
T Consensus 214 ~fSf~~~k~~~~geG-G~l~t~d~~l~~ 240 (438)
T PRK15407 214 TLSFYPAHHITMGEG-GAVFTNDPLLKK 240 (438)
T ss_pred EEeCCCCCCccccCc-eEEEECCHHHHH
Confidence 444445565444445 888888887754
No 267
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.68 E-value=2.7e-15 Score=135.11 Aligned_cols=195 Identities=18% Similarity=0.178 Sum_probs=152.0
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTV 260 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~ 260 (435)
.+++++|++ ++-+|.|+.++-+.++.+++.++|. |++...+|++..-+|+..|+++..||-. +++.+
T Consensus 69 dlaeFlg~D---~~R~t~GARe~KfavMhal~~~gd~--------vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i 137 (382)
T COG1103 69 DLAEFLGMD---EVRVTAGAREAKFAVMHALCKEGDW--------VVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKI 137 (382)
T ss_pred HHHHHhCCc---eeeecccchhhHHHHHHHhccCCCE--------EEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEe
Confidence 477888885 6799999999999999999999988 9999999999999999999999999964 67889
Q ss_pred cHHHHHHHhhc-------CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCC
Q psy10210 261 DLAALQSAITG-------NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSL 333 (435)
Q Consensus 261 d~~~l~~~i~~-------~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~ 333 (435)
+++...+.|.+ .+.+.+++++....|.+.|.+.++++|++||++++..++|.-+.. |.....
T Consensus 138 ~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm-----------pvs~ke 206 (382)
T COG1103 138 TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM-----------PVSGKE 206 (382)
T ss_pred cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc-----------cccccc
Confidence 99988877752 478899999999999999999999999999999999999965433 778888
Q ss_pred CCccEEEecCCCCCCccCCcEEEEEeCCcccccccccc-CCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 334 PGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 334 ~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
.|+|+++.|+||.+-+..++|++.++ .++....+..+ ..|.-.. .--+.|+-.|+.+....|++-.
T Consensus 207 ~g~DFiVgSGHKsmAAs~PiGvl~~~-eE~ae~V~r~Sg~~~~~KE--vellGCT~rGapivTlmASfP~ 273 (382)
T COG1103 207 IGADFIVGSGHKSMAASAPIGVLAMS-EEWAEIVLRRSGRAFPKKE--VELLGCTVRGAPIVTLMASFPH 273 (382)
T ss_pred cCCCEEEecCccchhccCCeeEEeeh-hHHHHHHHhhcccccccce--eeeecccccCchHHHHHhcCHH
Confidence 99999999999997666778885555 44443322211 1121110 1123466666666566555433
No 268
>PRK07505 hypothetical protein; Provisional
Probab=99.68 E-value=4.1e-15 Score=149.64 Aligned_cols=250 Identities=14% Similarity=0.100 Sum_probs=153.2
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
+++|++.+++.+.+.++...++..... ....+...++++.++++++. ..+++++|++|+..+++.+.... . .+
T Consensus 60 ~~~p~v~~A~~~~l~~~g~~~~~~~~~-~~~~~~~~~l~~~la~~~~~----~~~~~~sG~~a~~~ai~~~~~~~-~-~~ 132 (402)
T PRK07505 60 DTHPAIIEGAVDALKRTGSLHLSSSRT-RVRSQILKDLEEALSELFGA----SVLTFTSCSAAHLGILPLLASGH-L-TG 132 (402)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCccch-hhhhHHHHHHHHHHHHHhCC----CEEEECChHHHHHHHHHHHHhcc-c-CC
Confidence 449999999999998753222222111 23466788899999999976 34555566889998888764311 0 00
Q ss_pred CCCCeEEEeC-CCchhHHH--HHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 223 ISLPEIVLPT-TAHPAFDK--AANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 223 ~~~~~viv~~-~~~~~~~~--~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
.++.+++.+ ..|.++.. .....+.+++.+|. .|+++++++++++++++++++|+||+|.+.++++|.++|+
T Consensus 133 -~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~~i~~l~~ 206 (402)
T PRK07505 133 -GVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICKTNKTVAYVADGVYSMGGIAPVKELLRLQE 206 (402)
T ss_pred -CCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHhcCCCEEEEEecccccCCcCCHHHHHHHHH
Confidence 122365555 45555432 22223567777775 3889999999878899999999999999999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCC--CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPL--PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG 377 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~--~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg 377 (435)
+||+++|+||+|+...+ ...|.+. ..+....+...+++.++.|.. ++.| |+++..++++.+........|
T Consensus 207 ~~~~~li~DEa~~~~~~---g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~-~~~G-g~~~~~~~~~~~~~~~~~~~~--- 278 (402)
T PRK07505 207 KYGLFLYIDDAHGLSIY---GKNGEGYVRSELDYRLNERTIIAASLGKAF-GASG-GVIMLGDAEQIELILRYAGPL--- 278 (402)
T ss_pred HcCCEEEEECcccccCc---CCCCCchHHHHcCCCCCCCeEEEEechhhh-hccC-eEEEeCCHHHHHHHHHhCCCc---
Confidence 99999999999853221 1111110 011111233456677888974 4334 676656665544321111221
Q ss_pred CCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q psy10210 378 NYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFN 418 (435)
Q Consensus 378 ~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~ 418 (435)
+..++.+...++++.+++..+..+.+.+..+++.+.
T Consensus 279 -----t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~ 314 (402)
T PRK07505 279 -----AFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNN 314 (402)
T ss_pred -----eeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 223344444556677777766555554444444333
No 269
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.68 E-value=3.8e-15 Score=150.31 Aligned_cols=267 Identities=15% Similarity=0.070 Sum_probs=168.7
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...++++. +++|++.+++.+++.+...... .....+.+.++.+.+++++.......++++++|+|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse 112 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY-----QIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAE 112 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc-----CccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHH
Confidence 444454443332222 3589999999999887432211 11234555677778888774322247899999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCC--Cc---cccHHHH
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTS--SY---TVDLAAL 265 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~--~~---~~d~~~l 265 (435)
|++.|++.++.... +++|+....+|++....+... +. .+..+|... .+ .-+++.+
T Consensus 113 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l 186 (421)
T PRK09792 113 AVENAVKIARAHTG------RPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAI 186 (421)
T ss_pred HHHHHHHHHHHhcC------CCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHH
Confidence 99999999986522 456888888888854333221 21 133344321 11 0135778
Q ss_pred HHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--
Q psy10210 266 QSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP-- 334 (435)
Q Consensus 266 ~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~-- 334 (435)
++.+. +++++|+++..++++|.. +.+++|.++|++||+++|+||++++|.. .|. .+.+...
T Consensus 187 ~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~G~---~~a~~~~~~ 258 (421)
T PRK09792 187 ERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR-----TGK---LFAMDHYAD 258 (421)
T ss_pred HHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC-----CCc---hhHHHhcCC
Confidence 88775 357899999889999975 4499999999999999999999998733 121 2222222
Q ss_pred CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 335 GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 335 gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
..|++++ .|.+.+...+|+++.+ +++.+.. .....+++|+ + +....+++.++++.+..+++.+++++
T Consensus 259 ~pDi~t~--gK~l~~G~pigav~~~-~~i~~~~---~~~~~~~T~~-----g--npl~~aaa~a~l~~l~~~~~~~~~~~ 325 (421)
T PRK09792 259 KPDLMTM--AKSLAGGMPLSGVVGN-ANIMDAP---APGGLGGTYA-----G--NPLAVAAAHAVLNIIDKESLCERANQ 325 (421)
T ss_pred CCcEEEe--ehhhcCCCceEEEEEc-HHHHhcc---CCCCcCCCCC-----C--CHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 2476555 4886555778886654 4443321 1122233322 2 22233677788888888888888888
Q ss_pred HHHHHHHHHHhc
Q psy10210 415 YHFNYKSCLQNL 426 (435)
Q Consensus 415 ~~~~~~~~~~~l 426 (435)
..+++++.++.+
T Consensus 326 ~g~~l~~~l~~l 337 (421)
T PRK09792 326 LGQRLKNTLIDA 337 (421)
T ss_pred HHHHHHHHHHHH
Confidence 888887777654
No 270
>PLN02624 ornithine-delta-aminotransferase
Probab=99.67 E-value=8.4e-15 Score=149.79 Aligned_cols=248 Identities=17% Similarity=0.086 Sum_probs=162.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+.....+ ....+...++.+.++++++. +.++++++|+||+..|++.++.....++|.
T Consensus 92 ~~p~v~~ai~~ql~~~~~~~~------~~~~~~~~~la~~L~~~~~~---~~~~f~~SGseA~e~AlklAr~~~~~~~g~ 162 (474)
T PLN02624 92 CHPKIIKALTEQAEKLTLSSR------AFYNDKFPEFAEYLTSMFGY---DMVLPMNTGAEGVETAIKLARKWGYEKKGI 162 (474)
T ss_pred CCHHHHHHHHHHHHhcCCccc------ccCCHHHHHHHHHHHhhcCC---CeEEEeCChHHHHHHHHHHHHHHHHhhcCC
Confidence 489999999999987533321 11234556677778887754 378999999999999999988765444554
Q ss_pred C--CCeEEEeCCCchhHHHHHHHcCC-------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210 224 S--LPEIVLPTTAHPAFDKAANYFGM-------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPY 285 (435)
Q Consensus 224 ~--~~~viv~~~~~~~~~~~~~~~g~-------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt 285 (435)
+ +..|+....+|++....+..... .+..+|. -|++.+++.++ +++++|+++.+++++
T Consensus 163 ~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~iaaiiiEpv~~~~ 237 (474)
T PLN02624 163 PKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGDRIAAFLFEPIQGEA 237 (474)
T ss_pred CCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCCCEEEEEECCccCCC
Confidence 3 45677777777775433322211 1222322 26888988886 468899999999999
Q ss_pred ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCC--CCCCccEEEecCCCCCCcc-CCcEEEEE
Q psy10210 286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDF--SLPGVTSISVDTHKYGFTP-KGSSVVLY 358 (435)
Q Consensus 286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~--~~~gvd~~~~s~hK~~~~p-~g~g~il~ 358 (435)
|.+-+ +++|.++|++||+++|+||+|.|+.. .|. .+.. .....|+++++ |.+.++ ..+|+++.
T Consensus 238 G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr-----tG~---~~a~~~~~i~pDiv~ls--K~lggG~~pigav~~ 307 (474)
T PLN02624 238 GVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR-----TGK---MLACDWEEVRPDVVILG--KALGGGVIPVSAVLA 307 (474)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc-----Ccc---hhhHHhcCCCCCEEEec--ccccCCCCcceeeee
Confidence 98844 99999999999999999999987532 121 2222 22235888875 764444 56788666
Q ss_pred eCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 359 RDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 359 ~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
++ ++.... .+...+.++ .+ +....+++.++++.+..+++.++++++.+.+++.++++
T Consensus 308 ~~-~i~~~~---~~~~~~~T~-----~g--~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l 364 (474)
T PLN02624 308 DK-DVMLCI---KPGEHGSTF-----GG--NPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKI 364 (474)
T ss_pred cH-HHHhHh---ccCCcCCCC-----CC--CHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 54 443221 122222222 22 22234577778888777777778877777777666554
No 271
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=6.9e-15 Score=153.51 Aligned_cols=230 Identities=13% Similarity=0.109 Sum_probs=160.4
Q ss_pred HHHHHHHHHhCCCCCCCCCccccccc-CChHhH---HHHHHH-HHHhhcCCCCC-CCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210 117 ILELVSNYLARGHYDWKHGRVSGAVY-YYQQDL---VDLLTE-VFGLTSYTNPL-HPDIFPGVCKMEAEVIKMCARMFNG 190 (435)
Q Consensus 117 i~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~l---~~~i~~-~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~la~l~g~ 190 (435)
+.+.+.++...+...|.-+...++.. ...|.. .+..-+ .+.. .-++.. .-+.--.......+..+..|+.||+
T Consensus 111 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~~~p~g~~f~~f~Gen~fr~-Dlte~~~~LddL~~~eG~i~eAq~~AA~~fgA 189 (720)
T PRK13578 111 FFDTLTDYVEMGNSTFDCPGHQGGQFFRKHPAGRQFYDFFGENLFRA-DMCNADVKLGDLLIHEGAAKDAQKHAAKVFNA 189 (720)
T ss_pred HHHHHHHHHhCCCceeeCCcCCCCCCCCcChhhhHHHHHhhhhhhhh-hcccccccCCCCCCCChHHHHHHHHHHHHhCC
Confidence 78889999888888886555443332 123332 222211 1111 111100 0111111234566777889999999
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCEEEEEecC--CC---ccccH--
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMKVKHIRLT--SS---YTVDL-- 262 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~v~~vp~~--~~---~~~d~-- 262 (435)
+. .-++++|+|.+|..++.+.+.+++. |+++..+|-+...+ +...|+.+++++.. .. +.++.
T Consensus 190 d~--tyFlvNGTS~gn~a~i~a~~~~Gd~--------VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~Gi~g~I~~~~ 259 (720)
T PRK13578 190 DK--TYFVLNGTSASNKVVTNALLTPGDL--------VLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDAHC 259 (720)
T ss_pred Cc--eEEEeCChhHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHHcCCeEEEeeccccccCCcCCCChHH
Confidence 75 4789999999999999999999887 99999999999985 88899999999764 21 23454
Q ss_pred ---HHHHHHhhcC----------ceEEEEeCCCCCcccccCHHHHHHH-HHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 263 ---AALQSAITGN----------TVMLVGSMPNFPYGTMDDIGAIAKL-GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 263 ---~~l~~~i~~~----------~~~v~~~~p~nptG~~~~i~~i~~l-a~~~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
+.++++|.++ .+++++++|+. .|.+.++++|+++ +++++ +||+|+||++.........++ ++
T Consensus 260 ~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~--p~ 335 (720)
T PRK13578 260 FDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADC--SP 335 (720)
T ss_pred ccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcccccC--Ch
Confidence 4488888654 58999999988 8999999999999 67888 999999999875421111111 11
Q ss_pred CCCCCCCcc----EEEecCCCCCCccCCcEEEEEeCCc
Q psy10210 329 FDFSLPGVT----SISVDTHKYGFTPKGSSVVLYRDLK 362 (435)
Q Consensus 329 ~d~~~~gvd----~~~~s~hK~~~~p~g~g~il~~~~~ 362 (435)
.. ...|.| +++.|+||.+.+-..+|++.+++..
T Consensus 336 ~a-l~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~ 372 (720)
T PRK13578 336 LL-LELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH 372 (720)
T ss_pred hh-hhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc
Confidence 21 234677 9999999998787888998887654
No 272
>PRK05965 hypothetical protein; Provisional
Probab=99.67 E-value=7e-15 Score=149.69 Aligned_cols=278 Identities=16% Similarity=0.088 Sum_probs=178.9
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...+++.. +++|++.+++.+++.+..+.... +....+...++.+.+++++..+. +.++++++|+
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGS 117 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGY----FHFGSEPAIRLAAKLAERAPGSL-NHVYFTLGGS 117 (459)
T ss_pred CCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccc----cccCCHHHHHHHHHHHhhCCCCc-CEEEEeCChh
Confidence 3445555544333222 34899999999998864322211 11234555677788888874322 4799999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCc----ccc----
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSY----TVD---- 261 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~----~~d---- 261 (435)
||+..|++.++..... +|. .+.+||....+|++....+.. .+. .+..+|....+ .-|
T Consensus 118 EAve~AlKlAr~~~~~-~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (459)
T PRK05965 118 DAVDSAVRFIRHYWNA-TGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAI 196 (459)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHH
Confidence 9999999999877543 343 356788888888886433222 111 12333322101 112
Q ss_pred ----HHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 262 ----LAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 262 ----~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
++++++.+. +++.+|+++..+...|.+ +.++++.++|++||+++|.||++.||-. ....+
T Consensus 197 ~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGR--------tG~~~ 268 (459)
T PRK05965 197 IAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGR--------TGPLF 268 (459)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCcc--------Cchhh
Confidence 356777775 467889998877767766 6799999999999999999999998833 22233
Q ss_pred CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
.+...|+ |+++++ |.+.+. .++|.++.+++ +.+...... ....+++|+..++ ..+++.++++.
T Consensus 269 a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnpl-------~~Aaa~a~L~~ 338 (459)
T PRK05965 269 ACEAEGVVPDLMTVA--KGLTSGYVPMGAVLMSDH-VYQGIADGAGAAAPVGHGYTYSAHPV-------SAAVGLEVLRL 338 (459)
T ss_pred hHhhcCCCCCeEEec--hhhccCCcceeEEEEcHH-HHHHHhccccccccccccCCCCCCHH-------HHHHHHHHHHH
Confidence 3434444 888887 875555 36788776654 332210000 1123334333333 33788899999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+.++++.++++++.+++.+.++++..
T Consensus 339 l~~~~l~~~~~~~g~~l~~~l~~l~~ 364 (459)
T PRK05965 339 YHEGGLLANGQKAGPRFAAGLDALRA 364 (459)
T ss_pred HHhccHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999988887643
No 273
>PRK04311 selenocysteine synthase; Provisional
Probab=99.67 E-value=1.5e-14 Score=146.38 Aligned_cols=199 Identities=16% Similarity=0.227 Sum_probs=137.6
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcCh-hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFP-GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+++.+++.+++..+. .+.++... ........+++.+++++|+. ..+++++|+.|+.+++.++ .+++
T Consensus 99 ~~~v~eav~~~~~~~~---~le~~l~~g~~g~r~~~~e~~lA~l~Gae---~a~vv~sgtaAl~l~l~~l-~~Gd----- 166 (464)
T PRK04311 99 SEAAIEAVTEAARGYS---NLEYDLATGKRGSRDRALAALLCALTGAE---DALVVNNNAAAVLLALNAL-AAGK----- 166 (464)
T ss_pred CHHHHHHHHHHHhccc---ccccchhhcccchHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHh-CCCC-----
Confidence 5677777877766532 12222211 11122447788999999875 3578888999999988664 3444
Q ss_pred CCCeEEEeCCCchh------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCC--cc--cccCHHH
Q psy10210 224 SLPEIVLPTTAHPA------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFP--YG--TMDDIGA 293 (435)
Q Consensus 224 ~~~~viv~~~~~~~------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~np--tG--~~~~i~~ 293 (435)
+||+++..|.. +...++..|+++++++.+ ...++++++++++++|++|++++++|+ +| ...|+++
T Consensus 167 ---eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~e 241 (464)
T PRK04311 167 ---EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAE 241 (464)
T ss_pred ---EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCCHHH
Confidence 49999876552 334567789999998764 245799999999999999999999998 45 4579999
Q ss_pred HHHHHHHcCCcEEEeccccchhhhcccccCCCCCC--CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 294 IAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP--FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 294 i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~--~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
|+++|++||+++++|++.|.+. .+. ..|.+..+ .+....|+|++++|+|||++||. +|+++.+ +++.
T Consensus 242 I~~lak~~gi~vivD~gsG~l~-~~~-~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~-~~li 310 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLV-DLS-QYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGK-KELI 310 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccc-cch-hccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEc-HHHH
Confidence 9999999999999999754321 110 01111112 12334689999999999977774 6875554 4544
No 274
>PRK07482 hypothetical protein; Provisional
Probab=99.67 E-value=4.9e-15 Score=150.90 Aligned_cols=276 Identities=14% Similarity=0.023 Sum_probs=177.5
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+.++. +++|++.+++.+++.+..+..+. .....+...++.+.+++++..+- +.++++++||
T Consensus 47 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~----~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGS 121 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTY----VGHGTEASITLSKRIIDRAPAGM-SKVYYGLSGS 121 (461)
T ss_pred CCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccc----cccCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence 3455555544443322 35899999999999874322221 11235667778888888874322 4799999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc----------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT---------- 259 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~---------- 259 (435)
||+..|++.++..... +|. .+++||....+|++....+... | ..+..+|....+.
T Consensus 122 EAve~AlKlAr~~~~~-~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (461)
T PRK07482 122 DANETQIKLVWYYNNV-LGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ 200 (461)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence 9999999999876433 343 2567888888888854332221 1 1123333221100
Q ss_pred ---ccHHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 260 ---VDLAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 260 ---~d~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
-+++++++.+. +++.+|+++......|.+ +.+++|.++|++||+++|+||++.||-. ....
T Consensus 201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGR--------tG~~ 272 (461)
T PRK07482 201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGR--------LGSM 272 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCc--------Ccch
Confidence 14677888774 357888888877666766 5699999999999999999999998833 2223
Q ss_pred CCCCCCCc--cEEEecCCCCCCccC-CcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHH
Q psy10210 329 FDFSLPGV--TSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMM 401 (435)
Q Consensus 329 ~d~~~~gv--d~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~ 401 (435)
+.+...|+ |+++++ |.+.+.. ++|.++.+++ +.+...... ....+++|+..+ ...+++.++++
T Consensus 273 ~a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~gnp-------l~~Aaa~a~L~ 342 (461)
T PRK07482 273 FGSDHYGIEPDLITVA--KGLTSAYAPLSGSIVGEK-VWDVLEQGSDEHGAIGHGWTYSGHP-------ICAAAALANLD 342 (461)
T ss_pred hhHHhcCCCCCEEEEc--cccccCccccceeeecHH-HHHHHhcccccCCccccCCCCCcCH-------HHHHHHHHHHH
Confidence 33444444 888876 8755543 6777676654 322110000 112333333222 33478889999
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 402 YFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 402 ~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+.++++.+++++..+.+.+.++++
T Consensus 343 ~~~~~~l~~~~~~~g~~l~~~L~~l 367 (461)
T PRK07482 343 ILERENLVGNAAEVGAYFRARLRAA 367 (461)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888754
No 275
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.67 E-value=9e-15 Score=147.59 Aligned_cols=249 Identities=14% Similarity=0.067 Sum_probs=163.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+...... ....+...++.+.+++++.... +.++++++|+||+..|++.++..... +|
T Consensus 92 ~hp~v~~Av~~ql~~l~~~~~------~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~t~~-~g- 162 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQPLHSQ------ELLDPLRALLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSP-RG- 162 (442)
T ss_pred CCHHHHHHHHHHHHhCCCccc------ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHhh-cC-
Confidence 489999999999876422211 1124556677888888875433 37899999999999999999876421 12
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccccHHHHHHHhh------cCceEEEEeCCCCC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTVDLAALQSAIT------GNTVMLVGSMPNFP 284 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~d~~~l~~~i~------~~~~~v~~~~p~np 284 (435)
+++|+....+|++....+... +- .+..+|. .|.+++++.+. +++.+|+++.....
T Consensus 163 -r~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~ 236 (442)
T TIGR03372 163 -KFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDVAAIILEPIQGE 236 (442)
T ss_pred -CcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcEEEEEEeCccCC
Confidence 456999998888855443332 21 1223332 25666766664 35788888887777
Q ss_pred cccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEE
Q psy10210 285 YGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVL 357 (435)
Q Consensus 285 tG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il 357 (435)
.|.+.+ ++++.++|++||+++|+||++.||-. .| ..+.+...|+ |++++ .|.+.+. .++|.++
T Consensus 237 gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~e~~gv~PDivt~--gK~lg~G~~Pigavv 306 (442)
T TIGR03372 237 GGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGR-----TG---KMFACEHEGVQPDILCL--AKALGGGVMPIGATI 306 (442)
T ss_pred CCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCc-----cc---cchhhhhcCCCCCeeee--hhhhcCCcccceEEE
Confidence 777755 99999999999999999999987622 22 2334433443 87775 4875544 3577766
Q ss_pred EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+ +++.+... ..+...+++ ..| +....+++.++++.+.++++.+++++..+++.+.++.+
T Consensus 307 ~~-~~i~~~~~-~~~~~~~~T-----~~g--np~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 307 AT-EAVFSVLF-DNPFLHTTT-----FGG--NPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred ec-HHHHHhhh-ccCccccCC-----CCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 65 44443211 011112222 222 22334678899999988899999999988888777654
No 276
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.67 E-value=6.4e-15 Score=148.28 Aligned_cols=247 Identities=15% Similarity=0.048 Sum_probs=160.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+...... ....+...++.+.++++++. +.++++++|+||+..|++.++.....+.+.
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~~~~~~~ 126 (406)
T PRK12381 56 AHPALREALNEQASKFWHTGN------GYTNEPVLRLAKKLIDATFA---DRVFFCNSGAEANEAALKLARKYAHDRYGS 126 (406)
T ss_pred CCHHHHHHHHHHHhhcccccC------ccCCHHHHHHHHHHHhhCCC---CeEEEcCCcHHHHHHHHHHHHHHHhhcCCC
Confidence 389999999999876422211 11233445677777877643 389999999999999999988664321122
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCE-------------EEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMK-------------VKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-- 288 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~-------------v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-- 288 (435)
.+.+|+..+..|++....+...+.. +..+| ..|++++++.+.+++++|+++ |.+++|.+
T Consensus 127 ~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~aaviiE-Pv~~~gg~~~ 200 (406)
T PRK12381 127 HKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAA-----YNDLNSASALIDDQTCAVIVE-PIQGEGGVIP 200 (406)
T ss_pred CCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeC-----CCCHHHHHHhccCCeeEEEEe-CCcCCCCCcC
Confidence 4567999899888865444333221 11222 247899999998888888885 77777753
Q ss_pred ---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210 289 ---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKY 363 (435)
Q Consensus 289 ---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~ 363 (435)
+.+++|.++|++||+++|+||+|.|+.. .|. .+.+...+ .|++++ .|.+.+...+|+++.++ ++
T Consensus 201 ~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr-----~G~---~~~~~~~~v~pDi~t~--sK~l~gG~~ig~~~~~~-~~ 269 (406)
T PRK12381 201 ADKAFLQGLRELCDRHNALLIFDEVQTGVGR-----TGE---LYAYMHYGVTPDVLTT--AKALGGGFPIGAMLTTE-KC 269 (406)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcchhhCCCC-----Ccc---hhhhHhhCCCCCEEEe--hhhhhCCCceEEEEEcH-HH
Confidence 7799999999999999999999987633 121 12211222 466554 58754556688866654 44
Q ss_pred ccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 364 KHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 364 ~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+.. .....+. +..+ +....+++.++++.+..+++.+++++..+.+.+.++++
T Consensus 270 ~~~~---~~~~~~~-----t~~~--~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 322 (406)
T PRK12381 270 ASVM---TVGTHGT-----TYGG--NPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_pred Hhhc---CCCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 4321 1111111 2222 22233567777777777778888888888888777665
No 277
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.66 E-value=2.5e-15 Score=147.84 Aligned_cols=277 Identities=16% Similarity=0.075 Sum_probs=185.2
Q ss_pred CCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++.++.++..+.. .-+|.|++.+++.+++.+..+.++......| ..++.++++++....+-+.+++|+||++
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-----a~~LA~~L~~~aP~~~l~~vFf~~sGSe 116 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-----AIELAEKLAELAPEGGLDHVFFTDSGSE 116 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCch-----HHHHHHHHHHhCCCCCccEEEEeCCchH
Confidence 3445555444432 2335999999999999987666554443333 4567778888886322358999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCC-CCeEEEeCCCchhHHHHH-HHcC-------------CEEEEEecCC--------Ccc--
Q psy10210 205 SIMMACKAYRDYAREEKGIS-LPEIVLPTTAHPAFDKAA-NYFG-------------MKVKHIRLTS--------SYT-- 259 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~-~~~viv~~~~~~~~~~~~-~~~g-------------~~v~~vp~~~--------~~~-- 259 (435)
|++.|++..+.+... +|.+ +.++|.-...|++-.-.+ ...| ..+.++|... .+.
T Consensus 117 AvEtAlKma~qY~~~-~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~ 195 (449)
T COG0161 117 AVETALKMALQYWRA-RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE 195 (449)
T ss_pred HHHHHHHHHHHHHHh-cCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence 999999999998887 7776 555887778887733222 2222 1233444321 111
Q ss_pred --ccHHHHHHHhhc----CceEEEEeCCCCC-cccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 260 --VDLAALQSAITG----NTVMLVGSMPNFP-YGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 260 --~d~~~l~~~i~~----~~~~v~~~~p~np-tG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
-..++|++.|.. +.+++++...... .|.+ ..++++.++|++||+++|.||+-.|| |+....
T Consensus 196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGF--------GRTG~~ 267 (449)
T COG0161 196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGF--------GRTGKM 267 (449)
T ss_pred HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCC--------CcCchh
Confidence 225667777753 5677777776665 5555 56999999999999999999999988 555567
Q ss_pred CCCCCCCc--cEEEecCCCCCC-ccCCcEEEEEeCCcccccccc-ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210 329 FDFSLPGV--TSISVDTHKYGF-TPKGSSVVLYRDLKYKHCQYF-VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 329 ~d~~~~gv--d~~~~s~hK~~~-~p~g~g~il~~~~~~~~~~~~-~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
|.....|+ |+++++ |.+- |-.+.|.++++++-+...... ...-..|.+|..+++++ |++.+.++.+.
T Consensus 268 FA~e~~gi~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlac-------AaAla~L~i~e 338 (449)
T COG0161 268 FACEHAGIVPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLAC-------AAALANLDILE 338 (449)
T ss_pred hhhhhcCCCCCeeeec--ccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHH-------HHHHHHHHHHH
Confidence 77777776 999888 6432 224567767776543211000 11112333343333333 78889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-cC
Q psy10210 405 FEAQVWICVRYHFNYKSCLQN-LS 427 (435)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~-l~ 427 (435)
++++.++++++..++.+.++. +.
T Consensus 339 ~e~l~~~~~~~~~~l~~~L~~~l~ 362 (449)
T COG0161 339 EEDLLERVAEIGAYLQAGLQAALA 362 (449)
T ss_pred hcCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999988886 44
No 278
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.66 E-value=6.8e-15 Score=149.44 Aligned_cols=254 Identities=13% Similarity=0.082 Sum_probs=165.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+...... ....+...++.+.+++++..+. +.++++++|+||+..|++.++..... +|
T Consensus 99 ~~p~v~~Ai~~ql~~l~~~~~------~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEAve~AlklAr~~t~~-~g- 169 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQPLHSQ------ELLDPLRAMLAKTLAALTPGKL-KYSFFCNSGTESVEAALKLAKAYQSP-RG- 169 (459)
T ss_pred CCHHHHHHHHHHHhhCccccc------ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCchHHHHHHHHHHHHHhcc-CC-
Confidence 489999999999886422211 1224556677778888775333 37999999999999999999876532 22
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CCEEEE---EecCCCc----cccHHHHHHHhh------cCceEEEEeCCCCCccccc
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GMKVKH---IRLTSSY----TVDLAALQSAIT------GNTVMLVGSMPNFPYGTMD 289 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~~v~~---vp~~~~~----~~d~~~l~~~i~------~~~~~v~~~~p~nptG~~~ 289 (435)
+..|+....+|++....+... +-.... .|..++. ..|.+++++.+. +++.+|+++......|.+.
T Consensus 170 -r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~ 248 (459)
T PRK11522 170 -KFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVIL 248 (459)
T ss_pred -CcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCcc
Confidence 446888888888855443332 211110 1110100 126778888775 3567888888877778874
Q ss_pred C----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCc
Q psy10210 290 D----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLK 362 (435)
Q Consensus 290 ~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~ 362 (435)
+ ++++.++|++||+++|+||++.||-. .| ..+.+...| .|+++++ |.+.+. .++|.++.++ +
T Consensus 249 pp~~yl~~lr~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~e~~gv~PDivt~g--K~lggG~~Pigav~~~~-~ 317 (459)
T PRK11522 249 PPEGYLTAVRKLCDEFGALLILDEVQTGMGR-----TG---KMFACEHENVQPDILCLA--KALGGGVMPIGATIATE-E 317 (459)
T ss_pred CCHHHHHHHHHHHHHcCCEEEeccceecCCc-----cc---hhhhhhccCCCCCEEEec--hhhhCCCccceeEEEcH-H
Confidence 4 99999999999999999999987622 22 223333334 3877665 875544 3578867764 4
Q ss_pred cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 363 ~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.+.. ...+...+++|+ | +....+++.++++.+.++++.+++++..+++++.++++
T Consensus 318 i~~~~-~~~~~~~~~T~~-----g--np~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 318 VFSVL-FDNPFLHTTTFG-----G--NPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred HHHHh-ccCCcccCCCCC-----C--CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 33321 111212233322 2 22334788899999988899999999999988887765
No 279
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.66 E-value=4e-15 Score=147.22 Aligned_cols=238 Identities=13% Similarity=0.033 Sum_probs=154.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCE
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMK 248 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~ 248 (435)
.|.+.++|. .+++++|.+ .++.|++||.|+.++..+..++|+. | +.+.|.....+ ....|+.
T Consensus 70 ~~s~~~lE~----~va~~~G~~---~av~v~sGT~Al~ll~~l~l~pGDe--------V--psn~~f~Tt~ahIe~~Gav 132 (450)
T TIGR02618 70 SRNFYHLER----TVRELYGFK---YVVPTHQGRGAENLLSQIAIKPGDY--------V--PGNMYFTTTRYHQEKNGAT 132 (450)
T ss_pred CCcHHHHHH----HHHHHHCCC---eEEEcCCHHHHHHHHHHhCCCCcCE--------E--CCceeHHHHHHHHHhCCeE
Confidence 455666665 556677764 5899999999988765444555543 5 66777665555 6888987
Q ss_pred EEEEecC----------CCccccHHHHHHHhhc----CceEEEEeCCCCCc-ccc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210 249 VKHIRLT----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPY-GTM---DDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 249 v~~vp~~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~npt-G~~---~~i~~i~~la~~~~~~livD~~ 310 (435)
.+.++.+ .+|.+|+++++++|++ ++.+|.+.+++|.. |.+ +++++|.++|++||+++|.|+|
T Consensus 133 ~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaA 212 (450)
T TIGR02618 133 FVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDAT 212 (450)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 7666442 3588999999999986 34577888888865 677 7899999999999999999999
Q ss_pred ccchhhhcc--cccCCCCCCC-C---CCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCcc
Q psy10210 311 LGGFLAPFM--SAAGYPLPPF-D---FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSV 384 (435)
Q Consensus 311 ~~~~~~~~~--~~~g~~~~~~-d---~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~ 384 (435)
....-..|. +..|+...+. + -....+|++++|+||.+++|.| |+++++++++.++.......+ +|. ..
T Consensus 213 R~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~-eG~----~t 286 (450)
T TIGR02618 213 RCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF-EGM----PS 286 (450)
T ss_pred chhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc-CCc----cc
Confidence 865222221 1122222222 0 0122479999999999888986 777889998876644433444 332 11
Q ss_pred ccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCCccc
Q psy10210 385 SGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSDLWL 431 (435)
Q Consensus 385 ~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~l~~ 431 (435)
.|.-++..+.+...++...-...|.++.....+++.+.+++. ++..
T Consensus 287 yGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv 332 (450)
T TIGR02618 287 YGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA-GVPI 332 (450)
T ss_pred cCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 222222233333334555445556665555566666666654 5544
No 280
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.66 E-value=1.1e-14 Score=146.01 Aligned_cols=183 Identities=13% Similarity=0.097 Sum_probs=128.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHH----------hh-------------hhcCCCCCe
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDY----------AR-------------EEKGISLPE 227 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~----------~~-------------~~~g~~~~~ 227 (435)
..+.++|..+.+...++||+... ++-. .+|+.|+..++.++.++ |+ .++-..++.
T Consensus 91 ~~~d~ie~l~~~ra~~lf~a~~a-nvqp-~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 91 QNVDTVEWEAAEHAKELFGAEHA-YVQP-HSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred chHHHHHHHHHHHHHHHhCCCcc-cccC-CCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 45667888888899999988764 4443 45689999999999865 11 001112455
Q ss_pred EEEeCCCchhH---HHHHHHcC--CEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 228 IVLPTTAHPAF---DKAANYFG--MKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 228 viv~~~~~~~~---~~~~~~~g--~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
|+..+..+.+. .......| .+.+..+++ +++.+|.+++++.+.+++..|++++.+|- |...|+++|.++|++|
T Consensus 169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~ 247 (493)
T PRK13580 169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEV 247 (493)
T ss_pred EEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHc
Confidence 77665544331 11122223 456667777 57889999999999999999999988886 5577999999999999
Q ss_pred CCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 302 GIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 302 ~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
|+++++|++|+.++++- -..+ ..+. ..++|++++++||+++||.| |+++++ +++.
T Consensus 248 gA~L~VD~AH~~Gligg-----~~~~~~~~~-~~~~D~vtgT~hKaL~GP~G-G~I~~~-~~l~ 303 (493)
T PRK13580 248 GAVLMVDMAHFAGLVAG-----KVFTGDEDP-VPHADIVTTTTHKTLRGPRG-GLVLAK-KEYA 303 (493)
T ss_pred CCEEEEECchhhceecc-----ccchhhcCC-CCCCcEEEeCChhhccCCCe-EEEEec-HHHH
Confidence 99999999999877641 1100 0111 24699999999999778886 776665 4443
No 281
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.65 E-value=1.1e-14 Score=142.84 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=182.4
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++++++.+.+.++..+.. .+...-+...+..++.+.+|+++|.+. .++.++|-.|+..++.++.++++.
T Consensus 54 ~~~~~~~a~~~~~~~~g~g~~-gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~~i~~l~~~~dl---- 125 (388)
T COG0156 54 SHPELIEAAKAAIRRYGVGAG-GSRLISGTSDLHVELEEELADFLGAEA---ALLFSSGFVANLGLLSALLKKGDL---- 125 (388)
T ss_pred CCHHHHHHHHHHHHHhCCCCC-CcCcccCCcHHHHHHHHHHHHHhCCCc---EEEEcccchhHHHHHHHhcCCCcE----
Confidence 388999999999998654432 334455677788888889999998863 466666799999999999887765
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccccCHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDDIGAIAKL 297 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~i~~i~~l 297 (435)
|+...-.|.+..+.++..+++++..+- .|+++|++.+.+ +.++|++...-+..|.+.|+++|.++
T Consensus 126 ----i~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L 196 (388)
T COG0156 126 ----IFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVEL 196 (388)
T ss_pred ----EEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHH
Confidence 888888999999999999999988874 478999999876 35888888888999999999999999
Q ss_pred HHHcCCcEEEeccccchhhhcccccCCCCC-CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLP-PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG 376 (435)
Q Consensus 298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~-~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g 376 (435)
+++|+.+++|||+|+-+++ +..|.+.. .+......+|++..++.|. +|.. |..+..+..+.+........+.-
T Consensus 197 ~~ky~a~L~VDEAHa~Gv~---G~~GrG~~e~~g~~~~~vdi~~gTlsKA-lGs~--Gg~v~g~~~~~d~L~~~ar~~if 270 (388)
T COG0156 197 AEKYGALLYVDEAHAVGVL---GPNGRGLAEHFGLEPEEVDIIVGTLGKA-LGSS--GGYIAGSAALIDYLRNRARPFIF 270 (388)
T ss_pred HHHhCcEEEEEcccccccc---CCCCccHHHHhCCCCccceEEEEEchhh-hccc--CceeeCcHHHHHHHHHhCCceec
Confidence 9999999999999998877 33344432 1222223469999999999 4544 44466776665543333333332
Q ss_pred CCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHH
Q psy10210 377 GNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 377 g~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~~~~~~~~~ 424 (435)
..+-++...+++.++++.+.. ...+++.++....++...+
T Consensus 271 --------StalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~ 311 (388)
T COG0156 271 --------STALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLK 311 (388)
T ss_pred --------cCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 234455555667777777653 3455666666666664433
No 282
>PLN00144 acetylornithine transaminase
Probab=99.65 E-value=1.1e-14 Score=145.16 Aligned_cols=248 Identities=16% Similarity=0.053 Sum_probs=162.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+...... ....+...++.+.++++.+. +.++++++|+||++.|++.++..... +|.
T Consensus 32 ~~p~v~~ai~~q~~~~~~~~~------~~~~~~~~~la~~l~~~~~~---~~v~f~~sGseA~e~AlklAr~~~~~-~~~ 101 (382)
T PLN00144 32 GDPDWVKAVAEQAGTLAHVSN------VYHTIPQVELAKRLVASSFA---DRVFFCNSGTEANEAAIKFARKYQRV-RAP 101 (382)
T ss_pred CCHHHHHHHHHHHHhcCCccc------cccCHHHHHHHHHHHhcCCC---CeEEEeCCcHHHHHHHHHHHHHHHhc-cCC
Confidence 489999999999886422211 11234556777777777632 38999999999999999999876443 222
Q ss_pred -C-------CCeEEEeCCCchhHHHHHHHcCCE-------------EEEEecCCCccccHHHHHHHhh-cCceEEEEeCC
Q psy10210 224 -S-------LPEIVLPTTAHPAFDKAANYFGMK-------------VKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMP 281 (435)
Q Consensus 224 -~-------~~~viv~~~~~~~~~~~~~~~g~~-------------v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p 281 (435)
+ +++|+....+|++....+....-. +..+|. -|++++++.+. .++++|+++..
T Consensus 102 ~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aavi~eP~ 176 (382)
T PLN00144 102 DKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQKGKTAAVFVEPV 176 (382)
T ss_pred CCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcCCCCeEEEEEccc
Confidence 1 467998888888865444432111 122221 26889998885 36788888888
Q ss_pred CCCcccc--cC--HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEE
Q psy10210 282 NFPYGTM--DD--IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVL 357 (435)
Q Consensus 282 ~nptG~~--~~--i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il 357 (435)
+||.|.. +. +++|.++|++||+++|+||++++|... |.. .+.+......|++++ .|.+.+...+|+++
T Consensus 177 q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~-----g~~-~~~~~~~~~PDi~t~--sK~l~~G~pig~v~ 248 (382)
T PLN00144 177 QGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRT-----GYL-WAHEAYGVEPDIMTL--AKPLAGGLPIGAVL 248 (382)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-----chH-hhhhhcCCCCCEEEe--cccccCCcceEEEE
Confidence 8885555 34 999999999999999999999987431 211 111111112465555 48865557788866
Q ss_pred EeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 358 YRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
.+ +++.+.. .....+.++ .+ +....+++.++++.+..+++.++++++.+.+++.+++
T Consensus 249 ~~-~~~~~~~---~~~~~~~T~-----~~--~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 249 VT-EKVASAI---NPGDHGSTF-----AG--GPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRR 305 (382)
T ss_pred Ec-HHHHhcc---CCCCCCCCC-----CC--CHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 65 4443321 111222222 22 2233467778889998889999999998888776654
No 283
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.65 E-value=1.5e-14 Score=136.09 Aligned_cols=225 Identities=19% Similarity=0.201 Sum_probs=152.9
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHc
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYF 245 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~ 245 (435)
-|....+|+ +++.+-|.-. .+.+++|..|+.+++..+...||. |+.++.-|.+ +....+.+
T Consensus 61 NPT~~vlE~----RiAaLEGG~a---a~a~aSG~AA~~~ai~~la~aGD~--------iVss~~LYGGT~~lf~~tl~~~ 125 (426)
T COG2873 61 NPTTDVLEE----RIAALEGGVA---ALAVASGQAAITYAILNLAGAGDN--------IVSSSKLYGGTYNLFSHTLKRL 125 (426)
T ss_pred CchHHHHHH----HHHHhhcchh---hhhhccchHHHHHHHHHhccCCCe--------eEeeccccCchHHHHHHHHHhc
Confidence 345555554 5566665543 477889999999999999999987 8888876666 55666778
Q ss_pred CCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 246 GMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 246 g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
|+++++++.+ |++.++++|++||++|++....||.+.+-|+++|+++|+++|++++||...+...+
T Consensus 126 Gi~v~fvd~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl--------- 191 (426)
T COG2873 126 GIEVRFVDPD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL--------- 191 (426)
T ss_pred CcEEEEeCCC-----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee---------
Confidence 9999999743 69999999999999999999999999999999999999999999999999765322
Q ss_pred CCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCcc--c-ccccc----ccCCCCCCCCCC----Ccc------ccC
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKY--K-HCQYF----VTSDWPGGNYGS----PSV------SGS 387 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~--~-~~~~~----~~~~~~gg~~~~----~~~------~gs 387 (435)
..|++ .|+|+++-|..||.+|- ..+|.+++-...+ . ...|. -.+.|.|-.|.. +.+ .+-
T Consensus 192 ~rP~~---hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~l 268 (426)
T COG2873 192 CRPIE---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLL 268 (426)
T ss_pred cchhh---cCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHH
Confidence 22454 48999999999995442 3344444433322 2 11111 112233322111 000 011
Q ss_pred CC-chHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 388 RS-GGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 388 r~-~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
|. |+++...-+.+...|.|.+.-|++|..+++....+-|
T Consensus 269 RDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L 308 (426)
T COG2873 269 RDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFL 308 (426)
T ss_pred HhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHH
Confidence 11 1122223333455688888888888888877665544
No 284
>PRK12403 putative aminotransferase; Provisional
Probab=99.64 E-value=2e-14 Score=146.34 Aligned_cols=259 Identities=18% Similarity=0.131 Sum_probs=161.4
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+.+.+ .....+...++.+.++++++... +.++++++|+||+..|++.++..... +|.
T Consensus 71 ~hp~v~~A~~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AiklAr~~~~~-~g~ 144 (460)
T PRK12403 71 GRKDLAAAAARQMEQLPYYNMF----FHTTHPAVIELSELLFSLLPGHY-SHAIYTNSGSEANEVLIRTVRRYWQV-LGK 144 (460)
T ss_pred CCHHHHHHHHHHHHhCCCeecc----cccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHh-hCC
Confidence 5899999999999875433221 12234566777788888885332 37999999999999999999876432 232
Q ss_pred C-CCeEEEeCCCchhH-HHHHHHcCCE-----------EEEEecCCCc----c--------ccHHHHHHHhh----cCce
Q psy10210 224 S-LPEIVLPTTAHPAF-DKAANYFGMK-----------VKHIRLTSSY----T--------VDLAALQSAIT----GNTV 274 (435)
Q Consensus 224 ~-~~~viv~~~~~~~~-~~~~~~~g~~-----------v~~vp~~~~~----~--------~d~~~l~~~i~----~~~~ 274 (435)
+ +..|+....+|++. ..+....|.+ +..+|....+ . .+.+++++.+. +++.
T Consensus 145 ~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ia 224 (460)
T PRK12403 145 PQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVA 224 (460)
T ss_pred CCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceE
Confidence 2 34566656666664 3333333321 3334321100 0 11355665552 3577
Q ss_pred EEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCC
Q psy10210 275 MLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGF 348 (435)
Q Consensus 275 ~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~ 348 (435)
+|+++......|.+.+ +++|.++|++||+++|+||+++||-. .| ..+.+...| .|+++++ |.+.
T Consensus 225 avI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR-----tG---~~~a~e~~gv~PDiv~~g--K~lg 294 (460)
T PRK12403 225 GFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGR-----TG---EWFAHEHFGFEPDTLSIA--KGLT 294 (460)
T ss_pred EEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Cc---hhhhhhhcCCCCCeEEEc--cccc
Confidence 8888887777787754 99999999999999999999988732 12 223333333 3888754 8755
Q ss_pred ccC-CcEEEEEeCCccccccccccCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH-HHHHHHHHHHHh
Q psy10210 349 TPK-GSSVVLYRDLKYKHCQYFVTSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV-RYHFNYKSCLQN 425 (435)
Q Consensus 349 ~p~-g~g~il~~~~~~~~~~~~~~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~-~~~~~~~~~~~~ 425 (435)
+.. .+|.++.+ +++.+........+ .+++|+ | +....+++.++|+.+.++++.++++ +..+++++.+++
T Consensus 295 gG~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~-----g--nPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~ 366 (460)
T PRK12403 295 SGYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYS-----G--HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLRE 366 (460)
T ss_pred ccccceEEEEEC-HHHHHHHhcCCCccccCCCCC-----C--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 443 67776765 44433211000111 222222 2 2334478889999998888888886 788888777665
Q ss_pred c
Q psy10210 426 L 426 (435)
Q Consensus 426 l 426 (435)
+
T Consensus 367 l 367 (460)
T PRK12403 367 V 367 (460)
T ss_pred H
Confidence 4
No 285
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=2.5e-14 Score=143.63 Aligned_cols=254 Identities=18% Similarity=0.055 Sum_probs=160.7
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+..+..+. ...+...++.+.++++.+. .+.++++++|+||++.|++.++..... +|.
T Consensus 57 ~~p~v~~ai~~q~~~~~~~~~~------~~~~~~~~la~~L~~~~~~--~~~v~f~~sGseA~e~AlklAr~~~~~-~g~ 127 (408)
T PRK04612 57 NDPDLVAALTEQAGKLWHTSNV------FYSAPPLKLAEELVTASRF--AEKVFLCNSGTEANEAAIKLVRKWASS-QGR 127 (408)
T ss_pred CCHHHHHHHHHHHHhccccccc------cCCHHHHHHHHHHHhhCCC--CCEEEEcCchHHHHHHHHHHHHHHHHh-hCC
Confidence 4899999999988764222111 1234456677777777643 248999999999999999999876533 342
Q ss_pred --CCCeEEEeCCCchhHHHHHHHc-CCEEEE---EecCCC----ccccHHHHHHHhhcCceEEEEeCCCCCcccc-----
Q psy10210 224 --SLPEIVLPTTAHPAFDKAANYF-GMKVKH---IRLTSS----YTVDLAALQSAITGNTVMLVGSMPNFPYGTM----- 288 (435)
Q Consensus 224 --~~~~viv~~~~~~~~~~~~~~~-g~~v~~---vp~~~~----~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~----- 288 (435)
.+++|+....+|++....+... +-.... -|...+ -..|++.+++++.++..+.++..|.+++|.+
T Consensus 128 ~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~~~gg~~~~~~ 207 (408)
T PRK04612 128 PADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQGEGGVMPAAP 207 (408)
T ss_pred CCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCccCCCCCcCCCH
Confidence 3567888888888855443322 211100 011110 0137888998886555555556666666655
Q ss_pred cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
+.+++|.++|++||+++|+||+|+++.. .| ..+.....++ |+.++ .|.+.+...+|+++.++ ++.+.
T Consensus 208 ~~l~~l~~l~~~~g~llI~DEv~tg~gr-----~G---~~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~-~~~~~ 276 (408)
T PRK04612 208 GFLARVRALCDQHDALLVLDEIQCGMGR-----TG---TLFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGP-KVAET 276 (408)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCc-----CC---chhhhhhcCCCCCEEEE--cchhcCCCceEEEEECH-HHHhh
Confidence 3599999999999999999999987633 12 1222222333 55555 48755446688876664 44322
Q ss_pred cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 367 QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 367 ~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
. .....+++ ..++ ....+++.++++.+.++++.++++++.+++++.++++.
T Consensus 277 ~---~~~~~~~t-----~~~~--p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~ 327 (408)
T PRK04612 277 M---QFGAHGTT-----FGGN--PLAAAVARVALRKLASPQIAANVARQSAALRAGLEALN 327 (408)
T ss_pred h---cCCCcCCC-----CCCC--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 1 11122222 2222 33346777888888888899999999988888877653
No 286
>PRK06541 hypothetical protein; Provisional
Probab=99.64 E-value=3.3e-14 Score=144.67 Aligned_cols=277 Identities=14% Similarity=0.068 Sum_probs=172.0
Q ss_pred CCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...+. ..-+++|++.+++.+++.+..+.... ....+...++.+.+++++..+- +.++++++|+|
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse 123 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLW-----SYAHPPAIELAERLAALAPGDL-NRVFFTTGGSE 123 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcccc-----ccCCHHHHHHHHHHHHhCCCCc-CEEEEcCCcHH
Confidence 445555443332 22234899999999998864332211 1223556667777888764322 48999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC-----cccc----
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS-----YTVD---- 261 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~-----~~~d---- 261 (435)
|++.|++.++..... +|. .+.+|+....+|++....+... |. .+..+|.+.. +.-+
T Consensus 124 Ave~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 124 AVESAWKLAKQYFKL-TGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHHh-cCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence 999999999876432 232 2567888888888855433322 11 1333443211 1111
Q ss_pred ----HHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 262 ----LAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 262 ----~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
++.+++.+. +++.+|+++..+++.|.+.+ +++|.++|++||+++|+||++.||-. .| ..+
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR-----~G---~~~ 274 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR-----LG---EMF 274 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---hhh
Confidence 366777775 34677777777888898855 99999999999999999999987732 12 122
Q ss_pred CCCCCC--ccEEEecCCCCCCccC-CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210 330 DFSLPG--VTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406 (435)
Q Consensus 330 d~~~~g--vd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~ 406 (435)
.+...| .|+++++ |.+.+.. ++|+++.+++. .+.. .... ...+...|..+ +..+++++.++++.+..+
T Consensus 275 a~~~~gv~PDivt~g--K~l~~G~~pigav~~~~~i-~~~~---~~~~-~~~~~~~T~~g--np~~~aaala~l~~l~~~ 345 (460)
T PRK06541 275 GCERFGYVPDIITCA--KGITSGYSPLGAMIASDRL-FEPF---LDGP-TMFLHGYTFGG--HPVSAAVALANLDIFERE 345 (460)
T ss_pred hhhhcCCCCCEEEec--ccccCCccceeEEEEcHHH-HHHh---hcCC-CccccCCCCCC--CHHHHHHHHHHHHHHHhc
Confidence 232233 4877754 8654443 57887766543 2221 1110 00001112222 223456788889998888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q psy10210 407 AQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
++.+++++..+++.+.++++.+
T Consensus 346 ~~~~~~~~~g~~l~~~L~~l~~ 367 (460)
T PRK06541 346 GLLDHVRDNEPAFRATLEKLLD 367 (460)
T ss_pred cHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999988887643
No 287
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.64 E-value=2e-14 Score=145.93 Aligned_cols=275 Identities=15% Similarity=0.066 Sum_probs=176.1
Q ss_pred CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...+.+. -+++|++.+++.+++.+..+.... ....+...++.+.++++++..- +.++++++|||
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGse 125 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-----GCTHEPAIELAERLAALTGGTL-GHAFFASDGAS 125 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCCHH
Confidence 44555544333322 224899999999998874332211 1123456678888888875432 37999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc------------
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY------------ 258 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~------------ 258 (435)
|+..|++.++..... +|. .+++|+....+|++....+... |- .+..+|.....
T Consensus 126 Ave~AlKlA~~~~~~-rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 126 AVEIALKMSFHAWRN-RGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence 999999999876433 343 3567998888888854332221 11 12334332110
Q ss_pred cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 259 TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 259 ~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
.-+++++++.+. +++.+|+++. .+...|.+ +.++++.++|++||+++|.||++.||-. ....+.
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GR--------tG~~fa 276 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGR--------TGTFFA 276 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCC--------CcchhH
Confidence 013567777775 4678888887 36666765 6799999999999999999999998732 222344
Q ss_pred CCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210 331 FSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 331 ~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
+...|+ |+++++ |.+.+. .++|.++.+++ +.+...... ..+.+++|+ | +....+++.++|+.+.
T Consensus 277 ~~~~gv~PDivt~g--Kgl~gG~~Pi~av~~~~e-i~~~~~~~~~~~~~~~~~T~~-----g--npl~~aaa~a~L~~i~ 346 (453)
T PRK06943 277 CEQAGVWPDFLCLS--KGISGGYLPLSLVLSRDA-IFAAFYDDDVTRGFLHSHSYT-----G--NPLACRAALATLDLFA 346 (453)
T ss_pred HHhCCCCCCeEeee--hhhccCcccceEEEEcHH-HHHhhcccCccCCccCCCCCC-----C--CHHHHHHHHHHHHHHH
Confidence 444444 888886 765555 36788777654 332211000 001233332 2 2233478889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 405 FEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
++++.+++++..+++.+.++++.
T Consensus 347 ~~~l~~~~~~~G~~l~~~L~~l~ 369 (453)
T PRK06943 347 EDDVLARNARKSARLRAALAPLA 369 (453)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999888887763
No 288
>PRK10534 L-threonine aldolase; Provisional
Probab=99.64 E-value=1.6e-15 Score=148.70 Aligned_cols=167 Identities=16% Similarity=0.122 Sum_probs=111.9
Q ss_pred HHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH--HHHcC-CEEEEEecCC
Q psy10210 180 VIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA--ANYFG-MKVKHIRLTS 256 (435)
Q Consensus 180 ~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~--~~~~g-~~v~~vp~~~ 256 (435)
+++.+++++|.++ .++++||++++.+++.+...+++. |+++.|.|...... +...+ ++++.+++++
T Consensus 39 L~~~la~~~g~~~---~~v~~~g~~a~~~~l~~~~~~gd~--------vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (333)
T PRK10534 39 LQDYAAELSGKEA---ALFLPTGTQANLVALLSHCERGEE--------YIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAA 107 (333)
T ss_pred HHHHHHHHhCCCe---EEEeCchHHHHHHHHHHhcCCCCe--------eEEechhhhhHhcCCchHHhcCceEEeecCCC
Confidence 3344555666543 478888999999999888776665 99998888643321 34444 6888888777
Q ss_pred CccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210 257 SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~ 327 (435)
++.+|++++++++++ ++++|++++|+ +|.+ +.+++|.++|++|++++++||+|..+.... .+.
T Consensus 108 ~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~---~~~--- 179 (333)
T PRK10534 108 DGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVA---YGC--- 179 (333)
T ss_pred CCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHH---cCC---
Confidence 889999999999976 58899999766 5998 455667788999999999999976221100 011
Q ss_pred CCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccc
Q psy10210 328 PFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQ 367 (435)
Q Consensus 328 ~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~ 367 (435)
.........|.++++++|....+ .|+.++.++++.+..
T Consensus 180 ~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~ 217 (333)
T PRK10534 180 ELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRA 217 (333)
T ss_pred CHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHH
Confidence 11100112355667889963334 564456677776543
No 289
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=1.8e-14 Score=146.45 Aligned_cols=268 Identities=16% Similarity=0.086 Sum_probs=167.8
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...+++.. +++|++.+++.+++.+..+... .....+...++.+.+++++.......++++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCF-----MVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred CCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccc-----cccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 3455555544433222 3489999999999886422111 1122356667888888887543223789999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc------c---
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT------V--- 260 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~------~--- 260 (435)
||+..|++.++.... +++|+....+|++....+... +. .+..+|....+. .
T Consensus 128 eA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (443)
T PRK06058 128 EAVENAVKIARSYTG------RQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGE 201 (443)
T ss_pred HHHHHHHHHHHHhhC------CCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchH
Confidence 999999998876522 356999999998866544332 10 123333211111 0
Q ss_pred -----cHHHHHHHhh-cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 261 -----DLAALQSAIT-GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 261 -----d~~~l~~~i~-~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
.++.+++.+. +++++|+++..+...|.+ +.+++|.++|++||+++|.||++.||... | ..+.
T Consensus 202 ~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt-----G---~~fa 273 (443)
T PRK06058 202 EAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART-----G---AWFA 273 (443)
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-----h---hhhH
Confidence 1233444443 456777766555444555 45999999999999999999999987431 2 1222
Q ss_pred CCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210 331 FSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ 408 (435)
Q Consensus 331 ~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~ 408 (435)
....| .|+++++ |.+.+...+|+++.++ ++.+.. .....+++|+..+ ...+++.++++.+..+++
T Consensus 274 ~~~~gv~PDiv~~g--K~l~~G~Pi~av~~~~-~i~~~~---~~~~~~~T~~gnp-------l~~aaa~a~L~~~~~~~l 340 (443)
T PRK06058 274 CEHEGIVPDLITTA--KGIAGGLPLSAVTGRA-EIMDAP---HPGGLGGTYGGNP-------VACAAALAAIETIEEDDL 340 (443)
T ss_pred HHhcCCCCCEEEEc--ccccCCCccEEEEEcH-HHHhhc---cCCCCCCCCCCCH-------HHHHHHHHHHHHHHHcCH
Confidence 22233 3888876 8755556788877654 443321 1222333333222 234688889999888899
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy10210 409 VWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 409 ~~~~~~~~~~~~~~~~~l 426 (435)
.+++++..+.+.+.++++
T Consensus 341 ~~~~~~~g~~l~~~L~~l 358 (443)
T PRK06058 341 VARARQIEALMTDRLRAL 358 (443)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999998888888765
No 290
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.63 E-value=2.6e-14 Score=145.13 Aligned_cols=267 Identities=12% Similarity=0.102 Sum_probs=168.6
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC--CCCceEEcCCh
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG--PETCGCMTSGG 202 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~--~~~~~~~t~gg 202 (435)
++..|.+...+++.. +++|++.+++.+++.+....+.. ....+...++.+.+++++... ....++++++|
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sG 111 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-----DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSG 111 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-----ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCH
Confidence 444555444333333 35899999999998763222211 123456677788888887532 12235557999
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCccc--------c
Q psy10210 203 TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYTV--------D 261 (435)
Q Consensus 203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~~--------d 261 (435)
+||+..|++.++.... +++|+....+|++....+... | ..+..+|....... +
T Consensus 112 sEA~e~AlklAr~~tg------r~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (442)
T TIGR00709 112 ADAVEAAIKLAKTYTG------RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAG 185 (442)
T ss_pred HHHHHHHHHHHHHhcC------CCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhH
Confidence 9999999999987632 456888888888865444432 2 11333443211111 1
Q ss_pred ----HHHHHHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC
Q psy10210 262 ----LAALQSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP 327 (435)
Q Consensus 262 ----~~~l~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~ 327 (435)
.+.+++.+. +++.++++....+..|.+ +.+++|.++|++||+++|.||++.||... | .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt-----G---~ 257 (442)
T TIGR00709 186 SNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS-----G---T 257 (442)
T ss_pred HHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC-----C---c
Confidence 122344442 357888888877767766 67999999999999999999999987431 2 1
Q ss_pred CCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210 328 PFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF 405 (435)
Q Consensus 328 ~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~ 405 (435)
.+.+...| .|+++++ |.+.+...+|+++.+++ +. . + .+...+++|+ | +..+.+++.++++.+.+
T Consensus 258 ~~a~~~~gv~PDiv~~g--K~l~~G~Pigav~~~~~-~~-~-~--~~~~~~~T~~-----g--npla~aaa~a~L~~i~~ 323 (442)
T TIGR00709 258 MFAFEHAGIEPDFVVMS--KAVGGGLPLAVLLIAPE-FD-A-W--QPAGHTGTFR-----G--NQLAMVTGTEALNYWKD 323 (442)
T ss_pred hhHHHHcCCCCcEEEEc--ccccCCcccEEEEEchH-Hh-c-c--CCCcCCCCCC-----c--CHHHHHHHHHHHHHHHh
Confidence 23322233 3888865 86555567899787655 32 1 1 1112222222 2 22334678889999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q psy10210 406 EAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 406 ~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+++.+++++..+.+.+.++++.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~ 345 (442)
T TIGR00709 324 DNLAQNAQERGERITSFLDDMI 345 (442)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999888887653
No 291
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1e-14 Score=147.49 Aligned_cols=279 Identities=12% Similarity=0.039 Sum_probs=173.0
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...+++.. +++|++.+++.+++.+..+.... ....+...++.+.+++++...- +.+.++++|+|
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse 113 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFA-----GFTHEPAERLAQRLVALTPGGL-DHVFFSDSGSV 113 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHH
Confidence 445555543333222 24899999999998864322110 1123556677888888874222 47999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC--ccccHHHHHHH
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS--YTVDLAALQSA 268 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~--~~~d~~~l~~~ 268 (435)
|+..|++.++..... +|. .+++|+....+|++....+... +- .+..+|...+ ...+++++++.
T Consensus 114 A~e~A~klar~~~~~-~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 192 (423)
T PRK05964 114 AVEVALKMALQYWRN-RGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL 192 (423)
T ss_pred HHHHHHHHHHHHHHh-cCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence 999999999876543 342 3567998888888855443322 10 1233443211 11237888888
Q ss_pred hh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccE
Q psy10210 269 IT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTS 338 (435)
Q Consensus 269 i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~ 338 (435)
+. +++.+|++.. .+...|.. +.+++|.++|++||+++|+||++.|+.. .| ..+.+... .+|+
T Consensus 193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~G---~~~a~~~~~v~pDi 264 (423)
T PRK05964 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGR-----TG---TLFACEQAGVSPDI 264 (423)
T ss_pred HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---chhHHHhcCCCCCe
Confidence 85 3567787776 46667765 5699999999999999999999987633 12 12221222 3477
Q ss_pred EEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210 339 ISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF 417 (435)
Q Consensus 339 ~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~ 417 (435)
++++ |.+.++ .++|+++. ++++.+.... ...+. ....+.+..+ +...++++.++++.+..+++.++++++.+
T Consensus 265 ~~~~--K~l~gG~~p~~av~~-~~~i~~~~~~-~~~~~-~~~~~~T~~~--np~~~aaa~a~l~~l~~~~~~~~~~~~g~ 337 (423)
T PRK05964 265 MCLS--KGLTGGYLPLAATLC-TAEIFEAFYS-DDRAK-AFMHSPSYTA--NPLACAAANASLDLFEDEPVLERVAALSA 337 (423)
T ss_pred eeee--hhhhcCcccceEEEE-cHHHHHhhhc-CCccc-ccccCCCCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 7665 986555 57888555 4555433110 00010 0001112222 22334677788888877889999999999
Q ss_pred HHHHHHHhcCC
Q psy10210 418 NYKSCLQNLSD 428 (435)
Q Consensus 418 ~~~~~~~~l~~ 428 (435)
.+.+.++++.+
T Consensus 338 ~l~~~l~~l~~ 348 (423)
T PRK05964 338 GLAEGLEPFRD 348 (423)
T ss_pred HHHHHHHhhcc
Confidence 98888876643
No 292
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.63 E-value=3.6e-14 Score=145.58 Aligned_cols=266 Identities=15% Similarity=0.077 Sum_probs=166.0
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
+++|++.+++.+++.+......+ +....+...++.+.+++++...+.+.++++++|+||+..|++.++..... +|
T Consensus 105 h~hp~v~~Av~~ql~~~~~~~~~----~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~-~g 179 (504)
T PLN02760 105 GSEPRLVAAATEQLNKLPFYHSF----WNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNA-LG 179 (504)
T ss_pred CCCHHHHHHHHHHHhhccceecc----cccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHh-cC
Confidence 34899999999999874332111 12234566777778887763222247899999999999999999866432 34
Q ss_pred C-CCCeEEEeCCCchhHHH-HHHHcCCE------------EEEEecCCCcc-------------ccHHHHHHHhh----c
Q psy10210 223 I-SLPEIVLPTTAHPAFDK-AANYFGMK------------VKHIRLTSSYT-------------VDLAALQSAIT----G 271 (435)
Q Consensus 223 ~-~~~~viv~~~~~~~~~~-~~~~~g~~------------v~~vp~~~~~~-------------~d~~~l~~~i~----~ 271 (435)
. .+++||..+..|++... +....|.. +..+|.+..+. ...+++++.+. +
T Consensus 180 ~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~ 259 (504)
T PLN02760 180 RPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPE 259 (504)
T ss_pred CCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 2 25678888877777433 32323321 22333211111 11245676663 3
Q ss_pred CceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210 272 NTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK 345 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK 345 (435)
++.+|+++......|.+.+ +++|.++|++||+++|+||++.||-. .| ..+.+...| .|+++++ |
T Consensus 260 ~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGR-----tG---~~~a~e~~gv~PDivtlg--K 329 (504)
T PLN02760 260 TIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGR-----LG---TMFGCDKYNIKPDLVSLA--K 329 (504)
T ss_pred ceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcc-----cc---hhhHHHhcCCCCcEEEec--c
Confidence 5778888887777787755 99999999999999999999988732 12 223333333 4877775 8
Q ss_pred CCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210 346 YGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 346 ~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~ 424 (435)
.+.+. .++|.++.+ +++.+.... .....+....+.|..| +..+.+++.++|+.+.++++.++++++.+.+++.++
T Consensus 330 ~lggG~~PigAv~~~-~~i~d~~~~-~~~~~~~~~h~~T~~g--nPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~ 405 (504)
T PLN02760 330 ALSSAYMPIGAVLVS-PEISDVIHS-QSNKLGSFAHGFTYSG--HPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIK 405 (504)
T ss_pred cccCCccccceEeec-HHHHhhhhc-ccccccCcccCCCCCC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 75443 256776665 444432110 0000000001122223 334457888999999888999999999999998887
Q ss_pred hcC
Q psy10210 425 NLS 427 (435)
Q Consensus 425 ~l~ 427 (435)
++.
T Consensus 406 ~l~ 408 (504)
T PLN02760 406 AFS 408 (504)
T ss_pred HHh
Confidence 763
No 293
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.63 E-value=3e-14 Score=142.88 Aligned_cols=213 Identities=16% Similarity=0.133 Sum_probs=151.4
Q ss_pred ccccccCC---hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH
Q psy10210 137 VSGAVYYY---QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY 213 (435)
Q Consensus 137 ~~~~~~~g---~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~ 213 (435)
++.+.|-| +|+++++..+.+.++..+ ...+....+......++.+.+|+++|.+ ..++.++|..|+..++.++
T Consensus 107 FsSndYLGL~~~p~v~~a~~~ai~~yG~g-~~gSrl~~G~~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~~~i~aL 182 (476)
T PLN02955 107 FSGNDYLGLSSHPTISNAAANAAKEYGMG-PKGSALICGYTTYHRLLESSLADLKKKE---DCLVCPTGFAANMAAMVAI 182 (476)
T ss_pred eeccCccCCCCCHHHHHHHHHHHHHcCCC-CCCcCccccChHHHHHHHHHHHHHHCCC---cEEEECChHHHHHHHHHHH
Confidence 44555555 899999999999886533 3334455667778888889999999875 3578888899999999887
Q ss_pred HHHhhh----hc-C-CCCCeEEEeCCCchhHHHHHHHc----CCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeC
Q psy10210 214 RDYARE----EK-G-ISLPEIVLPTTAHPAFDKAANYF----GMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSM 280 (435)
Q Consensus 214 ~~~~~~----~~-g-~~~~~viv~~~~~~~~~~~~~~~----g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~ 280 (435)
..-... .+ . -++..|+...-.|.+....++.. ++++..++. -|+++|++++.. +.++|++..
T Consensus 183 ~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~H-----ND~~~Le~~L~~~~~~~~~Vv~Eg 257 (476)
T PLN02955 183 GSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRH-----CDMYHLNSLLSSCKMKRKVVVTDS 257 (476)
T ss_pred hhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCC-----CCHHHHHHHHHhCCCCceEEEEeC
Confidence 311100 00 0 01234777777999999999887 567777663 378888888753 457888888
Q ss_pred CCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEe
Q psy10210 281 PNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYR 359 (435)
Q Consensus 281 p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~ 359 (435)
..++.|.+.|+++|.++|++||+.+++||+|+.+++ +..|.+... +.. .+.+|+++.++.|.. |..| |+++.
T Consensus 258 V~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~---G~~G~G~~e~~g~-~~di~ii~~TLsKA~-G~~G-Gfi~g- 330 (476)
T PLN02955 258 LFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC---GENGGGVAEEFNC-EADVDLCVGTLSKAA-GCHG-GFIAC- 330 (476)
T ss_pred CCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee---cCCCCcHHHHhCC-CCCCcEEEEeCccch-hccC-ceeec-
Confidence 889999999999999999999999999999998876 222333221 222 246799999999994 4443 55444
Q ss_pred CCcccc
Q psy10210 360 DLKYKH 365 (435)
Q Consensus 360 ~~~~~~ 365 (435)
++++.+
T Consensus 331 s~~~~~ 336 (476)
T PLN02955 331 SKKWKQ 336 (476)
T ss_pred HHHHHH
Confidence 444443
No 294
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.63 E-value=4.9e-14 Score=141.82 Aligned_cols=249 Identities=15% Similarity=0.049 Sum_probs=152.3
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+....... ...+...++.+.++++.+. +.++++++|++|+..|++.++.....+.+.
T Consensus 57 ~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~~~---~~~~~~~sGseA~e~a~klar~~~~~~~~~ 127 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHISNV------FTNEPALRLAKKLIDATFA---ERVFFANSGAEANEAAFKLARRYACDRHGP 127 (403)
T ss_pred CCHHHHHHHHHHHHhcCcccCc------cCCHHHHHHHHHHHhhCCC---CEEEEeCchHHHHHHHHHHHHHHHhhcCCC
Confidence 5899999999988763222110 1123345677777777643 378999999999999999887664332233
Q ss_pred CCCeEEEeCCCchhHHH-HHHHcC------------CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc--
Q psy10210 224 SLPEIVLPTTAHPAFDK-AANYFG------------MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-- 288 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~-~~~~~g------------~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-- 288 (435)
.+..|+..+.+|++... +....+ .+++.+|. -|++++++.+.+++++|+++ |.||+|.+
T Consensus 128 ~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~aaiiie-p~~~~gg~~~ 201 (403)
T PRK05093 128 EKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAAVKAVIDDHTCAVVVE-PIQGEGGVIP 201 (403)
T ss_pred CCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----CCHHHHHHHhcCCeEEEEEe-cccCCCCCcc
Confidence 45668877777776432 222211 12233332 27899999998889899888 55666543
Q ss_pred ---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccc
Q psy10210 289 ---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKH 365 (435)
Q Consensus 289 ---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~ 365 (435)
+.+++|.++|++||+++|+||+|+++.. .|... .........|+.++ .|...+...+|+++.++ ++.+
T Consensus 202 ~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~-----~g~~~-~~~~~~~~pdi~s~--sK~l~~G~rig~vv~~~-~i~~ 272 (403)
T PRK05093 202 ATPEFLQGLRELCDQHNALLIFDEVQTGMGR-----TGDLF-AYMHYGVTPDILTS--AKALGGGFPIGAMLTTA-EIAS 272 (403)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCC-----Cccch-hhhhcCCCCCEEEe--cccccCCcceEEEEEcH-HHHh
Confidence 4599999999999999999999997633 12110 11111112465554 58754445689977654 4433
Q ss_pred ccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 366 CQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 366 ~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
... ....+. +..+ +....+++.++++.+..+.+.++.++..+.+.+.++++
T Consensus 273 ~l~---~~~~~~-----t~~~--~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 273 HFK---VGTHGS-----TYGG--NPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred hcC---CCCCCC-----CCCC--CHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 211 111111 1112 22223455566666655667777777777777776654
No 295
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=3e-14 Score=144.42 Aligned_cols=250 Identities=14% Similarity=0.041 Sum_probs=160.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+....+.. ....+...++.+.++++++... +.++++++|+||+..|++.++....
T Consensus 58 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~tg----- 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLIHYTPI-----YGFPVEPLLLAEKLIEIAPGDN-PKVSFGLSGSDANDGAIKFARAYTK----- 126 (443)
T ss_pred CCHHHHHHHHHHHHhccCcccc-----ccCcHHHHHHHHHHHHhCCCCC-CEEEEcCCHHHHHHHHHHHHHHhcC-----
Confidence 4899999999998864322211 1223556778888888875432 3799999999999999999886532
Q ss_pred CCCeEEEeCCCchhHHHH-HHHcCC------------EEEEEecCCCcc------------ccHHHHHHHhh-----cCc
Q psy10210 224 SLPEIVLPTTAHPAFDKA-ANYFGM------------KVKHIRLTSSYT------------VDLAALQSAIT-----GNT 273 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~-~~~~g~------------~v~~vp~~~~~~------------~d~~~l~~~i~-----~~~ 273 (435)
++.|+.-...|++.... ....|. .+..+|...... .+++.+++.+. +++
T Consensus 127 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 205 (443)
T PRK08360 127 -RRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGV 205 (443)
T ss_pred -CCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCe
Confidence 35688887777774322 222221 233444321111 12445666663 468
Q ss_pred eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCC
Q psy10210 274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYG 347 (435)
Q Consensus 274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~ 347 (435)
++|+++..++|+|.+ +.+++|.++|++||+++|+||+|++|.. .|. .+..... ..|++++ .|.+
T Consensus 206 AAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr-----~G~---~~a~~~~~~~pDiitl--sK~l 275 (443)
T PRK08360 206 AALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGR-----TGK---WFAIEHFGVEPDIITL--GKPL 275 (443)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Ccc---chhhhhcCCCCCEEEe--cccc
Confidence 899999888999987 3499999999999999999999998633 121 1111111 2377766 5875
Q ss_pred CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+...+|+++.+ +++.+.. .....+ .+..+ +....+++.++++.+..+++.+++++..+++++.++++
T Consensus 276 ~~G~pigav~~~-~~i~~~~---~~~~~~-----~T~~~--~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 343 (443)
T PRK08360 276 GGGLPISATIGR-AEIMDSL---PPLAHA-----FTLSG--NPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEM 343 (443)
T ss_pred cCCceeEEEEEc-HHHHhhh---cCCCCC-----CCCCc--CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 444557886665 4444331 111111 12222 22334678888888888888999999988888777655
No 296
>PRK07481 hypothetical protein; Provisional
Probab=99.62 E-value=3.4e-14 Score=144.40 Aligned_cols=261 Identities=15% Similarity=0.076 Sum_probs=165.9
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+.... .....+.+.++.+.++++++.+..+.++++++|+||+..|++.++..... +|.
T Consensus 59 ~~p~v~~Ai~~ql~~~~~~~~~----~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~-~g~ 133 (449)
T PRK07481 59 NREEVKEAIVRQLDELEYYSTF----DGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKV-RGQ 133 (449)
T ss_pred CCHHHHHHHHHHHHhccceecc----cccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHh-cCC
Confidence 4899999999998864322111 01123556777888888874222247999999999999999999876533 343
Q ss_pred -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC----cc-ccHHH--------HHHHhh----cC
Q psy10210 224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS----YT-VDLAA--------LQSAIT----GN 272 (435)
Q Consensus 224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~----~~-~d~~~--------l~~~i~----~~ 272 (435)
.+.+|+....+|++....+... +- .+..+|.+.. +. -|+++ +++.+. ++
T Consensus 134 ~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~ 213 (449)
T PRK07481 134 PERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDT 213 (449)
T ss_pred CCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 2567888888888855433221 11 1223332211 11 13333 344443 46
Q ss_pred ceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210 273 TVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY 346 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~ 346 (435)
+.+|+++......|.+ +.++++.++|++||+++|.||++.||-. .| ..+.+...| .|+++++ |.
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv~~g--Kg 283 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGR-----TG---SWFGSRGWGVKPDIMCLA--KG 283 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc-----Cc---hhhHhhhcCCCCCEEEEe--ec
Confidence 7899999887767776 4599999999999999999999998733 12 122233334 4888886 76
Q ss_pred CCcc-CCcEEEEEeCCcccccccccc----CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210 347 GFTP-KGSSVVLYRDLKYKHCQYFVT----SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS 421 (435)
Q Consensus 347 ~~~p-~g~g~il~~~~~~~~~~~~~~----~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~ 421 (435)
+.+. .++|+++.+++ +.+...... ....+++|+ | +....+++.++++.+.++++.+++++..+++.+
T Consensus 284 l~gG~~Pi~av~~~~~-i~~~~~~~~~~~~~~~h~~T~~-----g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~ 355 (449)
T PRK07481 284 ITSGYVPLGATMVNAR-IADAFEANADFGGAIMHGYTYS-----G--HPVACAAALATLDIVVREDLPANAAKRGAYLLE 355 (449)
T ss_pred ccCCCcCceEEEEcHH-HHHHHhccCccccccccCCCCC-----C--CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 5444 35788777653 332210000 011223322 2 222347888999999999999999999999888
Q ss_pred HHHhcC
Q psy10210 422 CLQNLS 427 (435)
Q Consensus 422 ~~~~l~ 427 (435)
.++++.
T Consensus 356 ~L~~l~ 361 (449)
T PRK07481 356 GLQPLK 361 (449)
T ss_pred HHHHHh
Confidence 887654
No 297
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.62 E-value=8.9e-14 Score=139.89 Aligned_cols=251 Identities=18% Similarity=0.066 Sum_probs=163.5
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++.+++.+.+.+.....+ . ...+...++.+.++++++. +.++++++|++|+..+++.++.....++|+
T Consensus 54 ~~p~v~~a~~~~~~~~~~~~~---~---~~~~~~~~l~~~l~~~~~~---~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~ 124 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLSSR---A---FYNDVFGEFAEYVTKLFGY---DKVLPMNTGAEAVETAIKLARKWGYKVKGI 124 (401)
T ss_pred CCHHHHHHHHHHHHhcccccc---c---cCCHHHHHHHHHHHhhcCC---CEEEEeCccHHHHHHHHHHHHHHhhhhcCC
Confidence 489999999999876432221 1 1234456667777787764 278999999999999999998775443343
Q ss_pred --CCCeEEEeCCCchhH-HHHHHHcCC------------EEEEEecCCCccccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210 224 --SLPEIVLPTTAHPAF-DKAANYFGM------------KVKHIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPNFPY 285 (435)
Q Consensus 224 --~~~~viv~~~~~~~~-~~~~~~~g~------------~v~~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~npt 285 (435)
.++.|+..+.+|++. ..+....+- .+..+|. .|++++++++. +++.+|+++.+++++
T Consensus 125 ~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~avi~E~v~~~~ 199 (401)
T TIGR01885 125 PENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLEALEEALEDHGPNVCAFIVEPIQGEA 199 (401)
T ss_pred CCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHHHHHHHHHhcCCCEEEEEEeCccCCC
Confidence 256688888787753 333333221 2233332 26888988885 467888899999999
Q ss_pred ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeC
Q psy10210 286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRD 360 (435)
Q Consensus 286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~ 360 (435)
|.+.+ +++|.++|++||+++++||+|.++.. .|... .++......|+++++ |.+.++ ..+|+++.+
T Consensus 200 G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~-----~G~~~-~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~- 270 (401)
T TIGR01885 200 GVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGR-----TGKLL-CVDHENVKPDIVLLG--KALSGGVYPVSAVLAD- 270 (401)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cchhh-HHhhcCCCCCEEEee--ccccCCCCCcEEEEEc-
Confidence 99854 99999999999999999999977532 12110 111112245877766 875433 456775554
Q ss_pred CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 361 LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 361 ~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+++.+... ....+ .+..+ +....+++.++++.+..+++.++.+++.+.+++.++++.
T Consensus 271 ~~i~~~~~---~~~~~-----~t~~~--~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~ 327 (401)
T TIGR01885 271 DDVMLTIK---PGEHG-----STYGG--NPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP 327 (401)
T ss_pred HHHHhhcc---CCCCC-----CCCCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc
Confidence 55543311 11111 12222 233345777888888777888888888888888887763
No 298
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.62 E-value=7.2e-15 Score=138.90 Aligned_cols=254 Identities=16% Similarity=0.142 Sum_probs=161.2
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
.|++++++.+.-.. ....+.. . +.-.++.+.+++++|. ..++|+.+||+++.+++.+.+.++..
T Consensus 13 ~~~m~eam~~a~~~--~~~~YG~--D----~~~~~~e~~~ae~~g~---~a~~Fv~sGT~aN~lal~~~~~~~~~----- 76 (342)
T COG2008 13 TPEMREALAAANAV--GDDVYGE--D----PTTNALEQRIAELFGK---EAALFVPSGTQANQLALAAHCQPGES----- 76 (342)
T ss_pred CHHHHHHHHhcccc--CCCCCCC--C----HHHHHHHHHHHHHhCC---ceEEEecCccHHHHHHHHHhcCCCCe-----
Confidence 67888887754321 1112221 2 3344455677888877 37899999999999999999988877
Q ss_pred CCeEEEeCCCchhHHHH--HHHcC-CEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCcccc---cCHH
Q psy10210 225 LPEIVLPTTAHPAFDKA--ANYFG-MKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPYGTM---DDIG 292 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~--~~~~g-~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~---~~i~ 292 (435)
|++...+|...... .+.++ ...+.+.-.++|.+++++++..+.. .+.+++..+.+|..|++ +.++
T Consensus 77 ---vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~ 153 (342)
T COG2008 77 ---VICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELE 153 (342)
T ss_pred ---EEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHH
Confidence 99999999885543 34443 3333333347899999999998763 24455555555577988 7889
Q ss_pred HHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccC
Q psy10210 293 AIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS 372 (435)
Q Consensus 293 ~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~ 372 (435)
+|.++|++||++||+|.+--.-...+. | ++..-...++|++++++.|.|++|. |.|++.+.++.+...+...
T Consensus 154 ~i~~~~k~~~l~LHmDGAR~~nA~val---g---~~~~~~~~~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a~~~rK 225 (342)
T COG2008 154 AISAVCKEHGLPLHMDGARLANALVAL---G---VALKTIKSYVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRARRWRK 225 (342)
T ss_pred HHHHHHHHhCCceeechHHHHHHHHHc---C---CCHHHHHhhCCEEEEecccCCccee--eeEEEcCHHHHHHHHHHHH
Confidence 999999999999999998654444332 2 2333345689999999999976665 4468888877665333222
Q ss_pred CCCCCCCCCCccccCCCchHHHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHhcCCcccccC
Q psy10210 373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG-FEAQVWICVRYHFNYKSCLQNLSDLWLYLP 434 (435)
Q Consensus 373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g~~~~~~~~~~~~~~~~~~l~~l~~~~p 434 (435)
. .||. -|-...++++|.....-+ .-....+...+...+.+.++..+++....|
T Consensus 226 ~-~Ggl--------~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~ 279 (342)
T COG2008 226 R-AGGL--------MRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFP 279 (342)
T ss_pred H-hccc--------HhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccC
Confidence 2 2322 233334455554432221 122223333345555555665556665544
No 299
>PRK06062 hypothetical protein; Provisional
Probab=99.62 E-value=5.5e-14 Score=142.85 Aligned_cols=268 Identities=17% Similarity=0.071 Sum_probs=169.6
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+++.. +++|++.+++.+.+.+....++ ....+...++.+.++++...+- +.++++++|+
T Consensus 50 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~------~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 122 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP------AHANDARSEAARLIAERAPGDL-SKVFFTNGGA 122 (451)
T ss_pred CCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC------ccCCHHHHHHHHHHHHhCCCCC-CEEEEcCChH
Confidence 3445555544443332 3489999999999887433221 1234556677778888874322 4899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-----------EEEEEecCCCcc------cc----
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-----------KVKHIRLTSSYT------VD---- 261 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-----------~v~~vp~~~~~~------~d---- 261 (435)
||+..|++.++.... +++|+....+|++....+... +. .+..+|....+. -|
T Consensus 123 EAve~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (451)
T PRK06062 123 DANEHAVRMARLHTG------RPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEEC 196 (451)
T ss_pred HHHHHHHHHHHHhhC------CceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHH
Confidence 999999999886532 456888888888855443322 21 122332221111 12
Q ss_pred ---HHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 262 ---LAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 262 ---~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
++++++.+. +++.+|++.......|.+.+ +++|.++|++||+++|+||+++||-. .| ..+.
T Consensus 197 ~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR-----tG---~~~a 268 (451)
T PRK06062 197 ERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGR-----TG---KWFA 268 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCc-----Cc---HHHH
Confidence 577788775 35788888887776787755 99999999999999999999998632 12 1222
Q ss_pred CCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHH
Q psy10210 331 FSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEA 407 (435)
Q Consensus 331 ~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g 407 (435)
+...| .|+++++ |.+.+. .++|.++.++ ++.+... ......+++| .|. ....+++.++++.+..++
T Consensus 269 ~~~~gv~PDi~t~g--K~lggG~~Pigav~~~~-~i~~~~~-~~~~~~~~T~-----~gn--pl~~Aaa~a~L~~l~~~~ 337 (451)
T PRK06062 269 IEHFGVVPDLITFA--KGVNSGYVPLGGVAISE-AIAATFA-DRPYPGGLTY-----SGH--PLACAAAVATINAMEEEG 337 (451)
T ss_pred HHhcCCCCCeeeec--hhhhcCCcCcEEEEEcH-HHHHHhc-cCCCCCCCCC-----CCC--HHHHHHHHHHHHHHHhcC
Confidence 22223 4877765 875554 2577877765 4543211 0111122233 232 334578889999998888
Q ss_pred HHHHHHHHH-HHHHHHHHhc
Q psy10210 408 QVWICVRYH-FNYKSCLQNL 426 (435)
Q Consensus 408 ~~~~~~~~~-~~~~~~~~~l 426 (435)
+.+++++.. +++++.++.+
T Consensus 338 l~~~~~~~G~~~l~~~L~~l 357 (451)
T PRK06062 338 IVENAARIGAEVLGPGLREL 357 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999998887 4666666554
No 300
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.62 E-value=3.4e-14 Score=144.72 Aligned_cols=277 Identities=14% Similarity=0.075 Sum_probs=176.7
Q ss_pred CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+.+. -+++|++.+++.+++.+..+.... ....+.+.++.+.+++++.... +.++++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 126 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-----GLANVPSILLAEKLIEVVPEGL-KKVFYSDSGA 126 (460)
T ss_pred CCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 345555554433322 235999999999999874322211 1224556778888888874322 3899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc-----------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY----------- 258 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~----------- 258 (435)
||+..|++.++..... +|. .+++|+....+|++....+... |- .+..+|....+
T Consensus 127 eAve~AlklAr~~~~~-~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 205 (460)
T PRK06916 127 TAVEIAIKMAFQYWQN-KGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI 205 (460)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999999999876533 343 3567888888888855443322 21 12334322100
Q ss_pred -cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 259 -TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 259 -~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
.-+++++++.+. +++.+|++.. .....|.+ +.++++.++|++||+++|.||++.||-. .| ..+
T Consensus 206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GR-----tG---~~~ 277 (460)
T PRK06916 206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGR-----TG---KMF 277 (460)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCc-----Cc---hhh
Confidence 023566777775 4678888887 46666766 6799999999999999999999988622 12 233
Q ss_pred CCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccc----cCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 330 DFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV----TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 330 d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~----~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
.+...| .|+++++ |.+.+. .++|+++.++ ++.+....- ...+.+++| .| +....+++.++++.
T Consensus 278 a~~~~gv~PDiv~~g--K~l~gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~l~~ 347 (460)
T PRK06916 278 ACEHENVTPDIMTAG--KGLTGGYLPIAITVTTD-EIYNAFYGDYEEQKTFFHGHSY-----TG--NPLGCAVALANLEL 347 (460)
T ss_pred HHHhcCCCCCeeeee--hhhhcCccccceeeecH-HHHHHhhccccccCccccCCCC-----CC--CHHHHHHHHHHHHH
Confidence 333334 4888775 764444 3678867665 433221000 011122232 22 23334788889999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+..+++.++++++.+++.+.++++.+
T Consensus 348 l~~~~l~~~~~~~g~~l~~~l~~l~~ 373 (460)
T PRK06916 348 YEKTNLIEQVARKTEYVATQLEDLFA 373 (460)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHhhc
Confidence 98889999999999999988887643
No 301
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.61 E-value=5.1e-14 Score=143.43 Aligned_cols=276 Identities=13% Similarity=0.027 Sum_probs=176.3
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+++.. +++|++.+++.+++.+..+.... ....+...++.+.+++++.... +.++++++|+
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 117 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA-----GFSHEPVIELSERLVKITPPGL-SRCFYADNGS 117 (466)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 3445555444333222 24899999999998874322211 1234566778888888774222 4899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc-----------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY----------- 258 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~----------- 258 (435)
||+..|++.++..... +|. .+++|+....+|++....+... |. .+..+|....+
T Consensus 118 EAve~AlKlAr~~~~~-~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (466)
T PRK07030 118 SAIEVALKMSFHYWRN-RGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH 196 (466)
T ss_pred HHHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence 9999999999876543 342 3567888888888855443322 21 12333322111
Q ss_pred -cccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 259 -TVDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 259 -~~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
.-+++++++.+. +++.+|+++. .+...|.+ +.+++|.++|++||+++|.||++.||-. ....+
T Consensus 197 ~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGR--------tG~~~ 268 (466)
T PRK07030 197 SRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGR--------TGTMF 268 (466)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCc--------cccch
Confidence 013566777775 4678888887 46656765 6699999999999999999999998732 12233
Q ss_pred CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccc----cCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV----TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~----~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
.+...|+ |+++++ |.+.+. ..+|.++.++ ++.+..... .....+++|+..+ .+.+++.++++.
T Consensus 269 a~~~~gv~PDiv~~g--Kgl~gG~~Pi~av~~~~-ei~~~~~~~~~~~~~~~h~~T~~gnp-------la~aaa~a~L~~ 338 (466)
T PRK07030 269 ACEQAGIRPDFLCLS--KALTGGYLPLAAVLTTD-TVYQAFYDDYPTLRAFLHSHSYTGNP-------LACAAALATLDI 338 (466)
T ss_pred HHHhcCCCCCEEeee--hhccCCcccceEEEecH-HHHHHHhcccccccccccCCCCCCCH-------HHHHHHHHHHHH
Confidence 3333344 888886 765555 3678866654 443221000 0112333333222 234788899999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+.++++.++++++.+++++.++++.
T Consensus 339 i~~~~l~~~~~~~G~~l~~~L~~l~ 363 (466)
T PRK07030 339 FEQDNVIENNRALARRMAEATAHLA 363 (466)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998888764
No 302
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.61 E-value=6.5e-14 Score=141.95 Aligned_cols=279 Identities=16% Similarity=0.121 Sum_probs=172.7
Q ss_pred CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...+.++ -+++|++.+++.+.+++..+...+ ....+.+.++.+.+++++...- +.+.++++|+|
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-----~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGse 117 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF-----QMGHPKAFELANRIAEIAPGGL-NHVFFTNSGSE 117 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC-----CcCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHH
Confidence 34455544333222 235899999999998864333221 1123555678888888874222 37999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cC------------CEEEEEecCCC-----ccc-----
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FG------------MKVKHIRLTSS-----YTV----- 260 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g------------~~v~~vp~~~~-----~~~----- 260 (435)
|+..|++.++..... +|. .+++||....+|++....+.. .| ..+..+|...+ +..
T Consensus 118 A~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 118 SVDTALKIALAYHRA-RGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHh-cCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 999999999876432 332 256799888888885433221 11 12333443211 100
Q ss_pred ---cHHHHHHHhh----cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 261 ---DLAALQSAIT----GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 261 ---d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
..+++++++. +++.+|+++......|.+.+ +++|.++|++||+++|+||++.||-. .| ..+
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Gr-----tG---~~~ 268 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGR-----LG---APF 268 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC-----Cc---cch
Confidence 2457777774 45778888888777788855 99999999999999999999987632 12 223
Q ss_pred CCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210 330 DFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406 (435)
Q Consensus 330 d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~ 406 (435)
.+...|+ |+++++ |.+.+. ..+|.++.++ ++.+.. ...+......+.+.+..+ +....+++.++++.+..+
T Consensus 269 a~~~~gv~PDivt~g--K~l~gG~~P~gav~~~~-~i~~~~-~~~~~~~~~~~~~~T~~g--~pl~~aaa~a~L~~l~~~ 342 (442)
T PRK13360 269 AAQYFGVTPDLLTCA--KGLTNGAIPMGAVFVSS-EIHDAF-MQGPEAGIEFFHGYTYSG--HPLACAAALATLDLYERE 342 (442)
T ss_pred hhhhcCCCCceeeee--eccccCccceEEEEEcH-HHHHHh-hcCCccccccccCCCCCC--CHHHHHHHHHHHHHHHhC
Confidence 3333343 777665 865433 3467766654 433221 001100000001122333 333457888899999888
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy10210 407 AQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~l~ 427 (435)
++.++++++.+++++.++++.
T Consensus 343 ~l~~~~~~~g~~l~~~l~~l~ 363 (442)
T PRK13360 343 GLLTRAARLAPYWEDALHSLR 363 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999888887654
No 303
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.61 E-value=3.1e-14 Score=142.03 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=152.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+..... .....+++.++.+++++..+. +.++++++|++|+..|++.++....
T Consensus 46 ~~p~v~~a~~~~~~~~~~~~------~~~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~~~~g----- 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWHVS------NLFTNSLQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLARKHTG----- 111 (377)
T ss_pred CCHHHHHHHHHHHHhccccc------cccCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHHHhcC-----
Confidence 58999999999987632211 112346777777777776643 3789999999999999997654321
Q ss_pred CCCeEEEeCCCchhHH-HHHHHcCCEEE---EEecCCC--c--cccHHHHHHHhhcCceEEEEeCCCCCcccc----cCH
Q psy10210 224 SLPEIVLPTTAHPAFD-KAANYFGMKVK---HIRLTSS--Y--TVDLAALQSAITGNTVMLVGSMPNFPYGTM----DDI 291 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~-~~~~~~g~~v~---~vp~~~~--~--~~d~~~l~~~i~~~~~~v~~~~p~nptG~~----~~i 291 (435)
+++|++.++.|++.. ......+.... ..|..++ . .-|++++++.+.+++++|+++.++++.|.. +++
T Consensus 112 -~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~~~~~l 190 (377)
T PRK02936 112 -KSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIPADPAFL 190 (377)
T ss_pred -CCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCccCCHHHH
Confidence 235888888877533 22322222110 1111110 0 127899999998889999999999988876 459
Q ss_pred HHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210 292 GAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF 369 (435)
Q Consensus 292 ~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~ 369 (435)
++|.++|++||+++|+||+|.++... |. ++.+...+ .|+++ +.|.+.+...+|+++. ++++.+..
T Consensus 191 ~~l~~l~~~~~~~lI~DEv~~g~g~~-----g~---~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~-~~~~~~~~-- 257 (377)
T PRK02936 191 QEVQTLCKKFGALLIIDEVQTGIGRT-----GT---LFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIG-KKELGTAF-- 257 (377)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcC-----ch---hhHHHhhCCCCcEEE--EcccccCCCccEEEEE-cHHHHhhc--
Confidence 99999999999999999999876331 21 11111112 36554 5688544345788554 45554331
Q ss_pred ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
....... +.. -+....+++.++++.+..+.+.+++++..+.+.+.+++
T Consensus 258 -~~~~~~~-----t~~--~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 305 (377)
T PRK02936 258 -GPGSHGS-----TFG--GNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQE 305 (377)
T ss_pred -cCCCCCC-----CCC--CCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 1111111 111 12233456667777765556667777777766666654
No 304
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.61 E-value=5.9e-14 Score=128.25 Aligned_cols=222 Identities=15% Similarity=0.139 Sum_probs=144.7
Q ss_pred CccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHH
Q psy10210 101 LEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEV 180 (435)
Q Consensus 101 ~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 180 (435)
+.+..+.|..-+--++..+.+...+... ..+.+....|...+|...+.+++++.+++....|
T Consensus 33 imLggGNPa~iPem~~~f~~~~aemla~-~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwn----------------- 94 (417)
T COG3977 33 IMLGGGNPARIPEMDDYFQDLLAEMLAS-GKATEALCNYDGPQGKAVLIDALAKMLRREYGWN----------------- 94 (417)
T ss_pred eeeCCCCcccChhHHHHHHHHHHHHHhc-chHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCC-----------------
Confidence 4455566765333344444443322221 1233456667777888888899888888765443
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEE------EEEec
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKV------KHIRL 254 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v------~~vp~ 254 (435)
..+ .++.+|+|++.+.+.+...+..+. ..|..+..++--.|.|.+|..+.-.-.+-| ..+|-
T Consensus 95 ---------it~-~NIalTnGSQs~fFYlfNlF~G~~--sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~ 162 (417)
T COG3977 95 ---------ITA-QNIALTNGSQSAFFYLFNLFAGRR--SDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPA 162 (417)
T ss_pred ---------Ccc-ceeeecCCccchHHHHHHHhcCcc--CCCcceeEeeccChhhccccccccCccceeeccCCcccccc
Confidence 123 489999999999999888764322 234334445555788888765533222211 11111
Q ss_pred C-CCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 255 T-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 255 ~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
. -.+++|.+++. +.+.+.+|+++-|+||||.+ +++.+|.++|++||+++++|.+|+- +.|.+-
T Consensus 163 g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-----------PFP~ii 229 (417)
T COG3977 163 GQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-----------PFPGII 229 (417)
T ss_pred cceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-----------CCCcee
Confidence 1 13578888775 45789999999999999999 7899999999999999999999963 222333
Q ss_pred CCCC-----CccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 331 FSLP-----GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 331 ~~~~-----gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
|++. .--+.++|.+|.|+....+|+ ++.++++.+.
T Consensus 230 fsd~~~~w~~NiilC~SLSK~GLPG~R~GI-iIane~viqa 269 (417)
T COG3977 230 FSDATPLWNENIILCMSLSKLGLPGSRCGI-IIANEKVIQA 269 (417)
T ss_pred cccccccCCCCEEEEeehhhcCCCCcceeE-EEccHHHHHH
Confidence 3321 125778899999877788999 4555555543
No 305
>PRK06917 hypothetical protein; Provisional
Probab=99.61 E-value=5.4e-14 Score=142.73 Aligned_cols=275 Identities=15% Similarity=0.067 Sum_probs=172.1
Q ss_pred CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...+++. -+++|++.+++.+++.+..+... .....+...++.+.+++++.... +.++++++|||
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsE 102 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-----SQFTSEPAEKLAKKLSDLSPGDL-NWSFFVNSGSE 102 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-----cccCCHHHHHHHHHHHHhCCCCC-CEEEEeCChHH
Confidence 44455544333222 23489999999999887422211 11224566778888888875432 37999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCcc-----------
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYT----------- 259 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~----------- 259 (435)
|++.|++.++..... +|. .+++|+....+|++....+.. .+. .+..+|......
T Consensus 103 Ave~AlklAr~~~~~-rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (447)
T PRK06917 103 ANETAMKIAIQHFQE-RGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181 (447)
T ss_pred HHHHHHHHHHHHHHh-cCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence 999999999876543 443 356788888888885544322 221 112232211000
Q ss_pred -ccHHHHHHHhh----cCceEEEEeCCCCCcc-cc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 260 -VDLAALQSAIT----GNTVMLVGSMPNFPYG-TM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 260 -~d~~~l~~~i~----~~~~~v~~~~p~nptG-~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
-+++.+++.++ +++.+|+++......| .+ +.+++|.++|++||+++|+||++.||-. .| ..+
T Consensus 182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGR-----tG---~~~ 253 (447)
T PRK06917 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGR-----TG---AMF 253 (447)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCc-----cc---chh
Confidence 13456777775 3578888887655333 44 6699999999999999999999988632 12 223
Q ss_pred CCCCCC--ccEEEecCCCCCCccC-CcEEEEEeCCcccccccccc-CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210 330 DFSLPG--VTSISVDTHKYGFTPK-GSSVVLYRDLKYKHCQYFVT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF 405 (435)
Q Consensus 330 d~~~~g--vd~~~~s~hK~~~~p~-g~g~il~~~~~~~~~~~~~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~ 405 (435)
.+...| .|+++++ |.+.+.. ++|+++.++ ++.+...... ..+.+++|+ | +...++++.++++.+.+
T Consensus 254 a~~~~gv~PDi~~~g--K~l~~G~~Pi~a~~~~~-~i~~~~~~~~~~~~~~~T~~-----g--npl~~aaa~a~l~~l~~ 323 (447)
T PRK06917 254 AMEHWGVEPDIMTLG--KGLGAGYTPIAATVVSD-RVMEPILRGSRSIMSGHTLS-----A--NPLSAATALAVLEYMEK 323 (447)
T ss_pred hHHhcCCCCCEEEee--ehhccCCcceEEEEEcH-HHHHHHhccCcccccccCCC-----C--CHHHHHHHHHHHHHHHH
Confidence 222333 4887775 8755543 577767664 4433211000 111233322 2 22334788899999988
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q psy10210 406 EAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 406 ~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+++.+++++..+++.+.++++.
T Consensus 324 ~~l~~~~~~~g~~l~~~L~~l~ 345 (447)
T PRK06917 324 HNLPEKAAEKGEYLIKGLQKVQ 345 (447)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999888887764
No 306
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.61 E-value=7.3e-14 Score=140.64 Aligned_cols=266 Identities=13% Similarity=0.075 Sum_probs=165.7
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC--CCCceEE-cCC
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG--PETCGCM-TSG 201 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~--~~~~~~~-t~g 201 (435)
++..|.+...++++. +++|++.+++.+.+.+...... .....+...++.+.+++++..+ ....+.+ +++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-----~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 107 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS-----LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT 107 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceec-----cccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence 344454443333333 3589999999999875322211 1122455667777777765222 1124555 589
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc---cccHHHH
Q psy10210 202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY---TVDLAAL 265 (435)
Q Consensus 202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~---~~d~~~l 265 (435)
|+||+..|++.++.... +++|+....+|++....+... |. .+..+|.+... .-+++.+
T Consensus 108 GseA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 181 (412)
T TIGR02407 108 GTNAVESALKLARKVTG------RSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYF 181 (412)
T ss_pred chHHHHHHHHHHhhhcC------CCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHH
Confidence 99999999999986532 456888888888865443322 21 23344432100 1246778
Q ss_pred HHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC-
Q psy10210 266 QSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP- 334 (435)
Q Consensus 266 ~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~- 334 (435)
++.+. +++.+|++....++.|.+ +.+++|.++|++||+++|+||+++||-. .| ..+.+...
T Consensus 182 ~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GR-----tG---~~~a~~~~~ 253 (412)
T TIGR02407 182 EKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGR-----TG---TFFSFEPAG 253 (412)
T ss_pred HHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cc---hhHHhcccC
Confidence 88885 356888888888888875 6799999999999999999999987732 12 11122112
Q ss_pred -CccEEEecCCCCCCc-cCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH-hcHHHHHHH
Q psy10210 335 -GVTSISVDTHKYGFT-PKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY-FGFEAQVWI 411 (435)
Q Consensus 335 -gvd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~-~g~~g~~~~ 411 (435)
..|+++++ |++.+ ...+|+++.+++ + .. + .+...+++| .+ +....+++.+++.. +..+++.++
T Consensus 254 v~PDi~~~~--K~lg~~G~pigav~~~~~-~-~~-~--~~~~~~~T~-----~g--npl~~aaa~a~l~~~i~~~~l~~~ 319 (412)
T TIGR02407 254 IEPDIVCLS--KSISGYGLPLALTLIKPE-L-DV-W--KPGEHNGTF-----RG--NNLAFVTATAALEYYWSDDAFEKA 319 (412)
T ss_pred CCCCEEEec--hhccCCccceeEEEEchh-h-hc-c--CCCccCCCC-----Cc--cHHHHHHHHHHHHHHhcccHHHHH
Confidence 34777765 98544 456899877654 3 21 1 112222222 12 22233566788885 777889999
Q ss_pred HHHHHHHHHHHHHhc
Q psy10210 412 CVRYHFNYKSCLQNL 426 (435)
Q Consensus 412 ~~~~~~~~~~~~~~l 426 (435)
++++.+.+++.++.+
T Consensus 320 ~~~~g~~l~~~l~~l 334 (412)
T TIGR02407 320 VQRKSEIIQERLDRI 334 (412)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888888777653
No 307
>PRK07678 aminotransferase; Validated
Probab=99.61 E-value=7.3e-14 Score=142.04 Aligned_cols=272 Identities=15% Similarity=0.080 Sum_probs=171.8
Q ss_pred CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...+++. -+++|++.+++.+++.+...... ....+...++.+.++++++.. ..++++++|+
T Consensus 44 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~------~~~~~~~~~lae~l~~~~~~~--~~v~f~~sGs 115 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL------TQSHEPAIKLAEKLNEWLGGE--YVIFFSNSGS 115 (451)
T ss_pred CCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc------ccCCHHHHHHHHHHHHhCCCC--CEEEEeCCcH
Confidence 344555554433222 23489999999999886432211 112345667888888887543 3799999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccc---------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTV--------- 260 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~--------- 260 (435)
||++.|++.++..... +|. .+++|+....+|++....+... |. .+..+|.......
T Consensus 116 eA~e~AlklAr~~t~~-~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 116 EANETAFKIARQYHAQ-KGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 9999999999876543 343 3567888888888855443322 11 2233433211111
Q ss_pred c---HHHHHHHhh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCC
Q psy10210 261 D---LAALQSAIT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 261 d---~~~l~~~i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
| ++.+++.+. +++.+|+++......|.+ +.++++.++|++||+++|+||++.||-. .| ..+
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~ 266 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGR-----TG---KAF 266 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCc-----Cc---hhH
Confidence 1 233566664 467889888877666766 4599999999999999999999988733 12 122
Q ss_pred CCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210 330 DFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF 403 (435)
Q Consensus 330 d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~ 403 (435)
.+...| .|+++++ |.+.+. .++|.++.+++ +.+...... ..+.+++|+. +....+++.++++.+
T Consensus 267 ~~~~~gv~PDivt~g--K~lggG~~Pi~av~~~~~-i~~~~~~~~~~~~~~h~~T~~g-------np~~~aaa~a~l~~l 336 (451)
T PRK07678 267 GFMNYGVKPDIITMA--KGITSAYLPLSATAVKKE-IYEAFKGKGEYEHFRHVNTFGG-------NPAACALALKNLEIM 336 (451)
T ss_pred HHHhcCCCCCEEEee--cccccCCcceeEEEEcHH-HHHHHhccCcccccccCCCCCc-------CHHHHHHHHHHHHHH
Confidence 222234 4888875 865444 46788777654 332210000 0122333322 223447888999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHh
Q psy10210 404 GFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 404 g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
.++++.+++++..+++++.+++
T Consensus 337 ~~~~~~~~~~~~g~~l~~~l~~ 358 (451)
T PRK07678 337 ENENLIERSAQLGELLLEQLKE 358 (451)
T ss_pred HhCCHHHHHHHHHHHHHHHHHH
Confidence 8889999999998888877754
No 308
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=7.1e-14 Score=132.99 Aligned_cols=227 Identities=15% Similarity=0.112 Sum_probs=160.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHcC-
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYFG- 246 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~g- 246 (435)
..+-++|..+++...++||++.. ++-.. +|+.|+..+..++.+++|+ |+-.+-.|.++..- ....|
T Consensus 68 e~VD~vE~laierak~LFga~~a-nVQPh-SGs~AN~av~~All~pGDt--------imgm~l~~GGHltHg~~v~~sG~ 137 (413)
T COG0112 68 EYVDEVEELAIERAKKLFGAEYA-NVQPH-SGSQANQAVYLALLQPGDT--------IMGLDLSHGGHLTHGSPVNFSGK 137 (413)
T ss_pred eeHHHHHHHHHHHHHHHhCCCcc-ccCCC-CchHHHHHHHHHHcCCCCe--------EecccCCCCCcccCCCCCCccce
Confidence 45668888888899999999765 55544 5589999999999999998 77666655543222 22223
Q ss_pred -CEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccC
Q psy10210 247 -MKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAG 323 (435)
Q Consensus 247 -~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g 323 (435)
.+.+..|+| +++.+|.|++++.+.+ ++++|+.-.-.+| ..-|++++.++|++.|.++.+|.+|-.++.. .|
T Consensus 138 ~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~id~~~~reIad~VGA~L~~DmAHiaGLVA----~G 211 (413)
T COG0112 138 LFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPIDFKRFREIADEVGAYLMVDMAHVAGLIA----GG 211 (413)
T ss_pred eEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc--cccCHHHHHHHHHHhCceEEehHHHHHHHHh----cc
Confidence 356677788 7799999999998764 7888876543332 3479999999999999999999999777663 23
Q ss_pred CCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc-ccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 324 YPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF-VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 324 ~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~-~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
.-..|+. .+|+++.++||++.||.| |+|+++++++.+.... ..|.++|| .--..+|+...++..
T Consensus 212 ~~p~P~~----~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~aVFPg~qgg----------pl~HviAakaVa~~E 276 (413)
T COG0112 212 VHPNPLP----HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSAVFPGLQGG----------PLMHVIAAKAVAFKE 276 (413)
T ss_pred cCCCCCC----ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhhcCCccCCC----------hHHHHHHHHHHHHHH
Confidence 2222333 389999999999999987 8889888676554322 33444433 222345555556666
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
....+|++..+++.++++.+.+.|.+
T Consensus 277 al~p~fk~Ya~qVv~NAkaLAe~l~~ 302 (413)
T COG0112 277 ALEPEFKEYAKQVVKNAKALAEALKE 302 (413)
T ss_pred HcChhHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777777777777777666543
No 309
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=6.6e-14 Score=142.61 Aligned_cols=276 Identities=12% Similarity=0.001 Sum_probs=174.3
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC----CCCceEEcC
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG----PETCGCMTS 200 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~----~~~~~~~t~ 200 (435)
++..|.+...+.+.. +++|++.+++.++.++....... ....+...++.+.+++++... .-+.+++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~ 136 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-----GFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYAD 136 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-----ccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeC
Confidence 444555443333332 34899999999988753322111 112345667778888877431 124899999
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCcc-------
Q psy10210 201 GGTESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYT------- 259 (435)
Q Consensus 201 ggteai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~------- 259 (435)
+|+||+..|++.++..... +|. .+.+||....+|++....+... +. .+..+|....+.
T Consensus 137 sGSEAvE~AlKlAr~~~~~-~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 215 (472)
T PRK08742 137 NGSAGVEVALKMAFHYFHN-RGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred CchHHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence 9999999999999887544 343 3567998888888855443322 11 123344321111
Q ss_pred -----ccHHHHHHHhh---cCceEEEEeC-CCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 260 -----VDLAALQSAIT---GNTVMLVGSM-PNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 260 -----~d~~~l~~~i~---~~~~~v~~~~-p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
.+++.+++.+. +++.+|+++. .....|.+ +.++++.++|++||+++|.||++.||-. ..
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGR--------tG 287 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGR--------TG 287 (472)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCC--------Cc
Confidence 13566777774 4677888877 46656765 6799999999999999999999998733 22
Q ss_pred CCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHH
Q psy10210 327 PPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAM 400 (435)
Q Consensus 327 ~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l 400 (435)
..+.+...|+ |+++++ |.+.+. .++|.++.+++ +.+...... ....+++| .| ...+.+++.+++
T Consensus 288 ~~~a~e~~gv~PDiv~~g--Kgl~gG~~Plaav~~~~e-i~~~~~~~~~~~~~~h~~T~-----~g--npl~~Aaa~a~L 357 (472)
T PRK08742 288 TLFACEQAGVMPDLLCLS--KGLTGGFLPLSAVLATQQ-LYDAFLDDSRERAFLHSHSY-----TG--NPLACAAALATL 357 (472)
T ss_pred cchHHHhcCCCCCEEEEc--ccccCCCCCcceeeccHH-HHHHhhccCccCccCcCCCC-----Cc--cHHHHHHHHHHH
Confidence 2333433444 888886 875554 36788676654 332210000 01122222 22 223347888999
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 401 MYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 401 ~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+.+.++++.+++++..++++.+++.+.
T Consensus 358 ~~i~~~~l~~~~~~~g~~l~~~~~~~~ 384 (472)
T PRK08742 358 DIFADDDVIARNQPTAARMTQLAAQIG 384 (472)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998887776654
No 310
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=9.5e-14 Score=140.14 Aligned_cols=269 Identities=15% Similarity=0.049 Sum_probs=167.6
Q ss_pred CCCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...+++ .-+++|++.+++.+.+.+..+... .....+...++.+.+++++.....+.++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-----~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGs 111 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-----QVVPYENYVRLAERLNALVPGDFAKKTIFVTTGA 111 (425)
T ss_pred CCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-----CccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 34455544433322 223589999999999886432211 1122345566777888877533224799999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C-------------CEEEEEecCCCc-cc----cHHH
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G-------------MKVKHIRLTSSY-TV----DLAA 264 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g-------------~~v~~vp~~~~~-~~----d~~~ 264 (435)
||+..|++.++.... +++|+....+|++....+... | ..+..+|.+.+. .. ++++
T Consensus 112 eA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 185 (425)
T PRK07495 112 EAVENAVKIARAATG------RSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAA 185 (425)
T ss_pred HHHHHHHHHHHHhhC------CCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHH
Confidence 999999999886522 456888888888854333221 1 123445543211 12 2455
Q ss_pred HHHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 265 LQSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 265 l~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
+++.+. +++++|+++.....+|.+ +.+++|.++|++||+++|+||+++||.. .| ..+.+...|
T Consensus 186 l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-----~G---~~~a~~~~g 257 (425)
T PRK07495 186 LDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR-----TG---KLFAMEHHE 257 (425)
T ss_pred HHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc-----CC---CceeecccC
Confidence 677664 357788888666557754 5699999999999999999999987633 12 122232233
Q ss_pred --ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH
Q psy10210 336 --VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV 413 (435)
Q Consensus 336 --vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~ 413 (435)
.|+++++ |.+.+...+|+++.++ ++.+.. .+...+++| .+ +....+++.++++.+..+++.++++
T Consensus 258 v~pDi~tls--K~l~~G~pigav~~~~-~i~~~~---~~~~~~~T~-----~~--~pl~~aaa~a~l~~l~~~~l~~~~~ 324 (425)
T PRK07495 258 VAADLTTMA--KGLAGGFPLAAVTGRA-EIMDAP---GPGGLGGTY-----GG--NPLGIAAAHAVLDVIEEEDLCERAN 324 (425)
T ss_pred CCCCEEeeh--hhhcCCccceEEEEcH-HHHhcc---CCCCcCCCC-----CC--CHHHHHHHHHHHHHHHhchHHHHHH
Confidence 3666664 8755556678867654 443321 111222222 22 2223466778899998888999999
Q ss_pred HHHHHHHHHHHhcC
Q psy10210 414 RYHFNYKSCLQNLS 427 (435)
Q Consensus 414 ~~~~~~~~~~~~l~ 427 (435)
+..+++++.++.+.
T Consensus 325 ~~g~~l~~~L~~l~ 338 (425)
T PRK07495 325 QLGNRLKQRLASLR 338 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 99998888777653
No 311
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.60 E-value=2e-14 Score=142.15 Aligned_cols=209 Identities=22% Similarity=0.181 Sum_probs=141.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH----HcC
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN----YFG 246 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~----~~g 246 (435)
|....+| +.++++.|+ +.++++++|..|+..++.++..+++. |+++...|.+....++ .+|
T Consensus 55 Pt~~~le----~~la~Le~g---~~a~~~~SGmaAi~~~l~~ll~~Gd~--------iv~~~~~Y~~t~~~~~~~l~~~g 119 (386)
T PF01053_consen 55 PTVRALE----QRLAALEGG---EDALLFSSGMAAISAALLALLKPGDH--------IVASDDLYGGTYRLLEELLPRFG 119 (386)
T ss_dssp HHHHHHH----HHHHHHHT----SEEEEESSHHHHHHHHHHHHS-TTBE--------EEEESSSSHHHHHHHHHCHHHTT
T ss_pred ccHHHHH----HHHHHhhcc---cceeeccchHHHHHHHHHhhcccCCc--------eEecCCccCcchhhhhhhhcccC
Confidence 4444444 355666766 25788899999999999999888877 9999999999665554 469
Q ss_pred CEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC-CcEEEeccccchhhhcccccCCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~ 325 (435)
+++..++. -|+++++++++++|++|++..|+||+..+.|+++|+++|+++| ++++||..++..+.
T Consensus 120 v~v~~~d~-----~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~--------- 185 (386)
T PF01053_consen 120 VEVTFVDP-----TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN--------- 185 (386)
T ss_dssp SEEEEEST-----TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT---------
T ss_pred cEEEEeCc-----hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee---------
Confidence 99988864 3799999999999999999999999999999999999999998 99999999865422
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeC-CccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHH
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRD-LKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMY 402 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~-~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~ 402 (435)
++....|+|++..|..||..|... .|+++.++ +++.+...... ...|. -. ....+|..++
T Consensus 186 ---~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-~~~G~----------~~--~p~da~ll~r- 248 (386)
T PF01053_consen 186 ---QNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-RLLGA----------TL--SPFDAWLLLR- 248 (386)
T ss_dssp ---C-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-HHHT-----------B----HHHHHHHHH-
T ss_pred ---eccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-hhcCc----------cc--hHHHHHHHhc-
Confidence 222344899999999999654432 46766665 34433211111 11111 11 1135665554
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 403 FGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 403 ~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
|...+.-|+++..+.+.+..+.|
T Consensus 249 -gl~Tl~~R~~~~~~nA~~lA~~L 271 (386)
T PF01053_consen 249 -GLRTLPLRMERQNENAEALAEFL 271 (386)
T ss_dssp -HHTTHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHH
Confidence 55666667776666665554444
No 312
>PRK07483 hypothetical protein; Provisional
Probab=99.60 E-value=9.8e-14 Score=140.67 Aligned_cols=257 Identities=14% Similarity=0.085 Sum_probs=164.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC-
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG- 222 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g- 222 (435)
++|++.+++.+.+.+..+.+... ...+...++.+.+++++.... +.++++++|+||+..|++.++..... +|
T Consensus 47 ~~p~v~~av~~ql~~~~~~~~~~-----~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGsEAve~AlklAr~~~~~-~g~ 119 (443)
T PRK07483 47 SHPRVIAAIHAQIDRLAYAHTSF-----FTTEPAEALADRLVAAAPAGL-EHVYFVSGGSEAVEAALKLARQYFVE-IGQ 119 (443)
T ss_pred CCHHHHHHHHHHHHhccCccccc-----cCCHHHHHHHHHHHHhCCCCC-CEEEEcCCcHHHHHHHHHHHHHHHHh-cCC
Confidence 48999999999988643222211 123455677778888774222 38999999999999999999877543 34
Q ss_pred CCCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCccc-------------cHHHHHHHhh----cC
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSYTV-------------DLAALQSAIT----GN 272 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~~~-------------d~~~l~~~i~----~~ 272 (435)
..+++|+....+|++....+... |- .+..+|....+.. .++++++++. ++
T Consensus 120 ~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 199 (443)
T PRK07483 120 PQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDT 199 (443)
T ss_pred CCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCc
Confidence 23567888888888854333221 11 1223332111110 1356666564 46
Q ss_pred ceEEEEeCCCCC-cccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210 273 TVMLVGSMPNFP-YGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK 345 (435)
Q Consensus 273 ~~~v~~~~p~np-tG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK 345 (435)
+.+|++...... .|.+ +.++++.++|++||+++|.||++.||-. ....+.+...| .|+++++ |
T Consensus 200 iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGR--------tG~~~a~~~~gv~PDiv~~g--K 269 (443)
T PRK07483 200 VAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR--------TGTLFACEEDGVAPDLVTIA--K 269 (443)
T ss_pred eEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCccc--------CcHHHHHhhcCCCCCeeeeh--h
Confidence 788888877642 3655 4599999999999999999999998833 12233333333 4888876 7
Q ss_pred CCCccC-CcEEEEEeCCccccccccccCC--CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q psy10210 346 YGFTPK-GSSVVLYRDLKYKHCQYFVTSD--WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSC 422 (435)
Q Consensus 346 ~~~~p~-g~g~il~~~~~~~~~~~~~~~~--~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~ 422 (435)
.+.+.. ++|.++.+++ +.+... ..+. ..+++|+..+ .+.+++.++++.+.++++.+++++..+++++.
T Consensus 270 ~l~gG~~Pi~av~~~~~-i~~~~~-~~~~~~~h~~T~~gnp-------l~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~ 340 (443)
T PRK07483 270 GLGAGYQPIGAVLASDR-IYDAIA-DGSGFFQHGHTYLGHA-------TACAAALAVQRVIAEDGLLANVRARGEQLRAR 340 (443)
T ss_pred hhccCccccEEEEEcHH-HHHHHh-cCCCccccCCCCCCCH-------HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 655553 6788777654 332210 0111 1233332222 23468889999999999999999999998888
Q ss_pred HHhc
Q psy10210 423 LQNL 426 (435)
Q Consensus 423 ~~~l 426 (435)
++++
T Consensus 341 L~~l 344 (443)
T PRK07483 341 LRER 344 (443)
T ss_pred HHHH
Confidence 8754
No 313
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.60 E-value=2.8e-14 Score=140.23 Aligned_cols=228 Identities=14% Similarity=0.111 Sum_probs=144.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCce--EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH---HHHH---
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCG--CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF---DKAA--- 242 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~--~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~---~~~~--- 242 (435)
..+.++|.-+++.+.++||+++..+. +=..+|+.|+..++.++.+++|+ |+..+..+.++ ....
T Consensus 62 ~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~--------Im~l~l~~GGHlshg~~~~~~ 133 (399)
T PF00464_consen 62 EYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDT--------IMGLSLPHGGHLSHGSSVNFK 133 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-E--------EEEEEGGGT--GGGT-TTSHS
T ss_pred chhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCc--------EEecChhhccccccccccccc
Confidence 34567778888899999999855322 33368899999999999999998 87777654432 2221
Q ss_pred ----HHcCCEEEEEecC-CCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210 243 ----NYFGMKVKHIRLT-SSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLA 316 (435)
Q Consensus 243 ----~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~ 316 (435)
.-...+.+.+++| +++.+|.+++++.+.+ ++++|++..-++| ...|++++.++|++.|.++++|.+|-.++.
T Consensus 134 ~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLI 211 (399)
T PF00464_consen 134 KISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLI 211 (399)
T ss_dssp BSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHH
T ss_pred ccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccce
Confidence 2234578888998 7899999999998864 8899988766554 346899999999999999999999988776
Q ss_pred hcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEe-------------CCccccccc-cccCCCCCCCCCCC
Q psy10210 317 PFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYR-------------DLKYKHCQY-FVTSDWPGGNYGSP 382 (435)
Q Consensus 317 ~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~-------------~~~~~~~~~-~~~~~~~gg~~~~~ 382 (435)
. .|.-..|++ .+|+++.++||.+.||.| |+|+++ ++++.+..- ...|.
T Consensus 212 a----~g~~~~P~~----~ADvvt~sThKtl~GPrg-giI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~--------- 273 (399)
T PF00464_consen 212 A----GGLFPNPFP----YADVVTGSTHKTLRGPRG-GIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPG--------- 273 (399)
T ss_dssp H----TTSS--GCC----TSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTT---------
T ss_pred e----hheecCccc----cceEEEeeccccccccCc-eEEEEcCCccccCCcccccHHHHHHHhccccCCC---------
Confidence 4 232223443 389999999999889886 888888 233333211 11222
Q ss_pred ccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 383 SVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 383 ~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
+.|+.-...+++...+++......+.+..+++.++++.+.+.|.
T Consensus 274 -~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~ 317 (399)
T PF00464_consen 274 -LQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQ 317 (399)
T ss_dssp -T-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334444555665666666556667777777777776666554
No 314
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=8.4e-14 Score=141.32 Aligned_cols=250 Identities=15% Similarity=0.015 Sum_probs=159.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+....... ....+.+.++.+.++++++... +.++++++|+||+..|++.++....
T Consensus 60 ~~p~v~~a~~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGseA~e~AlklAr~~tg----- 128 (433)
T PRK08117 60 RHPKVVQAIKEQADKLMHGPSG-----VIYYESILKLAEELAEITPGGL-DCFFFSNSGAEAIEGALKLAKHVTK----- 128 (433)
T ss_pred CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCcHHHHHHHHHHHHHHhcC-----
Confidence 5899999999998764322111 0123556777788888874222 4799999999999999998876532
Q ss_pred CCCeEEEeCCCchhHHHHHH-HcC-------------CEEEEEecCCCcc------------ccHHHHHHHhh-----cC
Q psy10210 224 SLPEIVLPTTAHPAFDKAAN-YFG-------------MKVKHIRLTSSYT------------VDLAALQSAIT-----GN 272 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~-~~g-------------~~v~~vp~~~~~~------------~d~~~l~~~i~-----~~ 272 (435)
+++|+..+..|++....+. ..+ ..+..+|....+. -|++++++.+. ++
T Consensus 129 -r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 207 (433)
T PRK08117 129 -RPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEE 207 (433)
T ss_pred -CCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCc
Confidence 3568888887777443322 111 0123444321111 15666777664 35
Q ss_pred ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210 273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY 346 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~ 346 (435)
+.+|+++......|.+.+ +++|.++|++||+++|+||+|+||.. .|. .+.....| .|++ ++.|.
T Consensus 208 ~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr-----~G~---~~~~~~~gv~pDi~--t~sK~ 277 (433)
T PRK08117 208 VAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGR-----TGE---WFAAQTFGVVPDIM--TIAKG 277 (433)
T ss_pred EEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCc-----ccc---chhHhhcCCCCCEe--ehhhh
Confidence 778888888777788855 99999999999999999999998633 122 22212223 3665 44587
Q ss_pred CCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 347 GFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 347 ~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.+...+|+++.++ ++.+.. .....+++ ..+ +....+++.++++.+..+++.+++++..+.+++.++.+
T Consensus 278 lg~G~pigav~~~~-~i~~~~---~~~~~~~T-----~~~--np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 278 IASGLPLSAVVASK-ELMEQW---PLGSHGTT-----FGG--NPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVL 346 (433)
T ss_pred ccCCCcceeEEEcH-HHHhhc---cCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 55445678866654 443321 11112222 222 33345678888888877888888888888888777665
No 315
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.60 E-value=5.6e-13 Score=141.88 Aligned_cols=320 Identities=15% Similarity=0.139 Sum_probs=200.5
Q ss_pred hhhchhhHHHHHHHHHHHH----HHHH-hhhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCCcccccccC
Q psy10210 69 ARKIPAVRKKLEEETGKVA----KLFQ-DDIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHGRVSGAVYY 143 (435)
Q Consensus 69 ~~~lp~~~~~i~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (435)
.|++-...+.+++||+.+. +++. +.++.... ..-..++|+. .++.++++.+++...++.. + ..+.+.+.|.
T Consensus 15 ~rh~g~~~~~~~~ML~~iG~~s~d~l~~~~iP~~ir-~~~~l~lp~~-~sE~e~~~~~~~~a~kN~~-~-~~fiG~G~y~ 90 (954)
T PRK12566 15 RRHLGPDAAEQQAMLDALGVASRAELIEQTVPPAIR-LNRPLDLPAA-LDEQAALARLRGYAEQNQV-W-TSLIGMGYHG 90 (954)
T ss_pred hccCCCCHHHHHHHHHhcCccCHHHHhhccCCHHHh-cCCCCCCCCC-CCHHHHHHHHHHHHhcCCC-c-cccccccccC
Confidence 4677667778888888654 4444 23333221 1112466764 8999999999998877643 2 2344444443
Q ss_pred C-hHhHH-HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhc
Q psy10210 144 Y-QQDLV-DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEK 221 (435)
Q Consensus 144 g-~~~l~-~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~ 221 (435)
. .|.+. +.+.+.-+-+....|++++.+++..+...+...++++++|.+-. +-.+-.++|.+-..++.+.+....
T Consensus 91 ~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~va-NASl~D~atA~aEA~~ma~~~~~~--- 166 (954)
T PRK12566 91 TVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLA-NASLLDEATAAAEAMALAKRVAKS--- 166 (954)
T ss_pred CcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhh-hhhhccchhHHHHHHHHHHHHhhc---
Confidence 2 45544 55554322222236999999999999999999999999999754 556777877666644444432111
Q ss_pred CCCCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210 222 GISLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297 (435)
Q Consensus 222 g~~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l 297 (435)
++.+|++++..|+.+....+. .|++++. +++++.+++++.+|++.+|++ .|.++|+++|.++
T Consensus 167 --k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~ 232 (954)
T PRK12566 167 --KSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQ 232 (954)
T ss_pred --CCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHH
Confidence 135699999999997765544 4666654 334445566899999999987 8999999999999
Q ss_pred HHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCC----CccCCcEEEEEeCCccccccccccCC
Q psy10210 298 GEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYG----FTPKGSSVVLYRDLKYKHCQYFVTSD 373 (435)
Q Consensus 298 a~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~----~~p~g~g~il~~~~~~~~~~~~~~~~ 373 (435)
+++.|..+++-.-.-.+ +.-.+| ...|+|+++.+.+-+| +|++..|++.++++ +.+. .|.
T Consensus 233 ~h~~gal~~~~~d~laL--------~ll~~P---ge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~-~~R~----~PG 296 (954)
T PRK12566 233 LHGQQALACVAADLLSL--------LVLTPP---GELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD-YKRA----MPG 296 (954)
T ss_pred HHHcCCEEEEEeCHHHH--------hCCCCh---hhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH-HHhh----CCC
Confidence 99999987643322111 111122 3558999988766553 34455788777764 3322 232
Q ss_pred CCCCCCCCCccccCCCc-----------------------hHHHHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 374 WPGGNYGSPSVSGSRSG-----------------------GIIATCWA--AMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 374 ~~gg~~~~~~~~gsr~~-----------------------~~ia~~~a--~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
..-|. +....|.|.. .++.+..+ .+.++|.+|+++..+++...+..+.+.|.+
T Consensus 297 RivG~--s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~ 374 (954)
T PRK12566 297 RIIGV--SRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA 374 (954)
T ss_pred Cccce--eecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22221 1111121111 11212222 245679999999988888777666665554
No 316
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.60 E-value=1.7e-14 Score=143.06 Aligned_cols=160 Identities=18% Similarity=0.157 Sum_probs=118.6
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh----HHHHHHHc
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA----FDKAANYF 245 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~----~~~~~~~~ 245 (435)
.|.+.++|+ .++++.|.. ..+.+++|+.|+.+++.++.+++|. |+++...|.. +...+...
T Consensus 63 ~P~~~~lE~----~la~leg~~---~av~~sSG~aAi~~al~all~~GD~--------Vl~~~~~yg~t~~~~~~~~~~~ 127 (384)
T PRK06434 63 NPTVQAFEE----KYAVLENAE---HALSFSSGMGAITSAILSLIKKGKR--------ILSISDLYGQTFYFFNKVLKTL 127 (384)
T ss_pred ChhHHHHHH----HHHHHhCCC---cEEEeCCHHHHHHHHHHHHhCCCCE--------EEEecCccchHHHHHHHHHHhc
Confidence 355566555 466777664 4688888899999999998877776 9998775444 44667778
Q ss_pred CCEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 246 GMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 246 g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
|++++.+++++...++ ++ +++++|++..++||++.+.|+++|.++|++++ +++|++++...
T Consensus 128 Gi~v~fvd~~~~~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~--------- 189 (384)
T PRK06434 128 GIHVDYIDTDRLNSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPY--------- 189 (384)
T ss_pred CcEEEEECCCChhhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcc---------
Confidence 9999999876322222 22 36899999999999999999999999999998 57799975321
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCC--cEEEEEeCCcccc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKG--SSVVLYRDLKYKH 365 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g--~g~il~~~~~~~~ 365 (435)
...|++ .|+|+++.|.||++.|+.+ .|+++.+++++.+
T Consensus 190 ~~~pl~---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~ 229 (384)
T PRK06434 190 NQNPLD---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFN 229 (384)
T ss_pred cCCchh---cCCCEEEeecccccCCCCCceEEEEecCcHHHHH
Confidence 112343 4799999999999777654 4666666666543
No 317
>PRK07480 putative aminotransferase; Validated
Probab=99.59 E-value=9.1e-14 Score=141.33 Aligned_cols=260 Identities=18% Similarity=0.115 Sum_probs=164.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+....+. .+....+...++.+.+++++..+- +.++++++|+||++.|++.++..... +|.
T Consensus 67 ~~p~v~~Ai~~q~~~~~~~~~----~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGseA~e~AlklAr~~~~~-~g~ 140 (456)
T PRK07480 67 GRKELADAAARQMRELPYYNT----FFKTTHPPAIELAAKLAEVAPPGF-NHVFFTNSGSEANDTVLRMVRHYWAL-KGK 140 (456)
T ss_pred CCHHHHHHHHHHHHhcCCccc----ccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHHHHh-cCC
Confidence 489999999999886422211 112234666777888888875332 38999999999999999999876433 342
Q ss_pred -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCCc----ccc--------HHHHHHHhh----cCc
Q psy10210 224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSSY----TVD--------LAALQSAIT----GNT 273 (435)
Q Consensus 224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~~----~~d--------~~~l~~~i~----~~~ 273 (435)
.+++|+....+|++....+... |. .+..+|....+ ..+ ++.+++.+. +++
T Consensus 141 ~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v 220 (456)
T PRK07480 141 PQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNV 220 (456)
T ss_pred CCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcE
Confidence 2567888888888754322221 11 11222211100 001 356665553 467
Q ss_pred eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCC
Q psy10210 274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYG 347 (435)
Q Consensus 274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~ 347 (435)
.+|++...+...|.+ +.+++|.++|++||+++|+||++.||-. .| ..+.+...|+ |+++++ |.+
T Consensus 221 AAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv~~g--K~l 290 (456)
T PRK07480 221 AAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGR-----TG---EWFGSQHFGIKPDLMTIA--KGL 290 (456)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cc---chhhhhhcCCCCCeeeee--hhh
Confidence 888888877766776 4499999999999999999999988732 12 2333333444 787775 864
Q ss_pred Ccc-CCcEEEEEeCCccccccc-cccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHH-HHHHHHHHHHHH
Q psy10210 348 FTP-KGSSVVLYRDLKYKHCQY-FVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWIC-VRYHFNYKSCLQ 424 (435)
Q Consensus 348 ~~p-~g~g~il~~~~~~~~~~~-~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~-~~~~~~~~~~~~ 424 (435)
.+. .++|.++.++ ++.+... .......+++|+.. ....+++.++|+.+.++++.+++ ++..+.+.+.++
T Consensus 291 ~gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~T~~gn-------pl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~ 362 (456)
T PRK07480 291 TSGYIPMGAVGVGD-RVAEVLIEEGGEFNHGFTYSGH-------PVAAAVALANLRILRDEGIVERVRDDTGPYLQKRLR 362 (456)
T ss_pred ccCCccceEEEEcH-HHHHHHhcCCCCcccCCCCCcC-------HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 443 2567767654 4432210 00111233333322 33447888999999888999999 588888888877
Q ss_pred hcC
Q psy10210 425 NLS 427 (435)
Q Consensus 425 ~l~ 427 (435)
++.
T Consensus 363 ~l~ 365 (456)
T PRK07480 363 ELA 365 (456)
T ss_pred Hhh
Confidence 654
No 318
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.59 E-value=6.5e-14 Score=141.51 Aligned_cols=267 Identities=17% Similarity=0.073 Sum_probs=166.6
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...+++.. +++|++.+++.+.+.+....... ....+.+.++.+.+++++.....+.++++++|+|
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~-----~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGse 105 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFM-----VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAE 105 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcccc-----ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHH
Confidence 445555444333232 34899999999998864322111 0122345567777888774322247999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C--------C-----EEEEEecCCCcc-----------
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G--------M-----KVKHIRLTSSYT----------- 259 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g--------~-----~v~~vp~~~~~~----------- 259 (435)
|+..|++.++.... +++|+....+|++....+... + . .+..+|......
T Consensus 106 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (420)
T TIGR00700 106 AVENAVKIARSYTG------RPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTD 179 (420)
T ss_pred HHHHHHHHHHHhcC------CCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHH
Confidence 99999999886532 356888888888854333321 1 0 123343321110
Q ss_pred ccHHHHHHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCC
Q psy10210 260 VDLAALQSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFD 330 (435)
Q Consensus 260 ~d~~~l~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d 330 (435)
-+++.+++.+. +++.+|+++.....+|.+ +.+++|.++|++||+++|+||+|.+|... | ..+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~-----g---~~~a 251 (420)
T TIGR00700 180 GELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART-----G---AMFA 251 (420)
T ss_pred HHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc-----c---hhHH
Confidence 12556776652 467889988887777876 34999999999999999999999987431 2 1122
Q ss_pred CCCC--CccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210 331 FSLP--GVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ 408 (435)
Q Consensus 331 ~~~~--gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~ 408 (435)
+... ..|++++ .|.+.+...+|+++.+ +++.+.. .....+++ ..++ ....+++.++++.+..+++
T Consensus 252 ~~~~~~~pDi~~l--sK~l~~G~pig~v~~~-~~i~~~~---~~~~~~~T-----~~~~--pl~~aaa~a~l~~l~~~~~ 318 (420)
T TIGR00700 252 CEHEGPEPDLITT--AKSLADGLPLSGVTGR-AEIMDAP---APGGLGGT-----YAGN--PLACAAALAVLAIIESEGL 318 (420)
T ss_pred HhhcCCCCCEEEe--eccccCCcceEEEEec-HHHHhhc---CCCCcCCC-----CCcC--HHHHHHHHHHHHHHHhccH
Confidence 2222 2476664 5875555678996665 4444331 11122222 2222 2233567778888888889
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy10210 409 VWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 409 ~~~~~~~~~~~~~~~~~l 426 (435)
.+++++..+.+++.++.+
T Consensus 319 ~~~~~~~g~~l~~~L~~l 336 (420)
T TIGR00700 319 IERARQIGRLVTDRLTTL 336 (420)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999888888777665
No 319
>KOG1402|consensus
Probab=99.59 E-value=8.9e-14 Score=128.60 Aligned_cols=251 Identities=17% Similarity=0.143 Sum_probs=177.0
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|.+.+++.+...+..-+. -........+..+.+.++||.+ .++-++.|.||...+++.+|.++...|+++
T Consensus 77 hpki~~aLqeq~~kLtlss------rafYnd~~~~f~~~vt~lf~~~---kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip 147 (427)
T KOG1402|consen 77 HPKIIKALQEQADKLTLSS------RAFYNDVLGEFAEYVTKLFGYD---KVLPMNTGAEAVETACKLARKWGYRKKNIP 147 (427)
T ss_pred CHHHHHHHHHHHhHhhhhh------HHHhhhhHHHHHHHHHHhcCcc---eeeecccchhHHHHHHHHHHHHHHhhccCC
Confidence 8899999988877532211 1123455667778899999885 578888889999999999999999989987
Q ss_pred CC--eEEEeCCCchhHHHHHHHcCCE--------------EEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCccc
Q psy10210 225 LP--EIVLPTTAHPAFDKAANYFGMK--------------VKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGT 287 (435)
Q Consensus 225 ~~--~viv~~~~~~~~~~~~~~~g~~--------------v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~ 287 (435)
+. .|+....+|++-...+-.++.+ +..||. -|.++++.++++ +.+++++...+...|+
T Consensus 148 ~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~eale~~l~~~~vaaFivEPIQGEaGV 222 (427)
T KOG1402|consen 148 KNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDAEALEVALKSPNVAAFIVEPIQGEAGV 222 (427)
T ss_pred ccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCHHHHHHHhcCCCeeEEEeeccccccce
Confidence 43 3444455555422111111111 222332 278999999875 6788888888888998
Q ss_pred c----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCC-ccCCcEEEEEeCCc
Q psy10210 288 M----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGF-TPKGSSVVLYRDLK 362 (435)
Q Consensus 288 ~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~-~p~g~g~il~~~~~ 362 (435)
+ ..++++.++|++|++++|.||++.|.... |.- --.|...-..|++.+. |.+. |-.+.+.++..+ +
T Consensus 223 vvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT-----Gk~-la~d~env~PDivilg--KalSGG~~Pvsavl~~~-~ 293 (427)
T KOG1402|consen 223 VVPPPGYLKKVRELCTKYNVLLIADEVQTGLART-----GKL-LACDYENVRPDIVILG--KALSGGVYPVSAVLADD-D 293 (427)
T ss_pred EeCCchhHHHHHHHHHhhcEEEEehhhhhccccc-----CcE-EEeehhhcCCCeEEEe--ccccCCeeeeEEEEecH-H
Confidence 8 56999999999999999999999987542 210 0123333334877776 6543 346778866555 4
Q ss_pred cccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 363 YKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 363 ~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
+... +.|.-.|.+|+..++.+ +.+.|++..+.++.+.++++++...++..+.+|+.
T Consensus 294 im~~---~~pgeHgsTyggNpLg~-------~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~ 349 (427)
T KOG1402|consen 294 IMLN---IKPGEHGSTYGGNPLGC-------AVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQK 349 (427)
T ss_pred HHhc---cCCCccccccCCChHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4322 35655777777666655 67889999999999999999999999999888765
No 320
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.59 E-value=6.3e-14 Score=137.43 Aligned_cols=258 Identities=16% Similarity=0.068 Sum_probs=165.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+......+.+. .....+...++.+.+.+.++. ..+.+.++++|+||++.|++.++.........
T Consensus 33 ~~p~i~~ai~~~~~~~~~~~~-----~~~~~~~~~~la~~L~~~~p~-~~~~v~f~~sGseAve~Alkla~~~~~~~~~~ 106 (339)
T PF00202_consen 33 NHPEIAEAIAEQANKLNYVSF-----SGFTHPEAAELAEKLAELFPG-GLDRVFFANSGSEAVEAALKLARQYHNKRAYT 106 (339)
T ss_dssp T-HHHHHHHHHHHHHCSSCST-----TTSEEHHHHHHHHHHHHHSST-TEEEEEEESSHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CccccchhHHHHhhhcccccc-----cceeccchhhhhhhhhhcccc-ccceeeeccCchHHHHHHHHHhhccccccccc
Confidence 489999999998877433221 122345566777788888844 23589999999999999999998332221111
Q ss_pred CCCeEEEeCCCchhHHHHHHH-cC------------CEEEEEecCCCcc-----ccHHHHHH----HhhcCceEEEEeCC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANY-FG------------MKVKHIRLTSSYT-----VDLAALQS----AITGNTVMLVGSMP 281 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~-~g------------~~v~~vp~~~~~~-----~d~~~l~~----~i~~~~~~v~~~~p 281 (435)
.++.|+....+|++....+.. .+ ..+..+|.+.... -..+++++ ...+++.+|+++..
T Consensus 107 ~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi 186 (339)
T PF00202_consen 107 GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPI 186 (339)
T ss_dssp TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESS
T ss_pred CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEecc
Confidence 356799998888873332222 11 1456777653111 01122222 22456789999988
Q ss_pred CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEE
Q psy10210 282 NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSV 355 (435)
Q Consensus 282 ~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~ 355 (435)
....|.+ +.+++|.++|++||+++|+||++.||-. ....+.+...| .|+++++ |.+.+...+|.
T Consensus 187 ~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gR--------tG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sa 256 (339)
T PF00202_consen 187 QGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGR--------TGKFFASEHYGVDPDIVTFG--KGLGGGLPISA 256 (339)
T ss_dssp BTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTT--------TSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEE
T ss_pred ccccCccccccchhhehcccccccccceecccccccccc--------cCCccceecccccCcccccc--cchhhhhhccc
Confidence 7767766 5689999999999999999999998833 22234333333 3999987 77555588899
Q ss_pred EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 356 VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 356 il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
++++++ +.+.. .+.-.+++++.. ....+++.++++.+.++++.+++++..+.+++.++.|..
T Consensus 257 v~~~~~-i~~~~---~~~~~~~T~~g~-------p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~~ 318 (339)
T PF00202_consen 257 VLGSEE-IMEAF---QPGSHGSTFGGN-------PLSCAAALATLEILEEEDLLERVRELGERLREGLRELAA 318 (339)
T ss_dssp EEEEHH-HHTTS---CTTSSTCTTTT--------HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccch-hhccc---cccccccccccc-------hHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 787764 33221 111133332222 233468889999999999999999999988888876653
No 321
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.59 E-value=1.2e-13 Score=140.63 Aligned_cols=268 Identities=14% Similarity=0.134 Sum_probs=169.6
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC--CCceEEc-C
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP--ETCGCMT-S 200 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~--~~~~~~t-~ 200 (435)
.++..|.+...+++.. +++|++.+++.+++.+....... ....+.+.++.+.+++++...- ...++++ +
T Consensus 60 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-----DLTTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred CCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-----ccCCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 3445555543333222 24899999999988642211111 1123445556666777663221 1246564 7
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc--------
Q psy10210 201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT-------- 259 (435)
Q Consensus 201 ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~-------- 259 (435)
+|+||+..|++.++.... +++|+....+|++....+... | -.+..+|.+.+.+
T Consensus 135 SGSEAve~AlklAr~~tg------r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 208 (464)
T PRK06938 135 TGTDAVEAALKLVKTATG------RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGE 208 (464)
T ss_pred CcHHHHHHHHHHHHHhhC------CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 999999999999886522 456888888888855443321 1 0234454432111
Q ss_pred ----ccHHHHHHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 260 ----VDLAALQSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 260 ----~d~~~l~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
.+++.+++.+.+ ++.+|++.......|.+ +.++++.++|++||+++|.||++.||-. .|
T Consensus 209 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGR-----tG-- 281 (464)
T PRK06938 209 AGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGR-----TG-- 281 (464)
T ss_pred hHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----Cc--
Confidence 236778888753 47888888776656765 5699999999999999999999998832 12
Q ss_pred CCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHh
Q psy10210 326 LPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYF 403 (435)
Q Consensus 326 ~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~ 403 (435)
..+.+...|+ |+++++ |.+.+..++|+++.+++ + +. +.+...+++|+.. ..+.+++.++++.+
T Consensus 282 -~~~a~e~~gv~PDiv~~g--KglggG~PlsAv~~~~~-~-~~---~~~~~~~~T~~gn-------pla~Aaa~a~L~~l 346 (464)
T PRK06938 282 -KMFAFEHAGIIPDVVVLS--KAIGGSLPLAVVVYREW-L-DT---WQPGAHAGTFRGN-------QMAMAAGSATLRYI 346 (464)
T ss_pred -HHHHHHhcCCCCCEEEee--ccccCCCceEEEeehhH-h-hc---cCCCCCCCCCCcC-------HHHHHHHHHHHHHH
Confidence 2233333343 888886 76555577888787654 3 21 1222233333322 23347888999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 404 GFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 404 g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
.++++.++++++.+++.+.++++.
T Consensus 347 ~~~~l~~~~~~~G~~l~~~L~~l~ 370 (464)
T PRK06938 347 KEHRLAEHAAAMGERLREHLRQLQ 370 (464)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888887653
No 322
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.59 E-value=7.4e-14 Score=140.70 Aligned_cols=276 Identities=14% Similarity=-0.009 Sum_probs=169.1
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+.+.. +++|++.+++.+++.+..+.... ....+...++.+.++++++.+- +.++++++|+
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 110 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFG-----GLTHEPAIKLTRKLLNLTDNGL-DHVFYSDSGS 110 (422)
T ss_pred CCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccC-----CcCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 3445555443333222 34899999999999874332111 0123455677778888774322 4899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcccc-------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYTVD------- 261 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~~d------- 261 (435)
||++.|++.++..... +|. .+++|+....+|++....+... +- ....+|.......+
T Consensus 111 eA~e~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 189 (422)
T PRK05630 111 VSVEVAIKMALQYSKG-QGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189 (422)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHH
Confidence 9999999999876543 343 3567888888888844333221 11 12334332111111
Q ss_pred HHHHHHHhhcCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 262 LAALQSAITGNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 262 ~~~l~~~i~~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
.+.+++.+.+++.+|+++.. +...|.+ +.+++|.++|++||+++|+||++.|+-. .| ..+.+...|+
T Consensus 190 ~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Gr-----tG---~~~a~~~~gv 261 (422)
T PRK05630 190 LRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGR-----TG---ELFATLAAGV 261 (422)
T ss_pred HHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCc-----Cc---hhhHHHhcCC
Confidence 34556666667888888874 6656665 6799999999999999999999987732 12 2233333343
Q ss_pred --cEEEecCCCCCCcc-CCcEEEEEeCCcccccccccc---CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210 337 --TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVT---SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW 410 (435)
Q Consensus 337 --d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~---~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~ 410 (435)
|+++++ |.+.+. ...|+++.++ ++.+...... ..+.+++|+ | +....+++.++++.+.+++..+
T Consensus 262 ~PDi~t~g--K~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~h~~T~~-----g--~Pla~aaa~aaL~~l~~~~~~~ 331 (422)
T PRK05630 262 TPDIMCVG--KALTGGFMSFAATLCTD-KVAQLISTPNGGGALMHGPTFM-----A--NPLACAVAHASLEIIETGMWRK 331 (422)
T ss_pred CCCeeeee--chhhcCccccceeeccH-HHHHHHhccCCCCccccCCCCc-----C--CHHHHHHHHHHHHHHHhCcHHH
Confidence 788665 875443 3457756654 3332210000 001233332 2 2234467888899998888888
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy10210 411 ICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 411 ~~~~~~~~~~~~~~~l~ 427 (435)
+++++.+++++.++.+.
T Consensus 332 ~~~~~g~~l~~~L~~l~ 348 (422)
T PRK05630 332 QVKRIEAELIAGLSPLA 348 (422)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99998888887776553
No 323
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.59 E-value=9e-14 Score=140.15 Aligned_cols=276 Identities=14% Similarity=0.029 Sum_probs=170.8
Q ss_pred CCCCCCCCCccccc---ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGA---VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~---~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+.+ .-+++|++.+++.+++.+..+.... ....+...++.+.++++++.+- +.++++++|+
T Consensus 40 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~SGs 113 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG-----GITHPPAIELCRKLVAMTPQPL-ECVFLADSGS 113 (428)
T ss_pred CCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCcccc-----ccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 34455554433322 2235899999999998864322110 1123456677778888775322 4899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHH
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLA 263 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~ 263 (435)
||++.|++.++..... +|..+++|+....+|++....+... +- .+..+|.... . .-|++
T Consensus 114 EAve~AlklAr~~~~~-~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~ 192 (428)
T PRK07986 114 VAVEVAMKMALQYWQA-KGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIA 192 (428)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHH
Confidence 9999999999876433 3444677999888888744332221 11 1223332211 0 12567
Q ss_pred HHHHHhh---cCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 264 ALQSAIT---GNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 264 ~l~~~i~---~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
++++.+. +++.+|++... +...|.+ +.+++|.++|++||+++|+||++.||-. .| ..+.+...|
T Consensus 193 ~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~Gr-----tG---~~fa~~~~g 264 (428)
T PRK07986 193 PFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGR-----TG---KLFACEHAG 264 (428)
T ss_pred HHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCcc-----CC---CeeeecccC
Confidence 7888775 35677777764 5545553 5599999999999999999999987622 22 233333334
Q ss_pred c--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccccC-C-CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210 336 V--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTS-D-WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW 410 (435)
Q Consensus 336 v--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~-~-~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~ 410 (435)
+ |++++ .|.+.+. ..+|+++.++ ++.+....... . ..+++| .| +....+++.++++.+.++++.+
T Consensus 265 v~PDi~t~--gK~l~gG~~p~~av~~~~-~i~~~~~~~~~~~~~~~~T~-----~g--~p~~~aaa~a~L~~i~~~~~~~ 334 (428)
T PRK07986 265 IAPDILCL--GKALTGGTMTLSATLTTR-EVAETISNGEAGCFMHGPTF-----MG--NPLACAVANASLSLLESGDWQQ 334 (428)
T ss_pred CCCCEEEe--chhhhCCcccCcchhchH-HHHHHhhcCCCCccccCCCC-----Cc--CHHHHHHHHHHHHHHHhCCHHH
Confidence 3 77765 4765444 3567756554 44332110000 0 122222 22 2344578889999998888999
Q ss_pred HHHHHHHHHHHHHHhcC
Q psy10210 411 ICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 411 ~~~~~~~~~~~~~~~l~ 427 (435)
+++++.+++++.++++.
T Consensus 335 ~~~~~g~~l~~~l~~l~ 351 (428)
T PRK07986 335 QVAAIEAQLREELAPLR 351 (428)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999888887763
No 324
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=1.9e-13 Score=138.78 Aligned_cols=251 Identities=16% Similarity=0.030 Sum_probs=160.4
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+.....+. ....+.+.++.+.+++++.....+.++++++|+||++.|++.++....
T Consensus 59 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tg----- 128 (445)
T PRK08593 59 APPRVVEAIKAQADKFIHYTPA-----YMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG----- 128 (445)
T ss_pred CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhC-----
Confidence 4899999999998864322111 112456677788888887543224799999999999999999876532
Q ss_pred CCCeEEEeCCCchhHHHHHH-HcCC-------------EEEEEecCCCcc-----cc-------HHHHHHHhh-----cC
Q psy10210 224 SLPEIVLPTTAHPAFDKAAN-YFGM-------------KVKHIRLTSSYT-----VD-------LAALQSAIT-----GN 272 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~-~~g~-------------~v~~vp~~~~~~-----~d-------~~~l~~~i~-----~~ 272 (435)
+++|+..+.+|++....+. ..+. .+..+|..+... .+ ++++++.+. ++
T Consensus 129 -r~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (445)
T PRK08593 129 -RPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADE 207 (445)
T ss_pred -CCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCc
Confidence 3468888888887543332 2221 234454321111 11 244555442 46
Q ss_pred ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCC
Q psy10210 273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKY 346 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~ 346 (435)
+++|+++......|.+.+ +++|.++|++||+++|+||++.||-. .|. .+.....| .|+++++ |.
T Consensus 208 iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Gr-----tG~---~~a~~~~gv~pDi~t~g--K~ 277 (445)
T PRK08593 208 VACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGR-----TGK---WSSISHFNITPDLMSFG--KS 277 (445)
T ss_pred eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----Cch---HHHHHhcCCCCCEeeec--cc
Confidence 889999988887787743 99999999999999999999987632 121 12222223 3777655 76
Q ss_pred CCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 347 GFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 347 ~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+.+..++|+++.+ +++.+.. .....+ .+..+ +....+++.++++.+.++++.+++++..+++++.++++
T Consensus 278 l~~G~p~gav~~~-~~i~~~~---~~~~~~-----~T~~~--~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 346 (445)
T PRK08593 278 LAGGMPMSAIVGR-KEIMESL---EAPAHL-----FTTGA--NPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQW 346 (445)
T ss_pred ccCCcccEEEEEc-HHHHhhh---ccCCCC-----CCCCC--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 5444557886665 4443321 111111 12222 22345678889999988889999999988888887765
No 325
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.59 E-value=2.1e-13 Score=138.31 Aligned_cols=263 Identities=15% Similarity=0.111 Sum_probs=165.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+.... ....+...++.+.+++++.... +.++++++|+||+..|++.++..... +|.
T Consensus 66 ~~p~v~~ai~~ql~~l~~~~~~-----~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~-~g~ 138 (445)
T PRK09221 66 GRPEIVEAVARQAATLDYAPAF-----QMGHPLAFELAERLAELAPGGL-DHVFFTNSGSESVDTALKIALAYHRA-RGQ 138 (445)
T ss_pred CCHHHHHHHHHHHHhccCcccc-----ccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHh-cCC
Confidence 5899999999998864332211 1123455667788888874322 47999999999999999999876543 332
Q ss_pred -CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCC-C----cc--------ccHHHHHHHhh----cC
Q psy10210 224 -SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTS-S----YT--------VDLAALQSAIT----GN 272 (435)
Q Consensus 224 -~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~-~----~~--------~d~~~l~~~i~----~~ 272 (435)
.+.+|+....+|++....+... | ..+..+|... . +. ...+++++.+. ++
T Consensus 139 ~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 218 (445)
T PRK09221 139 GTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDAST 218 (445)
T ss_pred CCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCc
Confidence 3567888888888754332221 1 1123343221 0 00 01356777664 46
Q ss_pred ceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCC
Q psy10210 273 TVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKY 346 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~ 346 (435)
+.+|+++......|.+.+ +++|.++|++||+++|+||+++||-. ....+.+...|+ |+++++ |.
T Consensus 219 iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GR--------tG~~~~~~~~gv~PDi~~~g--K~ 288 (445)
T PRK09221 219 IAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGR--------LGAAFAAERFGVTPDIITFA--KG 288 (445)
T ss_pred EEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCc--------CchhhHHHhcCCCCCEEEec--cc
Confidence 788999988887888855 99999999999999999999987632 112333333344 877776 65
Q ss_pred CCcc-CCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 347 GFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 347 ~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
+.+. ..+|.++.++ ++.+.... .+........+.+..+ +...++++.++++.+.++++.++++++.+++++.+++
T Consensus 289 l~gG~~Pi~av~~~~-~i~~~~~~-~~~~~~~~~~~~T~~~--~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~ 364 (445)
T PRK09221 289 LTNGAIPMGAVIASD-EIYDAFMQ-GPEYAIEFFHGYTYSA--HPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHS 364 (445)
T ss_pred cccCcccceeeEEcH-HHHHhhcc-CcccccccccccCCCc--CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 3332 3467766654 44332110 1110000001122222 3333467778999998889999999999999988887
Q ss_pred cC
Q psy10210 426 LS 427 (435)
Q Consensus 426 l~ 427 (435)
+.
T Consensus 365 l~ 366 (445)
T PRK09221 365 LK 366 (445)
T ss_pred hc
Confidence 64
No 326
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=5e-13 Score=135.51 Aligned_cols=249 Identities=16% Similarity=0.060 Sum_probs=160.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+..+.... ....+.+.++.+.+++++..+..+.++++++|+||+..|++.++....
T Consensus 71 ~~p~v~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tg----- 140 (441)
T PRK05769 71 AHPKVVKAVKEQAEKFLHYSLT-----DFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTG----- 140 (441)
T ss_pred CCHHHHHHHHHHHHhccCccCc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhC-----
Confidence 4899999999998864322110 112355677888888887532224899999999999999999986532
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc-------------ccHHHHHH-Hhh-----
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT-------------VDLAALQS-AIT----- 270 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~-------------~d~~~l~~-~i~----- 270 (435)
+++|+....+|++....+... +. .+..+|...... .+++.+++ .++
T Consensus 141 -r~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 219 (441)
T PRK05769 141 -RKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPP 219 (441)
T ss_pred -CCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCC
Confidence 456888888888855433221 21 233444321111 12344565 222
Q ss_pred cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCC
Q psy10210 271 GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTH 344 (435)
Q Consensus 271 ~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~h 344 (435)
+++.+|++.......|.+-+ +++|.++|++||+++|+||+++||.. .|. .+.+...| .|+++++
T Consensus 220 ~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr-----~G~---~~a~~~~gv~pDivt~~-- 289 (441)
T PRK05769 220 EEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGR-----TGK---MFAIEHFGVEPDIITLA-- 289 (441)
T ss_pred CceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----ccc---eehhhccCCCCCEEEEc--
Confidence 35778888877777788755 99999999999999999999987633 121 22222223 3888765
Q ss_pred CCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210 345 KYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 345 K~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~ 424 (435)
|.+.++.+.|+++.++ ++... .....+++ ..| +....+++.++++.+.+ ++.+++++..+++++.++
T Consensus 290 K~l~~G~p~gav~~~~-~i~~~----~~~~~~~T-----~~g--~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~ 356 (441)
T PRK05769 290 KAIAGGLPLGAVIGRA-ELMFL----PPGSHANT-----FGG--NPVAAAAALATLEELEE-GLLENAQKLGEYLRKELK 356 (441)
T ss_pred ccccCCcccEEEEEeh-hhhhc----CCCCCCCC-----CCc--CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 7654546678866654 43321 11222332 223 23345678889999987 889999998888887776
Q ss_pred hc
Q psy10210 425 NL 426 (435)
Q Consensus 425 ~l 426 (435)
++
T Consensus 357 ~l 358 (441)
T PRK05769 357 EL 358 (441)
T ss_pred HH
Confidence 54
No 327
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.58 E-value=2.9e-13 Score=136.88 Aligned_cols=266 Identities=15% Similarity=0.079 Sum_probs=162.4
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCC--CCceEE-cCC
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGP--ETCGCM-TSG 201 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~--~~~~~~-t~g 201 (435)
++..|.+...++++. +++|++.+++.+++.+....... ....+...++.+.+++++..+. +..+.+ +++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-----~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-----DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-----ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 444555443333222 24899999999988763222221 1123455667777777653221 124556 589
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C---------C---EEEEEecCCCc---cccHHHH
Q psy10210 202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G---------M---KVKHIRLTSSY---TVDLAAL 265 (435)
Q Consensus 202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g---------~---~v~~vp~~~~~---~~d~~~l 265 (435)
|+||+..|++.++.... +++|+....+|++....+... + . .+..+|.+... .-|++++
T Consensus 112 GseA~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 185 (425)
T PRK09264 112 GTNAVEAALKLARKVTG------RTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYL 185 (425)
T ss_pred HHHHHHHHHHHHHHhcC------CCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHH
Confidence 99999999999986632 456888888888854433221 1 1 24455543111 1267788
Q ss_pred HHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC-
Q psy10210 266 QSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP- 334 (435)
Q Consensus 266 ~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~- 334 (435)
++.+.+ ++++|++.......|.+ +.+++|.++|++||+++|+||+++||.. .| ..+.+...
T Consensus 186 ~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr-----tG---~~~~~~~~~ 257 (425)
T PRK09264 186 EKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGR-----TG---TFFSFERAG 257 (425)
T ss_pred HHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCcc-----cc---HHHHHhhcC
Confidence 888852 46788888877767764 5899999999999999999999987632 12 11111112
Q ss_pred -CccEEEecCCCCCCc-cCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHH-HHhcHHHHHHH
Q psy10210 335 -GVTSISVDTHKYGFT-PKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAM-MYFGFEAQVWI 411 (435)
Q Consensus 335 -gvd~~~~s~hK~~~~-p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~ 411 (435)
..|+++++ |.+.+ ...+|+++.+++ +. . +.....+++| .+. ....+++.+++ ..+..+++.++
T Consensus 258 v~PDi~t~~--K~l~~~G~pigav~~~~~-i~-~---~~~~~~~~T~-----~gn--p~~~aaa~a~l~~~~~~~~l~~~ 323 (425)
T PRK09264 258 ITPDIVTLS--KSISGYGLPMALVLIKPE-LD-V---WKPGEHNGTF-----RGN--NLAFVTATAALEEYWSDDAFEKE 323 (425)
T ss_pred CCCCEEEec--cccCCCccceEEEEEchh-hh-c---cCCCccCCCC-----CCC--HHHHHHHHHHHHHHHhhhHHHHH
Confidence 24777775 86433 345688777644 32 1 1111222222 221 12335666777 55666689999
Q ss_pred HHHHHHHHHHHHHhc
Q psy10210 412 CVRYHFNYKSCLQNL 426 (435)
Q Consensus 412 ~~~~~~~~~~~~~~l 426 (435)
++++.+.+.+.++++
T Consensus 324 ~~~~g~~l~~~l~~l 338 (425)
T PRK09264 324 VKAKGELVRERLEEI 338 (425)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988888777654
No 328
>PRK07036 hypothetical protein; Provisional
Probab=99.58 E-value=2.8e-13 Score=138.18 Aligned_cols=260 Identities=15% Similarity=0.118 Sum_probs=165.3
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+..++. ....+.+.++.+.+++++..+- +.++++++|+||+..|++.++..... +|.
T Consensus 68 ~~p~v~~Ai~~q~~~~~~~~~~~----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~~~~-~g~ 141 (466)
T PRK07036 68 GREEMADAIADQARRLPYYTPFG----DMTNAPAAELAAKLAELAPGDL-NHVFLTTGGSTAVDSALRFVHYYFNV-RGR 141 (466)
T ss_pred CCHHHHHHHHHHHHhCccccccc----ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHHHHh-cCC
Confidence 48999999999988643222110 1234556777888888774322 47999999999999999999876433 342
Q ss_pred -CCCeEEEeCCCchhHHHHHHHc-CC------------EEEEEecCCC----ccc--------cHHHHHHHhh----cCc
Q psy10210 224 -SLPEIVLPTTAHPAFDKAANYF-GM------------KVKHIRLTSS----YTV--------DLAALQSAIT----GNT 273 (435)
Q Consensus 224 -~~~~viv~~~~~~~~~~~~~~~-g~------------~v~~vp~~~~----~~~--------d~~~l~~~i~----~~~ 273 (435)
.+++|+....+|++....+... |- .+..+|.... ... .++.+++.+. +++
T Consensus 142 t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i 221 (466)
T PRK07036 142 PAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNI 221 (466)
T ss_pred CCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCce
Confidence 3567888888888855333221 11 1333433211 011 1244555553 457
Q ss_pred eEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC-CCC--ccEEEecCCCC
Q psy10210 274 VMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS-LPG--VTSISVDTHKY 346 (435)
Q Consensus 274 ~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~-~~g--vd~~~~s~hK~ 346 (435)
.+|+++......|.+ +.+++|.++|++||+++|+||++.||-. .| ..+.+. ..| .|+++++ |.
T Consensus 222 Aavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~~~~~~~gv~PDivt~g--K~ 291 (466)
T PRK07036 222 AAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGR-----LG---HFFASEAVFGIQPDIITFA--KG 291 (466)
T ss_pred EEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc-----Cc---hhhhhhhhcCCCCCEEEEc--cc
Confidence 889988887777777 3499999999999999999999988732 12 122222 223 4888776 86
Q ss_pred CCcc-CCcEEEEEeCCccccccccc---cCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210 347 GFTP-KGSSVVLYRDLKYKHCQYFV---TSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS 421 (435)
Q Consensus 347 ~~~p-~g~g~il~~~~~~~~~~~~~---~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~ 421 (435)
+.+. .++|.++.++ ++.+..... ...+ .+++| .| +....+++.++++.+.++++.++++++.+++++
T Consensus 292 l~gG~~Pi~av~~~~-~i~~~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~ 363 (466)
T PRK07036 292 LTSGYQPLGAVIISE-RLLDVISGPNAKGNVFTHGFTY-----SG--HPVACAAALKNIEIMEREGLCEHVREVGPYFEE 363 (466)
T ss_pred cccCccccEEEEEcH-HHHHHHhcccCcCcccccCCCC-----CC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5444 3578877654 443321000 0001 22222 22 223347888899999888999999999999988
Q ss_pred HHHhcC
Q psy10210 422 CLQNLS 427 (435)
Q Consensus 422 ~~~~l~ 427 (435)
.++.+.
T Consensus 364 ~L~~l~ 369 (466)
T PRK07036 364 RLASLR 369 (466)
T ss_pred HHHHhc
Confidence 887664
No 329
>KOG0258|consensus
Probab=99.58 E-value=3.8e-14 Score=133.70 Aligned_cols=224 Identities=18% Similarity=0.176 Sum_probs=162.6
Q ss_pred hhHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhc-CC--------CCccc---------cCCCCCCCCHHH
Q psy10210 55 DSLTGKLKKRVFKLARKIPAVRKKLEEETGKVAKLFQDDIKQN-NA--------GLEYF---------LELPSQGRNRLE 116 (435)
Q Consensus 55 ~~~~~~~~~~~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~-~~--------~~~~~---------~~~P~~~~~~~~ 116 (435)
+++..++++.-+..--.++....++++++.+-....++++... .+ .+.|. ..+=+.+..|.+
T Consensus 11 ~~~N~~V~k~eYAVRG~i~~rA~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~D 90 (475)
T KOG0258|consen 11 DSLNPNVKKAEYAVRGPIVIRADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTD 90 (475)
T ss_pred hhcChhhhhhhhhhccchhhhHHHHHHHHHhcccCChHHHHhhcCCCHHHhCCCChhHHHHHHHHhcChhhcCCCCCCHH
Confidence 4555666666666666667767777777766321111111110 00 01110 111123346788
Q ss_pred HHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCce
Q psy10210 117 ILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCG 196 (435)
Q Consensus 117 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~ 196 (435)
++++....+...+- +.-.|....|.+-+|+.+++.++++.. .|. ++ ++|
T Consensus 91 ai~RA~~~L~~~gG----s~GaYS~SqGv~~vR~~VA~~I~rRDG-~p~-------------------------~p-~dI 139 (475)
T KOG0258|consen 91 AIKRAKRILNDCGG----SLGAYSDSQGVPGVRKHVAEFIERRDG-IPA-------------------------DP-EDI 139 (475)
T ss_pred HHHHHHHHHHhcCC----cccccccccCChhHHHHHHHHHHhccC-CCC-------------------------CH-HHe
Confidence 88888888876421 223355666899999999999988755 333 33 389
Q ss_pred EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc---
Q psy10210 197 CMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG--- 271 (435)
Q Consensus 197 ~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~--- 271 (435)
++|+|++.|+...+..+... . ++-|++|-|.|+-|...+..+|...+..-+| .+|.+|.+++++.+++
T Consensus 140 ~LT~GAS~ai~~il~l~~~~--~-----~~GvliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k 212 (475)
T KOG0258|consen 140 FLTTGASPAIRSILSLLIAG--K-----KTGVLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARK 212 (475)
T ss_pred eecCCCcHHHHHHHHHHhcC--C-----CCceEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhc
Confidence 99999999999999988643 2 2339999999999999999999988777776 6899999999998875
Q ss_pred --CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210 272 --NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLA 316 (435)
Q Consensus 272 --~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~ 316 (435)
+++++++.+|.||||.+ +.+++|.++|+++++.++.||+|-.-++
T Consensus 213 ~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 213 GINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred cCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 67899999999999999 8899999999999999999999987665
No 330
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.58 E-value=1.1e-13 Score=136.37 Aligned_cols=226 Identities=19% Similarity=0.116 Sum_probs=153.2
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+.....+. + ..+...++.+.++++++. +.++++++||||+..|++.++....
T Consensus 41 ~~p~v~~ai~~ql~~~~~~~~~----~--~~~~~~~la~~l~~~~~~---~~v~~~~SGseA~e~Alklar~~~g----- 106 (364)
T PRK04013 41 NHPEWVEEMSEQLEKLVVAGPM----F--EHEEKEEMLEELSKWVNY---EYVYMGNSGTEAVEAALKFARLYTG----- 106 (364)
T ss_pred CCHHHHHHHHHHHHhcCCccCC----c--CCHHHHHHHHHHHhhcCC---CEEEEeCchHHHHHHHHHHHHHHhC-----
Confidence 4899999999998874322221 1 123445566677777754 3789999999999999999876532
Q ss_pred CCCeEEEeCCCchhHHHHHHHc--------CC-----EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc-c
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF--------GM-----KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-D 289 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~--------g~-----~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~ 289 (435)
+++|+..+.+|++....+... +. .+..+|. .|++++++.+.+++++|++.......|.. .
T Consensus 107 -r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~ 180 (364)
T PRK04013 107 -RKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-----NDVEAAKEAITKETAAVIFEPIQGEGGIVPA 180 (364)
T ss_pred -CCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-----CCHHHHHHHhcCCcEEEEEcCCcCCCCCcCC
Confidence 356999988888855443331 11 1222222 26788999998899999999887766665 2
Q ss_pred ---CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 290 ---DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 290 ---~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
.++++.++|++||+++|+||++.|+ .. |. .+.+...+ .|+++++ |.+.+...+|.++.+++ +.
T Consensus 181 ~~~yl~~lr~lc~~~gillI~DEv~tG~-Rt-----G~---~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~~~~~-~~ 248 (364)
T PRK04013 181 KEEFVKTLRDLTEDVGALLIADEVQSGL-RT-----GK---FLAIEHYKVEPDIVTMG--KGIGNGVPVSLTLTNFD-VE 248 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhcC-CC-----Cc---hhHHHhcCCCCCEEEec--ccccCCceeEEEEeccc-cc
Confidence 3999999999999999999999987 31 21 22332233 4888875 77555566788676543 21
Q ss_pred cccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210 365 HCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415 (435)
Q Consensus 365 ~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~ 415 (435)
+...+++|+..+ .+.+++.++++.+.++++.+++++.
T Consensus 249 -------~~~~~~T~~gnp-------~~~aaa~a~l~~i~~~~l~~~~~~~ 285 (364)
T PRK04013 249 -------RGKHGSTFGGNP-------LACKAVAVTLRILRRERLVEKAGEK 285 (364)
T ss_pred -------CCCcCCCCCcCH-------HHHHHHHHHHHHHHhccHHHHHHHH
Confidence 112333333222 2347888999999999999888875
No 331
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.58 E-value=1.1e-13 Score=144.41 Aligned_cols=226 Identities=13% Similarity=0.109 Sum_probs=156.1
Q ss_pred HHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHHH-HHhhcCCC-CCCCCcChhHHHHHHHHHHHHHHHhCC
Q psy10210 117 ILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTEV-FGLTSYTN-PLHPDIFPGVCKMEAEVIKMCARMFNG 190 (435)
Q Consensus 117 i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~~-~~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~l~g~ 190 (435)
+.+.+.++...+...|.-+...++..- -.| .+.+..-+. +.. .-++ --.-+.--.......+..+..|+.||+
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~f~k~p~G~~f~~f~Gen~~r~-Dlt~ev~~LddLl~~~G~i~eAe~~AA~~fgA 210 (714)
T PRK15400 132 LTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKS-DISISVSELGSLLDHSGPHKEAEEYIARVFNA 210 (714)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhh-hccccccCCCCCCCCChHHHHHHHHHHHHhCC
Confidence 788899998888888865555443321 122 233322111 111 0110 000011111234556777889999998
Q ss_pred CCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CC----cccc----
Q psy10210 191 GPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SS----YTVD---- 261 (435)
Q Consensus 191 ~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~----~~~d---- 261 (435)
+. .-++++|+|.+|..++.+.+.+++. |+++..+|-+...++...|+.+++++.. +. +.++
T Consensus 211 d~--tyfvvNGTS~~n~av~~a~~~~Gd~--------VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi~g~I~~~~~ 280 (714)
T PRK15400 211 DR--SYMVTNGTSTANKIVGMYSAPAGST--------VLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEF 280 (714)
T ss_pred Cc--EEEEeCchHHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeEEEecccccccCCccCCCcccc
Confidence 75 4788999999999999999988887 9999999999999999999999999765 22 2345
Q ss_pred -HHHHHHHhhcC-----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 262 -LAALQSAITGN-----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 262 -~~~l~~~i~~~-----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+.+++++.++ ++.+++++|++ .|.+.++++|+++|+.++ +++|+||++.... ... ++ +..... .|
T Consensus 281 ~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F-~p~--~~-~~sam~-~g 352 (714)
T PRK15400 281 QHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNF-SPI--YE-GKCGMS-GG 352 (714)
T ss_pred CHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhcc-Ccc--cC-CcChhh-cC
Confidence 88999998753 23799999977 999999999999999887 7999999987532 110 10 011111 23
Q ss_pred c---c--EEEecCCCCCCccCCcEEEEEeCC
Q psy10210 336 V---T--SISVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 336 v---d--~~~~s~hK~~~~p~g~g~il~~~~ 361 (435)
. | +++.|+||.+.+-..+|++.++..
T Consensus 353 a~~~~~i~vtQStHKtL~alTQaS~LHvkg~ 383 (714)
T PRK15400 353 RVEGKVIYETQSTHKLLAAFSQASMIHVKGD 383 (714)
T ss_pred CCCCCceEEEEchhhcccchhHHhHHHHcCC
Confidence 3 4 889999999877788888877653
No 332
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.58 E-value=1.8e-13 Score=139.49 Aligned_cols=252 Identities=13% Similarity=0.034 Sum_probs=157.0
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
+++|++.+++.+.+.+....... ....+.+.++.+.+++++.....+.++++++|+||++.|++.++....
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tg---- 140 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTGFN-----VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK---- 140 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-----ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhC----
Confidence 35999999999998864322111 123456778888888888543224899999999999999999986632
Q ss_pred CCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCC-----Ccccc-------HHHHHHHh----h-c
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTS-----SYTVD-------LAALQSAI----T-G 271 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~-----~~~~d-------~~~l~~~i----~-~ 271 (435)
+++|+....+|++....+... +- .+..+|... .+..+ ++.+++.+ . +
T Consensus 141 --r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (451)
T PRK06918 141 --RQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPE 218 (451)
T ss_pred --CCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCC
Confidence 356888888888865444322 21 123333221 11000 22344433 2 3
Q ss_pred CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCC
Q psy10210 272 NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHK 345 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK 345 (435)
++.+|+++..+...|.+ +.+++|.++|++||+++|+||+|.+|... | ..+.+...+ .|++++ .|
T Consensus 219 ~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~-----g---~~~a~~~~~v~pDi~t~--sK 288 (451)
T PRK06918 219 TIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFART-----G---KYFAIEHFDVVPDLITV--SK 288 (451)
T ss_pred ceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCcc-----C---ceehhHhcCCCCCEEee--eh
Confidence 56677776655545654 45999999999999999999999988431 2 122222223 476654 58
Q ss_pred CCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 346 YGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 346 ~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
.+.+...+|+++.++ ++.+.. .....+++++..+ ...+++.++++.+..+++.+++++..+.+.+.++.
T Consensus 289 ~l~~G~pig~v~~~~-~i~~~~---~~~~~~~T~~g~~-------l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~ 357 (451)
T PRK06918 289 SLGAGVPISGVIGRK-EIMDES---APGELGGTYAGSP-------LGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEE 357 (451)
T ss_pred hhcCCCccEEEEEcH-HHHhcc---CCCCcCcCCCcCH-------HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 765557789977654 443321 1112222222222 22356677888887788889998888888777766
Q ss_pred c
Q psy10210 426 L 426 (435)
Q Consensus 426 l 426 (435)
+
T Consensus 358 l 358 (451)
T PRK06918 358 M 358 (451)
T ss_pred H
Confidence 5
No 333
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.58 E-value=6.2e-13 Score=138.87 Aligned_cols=221 Identities=14% Similarity=0.131 Sum_probs=155.7
Q ss_pred HHHHHHHHHhCCCCCCCCCcccccccC-ChH---hHHHHHHH-HHHhh------cCCCCCCCCcChhHHHHHHHHHHHHH
Q psy10210 117 ILELVSNYLARGHYDWKHGRVSGAVYY-YQQ---DLVDLLTE-VFGLT------SYTNPLHPDIFPGVCKMEAEVIKMCA 185 (435)
Q Consensus 117 i~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~---~l~~~i~~-~~~~~------~~~~~~~~~~~~~~~~~e~~~~~~la 185 (435)
+++.+.++...+...|.-+...++..- -.| .+.+..-+ .++.. ...+.++ ......+..+..|
T Consensus 132 ~~~aL~~y~~~~~~sfh~PGHkgG~~~~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~------~~G~i~eAe~~aA 205 (713)
T PRK15399 132 FTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLD------HTGPHLEAEEYIA 205 (713)
T ss_pred HHHHHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCC------CChHHHHHHHHHH
Confidence 788899998888888875555443321 122 33333221 12110 0112222 2345566777889
Q ss_pred HHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-C-C---ccc
Q psy10210 186 RMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-S-S---YTV 260 (435)
Q Consensus 186 ~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~-~---~~~ 260 (435)
+.||++. .-++++|+|.+|..++.+.+.+++. |+++..+|-+...++...|+.+++++.. + . +.+
T Consensus 206 ~~fgAd~--tyfvvNGTS~~n~av~~a~~~~Gd~--------VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi~g~I 275 (713)
T PRK15399 206 RTFGAEQ--SYIVTNGTSTSNKIVGMYAAPAGST--------LLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGI 275 (713)
T ss_pred HHhCCCc--EEEEeCChHHHHHHHHHHhcCCCCE--------EEeecccHHHHHHHHHHcCCeeEEecccccccCCcCCC
Confidence 9999975 5788999999999999999998887 9999999999999999999999999754 2 1 234
Q ss_pred cH-----HHHHHHhhcC-----ceEEEEeCCCCCcccccCHHHHHHHHHHcCCcE-EEeccccchhhhcccccCCCCCCC
Q psy10210 261 DL-----AALQSAITGN-----TVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPV-HVDCCLGGFLAPFMSAAGYPLPPF 329 (435)
Q Consensus 261 d~-----~~l~~~i~~~-----~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~l-ivD~~~~~~~~~~~~~~g~~~~~~ 329 (435)
+. +.+++++.++ ++++++++|+. .|.+.++++|.++| |+.+ |+|+||++... |... ++ +..
T Consensus 276 ~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~-F~p~--~~-~~s 347 (713)
T PRK15399 276 PRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTH-FHPI--YQ-GKS 347 (713)
T ss_pred ChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhh-cCcc--cC-CcC
Confidence 55 8888888643 36899999977 99999999999999 6777 69999998653 2110 10 011
Q ss_pred CCCC-CCccEE---EecCCCCCCccCCcEEEEEeCC
Q psy10210 330 DFSL-PGVTSI---SVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 330 d~~~-~gvd~~---~~s~hK~~~~p~g~g~il~~~~ 361 (435)
.... .+.|.. +.|+||.+.+-..+|++.++..
T Consensus 348 am~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~ 383 (713)
T PRK15399 348 GMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE 383 (713)
T ss_pred hhhCCCCCCeeeeeeeehhccccccchheeeeecCC
Confidence 1111 245666 8999999888888999988663
No 334
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=1.9e-13 Score=138.24 Aligned_cols=248 Identities=15% Similarity=0.073 Sum_probs=162.0
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+.... ....+.+.++.+.+++++.. .+.+.++++|+||+..|++.++....
T Consensus 70 ~~p~v~~ai~~q~~~~~~~--------~~~~~~~~~la~~l~~~~p~--~~~v~f~~sGseA~e~AlklAr~~tg----- 134 (428)
T PRK12389 70 AHPHITKAITEAAENGVLY--------GTPTELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYTG----- 134 (428)
T ss_pred CCHHHHHHHHHHHHhCCcc--------CCCCHHHHHHHHHHHHhCCC--CcEEEEeCCHHHHHHHHHHHHHHhhC-----
Confidence 4899999999998763211 11234567777888887742 24899999999999999999987632
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CCEEEE--------Ee--cCCCc----cccHHHHHHHhh---cCceEEEEeCCCCCc
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GMKVKH--------IR--LTSSY----TVDLAALQSAIT---GNTVMLVGSMPNFPY 285 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~~v~~--------vp--~~~~~----~~d~~~l~~~i~---~~~~~v~~~~p~npt 285 (435)
+++|+....+|++....+... |..... ++ ..++. ..|++.+++.+. +++.+|+++......
T Consensus 135 -r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~ 213 (428)
T PRK12389 135 -RTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNF 213 (428)
T ss_pred -CCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCC
Confidence 356888888888855443322 211100 00 00000 126888888885 467888888887777
Q ss_pred ccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEe
Q psy10210 286 GTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYR 359 (435)
Q Consensus 286 G~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~ 359 (435)
|.+.+ +++|.++|++||+++|+||+++|| .. ++. +.....| .|+++++ |.+.+...+|.++.+
T Consensus 214 G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt-----~~~---~a~~~~gv~PDivt~g--K~lggG~Pi~av~~~ 282 (428)
T PRK12389 214 GIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RF-----MYG---GAQDLLGVEPDLTALG--KIIGGGLPIGAYGGR 282 (428)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-cc-----Ccc---hhhHHhCCCCCeeeec--hhhcCCCceeEEeEH
Confidence 88755 999999999999999999999988 32 111 0111112 4777665 875555667886554
Q ss_pred CCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 360 DLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 360 ~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
+++.+......+.+.+++|+ | +..+.+++.++++.+.++++.++++++.+++++.++++
T Consensus 283 -~~i~~~~~~~~~~~~~~T~~-----g--npl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l 341 (428)
T PRK12389 283 -KDIMEQVAPLGPAYQAGTMA-----G--NPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEA 341 (428)
T ss_pred -HHHHhhhccCCCcccccCCc-----c--CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 45543311011122333322 2 22334788899999988889999999999988887764
No 335
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.58 E-value=1.4e-13 Score=138.93 Aligned_cols=267 Identities=14% Similarity=0.052 Sum_probs=167.0
Q ss_pred CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...+++. -+++|++.+++.+.+.+...... . ....+...++.+.+++++.....+.++++++|||
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~---~--~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGse 112 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY---Q--IVPYASYVTLAERINALAPIDGPAKTAFFTTGAE 112 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc---c--ccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHH
Confidence 34455444333222 23589999999999887432211 0 1122344567777888775322247899999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCc-----cccHHHH
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSY-----TVDLAAL 265 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~-----~~d~~~l 265 (435)
|+..|++.++.... +++|+....+|++....+... +. .+..+|..... ..+++.+
T Consensus 113 A~e~AlklAr~~tg------r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 186 (421)
T PRK06777 113 AVENAVKIARAYTG------RPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSV 186 (421)
T ss_pred HHHHHHHHHHHhhC------CCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHH
Confidence 99999999886532 456888888888865444322 21 11222222110 1236667
Q ss_pred HHHhh-----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210 266 QSAIT-----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG- 335 (435)
Q Consensus 266 ~~~i~-----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g- 335 (435)
++.+. +++.+|+++...+..|.. +.+++|.++|++||+++|+||+|.||.. .| ..+.....+
T Consensus 187 ~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr-----~g---~~~~~~~~~~ 258 (421)
T PRK06777 187 ERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFAR-----TG---KLFAMEYYDV 258 (421)
T ss_pred HHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCcc-----CC---chhhhhhcCC
Confidence 77774 357888888888877854 5699999999999999999999998633 12 122222223
Q ss_pred -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
.|++++ .|.+.+...+|+++.+ +++.+.. .....+++ ..+ +....+++.++++.+..+++.+++++
T Consensus 259 ~pDiv~~--sK~l~~G~pigav~~~-~~i~~~~---~~~~~~~T-----~~~--~p~~~aaa~a~L~~~~~~~l~~~~~~ 325 (421)
T PRK06777 259 KPDLITM--AKSLGGGMPISAVVGR-AEVMDAP---APGGLGGT-----YAG--NPLAVAAALAVLDVIAEEKLCQRALI 325 (421)
T ss_pred CCCEEee--ehhhcCCCceEEEEEc-HHHHhcc---CCCCCCCC-----CCc--CHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 476654 5875444668887765 4444331 11122222 222 22334677888888877888889988
Q ss_pred HHHHHHHHHHhc
Q psy10210 415 YHFNYKSCLQNL 426 (435)
Q Consensus 415 ~~~~~~~~~~~l 426 (435)
..+++.+.++++
T Consensus 326 ~g~~l~~~L~~l 337 (421)
T PRK06777 326 LGAHLVEVLEKA 337 (421)
T ss_pred HHHHHHHHHHHH
Confidence 888888887765
No 336
>PRK06105 aminotransferase; Provisional
Probab=99.57 E-value=2e-13 Score=139.11 Aligned_cols=280 Identities=15% Similarity=0.085 Sum_probs=171.3
Q ss_pred CCCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.++..|.+...+. ..-+++|++.+++.+++.+..+.+.. .....+.+.++.+.+++++..+- +.++++++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 119 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTF----SHKSHGPVIDLAEKLVAMAPVPM-SKVFFTNSGS 119 (460)
T ss_pred CCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecc----cccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 3445555443332 22234899999999998874322211 11234556677788888875322 4799999999
Q ss_pred HHHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHH-cCC------------EEEEEecCCCcc----------
Q psy10210 204 ESIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANY-FGM------------KVKHIRLTSSYT---------- 259 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~-~g~------------~v~~vp~~~~~~---------- 259 (435)
||+..|++.++..... +|. .+.+|+....+|++....+.. .+. .+..+|......
T Consensus 120 eAve~AlKlar~~~~~-~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 198 (460)
T PRK06105 120 EANDTVVKLVWYYNNA-LGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA 198 (460)
T ss_pred HHHHHHHHHHHHHHHh-cCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence 9999999998765432 343 356788888887775433221 111 122333211100
Q ss_pred ---ccHHHHHHHhh----cCceEEEEeCCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC
Q psy10210 260 ---VDLAALQSAIT----GNTVMLVGSMPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP 328 (435)
Q Consensus 260 ---~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~ 328 (435)
...+++++.+. +++++|++.......|.+. .++++.++|++||+++|+||++.||-.. | ..
T Consensus 199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt-----G---~~ 270 (460)
T PRK06105 199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT-----G---NM 270 (460)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC-----c---hh
Confidence 12456777763 3578888888777667763 4999999999999999999999887331 2 12
Q ss_pred CCCCCCC--ccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHhc
Q psy10210 329 FDFSLPG--VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGNY-GSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 329 ~d~~~~g--vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~~-~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
+.+...| .|+++++ |.+.+. .+.|.++.++ ++.+... ......+.+ -..|..| +..+.+++.++|+.+.
T Consensus 271 f~~~~~~v~PDi~~~g--K~lggG~~P~~av~~~~-~i~~~~~--~~~~~~~~~~h~~T~~g--npl~~aaa~a~L~~i~ 343 (460)
T PRK06105 271 FGCETFGIKPDILVMS--KQLSSSYQPLSAVLMNE-KVYDPIA--DESGKIGTFGHGFTASG--HPVAAAVALENLAIIE 343 (460)
T ss_pred hhHHhcCCCCCeeeee--cccccCcccceEEEEcH-HHHHHHh--cccccCcccccCCCCCC--CHHHHHHHHHHHHHHH
Confidence 2233333 4888776 775443 3567767664 4432210 000100100 0112222 2233467888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 405 FEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
++++.+++++..+.+++.++++.
T Consensus 344 ~~~l~~~v~~~g~~l~~~L~~l~ 366 (460)
T PRK06105 344 ERDLVGNAAERGARLQARLRALA 366 (460)
T ss_pred hccHHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999998888763
No 337
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.57 E-value=6.1e-14 Score=138.24 Aligned_cols=260 Identities=11% Similarity=-0.024 Sum_probs=168.9
Q ss_pred CcccccccCChHh-HHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHH
Q psy10210 135 GRVSGAVYYYQQD-LVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKA 212 (435)
Q Consensus 135 ~~~~~~~~~g~~~-l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a 212 (435)
+.++-++....|. +.+++.+.+- -..+..|.+.++..++.+.+.++++.+.+ ..+++++|||.++..++.+
T Consensus 5 ~~f~~gp~~~~~~~~~~~~~~~~~-------~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~n 77 (374)
T TIGR01365 5 PCFSSGPCAKRPGWSIEELKNAPL-------GRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWS 77 (374)
T ss_pred CCcCCCccCCCchhhHHHHhhhhc-------ccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHH
Confidence 3444444444565 5555544322 22356889999999999999999997543 3467799999999999999
Q ss_pred HHH-HhhhhcCCCCCeEEEeCCCchh-HH-HHHHHcCC-EEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc
Q psy10210 213 YRD-YAREEKGISLPEIVLPTTAHPA-FD-KAANYFGM-KVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM 288 (435)
Q Consensus 213 ~~~-~~~~~~g~~~~~viv~~~~~~~-~~-~~~~~~g~-~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~ 288 (435)
+.. +++. +++.. .|.. +. +.++..|+ ++..+..+.+..+|+++++. . +.|++++..+.||+.
T Consensus 78 l~~~~g~~--------vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~ 143 (374)
T TIGR01365 78 MLGCRGVD--------VLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K---NDVVFTWNGTTSGVR 143 (374)
T ss_pred cCCCCCCe--------EEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C---CCEEEecCCCchhee
Confidence 873 4544 77654 3333 34 88888999 47888766666789988873 1 226788999999999
Q ss_pred cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccc
Q psy10210 289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQY 368 (435)
Q Consensus 289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~ 368 (435)
.|++++.+.+ ++++++||++.+-+ ..++++. ++|++..+++|.+.+|.|.|++.++++.+.....
T Consensus 144 npv~~i~~~~--~~~lliVDavSs~g-----------~~~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~ 208 (374)
T TIGR01365 144 VPNGDFIPAD--REGLTICDATSAAF-----------AQDLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLES 208 (374)
T ss_pred cccccccccc--CCCcEEEEccchhc-----------CCCCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhh
Confidence 9987666332 58999999996533 2366665 4999999999999999999999999887643210
Q ss_pred -cccCCCCC-------CC----CCCCccccCCCchHHHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210 369 -FVTSDWPG-------GN----YGSPSVSGSRSGGIIATCWAAMMYFGFE-AQVWICVRYHFNYKSCLQNLSDLW 430 (435)
Q Consensus 369 -~~~~~~~g-------g~----~~~~~~~gsr~~~~ia~~~a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~l~ 430 (435)
....+|.. +. ....+...+.+...+.++..+++.+..+ |+.++.+++.+..+...+.++++.
T Consensus 209 ~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 209 YTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNN 283 (374)
T ss_pred cCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 00001111 00 0011222233333343444445544444 677777777666666665555443
No 338
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.56 E-value=2.6e-13 Score=132.19 Aligned_cols=260 Identities=14% Similarity=0.076 Sum_probs=178.5
Q ss_pred CCCCCCCCcccccccC-C--hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVYY-Y--QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~~-g--~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+-..++++.. | +|.+.+++.+.+++-. .+..-.+.|.++.+.+.++++.- +.+-++++|||
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~--------~fg~Pte~Ei~~Aell~~~~p~~--e~vrfvnSGTE 120 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL--------SFGAPTELEVELAELLIERVPSI--EKVRFVNSGTE 120 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC--------CCCCCCHHHHHHHHHHHHhcCcc--cEEEEecchhH
Confidence 4444444333333332 3 8999999999988731 12334688999999999998543 47999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH-cC--C-----------------EEEEEecCCCccccHHH
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY-FG--M-----------------KVKHIRLTSSYTVDLAA 264 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~-~g--~-----------------~v~~vp~~~~~~~d~~~ 264 (435)
|.+.|++.+|.... +++|+..+-+|++..+.+.. .| . .++.+|. -|++.
T Consensus 121 AtmsAiRlARa~Tg------R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-----ND~~a 189 (432)
T COG0001 121 ATMSAIRLARAYTG------RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-----NDLEA 189 (432)
T ss_pred HHHHHHHHHHHhhC------CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-----CCHHH
Confidence 99999999986654 36799898888885544333 22 1 1222332 28999
Q ss_pred HHHHhhc---CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 265 LQSAITG---NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 265 l~~~i~~---~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
+++++.+ +..+|++......-|.+ +.+++|.++|++||+.+|.||+..||-.++....++ +.. ..|
T Consensus 190 l~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~----~gi---~PD 262 (432)
T COG0001 190 LEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGY----YGV---EPD 262 (432)
T ss_pred HHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccc----cCc---Ccc
Confidence 9998875 57888888766667887 568999999999999999999999987754332221 111 125
Q ss_pred EEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH-HHHHHHHHHHH
Q psy10210 338 SISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF-EAQVWICVRYH 416 (435)
Q Consensus 338 ~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~-~g~~~~~~~~~ 416 (435)
+.++. |..+|..++|+ +..++++.+......+-++.|+ +.| +..++++..++++.+.. ++..+++.+..
T Consensus 263 lttlG--KiIGGGlP~ga-~gGr~eiM~~~~p~g~vyqaGT-----~sg--nplamaAG~atl~~l~~~~~~y~~l~~~~ 332 (432)
T COG0001 263 LTTLG--KIIGGGLPIGA-FGGRAEIMEQLAPLGPVYQAGT-----LSG--NPLAMAAGLATLEELMTEEGVYERLDALG 332 (432)
T ss_pred hhhhh--hhhcCCcceee-eccHHHHHhhhCCCCCccccCC-----CCC--cHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 55555 98878888888 5566677665333334444443 333 44566889999998876 46777777777
Q ss_pred HHHHHHHHh
Q psy10210 417 FNYKSCLQN 425 (435)
Q Consensus 417 ~~~~~~~~~ 425 (435)
+.+.+-+++
T Consensus 333 ~~L~~gl~~ 341 (432)
T COG0001 333 ERLAEGLRA 341 (432)
T ss_pred HHHHHHHHH
Confidence 777766654
No 339
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3e-13 Score=137.47 Aligned_cols=249 Identities=18% Similarity=0.048 Sum_probs=160.7
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+.... -...+...++.+.++++++... +.+.++++|+||+..|++.++....
T Consensus 70 ~~p~i~~Ai~~ql~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tg----- 138 (457)
T PRK05639 70 SHPKLVKAVQEQVALIQHSMIG-----YTHSERAIRVAEKLAEISPIEN-PKVLFGLSGSDAVDMAIKVSKFSTR----- 138 (457)
T ss_pred CCHHHHHHHHHHHHhccccccC-----ccCCHHHHHHHHHHHhhCCCCc-CEEEEeCchHHHHHHHHHHHHHhcC-----
Confidence 4899999999998864222111 0113455667778888775332 3899999999999999999986532
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCCcc--------cc--------HHHHHHHh----
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSSYT--------VD--------LAALQSAI---- 269 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~~~--------~d--------~~~l~~~i---- 269 (435)
+++|+....+|++....+... +. .+..+|.+.... -| ++.+++.+
T Consensus 139 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 217 (457)
T PRK05639 139 -RPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHV 217 (457)
T ss_pred -CCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhh
Confidence 456888888888854433221 11 244455432111 02 23455544
Q ss_pred --hcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEe
Q psy10210 270 --TGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISV 341 (435)
Q Consensus 270 --~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~ 341 (435)
.+++.+|+++......|.+ +.+++|.++|++||+++|+||+++||-. .| ..+.....| .|++++
T Consensus 218 ~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr-----tG---~~~a~~~~gv~PDiv~~ 289 (457)
T PRK05639 218 VPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR-----TG---KWFASEWFEVKPDLIIF 289 (457)
T ss_pred cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc-----Cc---hHHHHHhcCCCCCEEEe
Confidence 2467888888877766765 5699999999999999999999988632 12 122222222 488886
Q ss_pred cCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210 342 DTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS 421 (435)
Q Consensus 342 s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~ 421 (435)
+ |.+.+..++|+++.++ ++.+. .....+++ ..+ +....+++.++++.+..+++.+++++..+++++
T Consensus 290 g--K~l~gG~pi~av~~~~-~i~~~----~~~~~~~T-----~~g--~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 355 (457)
T PRK05639 290 G--KGVASGMGLSGVIGRK-ELMDL----TSGSALLT-----PAA--NPVISAAAEATLEIIEEENLLKNALKVGEFIKK 355 (457)
T ss_pred c--hhhcCCCcceeEEehH-HHHhh----cCCCcccC-----CCc--CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 4 8765557778866654 44331 11111122 222 223346888899999999999999999888888
Q ss_pred HHHhc
Q psy10210 422 CLQNL 426 (435)
Q Consensus 422 ~~~~l 426 (435)
.++++
T Consensus 356 ~L~~l 360 (457)
T PRK05639 356 RLLEM 360 (457)
T ss_pred HHHHH
Confidence 87765
No 340
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.56 E-value=9.8e-14 Score=140.59 Aligned_cols=263 Identities=14% Similarity=0.052 Sum_probs=158.3
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...+.+.. +++|++.+++.+++.+.. .+ ....+...++++.+++.+... +.+++|+||+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~-----~~~~~~~~~lae~l~~~~~~~--~~v~~~~sGse 115 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGT---SY-----GAPTEAEILLAKEIISRVPSV--EMVRFVNSGTE 115 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCC---cC-----CCCCHHHHHHHHHHHHhCCcc--cEEEEeCCHHH
Confidence 444555443333232 358999999999887621 11 112234566777777777542 47999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc---CCEEEEEecCC---------Cc---cccHHHHHHHh
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF---GMKVKHIRLTS---------SY---TVDLAALQSAI 269 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~---g~~v~~vp~~~---------~~---~~d~~~l~~~i 269 (435)
|+..|++.++.... +++|+..+++|+++...+... +......|..+ .. ..|++++++++
T Consensus 116 A~e~Alk~ar~~~g------r~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i 189 (423)
T TIGR00713 116 ATMSAVRLARGYTG------RDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVF 189 (423)
T ss_pred HHHHHHHHHHHhhC------CCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHH
Confidence 99999999876532 357999999999865433321 11110011000 00 12789999988
Q ss_pred h---cCceEEEEe-CCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEe
Q psy10210 270 T---GNTVMLVGS-MPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISV 341 (435)
Q Consensus 270 ~---~~~~~v~~~-~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~ 341 (435)
. +++++|+++ .++| +|.+. .+++|.++|++||+++|+||+|.++.... .+. ...++. ..|++
T Consensus 190 ~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~---~~~-~~~~~~---~pDi~-- 259 (423)
T TIGR00713 190 EEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL---GGA-QEYFGV---EPDLT-- 259 (423)
T ss_pred HHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc---chh-HHHhCC---Ccchh--
Confidence 7 567888886 6666 78773 38999999999999999999998873310 010 001111 13544
Q ss_pred cCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q psy10210 342 DTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKS 421 (435)
Q Consensus 342 s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~ 421 (435)
++.|.+.+...+|+++.++ ++.+........+.+++++. +....+++.++++.+..+++.+++++..+.+++
T Consensus 260 t~sK~l~~G~pig~v~~~~-~i~~~~~~~~~~~~~~T~~~-------~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~ 331 (423)
T TIGR00713 260 TLGKIIGGGLPVGAFGGRR-EIMERLAPEGPVYQAGTLSG-------NPLAMAAGLATLKLLDEEGVYTELDELAKRLAE 331 (423)
T ss_pred hhhhhhcCCCceeeeeEHH-HHHHhhCcCCCeeeccCCCC-------CHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4568754445578866654 44433111111122222222 222336777888888766677777777777665
Q ss_pred HHH
Q psy10210 422 CLQ 424 (435)
Q Consensus 422 ~~~ 424 (435)
.++
T Consensus 332 ~l~ 334 (423)
T TIGR00713 332 GLS 334 (423)
T ss_pred HHH
Confidence 554
No 341
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3.3e-13 Score=137.33 Aligned_cols=250 Identities=14% Similarity=0.046 Sum_probs=159.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..... .....+...++.+.++++++... +.++++++|+||+..|++.++....
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~------~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseAve~AlklAr~~tg----- 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSP------RRFTNETAIECAEKLTEIAGGEL-NRVLFAPGGTSAIGMALKLARHITG----- 155 (459)
T ss_pred CCHHHHHHHHHHHHhCCCcc------CccCCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHHHHHHHHHHHHhcC-----
Confidence 58999999999988643221 11224666778888888885322 4899999999999999999886532
Q ss_pred CCCeEEEeCCCchhHHH-HHHHcCC------------EEEEEecCCCcc-----c------cHHHHHHHhh--cCceEEE
Q psy10210 224 SLPEIVLPTTAHPAFDK-AANYFGM------------KVKHIRLTSSYT-----V------DLAALQSAIT--GNTVMLV 277 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~-~~~~~g~------------~v~~vp~~~~~~-----~------d~~~l~~~i~--~~~~~v~ 277 (435)
+++|+.....|++... +....|. .+..+|...... . +++.+++.+. +++.+|+
T Consensus 156 -r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavI 234 (459)
T PRK06082 156 -NFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFI 234 (459)
T ss_pred -CCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 3568877777777443 3322221 123343211110 1 1355777775 3577888
Q ss_pred EeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCcc-C
Q psy10210 278 GSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTP-K 351 (435)
Q Consensus 278 ~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p-~ 351 (435)
+....+..+.+ +.+++|.++|++||+++|+||+++||-. .| ..+.+...| .|+++++ |.+.+. .
T Consensus 235 vEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GR-----tG---~~fa~e~~gv~PDiv~~g--Kgl~gG~~ 304 (459)
T PRK06082 235 AEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGR-----TG---EWFTHQAYGIEPDILCIG--KGLGGGLV 304 (459)
T ss_pred ECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc-----cc---hhhHhHhhCCCCCEEEec--ccccCCCC
Confidence 88776643223 3499999999999999999999998632 22 223333334 4888754 875554 3
Q ss_pred CcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 352 GSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 352 g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
.+|.++.+++ +.... ...+. ..|..| +..+.+++.++++.+.++++.++++++.+++++.++++.
T Consensus 305 P~~av~~~~~-i~~~~---~~~~~-----~~T~~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~ 369 (459)
T PRK06082 305 PIAAMITKDK-YNTAA---QISLG-----HYTHEK--SPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMK 369 (459)
T ss_pred cceEEEEcHH-HHhhc---cCCCC-----CCCCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 5788677654 32211 11010 112222 223346888899999888899999999999888887653
No 342
>KOG1401|consensus
Probab=99.55 E-value=4.2e-13 Score=127.98 Aligned_cols=258 Identities=12% Similarity=0.009 Sum_probs=175.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++.+++.+.+.++..... ...+.+ ..++.+.+.+..+-...+.+.++++||||+..|++.+++....+.+.
T Consensus 73 anpev~ral~~q~~k~~hs~~-----~~~t~e-av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~ 146 (433)
T KOG1401|consen 73 ANPEVARALAEQAKKLGHSSN-----GYFTLE-AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPE 146 (433)
T ss_pred CCHHHHHHHHHHHhhheeccC-----ccccHH-HHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCc
Confidence 489999999999988644321 112223 44555556665544455689999999999999999999877664444
Q ss_pred CCCeEEEeCCCchhH-HHHHHHcCCEEEEEecC---CC----ccccHHHHHHHhhcC---ceEEEEeCCCCCcccc----
Q psy10210 224 SLPEIVLPTTAHPAF-DKAANYFGMKVKHIRLT---SS----YTVDLAALQSAITGN---TVMLVGSMPNFPYGTM---- 288 (435)
Q Consensus 224 ~~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~~---~~----~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~---- 288 (435)
++..+|....+|++- .-++...+..-...|.+ ++ -.-|..++++.++.. .++|++...+-..|.+
T Consensus 147 ~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~p 226 (433)
T KOG1401|consen 147 KKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADP 226 (433)
T ss_pred cceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCH
Confidence 445588777777773 33333223333333321 11 113688899988754 5899999888777777
Q ss_pred cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 289 DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 289 ~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
+.+..|.++|+++|+++|.||++.||... | ..+.....++ |++++. |.+.+..+.|+.+++++-.. .
T Consensus 227 eFl~~L~k~C~~~~vl~I~DEV~tG~gR~-----g---~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~kV~~-~ 295 (433)
T KOG1401|consen 227 EFLIGLRKECDDNGVLLIFDEVQTGLGRL-----G---YGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRDKVAE-M 295 (433)
T ss_pred HHHHHHHHHHhhcCceEEeehhhhCcccc-----c---hHHHHHHhCcCCcceeeh--hhccCCceeEEEeehHHHHh-h
Confidence 56889999999999999999999987431 2 2333333344 777766 88767788899888876432 2
Q ss_pred cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 367 QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 367 ~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
...-.+-+.|++|+..++++ .++..+|+.+......+++.++...+++++.+
T Consensus 296 i~~~~~l~hg~Tf~gnpLac-------sa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 296 ISPGDHLYHGGTFSGNPLAC-------SAGIKVLDELKDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred cCCCCccccCcccCCChhhh-------hHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 11112334577766666655 56778899999999999998888888877764
No 343
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=5.6e-13 Score=132.89 Aligned_cols=244 Identities=16% Similarity=0.078 Sum_probs=149.8
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++.+++.+.+...... + .....+++.++.+.++ ..++..++++++|+||+..+++.++....
T Consensus 46 ~p~v~~a~~~~~~~~~~~-~-----~~~~~~~~~~la~~l~----~~~~~~~~~~~SGseA~~~Al~~ar~~~~------ 109 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHS-P-----NLYLNSLQEEVAQKLI----GDKDYLAFFCNSGAEANEAAIKIARKATG------ 109 (375)
T ss_pred CHHHHHHHHHHHHhcCcc-c-----CccCCHHHHHHHHHHh----cCcCCEEEEcCccHHHHHHHHHHHHHhcC------
Confidence 788999999988764221 1 1122334444444332 23333468999999999999999875422
Q ss_pred CCeEEEeCCCchh-HHHHHHHcCCEEE---------EEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccccc----C
Q psy10210 225 LPEIVLPTTAHPA-FDKAANYFGMKVK---------HIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMD----D 290 (435)
Q Consensus 225 ~~~viv~~~~~~~-~~~~~~~~g~~v~---------~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~----~ 290 (435)
+++|++.+..|++ ...++...|.+.. .++.. -..|++++++.+.+++++|+++++++++|.+. .
T Consensus 110 ~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~~ 187 (375)
T PRK04260 110 KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKDF 187 (375)
T ss_pred CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHHH
Confidence 3458887777665 3344433332211 11110 12489999999888889999999999999983 4
Q ss_pred HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccc
Q psy10210 291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFV 370 (435)
Q Consensus 291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~ 370 (435)
++++.++|+++|+++++|++|.++.. .|.. ..+.......|++ ++.|.+.+...+|+++.++ ++.+..
T Consensus 188 l~~~~~l~~~~~~~~i~De~~~g~g~-----~g~~-~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~-~~~~~~--- 255 (375)
T PRK04260 188 VKALADYCQETGILLIVDEVQTGMGR-----TGKL-YAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKS-SLGGAF--- 255 (375)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCc-----ccch-hhhHhhCCCCCEE--EecccccCCcceEEEEEcH-HHHhhc---
Confidence 89999999999999999999987532 1211 0111111124655 4569754335678877764 443221
Q ss_pred cCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 371 TSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 371 ~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
......+ +..+ +....+++.++++.+..+++.+++++..+.+++.+.+
T Consensus 256 ~~~~~~~-----t~~~--~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (375)
T PRK04260 256 GYGSHGS-----TFGG--NKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQK 303 (375)
T ss_pred CCCCCCC-----CCCc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1111111 2222 2223456777788877778888888877777766654
No 344
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.55 E-value=3.9e-13 Score=136.82 Aligned_cols=267 Identities=14% Similarity=0.119 Sum_probs=168.0
Q ss_pred CCCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCC--CceEEcCC
Q psy10210 127 RGHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPE--TCGCMTSG 201 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~--~~~~~t~g 201 (435)
.++..|.+...+++.. +++|++.+++.+.+.+....... ....+.+.++.+.+++++..... ..++++++
T Consensus 55 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~-----~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL-----DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred CCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc-----ccCCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence 3455555544443332 34899999999988752111110 12346667788888888753321 13466689
Q ss_pred hHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCCcc--------c
Q psy10210 202 GTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSSYT--------V 260 (435)
Q Consensus 202 gteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~~~--------~ 260 (435)
|+||+..|++.++.... +++|+....+|++....+... + ..+..+|....+. -
T Consensus 130 GsEAve~AlklAr~~tg------r~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK06931 130 GADAVEAAIKLAKTYTG------RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA 203 (459)
T ss_pred cHHHHHHHHHHHHHhcC------CCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchh
Confidence 99999999999886532 456898888888866554422 1 1233444322111 1
Q ss_pred cHHHH----HHHhh------cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 261 DLAAL----QSAIT------GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 261 d~~~l----~~~i~------~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
+.+.+ ++.+. +++.+|++.......|.+ +.++++.++|++||+++|.||++.||-. .|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGR-----tG--- 275 (459)
T PRK06931 204 GVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFAR-----TG--- 275 (459)
T ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCc-----Cc---
Confidence 22322 33332 247888888777666765 5699999999999999999999998732 12
Q ss_pred CCCCCCCCC--ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhc
Q psy10210 327 PPFDFSLPG--VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFG 404 (435)
Q Consensus 327 ~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g 404 (435)
..+.+...| .|+++++ |.+.+..++|+++.++ ++ +. +.+...+++|+..+ .+.+++.++|+.+.
T Consensus 276 ~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~-~~-~~---~~~~~~~~T~~gnp-------la~aaala~L~~l~ 341 (459)
T PRK06931 276 KMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK-EF-DA---WQPGGHTGTFRGNQ-------LAMATGLTTLKILK 341 (459)
T ss_pred hHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH-HH-hh---ccCCCCCCCCCCCH-------HHHHHHHHHHHHHH
Confidence 233333334 4888886 7655556678866553 33 21 12222333333222 33478889999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q psy10210 405 FEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 405 ~~g~~~~~~~~~~~~~~~~~~l 426 (435)
++++.+++++..+++.+.++++
T Consensus 342 ~~~l~~~~~~~G~~l~~~L~~l 363 (459)
T PRK06931 342 EENLAQNAAERGEWLKAQLAEL 363 (459)
T ss_pred hCCHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888765
No 345
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.55 E-value=3.8e-13 Score=133.57 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=126.7
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH-HHHcCCE
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA-ANYFGMK 248 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~-~~~~g~~ 248 (435)
.|.+.++|. .+++++|.+ .++.|++||.|+.+++.....+|+ ++ +...|.....+ ....|+.
T Consensus 77 d~s~~~LE~----~vAe~lG~e---~aV~v~sGTaAl~ll~~l~v~pGd---------~V-p~n~~f~Tt~ahI~~~Ga~ 139 (460)
T PRK13237 77 SRNFYHLEE----TVQEYYGFK---HVVPTHQGRGAENLLSRIAIKPGQ---------YV-PGNMYFTTTRYHQELNGGI 139 (460)
T ss_pred CCcHHHHHH----HHHHHHCCC---eEEEeCCHHHHHHHHHHhCCCCcC---------EE-CCccchHhhHHHHHhCCcE
Confidence 355666665 456667764 579999999999986544333333 33 55556655555 7777886
Q ss_pred EEEEec----------CCCccccHHHHHHHhhcC----ceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210 249 VKHIRL----------TSSYTVDLAALQSAITGN----TVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 249 v~~vp~----------~~~~~~d~~~l~~~i~~~----~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~ 310 (435)
.+.++. ..+|.+|+++++++|+++ +.++.+..++|..| .. +++++|.++|++||++||.|+|
T Consensus 140 fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaA 219 (460)
T PRK13237 140 FVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDAT 219 (460)
T ss_pred EEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECc
Confidence 555531 146889999999999753 45677777788774 44 5899999999999999999999
Q ss_pred ccchhhhccc--ccCCCCCCCC----CCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCC
Q psy10210 311 LGGFLAPFMS--AAGYPLPPFD----FSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPG 376 (435)
Q Consensus 311 ~~~~~~~~~~--~~g~~~~~~d----~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~g 376 (435)
+......|.+ ..|+...+.. -.....|.+++|+||.+.+|.| |+++++++++.++.......|.|
T Consensus 220 ra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG 290 (460)
T PRK13237 220 RCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVYEG 290 (460)
T ss_pred chhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhccccCC
Confidence 8654222221 1223222211 0012369999999999888775 88899999887765444445544
No 346
>KOG0053|consensus
Probab=99.54 E-value=1.4e-13 Score=133.22 Aligned_cols=158 Identities=22% Similarity=0.167 Sum_probs=126.4
Q ss_pred HHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHH----HHHHHcCCEEEEEecCC
Q psy10210 181 IKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFD----KAANYFGMKVKHIRLTS 256 (435)
Q Consensus 181 ~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~----~~~~~~g~~v~~vp~~~ 256 (435)
.+.++.+-|+. ..+++++|..|+..++..+...++. |++.+..|.... +....+|++...+.++
T Consensus 83 e~~iaal~ga~---~~l~fsSGmaA~~~al~~L~~~g~~--------iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~- 150 (409)
T KOG0053|consen 83 ESGIAALEGAA---HALLFSSGMAAITVALLHLLPAGDH--------IVATGDVYGGTLRILRKFLPKFGGEGDFVDVD- 150 (409)
T ss_pred HHHHHHHhCCc---eEEEecccHHHHHHHHHHhcCCCCc--------EEEeCCCcccHHHHHHHHHHHhCceeeeechh-
Confidence 34556666554 4788899999999999999977776 999998888854 4455668888888764
Q ss_pred CccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc
Q psy10210 257 SYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV 336 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv 336 (435)
|++++++++.++|++|++..|+||+..+-||++|+++|+++|+.++||+..+++.. .+....|+
T Consensus 151 ----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~------------~~pL~lGA 214 (409)
T KOG0053|consen 151 ----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN------------QDPLPLGA 214 (409)
T ss_pred ----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc------------cChhhcCC
Confidence 68899999999999999999999999999999999999999999999999876522 34445589
Q ss_pred cEEEecCCCCCCccCC--cEEEEEeCCccccc
Q psy10210 337 TSISVDTHKYGFTPKG--SSVVLYRDLKYKHC 366 (435)
Q Consensus 337 d~~~~s~hK~~~~p~g--~g~il~~~~~~~~~ 366 (435)
|+++-|..||+.|-.. .|+++.+.+++.+.
T Consensus 215 DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~ 246 (409)
T KOG0053|consen 215 DIVVHSATKYIGGHSDVIGGSVVLNSEELASR 246 (409)
T ss_pred CEEEEeeeeeecCCcceeeeEEecCcHHHHHH
Confidence 9999999999766533 36656655665544
No 347
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=3.6e-13 Score=135.90 Aligned_cols=274 Identities=13% Similarity=-0.004 Sum_probs=169.1
Q ss_pred CCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
++..|.+...+.++ -+++|++.+++.+++.+..+... .....+.+.++.+.+++++...- +.++++++|+|
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-----~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGse 115 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-----GGFTHEPAVELAQKLLEILPPSL-NKIFFADSGSV 115 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-----cccCCHHHHHHHHHHHhhCCCCc-CEEEEeCCchH
Confidence 45555554433222 23489999999999887432211 11123556778888888774322 48999999999
Q ss_pred HHHHHHHHHHHHhhhhcCC-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHH
Q psy10210 205 SIMMACKAYRDYAREEKGI-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLA 263 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~ 263 (435)
|+..|++.++..... +|. .+++|+....+|++..-.+... +- .+..+|.... . .-+++
T Consensus 116 Ave~AlklAr~~~~~-~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 194 (429)
T PRK06173 116 AVEVAMKMALQYQQA-KGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHH-hCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence 999999999876543 342 3567888888888743222111 10 1233433211 0 11466
Q ss_pred HHHHHhh---cCceEEEEeCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC
Q psy10210 264 ALQSAIT---GNTVMLVGSMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG 335 (435)
Q Consensus 264 ~l~~~i~---~~~~~v~~~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g 335 (435)
.+++.+. +++.+|+++.. +...|.+ +.++++.++|++||+++|+||++.||-. .|. .+.....|
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Gr-----tG~---~~a~~~~g 266 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGR-----TGK---LFALEHAG 266 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCc-----CCc---chHHHhcC
Confidence 6777775 46788888874 6656665 6799999999999999999999987522 232 22222223
Q ss_pred --ccEEEecCCCCCCcc-CCcEEEEEeCCcccccccc-cc-CCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHH
Q psy10210 336 --VTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYF-VT-SDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVW 410 (435)
Q Consensus 336 --vd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~-~~-~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~ 410 (435)
.|++++ .|.+.+. ..+|.++.++ ++.+.... .. ....+++ ..+ +...++++.++++.+.++++.+
T Consensus 267 v~PDiv~~--gK~l~gG~~p~~a~~~~~-~i~~~~~~~~~~~~~~~~T-----~~g--~p~~~aaa~a~l~~i~~~~~~~ 336 (429)
T PRK06173 267 VVPDIMCI--GKALTGGYLTLSATITTE-AIAQTICSGEAKCFMHGPT-----FMA--NPLACAIAAESIRLLLESPWQQ 336 (429)
T ss_pred CCCCEEEe--ehhhhCCccccceEEecH-HHHHHHhcCCCCccccCCC-----CCc--CHHHHHHHHHHHHHHHhCCHHH
Confidence 477775 4865444 3567756554 33322100 00 0112222 222 2344578889999998888899
Q ss_pred HHHHHHHHHHHHHHhc
Q psy10210 411 ICVRYHFNYKSCLQNL 426 (435)
Q Consensus 411 ~~~~~~~~~~~~~~~l 426 (435)
+++++.+++++.++++
T Consensus 337 ~~~~~g~~l~~~L~~~ 352 (429)
T PRK06173 337 NIQRIEAQLKQELAPA 352 (429)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999888877754
No 348
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.53 E-value=4.1e-13 Score=136.63 Aligned_cols=260 Identities=11% Similarity=0.021 Sum_probs=166.4
Q ss_pred CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...++++ -+++|++.+++.+.+.+... + ....+.+.++.+.+++.+.. .+.+.++++||
T Consensus 96 ~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~---~-----~~~~~~~~~lAe~l~~~~p~--~~~v~f~~SGs 165 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS---F-----GAPCLLENVLAEMVIDAVPS--VEMVRFVNSGT 165 (474)
T ss_pred CCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCC---C-----CCCCHHHHHHHHHHHHhCCC--CCEEEEeCChH
Confidence 344555444333322 22489999999999886321 1 12346677888888888743 34899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHH-Hc--CC-----------------EEEEEecCCCccccHH
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAAN-YF--GM-----------------KVKHIRLTSSYTVDLA 263 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~-~~--g~-----------------~v~~vp~~~~~~~d~~ 263 (435)
||++.|++.++.... +++|+....+|+++..... .. +. .+..+|. -|++
T Consensus 166 EA~e~AlklAR~~tg------r~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~ 234 (474)
T PLN02482 166 EACMGVLRLARAYTG------REKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLE 234 (474)
T ss_pred HHHHHHHHHHHHhcC------CCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChH
Confidence 999999999986632 3568888888888543211 10 10 0111111 2788
Q ss_pred HHHHHhh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC-
Q psy10210 264 ALQSAIT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG- 335 (435)
Q Consensus 264 ~l~~~i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g- 335 (435)
++++.+. +++.+|++.......|.+ +.+++|.++|++||+++|+||++.||-. |. .+.....|
T Consensus 235 ~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~------g~---~ga~~~~gv 305 (474)
T PLN02482 235 AVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRI------AY---GGAQEYFGI 305 (474)
T ss_pred HHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeec------Cc---chHhHHhCC
Confidence 8888886 357788888777777876 3478999999999999999999988732 11 11111122
Q ss_pred -ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHH
Q psy10210 336 -VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVR 414 (435)
Q Consensus 336 -vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~ 414 (435)
.|+++++ |.+.+..++|.++. ++++.+......+.+.+++ ..+ +...++++.++|+.+..++..+++++
T Consensus 306 ~PDi~t~g--K~lggG~Pigav~g-~~ei~~~~~~~~~~~~~~T-----~~g--npl~~aAala~L~~l~~~~~~~~~~~ 375 (474)
T PLN02482 306 TPDLTTLG--KVIGGGLPVGAYGG-RREIMEMVAPAGPMYQAGT-----LSG--NPLAMTAGIHTLKRLQQPGTYEYLDK 375 (474)
T ss_pred CCCEEEec--chhhCCCceEEEEE-cHHHHHhhccCCCcccccC-----cch--hHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 4777664 87655566788654 4555433111111122222 222 22334678889999988888899988
Q ss_pred HHHHHHHHHHhc
Q psy10210 415 YHFNYKSCLQNL 426 (435)
Q Consensus 415 ~~~~~~~~~~~l 426 (435)
+.+.+++.++++
T Consensus 376 ~g~~l~~~L~~l 387 (474)
T PLN02482 376 ITKKLIQGILEA 387 (474)
T ss_pred HHHHHHHHHHHH
Confidence 888888877654
No 349
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=2.6e-13 Score=132.95 Aligned_cols=202 Identities=23% Similarity=0.231 Sum_probs=140.5
Q ss_pred HHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH----HHHHHHcCCEEEEEecCCCc
Q psy10210 183 MCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF----DKAANYFGMKVKHIRLTSSY 258 (435)
Q Consensus 183 ~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~----~~~~~~~g~~v~~vp~~~~~ 258 (435)
.++.+-|+ +..+.+++|..||..++.++.++||. |++++..|.+. .+....+|+++..++..
T Consensus 71 ~~a~LEg~---~~~~afsSGmaAI~~~~l~ll~~GD~--------vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~--- 136 (396)
T COG0626 71 ALAELEGG---EDAFAFSSGMAAISTALLALLKAGDH--------VLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG--- 136 (396)
T ss_pred HHHHhhCC---CcEEEecCcHHHHHHHHHHhcCCCCE--------EEecCCccchHHHHHHHHHHhcCeEEEEECCC---
Confidence 45555544 35789999999999999999988887 99999988884 44455678888887642
Q ss_pred cccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc
Q psy10210 259 TVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT 337 (435)
Q Consensus 259 ~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd 337 (435)
+.++.++++. ++|++|++..|+||+-.+.||++|+++|+++|+.++||..++..++ ..|++ .|+|
T Consensus 137 --~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~---------q~PL~---~GaD 202 (396)
T COG0626 137 --DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL---------QRPLE---LGAD 202 (396)
T ss_pred --ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccc---------cChhh---cCCC
Confidence 4556666776 5999999999999999999999999999999999999999876443 12444 4899
Q ss_pred EEEecCCCCCCccCC--cEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHH
Q psy10210 338 SISVDTHKYGFTPKG--SSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRY 415 (435)
Q Consensus 338 ~~~~s~hK~~~~p~g--~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~ 415 (435)
+++-|..||+.|-.. .|+++.+++++.+..+.......|.. .. .-.+|..++-+ ..+.-|+++.
T Consensus 203 IVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~----------l~--p~dA~l~lRGl--kTL~~Rm~~~ 268 (396)
T COG0626 203 IVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAV----------LS--PFDAWLLLRGL--RTLALRMERH 268 (396)
T ss_pred EEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCC----------CC--HHHHHHHHhcc--chHHHHHHHH
Confidence 999999999766543 25545556555443222111112221 00 12466665544 4555556555
Q ss_pred HHHHHHHHHhc
Q psy10210 416 HFNYKSCLQNL 426 (435)
Q Consensus 416 ~~~~~~~~~~l 426 (435)
.+.+.+..+.|
T Consensus 269 ~~nA~~IA~~L 279 (396)
T COG0626 269 NENALKIAEFL 279 (396)
T ss_pred HHHHHHHHHHH
Confidence 55555444433
No 350
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.52 E-value=8e-13 Score=133.85 Aligned_cols=251 Identities=14% Similarity=0.019 Sum_probs=151.5
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+..+.... ........++.+.+++..+.+....++++++|+||+..|++.++....
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~----- 127 (425)
T PRK08088 58 LHPKVVAAVEAQLKKLSHTCFQ-----VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATK----- 127 (425)
T ss_pred CCHHHHHHHHHHHhhCCCcccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhC-----
Confidence 5899999999998864322110 011233447777788877644334788999999999999999876532
Q ss_pred CCCeEEEeCCCchhHHHHHHHcCCEE--------------EE--EecCCCc-cc--cHHHHHHHhh-----cCceEEEEe
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYFGMKV--------------KH--IRLTSSY-TV--DLAALQSAIT-----GNTVMLVGS 279 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~g~~v--------------~~--vp~~~~~-~~--d~~~l~~~i~-----~~~~~v~~~ 279 (435)
++.|+..+++|++....+...+... .. +|.+.++ .. +++++++++. ++.++|+++
T Consensus 128 -r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~E 206 (425)
T PRK08088 128 -RSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIE 206 (425)
T ss_pred -CCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEEC
Confidence 3457877999988765555543221 11 2222111 11 1556888775 356777777
Q ss_pred CCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCc
Q psy10210 280 MPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGS 353 (435)
Q Consensus 280 ~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~ 353 (435)
......|.+ +.+++|.++|++||+++|+||+|+++... | ..+.+...+ +|+. ++.|.+.+...+
T Consensus 207 pi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~-----g---~~~~~~~~~~~pdi~--s~sK~l~~G~ri 276 (425)
T PRK08088 207 PVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT-----G---TLFAMEQMGVAADLT--TFAKSIAGGFPL 276 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC-----c---chhHHhhcCCCCCEE--EEeccccCCCcc
Confidence 655544555 45999999999999999999999975321 2 111111122 3544 456986555678
Q ss_pred EEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 354 SVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 354 g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
|+++.+ +++.+.. .....+. +..+ +....+++.++++.+..+.+.+++++..+.++..++.+
T Consensus 277 g~v~~~-~~~~~~~---~~~~~~~-----t~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 338 (425)
T PRK08088 277 AGVTGR-AEVMDAI---APGGLGG-----TYAG--NPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAI 338 (425)
T ss_pred eeeEec-HHHHhhc---CCCCCCC-----CCCc--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 996664 3443321 1111111 1222 22233456666777766777777777777776666544
No 351
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.51 E-value=5.9e-14 Score=133.81 Aligned_cols=193 Identities=19% Similarity=0.240 Sum_probs=132.5
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
+.|++++++++..... .. +...+.+. ++.+.++++||.+ ..+++.+||.|+.+++++...++..
T Consensus 7 ~~~~m~~a~~~a~~gd---~~--Yg~D~~~~----~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~~~~~~~---- 70 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD---DA--YGEDPTTA----RLEERIAELFGKE---AALFVPSGTMANQLALRAHLRPGES---- 70 (290)
T ss_dssp S-HHEEHHHHHTTSB----CC--TTSSHHHH----HHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHHHHTTEE----
T ss_pred CCHHHHHHHHccccCC---cc--cCCChhHH----HHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHHHhcCCc----
Confidence 5666777764433211 11 22223333 4445677788775 4579999999999999999977766
Q ss_pred CCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhc------CceEEEEeCCCCCc-ccc---cC
Q psy10210 224 SLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITG------NTVMLVGSMPNFPY-GTM---DD 290 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~------~~~~v~~~~p~npt-G~~---~~ 290 (435)
|++.+++|..+... ....|.+++.+|.+++|.+|++++++++.+ ++++|++++++|.. |++ ++
T Consensus 71 ----vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~e 146 (290)
T PF01212_consen 71 ----VICADTAHIHFDETGAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEE 146 (290)
T ss_dssp ----EEEETTEHHHHSSTTHHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHH
T ss_pred ----eeccccceeeeeccchhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHH
Confidence 99999998875432 355799999999876699999999999965 57899999999964 655 78
Q ss_pred HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 291 IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 291 i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
+++|.++|++||+++|.|.+--.-..... +. .+-+. ..++|+++++++|.+++|.| ++ ++.++++.
T Consensus 147 l~ai~~~a~~~gl~lhmDGARl~~a~~~~---~~--~~~e~-~~~~D~v~~~~tK~~g~~~G-av-l~~~~~~i 212 (290)
T PF01212_consen 147 LRAISELAREHGLPLHMDGARLANAAAAL---GV--SLAEI-AAGADSVSFGGTKNGGAPGG-AV-LAGNKEFI 212 (290)
T ss_dssp HHHHHHHHHHHT-EEEEEETTHHHHHCHH---HH--HHHHH-HTTSSEEEEETTSTT-SSSE-EE-EEESHHHH
T ss_pred HHHHHHHHHhCceEEEEehhhHHHhhhcc---cc--cHHHH-hhhCCEEEEEEEcccccccc-eE-EEechHHH
Confidence 99999999999999999998532221100 10 01122 25689999999999766654 44 55656643
No 352
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.4e-12 Score=120.71 Aligned_cols=231 Identities=16% Similarity=0.117 Sum_probs=162.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC-Cchh----HHHHHHH
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT-AHPA----FDKAANY 244 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~-~~~~----~~~~~~~ 244 (435)
.+....+-..+-..++.+.|+.+. +++++.+.+--++-.+.+...+.. +..||+++. +++. ....+..
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~-Evvv~dtts~nl~k~L~aalr~~~------~r~vIv~E~~~fpTdly~a~g~~~~ 143 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAG-EVVVTDTTSINLFKVLAAALRPQE------GRRVIVSEGDNFPTDLYIAEGLADL 143 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCC-ceEEeCCcchHHHHHHHHHhccCC------CceEEeecCCCCCcchhhhcchhhh
Confidence 345567777888899999999887 788888888777777777654332 223666664 4443 3344444
Q ss_pred cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
.+.. .+-.+.+.+.++++++++++..|++++.+.-||..-++.+|.++++++|++++-|-|++.+.+
T Consensus 144 ~~~~-----~~~~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav-------- 210 (407)
T COG3844 144 LGIG-----YDLEGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV-------- 210 (407)
T ss_pred hccc-----ccceeeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc--------
Confidence 4433 222345678899999999999999999999999999999999999999999999999987665
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--------C-----CCCccccCCCch
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--------Y-----GSPSVSGSRSGG 391 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--------~-----~~~~~~gsr~~~ 391 (435)
|.+....|+|+-+.++|||+.+.+|.-..++-.++..+........|.|.. | ...-..|+.+..
T Consensus 211 ---p~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~ 287 (407)
T COG3844 211 ---PVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVL 287 (407)
T ss_pred ---ceeecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchh
Confidence 788888999999999999988766654445555565555434445565532 1 011223455556
Q ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210 392 IIATCWAAMMYFGFEAQVWICVRYHFNYKSCL 423 (435)
Q Consensus 392 ~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~ 423 (435)
.+++...+|..+..-++.+.-++........+
T Consensus 288 s~aal~~aLDifa~~~i~~lR~kSlaLTd~fi 319 (407)
T COG3844 288 SLAALEGALDIFADVDITELRKKSLALTDYFI 319 (407)
T ss_pred hhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHH
Confidence 66777777877766665555555444444333
No 353
>KOG1368|consensus
Probab=99.49 E-value=1.1e-13 Score=126.33 Aligned_cols=208 Identities=19% Similarity=0.205 Sum_probs=144.1
Q ss_pred ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-Hhhh
Q psy10210 141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YARE 219 (435)
Q Consensus 141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~ 219 (435)
+.....++|++++++.-.. .-+ ..-|...++|. .+|+++|-. -++|+++||.++.+++++-+. ++.
T Consensus 31 vT~PTdeMr~am~eA~vgD---dVy--GeD~tt~rLE~----~vA~l~GKE---AgLFv~SGTmgNllaIm~Hc~~rg~- 97 (384)
T KOG1368|consen 31 VTVPTDEMRRAMAEASVGD---DVY--GEDPTTNRLEQ----RVAELFGKE---AGLFVPSGTMGNLLAIMVHCHQRGS- 97 (384)
T ss_pred ccCChHHHHHHHhhcccCc---ccc--cCCccHHHHHH----HHHHHhCcc---ceeeecccccccHHHHHHHhcCCCc-
Confidence 4445678888887654321 111 11245667666 456677654 468888899999999999876 444
Q ss_pred hcCCCCCeEEEeCCCchhHHHH---HHHcCCEEEEEecCCCccccHHHHHHHhhc--------CceEEEEeCCCCCcc-c
Q psy10210 220 EKGISLPEIVLPTTAHPAFDKA---ANYFGMKVKHIRLTSSYTVDLAALQSAITG--------NTVMLVGSMPNFPYG-T 287 (435)
Q Consensus 220 ~~g~~~~~viv~~~~~~~~~~~---~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~--------~~~~v~~~~p~nptG-~ 287 (435)
+||+.+.+|--..+. +...|+.++.+...+++.+|++++++++.. .|++|++.+-+|.+| .
T Consensus 98 -------eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~ 170 (384)
T KOG1368|consen 98 -------EIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGK 170 (384)
T ss_pred -------eEEeccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCce
Confidence 499999988774433 344588888888778999999999999962 379999999998888 5
Q ss_pred c---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 288 M---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 288 ~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
+ +.++++.++|+++|+.+|.|.+--.-.. -..|. |+.--..-.|++++..+|.+++|.|+ +++.++++.
T Consensus 171 vlPle~~~~v~~lak~~glkLH~DGARi~NAa---vasgV---~vk~i~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI 242 (384)
T KOG1368|consen 171 VLPLEELDRVKALAKRHGLKLHMDGARIFNAA---VASGV---PVKKICSAFDSVSICLSKGLGAPVGS--VIVGSKDFI 242 (384)
T ss_pred EeeHHHHHHHHHHHhccCCeeecchhhhhhHH---HHcCC---CHHHHHHhhhhhhhhhhccCCCCccc--EEEccHHHH
Confidence 5 6778889999999999999997421110 11122 11111123599999999998888863 578888887
Q ss_pred cccccccCCCCC
Q psy10210 365 HCQYFVTSDWPG 376 (435)
Q Consensus 365 ~~~~~~~~~~~g 376 (435)
.....+....-|
T Consensus 243 ~kA~~~RKalGG 254 (384)
T KOG1368|consen 243 DKARHFRKALGG 254 (384)
T ss_pred HHHHHHHHHhcC
Confidence 665444444333
No 354
>PLN02452 phosphoserine transaminase
Probab=99.49 E-value=7.5e-13 Score=130.44 Aligned_cols=231 Identities=10% Similarity=0.005 Sum_probs=154.9
Q ss_pred CCcChhHHHHHHHHHHHHHHHhCCCCCC-ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh--HHHHHH
Q psy10210 167 PDIFPGVCKMEAEVIKMCARMFNGGPET-CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA--FDKAAN 243 (435)
Q Consensus 167 ~~~~~~~~~~e~~~~~~la~l~g~~~~~-~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~--~~~~~~ 243 (435)
.+..+.+.++..++++.+.++++.+.+. .++++.|||.++.+++..+..++++ +++-...+.+ +.+.++
T Consensus 44 sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~--------~l~~~~G~fg~r~~~~a~ 115 (365)
T PLN02452 44 SHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDK--------ADFVVTGSWSKKAAKEAK 115 (365)
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCe--------EEEEECCHHHHHHHHHHH
Confidence 3557788899999999999999986543 4566689999999999998876655 6666666666 667777
Q ss_pred HcCCEEEEEecCCC---ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210 244 YFGMKVKHIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM 319 (435)
Q Consensus 244 ~~g~~v~~vp~~~~---~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~ 319 (435)
.+|...+....... ..+++++++ .+++...|.+++..+.||+. .+++++.+ +++++|++.+.+
T Consensus 116 ~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g----- 182 (365)
T PLN02452 116 KYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFL----- 182 (365)
T ss_pred HhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCcccc-----
Confidence 78864433322221 135666652 24567899999999999994 88877753 899999997543
Q ss_pred cccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC--CCCCccccCCCchHHHHHH
Q psy10210 320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN--YGSPSVSGSRSGGIIATCW 397 (435)
Q Consensus 320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~--~~~~~~~gsr~~~~ia~~~ 397 (435)
+.++|+...++|. .+.||. +||.|+|+++++++.+.+.. ...+.+..-. ....+..++.+...+.++.
T Consensus 183 ------~~pidv~~~~v~~--~saqK~-lGP~Gl~~v~vr~~~l~~~~-~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~ 252 (365)
T PLN02452 183 ------SKPVDVSKYGVIY--AGAQKN-VGPSGVTIVIIRKDLIGNAR-PITPGMLDYKIHAENDSLYNTPPCFGIYMCG 252 (365)
T ss_pred ------CcccCHHHcCEEE--Eecccc-cCCCCeEEEEEcHHHHhhcc-cCCCchhhHHHHHhcCCccCChhHHHHHHHH
Confidence 3478888878755 599998 48999999888876553321 1111111000 0111233566667777777
Q ss_pred HHHHHhcHH-HHHHHHHHHHHHHHHHHHhcCC
Q psy10210 398 AAMMYFGFE-AQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 398 a~l~~~g~~-g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
++++.+..+ |+..+.++..+.++.+++.+.+
T Consensus 253 ~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~ 284 (365)
T PLN02452 253 LVFEDLLAQGGLKAMEKRNIRKADLLYDAIDE 284 (365)
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHHHHHHHh
Confidence 888877554 5666665555555555555443
No 355
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.48 E-value=1.3e-12 Score=132.50 Aligned_cols=258 Identities=13% Similarity=0.080 Sum_probs=157.4
Q ss_pred ChHhHHH--HHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--
Q psy10210 144 YQQDLVD--LLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE-- 219 (435)
Q Consensus 144 g~~~l~~--~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~-- 219 (435)
++|++.+ ++.+.+.+..+..+.. .....+...++.+.++++.+.+..+.++++++|+||++.|++.++.+...
T Consensus 62 ~~p~v~~~~ai~~ql~~l~~~~~~~---~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~ 138 (443)
T PRK08297 62 NHPALADDPEFRAELGRAALNKPSN---SDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKN 138 (443)
T ss_pred CChHHhhHHHHHHHHHHhhhhcccc---CCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccc
Confidence 4899999 9998887643211111 01123455566667777763222248999999999999999999876432
Q ss_pred -hcCC---CCCeEEEeCCCchhHHHHHHHc-CCEE-----------EEEecCC-C----c-c---------ccHHHHHHH
Q psy10210 220 -EKGI---SLPEIVLPTTAHPAFDKAANYF-GMKV-----------KHIRLTS-S----Y-T---------VDLAALQSA 268 (435)
Q Consensus 220 -~~g~---~~~~viv~~~~~~~~~~~~~~~-g~~v-----------~~vp~~~-~----~-~---------~d~~~l~~~ 268 (435)
.+|. .+.+|+....+|++....+... |... ..+|... . . . -+++++++.
T Consensus 139 ~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (443)
T PRK08297 139 EARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAA 218 (443)
T ss_pred cccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHH
Confidence 1343 2567998888888855444332 2110 0111110 0 0 0 134556666
Q ss_pred hh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEE
Q psy10210 269 IT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSI 339 (435)
Q Consensus 269 i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~ 339 (435)
+. +++.+|+++......|.+ +.+++|.++|++||+++|.||++.||-. .| ..+.+...| .|++
T Consensus 219 i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGR-----tG---~~~a~~~~gv~PDiv 290 (443)
T PRK08297 219 FERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGL-----TG---TAWAYQQLGVRPDIV 290 (443)
T ss_pred HHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCc-----cc---hHHHHHhcCCCCCEE
Confidence 75 468889888777767776 7899999999999999999999998733 12 122222222 4888
Q ss_pred EecCCCCCCccCCcEEEEEeCCcccccc--ccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210 340 SVDTHKYGFTPKGSSVVLYRDLKYKHCQ--YFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF 417 (435)
Q Consensus 340 ~~s~hK~~~~p~g~g~il~~~~~~~~~~--~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~ 417 (435)
+++ |.+ | .|.++.+++ +.... ........+++| .+ +....+++.++++.+.++++.++++++.+
T Consensus 291 ~~g--K~l--~--~~a~l~~~~-i~~~~~~~~~~~~~~~~T~-----~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~ 356 (443)
T PRK08297 291 AFG--KKT--Q--VCGIMAGRR-VDEVEDNVFAVSSRINSTW-----GG--NLVDMVRARRILEVIEEDGLVENAARQGE 356 (443)
T ss_pred Eec--ccc--c--ccceecchH-HHHhhhhhccCccccCCCC-----Cc--cHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 765 763 3 334355543 11100 000011122222 22 22334678888999988899999999999
Q ss_pred HHHHHHHhc
Q psy10210 418 NYKSCLQNL 426 (435)
Q Consensus 418 ~~~~~~~~l 426 (435)
.+.+.++++
T Consensus 357 ~l~~~L~~l 365 (443)
T PRK08297 357 YLLARLEEL 365 (443)
T ss_pred HHHHHHHHH
Confidence 888877764
No 356
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=1.7e-12 Score=130.96 Aligned_cols=265 Identities=12% Similarity=-0.043 Sum_probs=161.3
Q ss_pred CCCCCCCCCcccccc---cCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 127 RGHYDWKHGRVSGAV---YYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 127 ~~~~~~~~~~~~~~~---~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
.+++.|.+...+++. -+++|++.+++.+++.+.. .. ....+.+.++.+.++++++... +.+.++++|+
T Consensus 50 ~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~---~~-----~~~~~~~~~la~~L~~~~~~~~-~~v~f~~SGs 120 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGT---SY-----GLTSEQEILFAEELFSYLGLED-HKIRFVSSGT 120 (433)
T ss_pred CCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCC---CC-----CCCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence 344555444333332 2358999999999987632 11 1123456677788888875432 4899999999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH---HHHc-CCE---EEEE---e-cCCC----ccccHHHHHHH
Q psy10210 204 ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA---ANYF-GMK---VKHI---R-LTSS----YTVDLAALQSA 268 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~---~~~~-g~~---v~~v---p-~~~~----~~~d~~~l~~~ 268 (435)
||+..|++.++.... +++|+....+|++.... +... +-. .... + .... ..-|++++++.
T Consensus 121 EA~e~AiklAr~~tg------r~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 194 (433)
T PRK00615 121 EATMTAVRLARGITG------RSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTV 194 (433)
T ss_pred HHHHHHHHHHHHhhC------CCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHH
Confidence 999999999886532 35688888888875311 1111 100 0000 0 0000 01267888888
Q ss_pred hh---cCceEEEEeCCCCCccccc----CHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEE
Q psy10210 269 IT---GNTVMLVGSMPNFPYGTMD----DIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSI 339 (435)
Q Consensus 269 i~---~~~~~v~~~~p~nptG~~~----~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~ 339 (435)
+. +++.+|++.......|.+. .+++|.++|++||+++|+||++.|| .. |. .+..... ..|++
T Consensus 195 l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~-----G~---~ga~~~~gv~PDi~ 265 (433)
T PRK00615 195 MNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RV-----AQ---GGAAAIYHVKPDIT 265 (433)
T ss_pred HHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cc-----cH---hHHHHhcCCCCCeE
Confidence 75 3567888887777678763 3679999999999999999999877 21 11 1111112 24777
Q ss_pred EecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy10210 340 SVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY 419 (435)
Q Consensus 340 ~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~ 419 (435)
++ .|.+.+...+|+++.++ ++.+........+.++++ .+ +...++++.++++.+.++++.+++++..+.+
T Consensus 266 ~~--gK~lggG~p~~av~~~~-~i~~~~~~~~~~~~~~T~-----~g--~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l 335 (433)
T PRK00615 266 VY--GKILGGGLPAAAVVAHK-SIMDHLAPEGTIFQAGTL-----SG--NPLAMAAGKASINLCREQGFYTQLSTLEQNF 335 (433)
T ss_pred EE--cccccCCcceeeeeecH-HHHhhhcCCCCcccCCCC-----cc--cHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 65 48754444567756554 443321110111222222 22 3334578889999998888888988888888
Q ss_pred HHHHHh
Q psy10210 420 KSCLQN 425 (435)
Q Consensus 420 ~~~~~~ 425 (435)
++.+++
T Consensus 336 ~~~l~~ 341 (433)
T PRK00615 336 LSPIEE 341 (433)
T ss_pred HHHHHH
Confidence 666654
No 357
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.47 E-value=5.2e-12 Score=127.66 Aligned_cols=260 Identities=14% Similarity=0.039 Sum_probs=159.1
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
+++|++.+++.+.+.+....... ....+...++.+.++++++.+- +.+.++++|+||+..|++..+..... +|
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~-----~~~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~~~-~~ 133 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFG-----GFTHKPAIELCQKLVKMTPNAL-DCVFLADSGSVAVEVALKMALQYWQA-KG 133 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-----ccCCHHHHHHHHHHHhhCCCCC-CEEEEeCCcHHHHHHHHHHHHHHHHh-hC
Confidence 45899999999998874322110 1112345667777888774332 48999999999999999998876533 33
Q ss_pred C-CCCeEEEeCCCchhHHHHHHHc-CC-------------EEEEEecCCC-c-----cccHHHHHHHhh---cCceEEEE
Q psy10210 223 I-SLPEIVLPTTAHPAFDKAANYF-GM-------------KVKHIRLTSS-Y-----TVDLAALQSAIT---GNTVMLVG 278 (435)
Q Consensus 223 ~-~~~~viv~~~~~~~~~~~~~~~-g~-------------~v~~vp~~~~-~-----~~d~~~l~~~i~---~~~~~v~~ 278 (435)
. .+.+|+....+|++....+... +- ....+|.... + .-|++++++.+. +++++|++
T Consensus 134 ~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaaviv 213 (427)
T TIGR00508 134 EKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVIL 213 (427)
T ss_pred CCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 3 2467888888888754333222 21 1112222110 1 115677777775 35677777
Q ss_pred eCC-CCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEEEecCCCCCCcc-
Q psy10210 279 SMP-NFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSISVDTHKYGFTP- 350 (435)
Q Consensus 279 ~~p-~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~~~s~hK~~~~p- 350 (435)
+.. +...|.+ +++++|.++|++||+++|+||++.|+.. .|. .+..... ..|++++ .|.+.+.
T Consensus 214 EPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr-----~G~---~~~~~~~~v~pDi~~~--gK~l~gG~ 283 (427)
T TIGR00508 214 EPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGR-----TGK---LFACEHAGVVPDILCV--GKALTGGY 283 (427)
T ss_pred echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc-----CCc---cchhhhcCCCCCEEEe--chhhhcCc
Confidence 764 5544543 7899999999999999999999977522 221 2222222 3477775 5875444
Q ss_pred CCcEEEEEeCCccccccccc-cCCC-CCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 351 KGSSVVLYRDLKYKHCQYFV-TSDW-PGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 351 ~g~g~il~~~~~~~~~~~~~-~~~~-~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
..++.++.++ ++.+..... ...+ .+ .|..+ +...++++.++++.+..+++.+++++..+++++.++++.
T Consensus 284 ~p~~a~~~~~-~~~~~~~~~~~~~~~~~-----~T~~g--~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~ 354 (427)
T TIGR00508 284 MTLSATVTTD-KVAQTISSGEAGCFMHG-----PTFMG--NPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLR 354 (427)
T ss_pred ccceEEEEcH-HHHHHHhcCCCCccccC-----CCCCc--CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhh
Confidence 3567755554 333221000 0111 12 22222 234456888899988887888999988888888777654
No 358
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.46 E-value=2e-12 Score=130.96 Aligned_cols=244 Identities=13% Similarity=0.037 Sum_probs=154.8
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|.+.+++.+++.+.. ... ...+.+.++.+++++++.. . +.++++++|+||+..+++.++....
T Consensus 67 ~~p~i~~a~~~~~~~~~--~~~------~~~~~~~~la~~L~~~~~~-~-~~v~~~~sGseA~e~Aik~a~~~~g----- 131 (426)
T PRK00062 67 AHPEVVEAVIEAAEKGL--SFG------APTELEVELAELVIELVPS-I-EMVRMVNSGTEATMSAIRLARGYTG----- 131 (426)
T ss_pred CCHHHHHHHHHHHHhCC--cCC------CCCHHHHHHHHHHHHhCCC-C-CEEEEecCHHHHHHHHHHHHHHHhC-----
Confidence 58999999999987621 111 1235556788888887632 2 3799999999999999999886622
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-CC------------EEE-----EEecCCCccccHHHHHHHhh---cCceEEEEeCCC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-GM------------KVK-----HIRLTSSYTVDLAALQSAIT---GNTVMLVGSMPN 282 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g~------------~v~-----~vp~~~~~~~d~~~l~~~i~---~~~~~v~~~~p~ 282 (435)
+++|+..+++|++....+... |. ..+ .+++. .-|++++++.+. +++++|+++...
T Consensus 132 -~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~i~~~~~~~aaiivEpv~ 207 (426)
T PRK00062 132 -RDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAP---YNDLEAVEELFEEYGDEIAAVIVEPVA 207 (426)
T ss_pred -CCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcC---CCCHHHHHHHHHhCCCcEEEEEEeCCc
Confidence 346999999999976443332 10 000 01111 137888888885 367888888666
Q ss_pred CCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCCCccCCcEEE
Q psy10210 283 FPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYGFTPKGSSVV 356 (435)
Q Consensus 283 nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~~~p~g~g~i 356 (435)
..+|.+.+ +++|.++|++||+++|+||+|.|+.. |. .+.....+ .|++ ++.|.+.+...+|++
T Consensus 208 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~------g~---~~~~~~~~~~pDi~--~~gK~l~~G~p~ga~ 276 (426)
T PRK00062 208 GNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRV------AL---GGAQGYYGVTPDLT--TLGKIIGGGLPVGAF 276 (426)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcccc------CC---ccHHHHhCCCcchH--hhhhHhhCCCcceee
Confidence 66888855 99999999999999999999987722 10 01111112 3544 445875444446775
Q ss_pred EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 357 LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 357 l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
+. ++++.+........+.+. +..+ +....+++.++++.+..+.+.+++++..+.+++.+++
T Consensus 277 ~~-~~~i~~~~~~~~~~~~~~-----T~~~--~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 277 GG-RREIMEQLAPLGPVYQAG-----TLSG--NPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKE 337 (426)
T ss_pred eE-HHHHHHhhccCCCceecc-----cCcC--CHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 55 445443311011112221 1222 2223467788888887777888888888877776654
No 359
>PRK06149 hypothetical protein; Provisional
Probab=99.46 E-value=4.5e-12 Score=140.08 Aligned_cols=251 Identities=14% Similarity=0.024 Sum_probs=158.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+.+.+...... ...+...++.+.+++++.... +.++++++|+||+..|++.++....
T Consensus 600 ~hp~v~~Ai~~q~~~l~~~~~-------~~~~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~e~AlklAr~~tg----- 666 (972)
T PRK06149 600 GHPRLAAAAARQWSLLNTNSR-------FHYAAVAEFSERLAALAPDGL-DTVFLVNSGSEANDLAIRLAWAASG----- 666 (972)
T ss_pred CCHHHHHHHHHHHHhcccccc-------ccCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHHHHHHHHHHHhcC-----
Confidence 489999999998876422111 123556677788888874222 3799999999999999998876532
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-C-----C--------EEEEEecCCCcc-----cc-----HHHHHHHhh------cCc
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-G-----M--------KVKHIRLTSSYT-----VD-----LAALQSAIT------GNT 273 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g-----~--------~v~~vp~~~~~~-----~d-----~~~l~~~i~------~~~ 273 (435)
+++||..+.+|++....+... + . .+..++....+. .+ .+++++.+. +++
T Consensus 667 -r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 745 (972)
T PRK06149 667 -RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGL 745 (972)
T ss_pred -CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCce
Confidence 346888888888644332111 1 0 123333221111 11 233333332 357
Q ss_pred eEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCC--ccEEEecCCCCC
Q psy10210 274 VMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPG--VTSISVDTHKYG 347 (435)
Q Consensus 274 ~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~g--vd~~~~s~hK~~ 347 (435)
.+|++.......|.+.+ ++++.++|++||+++|+||++.||-. .|. ..+.+...| .|+++++ |.+
T Consensus 746 AavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGR-----tG~--~~~a~e~~gv~PDivt~g--K~l 816 (972)
T PRK06149 746 AGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGR-----LGH--YFWGFEQQGVVPDIITMA--KGM 816 (972)
T ss_pred EEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCc-----cCc--cchhhhhcCCCCCEEEec--ccc
Confidence 78888877776787744 99999999999999999999988732 221 012333334 4888775 875
Q ss_pred CccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcC
Q psy10210 348 FTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 348 ~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~ 427 (435)
.+...+|+++.++ ++.+... ...+.++++ .| +..+.+++.++++.+.++++.+++++..+++++.++++.
T Consensus 817 g~G~Pl~av~~~~-~i~~~~~--~~~~~~sT~-----~g--nP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~ 886 (972)
T PRK06149 817 GNGHPLGAVITRR-EIAEALE--AEGYFFSST-----GG--SPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALA 886 (972)
T ss_pred cCCeeeEEEEEcH-HHHhhhc--cCCcccCCC-----CC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 5556678877665 4432210 011111211 12 233446888999999999999999998888888887653
No 360
>PRK06148 hypothetical protein; Provisional
Probab=99.45 E-value=3.7e-12 Score=140.86 Aligned_cols=250 Identities=12% Similarity=0.032 Sum_probs=162.1
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
++|++.+++.+++.+.. .+. ....+.+.++.+.+++++..+- +.+.++++||||+..|++.++....
T Consensus 639 ~hp~v~~Ai~~q~~~l~-~~~------~~~~~~~~~lAe~L~~~~p~~~-~~v~f~nSGsEA~e~AlklAr~~tG----- 705 (1013)
T PRK06148 639 AHPRVVAAAARQAARLN-TNT------RYLHDAIVAYAERLTATLPDGL-TVAFFVNSGSEANSLALRLARAHTG----- 705 (1013)
T ss_pred CCHHHHHHHHHHHhhcC-CcC------CcCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHHHHHHHHHHHHhcC-----
Confidence 48999999999988631 111 1234566778888888874322 4789999999999999999986532
Q ss_pred CCCeEEEeCCCchhHHHHHHHc-C------------CEEEEEecCCC----cc-cc-------HHHHHHHhh------cC
Q psy10210 224 SLPEIVLPTTAHPAFDKAANYF-G------------MKVKHIRLTSS----YT-VD-------LAALQSAIT------GN 272 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~~-g------------~~v~~vp~~~~----~~-~d-------~~~l~~~i~------~~ 272 (435)
+++||....+|++....+... + -.+..++.... +. .+ .+.+++.+. ++
T Consensus 706 -r~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 784 (1013)
T PRK06148 706 -QRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRG 784 (1013)
T ss_pred -CCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCc
Confidence 346888888888854332211 1 01222221110 11 01 134555443 35
Q ss_pred ceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCC
Q psy10210 273 TVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKY 346 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~ 346 (435)
+.+|++.......|.+ +.++++.++|++||+++|.||++.||-. .|. ..+.+...|+ |+++++ |.
T Consensus 785 iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGR-----tG~--~~~a~e~~gv~PDivt~g--K~ 855 (1013)
T PRK06148 785 PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGR-----VGS--HWWAFETQGVVPDIVTMG--KP 855 (1013)
T ss_pred eEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCC-----CCC--cchhhhhcCCCcceeeec--cc
Confidence 7888888777666766 4599999999999999999999998732 121 0233333444 888775 87
Q ss_pred CCccCCcEEEEEeCCccccccccccCC-CCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 347 GFTPKGSSVVLYRDLKYKHCQYFVTSD-WPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 347 ~~~p~g~g~il~~~~~~~~~~~~~~~~-~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
+.+...+|+++.+ +++.+.. .+. ..+++|+..+ .+.+++.++++.+.++++.+++++..+++++.+++
T Consensus 856 lggG~Plgav~~~-~ei~~~~---~~g~~~~~Tf~gnp-------la~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~ 924 (1013)
T PRK06148 856 IGNGHPMGAVVTT-REIADSF---DNGMEYFNTFGGNP-------VSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRE 924 (1013)
T ss_pred ccCCcceEEEEEc-HHHHhhc---cCCCccccCCCCCH-------HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 6666778887766 4443321 111 1223333222 23478889999999999999999999998888876
Q ss_pred cC
Q psy10210 426 LS 427 (435)
Q Consensus 426 l~ 427 (435)
+.
T Consensus 925 l~ 926 (1013)
T PRK06148 925 LQ 926 (1013)
T ss_pred HH
Confidence 53
No 361
>KOG1404|consensus
Probab=99.44 E-value=1.7e-12 Score=123.04 Aligned_cols=261 Identities=15% Similarity=0.045 Sum_probs=168.6
Q ss_pred CcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHH
Q psy10210 135 GRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYR 214 (435)
Q Consensus 135 ~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~ 214 (435)
|.+.-..-+++|++.+++.+...+.+.+. +-...+-..++.+.+++++-.+-. .++++++|+||++++++.++
T Consensus 58 Gi~tvslGHchP~v~~a~~kQl~~l~H~t------~~~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGsEANelal~mar 130 (442)
T KOG1404|consen 58 GIVTVSLGHCHPDVVAAAVKQLKKLYHTT------SGYLNPPIHDLAEALVSKLPGDLK-VVFFVNSGSEANELALKMAR 130 (442)
T ss_pred CeEEEEcCCCChHHHHHHHHhhhhhEEee------ccccCCcHHHHHHHHHHhCCCCce-EEEEecCCchHHHHHHHHHH
Confidence 33334444569999999999887644332 111223344556667777754443 68999999999999999998
Q ss_pred HHhhhhcCCCCCeEEEeCCCchhHH-HHHHHcCCEEEEEecC-----------CC-------cc-----c--cHHHHHHH
Q psy10210 215 DYAREEKGISLPEIVLPTTAHPAFD-KAANYFGMKVKHIRLT-----------SS-------YT-----V--DLAALQSA 268 (435)
Q Consensus 215 ~~~~~~~g~~~~~viv~~~~~~~~~-~~~~~~g~~v~~vp~~-----------~~-------~~-----~--d~~~l~~~ 268 (435)
.+... -+||.-..+|++.. -++...|.....-+.+ ++ +. . -.+++++.
T Consensus 131 ~Yt~~------~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~ 204 (442)
T KOG1404|consen 131 LYTGN------LDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDL 204 (442)
T ss_pred HhcCC------ceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHH
Confidence 87654 24777777776643 3333334433322211 00 00 0 01334444
Q ss_pred hh----cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cE
Q psy10210 269 IT----GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TS 338 (435)
Q Consensus 269 i~----~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~ 338 (435)
+. +...+.+....+.--|++ ..+++..++|+++|..+|.||++.||.. .| .-|.|...++ |+
T Consensus 205 i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGR-----tG---~~wgfe~h~v~PDI 276 (442)
T KOG1404|consen 205 ILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGR-----TG---HMWGFESHGVVPDI 276 (442)
T ss_pred HHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccc-----cc---ccccccccCCCccH
Confidence 42 235667777777766777 4599999999999999999999999843 23 3567777776 66
Q ss_pred EEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHH
Q psy10210 339 ISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFN 418 (435)
Q Consensus 339 ~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~ 418 (435)
+++. |.+++....|.+++. +++.+-... .....-+|+..++++ +++.++++.+.+|.++++.+....+
T Consensus 277 vTmA--KgiGnG~Pl~AVvtt-~EIa~v~~~--~~~~fnTyggnP~a~-------avg~aVL~Vikee~LqE~aa~vG~y 344 (442)
T KOG1404|consen 277 VTMA--KGIGNGFPLGAVVTT-PEIADVLNQ--KSSHFNTYGGNPVAC-------AVGLAVLKVIKEENLQENAAEVGSY 344 (442)
T ss_pred HHHH--hhccCCCcceeeecC-HHHHHHHHh--ccccccccCCCchhH-------HHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 6554 876666778886665 454432111 111233344444444 6788999999999999999999999
Q ss_pred HHHHHHhcCC
Q psy10210 419 YKSCLQNLSD 428 (435)
Q Consensus 419 ~~~~~~~l~~ 428 (435)
+++.+.++.+
T Consensus 345 l~~~l~~l~d 354 (442)
T KOG1404|consen 345 LLEKLAALKD 354 (442)
T ss_pred HHHHHHHHhh
Confidence 8888877654
No 362
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.44 E-value=1.5e-11 Score=124.63 Aligned_cols=271 Identities=11% Similarity=-0.043 Sum_probs=158.3
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHH-HHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEV-FGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGT 203 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggt 203 (435)
++..|.+...+.++. +++|++.+++.+. ...... +... ...+...++.+.+.+.+++++..+- +.++++++|+
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~-~~~~-~~~~~~~~la~~l~~~l~~~~p~~~-~~v~f~~SGs 132 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI-NRPA-LGNFPSKDWAKILKEGILKVAPKGQ-DQVWTGMSGS 132 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc-cccc-CCcHHHHHHHHHHHHhHHhhCCCCc-CEEEEeCCcH
Confidence 344454443333333 3489999999984 232111 1111 1122334455555555566664222 4899999999
Q ss_pred HHHHHHHHHHHHHhhhh-cC--------------------CCCCeEEEeCCCchhHHHHHHHc-CC-----------EEE
Q psy10210 204 ESIMMACKAYRDYAREE-KG--------------------ISLPEIVLPTTAHPAFDKAANYF-GM-----------KVK 250 (435)
Q Consensus 204 eai~~a~~a~~~~~~~~-~g--------------------~~~~~viv~~~~~~~~~~~~~~~-g~-----------~v~ 250 (435)
||++.|++.++.....+ ++ -++.+||....+|++....+... +- ...
T Consensus 133 EAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~ 212 (464)
T TIGR00699 133 DANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWP 212 (464)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCce
Confidence 99999999998753221 11 12347999998888854443322 21 112
Q ss_pred EEecCC-C---c----------cccHHHHHHHhh---cCceEEEEeCCCCCcccccC----HHHHHHHHHHcCCcEEEec
Q psy10210 251 HIRLTS-S---Y----------TVDLAALQSAIT---GNTVMLVGSMPNFPYGTMDD----IGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 251 ~vp~~~-~---~----------~~d~~~l~~~i~---~~~~~v~~~~p~nptG~~~~----i~~i~~la~~~~~~livD~ 309 (435)
.+|... . . .-+++++++++. +++.+|+++......|.+.+ +++|.++|++||+++|+||
T Consensus 213 ~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DE 292 (464)
T TIGR00699 213 QAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDE 292 (464)
T ss_pred ecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEee
Confidence 222211 0 0 013566777775 35788999888777787744 9999999999999999999
Q ss_pred cccchhhhcccccCCCCCCCCCCCCC----ccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccc
Q psy10210 310 CLGGFLAPFMSAAGYPLPPFDFSLPG----VTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVS 385 (435)
Q Consensus 310 ~~~~~~~~~~~~~g~~~~~~d~~~~g----vd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~ 385 (435)
++.||-. .| ..+.+...| .|+++++ |.+.+ .|+ ++..+.+.. ..+...+++|+...
T Consensus 293 V~tGfGr-----tG---~~fa~e~~gv~~~PDi~t~g--K~lg~---gG~-~~~~~~~~~----~~~~~~~~T~~gnp-- 352 (464)
T TIGR00699 293 VQTGVGA-----TG---KFWAHEHWNLDDPPDMVTFS--KKFQT---AGY-FFHDPAFRP----NKPYRQFNTWMGDP-- 352 (464)
T ss_pred eeeCCCC-----Cc---chhHHHhcCCCCCCCEEEeh--hhhcc---CCc-cccchhccC----CCCcccccCCCCCH--
Confidence 9988733 12 122222222 5787765 76421 122 223222110 01222333332222
Q ss_pred cCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhc
Q psy10210 386 GSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 386 gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l 426 (435)
.+.+++.++++.+.++++.+++++..+++++.++++
T Consensus 353 -----~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 388 (464)
T TIGR00699 353 -----SRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDL 388 (464)
T ss_pred -----HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 234678889999988999999988888887777654
No 363
>PRK07046 aminotransferase; Validated
Probab=99.43 E-value=9.3e-12 Score=126.48 Aligned_cols=264 Identities=14% Similarity=0.025 Sum_probs=164.5
Q ss_pred CCCCCCCCccccccc---CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSGAVY---YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~~~~---~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...++++. +++|++.+++.+++.+-... ....+.+.++.+.++++++. +.+.++++|||
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~--------~~~~~~~~~lAe~l~~~~~~---~~v~F~nSGtE 141 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT--------MLPSEDAAWVGEELARRFGL---PYWQVATTATD 141 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC--------CCCCHHHHHHHHHHHHHhCC---CEEEEECCHHH
Confidence 445554433333222 23899999999998863211 12346778888888888842 47999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH--c-----------CC------EEEEEecCCCccccHHHH
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY--F-----------GM------KVKHIRLTSSYTVDLAAL 265 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~--~-----------g~------~v~~vp~~~~~~~d~~~l 265 (435)
|++.|++.+|.... +++|+....+|+++...... . |. .+..+| + -|++++
T Consensus 142 A~e~AlrlAR~~TG------r~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l 210 (453)
T PRK07046 142 ANRFVLRWARAVTG------RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAAL 210 (453)
T ss_pred HHHHHHHHHHHhhC------CCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHH
Confidence 99999999986632 45688888888885322211 0 10 011111 1 278999
Q ss_pred HHHhh-cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 266 QSAIT-GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 266 ~~~i~-~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
++.+. +++.+|+++......|.+ +.++++.++|++||+++|.||++. |-. |.+.....+ .-..|+++
T Consensus 211 ~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~------g~Gg~~~~~-gv~PDi~t 282 (453)
T PRK07046 211 EAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISS------GPGGYTRAH-GLEPDFLV 282 (453)
T ss_pred HHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-Ccc------CCcchhHHh-CCCcccee
Confidence 98885 467888888777666766 458999999999999999999986 322 111111111 11248877
Q ss_pred ecCCCCCCccCCcEEEEEeCCccccccccccC-CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHH
Q psy10210 341 VDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTS-DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNY 419 (435)
Q Consensus 341 ~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~-~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~ 419 (435)
++ |.+.+..++|+++.++ ++.+....... ...+....+.|..+ +...++++.++++.+.++++.+++++..+.+
T Consensus 283 ~g--K~lggG~Pi~av~g~~-~i~~~~~~~~~~~~~~~~~~~~T~~g--npl~~aa~~a~L~~l~~~~~~~~~~~~g~~l 357 (453)
T PRK07046 283 VG--KPIAGGVPCAVYGFSA-ELAERAQAAKASAPPGHSGIGTTLSA--NALAMAAMRATLAEVMTEAAYAHMLALAARL 357 (453)
T ss_pred eh--hhhcCCCcceeeeehH-HHHHHHhhccccCCCCCceeCCCCcc--cHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 64 8765567788866554 44332100000 00111001112222 3334578889999888778888888888888
Q ss_pred HHHHHhc
Q psy10210 420 KSCLQNL 426 (435)
Q Consensus 420 ~~~~~~l 426 (435)
.+.++.+
T Consensus 358 ~~~L~~l 364 (453)
T PRK07046 358 AAGLRAV 364 (453)
T ss_pred HHHHHHH
Confidence 7777653
No 364
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.43 E-value=6.9e-12 Score=126.25 Aligned_cols=170 Identities=16% Similarity=0.163 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 175 KMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
....|..+..|+.||.+.. -++++|.|.|+..++.+.+.+||. |+++.++|-+........|+..+++..
T Consensus 70 G~i~eAqe~aA~~fgAd~t--yFvvNGTS~ank~vi~a~~~~GD~--------VLvdRN~HKSi~~glilaGa~Pvyl~p 139 (557)
T COG1982 70 GPIKEAQELAARVFGADHT--YFVVNGTSTANKAVINAVLTPGDK--------VLVDRNCHKSIHHGLILAGATPVYLEP 139 (557)
T ss_pred ccHHHHHHHHHHHhCCCce--EEEECCccHHHHHHHHhhcCCCCE--------EEecCCccHHHHHHHHHcCCceEEecC
Confidence 3456677789999998764 688899999999999999999988 999999999999999999999999865
Q ss_pred C--C----CccccHHHHHHHhhc--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 255 T--S----SYTVDLAALQSAITG--NT-VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 255 ~--~----~~~~d~~~l~~~i~~--~~-~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
. + -+.++.+.+++++.+ .. +++++++|+. .|++-++++|.+.++++++|+.+|++++...-.+ +
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~------~ 212 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFS------P 212 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCccccccc------c
Confidence 4 2 246899999988754 34 7899999988 8999999999999999999999999987543211 0
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCC
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDL 361 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~ 361 (435)
..+-.-...+.|+.+.|+||.+.+-..+|.+.+++.
T Consensus 213 ~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~ 248 (557)
T COG1982 213 MLPESALNGGADFVTQSTHKLLAALSQASMIHVKDG 248 (557)
T ss_pred cCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCC
Confidence 111222235789999999999877788899888873
No 365
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.42 E-value=1.6e-11 Score=120.02 Aligned_cols=232 Identities=11% Similarity=-0.067 Sum_probs=154.7
Q ss_pred CcChhHHHHHHHHHHHHHHHhCCCCCCce-EEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEE-EeCCCchh--HHHHHH
Q psy10210 168 DIFPGVCKMEAEVIKMCARMFNGGPETCG-CMTSGGTESIMMACKAYRDYAREEKGISLPEIV-LPTTAHPA--FDKAAN 243 (435)
Q Consensus 168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~-~~t~ggteai~~a~~a~~~~~~~~~g~~~~~vi-v~~~~~~~--~~~~~~ 243 (435)
+.++.+.++..++.+.+.++++.+.+.++ ++++|||.++.+++..+..++++ ++ +....+.+ +.+.++
T Consensus 42 HRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~--------~~~~~~tG~fg~r~~~ea~ 113 (364)
T PRK12462 42 HRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAA--------APEYVTTGYWSRKAIGEAS 113 (364)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCc--------EEEEEeCCHHHHHHHHHHH
Confidence 45678889999999999999999765455 55566999999999999876664 44 44455555 556666
Q ss_pred HcCCEEEEEecC----CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcc
Q psy10210 244 YFGMKVKHIRLT----SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFM 319 (435)
Q Consensus 244 ~~g~~v~~vp~~----~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~ 319 (435)
.+| ++..+... .+..++++++ .++++...|.+++-.+.+|+.-+ ++.+.+++++++|.+.+-+.
T Consensus 114 ~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s---- 181 (364)
T PRK12462 114 RVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS---- 181 (364)
T ss_pred hcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhC----
Confidence 666 55544321 1233455554 23456788999999999999854 33334689999999865432
Q ss_pred cccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCC-C-CCCCccccCCCchHHHHHH
Q psy10210 320 SAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGG-N-YGSPSVSGSRSGGIIATCW 397 (435)
Q Consensus 320 ~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg-~-~~~~~~~gsr~~~~ia~~~ 397 (435)
.|+|+... |++..+.+|.+ ||.|+++++++++.+.+... ..|.+..- . ....+...+.+...+-++-
T Consensus 182 -------~pid~~~~--dvi~agsQKnl-gP~Gltvvivs~~al~~~~~-~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~ 250 (364)
T PRK12462 182 -------RPFDVEAY--GMVYAHAQKNL-GPAGVTVAIIRRALLERVPD-TLPPMLDFRTHVEHRSNYNTPPVFAIYVMA 250 (364)
T ss_pred -------CCCChHHc--cEEEeeccccC-CCCceEEEEECHHHHhhccc-cCCchhhHHHHHhcCCCCCCchHHHHHHHH
Confidence 36777654 99999999996 59999998888876543211 11221100 0 0011222355666666777
Q ss_pred HHHHHhcHH--HHHHHHHHHHHHHHHHHHhcCCcc
Q psy10210 398 AAMMYFGFE--AQVWICVRYHFNYKSCLQNLSDLW 430 (435)
Q Consensus 398 a~l~~~g~~--g~~~~~~~~~~~~~~~~~~l~~l~ 430 (435)
.+++.+.++ |+.+..+++.+.++.+.+.+.+..
T Consensus 251 ~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~ 285 (364)
T PRK12462 251 LVLRWIRDEIGGVHAMRDINARKAAMLYATLDALN 285 (364)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777777666 777777777777777776666555
No 366
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.40 E-value=1.7e-11 Score=131.25 Aligned_cols=257 Identities=12% Similarity=0.003 Sum_probs=155.7
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-Hhhhhc
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEK 221 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~ 221 (435)
+++|++.++++++..+..+.... ....+...++.+.++++.+.+.-..++++++|+||++.|++.++. .... +
T Consensus 382 h~~p~I~~Ai~~Qa~rl~hv~~~-----~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~-~ 455 (817)
T PLN02974 382 TLQPELARAVAYAAGRYGHVMFP-----ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVD-H 455 (817)
T ss_pred CCCHHHHHHHHHHHhhCCccccC-----ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHh-c
Confidence 35899999999999885443211 123455566777777754322124899999999999999999964 3222 3
Q ss_pred CC-------------CCCeEEEeCCCchhHHHHHHHc-CC---------E-----EEEEecCC--------------Ccc
Q psy10210 222 GI-------------SLPEIVLPTTAHPAFDKAANYF-GM---------K-----VKHIRLTS--------------SYT 259 (435)
Q Consensus 222 g~-------------~~~~viv~~~~~~~~~~~~~~~-g~---------~-----v~~vp~~~--------------~~~ 259 (435)
|. .+.+||.-..+|++-...+... +. . ..+++... .+.
T Consensus 456 G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~ 535 (817)
T PLN02974 456 GFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFS 535 (817)
T ss_pred CCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccc
Confidence 42 3667998888888833332222 21 0 01111000 000
Q ss_pred ----------------------------ccHHHHHHHhh--------cCceEEEEeCC-CCCcccc----cCHHHHHHHH
Q psy10210 260 ----------------------------VDLAALQSAIT--------GNTVMLVGSMP-NFPYGTM----DDIGAIAKLG 298 (435)
Q Consensus 260 ----------------------------~d~~~l~~~i~--------~~~~~v~~~~p-~nptG~~----~~i~~i~~la 298 (435)
...+.+++.+. +++.+++++.. +...|.+ +.++++.++|
T Consensus 536 ~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc 615 (817)
T PLN02974 536 SGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615 (817)
T ss_pred ccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHH
Confidence 00245666664 25677877774 5656766 5699999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecCCCCCCcc-CCcEEEEEeCCccccccccc---cC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFV---TS 372 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~---~~ 372 (435)
++||+++|.||++.||-. ....+.....|+ |+++++ |.+.+. .++|+++.+++ +.+....- ..
T Consensus 616 ~~~gilLI~DEV~TGfGR--------tG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~~~f~~~~~~~~ 684 (817)
T PLN02974 616 RSRKIPVIFDEVFTGLWR--------LGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEE-VFEAFRGPSKLDA 684 (817)
T ss_pred HHhCCEEEEeecccCCCc--------ccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHH-HHHhhccccccCC
Confidence 999999999999999833 223445544555 888887 775555 46788777654 33221000 01
Q ss_pred CCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH----HHHHHHHHHHHHHHHHH
Q psy10210 373 DWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE----AQVWICVRYHFNYKSCL 423 (435)
Q Consensus 373 ~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~----g~~~~~~~~~~~~~~~~ 423 (435)
-..|++|....+++ +++.++++.+.++ ++.++.+++.+.+.+.+
T Consensus 685 ~~hg~Ty~gnpl~c-------Aaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l 732 (817)
T PLN02974 685 LLHGHSYTAHPMGC-------AAAAKALQWYKDPSTNPNLIPPGSRLRELWDEEL 732 (817)
T ss_pred cccCCCCCcCHHHH-------HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 12444444444433 7888899998776 44455555555444444
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.40 E-value=1.3e-11 Score=124.95 Aligned_cols=258 Identities=12% Similarity=0.057 Sum_probs=152.4
Q ss_pred ChHhHH--HHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh--
Q psy10210 144 YQQDLV--DLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE-- 219 (435)
Q Consensus 144 g~~~l~--~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~-- 219 (435)
++|++. +++.+++.+.....+... ....+...++.+.++++.+.+.-+.++++++|+||++.|++.++....+
T Consensus 55 ~~p~v~~~~ai~~q~~~~~~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~ 131 (431)
T TIGR03251 55 NHPALVDDLAFRARLGAAAVNKPSNS---DVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHN 131 (431)
T ss_pred CChhhhHHHHHHHHHHHhhhcccccC---CCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcch
Confidence 489998 899888876422111111 0112333445556666653222247999999999999999999876421
Q ss_pred -hcCCC---CCeEEEeCCCchhHHHHHHHc-CCE-EE----------EEec-------CCCc--------cccHHHHHHH
Q psy10210 220 -EKGIS---LPEIVLPTTAHPAFDKAANYF-GMK-VK----------HIRL-------TSSY--------TVDLAALQSA 268 (435)
Q Consensus 220 -~~g~~---~~~viv~~~~~~~~~~~~~~~-g~~-v~----------~vp~-------~~~~--------~~d~~~l~~~ 268 (435)
.+|.+ +.+|+....+|++....+... |.. .. .++. +... .-+++++++.
T Consensus 132 ~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 211 (431)
T TIGR03251 132 QARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAA 211 (431)
T ss_pred hhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHH
Confidence 12432 467888888888855443322 211 00 0111 0000 0134555666
Q ss_pred hh---cCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCC--CccEE
Q psy10210 269 IT---GNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLP--GVTSI 339 (435)
Q Consensus 269 i~---~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~--gvd~~ 339 (435)
+. +++.+++++......|.+ +.+++|.++|++||+++|+||+++||-. .| ..+.+... ..|++
T Consensus 212 ~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Gr-----tG---~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 212 FAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGL-----TG---TAWAYQQLGVQPDIV 283 (431)
T ss_pred HHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCc-----cc---hHHHHHhcCCCCCEE
Confidence 63 578999999887777876 6899999999999999999999998733 12 12222222 35888
Q ss_pred EecCCCCCCccCCcEEEEEeCC--ccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHH
Q psy10210 340 SVDTHKYGFTPKGSSVVLYRDL--KYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHF 417 (435)
Q Consensus 340 ~~s~hK~~~~p~g~g~il~~~~--~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~ 417 (435)
+++ |.. | .+|+ +.+++ +.....+ ..+...++ |..| +....+++.++++.+..+++.+++++..+
T Consensus 284 ~~g--K~~--~-~~g~-~~~~~i~~~~~~~~-~~~~~~~~-----T~~g--npl~~aaa~a~L~~l~~~~l~~~~~~~g~ 349 (431)
T TIGR03251 284 AFG--KKT--Q-VCGI-MAGRRVDEVADNVF-AVPSRLNS-----TWGG--NLVDMVRATRILEIIEEERLVDNARVQGA 349 (431)
T ss_pred Eec--ccC--c-cceE-EecchHHHhhhhcc-cCccccCC-----CCCC--CHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 875 552 3 2344 44443 1111000 00111122 2222 23345678889999888888888888888
Q ss_pred HHHHHHHhc
Q psy10210 418 NYKSCLQNL 426 (435)
Q Consensus 418 ~~~~~~~~l 426 (435)
.+.+.++++
T Consensus 350 ~l~~~L~~l 358 (431)
T TIGR03251 350 HLLARLHEL 358 (431)
T ss_pred HHHHHHHHH
Confidence 887777654
No 368
>KOG2040|consensus
Probab=99.35 E-value=3.8e-11 Score=119.80 Aligned_cols=258 Identities=18% Similarity=0.172 Sum_probs=178.5
Q ss_pred HHhhcCCCCCCCC-cChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC-CCeEEEeCC
Q psy10210 156 FGLTSYTNPLHPD-IFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS-LPEIVLPTT 233 (435)
Q Consensus 156 ~~~~~~~~~~~~~-~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~-~~~viv~~~ 233 (435)
+..+.+.+|+.|. -.++..++..++.+++|++.|.+.- .+--++|.++-...+.++|.+... +|.. +...++|..
T Consensus 562 wp~fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~~--s~QPNsGA~GEYaGL~~IRaY~~~-kge~hRnvClIPvS 638 (1001)
T KOG2040|consen 562 WPEFANIHPFAPVEQAQGYQQLFTELEKDLCEITGFDSF--SLQPNSGAQGEYAGLRVIRAYLES-KGEGHRNVCLIPVS 638 (1001)
T ss_pred chhhccCCCCCchHHHhhHHHHHHHHHHHhheeecccce--eecCCCCcccchhhHHHHHHHHHh-ccCCcceeEEEeec
Confidence 4445555666663 3578999999999999999999743 233356677777777787777665 5654 455689999
Q ss_pred CchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEec
Q psy10210 234 AHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 234 ~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~ 309 (435)
+|......|.+.|++++.|.++.+|.+|..+|++...+ +-.++.+++|++ .|+. +.++++.++.++||--+..|.
T Consensus 639 AHGTNPASA~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 639 AHGTNPASAAMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred ccCCChhhHHhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecC
Confidence 99999999999999999999999999999999887653 568999999988 8988 679999999999999999998
Q ss_pred cccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCcc-----CCcEEEEEeCCccccc---cccccCCCCCCCCCC
Q psy10210 310 CLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTP-----KGSSVVLYRDLKYKHC---QYFVTSDWPGGNYGS 381 (435)
Q Consensus 310 ~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p-----~g~g~il~~~~~~~~~---~~~~~~~~~gg~~~~ 381 (435)
+---- ..| .....+.|.|+.-.+.||+++-| +|.|-|.+++. +... .-...+.-.++.-.-
T Consensus 718 ANMNA------qVG----lc~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H-LapfLP~HpVvs~~~~~~~~~~ 786 (1001)
T KOG2040|consen 718 ANMNA------QVG----LCRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH-LAPFLPSHPVVSPGRPEDTSPV 786 (1001)
T ss_pred CCccc------eec----ccCCccccccceeecccceeeecCCCCCCCCCccchhhh-ccccCCCCCccCCCCCCCCCCc
Confidence 73211 112 12233457899999999985433 45565555543 2211 001111111221111
Q ss_pred CccccCCCc--hHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 382 PSVSGSRSG--GIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 382 ~~~~gsr~~--~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
.++..+.-| ..+.-.|+.++.+|..|+.+..+-.+-++.+..++|+.
T Consensus 787 gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~ 835 (1001)
T KOG2040|consen 787 GSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLES 835 (1001)
T ss_pred cceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhh
Confidence 122222222 34457899999999999998877766666666655543
No 369
>KOG1360|consensus
Probab=99.35 E-value=5.3e-11 Score=112.90 Aligned_cols=254 Identities=13% Similarity=0.013 Sum_probs=172.0
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.++|++++++.+.++++..+-.... .-.+..+...++.+.+|++-+-+.. ++.++.--|++..+..+.+.
T Consensus 185 s~Hp~V~~A~~~tl~~hG~GAGGTR-NIsG~s~~hv~LE~eLA~LHqK~aA---LlFsSCfVANDstLftLak~------ 254 (570)
T KOG1360|consen 185 SRHPEVLDAMHDTLDRHGAGAGGTR-NISGHSKHHVRLEAELADLHQKEAA---LLFSSCFVANDSTLFTLAKK------ 254 (570)
T ss_pred cCChHHHHHHHHHHHHcCCCcCCcc-ccCCCCchhhhHHHHHHHHhcCcce---eeeeeeeeccchHHHHHHHH------
Confidence 3589999999999998755433222 2234445555666677777755432 44555566666666655322
Q ss_pred CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc----CceEEEEeCCCCCcccccCHHHHHHHH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG----NTVMLVGSMPNFPYGTMDDIGAIAKLG 298 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG~~~~i~~i~~la 298 (435)
.++.+|+..+..|.+.....+..++.-....- -|+++|++++.+ .+++|.+...++.+|.+.|+++|.+++
T Consensus 255 lpgcei~SD~gNHASMI~GIrns~v~K~IFrH-----ND~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDva 329 (570)
T KOG1360|consen 255 LPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH-----NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVA 329 (570)
T ss_pred CCCcEEeccccchHHHHHHhhhcCCcceeecc-----CCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHH
Confidence 23455777778999999999988875444442 378888888863 479999999999999999999999999
Q ss_pred HHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 299 EKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 299 ~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
++||..-.+||+++-+++ +..|.+...-|.....+|+|+....|. +|..| |. +.....+.+-.....+.
T Consensus 330 h~yGAiTFlDEVHAVGlY---G~rGaGvgerdGvm~kvDiIsGTLgKa-fGcVG-GY-IAat~~LvDmiRSyAaG----- 398 (570)
T KOG1360|consen 330 HKYGAITFLDEVHAVGLY---GPRGAGVGERDGVMHKVDIISGTLGKA-FGCVG-GY-IAATRKLVDMIRSYAAG----- 398 (570)
T ss_pred HHhCceeeeehhhhhccc---cCCCCCccccCCcchhhhhcccchhhh-ccccc-ce-ehhhhhHHHHHHHhcCc-----
Confidence 999999999999998877 344555555566666789999999998 56554 45 44444444322111221
Q ss_pred CCCCccccCCCchHHHHHHHHHHHhc-HHH--HHHHHHHHHHHHHHHHHh
Q psy10210 379 YGSPSVSGSRSGGIIATCWAAMMYFG-FEA--QVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 379 ~~~~~~~gsr~~~~ia~~~a~l~~~g-~~g--~~~~~~~~~~~~~~~~~~ 425 (435)
+-+..|-+...++++..+.+.+. .|| +++.-++...+.++++.+
T Consensus 399 ---FIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~ 445 (570)
T KOG1360|consen 399 ---FIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLME 445 (570)
T ss_pred ---eEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22344666667778888888774 333 333445555666666654
No 370
>KOG1359|consensus
Probab=99.34 E-value=2.2e-11 Score=111.26 Aligned_cols=246 Identities=10% Similarity=0.008 Sum_probs=163.5
Q ss_pred hHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCC
Q psy10210 145 QQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGIS 224 (435)
Q Consensus 145 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~ 224 (435)
+|++.++-+++++.+..+ +.....--+...+...+.+.+|++-+.. +.++..++-.|+..++.++..+.+.
T Consensus 83 hPeii~a~~~aleeyGaG-lssvrfIcGtq~iHk~LE~kiAqfh~rE---D~ilypscfdANag~feail~pedA----- 153 (417)
T KOG1359|consen 83 HPEIINAGQKALEEYGAG-LSSVRFICGTQDIHKLLESKIAQFHGRE---DTILYPSCFDANAGAFEAILTPEDA----- 153 (417)
T ss_pred ChHHHHHHHHHHHHhCCC-ccceeEEecchHHHHHHHHHHHHHhCCC---ceEEeccccccchHHHHHhcChhhh-----
Confidence 899999999999886443 2222333567788888888999987654 4577888899999999999988888
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
|+..+-.|.++....+... ....+|+-+++..+. -+-++|+....-+..|.+.|+++|.+++++
T Consensus 154 ---vfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei~~La~k 221 (417)
T KOG1359|consen 154 ---VFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEISQLAKK 221 (417)
T ss_pred ---hhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHHHHHHHh
Confidence 8888889999877766543 123456666665443 356777777778889999999999999999
Q ss_pred cCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCC
Q psy10210 301 YGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 301 ~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~ 380 (435)
||.++++|+|++.+++ +..|.+.....--...+|++.....|.++|..| |. ....+.+.+.......+|.-.
T Consensus 222 YgaLlfiDecHaTgf~---G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gy-ttgp~~li~llrqr~RpylFS--- 293 (417)
T KOG1359|consen 222 YGALLFIDECHATGFF---GETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GY-TTGPKPLISLLRQRSRPYLFS--- 293 (417)
T ss_pred cCcEEEEeecccceee---cCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CC-ccCChhHHHHHHhcCCceeec---
Confidence 9999999999998765 555665544443345689999999998654443 44 444444432211112222211
Q ss_pred CCccccCCCchHHHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210 381 SPSVSGSRSGGIIATCWAAM-MYFGFEAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l-~~~g~~g~~~~~~~~~~~~~~~~~ 424 (435)
.+-+.+.+..+..++ ..+......++.+.+.+.+++.++
T Consensus 294 -----nslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me 333 (417)
T KOG1359|consen 294 -----NSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFME 333 (417)
T ss_pred -----CCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 122222221122222 223445556666666666666654
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.28 E-value=1.4e-10 Score=117.53 Aligned_cols=265 Identities=11% Similarity=0.043 Sum_probs=151.6
Q ss_pred CCCCCCCCcccc---cccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHH
Q psy10210 128 GHYDWKHGRVSG---AVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTE 204 (435)
Q Consensus 128 ~~~~~~~~~~~~---~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggte 204 (435)
+++.|.+...+. ..-+++|++.+++.+++.+... +......+.++.+.+++++.. .+.+.++++|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--------~~~~~~~~~~la~~l~~~~p~--~~~v~f~~sGse 115 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN--------FTRPSAIELDAAESFLELIDG--ADMVKFCKNGSD 115 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcC--------CCCCCHHHHHHHHHHHHhCCc--cceEEEecCHHH
Confidence 444554443332 2333589999999999886321 111234455677788887742 247999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCeEEEe-CCCchhHHHHHH-----HcCCE--EE--EEecCCCccccHHHHHHHhh---c
Q psy10210 205 SIMMACKAYRDYAREEKGISLPEIVLP-TTAHPAFDKAAN-----YFGMK--VK--HIRLTSSYTVDLAALQSAIT---G 271 (435)
Q Consensus 205 ai~~a~~a~~~~~~~~~g~~~~~viv~-~~~~~~~~~~~~-----~~g~~--v~--~vp~~~~~~~d~~~l~~~i~---~ 271 (435)
|++.|++.++.... +++|+.. ...|+++..... ..|.. .. .+++. .-|++++++++. +
T Consensus 116 A~e~AlklAr~~tg------r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 116 ATSAAVRLARAYTG------RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR---YNDIASLEALFEDHPG 186 (431)
T ss_pred HHHHHHHHHHHHhC------CCeEEEeccCccccccccccccCCCCCCCChhHhccccccC---CCCHHHHHHHHHhCCC
Confidence 99999999887632 2346554 233332111100 00110 00 01111 127889998885 2
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCcc
Q psy10210 272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTP 350 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p 350 (435)
++.+|++.......+..+.+++|.++|++||+++|+||++.|+... +.+... ++. ..|+++++ |.+.+.
T Consensus 187 ~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-----~~g~~~~~gv---~PDi~t~g--K~lggG 256 (431)
T PRK06209 187 RIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-----MRGAQKLYGI---VPDLSCFG--KALGNG 256 (431)
T ss_pred CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-----cchhhHHhCC---Ccceeeeh--hhhcCC
Confidence 4667777655433333467999999999999999999999877331 110000 111 24776654 875554
Q ss_pred CCcEEEEEeCCccccccccccCCCCCCCC-CCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 351 KGSSVVLYRDLKYKHCQYFVTSDWPGGNY-GSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 351 ~g~g~il~~~~~~~~~~~~~~~~~~gg~~-~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
...|.++.++ ++.+......... .+.+ .+.+. +.+...++++.++++.+.++++.+++++..+++++.+++
T Consensus 257 ~p~~av~~~~-~i~~~~~~~~~~~-~~~~~~~~T~--~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~ 328 (431)
T PRK06209 257 FAVSALAGKR-EYMELGGLEHTDR-ERVFLLSTTH--GAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328 (431)
T ss_pred cccEEEEEHH-HHHhhhcccccCC-CCceeeccCC--CCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 5567766654 4433200000000 0000 00111 122245678889999998888888888888887776654
No 372
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.24 E-value=1.3e-10 Score=112.31 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=129.1
Q ss_pred CCCCCCceEEcCChHHHHHHHHHHHHHHhhh--hcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHH
Q psy10210 189 NGGPETCGCMTSGGTESIMMACKAYRDYARE--EKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266 (435)
Q Consensus 189 g~~~~~~~~~t~ggteai~~a~~a~~~~~~~--~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~ 266 (435)
++...+.++++++.+.|+.+++.++...... .+| -+++ +.++.+...++..|++++++.. .......+++
T Consensus 79 ~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g-----~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~~d~~ 150 (395)
T COG1921 79 GLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRG-----ELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHLKDYE 150 (395)
T ss_pred cccchhheeeECCcHHHHHHHHhhhccCCeEEEEcc-----cccc-CCCCChhHHHHHcCCEEEEecc--cCcCCHHHHH
Confidence 3333346899999999999999887652211 011 2344 6888999999999999988863 4557899999
Q ss_pred HHhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC
Q psy10210 267 SAITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH 344 (435)
Q Consensus 267 ~~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h 344 (435)
.+|+++|++++-.+-+|- |.. -+.++++++|+++|+++++|.+.+..+-. - ...-.+...|+|.+++|++
T Consensus 151 ~AIne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~-----e--~~l~~~la~GaDLV~~Sgd 222 (395)
T COG1921 151 LAINENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDK-----E--PDLREALALGADLVSFSGD 222 (395)
T ss_pred HHhccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCcccccc-----c--cchhHHHhcCCCEEEEecc
Confidence 999999998877766653 555 46788999999999999999997654321 0 0011233568999999999
Q ss_pred CCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210 345 KYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF 405 (435)
Q Consensus 345 K~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~ 405 (435)
|.+.||. +|+ +++++++..... ..+...+ + .-.-..+++..++++.+-.
T Consensus 223 KllgGPq-aGi-i~GkKelI~~lq-~~~l~Ra-------l--rv~K~tla~l~~aLe~y~~ 271 (395)
T COG1921 223 KLLGGPQ-AGI-IVGKKELIEKLQ-SHPLKRA-------L--RVDKETLAALEAALELYLQ 271 (395)
T ss_pred hhcCCCc-cce-EechHHHHHHHH-hhhhhhh-------h--hcCcHhHHHHHHHHHHHcC
Confidence 9987877 577 667777653311 1111111 0 0111245678888888765
No 373
>KOG0633|consensus
Probab=99.23 E-value=2.3e-11 Score=109.42 Aligned_cols=211 Identities=18% Similarity=0.114 Sum_probs=137.1
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc--
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-- 271 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-- 271 (435)
+++.+..|+-|.|.+.+++.+.+|.+ +|+.-.|+|.-|.-.|...+++++.+|.++++.+|.+++.+.+..
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~PGke-------KIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds 159 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDPGKE-------KILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDS 159 (375)
T ss_pred cceEEecCcHHHHHHHHhheecCCcc-------ceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccc
Confidence 48999999999999999999999854 499999999998888889999999999999999999999988763
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHc-CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE-ecCCC-CCC
Q psy10210 272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY-GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS-VDTHK-YGF 348 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~-~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~-~s~hK-~~~ 348 (435)
.++++++++|+||||.+-..+.|.++.+.- +..+++||+|-.|.-. . ........-...++ -..+| +|+
T Consensus 160 ~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~-------~-S~~~lV~kYpNLivlqTlSKsfGL 231 (375)
T KOG0633|consen 160 KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGV-------E-SRMKLVKKYPNLIVLQTLSKSFGL 231 (375)
T ss_pred cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccc-------c-ccchHhHhCCceeehhhhhhhcCc
Confidence 689999999999999995555555554432 7899999999776421 0 01111111112333 24556 455
Q ss_pred ccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH--H-hcHHHHHHHHHHHHHHHHHHHHh
Q psy10210 349 TPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM--Y-FGFEAQVWICVRYHFNYKSCLQN 425 (435)
Q Consensus 349 ~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~--~-~g~~g~~~~~~~~~~~~~~~~~~ 425 (435)
++..+|+.++. ..+.........+|.- +..+|+ ++.+++. . -..+.+.+.+-+-++++-..+.+
T Consensus 232 AGiRvG~~~~~-~~ia~iln~~KaPYNi------S~~~s~------~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~ 298 (375)
T KOG0633|consen 232 AGIRVGYGAFP-LSIAEILNRAKAPYNI------SVAGSV------AALAALSDSNGKKMEDVRDAIVRERERLFKELTE 298 (375)
T ss_pred ceeEeeccccc-HHHHHHHHhccCCccc------cchhHH------HHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 56666774443 3333221111222211 111211 2223332 1 12456666666666666667777
Q ss_pred cCCcccc
Q psy10210 426 LSDLWLY 432 (435)
Q Consensus 426 l~~l~~~ 432 (435)
++.+..|
T Consensus 299 v~~~~~~ 305 (375)
T KOG0633|consen 299 VPFLNDY 305 (375)
T ss_pred CccccCC
Confidence 7766543
No 374
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.19 E-value=5.4e-10 Score=110.11 Aligned_cols=241 Identities=15% Similarity=0.114 Sum_probs=137.2
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHH-HhhhhcCCCCCeEEEeCCCchh-HHHHHHHcCC
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRD-YAREEKGISLPEIVLPTTAHPA-FDKAANYFGM 247 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~-~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~g~ 247 (435)
.|.+.++|+ .++++||.+ .+++|..|+.+..++..++.. ++++ .|...+..+++...|.. ....+...|+
T Consensus 73 dpSv~~Lee----~vael~G~E---~alpthqGRgaE~Il~~~~~~~~g~e-~g~~~~~~~v~hn~~fett~g~a~l~G~ 144 (467)
T TIGR02617 73 SRSYYALAE----SVKNIFGYQ---YTIPTHQGRGAEQIYIPVLIKKREQE-KGLDRSKMVAFSNYFFDTTQGHSQINGC 144 (467)
T ss_pred CchHHHHHH----HHHHHhCCc---eEEECCCCchHHHHHHHhhccccccc-ccccccccccceEEEEecchHHHHHcCc
Confidence 345555554 566778775 468898889999999998876 4544 11111111223333333 3445777898
Q ss_pred EEEEEecC----------CCccccHHHHHHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEec
Q psy10210 248 KVKHIRLT----------SSYTVDLAALQSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 248 ~v~~vp~~----------~~~~~d~~~l~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~ 309 (435)
.++.++.+ .+|.+|+++++++|.+ +...+..+-.+|..| .+ ++++++.++|++||+++|.|+
T Consensus 145 ~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDg 224 (467)
T TIGR02617 145 TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDS 224 (467)
T ss_pred eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEh
Confidence 88776431 3588999999999984 333444443445444 34 889999999999999999999
Q ss_pred cccchhhhcccc--cCCCCCCC-CCC---CCCccEEEecCCCCCCccCCcEEEEEeCC---ccccccccccCCCCCCCCC
Q psy10210 310 CLGGFLAPFMSA--AGYPLPPF-DFS---LPGVTSISVDTHKYGFTPKGSSVVLYRDL---KYKHCQYFVTSDWPGGNYG 380 (435)
Q Consensus 310 ~~~~~~~~~~~~--~g~~~~~~-d~~---~~gvd~~~~s~hK~~~~p~g~g~il~~~~---~~~~~~~~~~~~~~gg~~~ 380 (435)
|--.=-..|.+. .++...+. +.. ...+|++++|..|-+++|.| |+++.+++ ++.+........+.|-
T Consensus 225 ARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~EGf--- 300 (467)
T TIGR02617 225 ARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQEGF--- 300 (467)
T ss_pred HHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhcccccCC---
Confidence 752110111110 11111111 110 14579999999999889988 67677777 4444422223333332
Q ss_pred CCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q psy10210 381 SPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQ 424 (435)
Q Consensus 381 ~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~ 424 (435)
...|.-++..+.+....|...-.+.|.+.--...+++.+.++
T Consensus 301 --~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~ 342 (467)
T TIGR02617 301 --PTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLE 342 (467)
T ss_pred --cCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHH
Confidence 112234444443333344444444444333333344444443
No 375
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.17 E-value=2.7e-10 Score=108.04 Aligned_cols=148 Identities=20% Similarity=0.228 Sum_probs=98.6
Q ss_pred CChHHHHHHHHHHHHHHhhhhcCCCCCeEE-EeCCCchhHHHHH----------HHcCCEEEEEecCCCccccHHHHHHH
Q psy10210 200 SGGTESIMMACKAYRDYAREEKGISLPEIV-LPTTAHPAFDKAA----------NYFGMKVKHIRLTSSYTVDLAALQSA 268 (435)
Q Consensus 200 ~ggteai~~a~~a~~~~~~~~~g~~~~~vi-v~~~~~~~~~~~~----------~~~g~~v~~vp~~~~~~~d~~~l~~~ 268 (435)
.+||.|+.+++.++..++|+ ++ +.-.-|....+.. +-+|++...||+.+++.+|.+.++++
T Consensus 79 vSGTHAi~~~Lfg~LrpGD~--------ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~ 150 (403)
T PF06838_consen 79 VSGTHAIALALFGVLRPGDE--------LLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTEDGTIDWEAIKKA 150 (403)
T ss_dssp -SHHHHHHHHHHHH--TT-E--------EEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TTSSB-HHHHHHH
T ss_pred cchHHHHHHHHHhcCCCCCe--------EEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCCCCcCHHHHHHh
Confidence 37899999999999999997 54 3444466666555 34578999999999999999999999
Q ss_pred hhcCceEEEEeCC----CCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEec
Q psy10210 269 ITGNTVMLVGSMP----NFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVD 342 (435)
Q Consensus 269 i~~~~~~v~~~~p----~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s 342 (435)
++++|++|++.-- .-|+=.+++|+++.+++|+. ++.+.||.|||.|+- ......-|+|++..|
T Consensus 151 ~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE-----------~~EP~~vGADl~aGS 219 (403)
T PF06838_consen 151 LKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE-----------TQEPTEVGADLMAGS 219 (403)
T ss_dssp HHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS-----------SS-GGGGT-SEEEEE
T ss_pred hccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc-----------ccCccccchhheecc
Confidence 9999999999832 22333447888888888876 789999999999875 223344589999999
Q ss_pred CCCCCCcc-CCcEEEEEeCCccccc
Q psy10210 343 THKYGFTP-KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 343 ~hK~~~~p-~g~g~il~~~~~~~~~ 366 (435)
.-|..+|. ..+|.-++.++++.+.
T Consensus 220 LIKNpGGgiAptGGYIaGr~~lVe~ 244 (403)
T PF06838_consen 220 LIKNPGGGIAPTGGYIAGRKDLVER 244 (403)
T ss_dssp TTSGGGTTT-SS-EEEEESHHHHHH
T ss_pred ceeCCCCCccCcCCEEechHHHHHH
Confidence 99984333 3344547777777654
No 376
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.14 E-value=6.1e-10 Score=107.66 Aligned_cols=231 Identities=17% Similarity=0.190 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCceEEcCChH-HHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210 174 CKMEAEVIKMCARMFNGGPETCGCMTSGGT-ESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHI 252 (435)
Q Consensus 174 ~~~e~~~~~~la~l~g~~~~~~~~~t~ggt-eai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v 252 (435)
.++-..+..-+-+..|.......++++.+| .++.+++.+++.+.. ...|+.+.-.|.+-.+++...|++++.|
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~------a~~Viw~ridqkSc~kai~~AGl~~~vV 128 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPK------AKYVIWPRIDQKSCFKAIERAGLEPVVV 128 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--------EEEEEEEETHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhcccC------CceEEEeeccccchHHHHHhcCCeEEEe
Confidence 344445555556667776444455665554 677777777762211 3469999999999999999999999999
Q ss_pred ecC---CCccccHHHHHHHhhc---CceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 253 RLT---SSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 253 p~~---~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
|.. +.-..|++++++.+.+ +..+.++++.+...|.. |++++|+++|++||++.++..||+-=...++...
T Consensus 129 ~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i--- 205 (389)
T PF05889_consen 129 ENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLI--- 205 (389)
T ss_dssp -EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHH---
T ss_pred eccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHH---
Confidence 853 3335678888888763 56788888777777777 6699999999999999999999974111000000
Q ss_pred CCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcH
Q psy10210 326 LPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGF 405 (435)
Q Consensus 326 ~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~ 405 (435)
.-..+...+|.+.-|+-|.+..|.|-+++...++..... ....|+|= -+.....-..-++..+|.
T Consensus 206 --~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~---vs~~YpGR----------as~sp~ld~~itLl~LG~ 270 (389)
T PF05889_consen 206 --QQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILA---VSKEYPGR----------ASASPSLDLFITLLSLGC 270 (389)
T ss_dssp --HHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHH---HHHTSHSH----------BTSHHHHHHHHHHHHHHH
T ss_pred --HHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHH---HHHHhhhh----------hhcccchHHHHHHHHHhh
Confidence 001111236888899999888999977766666655544 23344331 111223456778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 406 EAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 406 ~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
.+|...+.+..+.+..+.+++..
T Consensus 271 ~g~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 271 TGYGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777666665543
No 377
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.14 E-value=1.3e-09 Score=103.89 Aligned_cols=219 Identities=16% Similarity=0.188 Sum_probs=138.7
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec-C-CCccccHHHHHHHhhc--
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL-T-SSYTVDLAALQSAITG-- 271 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~-~-~~~~~d~~~l~~~i~~-- 271 (435)
.+=|.|||.|+.++..-+...... ..|.+++|+|+.+....+..|.++...|. | ++..+|.+.|...+++
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~------~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~ 170 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPD------ATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAP 170 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCC------ceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCC
Confidence 466789999999999988655443 34999999999999999999999999997 3 4556999998887763
Q ss_pred -CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc-cEEEecCCCC
Q psy10210 272 -NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV-TSISVDTHKY 346 (435)
Q Consensus 272 -~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv-d~~~~s~hK~ 346 (435)
+...+.-..+|||||.- +.+++|.++.++.+...++|-+|-||.-...++ .++... +...+. -+++.|+.|.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeD-a~~lR~--~a~~~~~~lva~S~SKn 247 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEED-AYALRL--FAEVGPELLVASSFSKN 247 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHH-HHHHHH--HHHhCCcEEEEehhhhh
Confidence 55566666889999987 789999999999999999999999886421111 000000 111122 4667789998
Q ss_pred CCccCC--cEEE--EEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHH---HhcHHHHHHHHHHHHHHH
Q psy10210 347 GFTPKG--SSVV--LYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMM---YFGFEAQVWICVRYHFNY 419 (435)
Q Consensus 347 ~~~p~g--~g~i--l~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~---~~g~~g~~~~~~~~~~~~ 419 (435)
++-+| +|.+ +..+++.............-+.|.+|+-.|.+-.+.+.. -..|+ .-..+++++++.+++..+
T Consensus 248 -fgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~-~p~Lra~W~~El~~Mr~Ri~~mR~~l 325 (396)
T COG1448 248 -FGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILN-NPELRAEWEQELEEMRQRILEMRQAL 325 (396)
T ss_pred -hhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45433 3443 334443332211111111122333344333221111100 00111 124567888888888887
Q ss_pred HHHHHh
Q psy10210 420 KSCLQN 425 (435)
Q Consensus 420 ~~~~~~ 425 (435)
.+.+++
T Consensus 326 v~~L~~ 331 (396)
T COG1448 326 VDALKA 331 (396)
T ss_pred HHHHHh
Confidence 777765
No 378
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.01 E-value=2.2e-10 Score=109.84 Aligned_cols=170 Identities=16% Similarity=0.225 Sum_probs=42.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh------HHHHHHHcCCEEEEE
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA------FDKAANYFGMKVKHI 252 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~------~~~~~~~~g~~v~~v 252 (435)
.+.+.++.++|+.. .+++++...|+++++.++.. +.+ ||++.-.-.. +....+..|+++++|
T Consensus 51 ~v~~ll~~ltgAea---A~VvNnnaAAv~L~l~~la~-~~E--------vIvsRGelVeiGgsFRip~vm~~sGa~lvEV 118 (367)
T PF03841_consen 51 HVEELLCELTGAEA---ALVVNNNAAAVLLALNTLAK-GKE--------VIVSRGELVEIGGSFRIPDVMRQSGARLVEV 118 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---cccccccccccccccccccc-ccc--------ccccccccccccccccccccccccccccccc
Confidence 34556788888753 48888889999999988753 333 7777653222 456677789999888
Q ss_pred ecCCCccccHHHHHHHhhcCceEEEEeCCCCCc--ccc--cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC--
Q psy10210 253 RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPY--GTM--DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL-- 326 (435)
Q Consensus 253 p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~npt--G~~--~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~-- 326 (435)
-.. .+..+++++++|+++|.+++-.+++|.. |.. -+++++++++++|++++++|...|.+.-. ...|.+.
T Consensus 119 Gtt--N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl--~~~gl~~Ep 194 (367)
T PF03841_consen 119 GTT--NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDL--SPYGLPDEP 194 (367)
T ss_dssp --------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHH--HTT------
T ss_pred ccc--cccccccccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCc--ccccCcccc
Confidence 753 3457899999999999999988877753 434 47999999999999999999987655421 1112221
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
...+....|+|.+++|+.|.++||. +|+ ++.++++.+.
T Consensus 195 ~v~~~~~~GaDlV~fSGdKlLGGPQ-aGi-I~Gkk~lI~~ 232 (367)
T PF03841_consen 195 TVQEYLAAGADLVTFSGDKLLGGPQ-AGI-IVGKKELIEK 232 (367)
T ss_dssp ----CCCCT-SEEEEETTSSSSS-S--EE-EEEEHHHHHH
T ss_pred HHHHHhhcCCCEEEEECCCcCCCCC-eEE-EEeCHHHHHH
Confidence 1335567899999999999987776 687 5566666543
No 379
>KOG1357|consensus
Probab=98.98 E-value=1e-08 Score=99.22 Aligned_cols=250 Identities=14% Similarity=0.081 Sum_probs=156.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeE
Q psy10210 149 VDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEI 228 (435)
Q Consensus 149 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~v 228 (435)
.+...+.+.++... .-.+...-+..+...++.+.+|+++|.+.. +++..| -..+.+.+-++..++.. |
T Consensus 157 a~~~~~~~~kygl~-~css~~e~G~~~~hkelE~l~A~f~g~e~a--~vF~mG-f~TNs~~~p~l~~~gsL--------I 224 (519)
T KOG1357|consen 157 AEASLKSFDKYGLS-RCSSRHEAGTTEEHKELEELVARFLGVEDA--IVFSMG-FATNSMNIPSLLGKGSL--------I 224 (519)
T ss_pred ChHHHHHHHHhccc-ccccchhcccHHHHHHHHHHHHHhcCCcce--EEEecc-ccccccCcceeecCCcc--------e
Confidence 34444455544322 222333456788889999999999998653 455444 55555666666666654 8
Q ss_pred EEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhc-------C------ceEEEEeCCCCCcccccCHHHHH
Q psy10210 229 VLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITG-------N------TVMLVGSMPNFPYGTMDDIGAIA 295 (435)
Q Consensus 229 iv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~-------~------~~~v~~~~p~nptG~~~~i~~i~ 295 (435)
+..+-+|.++...|+..|+.++....+ |+++||+.+.+ + ..+|++......-|.+.++.++.
T Consensus 225 iSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vv 299 (519)
T KOG1357|consen 225 ISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVV 299 (519)
T ss_pred eeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHH
Confidence 888889999999999999999888754 45566665542 2 24556666666889999999999
Q ss_pred HHHHHcCCcEEEeccccchhhhcccccCCCCCCC-CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCC
Q psy10210 296 KLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPF-DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDW 374 (435)
Q Consensus 296 ~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~-d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~ 374 (435)
+++++|..+++.||+++.++. ...|.+.-.+ ......+|++-..+.|.+ +..| |. +..++++.+... .+-
T Consensus 300 alkkkykayl~lDEAHSiGA~---g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~G-Gy-iagsk~lid~lr---t~s 370 (519)
T KOG1357|consen 300 ALKKKYKAYLYLDEAHSIGAM---GATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAG-GY-IAGSKELIDYLR---TPS 370 (519)
T ss_pred HhhccccEEEEeecccccccc---CCCCcceeeccCCCchhheeecceehhhc-cccc-ce-ecCcHHHHhhhc---cCC
Confidence 999999999999999998876 2334433222 222234688888899984 4332 34 556666554321 111
Q ss_pred CCCCCCCCccccCCCchHHHHHHHHHHHh----cHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy10210 375 PGGNYGSPSVSGSRSGGIIATCWAAMMYF----GFEAQVWICVRYHFNYKSCLQNLSDL 429 (435)
Q Consensus 375 ~gg~~~~~~~~gsr~~~~ia~~~a~l~~~----g~~g~~~~~~~~~~~~~~~~~~l~~l 429 (435)
....|++ .-|.+.+ .....+++.+ |.+.-+++++++.++...+...+++.
T Consensus 371 ~~~~yat---~~sppva--qq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 371 PSALYAT---SLSPPVA--QQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred Cceeecc---cCChHHH--HHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 1111211 1122211 1223334433 45666777888877777777666543
No 380
>KOG2467|consensus
Probab=98.95 E-value=1.2e-07 Score=89.60 Aligned_cols=270 Identities=18% Similarity=0.201 Sum_probs=163.6
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCCCcccccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCC
Q psy10210 112 RNRLEILELVSNYLARGHYDWKHGRVSGAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGG 191 (435)
Q Consensus 112 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~ 191 (435)
.....+++.+-..+.. .|.+|.-+- -|.|..+. +-++|.-+++...+.||++
T Consensus 51 Fts~aVmeAlGS~ltN---KYSEGyPG~-RYYGGne~------------------------ID~iE~LCq~RALeaF~ld 102 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTN---KYSEGYPGA-RYYGGNEY------------------------IDQIELLCQKRALEAFGLD 102 (477)
T ss_pred chHHHHHHHHhHHhhc---ccccCCCcc-cccCcchH------------------------HHHHHHHHHHHHHHHhCCC
Confidence 5667778877766553 454444332 22222222 3345555566667788888
Q ss_pred CCCceEEc--CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH--HHHcCCE---EE--EEecC-CCcccc
Q psy10210 192 PETCGCMT--SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA--ANYFGMK---VK--HIRLT-SSYTVD 261 (435)
Q Consensus 192 ~~~~~~~t--~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~--~~~~g~~---v~--~vp~~-~~~~~d 261 (435)
++.+++-+ -+|+-|++.+..++..++++--| .=.|+-.|-+.--. .+...+. .. ...+| .+|-+|
T Consensus 103 p~kWGVNVQp~SGSPANfavYtall~Ph~RiMG-----LDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~ID 177 (477)
T KOG2467|consen 103 PEKWGVNVQPYSGSPANFAVYTALLKPHERIMG-----LDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYID 177 (477)
T ss_pred HHHCceeeccCCCCchhhHHHhhhcCCCCeeee-----ccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCcee
Confidence 87665443 46789999999999999887222 12344444432111 1111111 11 12244 678899
Q ss_pred HHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEE
Q psy10210 262 LAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSIS 340 (435)
Q Consensus 262 ~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~ 340 (435)
-|.|++.-. =++++|+.-.-. .-..-|..++.++|.+.|.++.+|-++-.++.. +|.-..||+. +|+++
T Consensus 178 YD~Le~~A~~frPk~iiaG~Sa--Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVA----A~vipsPFey----~DiVT 247 (477)
T KOG2467|consen 178 YDKLEKTATLFRPKLIIAGTSA--YSRLIDYARFRKIADKVGAYLMADMAHISGLVA----AGVIPSPFEY----CDIVT 247 (477)
T ss_pred hHHHHHHHHhcCCcEEEecccc--chhhccHHHHHHHHHhcCceeehhhhhHHHHHh----cccCCCcccc----cceee
Confidence 999987543 477777643322 233468899999999999999999998766552 2443346654 89999
Q ss_pred ecCCCCCCccCCcEEEEEeCC--ccccc-----cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHH
Q psy10210 341 VDTHKYGFTPKGSSVVLYRDL--KYKHC-----QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICV 413 (435)
Q Consensus 341 ~s~hK~~~~p~g~g~il~~~~--~~~~~-----~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~ 413 (435)
..+||.+-||.| |+|.+|+- ..... .|.+..-... ..-|.++|..-...|++...+|+.-....|.+..+
T Consensus 248 TTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE~kINf--aVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~ 324 (477)
T KOG2467|consen 248 TTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLEDKINF--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQK 324 (477)
T ss_pred ccccccccCCcc-eeEEEeccCCcCCCCCCCcceechhhhhhh--hccccccCCCCcchHHHHHHHHHhhCCHHHHHHHH
Confidence 999999989986 77788872 11100 0100000000 01134455555556666777788877788888888
Q ss_pred HHHHHHHHHHHhcC
Q psy10210 414 RYHFNYKSCLQNLS 427 (435)
Q Consensus 414 ~~~~~~~~~~~~l~ 427 (435)
++..+++.+.+.|.
T Consensus 325 qV~~Nakala~~l~ 338 (477)
T KOG2467|consen 325 QVLKNAKALASALI 338 (477)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777777766553
No 381
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.95 E-value=4.7e-08 Score=93.62 Aligned_cols=224 Identities=10% Similarity=0.045 Sum_probs=116.3
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHH-HHHhhh--h---cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEE
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAY-RDYARE--E---KGISLPEIVLPTTAHPAFDKAANYFGMKVKHI 252 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~-~~~~~~--~---~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~v 252 (435)
|+++.+++++|.+++ ++++..+++-.++.-+.+. .-.|-. . ....+.+.++|.|.|.-+...++.+|++.+.|
T Consensus 73 e~r~l~a~llgv~~~-~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~V 151 (425)
T PF12897_consen 73 EARELFAELLGVPPE-NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIPV 151 (425)
T ss_dssp HHHHHHHHHHTS-GG-GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEEE
T ss_pred HHHHHHHHHhCCCHH-HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEec
Confidence 344455566666665 7777666554443322221 111111 0 01235679999999999999999999999999
Q ss_pred ecCCCccccHHHHHHHhhc--CceEEEEe-CCCCCcccccC---HHHHHHH-HHHcCCcEEEeccccchhhhcccccCCC
Q psy10210 253 RLTSSYTVDLAALQSAITG--NTVMLVGS-MPNFPYGTMDD---IGAIAKL-GEKYGIPVHVDCCLGGFLAPFMSAAGYP 325 (435)
Q Consensus 253 p~~~~~~~d~~~l~~~i~~--~~~~v~~~-~p~nptG~~~~---i~~i~~l-a~~~~~~livD~~~~~~~~~~~~~~g~~ 325 (435)
|++++| +|++.+++++.+ .++.++.. -.+||||.+-. +++++.+ ....+..++.|.+|+---+. .....
T Consensus 152 pM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~--~~~~~- 227 (425)
T PF12897_consen 152 PMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLY--DEEPR- 227 (425)
T ss_dssp EEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSS--SSSS--
T ss_pred CCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeecc--ccccc-
Confidence 999888 899999999854 45655544 67899999944 4555554 23579999999999754331 00000
Q ss_pred CCCCCC-------CCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHH
Q psy10210 326 LPPFDF-------SLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWA 398 (435)
Q Consensus 326 ~~~~d~-------~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a 398 (435)
..+.+. ..++.-....|++|.-++..|++++..+...+..........-.| ..- .-+..
T Consensus 228 ~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIg-------------pdK-vNQLR 293 (425)
T PF12897_consen 228 DALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIG-------------PDK-VNQLR 293 (425)
T ss_dssp -----HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S----------------H-HHHHH
T ss_pred hhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeC-------------ccH-HHHHH
Confidence 000111 122335667789998788889998666665443221111110011 011 13334
Q ss_pred HHHHhc-HH-HHHHHHHHHHHHHHH
Q psy10210 399 AMMYFG-FE-AQVWICVRYHFNYKS 421 (435)
Q Consensus 399 ~l~~~g-~~-g~~~~~~~~~~~~~~ 421 (435)
-.+.++ .+ |+.++++++.+.++-
T Consensus 294 Hvrff~d~~gGv~aHM~kHa~il~P 318 (425)
T PF12897_consen 294 HVRFFKDAEGGVRAHMRKHAAILRP 318 (425)
T ss_dssp HHHHHHSHHTHHHHHHHHHHHHHHH
T ss_pred HHHHhcChhhHHHHHHHHHHHHHhh
Confidence 445554 46 888888888776543
No 382
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.83 E-value=3e-08 Score=91.25 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=110.0
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHH----------HHHcCCEEEEEecCCCccccHHHHHHHhh
Q psy10210 201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKA----------ANYFGMKVKHIRLTSSYTVDLAALQSAIT 270 (435)
Q Consensus 201 ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~----------~~~~g~~v~~vp~~~~~~~d~~~l~~~i~ 270 (435)
+||.||..++..++.++|+ -+.+.-.-|...... .+-+|++.+-+|+..+|.+|.+.++.+++
T Consensus 91 sGTHAI~~aLfg~LRpgDe-------ll~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~ 163 (416)
T COG4100 91 SGTHAIACALFGILRPGDE-------LLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADGKIDIQAVKTAIS 163 (416)
T ss_pred cchhHHHHHHHhccCCCCe-------EEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccccCCcccHHHHHHhcC
Confidence 5699999999999999987 233333445554443 34457788899998899999999999999
Q ss_pred cCceEEEEeC----CCCCcccccCHHHHHHHHHHc--CCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCC
Q psy10210 271 GNTVMLVGSM----PNFPYGTMDDIGAIAKLGEKY--GIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTH 344 (435)
Q Consensus 271 ~~~~~v~~~~----p~nptG~~~~i~~i~~la~~~--~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~h 344 (435)
++|++|.+.- ..-|+=.+++++++.++.++- ++.+.||.|||.|+- ......-|+|.+..|.-
T Consensus 164 ~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE-----------~~EPt~vGaDliAGSLI 232 (416)
T COG4100 164 DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE-----------EKEPTHVGADLIAGSLI 232 (416)
T ss_pred ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh-----------ccCccccchhhhcccee
Confidence 9999999873 334555668899999999986 688999999999875 23344558999999999
Q ss_pred CCCCcc-CCcEEEEEeCCccccc
Q psy10210 345 KYGFTP-KGSSVVLYRDLKYKHC 366 (435)
Q Consensus 345 K~~~~p-~g~g~il~~~~~~~~~ 366 (435)
|.-+|. .-+|.-+..++++.+.
T Consensus 233 KNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 233 KNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred eCCCCceeeccceeechHHHHHh
Confidence 984333 2234436666666544
No 383
>KOG2040|consensus
Probab=98.79 E-value=4.2e-07 Score=91.57 Aligned_cols=251 Identities=15% Similarity=0.161 Sum_probs=155.1
Q ss_pred hhchhhHHHHHHHHHHHH----HHHHh-hhhhcCCCCccccCCCCCCCCHHHHHHHHHHHHhCCCCCCCCC-cccccccC
Q psy10210 70 RKIPAVRKKLEEETGKVA----KLFQD-DIKQNNAGLEYFLELPSQGRNRLEILELVSNYLARGHYDWKHG-RVSGAVYY 143 (435)
Q Consensus 70 ~~lp~~~~~i~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~P~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~ 143 (435)
|++-..+....++++.+. +++.+ .+.++. ...-...+|+ +..+.++++.+.+...++. .|.+- ..+|+...
T Consensus 55 RHigp~~~dq~~ml~tlG~~dl~~l~~~~VP~~I-r~~~~l~~~~-~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn~~ 131 (1001)
T KOG2040|consen 55 RHIGPSPTDQQQMLDTLGYKDLDELIEKTVPKSI-RLKRPLKMDK-PLCESEMLQHLEDIASKNK-IWKSFIGMGYYNTH 131 (1001)
T ss_pred ccCCCCchHHHHHHHhcChhhHHHHHHhhcchhh-cccchhcCCC-CcCHHHHHHHHHHHHhhhh-HHHHhhcccccccc
Confidence 444444555666665443 23332 222221 1222334544 4899999999999877654 44321 22222222
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
-++.+.+-+-+--..+....|++++.+++..+-......+++++.|.+-. +..+-.-||.|-...+.+.+...
T Consensus 132 vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~a-NASLLDEgTAaaEAm~l~~~~~k------ 204 (1001)
T KOG2040|consen 132 VPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMA-NASLLDEGTAAAEAMALCNRINK------ 204 (1001)
T ss_pred CcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCccc-chhhhccchhHHHHHHHHHhhcc------
Confidence 23433333333222222235999999999999999999999999999865 56666667777666665554322
Q ss_pred CCCeEEEeCCCchhHHHHHHH----cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 224 SLPEIVLPTTAHPAFDKAANY----FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~~~~----~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
+.++++...+|+-....++. +|++++..+ +++.. ...++...+++..|.+ .|.+.+..++++.++
T Consensus 205 -rkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~~-~s~~~v~gvlvQYP~t-~G~i~d~~el~~~a~ 273 (1001)
T KOG2040|consen 205 -RKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEAD-YSSKDVSGVLVQYPDT-EGSVLDFDELVELAH 273 (1001)
T ss_pred -cceEEecCCCCcchhhhhhccccccceeEEecC--------HHHhh-ccccceeEEEEEcCCC-CCcccCHHHHHHHhh
Confidence 23499999999987766554 344433322 22211 1234678899999987 799999999999999
Q ss_pred HcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCc
Q psy10210 300 KYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGS 353 (435)
Q Consensus 300 ~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~ 353 (435)
+.+..+++-.-.-.+.+ ++ +| .+.|+|+...|+..+| .|.|-
T Consensus 274 ~~~s~vv~atDLLaLti--Lr------pP---gefGaDIavGSsQRFG-VPlGY 315 (1001)
T KOG2040|consen 274 ANGSLVVMATDLLALTI--LR------PP---GEFGADIAVGSSQRFG-VPLGY 315 (1001)
T ss_pred ccCceEEEeehhhHHHc--cC------Ch---hhcCceeeeccccccC-ccccC
Confidence 99988776544322222 11 12 2458999999999984 66553
No 384
>KOG1358|consensus
Probab=98.74 E-value=3.3e-07 Score=87.49 Aligned_cols=203 Identities=13% Similarity=0.108 Sum_probs=144.6
Q ss_pred ccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhh
Q psy10210 141 VYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREE 220 (435)
Q Consensus 141 ~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~ 220 (435)
...+++++.+.....++++.-+ ...|..|=+..+...++.+.+|+++|.+.. ++.+-|-.++..++-++..+||-
T Consensus 106 ~l~~~~~ike~a~~~lrkyGvG-sCGPrGFYGt~DvHldlE~~iakF~G~E~a---ivYs~gF~ti~S~ipafsKrGDI- 180 (467)
T KOG1358|consen 106 GLIENEEIKEEASFTLRKYGVG-SCGPRGFYGTIDVHLDLEKRIAKFMGTEDA---IVYSYGFSTIESAIPAFSKRGDI- 180 (467)
T ss_pred hhcccHHHHHHHHHHHHHhCCC-CcCCCcccccceeecccHHHHHHhhCCcce---eeeccccchhhhcchhhhccCcE-
Confidence 4446889999998888887444 344555556666667777889999998654 77777788899999999988886
Q ss_pred cCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC-------------ceEEEEeCCCCCccc
Q psy10210 221 KGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN-------------TVMLVGSMPNFPYGT 287 (435)
Q Consensus 221 ~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~-------------~~~v~~~~p~nptG~ 287 (435)
+.+..-.+.+..+..+...-.+.+... .|++++++.+.++ .+.|++..---++|.
T Consensus 181 -------i~~de~~nfaIq~GlqlSRS~i~~Fkh-----ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~ 248 (467)
T KOG1358|consen 181 -------IFVDEAVNFAIQKGLQLSRSTISYFKH-----NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGD 248 (467)
T ss_pred -------EEEehhhhHHHHHHHhhhhheeEEecC-----CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCc
Confidence 888888899999999888888877764 3667776665432 256777777777999
Q ss_pred ccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCC-CCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc
Q psy10210 288 MDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPP-FDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC 366 (435)
Q Consensus 288 ~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~-~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~ 366 (435)
+.++.+|.++..||...++.|+.++-+++ ++.|.+... +......+|.++.+..-. .+. .|..++++.-+..+
T Consensus 249 i~pl~~iv~lk~Kyk~RvildEs~SfG~l---g~~GrGvteH~~v~~~~iDiv~~sm~~a-las--~GgFc~G~~~i~~h 322 (467)
T KOG1358|consen 249 ICPLPEIVKLKNKYKFRVILDESLSFGVL---GKTGRGVTEHFGVPITDIDIVTASMETA-LAS--GGGFCAGKSFIADH 322 (467)
T ss_pred ccccHHHHHHHhhheEEEEEecccccccc---cccCccccccCCCCccceeeeeeccccc-ccc--cCceeecceeeEee
Confidence 99999999999999999999999987766 444444322 122223468888775443 232 23335555444433
No 385
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.68 E-value=9.1e-07 Score=83.68 Aligned_cols=165 Identities=17% Similarity=0.204 Sum_probs=106.8
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhH-HHHHHHcCCEEEEEecCC----------CccccHH
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAF-DKAANYFGMKVKHIRLTS----------SYTVDLA 263 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~~~----------~~~~d~~ 263 (435)
-++.|.-|..|-.+..-.+++.++..+| .++++++..|.-. ..-.+..|..++.+++++ .|.+|++
T Consensus 96 ~~iPthQGRgAE~Il~~i~ik~~~~~pg---~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~ 172 (471)
T COG3033 96 YTIPTHQGRGAENILIPILIKKGEQEPG---SKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLE 172 (471)
T ss_pred eeeeccCCccHHHHHHHHHhhhccccCC---ccccccccceecchhHHHHhcCCccccccccccccccccCCCCCccCHH
Confidence 3455655555555555555555554333 4466666666654 444666788888887752 3568999
Q ss_pred HHHHHhhc----CceEEEEeCCCCCcc-cc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCC---
Q psy10210 264 ALQSAITG----NTVMLVGSMPNFPYG-TM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFS--- 332 (435)
Q Consensus 264 ~l~~~i~~----~~~~v~~~~p~nptG-~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~--- 332 (435)
.|++.|++ |...|+++-.+|.-| .. ++++++.++|++|+++++.|+|-..=-.-|.+....+-..+...
T Consensus 173 kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~Ia 252 (471)
T COG3033 173 KLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIA 252 (471)
T ss_pred HHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHH
Confidence 99999975 566777665555554 33 89999999999999999999985321111222211110111110
Q ss_pred ---CCCccEEEecCCCCCCccCCcEEEEEeCCcc
Q psy10210 333 ---LPGVTSISVDTHKYGFTPKGSSVVLYRDLKY 363 (435)
Q Consensus 333 ---~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~ 363 (435)
..-+|-+++|..|=++.+.| |+++++|+.+
T Consensus 253 rEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~ 285 (471)
T COG3033 253 REMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSF 285 (471)
T ss_pred HHHHhhhhhheeeccccceeccc-cEEEecCccH
Confidence 01249999999999889987 8889999854
No 386
>KOG1403|consensus
Probab=98.64 E-value=2.6e-07 Score=85.21 Aligned_cols=252 Identities=13% Similarity=0.081 Sum_probs=148.6
Q ss_pred ChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCC
Q psy10210 144 YQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGI 223 (435)
Q Consensus 144 g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~ 223 (435)
.+|++.++.++.+....-.+. .+..-..+..+.+..-+ +.-+.++++++|+||+.+|++.+|+....
T Consensus 62 chp~VV~A~~kQmat~~tN~R-------Flhd~lv~cA~~l~stl--PeLsvc~F~NSGSEANDLALRLAR~ftkh---- 128 (452)
T KOG1403|consen 62 CHPEVVRAGAKQMATISTNNR-------FLHDELVQCARTLTSTL--PELSVCFFVNSGSEANDLALRLARNFTKH---- 128 (452)
T ss_pred CCHHHHHHHHHHHhHhcccch-------hhHHHHHHHHHHHhhcC--CCceEEEEecCCchhhHHHHHHHHhhccc----
Confidence 389999999988876432221 11111222222222222 22246899999999999999999877543
Q ss_pred CCCeEEEeCCCchhHHHH-HHHc------C--C-E--EEEE-ecCCCc---------------cccHHHHHHHhhc----
Q psy10210 224 SLPEIVLPTTAHPAFDKA-ANYF------G--M-K--VKHI-RLTSSY---------------TVDLAALQSAITG---- 271 (435)
Q Consensus 224 ~~~~viv~~~~~~~~~~~-~~~~------g--~-~--v~~v-p~~~~~---------------~~d~~~l~~~i~~---- 271 (435)
..+|+-+.+|++.... .+.. | . + .++| |+.+.+ ..-.+.+++.+++
T Consensus 129 --qDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~ 206 (452)
T KOG1403|consen 129 --QDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAK 206 (452)
T ss_pred --CceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhc
Confidence 2477778887774332 2211 1 1 2 2222 332111 1112334444432
Q ss_pred --CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCc--cEEEecC
Q psy10210 272 --NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGV--TSISVDT 343 (435)
Q Consensus 272 --~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gv--d~~~~s~ 343 (435)
...+.+..+-++--|.+ +.++++++..+.+|-..|.||++.||-.. |. .-|.|...+. |++++.
T Consensus 207 g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRv-----G~--hyWafq~y~fiPDIVtmg- 278 (452)
T KOG1403|consen 207 GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRV-----GS--HYWAFQTYNFIPDIVTMG- 278 (452)
T ss_pred CCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccccc-----ch--hhhhhhhhccccchheec-
Confidence 23455555666666776 56899999999999999999999988542 21 1234433332 666655
Q ss_pred CCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q psy10210 344 HKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCL 423 (435)
Q Consensus 344 hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~ 423 (435)
|-++..-+++.+. ..+++.+..-.....|. .+||..++++ |...+.|+.+..+.+.++.+++.+.+..++
T Consensus 279 -KpmGNGhPVa~Va-ttkeIA~Af~atgv~YF-NTyGGnPVsC-------Av~laVm~v~e~E~Lq~ha~~vG~~L~~lL 348 (452)
T KOG1403|consen 279 -KPMGNGHPVAAVA-TTKEIAQAFHATGVEYF-NTYGGNPVSC-------AVGLAVMRVCEDENLQEHAQQVGEKLEVLL 348 (452)
T ss_pred -ccCCCCCeeeEEe-ccHHHHHHhccccceeh-hccCCCchhH-------HHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 6544444566644 44555443111111111 1233333333 678899999999999999999999999888
Q ss_pred HhcCC
Q psy10210 424 QNLSD 428 (435)
Q Consensus 424 ~~l~~ 428 (435)
+.++.
T Consensus 349 ~~~k~ 353 (452)
T KOG1403|consen 349 RRLKQ 353 (452)
T ss_pred HHHhh
Confidence 87653
No 387
>KOG3846|consensus
Probab=98.21 E-value=1.1e-05 Score=74.99 Aligned_cols=182 Identities=17% Similarity=0.138 Sum_probs=128.6
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC----chhHHHHHHHcCCEEEE---
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA----HPAFDKAANYFGMKVKH--- 251 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~----~~~~~~~~~~~g~~v~~--- 251 (435)
-+...++.+.|+... ++.+.++-|.-+...+.++-++..+ +-+|+...-+ |+++...++..|+.+..
T Consensus 115 ~il~l~~~iVGA~e~-EvavmNsLTvNlh~Ll~sFyKPTek-----R~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~ 188 (465)
T KOG3846|consen 115 PILPLLAPIVGAQEN-EVAVMNSLTVNLHSLLISFYKPTEK-----RFKILLEKKAFPSDHYAIESQCKLHGISPENSMI 188 (465)
T ss_pred hhhhhhhhhccCCch-hhhhHhhhhhHHHHHHHHhcCCcch-----hhhhhhccCCCCchHHHHHhhhhhcCCChHHheE
Confidence 445567788888776 7888888888888888887766554 3347776654 55577778888876432
Q ss_pred -EecC-CCccccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 252 -IRLT-SSYTVDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 252 -vp~~-~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
+... ....+..+++.+.|.+ ..++|+++..++-||..-++.+|....+..|+++=.|-+++-+ -
T Consensus 189 ~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg-----------N 257 (465)
T KOG3846|consen 189 QIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG-----------N 257 (465)
T ss_pred EecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc-----------C
Confidence 2222 2334667777777764 4688999999999999999999997777779998889887533 2
Q ss_pred CCCCCCCCCccEEEecCCCCCCcc-CCcEEEEEeCCccccccccccCCCCCCC
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTP-KGSSVVLYRDLKYKHCQYFVTSDWPGGN 378 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p-~g~g~il~~~~~~~~~~~~~~~~~~gg~ 378 (435)
.|+...++|||+.+..+.||+.++ .|+|.+.+.. +..+.+......|.|..
T Consensus 258 VpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHe-kh~~~~~prl~GWwgh~ 309 (465)
T KOG3846|consen 258 VPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHE-KHTKESLPRLAGWWGHD 309 (465)
T ss_pred CceEEeecCCceEEEeeecccccCCCccceeeeeh-hhhcchhhHHhhhccCC
Confidence 377788899999999999998755 5566644444 43333333445565543
No 388
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.14 E-value=0.00012 Score=70.19 Aligned_cols=170 Identities=16% Similarity=0.062 Sum_probs=105.3
Q ss_pred CcChhHHHHHHHHHHHHHHHhCCCCCCceEEcC-ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC
Q psy10210 168 DIFPGVCKMEAEVIKMCARMFNGGPETCGCMTS-GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG 246 (435)
Q Consensus 168 ~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~-ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g 246 (435)
+.+....++..++++.+.++++.|.+..|++.. |+|....++...+...... .-|.....+-.++..+-....
T Consensus 43 HRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~------~yv~~g~Ws~~a~~eA~~~~~ 116 (365)
T COG1932 43 HRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGT------DYVDTGAWSEFAIKEAKKVGK 116 (365)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCc------eeEeeeehhHhHHHHHHHhcc
Confidence 445667788888999999999999988887775 5688888888887644321 013333333333444333322
Q ss_pred -CEEEEEecCCC---ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccc
Q psy10210 247 -MKVKHIRLTSS---YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSA 321 (435)
Q Consensus 247 -~~v~~vp~~~~---~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~ 321 (435)
.++........ .-++++... +.++...|..++-.+-+|+- .+...+.. +.++++|.....+..
T Consensus 117 ~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~D~SS~ilsr----- 184 (365)
T COG1932 117 QPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIGS-----DGLLVADASSAILSR----- 184 (365)
T ss_pred cccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCCC-----CceEEEecccHHhcC-----
Confidence 23322222111 223444333 34445557777766778876 22222211 278999988765533
Q ss_pred cCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 322 AGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 322 ~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
++|+.. .|.+.++.+|. .||.|.+++++|+..+.
T Consensus 185 ------~iDvsk--~dviyagaQKn-lGpaGltvvIvr~~~l~ 218 (365)
T COG1932 185 ------PIDVSK--YDVIYAGAQKN-LGPAGLTVVIVRPDLLE 218 (365)
T ss_pred ------CCChhH--cceEEEehhhc-cCccceEEEEEcHHHHh
Confidence 566654 68999999999 69999999888876543
No 389
>KOG1411|consensus
Probab=97.99 E-value=1.3e-05 Score=75.52 Aligned_cols=213 Identities=14% Similarity=0.148 Sum_probs=132.4
Q ss_pred CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC--CCccccHHHHHHHhhc---Cce
Q psy10210 200 SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT--SSYTVDLAALQSAITG---NTV 274 (435)
Q Consensus 200 ~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~--~~~~~d~~~l~~~i~~---~~~ 274 (435)
-+||.|+..+..-+...- +...|.+|+|++....+.....|+.+..+..- .+..+|.+.+.+.+.+ ...
T Consensus 127 lSGTGaLriga~Fl~~f~------~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ 200 (427)
T KOG1411|consen 127 LSGTGALRVGAEFLARFY------PSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSI 200 (427)
T ss_pred ccCcchhhHHHHHHHhhc------cccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcE
Confidence 577888877776553222 23459999999999999999999988777542 5566888887776654 234
Q ss_pred EEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCcc-EEEecCCCCCCcc
Q psy10210 275 MLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVT-SISVDTHKYGFTP 350 (435)
Q Consensus 275 ~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd-~~~~s~hK~~~~p 350 (435)
+++-...+||||+= +.+++|.++.++.+..-+.|.+|-||...-.....+. ---|...|.. .++-|..|.+ |-
T Consensus 201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~a--vR~F~~~g~~~~laQSyAKNM-GL 277 (427)
T KOG1411|consen 201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQA--VRLFVEDGHEILLAQSYAKNM-GL 277 (427)
T ss_pred EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHH--HHHHHHcCCceEeehhhhhhc-ch
Confidence 44445679999976 7899999999999999999999998865211000000 0001122333 4566888974 43
Q ss_pred CC--cEE--EEEeCCccccccccccCCCCCCCCCCCccccCCCchHHH------HHHHHHHHhcHHHHHHHHHHHHHHHH
Q psy10210 351 KG--SSV--VLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIA------TCWAAMMYFGFEAQVWICVRYHFNYK 420 (435)
Q Consensus 351 ~g--~g~--il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia------~~~a~l~~~g~~g~~~~~~~~~~~~~ 420 (435)
+| +|. +++.+.+...+......-...+.|.+|++.|.|-.+.+. ..|. .......+++..+++.+.
T Consensus 278 YgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~----~evk~MadRi~~mR~~L~ 353 (427)
T KOG1411|consen 278 YGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWL----GEVKGMADRIISMRQQLF 353 (427)
T ss_pred hhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHH----HHHHHHHHhhhhhHHHHh
Confidence 33 333 255655543321111122233456678888877654432 2332 123556677777777777
Q ss_pred HHHHh
Q psy10210 421 SCLQN 425 (435)
Q Consensus 421 ~~~~~ 425 (435)
..++.
T Consensus 354 d~L~~ 358 (427)
T KOG1411|consen 354 DALEK 358 (427)
T ss_pred HHhhc
Confidence 76664
No 390
>KOG3843|consensus
Probab=97.94 E-value=2.9e-05 Score=70.72 Aligned_cols=229 Identities=14% Similarity=0.106 Sum_probs=139.4
Q ss_pred HHHHHHHHHHHHHhCCCCC-CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210 175 KMEAEVIKMCARMFNGGPE-TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253 (435)
Q Consensus 175 ~~e~~~~~~la~l~g~~~~-~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp 253 (435)
.+-.++....-.+.|...- .|+++.-..-.++.+++.++|.+.. +...|+-+.-...+-.+..-..|.+.+.|.
T Consensus 57 ~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krp-----kakyiiw~ridqks~~ksi~~agfepiiie 131 (432)
T KOG3843|consen 57 CISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRP-----KAKYIIWLRIDQKSCFKSIIHAGFEPIIIE 131 (432)
T ss_pred HHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCC-----cccEEEEEecchHHHHHHHHhcCCCceeee
Confidence 4444555555566665433 2444444444677788888764332 234588888888888888888899887775
Q ss_pred c--C-CCccccHHHHHHHhhcC-c-eEEEEeCC--CCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCC
Q psy10210 254 L--T-SSYTVDLAALQSAITGN-T-VMLVGSMP--NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPL 326 (435)
Q Consensus 254 ~--~-~~~~~d~~~l~~~i~~~-~-~~v~~~~p--~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~ 326 (435)
- + +....|++.+++.+.+. . +.+++-.. .+..-..|.+++|+.+|..|+++-+|..+||--.--.+...
T Consensus 132 ~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~i---- 207 (432)
T KOG3843|consen 132 NILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKI---- 207 (432)
T ss_pred ccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHH----
Confidence 3 2 33456888888888752 2 22222221 12222338999999999999999999999974322111000
Q ss_pred CCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccccccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHH
Q psy10210 327 PPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFE 406 (435)
Q Consensus 327 ~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~ 406 (435)
.-..+...+|.++.|..|....|.|..++..-+..+.+. ....|+|-...+|+ .....++..+|..
T Consensus 208 -aa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgrasa~ps----------~dllitll~~gqn 273 (432)
T KOG3843|consen 208 -AAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRASASPS----------LDLLITLLSLGQN 273 (432)
T ss_pred -HHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCccccCcc----------HHHHHHHHHhchh
Confidence 011223346889999999988898855544333334333 23334432211111 2455678889999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy10210 407 AQVWICVRYHFNYKSCLQNL 426 (435)
Q Consensus 407 g~~~~~~~~~~~~~~~~~~l 426 (435)
+|.+...+..+.+.++.+++
T Consensus 274 ~f~e~~~eqkemf~~l~~ki 293 (432)
T KOG3843|consen 274 AFKELFGEQKEMFLKLRNKI 293 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99888877777666655544
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.92 E-value=3.3e-05 Score=66.53 Aligned_cols=66 Identities=11% Similarity=0.053 Sum_probs=52.6
Q ss_pred ccccCChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhh
Q psy10210 139 GAVYYYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAR 218 (435)
Q Consensus 139 ~~~~~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~ 218 (435)
|..+.|.+++|+++++++.+....+ .. .+++ ++++|+|+++++.+++.++.++++
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~-v~-----------------------~~pd-~Ivvt~Ga~~al~~l~~~l~dpGD 142 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGR-VK-----------------------FDAD-MIVLSAGATAANEIIMFCIADPGD 142 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCC-Cc-----------------------cchh-heEEcCCHHHHHHHHHHHHcCCCC
Confidence 4466789999999999987753311 00 1333 899999999999999999999998
Q ss_pred hhcCCCCCeEEEeCCCchh
Q psy10210 219 EEKGISLPEIVLPTTAHPA 237 (435)
Q Consensus 219 ~~~g~~~~~viv~~~~~~~ 237 (435)
. |++++|.|++
T Consensus 143 ~--------VlVp~P~Y~~ 153 (153)
T PLN02994 143 A--------FLVPTPYYAA 153 (153)
T ss_pred E--------EEEeCCCCCC
Confidence 8 9999999974
No 392
>KOG1412|consensus
Probab=97.74 E-value=0.001 Score=62.31 Aligned_cols=115 Identities=15% Similarity=0.186 Sum_probs=87.8
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcC-CEEEEEecC--CCccccHHHHHHHhhcC
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFG-MKVKHIRLT--SSYTVDLAALQSAITGN 272 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g-~~v~~vp~~--~~~~~d~~~l~~~i~~~ 272 (435)
++-+-+||.|+.++..-+...-. +..|+++.|++......++..| .++...|.- ++-.+|++.+...+...
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~------~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A 175 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYN------KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA 175 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcc------cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhC
Confidence 45566889999988876643322 2359999999999999999999 456666652 44568998888887653
Q ss_pred c--eEEEEeC-CCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210 273 T--VMLVGSM-PNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLA 316 (435)
Q Consensus 273 ~--~~v~~~~-p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~ 316 (435)
+ ..+++.. .+||||.- +.+.+|++..++.+...+.|-+|-||.-
T Consensus 176 Pe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfAS 225 (410)
T KOG1412|consen 176 PEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFAS 225 (410)
T ss_pred CCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhccccc
Confidence 3 3444443 48999976 7788999999999999999999998865
No 393
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.70 E-value=7.4e-05 Score=71.11 Aligned_cols=150 Identities=15% Similarity=0.118 Sum_probs=84.3
Q ss_pred CCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC-CCccccHHHHHHHhhc
Q psy10210 193 ETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT-SSYTVDLAALQSAITG 271 (435)
Q Consensus 193 ~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~ 271 (435)
+.-+++.+|+|+.+..++.++...... ..+--.|+...|.|+.|......+.-..-...-| ..+. + .-++
T Consensus 66 gr~IV~GtGsTQL~~AalyALSp~~~~--~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~Gda~~~~-~------~~~~ 136 (363)
T PF04864_consen 66 GRYIVFGTGSTQLFNAALYALSPNASP--SSSPASVVAAAPYYSSYPEQTDFFDSRLYKWAGDASNFK-N------SDNP 136 (363)
T ss_dssp TSEEEEECHHHHHHHHHHHHHCHHT-T--TSSSEEEEE-SS--CHHHHHCCCT-BTTEEEEEECCCGT-T-------S-C
T ss_pred CcEEEEcCCHHHHHHHHHHhcCCCCCC--CCCCceeEecCCCccchHHHHHhccccCccccccHHhhc-c------CCCC
Confidence 347999999999999999998654111 0112258999999999998887775433333322 2221 1 1113
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCC-CCcc
Q psy10210 272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKY-GFTP 350 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~-~~~p 350 (435)
.+..=+++.||||.|.+. +.+ ++.-+..+|.|-+|-- |. .. |+... ..=|++.++..|. |.++
T Consensus 137 ~~~IElVTSPNNPDG~lr--~~V---~~g~~~k~I~D~AYYW---Ph--yT-----pI~~~-aD~DiMLFT~SK~TGHAG 200 (363)
T PF04864_consen 137 SPYIELVTSPNNPDGQLR--EAV---LNGSSGKVIHDLAYYW---PH--YT-----PITAP-ADHDIMLFTLSKLTGHAG 200 (363)
T ss_dssp CGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-S---TT--TS--------S--B--SEEEEEHHHHCS-GG
T ss_pred CCeEEEEeCCCCCccccc--chh---cCCCCcceeeeeeeec---cc--cc-----ccCCC-CCCceEEEEEecccCccc
Confidence 456678899999999982 111 2334566799999832 21 11 22211 1238899998895 7778
Q ss_pred CCcEEEEEeCCcccccc
Q psy10210 351 KGSSVVLYRDLKYKHCQ 367 (435)
Q Consensus 351 ~g~g~il~~~~~~~~~~ 367 (435)
...||.+++|++..+.+
T Consensus 201 SR~GWAlVKD~~Va~kM 217 (363)
T PF04864_consen 201 SRFGWALVKDEEVAKKM 217 (363)
T ss_dssp G-EEEEEES-HHHHHHH
T ss_pred cccceeeecCHHHHHHH
Confidence 88999999999876653
No 394
>KOG1405|consensus
Probab=97.40 E-value=0.0011 Score=63.15 Aligned_cols=141 Identities=14% Similarity=0.139 Sum_probs=90.5
Q ss_pred HHHHHHHhhc------CceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC--CCCCC
Q psy10210 262 LAALQSAITG------NTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY--PLPPF 329 (435)
Q Consensus 262 ~~~l~~~i~~------~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~--~~~~~ 329 (435)
++++|+.|.+ .+.++++...+..-|-- +.++.+.+++++|++.++|||++.|.-. .|- .+.-+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGa-----TGk~WaHehw 329 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGA-----TGKFWAHEHW 329 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCc-----cCceeeehhc
Confidence 5666666642 24667777666655543 7799999999999999999999988632 121 11122
Q ss_pred CCCCCCccEEEecCCCCCCccCCcEEEEEeCCccccc-cccccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHH
Q psy10210 330 DFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHC-QYFVTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQ 408 (435)
Q Consensus 330 d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~-~~~~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~ 408 (435)
+.. ..+|++++| .|+. +|. .+-+++++-. .|.....|.|.- +-. ..+-.+.+.+.++++
T Consensus 330 ~l~-~PpD~vTFS-KK~q-----~gG-ffh~~~frpn~pYrifNTWmGdP-----------~k~-lll~~vv~~I~~~~L 389 (484)
T KOG1405|consen 330 NLD-SPPDVVTFS-KKFQ-----TGG-FFHDEEFRPNEPYRIFNTWMGDP-----------SKN-LLLEEVVQEIKREDL 389 (484)
T ss_pred CCC-CCccceehh-hhhh-----cCc-cccCcccCCCchHHHhhhhcCCh-----------HHH-HHHHHHHHHHhHHHH
Confidence 222 235888887 2332 122 4555666544 555667777641 112 245567788889999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q psy10210 409 VWICVRYHFNYKSCLQNLS 427 (435)
Q Consensus 409 ~~~~~~~~~~~~~~~~~l~ 427 (435)
.+.+++....+...+.+|+
T Consensus 390 l~n~~~vG~~l~~gL~~Lq 408 (484)
T KOG1405|consen 390 LNNVAHVGKALLKGLLELQ 408 (484)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999888777666554
No 395
>KOG0630|consensus
Probab=96.52 E-value=0.021 Score=56.75 Aligned_cols=187 Identities=15% Similarity=0.134 Sum_probs=115.8
Q ss_pred CCeEEEeCCCchhH-HHHHHHcCCEEEEEec--C--C---CccccHHHHHHHhhc------CceEEEEeCCCCCcccccC
Q psy10210 225 LPEIVLPTTAHPAF-DKAANYFGMKVKHIRL--T--S---SYTVDLAALQSAITG------NTVMLVGSMPNFPYGTMDD 290 (435)
Q Consensus 225 ~~~viv~~~~~~~~-~~~~~~~g~~v~~vp~--~--~---~~~~d~~~l~~~i~~------~~~~v~~~~p~nptG~~~~ 290 (435)
.|.++++...|.-. .-+++.+|+....|.+ + . .|++|...+++.|++ ++.+++..-+.+-.|..|.
T Consensus 231 aPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDm 310 (838)
T KOG0630|consen 231 APTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDM 310 (838)
T ss_pred CceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHH
Confidence 68899998888774 4567788985444422 2 2 358999999999874 3455556667777899999
Q ss_pred HHHHHHHHHHcC-CcEEEeccccchhhhcccccCCCCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCcccccccc
Q psy10210 291 IGAIAKLGEKYG-IPVHVDCCLGGFLAPFMSAAGYPLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYKHCQYF 369 (435)
Q Consensus 291 i~~i~~la~~~~-~~livD~~~~~~~~~~~~~~g~~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~~~~~~ 369 (435)
+-+|.++|++++ .|+|.-.- +--.+.|.+... .......-+|++++...-|++.|. .-+++...+---...
T Consensus 311 i~kildi~eahakfWLHasGh-aiAALt~aepnn----il~HV~eqldSMal~ialWLGiPS-aPiV~LHRPleg~aa-- 382 (838)
T KOG0630|consen 311 ILKILDICEAHAKFWLHASGH-AIAALTCAEPNN----ILGHVEEQLDSMALNIALWLGIPS-APIVLLHRPLEGSAA-- 382 (838)
T ss_pred HHHHHHHHHHhhheeEeeccc-hhhheeecCccc----chhHHHHHHhhccchhHHHhCCCC-CceEEeecccccccc--
Confidence 999999999996 99997642 212222322110 111112235999999999965554 445444433211110
Q ss_pred ccCCCCCCCCCCCccccCCCchHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHhcCC
Q psy10210 370 VTSDWPGGNYGSPSVSGSRSGGIIATCWAAMMYFGFEAQVWICVRYHFNYKSCLQNLSD 428 (435)
Q Consensus 370 ~~~~~~gg~~~~~~~~gsr~~~~ia~~~a~l~~~g~~g~~~~~~~~~~~~~~~~~~l~~ 428 (435)
. .+.+-.+ -++.-. ....|.+++++|...+.+++...-...+-+++.+..
T Consensus 383 --S-----afesdpi-~rekLd-aLp~Wta~q~LggKaIadmienAFll~kilfe~aSa 432 (838)
T KOG0630|consen 383 --S-----AFESDPI-LREKLD-ALPLWTALQALGGKAIADMIENAFLLCKILFEGASA 432 (838)
T ss_pred --h-----hcccChH-HHHhhc-cchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 0011111 112222 247899999999999999888776666666665443
No 396
>KOG2790|consensus
Probab=96.31 E-value=0.12 Score=48.26 Aligned_cols=172 Identities=17% Similarity=0.126 Sum_probs=108.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCceEEc-CChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCE
Q psy10210 170 FPGVCKMEAEVIKMCARMFNGGPETCGCMT-SGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMK 248 (435)
Q Consensus 170 ~~~~~~~e~~~~~~la~l~g~~~~~~~~~t-~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~ 248 (435)
+....++..+....+.++++.++...+++. .|||.-+......+.. .+.|-..+-|+..+..--++.++.++-...
T Consensus 47 sk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~g---lK~g~~AdYiVTGsWS~KA~~EAkk~~~~~ 123 (370)
T KOG2790|consen 47 SKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIG---LKHGRCADYVVTGSWSAKAAEEAKKYGTPN 123 (370)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhc---cccCCccceEEeccccHHHHHHHHhhCCce
Confidence 345566777777888999999887666555 5666655555444432 112223456888877777787777665554
Q ss_pred EEEEecC-CC--ccccHHHHHHHhhcCceEEEEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCC
Q psy10210 249 VKHIRLT-SS--YTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGY 324 (435)
Q Consensus 249 v~~vp~~-~~--~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~ 324 (435)
.+..+.. -+ --+|.+.++. +++...|+.|.-.+-+|+- +++. +-.-.|.+++.|-.. .|+
T Consensus 124 ~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSS-nfl--------- 187 (370)
T KOG2790|consen 124 IVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSS-NFL--------- 187 (370)
T ss_pred EEeccccccccCcCCChhhccc--CCCccEEEEecCceeeceecCCCC----CCCCCCceEEEeccc-chh---------
Confidence 5444443 11 1245554442 3455688888777778875 3333 223357788888653 221
Q ss_pred CCCCCCCCCCCccEEEecCCCCCCccCCcEEEEEeCCccc
Q psy10210 325 PLPPFDFSLPGVTSISVDTHKYGFTPKGSSVVLYRDLKYK 364 (435)
Q Consensus 325 ~~~~~d~~~~gvd~~~~s~hK~~~~p~g~g~il~~~~~~~ 364 (435)
..|+|+...| .+.....|. .||.|.-++++|+.-+-
T Consensus 188 -SrpvDvsk~g--vi~aGAQKN-~G~aG~Tvvivr~dllg 223 (370)
T KOG2790|consen 188 -SRPVDVSKFG--VIFAGAQKN-VGPAGVTVVIVRKDLLG 223 (370)
T ss_pred -cCCccchhcc--eEEeccccc-cCccccEEEEEehhhhc
Confidence 2378887765 577888999 68999999888876543
No 397
>PLN02672 methionine S-methyltransferase
Probab=89.65 E-value=22 Score=40.40 Aligned_cols=192 Identities=10% Similarity=0.067 Sum_probs=107.8
Q ss_pred HHHHhhhchhhHHHHHHHHHHHHHHHHhhhhhcCCCCccccCCCCCCCCHHH--HHHHHHHHHhCCCCCCCCCccccccc
Q psy10210 65 VFKLARKIPAVRKKLEEETGKVAKLFQDDIKQNNAGLEYFLELPSQGRNRLE--ILELVSNYLARGHYDWKHGRVSGAVY 142 (435)
Q Consensus 65 ~~~~~~~lp~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (435)
++..-.+.|..-+.|.+-++.-..++..++.. .| -+.....+. .+..+...+.. ...+.|.+.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 425 (1082)
T PLN02672 361 VYSCQLRQPNQVKTIFKFLKNGFHEVSGSLDL-----SF----EDESVADEKIPFLAYLASALKG------LSYFPCEPP 425 (1082)
T ss_pred hhhhhhcCchHHHHHHHHHHccchhhhhhccc-----cc----cccccchhhccHHHHHHHHHcc------CCCCCCCCC
Confidence 44555566766565665554333333333222 11 111122222 36677776664 346667788
Q ss_pred CChHhHHHHHHHHHHhhcCCCCCCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcC
Q psy10210 143 YYQQDLVDLLTEVFGLTSYTNPLHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKG 222 (435)
Q Consensus 143 ~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g 222 (435)
.|...+|..++..+..+.+. |+.+ +++++.++-..|+..+++.+.-.-...
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 476 (1082)
T PLN02672 426 AGSKRFRNLIAGFMRIYHHI-PLTP--------------------------DNVVVFPSRAVAIENALRLFSPRLAIV-- 476 (1082)
T ss_pred ccchHHHHHHHHHHHHhcCC-cCCc--------------------------cceEEeccHHHHHHHHHHhhChHHHhh--
Confidence 89999999999999887543 4433 388999999999988887653221100
Q ss_pred CCCCeEEEeCCCchhHHHHHHHcC----------CEEEEEecCCCccccHHHHHHHhhc-CceEEEEeCCCCCcccccCH
Q psy10210 223 ISLPEIVLPTTAHPAFDKAANYFG----------MKVKHIRLTSSYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDDI 291 (435)
Q Consensus 223 ~~~~~viv~~~~~~~~~~~~~~~g----------~~v~~vp~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~i 291 (435)
+ --++..-+.-|..+....| +.|++-|-. -+.+.+.+++ ++.+|+..-..+.--+..-+
T Consensus 477 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (1082)
T PLN02672 477 ---D-EHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMADFEMRTSTAF 546 (1082)
T ss_pred ---h-hhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccchhhhhHHHH
Confidence 0 0011122233444333332 122222321 1245555554 56677765444433333568
Q ss_pred HHHHHHHHHcCCcEEEecc
Q psy10210 292 GAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 292 ~~i~~la~~~~~~livD~~ 310 (435)
+.|.+.+++.|++++.|..
T Consensus 547 ~~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 547 EHLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHHHhhCcEEEEehh
Confidence 8899999999999999974
No 398
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=87.35 E-value=12 Score=36.85 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=60.4
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCch------hHHHHHHHcCCEEEEEecCCCccccHHHHHH
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHP------AFDKAANYFGMKVKHIRLTSSYTVDLAALQS 267 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~------~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~ 267 (435)
++++-.|||-.|..++..+....+.. +..+.-++.+. ...+.++.+|+....+.++ .+.+.+
T Consensus 61 D~iV~lSGGkDSs~la~ll~~~~gl~------~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d------~~~~~~ 128 (343)
T TIGR03573 61 DCIIGVSGGKDSTYQAHVLKKKLGLN------PLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN------PETFRK 128 (343)
T ss_pred CEEEECCCCHHHHHHHHHHHHHhCCc------eEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC------HHHHHH
Confidence 48899999999998875443333322 33345555543 2556667789888887754 333332
Q ss_pred HhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEeccccc
Q psy10210 268 AITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDCCLGG 313 (435)
Q Consensus 268 ~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~~~~~ 313 (435)
....... ...+|.... .....+.++|+++|+.+++.+-.++
T Consensus 129 l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 129 LQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred HHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 2221111 112222222 3457788999999999998765544
No 399
>KOG1465|consensus
Probab=80.40 E-value=55 Score=31.23 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=64.0
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC--CCchhHHHHHH--HcCCEEEEEecCCCccccHHHHHHHh
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT--TAHPAFDKAAN--YFGMKVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~--~~~~~~~~~~~--~~g~~v~~vp~~~~~~~d~~~l~~~i 269 (435)
.++++|.|.+..+..-++.+.+.+++ -.|++.+ |.+.+...+.. ..|++...+| | .++-..+
T Consensus 163 nEviLT~g~SrTV~~FL~~A~kk~Rk------f~viVaE~~p~~qgH~~Ak~la~~giettVI~-------d-aaVfA~M 228 (353)
T KOG1465|consen 163 NEVILTLGSSRTVENFLKHAAKKGRK------FRVIVAEGAPNNQGHELAKPLAQAGIETTVIP-------D-AAVFAMM 228 (353)
T ss_pred CceEEecCccHHHHHHHHHHHhccCc------eEEEEeecCCcccchHhhHHHHHcCCeeEEec-------c-HHHHHHh
Confidence 37999999888888777776654432 3466654 33333333322 4477776666 1 2334444
Q ss_pred hcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210 270 TGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 270 ~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~ 310 (435)
.+-.+.|+.++.-.+.|.+ .-...++..|++|.++++|=+-
T Consensus 229 srVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlAp 272 (353)
T KOG1465|consen 229 SRVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLAP 272 (353)
T ss_pred hhcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEecc
Confidence 4444566666555555555 4567888999999999998543
No 400
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=77.42 E-value=17 Score=33.01 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=78.4
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCC------CCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHH
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGI------SLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSA 268 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~------~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~ 268 (435)
-+.+-|||-.++..+..++..-.+- ... ..+....-.|+.......++..|+.+...+++....-..+++.++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~G~eV-~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~ 81 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEEGHEV-VYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEA 81 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHcCCee-EEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHH
Confidence 3677899999988877776532221 000 001112222233335666777899998888764344467788877
Q ss_pred hhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEeccccchhhhcccccCCCCC--CCCCCCCCccEEEec
Q psy10210 269 ITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCCLGGFLAPFMSAAGYPLP--PFDFSLPGVTSISVD 342 (435)
Q Consensus 269 i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~~~~~~~~~~~~~g~~~~--~~d~~~~gvd~~~~s 342 (435)
+.. +...|+ +|.+ .....+-.+|++.|+-+..=-- |.++. --.+-..|.+.+.++
T Consensus 82 l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~PLW------------g~d~~ell~e~~~~Gf~~~Iv~ 142 (223)
T COG2102 82 LRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYAPLW------------GRDPEELLEEMVEAGFEAIIVA 142 (223)
T ss_pred HHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEeeccc------------CCCHHHHHHHHHHcCCeEEEEE
Confidence 765 334554 6777 6788899999999876543111 11000 012223466777777
Q ss_pred CCCCCCc
Q psy10210 343 THKYGFT 349 (435)
Q Consensus 343 ~hK~~~~ 349 (435)
..|.|+.
T Consensus 143 Vsa~gL~ 149 (223)
T COG2102 143 VSAEGLD 149 (223)
T ss_pred EeccCCC
Confidence 7777643
No 401
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=76.13 E-value=54 Score=31.77 Aligned_cols=98 Identities=15% Similarity=0.109 Sum_probs=55.1
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcC-c
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGN-T 273 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~-~ 273 (435)
.++..++|..+..+|..+.. .|+ +-.|+++...-..-...++.+|++++.++-+ ...+..++.+.+.++ +
T Consensus 53 ~vv~aSsGN~g~alA~~a~~------~G~-~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~--~~~~~~~~~~~l~~~~~ 123 (316)
T cd06448 53 HVVCSSGGNAGLAAAYAARK------LGV-PCTIVVPESTKPRVVEKLRDEGATVVVHGKV--WWEADNYLREELAENDP 123 (316)
T ss_pred eEEEeCCcHHHHHHHHHHHH------cCC-CEEEEECCCCCHHHHHHHHHcCCEEEEECCc--hHHHHHHHHHHHHhccC
Confidence 56666777888777766543 121 1346777766666778888999999988632 111122333334333 2
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 274 VMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 274 ~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
...++...+||.+.--.-.--.|++++.
T Consensus 124 ~~~~~~~~~n~~~~~g~~t~~~Ei~~q~ 151 (316)
T cd06448 124 GPVYVHPFDDPLIWEGHSSMVDEIAQQL 151 (316)
T ss_pred CcEEeCCCCCchhhccccHHHHHHHHHc
Confidence 4556555556655442222344555544
No 402
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=73.14 E-value=31 Score=34.29 Aligned_cols=86 Identities=12% Similarity=0.023 Sum_probs=53.6
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++-.++|..++.+|..+.. .|-. ..|++++..-..-....+.+|++++.++...+..-..+..++...+++.
T Consensus 113 ~vV~aSsGN~G~alA~~a~~-~G~~------~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~ 185 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAM-KGYK------MILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPD 185 (368)
T ss_pred EEEEeCCchHHHHHHHHHHH-cCCC------EEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCC
Confidence 56777888888888887643 2221 3467777666667788899999999887432211223444444444445
Q ss_pred EEEEeCCCCCccc
Q psy10210 275 MLVGSMPNFPYGT 287 (435)
Q Consensus 275 ~v~~~~p~nptG~ 287 (435)
.+++...+||.+.
T Consensus 186 ~~~~~q~~np~~~ 198 (368)
T PLN02556 186 AFMLQQFSNPANT 198 (368)
T ss_pred CCccCCCCCHHHH
Confidence 5666656676544
No 403
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=71.81 E-value=22 Score=30.08 Aligned_cols=86 Identities=14% Similarity=0.186 Sum_probs=58.5
Q ss_pred CCeEEEeCCCchh-------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHH
Q psy10210 225 LPEIVLPTTAHPA-------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKL 297 (435)
Q Consensus 225 ~~~viv~~~~~~~-------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~l 297 (435)
+|+|++..+...+ ...+++..|++++..+...+ --+.+..++.++.-.|.+|.-. -|..+..+++.+.
T Consensus 12 rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~t---p~e~v~aA~~~dv~vIgvSsl~--g~h~~l~~~lve~ 86 (143)
T COG2185 12 RPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQT---PEEAVRAAVEEDVDVIGVSSLD--GGHLTLVPGLVEA 86 (143)
T ss_pred CceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCC---HHHHHHHHHhcCCCEEEEEecc--chHHHHHHHHHHH
Confidence 5778888875444 44556666999988876432 2456677778777777777543 3456889999999
Q ss_pred HHHcCCcEEEeccccchhhh
Q psy10210 298 GEKYGIPVHVDCCLGGFLAP 317 (435)
Q Consensus 298 a~~~~~~livD~~~~~~~~~ 317 (435)
++++|.-=+. ++.|+..|
T Consensus 87 lre~G~~~i~--v~~GGvip 104 (143)
T COG2185 87 LREAGVEDIL--VVVGGVIP 104 (143)
T ss_pred HHHhCCcceE--EeecCccC
Confidence 9999864443 45555553
No 404
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=71.59 E-value=64 Score=30.93 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=71.4
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC--chh--HHHHHHHcCCEEEEEecCCCc--cccHHHHHHH
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTA--HPA--FDKAANYFGMKVKHIRLTSSY--TVDLAALQSA 268 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~--~~~--~~~~~~~~g~~v~~vp~~~~~--~~d~~~l~~~ 268 (435)
+-++|-||.+|+..-..++.... .|. +...++..+. |.. ........|+.++.++-..+. ....+.+.+.
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~---lGl-~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~ 140 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAK---LGL-KCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEE 140 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHh---cCC-cEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHH
Confidence 57999999999998877764322 222 2334444443 221 333455679999988865555 3344555555
Q ss_pred hhc--CceEEEEeCCCCCcccc---cCHHHHHHHHHH-cCCcEEEeccccchh
Q psy10210 269 ITG--NTVMLVGSMPNFPYGTM---DDIGAIAKLGEK-YGIPVHVDCCLGGFL 315 (435)
Q Consensus 269 i~~--~~~~v~~~~p~nptG~~---~~i~~i~~la~~-~~~~livD~~~~~~~ 315 (435)
+.+ +...++...+.||.|.. .-..||.+-+++ ..+-.+|.++-++..
T Consensus 141 ~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~gT 193 (323)
T COG2515 141 VRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGGT 193 (323)
T ss_pred HHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcch
Confidence 543 34466666668885555 666777777776 456666776655443
No 405
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=69.20 E-value=21 Score=34.19 Aligned_cols=88 Identities=16% Similarity=0.080 Sum_probs=54.2
Q ss_pred CCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC-ccccHHHHHHHhh
Q psy10210 192 PETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YTVDLAALQSAIT 270 (435)
Q Consensus 192 ~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~-~~~d~~~l~~~i~ 270 (435)
+...++=.++|.-++-+|+-+... +.+ -.+++|+..-....+..+.+|++++.+|..++ ..--.+.+++...
T Consensus 61 pG~tIVE~TSGNTGI~LA~vaa~~-Gy~------~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~ 133 (300)
T COG0031 61 PGGTIVEATSGNTGIALAMVAAAK-GYR------LIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA 133 (300)
T ss_pred CCCEEEEcCCChHHHHHHHHHHHc-CCc------EEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH
Confidence 344667678888899888877542 222 23667776666688889999999999997433 1112333344444
Q ss_pred cCce-EEEEe---CCCCCcc
Q psy10210 271 GNTV-MLVGS---MPNFPYG 286 (435)
Q Consensus 271 ~~~~-~v~~~---~p~nptG 286 (435)
+.+. ++..+ +|.||-.
T Consensus 134 ~~p~~~~~~~Qf~NpaN~~a 153 (300)
T COG0031 134 EIPGYAVWLNQFENPANPEA 153 (300)
T ss_pred hCCCceEchhhcCCCccHHH
Confidence 4443 66654 4445433
No 406
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=68.91 E-value=33 Score=31.47 Aligned_cols=65 Identities=18% Similarity=0.233 Sum_probs=46.0
Q ss_pred HHHHHHHcCCEEEEE-ecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHI-RLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~v-p~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
+.++++..|.++..+ +...+..--.+.+++++..+..+|++..... +....+.+-|++.|++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~-----~~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDP-----DSLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSST-----TTTHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCH-----HHHHHHHHHHhhcCceEEE
Confidence 456677789999886 5443333445677888888888888776543 2355667778899999886
No 407
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=68.63 E-value=54 Score=30.78 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=43.3
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHH---HHHHhhc-CceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAA---LQSAITG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~---l~~~i~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
+..+++ .|.+|.-.++.+|+++..+.. ++..+.+.+ +.+.+.+ +.++|+.. ++.+. +.+-.++++
T Consensus 170 ~~~~v~---~H~af~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v~~if~e-~~~~~------~~~~~la~~ 238 (266)
T cd01018 170 QRAFMV---YHPAWGYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGVRVVFVQ-PQFST------KSAEAIARE 238 (266)
T ss_pred CCeEEE---ECchhHHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCCCEEEEc-CCCCc------HHHHHHHHH
Confidence 334555 466677788999999876532 334454444 4445554 56666655 44333 234477888
Q ss_pred cCCcEEE
Q psy10210 301 YGIPVHV 307 (435)
Q Consensus 301 ~~~~liv 307 (435)
.|+.++.
T Consensus 239 ~g~~v~~ 245 (266)
T cd01018 239 IGAKVVT 245 (266)
T ss_pred cCCeEEE
Confidence 8887765
No 408
>PLN00011 cysteine synthase
Probab=67.89 E-value=63 Score=31.40 Aligned_cols=53 Identities=19% Similarity=0.212 Sum_probs=39.7
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++..++|..+..+|..+.. .|+ +-.|++|...-..-....+.+|++++.++-
T Consensus 71 ~vv~aSsGN~g~alA~~a~~------~G~-~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 71 TLIEATAGNTGIGLACIGAA------RGY-KVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEEeCCChHHHHHHHHHHH------cCC-eEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 57777888888888887654 222 134788877767788889999999988874
No 409
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=67.39 E-value=4.2 Score=42.93 Aligned_cols=39 Identities=28% Similarity=0.328 Sum_probs=34.7
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccccchh
Q psy10210 277 VGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGFL 315 (435)
Q Consensus 277 ~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~~ 315 (435)
..=+|++..|..++++++++-|++.||-||+|-+++-|-
T Consensus 202 g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 202 GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 344788999999999999999999999999999998763
No 410
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=66.95 E-value=1.2e+02 Score=28.83 Aligned_cols=56 Identities=21% Similarity=0.248 Sum_probs=36.6
Q ss_pred HcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 244 YFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 244 ~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
..|..+..+. +.+ .-. .....++++..+|+++. +|...++-+.++.++++|+.+|.
T Consensus 154 ~ig~~~~~~~--d~~-~~~-~~~~~~~~~Dv~i~iS~----sG~t~e~i~~a~~ak~~ga~vIa 209 (281)
T COG1737 154 RIGLNVVALS--DTH-GQL-MQLALLTPGDVVIAISF----SGYTREIVEAAELAKERGAKVIA 209 (281)
T ss_pred HcCCceeEec--chH-HHH-HHHHhCCCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCcEEE
Confidence 3466666554 111 111 23344566777777776 67788899999999999887763
No 411
>PLN02565 cysteine synthase
Probab=65.71 E-value=66 Score=31.27 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=49.5
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++-.|+|..+..+|+.+-. .+ + +-.|++|...-..-...++.+|++++.++-+.+..-..+..++...+++.
T Consensus 69 ~vv~aSsGN~g~alA~~a~~-~G-----~-~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~~~a~~l~~~~~~ 141 (322)
T PLN02565 69 VLIEPTSGNTGIGLAFMAAA-KG-----Y-KLIITMPASMSLERRIILLAFGAELVLTDPAKGMKGAVQKAEEILAKTPN 141 (322)
T ss_pred EEEEECCChHHHHHHHHHHH-cC-----C-eEEEEeCCCCcHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCCC
Confidence 36667889999888886643 22 2 12477777777778888999999999876422111122333333333334
Q ss_pred EEEEeCCCCC
Q psy10210 275 MLVGSMPNFP 284 (435)
Q Consensus 275 ~v~~~~p~np 284 (435)
.+++...+||
T Consensus 142 ~~~~~q~~n~ 151 (322)
T PLN02565 142 SYILQQFENP 151 (322)
T ss_pred cEeecccCCH
Confidence 4555544444
No 412
>PLN03013 cysteine synthase
Probab=65.30 E-value=25 Score=35.65 Aligned_cols=84 Identities=12% Similarity=0.072 Sum_probs=52.9
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++-.++|..++-+|+.+.. .|+ +-.|++|+..-..-...++.+|++++.++.+.+..-..+..+++..++..
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~------~G~-~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g 249 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS------RGY-RLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPD 249 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH------cCC-CEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCC
Confidence 46777889999988887654 222 12477788777778889999999999887432211113334444444334
Q ss_pred EEEEeCCCCCc
Q psy10210 275 MLVGSMPNFPY 285 (435)
Q Consensus 275 ~v~~~~p~npt 285 (435)
.+++....||.
T Consensus 250 ~~~~~qy~Np~ 260 (429)
T PLN03013 250 AYMLQQFDNPA 260 (429)
T ss_pred eEeCCCCCCHH
Confidence 55555555653
No 413
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=64.81 E-value=67 Score=30.12 Aligned_cols=74 Identities=19% Similarity=0.245 Sum_probs=44.8
Q ss_pred CeEEEeCCCchhHHHHHHHcCCEEEEEe----c-CCCccccHHHHHHHh---hc-CceEEEEeCCCCCcccccCHHHHHH
Q psy10210 226 PEIVLPTTAHPAFDKAANYFGMKVKHIR----L-TSSYTVDLAALQSAI---TG-NTVMLVGSMPNFPYGTMDDIGAIAK 296 (435)
Q Consensus 226 ~~viv~~~~~~~~~~~~~~~g~~v~~vp----~-~~~~~~d~~~l~~~i---~~-~~~~v~~~~p~nptG~~~~i~~i~~ 296 (435)
..+++ .|+++.-.++.+|++.+.+. . ..+..+.+.++.+.+ .+ +.++|+.+. +.+. ...+.+.+
T Consensus 154 ~~~v~---~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~-~~~~---k~~~~l~~ 226 (264)
T cd01020 154 APVAA---TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALIVNP-QQAS---SATTNITG 226 (264)
T ss_pred CeEEE---eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEEeCC-CCCc---HHHHHHHH
Confidence 34555 57888888999999876431 1 124445565555544 44 456555544 3322 23456667
Q ss_pred HHHHcCCcEE
Q psy10210 297 LGEKYGIPVH 306 (435)
Q Consensus 297 la~~~~~~li 306 (435)
++++.|+.++
T Consensus 227 la~~~~~~v~ 236 (264)
T cd01020 227 LAKRSGVPVV 236 (264)
T ss_pred HHHHcCCCEE
Confidence 8999998774
No 414
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=64.42 E-value=74 Score=28.83 Aligned_cols=73 Identities=14% Similarity=0.195 Sum_probs=44.1
Q ss_pred EEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 229 VLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 229 iv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
++..+.-....+.++..|++++..+.+ |.+.|.+++..-..++++..+.+ ....+....+.+.|++.|+..++
T Consensus 27 ~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d~v~~~~~~~~-~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 27 ALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALKGVDAVFSVTPPSH-PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHTTCSEEEEESSCSC-CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred EEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHcCCceEEeecCcch-hhhhhhhhhHHHhhhccccceEE
Confidence 334444333444556679987655432 78999999985444444333333 44456678899999999987775
No 415
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=62.52 E-value=59 Score=29.80 Aligned_cols=102 Identities=16% Similarity=0.211 Sum_probs=60.3
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcC------CCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKG------ISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g------~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i 269 (435)
++..|||-.+...+.++... .+. .+ ...+......+.+......|+..|+.++.+.+.....-..+++.+.+
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V-~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l 81 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEV-ISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQL 81 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-Cee-EEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHH
Confidence 46779999999999988775 332 11 00011111112223466778888999887776532233355555555
Q ss_pred hc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEE
Q psy10210 270 TG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 270 ~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~li 306 (435)
.+ ....|+ +|.+ +....+-++|++-|+..+
T Consensus 82 ~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 82 GELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 43 344444 5666 346777888888876544
No 416
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=62.12 E-value=67 Score=29.46 Aligned_cols=96 Identities=15% Similarity=0.285 Sum_probs=60.1
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEE---EeCC---------CchhHHHHHHHcCCEEEEEecCCCccccHH
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIV---LPTT---------AHPAFDKAANYFGMKVKHIRLTSSYTVDLA 263 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~vi---v~~~---------~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~ 263 (435)
++.-|||-.+...+.++..+ .+. ..+ ++.. .+......|+..|+.++.++.+....--.+
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v-------~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e 75 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEV-------ISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVE 75 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-Cee-------EEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHH
Confidence 46779999999999998876 432 111 2221 122356778888999888776533333456
Q ss_pred HHHHHhhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEE
Q psy10210 264 ALQSAITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 264 ~l~~~i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~li 306 (435)
++.+++.+ ....++ +|.+ +....+-.+|.+.|+..+
T Consensus 76 ~l~~~l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 76 ELKGILHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHHHHHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 67666654 333444 5666 345677788888876543
No 417
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=58.74 E-value=1.4e+02 Score=28.39 Aligned_cols=101 Identities=16% Similarity=0.041 Sum_probs=56.3
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCC-ccccH-HHHHHHhhcC
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSS-YTVDL-AALQSAITGN 272 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~-~~~d~-~~l~~~i~~~ 272 (435)
.++..++|..+..+|..+.. .|+ +-.|+++...-..-....+.+|++++.++-+.. ..-+. +..++...++
T Consensus 55 ~vv~~SsGN~g~alA~~a~~------~G~-~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~~~a~~~~~~~ 127 (291)
T cd01561 55 TIIEPTSGNTGIGLAMVAAA------KGY-RFIIVMPETMSEEKRKLLRALGAEVILTPEAEADGMKGAIAKARELAAET 127 (291)
T ss_pred EEEEeCCChHHHHHHHHHHH------cCC-eEEEEECCCCCHHHHHHHHHcCCEEEEeCCCCcCCHHHHHHHHHHHHhhC
Confidence 46777888888887776543 222 234777777677778888999999998874321 11111 1222222223
Q ss_pred ceEEEEeCCCCCcccccCH-HHHHHHHHHcC
Q psy10210 273 TVMLVGSMPNFPYGTMDDI-GAIAKLGEKYG 302 (435)
Q Consensus 273 ~~~v~~~~p~nptG~~~~i-~~i~~la~~~~ 302 (435)
....++...+||.+..... .-..|++++-+
T Consensus 128 ~~~~~~~~~~~p~~~~g~~~t~~~Ei~~ql~ 158 (291)
T cd01561 128 PNAFWLNQFENPANPEAHYETTAPEIWEQLD 158 (291)
T ss_pred CCcEEecCCCCchHHHHHHHHHHHHHHHHcC
Confidence 2445554445776654333 22244555443
No 418
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=58.61 E-value=47 Score=32.05 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=30.7
Q ss_pred EEeCCCCCcccc-cCHHHHHHHHHHcCCcEEEeccccch
Q psy10210 277 VGSMPNFPYGTM-DDIGAIAKLGEKYGIPVHVDCCLGGF 314 (435)
Q Consensus 277 ~~~~p~nptG~~-~~i~~i~~la~~~~~~livD~~~~~~ 314 (435)
++-+++=|.|.- +...+|.++|++.|+.+++|..-..+
T Consensus 133 VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~~L 171 (310)
T COG1105 133 VVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGEAL 171 (310)
T ss_pred EEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChHHH
Confidence 445566778877 78899999999999999999865444
No 419
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.14 E-value=40 Score=27.52 Aligned_cols=72 Identities=24% Similarity=0.261 Sum_probs=43.9
Q ss_pred CCCchhHHHHHHHcCCEEEEEecCCCc--cccHHHHHHHhhc--CceEEEEeCCCCCc---ccc-----cCHHHHHHHHH
Q psy10210 232 TTAHPAFDKAANYFGMKVKHIRLTSSY--TVDLAALQSAITG--NTVMLVGSMPNFPY---GTM-----DDIGAIAKLGE 299 (435)
Q Consensus 232 ~~~~~~~~~~~~~~g~~v~~vp~~~~~--~~d~~~l~~~i~~--~~~~v~~~~p~npt---G~~-----~~i~~i~~la~ 299 (435)
.|.+.+...+++..|+...+||+...+ .-|++.+.+++.+ .+.+.+.-.++-.+ |.. .+.+++.++.+
T Consensus 44 QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~Al~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~de~~a~g~ 123 (130)
T COG3453 44 QPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRALDEAEGPVLAYCRSGTRSLNLYGLGELDGGMSRDEIEALGQ 123 (130)
T ss_pred CCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHHHHHhCCCEEeeecCCchHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 456667888899999999999996322 3467778888874 45554433332111 111 34556666666
Q ss_pred HcCC
Q psy10210 300 KYGI 303 (435)
Q Consensus 300 ~~~~ 303 (435)
.+|+
T Consensus 124 a~G~ 127 (130)
T COG3453 124 AAGF 127 (130)
T ss_pred hhCc
Confidence 5553
No 420
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=56.56 E-value=1.3e+02 Score=28.75 Aligned_cols=87 Identities=13% Similarity=0.074 Sum_probs=51.9
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++-.|+|..+..+|..+-+ .|+ +-.|++|+..-..-....+.+|++++.++-+.+..--.+..++...++..
T Consensus 59 ~vv~aSsGN~g~alA~~a~~------~Gl-~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~~~~~~~~~a~~~~~~~~~ 131 (298)
T TIGR01139 59 TIVEPTSGNTGIALAMVAAA------RGY-KLILTMPETMSIERRKLLKAYGAELVLTPGAEGMKGAIAKAEEIAASTPN 131 (298)
T ss_pred EEEEeCCChhHHHHHHHHHH------cCC-eEEEEeCCccCHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 47777888999888887653 222 23578887766777888899999999887431110012233333333332
Q ss_pred -EEEEeCCCCCcccc
Q psy10210 275 -MLVGSMPNFPYGTM 288 (435)
Q Consensus 275 -~v~~~~p~nptG~~ 288 (435)
.++++...||.+..
T Consensus 132 ~~~~~~~~~n~~~~~ 146 (298)
T TIGR01139 132 SYFMLQQFENPANPE 146 (298)
T ss_pred cEEcccccCCcccHH
Confidence 33455555665433
No 421
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=56.36 E-value=87 Score=31.01 Aligned_cols=77 Identities=18% Similarity=0.132 Sum_probs=46.2
Q ss_pred CchhHHHHHHHcCCEEEEEecCCCcc-ccHHHHHHHhh-----cCceEEEEeCC--CCCcc-cc-cCHHHHHHHHHHcCC
Q psy10210 234 AHPAFDKAANYFGMKVKHIRLTSSYT-VDLAALQSAIT-----GNTVMLVGSMP--NFPYG-TM-DDIGAIAKLGEKYGI 303 (435)
Q Consensus 234 ~~~~~~~~~~~~g~~v~~vp~~~~~~-~d~~~l~~~i~-----~~~~~v~~~~p--~nptG-~~-~~i~~i~~la~~~~~ 303 (435)
.+..+.+.+...|. ++.+ .+|. .++++++.++. .+..++++..+ ++|+- .- -++..|..+-+++++
T Consensus 213 ~n~~LL~~~a~~gk-PVil---k~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~ 288 (360)
T PRK12595 213 QNFELLKAAGRVNK-PVLL---KRGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHL 288 (360)
T ss_pred cCHHHHHHHHccCC-cEEE---eCCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCC
Confidence 44455555555553 3333 3343 57787777664 24444444313 23322 22 489999999888999
Q ss_pred cEEEeccccch
Q psy10210 304 PVHVDCCLGGF 314 (435)
Q Consensus 304 ~livD~~~~~~ 314 (435)
++++|..|+++
T Consensus 289 PV~~d~~Hs~G 299 (360)
T PRK12595 289 PVMVDVTHSTG 299 (360)
T ss_pred CEEEeCCCCCc
Confidence 99999988654
No 422
>PRK08329 threonine synthase; Validated
Probab=56.32 E-value=91 Score=30.63 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=54.4
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++..|+|..+..+|..+.+. |+ +..|++|...-..-....+.+|++++.++-+ + .+.....+.+.++..
T Consensus 106 ~vv~aSsGN~g~alA~~aa~~------G~-~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~--~-~~~~~~a~~l~~~~~ 175 (347)
T PRK08329 106 EVVIDSSGNAALSLALYSLSE------GI-KVHVFVSYNASKEKISLLSRLGAELHFVEGD--R-MEVHEEAVKFSKRNN 175 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHc------CC-cEEEEECCCChHHHHHHHHHcCCEEEEECCC--H-HHHHHHHHHHHHhcC
Confidence 577778888888888776542 11 1347777766555677788899999988742 1 112112122222223
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210 275 MLVGSMPNFPYGTMDDIGAIAKLGEKYG 302 (435)
Q Consensus 275 ~v~~~~p~nptG~~~~i~~i~~la~~~~ 302 (435)
..++....||.+.-....-..|++++.+
T Consensus 176 ~~~~~~~~np~~~eG~~t~~~Ei~eql~ 203 (347)
T PRK08329 176 IPYVSHWLNPYFLEGTKTIAYEIYEQIG 203 (347)
T ss_pred CeeccCCCCchhhccchhHHHHHHHHcC
Confidence 3444444455544333333445555554
No 423
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=55.82 E-value=1.4e+02 Score=27.16 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=41.8
Q ss_pred CCEEEEEecCCCccccHHHHH---HHhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEeccccch
Q psy10210 246 GMKVKHIRLTSSYTVDLAALQ---SAITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDCCLGGF 314 (435)
Q Consensus 246 g~~v~~vp~~~~~~~d~~~l~---~~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~~~~~~ 314 (435)
+-.++++|+. |.-.+++++ ++..++-. . --|||-+ +++++|.++|.+.|+.-+.=-+|+..
T Consensus 149 ~~SiKffPM~--Gl~~leE~~avA~aca~~g~--~----lEPTGGIdl~Nf~~I~~i~ldaGv~kviPHIYssi 214 (236)
T TIGR03581 149 GSSVKFFPMG--GLKHLEEYAAVAKACAKHGF--Y----LEPTGGIDLDNFEEIVQIALDAGVEKVIPHVYSSI 214 (236)
T ss_pred CCeeeEeecC--CcccHHHHHHHHHHHHHcCC--c----cCCCCCccHHhHHHHHHHHHHcCCCeeccccceec
Confidence 4478888986 222344443 34333332 2 2679988 89999999999999998888887643
No 424
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=54.01 E-value=1.1e+02 Score=29.12 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=40.1
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
.++..++|..+..+|..+.. .|+ +-.|++|...-..-....+.+|++++.++-+
T Consensus 61 ~vv~aSsGN~g~alA~~a~~------~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 61 VLIEATSGNTGIALAMIAAL------KGY-RMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEEEECCChHHHHHHHHHHH------cCC-eEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 57778888989888886643 222 2347777777777788899999999998743
No 425
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=53.50 E-value=71 Score=29.38 Aligned_cols=98 Identities=16% Similarity=0.105 Sum_probs=53.0
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++..++|..+..++..+-. .+- +-.++++...-......++.+|++++.++-+ +.-.....++...++..
T Consensus 52 ~vv~~ssGN~g~alA~~a~~-~g~------~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~--~~~~~~~a~~~~~~~~~ 122 (244)
T cd00640 52 VIIESTGGNTGIALAAAAAR-LGL------KCTIVMPEGASPEKVAQMRALGAEVVLVPGD--FDDAIALAKELAEEDPG 122 (244)
T ss_pred EEEEeCCcHHHHHHHHHHHH-cCC------CEEEEECCCCCHHHHHHHHHCCCEEEEECCC--HHHHHHHHHHHHHhCCC
Confidence 45555667777776665543 222 2346777777666777888899999888743 21112223333333345
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 275 MLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 275 ~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
.+++...+||.+......--.|++++.
T Consensus 123 ~~~~~~~~n~~~~~g~~~~~~Ei~~q~ 149 (244)
T cd00640 123 AYYVNQFDNPANIAGQGTIGLEILEQL 149 (244)
T ss_pred CEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 555554466654443222223444443
No 426
>PF14654 Epiglycanin_C: Mucin, catalytic, TM and cytoplasmic tail region
Probab=53.50 E-value=20 Score=27.80 Aligned_cols=23 Identities=35% Similarity=0.631 Sum_probs=18.5
Q ss_pred cCCCchHHHHHHHHHHHHHHHHH
Q psy10210 21 VNKEPWQIVAMTTASVLTTVYVY 43 (435)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~ 43 (435)
..++||.|+++|+.++++.+-+.
T Consensus 13 GsL~PWeIfLItLasVvvavGl~ 35 (106)
T PF14654_consen 13 GSLKPWEIFLITLASVVVAVGLF 35 (106)
T ss_pred CCccchHHHHHHHHHHHHHHHHH
Confidence 35789999999999988865543
No 427
>PRK07476 eutB threonine dehydratase; Provisional
Probab=53.49 E-value=2e+02 Score=27.90 Aligned_cols=96 Identities=14% Similarity=0.036 Sum_probs=53.7
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceE
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVM 275 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~ 275 (435)
++..++|..+..+|+.+.. .|++ ..|++++..-..-....+.+|++++.++-+ +.--.+..++...++ ..
T Consensus 70 vv~aSsGN~g~alA~~a~~------~G~~-~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~--~~~~~~~a~~~~~~~-g~ 139 (322)
T PRK07476 70 VVTASTGNHGRALAYAARA------LGIR-ATICMSRLVPANKVDAIRALGAEVRIVGRS--QDDAQAEVERLVREE-GL 139 (322)
T ss_pred EEEECCChHHHHHHHHHHH------hCCC-EEEEeCCCCCHHHHHHHHHcCCEEEEECCC--HHHHHHHHHHHHHhc-CC
Confidence 6777888888888876643 2221 347777776667778889999999988732 211123333333332 23
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 276 LVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 276 v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
.++...+||...-..-.--.|++++.
T Consensus 140 ~~~~~~~n~~~~~g~~t~~~Ei~~Q~ 165 (322)
T PRK07476 140 TMVPPFDDPRIIAGQGTIGLEILEAL 165 (322)
T ss_pred EEeCCCCCcceeechhHHHHHHHHhC
Confidence 44443445543322222334455544
No 428
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=53.28 E-value=1.4e+02 Score=27.66 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhh-hcCCCCCeEEEeCCCchhHHHHHHHcCCEEE
Q psy10210 172 GVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYARE-EKGISLPEIVLPTTAHPAFDKAANYFGMKVK 250 (435)
Q Consensus 172 ~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~-~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~ 250 (435)
....+...+.+.++++. |...-.+..+ .+....-+..+...... ....++..+++.. +++.-.++.+|+++.
T Consensus 100 ~~~~~~~~Ia~~L~~~~---P~~~~~y~~N-~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h---~~~~Y~~~~~gl~~~ 172 (256)
T PF01297_consen 100 NAKKMAEAIADALSELD---PANKDYYEKN-AEKYLKELDELDAEIKEKLAKLPGRPVVVYH---DAFQYFAKRYGLKVI 172 (256)
T ss_dssp HHHHHHHHHHHHHHHHT---GGGHHHHHHH-HHHHHHHHHHHHHHHHHHHTTSSGGEEEEEE---STTHHHHHHTT-EEE
T ss_pred HHHHHHHHHHHHHHHhC---ccchHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCeEEEEC---hHHHHHHHhcCCcee
Confidence 44556666666666653 3211122222 12222222233222211 1233444566654 445567788999987
Q ss_pred EEe-cCCCccccHHHHHHHh---hc-CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 251 HIR-LTSSYTVDLAALQSAI---TG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 251 ~vp-~~~~~~~d~~~l~~~i---~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
.+- ..++..+.++++.+.+ .+ +.++|+.....+ . +.+..++++.|+.++.
T Consensus 173 ~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~~-~------~~~~~la~~~g~~vv~ 227 (256)
T PF01297_consen 173 GVIEISPGEEPSPKDLAELIKLIKENKVKCIFTEPQFS-S------KLAEALAKETGVKVVY 227 (256)
T ss_dssp EEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEETTS--T------HHHHHHHHCCT-EEEE
T ss_pred eeeccccccCCCHHHHHHHHHHhhhcCCcEEEecCCCC-h------HHHHHHHHHcCCcEEE
Confidence 776 3345556666665554 33 566666654322 2 3445568888887743
No 429
>PRK02991 D-serine dehydratase; Provisional
Probab=53.17 E-value=2.2e+02 Score=29.06 Aligned_cols=52 Identities=10% Similarity=0.006 Sum_probs=38.9
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp 253 (435)
.++..|+|..+..+|..+-.. +- +-.|++|...-..-.+..+.+|++++.++
T Consensus 159 ~VV~aSsGN~G~alA~aA~~~-G~------~~tIvvP~~a~~~K~~~ir~~GAeVi~~~ 210 (441)
T PRK02991 159 SIAVGSTGNLGLSIGIMSAAL-GF------KVTVHMSADARQWKKDKLRSHGVTVVEYE 210 (441)
T ss_pred EEEEECCcHHHHHHHHHHHHc-CC------CEEEEECCCCCHHHHHHHHhCCCEEEEEC
Confidence 367778888888888766431 21 23588888877778888999999998876
No 430
>PRK11761 cysM cysteine synthase B; Provisional
Probab=52.69 E-value=1.5e+02 Score=28.40 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=39.7
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++..|+|..+..+|..+.. .|+ +-.|++|+..-..-....+.+|++++.++.
T Consensus 65 ~vv~aSsGN~g~alA~~a~~------~G~-~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 65 TLIEATSGNTGIALAMIAAI------KGY-RMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEEeCCChHHHHHHHHHHH------cCC-CEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 57888899999988887653 222 234777776666778888999999999984
No 431
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=52.57 E-value=1.6e+02 Score=28.47 Aligned_cols=96 Identities=20% Similarity=0.150 Sum_probs=51.7
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++..++|..+..+|..+.. .|+ +-.|+++...-..-.+..+.+|++++.++-+ +.--.+..++...++
T Consensus 72 ~vv~~SsGN~g~alA~~a~~------~G~-~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~--~~~~~~~a~~~~~~~-- 140 (324)
T cd01563 72 AVACASTGNTSASLAAYAAR------AGI-KCVVFLPAGKALGKLAQALAYGATVLAVEGN--FDDALRLVRELAEEN-- 140 (324)
T ss_pred EEEEeCCCHHHHHHHHHHHH------cCC-ceEEEEeCCCCHHHHHHHHHcCCEEEEECCc--HHHHHHHHHHHHHhc--
Confidence 56666788888887754432 222 1347777766455667788899999888632 211122233333333
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 275 MLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 275 ~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
.+++...+||.+......--.|++++.
T Consensus 141 ~~~~~~~~n~~~~~g~~t~~~Ei~~q~ 167 (324)
T cd01563 141 WIYLSNSLNPYRLEGQKTIAFEIAEQL 167 (324)
T ss_pred CeeccCCCCcceecchhhhHHHHHHHc
Confidence 455554455554332222233455444
No 432
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=52.44 E-value=43 Score=33.41 Aligned_cols=81 Identities=21% Similarity=0.213 Sum_probs=49.8
Q ss_pred EEEeCCCchhHHHHH-HHcCCEEEEEecCCCcc-ccHHHHHHHhhc---CceEEEEeCCCCCcccccCHHHHHHHHHHcC
Q psy10210 228 IVLPTTAHPAFDKAA-NYFGMKVKHIRLTSSYT-VDLAALQSAITG---NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG 302 (435)
Q Consensus 228 viv~~~~~~~~~~~~-~~~g~~v~~vp~~~~~~-~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~i~~i~~la~~~~ 302 (435)
-++.+++++...+.= ...+=++..++..+.+. .+.+.+.+.+.. +..++++|-.. -|...+.+.+.++|++.|
T Consensus 94 ~l~~~~~r~T~~K~Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~--KG~L~~~q~~I~~ar~~~ 171 (467)
T COG2870 94 DLLRDKNRPTIVKLRVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDYA--KGVLTNVQKMIDLAREAG 171 (467)
T ss_pred ceEeecCCCceeeeeeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEeccc--cccchhHHHHHHHHHHcC
Confidence 355556666543321 11123555555543232 334444444432 56677777543 688989999999999999
Q ss_pred CcEEEecc
Q psy10210 303 IPVHVDCC 310 (435)
Q Consensus 303 ~~livD~~ 310 (435)
+++.+|--
T Consensus 172 ~pVLvDPK 179 (467)
T COG2870 172 IPVLVDPK 179 (467)
T ss_pred CcEEECCC
Confidence 99999964
No 433
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=52.13 E-value=67 Score=29.36 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=53.0
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC-----Cch----hHHHHHHHcCCEEEEEecCCCccccHHHHH
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT-----AHP----AFDKAANYFGMKVKHIRLTSSYTVDLAALQ 266 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~-----~~~----~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~ 266 (435)
+++-|||-.+...+.++..+ .+. ... --+++.. .|. -....++..|+.++.++++.+..--.+++.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v-~~L---~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~ 78 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEV-VCL---LTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLK 78 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EE-EEE---EEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCc-cEE---EEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHH
Confidence 56779999999999888776 332 000 0012111 222 267778889999998888622223367777
Q ss_pred HHhhc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEE
Q psy10210 267 SAITG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 267 ~~i~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~li 306 (435)
+++.+ +...++ +|.+ +....+-++|.+.|+..+
T Consensus 79 ~~l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 79 EALKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HHHCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 77754 333343 5666 345667778888887654
No 434
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=52.00 E-value=22 Score=29.34 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=25.3
Q ss_pred HHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEec
Q psy10210 264 ALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 264 ~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~ 309 (435)
.+++.+..++-+++++... .+-+++.++|++++++++.=.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~t~ 112 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLRTP 112 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEEES
T ss_pred HHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEEcC
Confidence 4555666688888888765 457899999999999987543
No 435
>PRK05638 threonine synthase; Validated
Probab=51.69 E-value=2e+02 Score=29.25 Aligned_cols=52 Identities=19% Similarity=0.149 Sum_probs=38.1
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp 253 (435)
.++..|+|..+..+|..+... |+ +-.|++|...-..-....+.+|++++.++
T Consensus 114 ~vv~aSsGN~g~alA~~aa~~------G~-~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 114 GFIVASDGNAAASVAAYSARA------GK-EAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEEeCCChHHHHHHHHHHHc------CC-CEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 577778888888888876542 21 13477887766667778888999999886
No 436
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=50.77 E-value=31 Score=30.76 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=32.0
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEecc
Q psy10210 272 NTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 272 ~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~ 310 (435)
+..+|+++-++|..|.++|.+.-+++++++|+.++.=.+
T Consensus 112 ~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIgi 150 (191)
T cd01455 112 EAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIFI 150 (191)
T ss_pred CcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEEe
Confidence 346888899998899999998889999999998865433
No 437
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.28 E-value=1.2e+02 Score=23.51 Aligned_cols=70 Identities=17% Similarity=0.222 Sum_probs=42.5
Q ss_pred CchhHHHHHHHcCCEEEEEecCCCc-cccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEe
Q psy10210 234 AHPAFDKAANYFGMKVKHIRLTSSY-TVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD 308 (435)
Q Consensus 234 ~~~~~~~~~~~~g~~v~~vp~~~~~-~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD 308 (435)
.-..+...++..|.+.+.. -.+++ .-....++..+.+ +.+|++..-...+. -...+.+.|+++|++++.=
T Consensus 11 ~~~~~~~~~~~~G~~~~~h-g~~~~~~~~~~~l~~~i~~-aD~VIv~t~~vsH~---~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH-GRDGGDEKKASRLPSKIKK-ADLVIVFTDYVSHN---AMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE-ecCCCCccchhHHHHhcCC-CCEEEEEeCCcChH---HHHHHHHHHHHcCCcEEEE
Confidence 3455788888999998888 22222 2222346766643 34444332222233 3678889999999998753
No 438
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=49.79 E-value=1.4e+02 Score=24.13 Aligned_cols=60 Identities=17% Similarity=0.228 Sum_probs=37.1
Q ss_pred cCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCC--CCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 245 FGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPN--FPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 245 ~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~--nptG~~~~i~~i~~la~~~~~~liv 307 (435)
.|+.+..|++. .+|. ..+.+.+.....-++++.|+ ...+...+-..|.+.|-+|+++++.
T Consensus 44 ~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 57777777542 2343 33445555544444444443 3333356789999999999999875
No 439
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=49.41 E-value=2.4e+02 Score=26.79 Aligned_cols=72 Identities=11% Similarity=0.092 Sum_probs=43.0
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEe-cCCCccccHHHHHHHhh----cCceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIR-LTSSYTVDLAALQSAIT----GNTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp-~~~~~~~d~~~l~~~i~----~~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
+..+++ .|++|.-.++.+|+++..+- ...+..+.+.++.+.++ .+..+|+.....+ -+.+..+++
T Consensus 179 ~~~~v~---~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-------~~~~~~ia~ 248 (286)
T cd01019 179 TKPFFV---FHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFH-------PKIAETLAE 248 (286)
T ss_pred CCeEEE---ecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCC-------hHHHHHHHH
Confidence 334555 45666777899999876542 23445666776665553 3566666444322 245666777
Q ss_pred HcCCcEE
Q psy10210 300 KYGIPVH 306 (435)
Q Consensus 300 ~~~~~li 306 (435)
+.|+.+.
T Consensus 249 ~~g~~v~ 255 (286)
T cd01019 249 GTGAKVG 255 (286)
T ss_pred hcCceEE
Confidence 7776554
No 440
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=49.19 E-value=2.5e+02 Score=27.00 Aligned_cols=117 Identities=14% Similarity=0.168 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeC--CCchh--HHHHHHHcCCEEEE
Q psy10210 176 MEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPT--TAHPA--FDKAANYFGMKVKH 251 (435)
Q Consensus 176 ~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~--~~~~~--~~~~~~~~g~~v~~ 251 (435)
..+++.+..++.. .+.++++|.+-+.+....+..+.+.+.. -+|++.+ |.+.+ ..+..+.+|+.+..
T Consensus 105 a~~~ia~~~a~~i---~dg~~IlTh~~S~~v~~~l~~A~~~~k~------~~V~VtESRP~~eG~~~ak~L~~~gI~~~~ 175 (301)
T COG1184 105 AKERIAEIGAERI---HDGDVILTHSFSKTVLEVLKTAADRGKR------FKVIVTESRPRGEGRIMAKELRQSGIPVTV 175 (301)
T ss_pred HHHHHHHHHHhhc---cCCCEEEEecCcHHHHHHHHHhhhcCCc------eEEEEEcCCCcchHHHHHHHHHHcCCceEE
Confidence 3334444444444 2237899999888888888887765531 1255544 45555 34556667887777
Q ss_pred EecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEec
Q psy10210 252 IRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 252 vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~ 309 (435)
|+- .++...+++-.+.++....-...|.+ ---..|+..|++++.|+.+=+
T Consensus 176 I~D--------sa~~~~~~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~a 228 (301)
T COG1184 176 IVD--------SAVGAFMSRVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVA 228 (301)
T ss_pred Eec--------hHHHHHHHhCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEe
Confidence 751 22333444434555555444444444 223568889999999987643
No 441
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=48.68 E-value=1.3e+02 Score=27.27 Aligned_cols=96 Identities=19% Similarity=0.260 Sum_probs=51.7
Q ss_pred EEcCChHHHHHHHHHHHHHHhhhhcCCCCCe-EEEeCC-----------CchhHHHHHHHcCCEEEEEecCCCccccHHH
Q psy10210 197 CMTSGGTESIMMACKAYRDYAREEKGISLPE-IVLPTT-----------AHPAFDKAANYFGMKVKHIRLTSSYTVDLAA 264 (435)
Q Consensus 197 ~~t~ggteai~~a~~a~~~~~~~~~g~~~~~-viv~~~-----------~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~ 264 (435)
+..|||-.|..++..+.. .+.. .. +++..+ ........|+..|+.+..++++.......+.
T Consensus 2 vl~SGGkDS~~al~~a~~-~G~~------v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~~~ 74 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE-EGHE------VRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEVED 74 (218)
T ss_pred eeecCcHHHHHHHHHHHH-cCCE------EEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHHHH
Confidence 567899999998877765 2322 11 112111 1223567778889988888775211122333
Q ss_pred HHHHhh----cCceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEE
Q psy10210 265 LQSAIT----GNTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 265 l~~~i~----~~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~li 306 (435)
+.+++. .....|+ +|.+ .....+-++|.+.|+.++
T Consensus 75 l~~~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~~ 116 (218)
T TIGR03679 75 LKGALKELKREGVEGIV-------TGAIASRYQKSRIERICEELGLKVF 116 (218)
T ss_pred HHHHHHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhCCCeEE
Confidence 444442 2333443 3444 234455577777776554
No 442
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=48.23 E-value=2.1e+02 Score=25.92 Aligned_cols=93 Identities=12% Similarity=0.125 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCC--chhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-------cCc
Q psy10210 203 TESIMMACKAYRDYAREEKGISLPEIVLPTTA--HPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-------GNT 273 (435)
Q Consensus 203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~--~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-------~~~ 273 (435)
.+++...+..+.+++. .++.+.+ .......|+..|+......+-=|...|.+.+++.+. ++-
T Consensus 105 ~~~m~~vl~~l~~~gl---------~FvDS~T~~~s~a~~~A~~~gvp~~~rdvfLD~~~~~~~I~~ql~~~~~~A~~~G 175 (213)
T PF04748_consen 105 REAMRWVLEVLKERGL---------FFVDSRTTPRSVAPQVAKELGVPAARRDVFLDNDQDEAAIRRQLDQAARIARKQG 175 (213)
T ss_dssp HHHHHHHHHHHHHTT----------EEEE-S--TT-SHHHHHHHCT--EEE-SEETTST-SHHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHcCC---------EEEeCCCCcccHHHHHHHHcCCCEEeeceecCCCCCHHHHHHHHHHHHHhhhhcC
Confidence 3455555555554432 4553333 333678888899876655442122357777766664 356
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 274 VMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 274 ~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
.+|.+.+|+.. +++-+++...-.++.|+-++
T Consensus 176 ~aI~Igh~~p~--Tl~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 176 SAIAIGHPRPE--TLEALEEWLPELEAQGIELV 206 (213)
T ss_dssp EEEEEEE-SCC--HHHHHHHHHHHHHHCTEEE-
T ss_pred cEEEEEcCCHH--HHHHHHHHHhHHhhCCEEEE
Confidence 78888887654 34445555555556666553
No 443
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=47.33 E-value=2.2e+02 Score=27.07 Aligned_cols=53 Identities=19% Similarity=0.155 Sum_probs=39.5
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++-+++|..+..+|..+-. .|+ +..|++|...-..-....+.+|++++.++-
T Consensus 60 ~vv~aSsGN~g~alA~~a~~------~G~-~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 112 (299)
T TIGR01136 60 TIIEATSGNTGIALAMVAAA------KGY-KLILTMPETMSLERRKLLRAYGAELILTPA 112 (299)
T ss_pred EEEEeCCChHHHHHHHHHHH------cCC-cEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 47777888888888876643 222 245888887777777888999999998874
No 444
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=46.75 E-value=99 Score=25.40 Aligned_cols=55 Identities=20% Similarity=0.219 Sum_probs=34.2
Q ss_pred CEEEEEecCCCccccHHHHHHHhhcCceEEEE--eCCCC---Ccccc---cCHHHHHHHHHHcCC
Q psy10210 247 MKVKHIRLTSSYTVDLAALQSAITGNTVMLVG--SMPNF---PYGTM---DDIGAIAKLGEKYGI 303 (435)
Q Consensus 247 ~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~--~~p~n---ptG~~---~~i~~i~~la~~~~~ 303 (435)
++++.|| -.|++|+..+.+++.+....|++ +++.+ ..|.. ..++.+.++.++.|+
T Consensus 29 vriIrvp--C~Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 29 VRIIRVP--CSGRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred eEEEEcc--CCCccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 4555555 56899999999999875544444 44433 45554 345556666666554
No 445
>PRK08638 threonine dehydratase; Validated
Probab=46.47 E-value=1e+02 Score=30.07 Aligned_cols=52 Identities=21% Similarity=0.155 Sum_probs=38.8
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp 253 (435)
.++.+++|..++.+|+.+.. .|++ ..|++|+.....-....+.+|++++.++
T Consensus 77 ~vv~~SsGN~g~alA~~aa~------~G~~-~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 77 GVVACSAGNHAQGVALSCAL------LGID-GKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred eEEEeCCcHHHHHHHHHHHH------cCCC-EEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 57777888888888887643 2221 3578888777777788899999998875
No 446
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=46.29 E-value=2.2e+02 Score=25.43 Aligned_cols=72 Identities=15% Similarity=0.087 Sum_probs=44.6
Q ss_pred CCeEEEeCC--Cchh-----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhh-cCceEEEEeCCCCCcccccCHHHHHH
Q psy10210 225 LPEIVLPTT--AHPA-----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAIT-GNTVMLVGSMPNFPYGTMDDIGAIAK 296 (435)
Q Consensus 225 ~~~viv~~~--~~~~-----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~-~~~~~v~~~~p~nptG~~~~i~~i~~ 296 (435)
+++|++..+ ..+. +...++..|.+++.+..+ +..+++.+++. .++.+|.+|.-.+. ....++++.+
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~----~p~~~l~~~~~~~~~d~v~lS~~~~~--~~~~~~~~i~ 155 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRD----VPPEEFVEAVKEHKPDILGLSALMTT--TMGGMKEVIE 155 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEeccccc--cHHHHHHHHH
Confidence 455665544 2333 344556679998776643 45677777665 46777777765433 2566788888
Q ss_pred HHHHcC
Q psy10210 297 LGEKYG 302 (435)
Q Consensus 297 la~~~~ 302 (435)
..++.+
T Consensus 156 ~lr~~~ 161 (201)
T cd02070 156 ALKEAG 161 (201)
T ss_pred HHHHCC
Confidence 887763
No 447
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=45.35 E-value=1.9e+02 Score=25.92 Aligned_cols=43 Identities=14% Similarity=0.082 Sum_probs=31.2
Q ss_pred HHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEec
Q psy10210 263 AALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 263 ~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~ 309 (435)
..++...+++-.++++++ +|...++.++++.|+++|+++|.=-
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~IT 143 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALT 143 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 344444555666777766 5667789999999999999887533
No 448
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=45.22 E-value=2.7e+02 Score=26.25 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=42.1
Q ss_pred CCeEEEeCCCchhHHHHHHHcCCEEEEEe-cCCCccccHHHHHHHh---hc-CceEEEEeCCCCCcccccCHHHHHHHHH
Q psy10210 225 LPEIVLPTTAHPAFDKAANYFGMKVKHIR-LTSSYTVDLAALQSAI---TG-NTVMLVGSMPNFPYGTMDDIGAIAKLGE 299 (435)
Q Consensus 225 ~~~viv~~~~~~~~~~~~~~~g~~v~~vp-~~~~~~~d~~~l~~~i---~~-~~~~v~~~~p~nptG~~~~i~~i~~la~ 299 (435)
+..+++. |++|.-.++.+|+++..+. ..++..+.+.++.+.+ ++ +.++|+... +.+. +.+-.+++
T Consensus 171 ~~~~v~~---H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~-~~~~------~~~~~la~ 240 (282)
T cd01017 171 GKTFVTQ---HAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEE-NASS------KIAETLAK 240 (282)
T ss_pred CCeEEEe---cccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeC-CCCh------HHHHHHHH
Confidence 3346654 5566667889999987653 2234445565555544 43 566665554 3322 33445788
Q ss_pred HcCCcEE
Q psy10210 300 KYGIPVH 306 (435)
Q Consensus 300 ~~~~~li 306 (435)
+.|+.++
T Consensus 241 ~~g~~v~ 247 (282)
T cd01017 241 ETGAKLL 247 (282)
T ss_pred HcCCcEE
Confidence 8888764
No 449
>smart00642 Aamy Alpha-amylase domain.
Probab=44.15 E-value=20 Score=31.20 Aligned_cols=28 Identities=29% Similarity=0.552 Sum_probs=25.7
Q ss_pred CcccccCHHHHHHHHHHcCCcEEEeccc
Q psy10210 284 PYGTMDDIGAIAKLGEKYGIPVHVDCCL 311 (435)
Q Consensus 284 ptG~~~~i~~i~~la~~~~~~livD~~~ 311 (435)
..|..++++++++-|+++|+.++.|-+.
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4688899999999999999999999986
No 450
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=44.03 E-value=1.8e+02 Score=24.27 Aligned_cols=58 Identities=12% Similarity=0.026 Sum_probs=35.1
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHh-hcCceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAI-TGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i-~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
+...++..|.+++.+-.+ +.++++.+++ ..++.+|.+|.-.+. ....++++.+.+++.
T Consensus 23 v~~~lr~~G~eVi~LG~~----vp~e~i~~~a~~~~~d~V~lS~~~~~--~~~~~~~~~~~L~~~ 81 (137)
T PRK02261 23 LDRALTEAGFEVINLGVM----TSQEEFIDAAIETDADAILVSSLYGH--GEIDCRGLREKCIEA 81 (137)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCcccc--CHHHHHHHHHHHHhc
Confidence 344456668888777643 3456665554 346777777765442 234567777777766
No 451
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=43.58 E-value=2.9e+02 Score=26.04 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=52.7
Q ss_pred CceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC--Cchh--HHHHHHHcCCEEEEEecCCCccccHHHHHHHh
Q psy10210 194 TCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT--AHPA--FDKAANYFGMKVKHIRLTSSYTVDLAALQSAI 269 (435)
Q Consensus 194 ~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~--~~~~--~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i 269 (435)
...++|-|-+..+..++..+...+. +-+|++.+. ...+ +.+.+...|+++..++-. .+-..+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~------~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d~--------~~~~~m 173 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGK------KFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPDS--------AVGYVM 173 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTE------EEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-GG--------GHHHHH
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCC------eEEEEEccCCcchhhhhHHHHhhhcceeEEEEech--------HHHHHH
Confidence 3678888877777777766544332 224666553 3333 223344458888888732 222333
Q ss_pred hc-CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEEEecc
Q psy10210 270 TG-NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 270 ~~-~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~livD~~ 310 (435)
.. -.+.++....-.+.|.+ ---..++-.|++++++++|=+-
T Consensus 174 ~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~~~ 218 (282)
T PF01008_consen 174 PRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVLAE 218 (282)
T ss_dssp HCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE--
T ss_pred HHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEEcc
Confidence 33 23444444444456644 3346778889999999987644
No 452
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=43.47 E-value=1.3e+02 Score=27.68 Aligned_cols=64 Identities=14% Similarity=0.109 Sum_probs=32.1
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
+.++++..|.++..++...+-....+.++..+..+..++++..+.. ....++.+.+++.|++++
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~vdgii~~~~~~-----~~~~~~i~~~~~~~ipvV 84 (273)
T cd06305 21 TKAEAEALGGDLRVYDAGGDDAKQADQIDQAIAQKVDAIIIQHGRA-----EVLKPWVKRALDAGIPVV 84 (273)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----hhhHHHHHHHHHcCCCEE
Confidence 3455666677776654322111122344555556666776654322 112333445566777654
No 453
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=43.45 E-value=1.4e+02 Score=27.04 Aligned_cols=8 Identities=13% Similarity=0.052 Sum_probs=3.1
Q ss_pred cCCEEEEE
Q psy10210 245 FGMKVKHI 252 (435)
Q Consensus 245 ~g~~v~~v 252 (435)
.|..+...
T Consensus 28 ~g~~~~~~ 35 (266)
T cd06282 28 AGYSLLLA 35 (266)
T ss_pred CCCEEEEe
Confidence 34444333
No 454
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=43.21 E-value=1.3e+02 Score=28.38 Aligned_cols=72 Identities=14% Similarity=0.236 Sum_probs=46.9
Q ss_pred EEEeCCCchh-------HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHH
Q psy10210 228 IVLPTTAHPA-------FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEK 300 (435)
Q Consensus 228 viv~~~~~~~-------~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~ 300 (435)
|++|+...+- ..+.++..|..+..+..+.+.... +.++.....+...+++....+ +.+.+.++.+.
T Consensus 6 vivp~~~npff~~ii~gIe~~a~~~Gy~l~l~~t~~~~~~e-~~i~~l~~~~vDGiI~~s~~~------~~~~l~~~~~~ 78 (279)
T PF00532_consen 6 VIVPDISNPFFAEIIRGIEQEAREHGYQLLLCNTGDDEEKE-EYIELLLQRRVDGIILASSEN------DDEELRRLIKS 78 (279)
T ss_dssp EEESSSTSHHHHHHHHHHHHHHHHTTCEEEEEEETTTHHHH-HHHHHHHHTTSSEEEEESSSC------TCHHHHHHHHT
T ss_pred EEECCCCCcHHHHHHHHHHHHHHHcCCEEEEecCCCchHHH-HHHHHHHhcCCCEEEEecccC------ChHHHHHHHHc
Confidence 7778776554 445566779999888876444333 556666667888877774322 35667777766
Q ss_pred cCCcEEE
Q psy10210 301 YGIPVHV 307 (435)
Q Consensus 301 ~~~~liv 307 (435)
+++++.
T Consensus 79 -~iPvV~ 84 (279)
T PF00532_consen 79 -GIPVVL 84 (279)
T ss_dssp -TSEEEE
T ss_pred -CCCEEE
Confidence 777664
No 455
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=43.08 E-value=1.4e+02 Score=25.76 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=48.3
Q ss_pred EEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 228 IVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 228 viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
++.....+..+..++...|.+++...-+.+-.+-+|.|+-+.+++...+++.+.. .|...+++-++++|..+++
T Consensus 61 ~Y~~a~a~~~l~~~l~~~Gf~pv~~kG~~Dv~laIDame~~~~~~iD~~vLvSgD------~DF~~Lv~~lre~G~~V~v 134 (160)
T TIGR00288 61 VLLNQYASDKLIEAVVNQGFEPIIVAGDVDVRMAVEAMELIYNPNIDAVALVTRD------ADFLPVINKAKENGKETIV 134 (160)
T ss_pred EEechhccHHHHHHHHHCCceEEEecCcccHHHHHHHHHHhccCCCCEEEEEecc------HhHHHHHHHHHHCCCEEEE
Confidence 4444456667788888889887654322222334566665555665555554443 2788888999999998887
Q ss_pred ec
Q psy10210 308 DC 309 (435)
Q Consensus 308 D~ 309 (435)
=.
T Consensus 135 ~g 136 (160)
T TIGR00288 135 IG 136 (160)
T ss_pred Ee
Confidence 44
No 456
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=41.03 E-value=1.3e+02 Score=29.43 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh-----HHHHHHHcCCEEEEEecCCC-ccccHHHHHHHhhcCceEE
Q psy10210 203 TESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA-----FDKAANYFGMKVKHIRLTSS-YTVDLAALQSAITGNTVML 276 (435)
Q Consensus 203 teai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~-----~~~~~~~~g~~v~~vp~~~~-~~~d~~~l~~~i~~~~~~v 276 (435)
|..+--..+-+.+.+.. .++....+|.+ ....++..|+.++.-+...| -.+-.++++.+..++...|
T Consensus 153 TTTIaKLA~~l~~~g~~-------VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~Dvv 225 (340)
T COG0552 153 TTTIAKLAKYLKQQGKS-------VLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVV 225 (340)
T ss_pred HhHHHHHHHHHHHCCCe-------EEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEE
Confidence 44554444444444433 34555556665 33445666877766442111 1244577888888888887
Q ss_pred EEeC---CCCCcccccCHHHHHHHHHHcC------CcEEEeccccchh
Q psy10210 277 VGSM---PNFPYGTMDDIGAIAKLGEKYG------IPVHVDCCLGGFL 315 (435)
Q Consensus 277 ~~~~---p~nptG~~~~i~~i~~la~~~~------~~livD~~~~~~~ 315 (435)
++.. -||-..-++++++|.+++++.. ++++.|+..|-=.
T Consensus 226 liDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqna 273 (340)
T COG0552 226 LIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNA 273 (340)
T ss_pred EEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhH
Confidence 7774 3555556688999999999865 6777799876543
No 457
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=40.78 E-value=46 Score=30.20 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCceEEEEeCCCCCccc-ccCHHHHHHHHHHcCCcEEEecc
Q psy10210 262 LAALQSAITGNTVMLVGSMPNFPYGT-MDDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 262 ~~~l~~~i~~~~~~v~~~~p~nptG~-~~~i~~i~~la~~~~~~livD~~ 310 (435)
.+.+++++.....++.+=.-+..+-. .+..+++.++|++|++++++++-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 67888888877666666655544433 35678999999999999998764
No 458
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=39.45 E-value=3.2e+02 Score=27.75 Aligned_cols=54 Identities=20% Similarity=0.130 Sum_probs=39.5
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecC
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~ 255 (435)
.++.+++|..+..+|..+.. .|+ +..|++|...-..-....+.+|++++.+|.+
T Consensus 64 ~vv~~ssGN~g~alA~~a~~------~G~-~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 64 TIIEPTSGNTGIGLALVAAI------KGY-KCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred EEEEeCCcHHHHHHHHHHHH------cCC-eEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 57777888888888886653 222 2357788776666777889999999998743
No 459
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=39.40 E-value=2e+02 Score=25.59 Aligned_cols=98 Identities=16% Similarity=0.299 Sum_probs=54.7
Q ss_pred eEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC-----------CchhHHHHHHHcCCEEEEEecCCCccccHHH
Q psy10210 196 GCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT-----------AHPAFDKAANYFGMKVKHIRLTSSYTVDLAA 264 (435)
Q Consensus 196 ~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~-----------~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~ 264 (435)
++..|||-.|..++..+... +....+ +++..+ ........++..|+.+..++++.+..--.++
T Consensus 3 ~v~~SGGkDS~~al~~a~~~-G~~v~~-----l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e~~~~~ 76 (194)
T cd01994 3 VALISGGKDSCYALYRALEE-GHEVVA-----LLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEEDEVED 76 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc-CCEEEE-----EEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCchHHHHH
Confidence 56779999999998887652 222000 122211 1123567778889988888764211111244
Q ss_pred HHHHhhc----CceEEEEeCCCCCcccc---cCHHHHHHHHHHcCCcEE
Q psy10210 265 LQSAITG----NTVMLVGSMPNFPYGTM---DDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 265 l~~~i~~----~~~~v~~~~p~nptG~~---~~i~~i~~la~~~~~~li 306 (435)
+.+.+.+ ....|+ +|.+ .....+-++|++.|+..+
T Consensus 77 l~~~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 77 LKELLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred HHHHHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEE
Confidence 4444432 223333 5555 335667788998887554
No 460
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=39.40 E-value=49 Score=28.81 Aligned_cols=47 Identities=26% Similarity=0.305 Sum_probs=36.7
Q ss_pred cHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcC--CcEEEecccc
Q psy10210 261 DLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYG--IPVHVDCCLG 312 (435)
Q Consensus 261 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~--~~livD~~~~ 312 (435)
|..+++++++.+...+++- +|.+.+++++.+++++.| +++|+|-+.|
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~G 60 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEG 60 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcc
Confidence 5678899998776655543 466788999999999986 6888888764
No 461
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=38.86 E-value=4.4e+02 Score=26.84 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=40.0
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++..|+|..++.+|+.+... |+ +-.|++|...-..-.+..+.+|++|+.++-
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~l------G~-~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~ 206 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAAL------GF-QVTVHMSADAKQWKKDKLRSKGVTVVEYES 206 (431)
T ss_pred eEEEECccHHHHHHHHHHHHc------CC-CEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 467778889999888877542 21 234778887777778889999999999874
No 462
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=38.76 E-value=2.7e+02 Score=26.47 Aligned_cols=53 Identities=28% Similarity=0.240 Sum_probs=36.3
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++.+++|..+..+|..+.. .|++ -.++++...-..-....+.+|++++.++.
T Consensus 67 ~iv~~ssGN~g~alA~~a~~------~G~~-~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~ 119 (304)
T cd01562 67 GVVAASAGNHAQGVAYAAKL------LGIP-ATIVMPETAPAAKVDATRAYGAEVVLYGE 119 (304)
T ss_pred cEEEECCCHHHHHHHHHHHH------cCCC-EEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 46667777878777776543 2222 34667766655567788889999998874
No 463
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=38.49 E-value=3.7e+02 Score=25.89 Aligned_cols=71 Identities=8% Similarity=0.066 Sum_probs=42.8
Q ss_pred eEEEeCCCchhHHHHHHHcCCEEEEE-ecCCCccccHHHHHHHhh---c-CceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 227 EIVLPTTAHPAFDKAANYFGMKVKHI-RLTSSYTVDLAALQSAIT---G-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 227 ~viv~~~~~~~~~~~~~~~g~~v~~v-p~~~~~~~d~~~l~~~i~---~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
.+++ .|++|.-.++.+|+++..+ ...++..+.+.++.+.++ + +.++|+...-.+ . +.+..++++-
T Consensus 205 ~~i~---~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~-~------~~~~~la~e~ 274 (311)
T PRK09545 205 GYFV---FHDAYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFR-P------AVIESVAKGT 274 (311)
T ss_pred cEEE---ECchHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCC-h------HHHHHHHHhc
Confidence 3555 5677777889999987643 233444566666655543 3 566766554333 2 4555667777
Q ss_pred CCcEEE
Q psy10210 302 GIPVHV 307 (435)
Q Consensus 302 ~~~liv 307 (435)
|+.+++
T Consensus 275 g~~v~~ 280 (311)
T PRK09545 275 SVRMGT 280 (311)
T ss_pred CCeEEE
Confidence 776543
No 464
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=38.35 E-value=3.5e+02 Score=25.63 Aligned_cols=69 Identities=12% Similarity=0.134 Sum_probs=42.4
Q ss_pred eEEEeCCCchhHHHHHHHcCCEEEEEe-cCCCccccHHHHHHHh---hc-CceEEEEeCCCCCcccccCHHHHHHHHHHc
Q psy10210 227 EIVLPTTAHPAFDKAANYFGMKVKHIR-LTSSYTVDLAALQSAI---TG-NTVMLVGSMPNFPYGTMDDIGAIAKLGEKY 301 (435)
Q Consensus 227 ~viv~~~~~~~~~~~~~~~g~~v~~vp-~~~~~~~d~~~l~~~i---~~-~~~~v~~~~p~nptG~~~~i~~i~~la~~~ 301 (435)
.+++. |++|.-.++.+|++++.+- ..++..+.+.++.+.+ .+ +.++|+.....+ . +.+..++++.
T Consensus 179 ~~v~~---H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~-~------~~~~~ia~~~ 248 (287)
T cd01137 179 KLVTS---EGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFVESTVN-D------RLMKQVAKET 248 (287)
T ss_pred EEEEe---cccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCC-h------HHHHHHHHHh
Confidence 35554 5566667889999987642 2344456666665554 43 566666554333 2 4456778888
Q ss_pred CCcE
Q psy10210 302 GIPV 305 (435)
Q Consensus 302 ~~~l 305 (435)
|+.+
T Consensus 249 gv~v 252 (287)
T cd01137 249 GAKI 252 (287)
T ss_pred CCcc
Confidence 8875
No 465
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=38.31 E-value=1.6e+02 Score=27.06 Aligned_cols=65 Identities=22% Similarity=0.242 Sum_probs=36.8
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
....++..|.++..++...+..-..+.+++++..+...+++..... +...+..+.+++.+++++.
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~dgiii~~~~~-----~~~~~~l~~~~~~~ipvV~ 85 (277)
T cd06319 21 VKSKAKALGYDAVELSAENSAKKELENLRTAIDKGVSGIIISPTNS-----SAAVTLLKLAAQAKIPVVI 85 (277)
T ss_pred HHHHHHhcCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCch-----hhhHHHHHHHHHCCCCEEE
Confidence 3345566688877665432222233455566666777776643221 1244566777788887764
No 466
>PTZ00081 enolase; Provisional
Probab=37.90 E-value=1.4e+02 Score=30.51 Aligned_cols=100 Identities=22% Similarity=0.221 Sum_probs=64.0
Q ss_pred ChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCch----hHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEE
Q psy10210 201 GGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHP----AFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVML 276 (435)
Q Consensus 201 ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~----~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v 276 (435)
++.|-+.+....+.+. |-+.+.+|.+. ++.+..+..|-++ .|-.|+.+..+++.+++.+..+.+=+
T Consensus 282 s~~eli~~~~~~l~~y---------~I~~IEDPl~~~D~eg~~~Lt~~lg~~i-~IvgDE~~~tn~~~l~~~I~~~aad~ 351 (439)
T PTZ00081 282 TGEELVELYLDLVKKY---------PIVSIEDPFDQDDWEAYAKLTAAIGQKV-QIVGDDLLVTNPTRIKKAIEKKACNA 351 (439)
T ss_pred CHHHHHHHHHHHHhcC---------CcEEEEcCCCcccHHHHHHHHHhhCCCc-eEEcCCcccCCHHHHHHHHHhCCCCE
Confidence 4455555554444322 23788888654 3555555554333 23334444567999999998765544
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHcCCcEEEeccc
Q psy10210 277 VGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCL 311 (435)
Q Consensus 277 ~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~ 311 (435)
+..-++. .|.+.+..+++++|+++|+.+++=...
T Consensus 352 i~iKvnq-iGGITe~l~~a~lA~~~Gi~~iishrs 385 (439)
T PTZ00081 352 LLLKVNQ-IGTVTEAIEAAKLAQKNGWGVMVSHRS 385 (439)
T ss_pred EEecccc-ccCHHHHHHHHHHHHHcCCcEEEeCCC
Confidence 4444444 788888999999999999988875443
No 467
>PLN02970 serine racemase
Probab=37.68 E-value=1.2e+02 Score=29.58 Aligned_cols=53 Identities=23% Similarity=0.195 Sum_probs=39.4
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++..++|..++.+|+.+.. .|+ +-.|++|+.+-..-....+.+|++++.++-
T Consensus 77 ~vv~aSsGN~g~alA~~a~~------~G~-~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~ 129 (328)
T PLN02970 77 GVVTHSSGNHAAALALAAKL------RGI-PAYIVVPKNAPACKVDAVIRYGGIITWCEP 129 (328)
T ss_pred eEEEECCcHHHHHHHHHHHH------cCC-CEEEEECCCCCHHHHHHHHhcCCEEEEeCC
Confidence 47777888888888886653 222 235788887777777778899999998874
No 468
>KOG3974|consensus
Probab=37.30 E-value=1.4e+02 Score=28.12 Aligned_cols=67 Identities=7% Similarity=0.111 Sum_probs=37.5
Q ss_pred HHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEecc
Q psy10210 242 ANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 242 ~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~ 310 (435)
.+.+--+++.-|+- ... +.+.+++.+.+-..+|+...-.-..+....+++|.+++++.++++++|+-
T Consensus 73 IKsYsPdLIVHP~l~~~~--av~~i~k~L~RlhavVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 73 IKSYSPDLIVHPVLDQEN--AVDIIEKLLQRLHAVVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred HhhcCCceeecccccCCc--hHhHHHHHHhheeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 34444444444542 111 34555555544344444332211223336688999999999999999985
No 469
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=37.28 E-value=2e+02 Score=26.52 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=33.3
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
+.+.++..|.++.....+.+..-..+.++..+..+..+|++.... + +....+.+.+++.|++++.
T Consensus 21 i~~~~~~~g~~v~~~~~~~~~~~~~~~i~~~~~~~~Dgiii~~~~-~----~~~~~~i~~~~~~~iPvV~ 85 (282)
T cd06318 21 AKAHAKALGYELISTDAQGDLTKQIADVEDLLTRGVNVLIINPVD-P----EGLVPAVAAAKAAGVPVVV 85 (282)
T ss_pred HHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCC-c----cchHHHHHHHHHCCCCEEE
Confidence 344555667777665443221112234555556666677665422 1 1123444556677877663
No 470
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=37.28 E-value=3.8e+02 Score=25.72 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC--CchhH--HHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT--AHPAF--DKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~--~~~~~--~~~~~~~g~~v~~vp~ 254 (435)
.+.+..++++. +. ++++|.|-+......++.+...+. +-+|++.+. ...+. .+.+...|+.+..++-
T Consensus 104 ~I~~~a~~~i~--~g-~~ILT~~~S~tv~~~l~~a~~~~~------~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~D 174 (301)
T TIGR00511 104 RIGEIGAKRIR--DG-DVVMTHCNSEAALSVIKTAFEQGK------DIEVIATETRPRKQGHITAKELRDYGIPVTLIVD 174 (301)
T ss_pred HHHHHHHHHcC--CC-CEEEEECCcHHHHHHHHHHHHcCC------cEEEEEecCCCcchHHHHHHHHHHCCCCEEEEeh
Confidence 34444445553 22 578887766555555554433221 234666553 34442 2333445888888762
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccc-cC--HHHHHHHHHHcCCcEEEecc
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-DD--IGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~~--i~~i~~la~~~~~~livD~~ 310 (435)
. .+-..+.+-.+.++....-...|.+ .. -..++-+|+.|+++++|=+-
T Consensus 175 s--------a~~~~m~~vd~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V~a~ 225 (301)
T TIGR00511 175 S--------AVRYFMKEVDHVVVGADAITANGALINKIGTSQLALAAREARVPFMVAAE 225 (301)
T ss_pred h--------HHHHHHHhCCEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEEEcc
Confidence 1 1122222223344434333344543 22 35678889999999987543
No 471
>PRK08813 threonine dehydratase; Provisional
Probab=37.02 E-value=2.5e+02 Score=27.67 Aligned_cols=52 Identities=23% Similarity=0.230 Sum_probs=38.1
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEe
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIR 253 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp 253 (435)
.++..|+|..+..+|..+... |+ +-.|++|...-..-...++.+|++++.++
T Consensus 83 ~VV~aSsGN~G~alA~aa~~~------Gi-~~~IvvP~~~~~~K~~~i~~~GAeVv~~g 134 (349)
T PRK08813 83 PVICASAGNHAQGVAWSAYRL------GV-QAITVMPHGAPQTKIAGVAHWGATVRQHG 134 (349)
T ss_pred eEEEECCCHHHHHHHHHHHHc------CC-CEEEEEcCCCCHHHHHHHHHcCCEEEEEC
Confidence 367778889998888866532 21 23477888777777788899999998885
No 472
>PRK00509 argininosuccinate synthase; Provisional
Probab=37.01 E-value=1.4e+02 Score=30.11 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=59.1
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEe--CCCc----hhHHHHHHHcCC-EEEEEecCCCccccHHHHHH
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLP--TTAH----PAFDKAANYFGM-KVKHIRLTSSYTVDLAALQS 267 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~--~~~~----~~~~~~~~~~g~-~v~~vp~~~~~~~d~~~l~~ 267 (435)
-++..|||-.+..++..+....+.. |+.- +... ....+.|+.+|+ +...+++.+.+ .-+-+..
T Consensus 5 Vvva~SGGlDSsvla~~l~e~lG~e--------Viavt~d~Gq~~dle~a~~~A~~lGi~~~~viD~~~ef--~~~~i~~ 74 (399)
T PRK00509 5 VVLAYSGGLDTSVIIKWLKETYGCE--------VIAFTADVGQGEELEPIREKALKSGASEIYVEDLREEF--VRDYVFP 74 (399)
T ss_pred EEEEEcCCHHHHHHHHHHHHhhCCe--------EEEEEEecCCHHHHHHHHHHHHHcCCCeEEEEcCHHHH--HHHhHHH
Confidence 4677799998888887654432332 3222 2111 124566777787 45555554222 1122234
Q ss_pred HhhcCceEEEEeCCCCCcccc----cCHHHHHHHHHHcCCcEEEecccc
Q psy10210 268 AITGNTVMLVGSMPNFPYGTM----DDIGAIAKLGEKYGIPVHVDCCLG 312 (435)
Q Consensus 268 ~i~~~~~~v~~~~p~nptG~~----~~i~~i~~la~~~~~~livD~~~~ 312 (435)
++..+.. + ...+|.+.. .-.+.+.++|++.|+-.+.|.+++
T Consensus 75 ~i~~n~~--y--~g~ypl~~~lcr~~i~~~l~~~A~~~G~~~IA~G~t~ 119 (399)
T PRK00509 75 AIRANAL--Y--EGKYPLGTALARPLIAKKLVEIARKEGADAVAHGCTG 119 (399)
T ss_pred HHHhChH--h--cCcCCCchHHHHHHHHHHHHHHHHHcCCCEEEeCCCc
Confidence 4444432 1 122333333 236789999999999999999987
No 473
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.81 E-value=2e+02 Score=24.04 Aligned_cols=60 Identities=15% Similarity=0.102 Sum_probs=42.3
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHH-HHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQ-SAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI 303 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~-~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~ 303 (435)
+...++..|.+++....+ ..++++- ++...+..+|.+|+-.. .....++++.+.+++.|+
T Consensus 21 v~~~l~~~GfeVi~LG~~----v~~e~~v~aa~~~~adiVglS~l~~--~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 21 LDHAFTNAGFNVVNLGVL----SPQEEFIKAAIETKADAILVSSLYG--HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred HHHHHHHCCCEEEECCCC----CCHHHHHHHHHHcCCCEEEEecccc--cCHHHHHHHHHHHHHCCC
Confidence 445567779999888765 3455554 45556788888887653 344678999999998875
No 474
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=35.79 E-value=93 Score=31.58 Aligned_cols=80 Identities=15% Similarity=0.188 Sum_probs=50.9
Q ss_pred EEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy10210 228 IVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI 303 (435)
Q Consensus 228 viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~ 303 (435)
+.+.+|.... +.+..+..|-. +.|-.|+....++..+++.+..+.+=++..-++ ..|.+.+..+++++|+++|+
T Consensus 281 ~~iEdPl~~~D~~~~~~L~~~~~~~-ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik~~-~iGGItea~~ia~lA~~~Gi 358 (425)
T TIGR01060 281 VSIEDGLSEEDWEGWAELTKELGDK-VQIVGDDLFVTNTEILREGIEMGVANSILIKPN-QIGTLTETLDAVELAKKAGY 358 (425)
T ss_pred EEEEcCCCcccHHHHHHHHHhcCCC-CeEEeCCCcccCHHHHHHHHHhCCCCEEEeccc-ccCCHHHHHHHHHHHHHcCC
Confidence 6788886543 33333333212 223334444446999999988765434444443 37888899999999999999
Q ss_pred cEEEec
Q psy10210 304 PVHVDC 309 (435)
Q Consensus 304 ~livD~ 309 (435)
.+++=.
T Consensus 359 ~~vv~h 364 (425)
T TIGR01060 359 TAVISH 364 (425)
T ss_pred cEEEec
Confidence 866433
No 475
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=35.74 E-value=1.1e+02 Score=25.65 Aligned_cols=57 Identities=26% Similarity=0.352 Sum_probs=39.7
Q ss_pred CccccHHHHHHHhhc-CceEEEEeCCCCCcccccC----HHHHHH-HHHHc-CCcEE-Eeccccc
Q psy10210 257 SYTVDLAALQSAITG-NTVMLVGSMPNFPYGTMDD----IGAIAK-LGEKY-GIPVH-VDCCLGG 313 (435)
Q Consensus 257 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~----i~~i~~-la~~~-~~~li-vD~~~~~ 313 (435)
+...+.+.+.+.+.+ ++..+++-.|-+..|...+ +.+.++ +.+++ +++++ +||-++.
T Consensus 35 ~~~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 35 NREKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred CCchHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 345789999999876 5788888899888888733 333333 33344 88766 8998753
No 476
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=35.42 E-value=4.2e+02 Score=25.59 Aligned_cols=115 Identities=16% Similarity=0.171 Sum_probs=59.4
Q ss_pred HHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCC--CchhH--HHHHHHcCCEEEEEec
Q psy10210 179 EVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTT--AHPAF--DKAANYFGMKVKHIRL 254 (435)
Q Consensus 179 ~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~--~~~~~--~~~~~~~g~~v~~vp~ 254 (435)
.+.+..++++. +. ++++|.|-+......+..+.+.+. +-+|++.+. ...+. .+-+...|+.+..++-
T Consensus 109 ~I~~~a~~~i~--~g-~~ILT~~~S~tv~~~l~~A~~~~k------~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D 179 (310)
T PRK08535 109 KIGEIGAKRIR--DG-DVIMTHCNSSAALSVIKTAHEQGK------DIEVIATETRPRNQGHITAKELAEYGIPVTLIVD 179 (310)
T ss_pred HHHHHHHHHcC--CC-CEEEEeCCcHHHHHHHHHHHHCCC------eEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh
Confidence 33444445542 22 578887766665555554433221 234666554 33332 2233345888888872
Q ss_pred CCCccccHHHHHHHhhcCceEEEEeCCCCCcccc-c--CHHHHHHHHHHcCCcEEEecc
Q psy10210 255 TSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM-D--DIGAIAKLGEKYGIPVHVDCC 310 (435)
Q Consensus 255 ~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~-~--~i~~i~~la~~~~~~livD~~ 310 (435)
. .+-..+.+-.+.++....-...|.+ . --..++-+|+.|+++++|=+-
T Consensus 180 s--------av~~~m~~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V~a~ 230 (310)
T PRK08535 180 S--------AVRYFMKDVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMVAAE 230 (310)
T ss_pred h--------HHHHHHHhCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEEecc
Confidence 2 1122222222344434333445544 2 235678889999999987543
No 477
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=35.18 E-value=76 Score=30.42 Aligned_cols=78 Identities=17% Similarity=0.118 Sum_probs=50.3
Q ss_pred EEeCCCchhHHHHHHH--cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 229 VLPTTAHPAFDKAANY--FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 229 iv~~~~~~~~~~~~~~--~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
+..-++|+++...-.. -.+-++.+|.+ .-++.+++.....++.+++-.-.++ .++-++|.++|+++|+.++
T Consensus 48 v~G~~~y~sv~dlp~~~~~DlAvi~vp~~----~v~~~l~e~~~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~girvl 120 (291)
T PRK05678 48 VLGLPVFNTVAEAVEATGANASVIYVPPP----FAADAILEAIDAGIDLIVCITEGIP---VLDMLEVKAYLERKKTRLI 120 (291)
T ss_pred EeCeeccCCHHHHhhccCCCEEEEEcCHH----HHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEE
Confidence 4455677777776664 45555556532 3467778877777765544433332 2333489999999999999
Q ss_pred Eeccccc
Q psy10210 307 VDCCLGG 313 (435)
Q Consensus 307 vD~~~~~ 313 (435)
==.|.|-
T Consensus 121 GPNc~Gi 127 (291)
T PRK05678 121 GPNCPGI 127 (291)
T ss_pred CCCCCcc
Confidence 8777753
No 478
>cd01575 PBP1_GntR Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding,
Probab=35.08 E-value=2.8e+02 Score=25.05 Aligned_cols=12 Identities=8% Similarity=-0.089 Sum_probs=4.9
Q ss_pred HHHcCCEEEEEe
Q psy10210 242 ANYFGMKVKHIR 253 (435)
Q Consensus 242 ~~~~g~~v~~vp 253 (435)
++..|.++...+
T Consensus 25 ~~~~g~~~~~~~ 36 (268)
T cd01575 25 LEAAGYQLLLGN 36 (268)
T ss_pred HHHcCCEEEEec
Confidence 333444444433
No 479
>PRK14101 bifunctional glucokinase/RpiR family transcriptional regulator; Provisional
Probab=34.72 E-value=6e+02 Score=27.24 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=25.9
Q ss_pred HhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 268 AITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 268 ~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
.++++..+|+++. +|...++.++++.|+++|+.++
T Consensus 512 ~l~~~DvvI~iS~----sG~t~e~i~~~~~Ak~~Ga~vI 546 (638)
T PRK14101 512 LLGKGDVIVAVSK----SGRAPELLRVLDVAMQAGAKVI 546 (638)
T ss_pred cCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCeEE
Confidence 3455666777766 4566678999999999987665
No 480
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=34.54 E-value=23 Score=33.41 Aligned_cols=31 Identities=29% Similarity=0.470 Sum_probs=27.1
Q ss_pred CCCcccccCHHHHHHHHHHcCCcEEEecccc
Q psy10210 282 NFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312 (435)
Q Consensus 282 ~nptG~~~~i~~i~~la~~~~~~livD~~~~ 312 (435)
+.-.|+.++++++++.|+++|+.|+.|-+..
T Consensus 45 d~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 45 DPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp STTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred ccccchhhhhhhhhhccccccceEEEeeecc
Confidence 3346888999999999999999999999864
No 481
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=34.23 E-value=37 Score=25.75 Aligned_cols=28 Identities=29% Similarity=0.323 Sum_probs=23.4
Q ss_pred cCHHHHHHHHHHcCCcEEEeccccchhh
Q psy10210 289 DDIGAIAKLGEKYGIPVHVDCCLGGFLA 316 (435)
Q Consensus 289 ~~i~~i~~la~~~~~~livD~~~~~~~~ 316 (435)
.--++|.++|+++|++++.|...+..++
T Consensus 27 ~~A~~I~~~A~e~~VPi~~~~~LAr~L~ 54 (82)
T TIGR00789 27 EVAERIIEIAKKHGIPIVEDPDLVDVLL 54 (82)
T ss_pred HHHHHHHHHHHHcCCCEEeCHHHHHHHH
Confidence 4468899999999999999998766554
No 482
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=33.96 E-value=26 Score=37.42 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=29.7
Q ss_pred eCCCCCcccccCHHHHHHHHHHcCCcEEEeccccch
Q psy10210 279 SMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314 (435)
Q Consensus 279 ~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~ 314 (435)
+.|+.|++..++++++++-|++.|+-||.|-++...
T Consensus 219 ~~p~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 219 TNPYDPATRIRELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred cCCCccchHHHHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 345666667789999999999999999999988543
No 483
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=33.87 E-value=1.6e+02 Score=27.91 Aligned_cols=63 Identities=19% Similarity=0.123 Sum_probs=27.1
Q ss_pred HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 239 DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 239 ~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
.+.++..|.++...+.+.+.....+.++..+..++..|++..... .......+.+++.+++++
T Consensus 21 ~~~a~~~g~~v~~~~~~~~~~~q~~~i~~l~~~~vDgIIi~~~~~-----~~~~~~l~~~~~~~iPvV 83 (302)
T TIGR02634 21 VAAAESLGAKVFVQSANGNEAKQISQIENLIARGVDVLVIIPQNG-----QVLSNAVQEAKDEGIKVV 83 (302)
T ss_pred HHHHHhcCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hHHHHHHHHHHHCCCeEE
Confidence 344444565555544332211122334444445555555543221 112334444555666554
No 484
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=33.85 E-value=2.8e+02 Score=25.28 Aligned_cols=43 Identities=9% Similarity=0.007 Sum_probs=19.7
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeC
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSM 280 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~ 280 (435)
+.+.++..|..+...+.+.+..-..+.++.++..++.++++..
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~ 63 (273)
T cd06292 21 IEAALAQYGYTVLLCNTYRGGVSEADYVEDLLARGVRGVVFIS 63 (273)
T ss_pred HHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHcCCCEEEEeC
Confidence 3444555666665554432221122334444445565555543
No 485
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=33.85 E-value=2.4e+02 Score=23.44 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=45.4
Q ss_pred CCeEEEeCC---Cchh----HHHHHHHcCCEEEEEecCCCccccHHH-HHHHhhcCceEEEEeCCCCCcccccCHHHHHH
Q psy10210 225 LPEIVLPTT---AHPA----FDKAANYFGMKVKHIRLTSSYTVDLAA-LQSAITGNTVMLVGSMPNFPYGTMDDIGAIAK 296 (435)
Q Consensus 225 ~~~viv~~~---~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~-l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~ 296 (435)
+++|++... .|.. ....++..|.+++....+ ..+++ ++.+...+..+|.+|.-. +...+.++++.+
T Consensus 2 ~~~v~~a~~g~D~Hd~g~~iv~~~l~~~GfeVi~lg~~----~s~e~~v~aa~e~~adii~iSsl~--~~~~~~~~~~~~ 75 (132)
T TIGR00640 2 RPRILVAKMGQDGHDRGAKVIATAYADLGFDVDVGPLF----QTPEEIARQAVEADVHVVGVSSLA--GGHLTLVPALRK 75 (132)
T ss_pred CCEEEEEeeCCCccHHHHHHHHHHHHhCCcEEEECCCC----CCHHHHHHHHHHcCCCEEEEcCch--hhhHHHHHHHHH
Confidence 345666555 3433 333445568888777654 23444 456666788888887654 344567889999
Q ss_pred HHHHcC
Q psy10210 297 LGEKYG 302 (435)
Q Consensus 297 la~~~~ 302 (435)
.+++.+
T Consensus 76 ~L~~~g 81 (132)
T TIGR00640 76 ELDKLG 81 (132)
T ss_pred HHHhcC
Confidence 888874
No 486
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=33.47 E-value=82 Score=25.42 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=28.3
Q ss_pred HHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEecccc
Q psy10210 262 LAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLG 312 (435)
Q Consensus 262 ~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD~~~~ 312 (435)
++.++++....++.+++... ..-+++.++|+++|+.++-..|.+
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g-------~~~~~~~~~a~~~gi~vigp~C~g 112 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG-------AESEELIEAAREAGIRVIGPNCLG 112 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT-------S--HHHHHHHHHTT-EEEESS-HH
T ss_pred HHHHHHHHHcCCCEEEEEcc-------hHHHHHHHHHHHcCCEEEeCCcce
Confidence 44455555556777766654 567899999999999999888864
No 487
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=33.20 E-value=4.1e+02 Score=24.88 Aligned_cols=77 Identities=14% Similarity=0.053 Sum_probs=45.2
Q ss_pred CchhHHHHHHHcCCEEEEEecCCCcc-ccHHHHHHHhhc-----CceEEEEeCC--CC-Ccccc-cCHHHHHHHHHHcCC
Q psy10210 234 AHPAFDKAANYFGMKVKHIRLTSSYT-VDLAALQSAITG-----NTVMLVGSMP--NF-PYGTM-DDIGAIAKLGEKYGI 303 (435)
Q Consensus 234 ~~~~~~~~~~~~g~~v~~vp~~~~~~-~d~~~l~~~i~~-----~~~~v~~~~p--~n-ptG~~-~~i~~i~~la~~~~~ 303 (435)
.+..+.+.+...|. ++.+. +|. .++++++.++.. +..++++..+ ++ |+... -++..|..+.+.+++
T Consensus 120 ~n~~LL~~~a~~gk-PVilk---~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~ 195 (260)
T TIGR01361 120 QNFELLKEVGKQGK-PVLLK---RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHL 195 (260)
T ss_pred cCHHHHHHHhcCCC-cEEEe---CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCC
Confidence 44445555555553 33333 332 367777766642 3344443322 22 33222 689999999988899
Q ss_pred cEEEeccccch
Q psy10210 304 PVHVDCCLGGF 314 (435)
Q Consensus 304 ~livD~~~~~~ 314 (435)
+++.|..|+++
T Consensus 196 pV~~ds~Hs~G 206 (260)
T TIGR01361 196 PIIVDPSHAAG 206 (260)
T ss_pred CEEEcCCCCCC
Confidence 99999988654
No 488
>PRK00077 eno enolase; Provisional
Probab=32.96 E-value=1.7e+02 Score=29.62 Aligned_cols=81 Identities=12% Similarity=0.124 Sum_probs=52.1
Q ss_pred EEEeCCCchh----HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCC
Q psy10210 228 IVLPTTAHPA----FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGI 303 (435)
Q Consensus 228 viv~~~~~~~----~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~ 303 (435)
+.+.+|..+. +.+..+..|-+ +.+-.++....++..+++.+..+.+=++..-++. .|.+.+..+++++|+++|+
T Consensus 280 ~~iEdPl~~~D~~g~~~L~~~~~~~-ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~~~-~GGitea~~ia~lA~~~gi 357 (425)
T PRK00077 280 VSIEDGLDENDWEGWKLLTEKLGDK-VQLVGDDLFVTNTKRLKKGIEKGAANSILIKVNQ-IGTLTETLDAIELAKRAGY 357 (425)
T ss_pred EEEEcCCCCccHHHHHHHHHhcCCC-CeEEcCCCccCCHHHHHHHHHhCCCCEEEeCccc-cCCHHHHHHHHHHHHHcCC
Confidence 6788886543 44444444322 2233344344479999999987654444444443 7888899999999999999
Q ss_pred cEEEecc
Q psy10210 304 PVHVDCC 310 (435)
Q Consensus 304 ~livD~~ 310 (435)
.+++=..
T Consensus 358 ~~~vsh~ 364 (425)
T PRK00077 358 TAVVSHR 364 (425)
T ss_pred eEEEeCC
Confidence 7665333
No 489
>KOG2741|consensus
Probab=32.83 E-value=1.9e+02 Score=28.38 Aligned_cols=74 Identities=12% Similarity=0.111 Sum_probs=42.8
Q ss_pred CCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCccc-ccCHHHHHHHHHHcCCcEEEeccc
Q psy10210 233 TAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGT-MDDIGAIAKLGEKYGIPVHVDCCL 311 (435)
Q Consensus 233 ~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~-~~~i~~i~~la~~~~~~livD~~~ 311 (435)
..|.+|...++.-.+.+++|+...... -+-.--++ .+-+-|++.-| .+. .++.++|.+.|+++| .++.|..+
T Consensus 59 k~y~syEeLakd~~vDvVyi~~~~~qH--~evv~l~l-~~~K~VL~EKP---la~n~~e~~~iveaA~~rg-v~~meg~~ 131 (351)
T KOG2741|consen 59 KAYGSYEELAKDPEVDVVYISTPNPQH--YEVVMLAL-NKGKHVLCEKP---LAMNVAEAEEIVEAAEARG-VFFMEGLW 131 (351)
T ss_pred ccccCHHHHhcCCCcCEEEeCCCCccH--HHHHHHHH-HcCCcEEeccc---ccCCHHHHHHHHHHHHHcC-cEEEeeee
Confidence 367888888888888888887642111 11111122 23334555554 333 377888888888887 55555554
Q ss_pred cc
Q psy10210 312 GG 313 (435)
Q Consensus 312 ~~ 313 (435)
.-
T Consensus 132 ~R 133 (351)
T KOG2741|consen 132 WR 133 (351)
T ss_pred ee
Confidence 43
No 490
>cd06309 PBP1_YtfQ_like Periplasmic binding domain of ABC-type YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.
Probab=32.22 E-value=1.7e+02 Score=26.94 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=36.7
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
+.++++..|.++...+.+.+-....+.++.++..+...+++... ++ +......+.+++++++++.
T Consensus 21 ~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~-~~----~~~~~~i~~~~~~~iPvV~ 85 (273)
T cd06309 21 IKDAAEKRGFDLKFADAQQKQENQISAIRSFIAQGVDVIILAPV-VE----TGWDPVLKEAKAAGIPVIL 85 (273)
T ss_pred HHHHHHhcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-cc----ccchHHHHHHHHCCCCEEE
Confidence 45566677888887765432222234455666667777776543 21 2223444556777877653
No 491
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=31.97 E-value=2.3e+02 Score=25.79 Aligned_cols=63 Identities=21% Similarity=0.145 Sum_probs=30.2
Q ss_pred HHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEE
Q psy10210 239 DKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVH 306 (435)
Q Consensus 239 ~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~li 306 (435)
.+.++..|.++...+.+.+-....+.++.++..+..++++...+. +...+..+.+++.+++++
T Consensus 22 ~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~-----~~~~~~~~~~~~~~ipvV 84 (267)
T cd06322 22 KEEAKKQKVNLIVSIANQDLNKQLSDVEDFITKKVDAIVLSPVDS-----KGIRAAIAKAKKAGIPVI 84 (267)
T ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCh-----hhhHHHHHHHHHCCCCEE
Confidence 344555577765554332111123344455556676666653321 112333444566777554
No 492
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=31.96 E-value=35 Score=35.90 Aligned_cols=35 Identities=29% Similarity=0.507 Sum_probs=29.9
Q ss_pred CCCCCcccccCHHHHHHHHHHcCCcEEEeccccch
Q psy10210 280 MPNFPYGTMDDIGAIAKLGEKYGIPVHVDCCLGGF 314 (435)
Q Consensus 280 ~p~nptG~~~~i~~i~~la~~~~~~livD~~~~~~ 314 (435)
.++...|+.++++++++.|+++|+-||.|-++..+
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~ 185 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHF 185 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCC
Confidence 34556788899999999999999999999987643
No 493
>PRK07048 serine/threonine dehydratase; Validated
Probab=31.92 E-value=2.4e+02 Score=27.25 Aligned_cols=53 Identities=26% Similarity=0.196 Sum_probs=36.9
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEec
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRL 254 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~ 254 (435)
.++..++|..+..+|..+.. .|+ +..|+++...-..-....+.+|++++.++-
T Consensus 74 ~vv~aSsGN~g~alA~~a~~------~G~-~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~ 126 (321)
T PRK07048 74 GVVTFSSGNHAQAIALSARL------LGI-PATIVMPQDAPAAKVAATRGYGGEVVTYDR 126 (321)
T ss_pred cEEEeCCCHHHHHHHHHHHH------cCC-CEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 46666777888777775542 222 234778877766677778899999999973
No 494
>PRK10494 hypothetical protein; Provisional
Probab=31.83 E-value=97 Score=29.10 Aligned_cols=72 Identities=13% Similarity=-0.043 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchh-HHHHHHHcCCEEEEEecC
Q psy10210 177 EAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPA-FDKAANYFGMKVKHIRLT 255 (435)
Q Consensus 177 e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~-~~~~~~~~g~~v~~vp~~ 255 (435)
|+++.+..+.-+|.+++ ++++-+-+..-...+..+..--+. ++.++|++..|-. ....++..|++++..|+|
T Consensus 138 EA~~~~~~l~~lGVp~~-~Ii~e~~s~nT~eNa~~~~~~~~~------~~iiLVTsa~Hm~RA~~~f~~~Gl~v~p~Ptd 210 (259)
T PRK10494 138 TAEVGARVAQSLGVPRE-DIITLDLPKDTEEEAAAVKQAIGD------APFLLVTSASHLPRAMIFFQQEGLNPLPAPAN 210 (259)
T ss_pred HHHHHHHHHHHcCCCHH-HeeeCCCCCCHHHHHHHHHHHhCC------CCEEEECCHHHHHHHHHHHHHcCCceeecCCc
Confidence 44555555556677665 555543333333333322211111 2346777766655 345567779999888875
No 495
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=31.81 E-value=1.2e+02 Score=24.37 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=38.8
Q ss_pred ccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEEe
Q psy10210 258 YTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHVD 308 (435)
Q Consensus 258 ~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~livD 308 (435)
-.++++++++.+.+++-.+++-.+. +|.+.-.++..+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee~~E~ivvGTG~--~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEEGPEVIVVGTGQ--SGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhcCCcEEEEecCc--eeEEEeCHHHHHHHHhcCCeEEEe
Confidence 3689999999999888666654443 688888899999999999777753
No 496
>PRK06450 threonine synthase; Validated
Probab=31.81 E-value=4e+02 Score=26.04 Aligned_cols=77 Identities=19% Similarity=0.100 Sum_probs=48.3
Q ss_pred ceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCce
Q psy10210 195 CGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTV 274 (435)
Q Consensus 195 ~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~ 274 (435)
.++..|+|..+..+|..+.+--- +-.|++|...-..-...++.+|++++.++-+ .++..++. ++..
T Consensus 99 ~vv~aSsGN~g~slA~~aa~~G~-------~~~i~vP~~~~~~k~~~i~~~GA~vi~v~~~------~~~~~~~a-~~~g 164 (338)
T PRK06450 99 QISEDSSGNAGASIAAYGAAAGI-------EVKIFVPETASGGKLKQIESYGAEVVRVRGS------REDVAKAA-ENSG 164 (338)
T ss_pred EEEEECCcHHHHHHHHHHHHcCC-------CEEEEEcCCCCHHHHHHHHHcCCEEEEECCC------HHHHHHHH-HhcC
Confidence 57777888888888877654211 1247788776666777888899999998732 23333322 2223
Q ss_pred EEEEeCCCCCc
Q psy10210 275 MLVGSMPNFPY 285 (435)
Q Consensus 275 ~v~~~~p~npt 285 (435)
.+++.+..||.
T Consensus 165 ~~~~~~~~np~ 175 (338)
T PRK06450 165 YYYASHVLQPQ 175 (338)
T ss_pred eEeccCCCCcc
Confidence 45555556664
No 497
>cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=31.56 E-value=2.7e+02 Score=25.97 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=38.2
Q ss_pred HHHHHHHcCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
+..+++..|..+..+..+.+..-..+.++.++..++..+++... ++ +...++.+.+++.+++++.
T Consensus 21 i~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiii~~~-~~----~~~~~~l~~l~~~~ipvV~ 85 (288)
T cd01538 21 FEAALKELGAEVIVQNANGDPAKQISQIENMIAKGVDVLVIAPV-DG----EALASAVEKAADAGIPVIA 85 (288)
T ss_pred HHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecC-Ch----hhHHHHHHHHHHCCCCEEE
Confidence 45566677888887765432222234555666678887777642 21 1233455556677887764
No 498
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=31.20 E-value=2.4e+02 Score=25.90 Aligned_cols=65 Identities=20% Similarity=0.144 Sum_probs=34.6
Q ss_pred HHHHHHHcCCEEEEEecCCCcc--ccHHHHHHHhhcCceEEEEeCCCCCcccccCHHHHHHHHHHcCCcEEE
Q psy10210 238 FDKAANYFGMKVKHIRLTSSYT--VDLAALQSAITGNTVMLVGSMPNFPYGTMDDIGAIAKLGEKYGIPVHV 307 (435)
Q Consensus 238 ~~~~~~~~g~~v~~vp~~~~~~--~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~i~~i~~la~~~~~~liv 307 (435)
+.++++..|.++.....+.... ...+.++.++..+..++++....+ +.+.+..+.+++++++++.
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV~ 87 (275)
T cd06320 21 YENEAKKLGVSVDIQAAPSEGDQQGQLSIAENMINKGYKGLLFSPISD-----VNLVPAVERAKKKGIPVVN 87 (275)
T ss_pred HHHHHHHhCCeEEEEccCCCCCHHHHHHHHHHHHHhCCCEEEECCCCh-----HHhHHHHHHHHHCCCeEEE
Confidence 4455666788877665432111 112345555666777766543221 1123344566778887763
No 499
>PRK08246 threonine dehydratase; Provisional
Probab=31.19 E-value=3.4e+02 Score=26.05 Aligned_cols=104 Identities=19% Similarity=0.138 Sum_probs=0.0
Q ss_pred CCCCcChhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCCCchhHHHHHHH
Q psy10210 165 LHPDIFPGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYAREEKGISLPEIVLPTTAHPAFDKAANY 244 (435)
Q Consensus 165 ~~~~~~~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~~~~~g~~~~~viv~~~~~~~~~~~~~~ 244 (435)
++|.-+-..+.....+..... +...++..++|..++.+|..+....-.. .|+++...-.......+.
T Consensus 46 ~nptGS~K~R~a~~~~~~~~~------~~~~vv~aSsGN~g~a~A~~a~~~G~~~-------~iv~p~~~~~~k~~~~~~ 112 (310)
T PRK08246 46 LQHTGSFKARGAFNRLLAAPV------PAAGVVAASGGNAGLAVAYAAAALGVPA-------TVFVPETAPPAKVARLRA 112 (310)
T ss_pred CCCCCCCHHHHHHHHHHhhcc------cCCeEEEeCCCHHHHHHHHHHHHcCCCE-------EEEECCCCcHHHHHHHHH
Q ss_pred cCCEEEEEecCCCccccHHHHHHHhhcCceEEEEeCCCCC
Q psy10210 245 FGMKVKHIRLTSSYTVDLAALQSAITGNTVMLVGSMPNFP 284 (435)
Q Consensus 245 ~g~~v~~vp~~~~~~~d~~~l~~~i~~~~~~v~~~~p~np 284 (435)
+|++++.++ .++.--.+..++...++ ...++...+||
T Consensus 113 ~GA~V~~~~--~~~~~~~~~a~~~~~~~-g~~~~~~~~n~ 149 (310)
T PRK08246 113 LGAEVVVVG--AEYADALEAAQAFAAET-GALLCHAYDQP 149 (310)
T ss_pred CCCEEEEeC--CCHHHHHHHHHHHHHhc-CCEeCCCCCCh
No 500
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=30.83 E-value=3e+02 Score=28.12 Aligned_cols=118 Identities=16% Similarity=0.146 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCceEEcCChHHHHHHHHHHHHHHh-hhhcCCCCCeEEEeCCCch---------hHHH
Q psy10210 171 PGVCKMEAEVIKMCARMFNGGPETCGCMTSGGTESIMMACKAYRDYA-REEKGISLPEIVLPTTAHP---------AFDK 240 (435)
Q Consensus 171 ~~~~~~e~~~~~~la~l~g~~~~~~~~~t~ggteai~~a~~a~~~~~-~~~~g~~~~~viv~~~~~~---------~~~~ 240 (435)
....+++..+.+.+...+..+.+ -+++-|||-.+-.++..+..... .. +..-.-.+. ....
T Consensus 233 ~~~e~l~~~l~~aV~~r~~~~~~-vg~~LSGGlDSs~iaa~a~~~~~~~~--------~~~~t~~~~~~~~~~E~~~A~~ 303 (467)
T TIGR01536 233 DLVDELRSLLEDAVKRRLVADVP-VGVLLSGGLDSSLVAAIARREAPRGP--------VHTFSIGFEGSPDFDESPYARK 303 (467)
T ss_pred HHHHHHHHHHHHHHHHHhccCCc-eEEEecCChhHHHHHHHHHHhcCCCC--------ceEEEEecCCCCCCChHHHHHH
Q ss_pred HHHHcCCEEEEEecC-CCccccHHHHHHHhhcCceEEEEeCCCCCcccc--cCHHHHHHHHHHcCCcEEEec
Q psy10210 241 AANYFGMKVKHIRLT-SSYTVDLAALQSAITGNTVMLVGSMPNFPYGTM--DDIGAIAKLGEKYGIPVHVDC 309 (435)
Q Consensus 241 ~~~~~g~~v~~vp~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~--~~i~~i~~la~~~~~~livD~ 309 (435)
.++.+|.+...+.++ ++..-++..+..... +|.... -..-.+.+.++++|+.++.+.
T Consensus 304 vA~~lg~~~~~i~~~~~~~~~~~~~~v~~~~------------~p~~~~~~~~~~~l~~~a~~~G~~vlltG 363 (467)
T TIGR01536 304 VADHLGTEHHEVLFSVEEGLDALPEVIYHLE------------DPTTIRASIPLYLLSKLAREDGVKVVLSG 363 (467)
T ss_pred HHHHhCCcCeEEECCHHHHHHHHHHHHHhhC------------CCCCCchHHHHHHHHHHHHhcCCEEEEec
Done!